BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 014200
         (429 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|356549743|ref|XP_003543250.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Glycine
           max]
          Length = 583

 Score =  621 bits (1602), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 309/407 (75%), Positives = 359/407 (88%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAAR SGSLNLSNRSL ++P+EVY+N +  G  DKWWEA +LQKLILAHN+I  L
Sbjct: 1   MDRILKAARASGSLNLSNRSLTEIPDEVYRNLEGLGGDDKWWEAAELQKLILAHNSIASL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           KEDLRNLP L+VLN+SHN LS+LPAAIGEL  LK LDVSFNSI+KIP+EIGSA +LVK D
Sbjct: 61  KEDLRNLPFLSVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSIVKIPEEIGSAVSLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CS+N+L ELPSSLGRCL LSD K SNN IT+LPEDLA+CSK+SKLD+EGN+LTV+S NLI
Sbjct: 121 CSNNRLTELPSSLGRCLELSDLKGSNNLITNLPEDLANCSKLSKLDMEGNRLTVMSENLI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           +SWTMLTE  +SKNLLNG+P +IG LSRLIRLDLHQNRI +IPSSI GC SL E Y+GNN
Sbjct: 181 SSWTMLTEFNSSKNLLNGIPTSIGGLSRLIRLDLHQNRISAIPSSIIGCHSLTELYLGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            +S LP E+G LS+LGTLDLHSNQLK+Y VEAC+L L VLDLSNNSLSGLPPE+GKMTTL
Sbjct: 241 NISTLPVEIGALSRLGTLDLHSNQLKDYPVEACKLSLLVLDLSNNSLSGLPPEMGKMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           RKLLL+GNP+RTLRSSLV+GPTPALLK+LRSRL E+EDSEA TT +++ITMATRLS++SK
Sbjct: 301 RKLLLSGNPMRTLRSSLVSGPTPALLKFLRSRLSEDEDSEAVTTTKEVITMATRLSISSK 360

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           ELS+E + LSA+PSE+WE+GE+ KL+LSRNSIQELP ELSSC SLQ 
Sbjct: 361 ELSMEELGLSAVPSEVWESGEVIKLNLSRNSIQELPVELSSCVSLQT 407



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 165/352 (46%), Gaps = 51/352 (14%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N++S +P++I   H L  L +  N+I  +P EIG+ + L   D  SNQLK+ 
Sbjct: 209 LIRLDLHQNRISAIPSSIIGCHSLTELYLGNNNISTLPVEIGALSRLGTLDLHSNQLKDY 268

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT-MLTE 188
           P    + L+L     SNN ++ LP ++   + + KL + GN +  L ++L++  T  L +
Sbjct: 269 PVEACK-LSLLVLDLSNNSLSGLPPEMGKMTTLRKLLLSGNPMRTLRSSLVSGPTPALLK 327

Query: 189 LIASK-------NLLNGMPETIGSLSRL----IRLDLHQNRILSIPSSISGCCSLAEFYM 237
            + S+         +    E I   +RL      L + +  + ++PS +     + +  +
Sbjct: 328 FLRSRLSEDEDSEAVTTTKEVITMATRLSISSKELSMEELGLSAVPSEVWESGEVIKLNL 387

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIG 295
             N++  LP EL     L TL L  NQ+K++   +      LS L L NN L  +P +  
Sbjct: 388 SRNSIQELPVELSSCVSLQTLILSKNQIKDWPGSILKSLSSLSCLKLDNNPLRQIPSDGF 447

Query: 296 KMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           +M   L+ L L+GN      +SL++GP  + L YL                         
Sbjct: 448 EMVPKLQILDLSGNA-----ASLLDGPAFSSLPYL------------------------- 477

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                +EL L  M LS +PS+I    ++  LDLS+NS+Q +P  L +  SLQ
Sbjct: 478 -----QELYLRRMRLSEVPSDIVGLHQLRILDLSQNSLQSIPVGLKALTSLQ 524



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 157/351 (44%), Gaps = 51/351 (14%)

Query: 12  GSLNLSNRSLRDVPNEVYK---------NFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           G+L+L +  L+D P E  K         N   +G   +  +   L+KL+L+ N +  L+ 
Sbjct: 256 GTLDLHSNQLKDYPVEACKLSLLVLDLSNNSLSGLPPEMGKMTTLRKLLLSGNPMRTLRS 315

Query: 63  DLRNLPLLTVLNVSHNKLSE------LPAAIGELHMLKSLDVSFN-------SIMKIPDE 109
            L + P   +L    ++LSE      +      + M   L +S          +  +P E
Sbjct: 316 SLVSGPTPALLKFLRSRLSEDEDSEAVTTTKEVITMATRLSISSKELSMEELGLSAVPSE 375

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           +  +  ++K + S N ++ELP  L  C++L     S N I   P  +             
Sbjct: 376 VWESGEVIKLNLSRNSIQELPVELSSCVSLQTLILSKNQIKDWPGSILKSLSSLSCLKLD 435

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMP-ETIGSLSRLIRLDLHQN--RILSIPSSI 226
           N                       N L  +P +    + +L  LDL  N   +L  P+  
Sbjct: 436 N-----------------------NPLRQIPSDGFEMVPKLQILDLSGNAASLLDGPA-F 471

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
           S    L E Y+    LS +P+++  L +L  LDL  N L+   V    L  L  LDLSNN
Sbjct: 472 SSLPYLQELYLRRMRLSEVPSDIVGLHQLRILDLSQNSLQSIPVGLKALTSLQELDLSNN 531

Query: 286 SLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           +++ LPPE+G +  +L+ L L GNPLR++R ++++  T A+L+YL+ +LPE
Sbjct: 532 NIAVLPPELGLLEPSLQALRLDGNPLRSIRRTVLDKGTKAVLQYLKDKLPE 582


>gi|356544024|ref|XP_003540456.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Glycine
           max]
          Length = 586

 Score =  621 bits (1602), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 311/407 (76%), Positives = 358/407 (87%), Gaps = 1/407 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGD-KWWEAVDLQKLILAHNNIEK 59
           MDR+LKAAR SGSLNLSNRSL ++P+EVY+N +  G GD KWWEAV+LQKLILAHN+I  
Sbjct: 1   MDRLLKAARASGSLNLSNRSLTEIPDEVYRNLEGLGGGDDKWWEAVELQKLILAHNSIAS 60

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           LKEDLRNLP L VLN+SHN LS+LPAAIGEL  LK LDVSFNSI+ IP+EIGSA +LVK 
Sbjct: 61  LKEDLRNLPFLAVLNLSHNSLSQLPAAIGELPQLKMLDVSFNSIVNIPEEIGSAMSLVKL 120

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           DCS+NQL ELPSSLGRCL LSD K SNN ITSLPEDLA+CSK+SKLD+EGNKLTV+S NL
Sbjct: 121 DCSNNQLTELPSSLGRCLELSDLKGSNNLITSLPEDLANCSKLSKLDMEGNKLTVISENL 180

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I+SWTMLTE  ASKNLLNG+P +IG LSRLIR+ +HQNRI +IPSSI GC SL E Y+GN
Sbjct: 181 ISSWTMLTEFNASKNLLNGIPTSIGGLSRLIRVYVHQNRISAIPSSIIGCHSLTELYLGN 240

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           N +S LP E+G LS+LGTLDLHSNQLK+Y VEAC+L L VLDLSNNSLSGLPPE+GKMTT
Sbjct: 241 NNISTLPVEIGALSRLGTLDLHSNQLKDYPVEACKLSLLVLDLSNNSLSGLPPEMGKMTT 300

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           LRKLLL+GNP+RTLRSSLV+GPTPALLK+LRSRL E+EDSEA TT +++I MATRLS+TS
Sbjct: 301 LRKLLLSGNPMRTLRSSLVSGPTPALLKFLRSRLSEDEDSEAVTTTKEVIAMATRLSITS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           KELS+EG+ LSA+PSE+WE+GE+ KL+LSRNSIQELP ELSSC SLQ
Sbjct: 361 KELSMEGLGLSAVPSEVWESGEVIKLNLSRNSIQELPVELSSCVSLQ 407



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 158/347 (45%), Gaps = 51/347 (14%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           V  N++S +P++I   H L  L +  N+I  +P EIG+ + L   D  SNQLK+ P    
Sbjct: 215 VHQNRISAIPSSIIGCHSLTELYLGNNNISTLPVEIGALSRLGTLDLHSNQLKDYPVEAC 274

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT-MLTELIASK 193
           + L+L     SNN ++ LP ++   + + KL + GN +  L ++L++  T  L + + S+
Sbjct: 275 K-LSLLVLDLSNNSLSGLPPEMGKMTTLRKLLLSGNPMRTLRSSLVSGPTPALLKFLRSR 333

Query: 194 -------NLLNGMPETIGSLSRL----IRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                    +    E I   +RL      L +    + ++PS +     + +  +  N++
Sbjct: 334 LSEDEDSEAVTTTKEVIAMATRLSITSKELSMEGLGLSAVPSEVWESGEVIKLNLSRNSI 393

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPE-IGKMTT 299
             LP EL     L TL L  NQ+KE+   +      LS L L NN L  +P +    +  
Sbjct: 394 QELPVELSSCVSLQTLILSKNQIKEWPGSILKSLSSLSCLKLDNNPLKQIPLDGFEVVPK 453

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L+ L L+GN      +SL++ P  + L YL                              
Sbjct: 454 LQILDLSGNA-----ASLLDVPAFSSLPYL------------------------------ 478

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +EL L  M LS +PS+I    ++  LDLS+NS+Q +P  L    SL+
Sbjct: 479 QELYLRRMRLSEVPSDIVGLQQLRILDLSQNSLQSIPVGLKDLTSLK 525



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 155/353 (43%), Gaps = 51/353 (14%)

Query: 12  GSLNLSNRSLRDVPNEVYK---------NFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           G+L+L +  L+D P E  K         N   +G   +  +   L+KL+L+ N +  L+ 
Sbjct: 257 GTLDLHSNQLKDYPVEACKLSLLVLDLSNNSLSGLPPEMGKMTTLRKLLLSGNPMRTLRS 316

Query: 63  DLRNLPLLTVLNVSHNKLSE------------LPAAIGELHML-KSLDVSFNSIMKIPDE 109
            L + P   +L    ++LSE            + A    L +  K L +    +  +P E
Sbjct: 317 SLVSGPTPALLKFLRSRLSEDEDSEAVTTTKEVIAMATRLSITSKELSMEGLGLSAVPSE 376

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           +  +  ++K + S N ++ELP  L  C++L     S N I   P  +             
Sbjct: 377 VWESGEVIKLNLSRNSIQELPVELSSCVSLQTLILSKNQIKEWPGSILKSLSSLSCLKLD 436

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMP-ETIGSLSRLIRLDLHQN--RILSIPSSI 226
           N                       N L  +P +    + +L  LDL  N   +L +P+  
Sbjct: 437 N-----------------------NPLKQIPLDGFEVVPKLQILDLSGNAASLLDVPA-F 472

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
           S    L E Y+    LS +P+++  L +L  LDL  N L+   V    L  L  LDLSNN
Sbjct: 473 SSLPYLQELYLRRMRLSEVPSDIVGLQQLRILDLSQNSLQSIPVGLKDLTSLKELDLSNN 532

Query: 286 SLS-GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
           ++S  LP       +L+ L L GNPLR++R ++++  T A+L+YL+ +LPE E
Sbjct: 533 NISVLLPELGLLEPSLQALRLDGNPLRSIRRTVLDRGTKAVLQYLKDKLPEQE 585


>gi|224114980|ref|XP_002316909.1| predicted protein [Populus trichocarpa]
 gi|222859974|gb|EEE97521.1| predicted protein [Populus trichocarpa]
          Length = 580

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 316/403 (78%), Positives = 354/403 (87%), Gaps = 1/403 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDR+LKAAR+SGSLNLSNRSL +VP+EVYK  D  GEG+KWWE V+LQKLILAHNNIE +
Sbjct: 1   MDRVLKAARSSGSLNLSNRSLSEVPDEVYKILDAVGEGEKWWENVELQKLILAHNNIEAI 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           KEDL+NL  LTVLNVSHNKLS LPAAIGEL MLK LDVSFN I K+PDEIGSAT+LVKFD
Sbjct: 61  KEDLKNLSQLTVLNVSHNKLSALPAAIGELPMLKLLDVSFNLIQKVPDEIGSATSLVKFD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSNQL+ELPSSLG CL LSD KASNN ITSLPEDLA CSK++K+DVEGNKL VLS NL+
Sbjct: 121 CSSNQLRELPSSLGGCLALSDLKASNNSITSLPEDLARCSKLTKVDVEGNKLKVLSGNLM 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTMLTE  ASKNLL+ +P+  GSLSRLIRLDLHQNRI +IP SI GCCSLAEFYMGNN
Sbjct: 181 ASWTMLTEFNASKNLLSDIPDNFGSLSRLIRLDLHQNRISTIPPSIMGCCSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           ALS LPAE+G LS+LGTLDLHSNQLKE   EAC+L+LS+LDLSNNSL+GLPPE+GKMTTL
Sbjct: 241 ALSTLPAEIGALSRLGTLDLHSNQLKEIPAEACKLQLSMLDLSNNSLTGLPPELGKMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKLLL GNPLRTLRSSLV+GPT  LL YLRSRL E EDS+A+T  K+DLI+M  RLSV+S
Sbjct: 301 RKLLLNGNPLRTLRSSLVSGPTATLLNYLRSRLSEGEDSKATTPAKKDLISMTARLSVSS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           KELSL+G+ LSA+PSE+WE+ EI K+DLSRNSIQELP ELS C
Sbjct: 361 KELSLQGLGLSAVPSEVWESNEIVKVDLSRNSIQELPLELSLC 403



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 145/285 (50%), Gaps = 24/285 (8%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           ++N I ++ EDL + S+++ L+V  NKL+ L    I    ML  L  S NL+  +P+ IG
Sbjct: 53  AHNNIEAIKEDLKNLSQLTVLNVSHNKLSALPAA-IGELPMLKLLDVSFNLIQKVPDEIG 111

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           S + L++ D   N++  +PSS+ GC +L++    NN++++LP +L + SKL  +D+  N+
Sbjct: 112 SATSLVKFDCSSNQLRELPSSLGGCLALSDLKASNNSITSLPEDLARCSKLTKVDVEGNK 171

Query: 265 LKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           LK     + A    L+  + S N LS +P   G ++ L +L L  N + T+  S++   +
Sbjct: 172 LKVLSGNLMASWTMLTEFNASKNLLSDIPDNFGSLSRLIRLDLHQNRISTIPPSIMGCCS 231

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAG 380
            A               E       L T+   +   S+   L L    L  IP+E  +  
Sbjct: 232 LA---------------EFYMGNNALSTLPAEIGALSRLGTLDLHSNQLKEIPAEACKL- 275

Query: 381 EITKLDLSRNSIQELPPELSSCASLQ---VKFSDLVTNKESCISG 422
           +++ LDLS NS+  LPPEL    +L+   +  + L T + S +SG
Sbjct: 276 QLSMLDLSNNSLTGLPPELGKMTTLRKLLLNGNPLRTLRSSLVSG 320



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 154/369 (41%), Gaps = 88/369 (23%)

Query: 12  GSLNLSNRSLRDVPNEVYK---------NFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           G+L+L +  L+++P E  K         N    G   +  +   L+KL+L  N +  L+ 
Sbjct: 256 GTLDLHSNQLKEIPAEACKLQLSMLDLSNNSLTGLPPELGKMTTLRKLLLNGNPLRTLRS 315

Query: 63  DLRNLPLLTVLNVSHNKLSE-------LPAAIGELHMLKSLDVSFN-------SIMKIPD 108
            L + P  T+LN   ++LSE        PA    + M   L VS          +  +P 
Sbjct: 316 SLVSGPTATLLNYLRSRLSEGEDSKATTPAKKDLISMTARLSVSSKELSLQGLGLSAVPS 375

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCL--------------------NLSDFKASNNC 148
           E+  +  +VK D S N ++ELP  L  C                     NL   K  NN 
Sbjct: 376 EVWESNEIVKVDLSRNSIQELPLELSLCCLILSRNKISDWPCAILKSLPNLICLKLDNNA 435

Query: 149 ITSLPEDLADCSKMSK-LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
           +T +P D      M + LD+ GN  ++L +   +S   L EL   +  L  +P  I SL 
Sbjct: 436 LTQIPSDGFQAVPMLQILDLSGNPASLLGHPAFSSLPHLKELYLRQVQLREIPSDILSLQ 495

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           +L  L+L QN + SIP  +    SL E  + +N +SALP ELG L               
Sbjct: 496 QLQILNLSQNSLHSIPEGLKNLTSLTELDLSDNNISALPPELGLLEP------------- 542

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                                          +L+ L L GNPLR++R ++++  T A+LK
Sbjct: 543 -------------------------------SLQALRLDGNPLRSIRRTILDRGTKAVLK 571

Query: 328 YLRSRLPEN 336
           YL  ++PE+
Sbjct: 572 YLMDKIPEH 580



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 188/413 (45%), Gaps = 74/413 (17%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA-AIGELHMLKSLDVSFNSIMK 105
           L  L  ++N+I  L EDL     LT ++V  NKL  L    +    ML   + S N +  
Sbjct: 139 LSDLKASNNSITSLPEDLARCSKLTKVDVEGNKLKVLSGNLMASWTMLTEFNASKNLLSD 198

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IPD  GS + L++ D   N++  +P S+  C +L++F   NN +++LP ++   S++  L
Sbjct: 199 IPDNFGSLSRLIRLDLHQNRISTIPPSIMGCCSLAEFYMGNNALSTLPAEIGALSRLGTL 258

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+L  +     A    L+ L  S N L G+P  +G ++ L +L L+ N + ++ SS
Sbjct: 259 DLHSNQLKEIPAE--ACKLQLSMLDLSNNSLTGLPPELGKMTTLRKLLLNGNPLRTLRSS 316

Query: 226 -ISG------------------------------------CCSLAEFYMGNNALSALPAE 248
            +SG                                      S  E  +    LSA+P+E
Sbjct: 317 LVSGPTATLLNYLRSRLSEGEDSKATTPAKKDLISMTARLSVSSKELSLQGLGLSAVPSE 376

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEA--CQLRLS-------------------VLDLSNNSL 287
           + + +++  +DL  N ++E  +E   C L LS                    L L NN+L
Sbjct: 377 VWESNEIVKVDLSRNSIQELPLELSLCCLILSRNKISDWPCAILKSLPNLICLKLDNNAL 436

Query: 288 SGLPPEIGKMTTLRKLL-LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           + +P +  +   + ++L L+GNP     +SL+  P  + L +L+         +      
Sbjct: 437 TQIPSDGFQAVPMLQILDLSGNP-----ASLLGHPAFSSLPHLKELYLRQ--VQLREIPS 489

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           D++++  +L +    L+L   +L +IP  +     +T+LDLS N+I  LPPEL
Sbjct: 490 DILSL-QQLQI----LNLSQNSLHSIPEGLKNLTSLTELDLSDNNISALPPEL 537


>gi|449431828|ref|XP_004133702.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
 gi|449478165|ref|XP_004155239.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
          Length = 583

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 310/407 (76%), Positives = 353/407 (86%), Gaps = 1/407 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAAR SGSLNLSNRSL DVP+EVY++ D     +KWWEAV+LQKLILAHNNI+ L
Sbjct: 1   MDRILKAARASGSLNLSNRSLSDVPSEVYRSLDAVQADEKWWEAVELQKLILAHNNIQLL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            E+LRNL  L VLNVSHNKLSELPAAIGEL  LK LDVSFNS+M+IPDEIGSAT+LVKFD
Sbjct: 61  SEELRNLSSLAVLNVSHNKLSELPAAIGELPALKLLDVSFNSLMRIPDEIGSATSLVKFD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSN L+ELP  LGRC +LSD KASNN I+SLP +LA+CSK++KLD+EGNKL V+S NLI
Sbjct: 121 CSSNHLQELPGGLGRCSDLSDLKASNNSISSLPVELANCSKLTKLDMEGNKLKVISKNLI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWT+LTEL ASKNLLN +PE IGSL RLIRL++ QN+I SIP SI  CC+LAE YMGNN
Sbjct: 181 ASWTLLTELNASKNLLNELPENIGSLLRLIRLNVFQNKISSIPPSIKDCCALAELYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           ++S LP E+G LS LGTLDLHSNQLKEY VEAC+L L VLDLSNNSLSGLPPEIGKMTTL
Sbjct: 241 SVSTLPVEIGALSHLGTLDLHSNQLKEYPVEACKLHLLVLDLSNNSLSGLPPEIGKMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE-DLITMATRLSVTS 359
           RKLLLTGNP+RTLRSSLV+GPTPALL++LRSRLPENE  EAS+T+  D+ITMA R+S+TS
Sbjct: 301 RKLLLTGNPIRTLRSSLVSGPTPALLRFLRSRLPENEGPEASSTQRGDVITMAARMSITS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           KELSLEG  LSA+PSE+WE+ E+ KLDLS+NS QELP ELSSC SLQ
Sbjct: 361 KELSLEGQGLSAVPSEVWESSELMKLDLSKNSFQELPVELSSCTSLQ 407



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 178/373 (47%), Gaps = 35/373 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L  + N + +L E++ +L  L  LNV  NK+S +P +I +   L  L +  NS+  +
Sbjct: 186 LTELNASKNLLNELPENIGSLLRLIRLNVFQNKISSIPPSIKDCCALAELYMGNNSVSTL 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG+ + L   D  SNQLKE P    + L+L     SNN ++ LP ++   + + KL 
Sbjct: 246 PVEIGALSHLGTLDLHSNQLKEYPVEACK-LHLLVLDLSNNSLSGLPPEIGKMTTLRKLL 304

Query: 167 VEGNKLTVLSNNLIASWT-MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           + GN +  L ++L++  T  L   + S+   N  PE   +          +  ++++ + 
Sbjct: 305 LTGNPIRTLRSSLVSGPTPALLRFLRSRLPENEGPEASST---------QRGDVITMAAR 355

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLS 283
           +S   +  E  +    LSA+P+E+ + S+L  LDL  N  +E  VE  +C   L  L LS
Sbjct: 356 MS--ITSKELSLEGQGLSAVPSEVWESSELMKLDLSKNSFQELPVELSSCT-SLQTLILS 412

Query: 284 NNSLSGLPPEIGK-MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENEDS 339
            N +   P  I K +  L  L L  NPL+ + S      +   +  L      LPE+   
Sbjct: 413 RNKIKDWPGAILKTLPNLTCLKLDNNPLKQIPSDGFQAVSKLQVLDLSGNIACLPEH--- 469

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
               T   L  +        +EL L  M L  +PS I     +  LDLS+NSIQ +P EL
Sbjct: 470 ---PTFSSLPLL--------QELYLRRMRLHEVPSSILGLKHMRILDLSQNSIQLVPEEL 518

Query: 400 SSCASL-QVKFSD 411
            + A+L ++  SD
Sbjct: 519 KNLAALTELDLSD 531



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 46/265 (17%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++    LS +P+ + E   L  LD+S NS  ++P E+ S T+L     S N++K+ P +
Sbjct: 363 LSLEGQGLSAVPSEVWESSELMKLDLSKNSFQELPVELSSCTSLQTLILSRNKIKDWPGA 422

Query: 133 LGRCL-NLSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           + + L NL+  K  NN +  +P D     SK+  LD+ GN   +  +   +S  +L EL 
Sbjct: 423 ILKTLPNLTCLKLDNNPLKQIPSDGFQAVSKLQVLDLSGNIACLPEHPTFSSLPLLQELY 482

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
                             L R+ LH+     +PSSI G   +    +  N++  +P EL 
Sbjct: 483 ------------------LRRMRLHE-----VPSSILGLKHMRILDLSQNSIQLVPEELK 519

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L+ L  LDL  N +     +   L                       +L+ L L GNPL
Sbjct: 520 NLAALTELDLSDNNISLLPPQLSLLE---------------------PSLQVLRLDGNPL 558

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPE 335
           R++R +++   T A+L YL+ +L E
Sbjct: 559 RSIRRAILEKGTKAILAYLKDKLAE 583



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 15/125 (12%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           ILK       L L N  L+ +P++ +             +AV   +++    NI  L E 
Sbjct: 423 ILKTLPNLTCLKLDNNPLKQIPSDGF-------------QAVSKLQVLDLSGNIACLPEH 469

Query: 64  --LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
               +LPLL  L +   +L E+P++I  L  ++ LD+S NSI  +P+E+ +  AL + D 
Sbjct: 470 PTFSSLPLLQELYLRRMRLHEVPSSILGLKHMRILDLSQNSIQLVPEELKNLAALTELDL 529

Query: 122 SSNQL 126
           S N +
Sbjct: 530 SDNNI 534


>gi|255575336|ref|XP_002528571.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223532015|gb|EEF33826.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 571

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 307/407 (75%), Positives = 356/407 (87%), Gaps = 2/407 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDR+LKAARTSGSLNLSNRSLR + +EVY++ D AGEG+KWWE V+LQKLILAHN+IE L
Sbjct: 1   MDRVLKAARTSGSLNLSNRSLRQL-HEVYRSSDAAGEGEKWWETVELQKLILAHNSIESL 59

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           KEDLR LP LTVLNVS+NKL+ LPAAIGEL +LKSLDVSFN I  +PDEIGSAT+LVKFD
Sbjct: 60  KEDLRLLPQLTVLNVSNNKLTALPAAIGELSLLKSLDVSFNMIQTVPDEIGSATSLVKFD 119

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSNQLKELP S+GRCL+LS+ K SNN ITS PEDLA C K++K+DVEGNKL   S NL+
Sbjct: 120 CSSNQLKELPGSVGRCLDLSELKVSNNLITSFPEDLAKCLKLTKVDVEGNKLQTFSENLM 179

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTMLTEL ASKNLL  +P+ +GSLSRLIRLD HQN+I SIP SI GCCSL EFYMGNN
Sbjct: 180 ASWTMLTELNASKNLLTCIPDNVGSLSRLIRLDFHQNKISSIPPSIKGCCSLLEFYMGNN 239

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS LPAE+G++S+L TLDLHSNQLKE+ VE C+L LSVLDLSNNSLSGLP EIG+MTTL
Sbjct: 240 LLSTLPAEIGEVSRLATLDLHSNQLKEFPVEGCKLHLSVLDLSNNSLSGLPLEIGRMTTL 299

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKLLLTGNPLRT+RSSLV+GPTPALL+YLRSRL E EDSEA+T  ++D+I MA+RLS+++
Sbjct: 300 RKLLLTGNPLRTIRSSLVSGPTPALLRYLRSRLSEGEDSEANTPPRKDVIAMASRLSIST 359

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           KEL L G+ LSA+PSE+WE+GEI K+DLS+NSIQ+LP ELSSC SLQ
Sbjct: 360 KELFLVGLGLSAVPSEVWESGEIVKVDLSKNSIQKLPVELSSCVSLQ 406



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 203/451 (45%), Gaps = 66/451 (14%)

Query: 13  SLNLSNRSLRDVPNEV-----YKNFDEAGEGDK-----WWEAVDLQKLILAHNNIEKLKE 62
           SL++S   ++ VP+E+        FD +    K         +DL +L +++N I    E
Sbjct: 94  SLDVSFNMIQTVPDEIGSATSLVKFDCSSNQLKELPGSVGRCLDLSELKVSNNLITSFPE 153

Query: 63  DLRNLPLLTVLNVSHNKLSELPA-AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           DL     LT ++V  NKL       +    ML  L+ S N +  IPD +GS + L++ D 
Sbjct: 154 DLAKCLKLTKVDVEGNKLQTFSENLMASWTMLTELNASKNLLTCIPDNVGSLSRLIRLDF 213

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
             N++  +P S+  C +L +F   NN +++LP ++ + S+++ LD+  N+L      +  
Sbjct: 214 HQNKISSIPPSIKGCCSLLEFYMGNNLLSTLPAEIGEVSRLATLDLHSNQLKEFP--VEG 271

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS-ISG------------ 228
               L+ L  S N L+G+P  IG ++ L +L L  N + +I SS +SG            
Sbjct: 272 CKLHLSVLDLSNNSLSGLPLEIGRMTTLRKLLLTGNPLRTIRSSLVSGPTPALLRYLRSR 331

Query: 229 ------------------------CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
                                     S  E ++    LSA+P+E+ +  ++  +DL  N 
Sbjct: 332 LSEGEDSEANTPPRKDVIAMASRLSISTKELFLVGLGLSAVPSEVWESGEIVKVDLSKNS 391

Query: 265 LKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGK-MTTLRKLLLTGNPLRTLRSSLVNGP 321
           +++  VE  +C + L  L LS N +   P  I K ++ L  L L  NPLR +       P
Sbjct: 392 IQKLPVELSSC-VSLQTLILSKNKIQEWPGAILKSLSNLSCLKLDNNPLRQI-------P 443

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
                     ++ +   + AS  +    +    L    +EL L  + L  +PS+I    +
Sbjct: 444 LDGFQAVSMLQILDLSGNPASVCELPPFSKLPHL----QELYLRHVQLHEVPSDILSLLQ 499

Query: 382 ITKLDLSRNSIQELPPELSSCASL-QVKFSD 411
           +  LDLSRNS+Q +P    S  SL ++  SD
Sbjct: 500 LRILDLSRNSLQSIPEGFKSLTSLTELDLSD 530



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 174/422 (41%), Gaps = 103/422 (24%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLR-NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           + + L K+ +  N ++   E+L  +  +LT LN S N L+ +P  +G L  L  LD   N
Sbjct: 157 KCLKLTKVDVEGNKLQTFSENLMASWTMLTELNASKNLLTCIPDNVGSLSRLIRLDFHQN 216

Query: 102 SIMKIPD-----------------------EIGSATALVKFDCSSNQLKELPSSLGRCLN 138
            I  IP                        EIG  + L   D  SNQLKE P   G  L+
Sbjct: 217 KISSIPPSIKGCCSLLEFYMGNNLLSTLPAEIGEVSRLATLDLHSNQLKEFPVE-GCKLH 275

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT-------------- 184
           LS    SNN ++ LP ++   + + KL + GN L  + ++L++  T              
Sbjct: 276 LSVLDLSNNSLSGLPLEIGRMTTLRKLLLTGNPLRTIRSSLVSGPTPALLRYLRSRLSEG 335

Query: 185 ---------------MLTEL-IASKNL------LNGMPETIGSLSRLIRLDLHQNRILSI 222
                          M + L I++K L      L+ +P  +     ++++DL +N I  +
Sbjct: 336 EDSEANTPPRKDVIAMASRLSISTKELFLVGLGLSAVPSEVWESGEIVKVDLSKNSIQKL 395

Query: 223 PSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSV 279
           P  +S C SL    +  N +   P A L  LS L  L L +N L++  ++  Q    L +
Sbjct: 396 PVELSSCVSLQTLILSKNKIQEWPGAILKSLSNLSCLKLDNNPLRQIPLDGFQAVSMLQI 455

Query: 280 LDLSNN--SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
           LDLS N  S+  LPP   K+  L++L L    L  + S +        L  L+ R+    
Sbjct: 456 LDLSGNPASVCELPP-FSKLPHLQELYLRHVQLHEVPSDI--------LSLLQLRI---- 502

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                                   L L   +L +IP        +T+LDLS NSI  LPP
Sbjct: 503 ------------------------LDLSRNSLQSIPEGFKSLTSLTELDLSDNSIAALPP 538

Query: 398 EL 399
           EL
Sbjct: 539 EL 540



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 98/192 (51%), Gaps = 3/192 (1%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-N 138
           LS +P+ + E   +  +D+S NSI K+P E+ S  +L     S N+++E P ++ + L N
Sbjct: 369 LSAVPSEVWESGEIVKVDLSKNSIQKLPVELSSCVSLQTLILSKNKIQEWPGAILKSLSN 428

Query: 139 LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           LS  K  NN +  +P D     S +  LD+ GN  +V      +    L EL      L+
Sbjct: 429 LSCLKLDNNPLRQIPLDGFQAVSMLQILDLSGNPASVCELPPFSKLPHLQELYLRHVQLH 488

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS-KLG 256
            +P  I SL +L  LDL +N + SIP       SL E  + +N+++ALP ELG L   L 
Sbjct: 489 EVPSDILSLLQLRILDLSRNSLQSIPEGFKSLTSLTELDLSDNSIAALPPELGFLEPSLQ 548

Query: 257 TLDLHSNQLKEY 268
            L L  N L+ Y
Sbjct: 549 ALRLDGNPLRRY 560



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 138/315 (43%), Gaps = 52/315 (16%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN SL  +P E+ +                L+KL+L  N +  ++  L + P   +L
Sbjct: 279 LDLSNNSLSGLPLEIGR-------------MTTLRKLLLTGNPLRTIRSSLVSGPTPALL 325

Query: 74  NVSHNKLSE-------LPAAIGELHMLKSLDVSFNSIM-------KIPDEIGSATALVKF 119
               ++LSE        P     + M   L +S   +         +P E+  +  +VK 
Sbjct: 326 RYLRSRLSEGEDSEANTPPRKDVIAMASRLSISTKELFLVGLGLSAVPSEVWESGEIVKV 385

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNN 178
           D S N +++LP  L  C++L     S N I   P   L   S +S L ++ N L  +  +
Sbjct: 386 DLSKNSIQKLPVELSSCVSLQTLILSKNKIQEWPGAILKSLSNLSCLKLDNNPLRQIPLD 445

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
              + +ML  L      L+G P ++  L    +L                   L E Y+ 
Sbjct: 446 GFQAVSMLQILD-----LSGNPASVCELPPFSKLP-----------------HLQELYLR 483

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +  L  +P+++  L +L  LDL  N L+        L  L+ LDLS+NS++ LPPE+G +
Sbjct: 484 HVQLHEVPSDILSLLQLRILDLSRNSLQSIPEGFKSLTSLTELDLSDNSIAALPPELGFL 543

Query: 298 -TTLRKLLLTGNPLR 311
             +L+ L L GNPLR
Sbjct: 544 EPSLQALRLDGNPLR 558



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 25/222 (11%)

Query: 2   DRILKAARTSGS---LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIE 58
           D I  A+R S S   L L    L  VP+EV             WE+ ++ K+ L+ N+I+
Sbjct: 347 DVIAMASRLSISTKELFLVGLGLSAVPSEV-------------WESGEIVKVDLSKNSIQ 393

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIP-DEIGSATAL 116
           KL  +L +   L  L +S NK+ E P AI   L  L  L +  N + +IP D   + + L
Sbjct: 394 KLPVELSSCVSLQTLILSKNKIQEWPGAILKSLSNLSCLKLDNNPLRQIPLDGFQAVSML 453

Query: 117 VKFDCSSN--QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
              D S N   + ELP    +  +L +    +  +  +P D+    ++  LD+  N L  
Sbjct: 454 QILDLSGNPASVCELP-PFSKLPHLQELYLRHVQLHEVPSDILSLLQLRILDLSRNSLQS 512

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLS---RLIRLD 213
           +      S T LTEL  S N +  +P  +G L    + +RLD
Sbjct: 513 IPEG-FKSLTSLTELDLSDNSIAALPPELGFLEPSLQALRLD 553


>gi|359493861|ref|XP_003634682.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 2
           [Vitis vinifera]
 gi|302143032|emb|CBI20327.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  605 bits (1561), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 313/408 (76%), Positives = 363/408 (88%), Gaps = 1/408 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+R LKAAR SGSLNLSNR+LR+VP+EVY++ D  GEG+KWWEAV+LQKLILAHN+IE L
Sbjct: 1   MERALKAARASGSLNLSNRALREVPDEVYRSLDAIGEGEKWWEAVELQKLILAHNDIESL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL LL+VLN+S+NKL  LPAAIGEL MLKSLD+S NSI+ IP+ IGSAT+LVK D
Sbjct: 61  REDLKNLSLLSVLNLSNNKLVHLPAAIGELPMLKSLDLSQNSIVDIPEVIGSATSLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CS+N+LK+LP+SLGRC NL + KASNNCITSLPEDLA C K+ KLDVEGNKLT+LS N+I
Sbjct: 121 CSNNKLKDLPNSLGRCSNLLELKASNNCITSLPEDLAHCLKLIKLDVEGNKLTMLSENMI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASW +LTEL AS+NLL G+PE IG LSRLIRLD HQNRI SIP+SI GCCSLAEFYMGNN
Sbjct: 181 ASWVLLTELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIPASIKGCCSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS+L AE+G LS LGTLDLHSNQLKEY VEAC+LRL VLDLSNNSLSGLPPEIG MTTL
Sbjct: 241 VLSSLTAEIGALSLLGTLDLHSNQLKEYPVEACKLRLQVLDLSNNSLSGLPPEIGMMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT-KEDLITMATRLSVTS 359
           RKL+LTGNPLRTLRSSLV+GPTPALLK+LRSRL  +EDSEA+TT KE+++TMA R+S+TS
Sbjct: 301 RKLVLTGNPLRTLRSSLVSGPTPALLKFLRSRLSTDEDSEAATTAKENVVTMAARISITS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           KELSLEGM LSA+P+++WE+ EI K+DLSRNSIQELPPEL+SC SLQ 
Sbjct: 361 KELSLEGMGLSAVPAQVWESSEIVKVDLSRNSIQELPPELTSCVSLQA 408



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 193/477 (40%), Gaps = 145/477 (30%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--NFDEAGEG--------DKWWEAVDLQKLILA 53
           ++ +A +   L+ SN  L+D+PN + +  N  E            +     + L KL + 
Sbjct: 109 VIGSATSLVKLDCSNNKLKDLPNSLGRCSNLLELKASNNCITSLPEDLAHCLKLIKLDVE 168

Query: 54  HNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD---- 108
            N +  L E++  +  LLT LN S N L+ LP  IG L  L  LD   N I  IP     
Sbjct: 169 GNKLTMLSENMIASWVLLTELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIPASIKG 228

Query: 109 -------------------EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI 149
                              EIG+ + L   D  SNQLKE P    + L L     SNN +
Sbjct: 229 CCSLAEFYMGNNVLSSLTAEIGALSLLGTLDLHSNQLKEYPVEACK-LRLQVLDLSNNSL 287

Query: 150 TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS--------------------------- 182
           + LP ++   + + KL + GN L  L ++L++                            
Sbjct: 288 SGLPPEIGMMTTLRKLVLTGNPLRTLRSSLVSGPTPALLKFLRSRLSTDEDSEAATTAKE 347

Query: 183 --WTMLTEL-IASKNL------LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
              TM   + I SK L      L+ +P  +   S ++++DL +N I  +P  ++ C SL 
Sbjct: 348 NVVTMAARISITSKELSLEGMGLSAVPAQVWESSEIVKVDLSRNSIQELPPELTSCVSLQ 407

Query: 234 EFYMG------------------------NNALSALPAE-LGKLSKLGTLDLHSN----- 263
              +                         NN L  +PA+    +SKL  LDL  N     
Sbjct: 408 ALILSRNKIQEWPGVILKSLPNLSCLKLDNNPLRQIPADGFQAVSKLQILDLSGNSASLP 467

Query: 264 ---------QLKEYCVEACQL-----------RLSVLDLSNNSL---------------- 287
                    QL+E  +   QL           +L +LDLS NSL                
Sbjct: 468 DNPAFSSLPQLQELYLRRMQLCEVPSDILSLQQLQILDLSQNSLQLIPEGFKNLTSLTEL 527

Query: 288 -------SGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
                  + LPPE+G +  +L+ L L GNPLR++R ++++  T A+LKYL+ ++PE+
Sbjct: 528 NLSDNSIATLPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPEH 584


>gi|225461397|ref|XP_002284846.1| PREDICTED: leucine-rich repeat-containing protein 40-like isoform 1
           [Vitis vinifera]
          Length = 588

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 309/411 (75%), Positives = 360/411 (87%), Gaps = 5/411 (1%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+R LKAAR SGSLNLSNR+LR+VP+EVY++ D  GEG+KWWEAV+LQKLILAHN+IE L
Sbjct: 1   MERALKAARASGSLNLSNRALREVPDEVYRSLDAIGEGEKWWEAVELQKLILAHNDIESL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL LL+VLN+S+NKL  LPAAIGEL MLKSLD+S NSI+ IP+ IGSAT+LVK D
Sbjct: 61  REDLKNLSLLSVLNLSNNKLVHLPAAIGELPMLKSLDLSQNSIVDIPEVIGSATSLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CS+N+LK+LP+SLGRC NL + KASNNCITSLPEDLA C K+ KLDVEGNKLT+LS N+I
Sbjct: 121 CSNNKLKDLPNSLGRCSNLLELKASNNCITSLPEDLAHCLKLIKLDVEGNKLTMLSENMI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASW +LTEL AS+NLL G+PE IG LSRLIRLD HQNRI SIP+SI GCCSLAEFYMGNN
Sbjct: 181 ASWVLLTELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIPASIKGCCSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS+L AE+G LS LGTLDLHSNQLKEY VEAC+LRL VLDLSNNSLSGLPPEIG MTTL
Sbjct: 241 VLSSLTAEIGALSLLGTLDLHSNQLKEYPVEACKLRLQVLDLSNNSLSGLPPEIGMMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED-----SEASTTKEDLITMATRL 355
           RKL+LTGNPLRTLRSSLV+GPTPALLK+LRSRL  +E      + A+T KE+++TMA R+
Sbjct: 301 RKLVLTGNPLRTLRSSLVSGPTPALLKFLRSRLSTDEGVFLFFTSATTAKENVVTMAARI 360

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           S+TSKELSLEGM LSA+P+++WE+ EI K+DLSRNSIQELPPEL+SC SLQ
Sbjct: 361 SITSKELSLEGMGLSAVPAQVWESSEIVKVDLSRNSIQELPPELTSCVSLQ 411



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 193/481 (40%), Gaps = 149/481 (30%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--NFDEAGEG--------DKWWEAVDLQKLILA 53
           ++ +A +   L+ SN  L+D+PN + +  N  E            +     + L KL + 
Sbjct: 109 VIGSATSLVKLDCSNNKLKDLPNSLGRCSNLLELKASNNCITSLPEDLAHCLKLIKLDVE 168

Query: 54  HNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD---- 108
            N +  L E++  +  LLT LN S N L+ LP  IG L  L  LD   N I  IP     
Sbjct: 169 GNKLTMLSENMIASWVLLTELNASRNLLTGLPENIGRLSRLIRLDFHQNRISSIPASIKG 228

Query: 109 -------------------EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI 149
                              EIG+ + L   D  SNQLKE P    + L L     SNN +
Sbjct: 229 CCSLAEFYMGNNVLSSLTAEIGALSLLGTLDLHSNQLKEYPVEACK-LRLQVLDLSNNSL 287

Query: 150 TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS--------------------------- 182
           + LP ++   + + KL + GN L  L ++L++                            
Sbjct: 288 SGLPPEIGMMTTLRKLVLTGNPLRTLRSSLVSGPTPALLKFLRSRLSTDEGVFLFFTSAT 347

Query: 183 ------WTMLTEL-IASKNL------LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
                  TM   + I SK L      L+ +P  +   S ++++DL +N I  +P  ++ C
Sbjct: 348 TAKENVVTMAARISITSKELSLEGMGLSAVPAQVWESSEIVKVDLSRNSIQELPPELTSC 407

Query: 230 CSLAEFYMG------------------------NNALSALPAE-LGKLSKLGTLDLHSN- 263
            SL    +                         NN L  +PA+    +SKL  LDL  N 
Sbjct: 408 VSLQALILSRNKIQEWPGVILKSLPNLSCLKLDNNPLRQIPADGFQAVSKLQILDLSGNS 467

Query: 264 -------------QLKEYCVEACQL-----------RLSVLDLSNNSL------------ 287
                        QL+E  +   QL           +L +LDLS NSL            
Sbjct: 468 ASLPDNPAFSSLPQLQELYLRRMQLCEVPSDILSLQQLQILDLSQNSLQLIPEGFKNLTS 527

Query: 288 -----------SGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
                      + LPPE+G +  +L+ L L GNPLR++R ++++  T A+LKYL+ ++PE
Sbjct: 528 LTELNLSDNSIATLPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLKYLKDKIPE 587

Query: 336 N 336
           +
Sbjct: 588 H 588


>gi|297830120|ref|XP_002882942.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328782|gb|EFH59201.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 584

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 299/407 (73%), Positives = 354/407 (86%), Gaps = 1/407 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAARTSGSLNLSNRSL+DVP EVY+  +  GEG+ WWEAVDLQKLILAHN+I  L
Sbjct: 1   MDRILKAARTSGSLNLSNRSLKDVPIEVYQCLETTGEGENWWEAVDLQKLILAHNDIAVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL  L VLNVSHN LS+LPAAIGEL  +KSLDVSFNSI ++P++IGSA +LVK D
Sbjct: 61  REDLKNLACLVVLNVSHNNLSQLPAAIGELTAMKSLDVSFNSITELPEQIGSAISLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSN+ KELP S+GRCL+LSD KASNN I+SLPED+ +CSK+SKLDVEGN+LT LS N I
Sbjct: 121 CSSNRFKELPESIGRCLDLSDLKASNNQISSLPEDMVNCSKLSKLDVEGNRLTALSENHI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTMLTEL ASKN+L+G+P+ IGSLSRLIRLDLHQN+ILS+P SI  C SL EFY+G N
Sbjct: 181 ASWTMLTELNASKNMLSGLPQNIGSLSRLIRLDLHQNKILSVPPSIGDCSSLVEFYLGIN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           +LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LDLSNNSL+GL PE+G MTTL
Sbjct: 241 SLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPELGNMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ AST TKE++I  A R+S++S
Sbjct: 301 RKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           KELSLEG+NLSA+PSE+WE+GEITK++LS+NSI+ELP +LS+  SLQ
Sbjct: 361 KELSLEGLNLSAVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQ 407



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 46/258 (17%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-N 138
           LS +P+ + E   +  +++S NSI ++P ++ ++ +L     S N++K+ P ++ + L N
Sbjct: 370 LSAVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPN 429

Query: 139 LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           L   K  NN +T +P D     S +  LD+ GN ++   +        L EL  S+  L+
Sbjct: 430 LVCLKLDNNPLTQIPLDGFQAVSGLRILDLSGNAVSFREHPKFCHLPQLQELYLSRIQLS 489

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +PE I +LS LI LDL+QN + SIP SI    SL    + NN +S+LP ELG L     
Sbjct: 490 EVPEDILNLSNLIILDLNQNSLQSIPKSIKNMTSLKHLDISNNNISSLPPELGLLEP--- 546

Query: 258 LDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                                                    TL  L L GNPLR++R  +
Sbjct: 547 -----------------------------------------TLEVLRLDGNPLRSIRRPI 565

Query: 318 VNGPTPALLKYLRSRLPE 335
           +   T A+L YL+ RLP+
Sbjct: 566 LERGTKAVLNYLKDRLPD 583



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 178/394 (45%), Gaps = 55/394 (13%)

Query: 47  LQKLILAHNNIEKLKED-LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L KL +  N +  L E+ + +  +LT LN S N LS LP  IG L  L  LD+  N I+ 
Sbjct: 162 LSKLDVEGNRLTALSENHIASWTMLTELNASKNMLSGLPQNIGSLSRLIRLDLHQNKILS 221

Query: 106 IPDEIGSATALVKF-----------------------DCSSNQLKELPSSLGRC-LNLSD 141
           +P  IG  ++LV+F                       D  SNQLKE P  +G C L LS 
Sbjct: 222 VPPSIGDCSSLVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYP--VGACKLKLSY 279

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT------MLTELIASKNL 195
              SNN +T L  +L + + + KL + GN L  L ++L+   T      + + L  S+  
Sbjct: 280 LDLSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEET 339

Query: 196 LNGMP---ETIGSLSRL----IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
               P     I S +R+      L L    + ++PS +     + +  +  N++  LPA+
Sbjct: 340 SASTPTKENVIASAARMSISSKELSLEGLNLSAVPSEVWESGEITKVNLSKNSIEELPAQ 399

Query: 249 LGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPE-IGKMTTLRKLLL 305
           L     L TL L  N++K++   +      L  L L NN L+ +P +    ++ LR L L
Sbjct: 400 LSTSVSLQTLILSRNKIKDWPGAILKSLPNLVCLKLDNNPLTQIPLDGFQAVSGLRILDL 459

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
           +GN + + R        P L +   SR+      + S   ED++ ++  +      L L 
Sbjct: 460 SGNAV-SFREHPKFCHLPQLQELYLSRI------QLSEVPEDILNLSNLII-----LDLN 507

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
             +L +IP  I     +  LD+S N+I  LPPEL
Sbjct: 508 QNSLQSIPKSIKNMTSLKHLDISNNNISSLPPEL 541



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 183/394 (46%), Gaps = 37/394 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA-AIGELHMLKSLDVSFNSI 103
           +DL  L  ++N I  L ED+ N   L+ L+V  N+L+ L    I    ML  L+ S N +
Sbjct: 137 LDLSDLKASNNQISSLPEDMVNCSKLSKLDVEGNRLTALSENHIASWTMLTELNASKNML 196

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             +P  IGS + L++ D   N++  +P S+G C +L +F    N +++LP ++ D S++ 
Sbjct: 197 SGLPQNIGSLSRLIRLDLHQNKILSVPPSIGDCSSLVEFYLGINSLSTLPAEIGDLSRLG 256

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            LD+  N+L      + A    L+ L  S N L G+   +G+++ L +L L  N + ++ 
Sbjct: 257 TLDLRSNQLKEYP--VGACKLKLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLR 314

Query: 224 SSISGCCSLAEFYMGNNALS-------ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 275
           SS+    + A      + LS       + P +   ++    + + S   KE  +E   L 
Sbjct: 315 SSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS---KELSLEGLNLS 371

Query: 276 ----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG-PTPA 324
                      ++ ++LS NS+  LP ++    +L+ L+L+ N ++    +++   P   
Sbjct: 372 AVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPNLV 431

Query: 325 LLKYLR---SRLPENEDSEASTTKE-DLITMATRLSVTSK--------ELSLEGMNLSAI 372
            LK      +++P +     S  +  DL   A       K        EL L  + LS +
Sbjct: 432 CLKLDNNPLTQIPLDGFQAVSGLRILDLSGNAVSFREHPKFCHLPQLQELYLSRIQLSEV 491

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           P +I     +  LDL++NS+Q +P  + +  SL+
Sbjct: 492 PEDILNLSNLIILDLNQNSLQSIPKSIKNMTSLK 525



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 12/120 (10%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKN------FDEAG------EGDKWWEAVDLQKLI 51
           ILK+      L L N  L  +P + ++        D +G      E  K+     LQ+L 
Sbjct: 423 ILKSLPNLVCLKLDNNPLTQIPLDGFQAVSGLRILDLSGNAVSFREHPKFCHLPQLQELY 482

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+   + ++ ED+ NL  L +L+++ N L  +P +I  +  LK LD+S N+I  +P E+G
Sbjct: 483 LSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKSIKNMTSLKHLDISNNNISSLPPELG 542


>gi|7021726|gb|AAF35407.1| unknown protein [Arabidopsis thaliana]
          Length = 562

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 298/407 (73%), Positives = 352/407 (86%), Gaps = 1/407 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAARTSGSLNLSNRSL+DVP EVY+  +  GEG+ WWEAVDLQKLILAHN+IE L
Sbjct: 1   MDRILKAARTSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL  L VLNVSHNKLS+LPAAIGEL  +KSLDVSFNSI ++P++IGSA +LVK D
Sbjct: 61  REDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAISLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSN+LKELP S+GRCL+LSD KA+NN I+SLPED+ +CSK+SKLDVEGNKLT LS N I
Sbjct: 121 CSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTML EL A KN+L  +P+ IGSLSRLIRLDLHQN+I S+P SI GC SL EFY+G N
Sbjct: 181 ASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGIN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           +LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LDLSNNSL+GL PE+G MTTL
Sbjct: 241 SLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPELGNMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ AST TKE++I  A R+S++S
Sbjct: 301 RKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           KELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS+  SLQ
Sbjct: 361 KELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQ 407



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 166/357 (46%), Gaps = 31/357 (8%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L +++ +L  L  L++  NK+S +P +IG    L    +  NS+  +P EIG  + L   
Sbjct: 199 LPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGINSLSTLPAEIGDLSRLGTL 258

Query: 120 DCSSNQLKELPSSLGRC-LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           D  SNQLKE P  +G C L LS    SNN +T L  +L + + + KL + GN L  L ++
Sbjct: 259 DLRSNQLKEYP--VGACKLKLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSS 316

Query: 179 LIASWT------MLTELIASKNLLNGMP---ETIGSLSRL----IRLDLHQNRILSIPSS 225
           L+   T      + + L  S+      P     I S +R+      L L    +  +PS 
Sbjct: 317 LVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISSKELSLEGLNLSDVPSE 376

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLS 283
           +     + +  +  N++  LPA+L     L TL L  N++K++   +      L  L L 
Sbjct: 377 VWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPNLMCLKLD 436

Query: 284 NNSLSGLPPEIGKMTT-LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           NN L+ +P +  ++ + L+ L L+ N + + R        P L +   SR+      + S
Sbjct: 437 NNPLNQIPLDGFQVVSGLQILDLSVNAV-SFREHPKFCHLPQLRELYLSRI------QLS 489

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
              ED++ ++  +      L L   +L +IP  I     +  LD+S N+I  LPPEL
Sbjct: 490 EVPEDILNLSNLII-----LDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPEL 541



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 3/192 (1%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-N 138
           LS++P+ + E   +  +++S NSI ++P ++ ++ +L     S N++K+ P ++ + L N
Sbjct: 370 LSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPN 429

Query: 139 LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           L   K  NN +  +P D     S +  LD+  N ++   +        L EL  S+  L+
Sbjct: 430 LMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLS 489

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS-KLG 256
            +PE I +LS LI LDL+QN + SIP  I    SL    + NN +S+LP ELG L   L 
Sbjct: 490 EVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELGLLEPTLE 549

Query: 257 TLDLHSNQLKEY 268
            L L  N L+ Y
Sbjct: 550 VLRLDGNPLRRY 561



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 143/333 (42%), Gaps = 67/333 (20%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +  L  N++  L  ++ +L  L  L++  N+L E P    +L  L  LD+S NS+  +
Sbjct: 232 LVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLK-LSYLDLSNNSLTGL 290

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSL-------------GRCLNLSDFKASN----NCI 149
             E+G+ T L K     N L+ L SSL              R  N  +  AS     N I
Sbjct: 291 HPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVI 350

Query: 150 TS--------------------LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
            S                    +P ++ +  +++K+++  N +  L   L  S ++ T L
Sbjct: 351 ASAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQT-L 409

Query: 190 IASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIP----SSISGC--------------- 229
           I S+N +   P  I  SL  L+ L L  N +  IP      +SG                
Sbjct: 410 ILSRNKIKDWPGAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREH 469

Query: 230 ---CSLA---EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
              C L    E Y+    LS +P ++  LS L  LDL+ N L+        +  L  LD+
Sbjct: 470 PKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDI 529

Query: 283 SNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLR 314
           SNN++S LPPE+G +  TL  L L GNPLR  +
Sbjct: 530 SNNNISSLPPELGLLEPTLEVLRLDGNPLRRYK 562



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E  K+     L++L L+   + ++ ED+ NL  L +L+++ N L  +P  I  +  LK L
Sbjct: 468 EHPKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHL 527

Query: 97  DVSFNSIMKIPDEIG 111
           D+S N+I  +P E+G
Sbjct: 528 DISNNNISSLPPELG 542


>gi|15795106|dbj|BAB02370.1| leucine-rich repeat protein; contains similarity to
           elicitor-inducible receptor EIR [Arabidopsis thaliana]
          Length = 594

 Score =  590 bits (1522), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 298/407 (73%), Positives = 352/407 (86%), Gaps = 1/407 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAARTSGSLNLSNRSL+DVP EVY+  +  GEG+ WWEAVDLQKLILAHN+IE L
Sbjct: 1   MDRILKAARTSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL  L VLNVSHNKLS+LPAAIGEL  +KSLDVSFNSI ++P++IGSA +LVK D
Sbjct: 61  REDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAISLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSN+LKELP S+GRCL+LSD KA+NN I+SLPED+ +CSK+SKLDVEGNKLT LS N I
Sbjct: 121 CSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTML EL A KN+L  +P+ IGSLSRLIRLDLHQN+I S+P SI GC SL EFY+G N
Sbjct: 181 ASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGIN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           +LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LDLSNNSL+GL PE+G MTTL
Sbjct: 241 SLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPELGNMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ AST TKE++I  A R+S++S
Sbjct: 301 RKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           KELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS+  SLQ
Sbjct: 361 KELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQ 407



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 169/386 (43%), Gaps = 79/386 (20%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L +++ +L  L  L++  NK+S +P +IG    L    +  NS+  +P EIG  + L   
Sbjct: 199 LPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGINSLSTLPAEIGDLSRLGTL 258

Query: 120 DCSSNQLKELPSSLGRC-LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN- 177
           D  SNQLKE P  +G C L LS    SNN +T L  +L + + + KL + GN L  L + 
Sbjct: 259 DLRSNQLKEYP--VGACKLKLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSS 316

Query: 178 -------------------------------NLIASWTMLTELIASKNL------LNGMP 200
                                          N+IAS   ++  I+SK L      L+ +P
Sbjct: 317 LVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMS--ISSKELSLEGLNLSDVP 374

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLD 259
             +     + +++L +N I  +P+ +S   SL    +  N +   P A L  L  L  L 
Sbjct: 375 SEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPNLMCLK 434

Query: 260 LHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLP-PEIGKMTTLRKLLLTGNPLRTLRSS 316
           L +N L +  ++  Q+   L +LDLS N++S    P+   +  LR+L             
Sbjct: 435 LDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLREL------------- 481

Query: 317 LVNGPTPALLKYLRSRLPENE-DS--EASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                      YLR R+P    DS  + S   ED++ ++  +      L L   +L +IP
Sbjct: 482 -----------YLRYRIPYTSLDSRIQLSEVPEDILNLSNLII-----LDLNQNSLQSIP 525

Query: 374 SEIWEAGEITKLDLSRNSIQELPPEL 399
             I     +  LD+S N+I  LPPEL
Sbjct: 526 KGIKNMTSLKHLDISNNNISSLPPEL 551



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 121/268 (45%), Gaps = 56/268 (20%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-N 138
           LS++P+ + E   +  +++S NSI ++P ++ ++ +L     S N++K+ P ++ + L N
Sbjct: 370 LSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPN 429

Query: 139 LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL-------- 189
           L   K  NN +  +P D     S +  LD+  N ++   +        L EL        
Sbjct: 430 LMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLRYRIPY 489

Query: 190 --IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
             + S+  L+ +PE I +LS LI LDL+QN + SIP  I    SL    + NN +S+LP 
Sbjct: 490 TSLDSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPP 549

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           ELG L                                              TL  L L G
Sbjct: 550 ELGLLEP--------------------------------------------TLEVLRLDG 565

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           NPLR++R  ++   T A+L YL+ RLP+
Sbjct: 566 NPLRSIRRPILERGTKAVLNYLKDRLPD 593



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 34/55 (61%)

Query: 57  IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           + ++ ED+ NL  L +L+++ N L  +P  I  +  LK LD+S N+I  +P E+G
Sbjct: 498 LSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELG 552


>gi|30683597|ref|NP_188160.2| leucine-rich repeat-containing protein [Arabidopsis thaliana]
 gi|21703129|gb|AAM74505.1| AT3g15410/MJK13_7 [Arabidopsis thaliana]
 gi|24111377|gb|AAN46812.1| At3g15410/MJK13_7 [Arabidopsis thaliana]
 gi|332642149|gb|AEE75670.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
          Length = 584

 Score =  590 bits (1521), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 298/407 (73%), Positives = 352/407 (86%), Gaps = 1/407 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAARTSGSLNLSNRSL+DVP EVY+  +  GEG+ WWEAVDLQKLILAHN+IE L
Sbjct: 1   MDRILKAARTSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL  L VLNVSHNKLS+LPAAIGEL  +KSLDVSFNSI ++P++IGSA +LVK D
Sbjct: 61  REDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAISLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSN+LKELP S+GRCL+LSD KA+NN I+SLPED+ +CSK+SKLDVEGNKLT LS N I
Sbjct: 121 CSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTML EL A KN+L  +P+ IGSLSRLIRLDLHQN+I S+P SI GC SL EFY+G N
Sbjct: 181 ASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGIN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           +LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LDLSNNSL+GL PE+G MTTL
Sbjct: 241 SLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPELGNMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ AST TKE++I  A R+S++S
Sbjct: 301 RKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           KELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS+  SLQ
Sbjct: 361 KELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQ 407



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 46/258 (17%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-N 138
           LS++P+ + E   +  +++S NSI ++P ++ ++ +L     S N++K+ P ++ + L N
Sbjct: 370 LSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPN 429

Query: 139 LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           L   K  NN +  +P D     S +  LD+  N ++   +        L EL  S+  L+
Sbjct: 430 LMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLS 489

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +PE I +LS LI LDL+QN + SIP  I    SL    + NN +S+LP ELG L     
Sbjct: 490 EVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELGLLEP--- 546

Query: 258 LDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                                                    TL  L L GNPLR++R  +
Sbjct: 547 -----------------------------------------TLEVLRLDGNPLRSIRRPI 565

Query: 318 VNGPTPALLKYLRSRLPE 335
           +   T A+L YL+ RLP+
Sbjct: 566 LERGTKAVLNYLKDRLPD 583



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 166/357 (46%), Gaps = 31/357 (8%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L +++ +L  L  L++  NK+S +P +IG    L    +  NS+  +P EIG  + L   
Sbjct: 199 LPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGINSLSTLPAEIGDLSRLGTL 258

Query: 120 DCSSNQLKELPSSLGRC-LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           D  SNQLKE P  +G C L LS    SNN +T L  +L + + + KL + GN L  L ++
Sbjct: 259 DLRSNQLKEYP--VGACKLKLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSS 316

Query: 179 LIASWT------MLTELIASKNLLNGMP---ETIGSLSRL----IRLDLHQNRILSIPSS 225
           L+   T      + + L  S+      P     I S +R+      L L    +  +PS 
Sbjct: 317 LVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISSKELSLEGLNLSDVPSE 376

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLS 283
           +     + +  +  N++  LPA+L     L TL L  N++K++   +      L  L L 
Sbjct: 377 VWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPNLMCLKLD 436

Query: 284 NNSLSGLPPEIGKMTT-LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           NN L+ +P +  ++ + L+ L L+ N + + R        P L +   SR+      + S
Sbjct: 437 NNPLNQIPLDGFQVVSGLQILDLSVNAV-SFREHPKFCHLPQLRELYLSRI------QLS 489

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
              ED++ ++  +      L L   +L +IP  I     +  LD+S N+I  LPPEL
Sbjct: 490 EVPEDILNLSNLII-----LDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPEL 541



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E  K+     L++L L+   + ++ ED+ NL  L +L+++ N L  +P  I  +  LK L
Sbjct: 468 EHPKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHL 527

Query: 97  DVSFNSIMKIPDEIG 111
           D+S N+I  +P E+G
Sbjct: 528 DISNNNISSLPPELG 542


>gi|2760084|emb|CAA76000.1| leucine-rich repeat protein [Arabidopsis thaliana]
          Length = 584

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 298/407 (73%), Positives = 352/407 (86%), Gaps = 1/407 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAARTSGSLNLSNRSL+DVP EVY+  + AGEG+ WWEAVDLQKLILAHN+IE L
Sbjct: 1   MDRILKAARTSGSLNLSNRSLKDVPTEVYQCLETAGEGENWWEAVDLQKLILAHNDIEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL  L VLNVSHNKLS+LPAAIGEL  +KSLDVSFNSI ++P++IGSA +LVK D
Sbjct: 61  REDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAISLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSN+LKELP S+GRCL+LSD KA+NN I+SLPED+ +CSK+SKLDVE NKLT LS N I
Sbjct: 121 CSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEXNKLTALSENHI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTML EL A KN+L  +P+ IGSLSRLIRLDLHQN+I S+P SI GC SL EFY+G N
Sbjct: 181 ASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGIN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           +LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LDLSNNSL+GL PE+G MTTL
Sbjct: 241 SLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPELGNMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ AST TKE++I  A R+S++S
Sbjct: 301 RKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           KELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS+  SLQ
Sbjct: 361 KELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQ 407



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 119/258 (46%), Gaps = 46/258 (17%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-N 138
           LS++P+ + E   +  +++S NSI ++P ++ ++ +L     S N++K+ P ++ + L N
Sbjct: 370 LSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPN 429

Query: 139 LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
               K  NN +  +P D     S +  LD+  N ++   +        L EL  S+  L+
Sbjct: 430 PMCLKLDNNPLNQIPLDGFQVISGLQILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLS 489

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +PE I +LS LI LDL+QN + SIP  I    SL    + NN +S+LP ELG L     
Sbjct: 490 EVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELGXLEP--- 546

Query: 258 LDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                                                    TL  L L GNPLR++R  +
Sbjct: 547 -----------------------------------------TLEVLRLDGNPLRSIRRPI 565

Query: 318 VNGPTPALLKYLRSRLPE 335
           +   T A+L YL+ RLP+
Sbjct: 566 LERGTKAVLNYLKDRLPD 583



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 164/357 (45%), Gaps = 31/357 (8%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L +++ +L  L  L++  NK+S +P +IG    L    +  NS+  +P EIG  + L   
Sbjct: 199 LPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGINSLSTLPAEIGDLSRLGTL 258

Query: 120 DCSSNQLKELPSSLGRC-LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           D  SNQLKE P  +G C L LS    SNN +T L  +L + + + KL + GN L  L ++
Sbjct: 259 DLRSNQLKEYP--VGACKLKLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSS 316

Query: 179 LIASWT------MLTELIASKNLLNGMP---ETIGSLSRL----IRLDLHQNRILSIPSS 225
           L+   T      + + L  S+      P     I S +R+      L L    +  +PS 
Sbjct: 317 LVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISSKELSLEGLNLSDVPSE 376

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLS 283
           +     + +  +  N++  LPA+L     L TL L  N++K++   +         L L 
Sbjct: 377 VWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPNPMCLKLD 436

Query: 284 NNSLSGLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           NN L+ +P +    ++ L+ L L+ N + + R        P L +   SR+      + S
Sbjct: 437 NNPLNQIPLDGFQVISGLQILDLSVNAV-SFREHPKFCHLPQLRELYLSRI------QLS 489

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
              ED++ ++  +      L L   +L +IP  I     +  LD+S N+I  LPPEL
Sbjct: 490 EVPEDILNLSNLII-----LDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPEL 541



 Score = 46.2 bits (108), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 12/120 (10%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK------------NFDEAGEGDKWWEAVDLQKLI 51
           ILK+      L L N  L  +P + ++            N     E  K+     L++L 
Sbjct: 423 ILKSLPNPMCLKLDNNPLNQIPLDGFQVISGLQILDLSVNAVSFREHPKFCHLPQLRELY 482

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+   + ++ ED+ NL  L +L+++ N L  +P  I  +  LK LD+S N+I  +P E+G
Sbjct: 483 LSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELG 542


>gi|1946300|emb|CAA73132.1| hypothetical protein [Silene latifolia]
          Length = 581

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 296/408 (72%), Positives = 352/408 (86%), Gaps = 1/408 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDR+LKAARTSGSLNLSNRSLRDVP EVYKNFD A EG+ WWE VDLQKLILAHNNIE L
Sbjct: 1   MDRLLKAARTSGSLNLSNRSLRDVPIEVYKNFDGAPEGENWWETVDLQKLILAHNNIEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           KEDL+NLPLLTVLNVSHNKL++LPAAIGEL  LKSLDVSFN +  IP EIGSAT+LVK D
Sbjct: 61  KEDLKNLPLLTVLNVSHNKLTQLPAAIGELPSLKSLDVSFNLLTNIPAEIGSATSLVKMD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CS+NQLKELPSSLG+CL+L++ KASNN I SLP+DLA C+K+ K+D+EGNKLT L + ++
Sbjct: 121 CSNNQLKELPSSLGQCLDLAELKASNNLIGSLPDDLAYCTKLLKVDIEGNKLTTLLDPVV 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            SW+ML+EL ASKNLL G+PETIG+L RLIRLDLHQNRI SIPSSI GC SL EF++G+N
Sbjct: 181 GSWSMLSELNASKNLLTGLPETIGTLVRLIRLDLHQNRIKSIPSSIKGCSSLVEFFIGSN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS+LP+ELG+LS+L  LDL SNQL EY  EAC+LRLSVLDLSNNSLSGLP EIG MT+L
Sbjct: 241 LLSSLPSELGELSQLSVLDLRSNQLTEYPAEACKLRLSVLDLSNNSLSGLPAEIGLMTSL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKL+L GNP+RT+RS+LV GPT ALLKYLR RLP  E+++  T +K++++ MA+RLS+T+
Sbjct: 301 RKLVLIGNPMRTIRSTLVTGPTAALLKYLRGRLPSAEEAQVMTPSKDNMVAMASRLSITT 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           KELSL GM L A+P E+ E+ EITK+DLS+NSIQELP  LS+C+SL+V
Sbjct: 361 KELSLVGMGLIAVPPEVCESNEITKVDLSKNSIQELPVTLSACSSLEV 408



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 190/399 (47%), Gaps = 32/399 (8%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSEL-PAAIGELHMLKSLDVSFN 101
           + +DL +L  ++N I  L +DL     L  +++  NKL+ L    +G   ML  L+ S N
Sbjct: 135 QCLDLAELKASNNLIGSLPDDLAYCTKLLKVDIEGNKLTTLLDPVVGSWSMLSELNASKN 194

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P+ IG+   L++ D   N++K +PSS+  C +L +F   +N ++SLP +L + S+
Sbjct: 195 LLTGLPETIGTLVRLIRLDLHQNRIKSIPSSIKGCSSLVEFFIGSNLLSSLPSELGELSQ 254

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +S LD+  N+LT       A    L+ L  S N L+G+P  IG ++ L +L L  N + +
Sbjct: 255 LSVLDLRSNQLTEYPAE--ACKLRLSVLDLSNNSLSGLPAEIGLMTSLRKLVLIGNPMRT 312

Query: 222 IPSS-ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN---QLKEYCV------- 270
           I S+ ++G  +    Y+     SA  A++   SK   + + S      KE  +       
Sbjct: 313 IRSTLVTGPTAALLKYLRGRLPSAEEAQVMTPSKDNMVAMASRLSITTKELSLVGMGLIA 372

Query: 271 ---EACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN-----PLRTLRS------ 315
              E C+   ++ +DLS NS+  LP  +   ++L  L+L+ N     P   L+S      
Sbjct: 373 VPPEVCESNEITKVDLSKNSIQELPVTLSACSSLEVLILSRNKIKDWPEDALKSLPNLTC 432

Query: 316 -SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS-KELSLEGMNLSAIP 373
             L N P   +       +P  +  + S     L+      S+    EL L  + L  +P
Sbjct: 433 LRLDNNPLNKVPLNGFDAVPRLQILDLSGCVSSLVDNPAFASLQHLVELYLRRVKLQEVP 492

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASL-QVKFSD 411
           S+I    ++  LDLS+NS+  +P    +  SL ++  SD
Sbjct: 493 SDILMLRKLQILDLSQNSLHSIPQGFQNLTSLTELDLSD 531



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 166/352 (47%), Gaps = 67/352 (19%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +  +  N +  L  +L  L  L+VL++  N+L+E PA   +L  L  LD+S NS+  +
Sbjct: 232 LVEFFIGSNLLSSLPSELGELSQLSVLDLRSNQLTEYPAEACKLR-LSVLDLSNNSLSGL 290

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSL-------------GRCLNLSDFK---------- 143
           P EIG  T+L K     N ++ + S+L             GR  +  + +          
Sbjct: 291 PAEIGLMTSLRKLVLIGNPMRTIRSTLVTGPTAALLKYLRGRLPSAEEAQVMTPSKDNMV 350

Query: 144 --ASNNCITS------------LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
             AS   IT+            +P ++ + ++++K+D+  N +  L   L ++ + L  L
Sbjct: 351 AMASRLSITTKELSLVGMGLIAVPPEVCESNEITKVDLSKNSIQELPVTL-SACSSLEVL 409

Query: 190 IASKNLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSS------------ISGCCS----- 231
           I S+N +   PE  + SL  L  L L  N +  +P +            +SGC S     
Sbjct: 410 ILSRNKIKDWPEDALKSLPNLTCLRLDNNPLNKVPLNGFDAVPRLQILDLSGCVSSLVDN 469

Query: 232 --------LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
                   L E Y+    L  +P+++  L KL  LDL  N L         L  L+ LDL
Sbjct: 470 PAFASLQHLVELYLRRVKLQEVPSDILMLRKLQILDLSQNSLHSIPQGFQNLTSLTELDL 529

Query: 283 SNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           S+NS+  LPPE+G +  +L+ L L GNPLR++R ++++  T A+L+YL+ ++
Sbjct: 530 SDNSIGTLPPELGLLEPSLQALRLDGNPLRSIRRTILDRGTKAVLQYLKDKI 581


>gi|334185371|ref|NP_001189901.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
 gi|332642150|gb|AEE75671.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 298/413 (72%), Positives = 351/413 (84%), Gaps = 7/413 (1%)

Query: 1   MDRILKAARTSGSLNLSNRSLR------DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAH 54
           MDRILKAARTSGSLNLSNRSL       DVP EVY+  +  GEG+ WWEAVDLQKLILAH
Sbjct: 1   MDRILKAARTSGSLNLSNRSLNFDPITWDVPTEVYQCLETTGEGENWWEAVDLQKLILAH 60

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N+IE L+EDL+NL  L VLNVSHNKLS+LPAAIGEL  +KSLDVSFNSI ++P++IGSA 
Sbjct: 61  NDIEVLREDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAI 120

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +LVK DCSSN+LKELP S+GRCL+LSD KA+NN I+SLPED+ +CSK+SKLDVEGNKLT 
Sbjct: 121 SLVKLDCSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTA 180

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           LS N IASWTML EL A KN+L  +P+ IGSLSRLIRLDLHQN+I S+P SI GC SL E
Sbjct: 181 LSENHIASWTMLAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVE 240

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI 294
           FY+G N+LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LDLSNNSL+GL PE+
Sbjct: 241 FYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPEL 300

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMAT 353
           G MTTLRKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ AST TKE++I  A 
Sbjct: 301 GNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAA 360

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           R+S++SKELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS+  SLQ
Sbjct: 361 RMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQ 413



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 46/258 (17%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-N 138
           LS++P+ + E   +  +++S NSI ++P ++ ++ +L     S N++K+ P ++ + L N
Sbjct: 376 LSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPN 435

Query: 139 LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           L   K  NN +  +P D     S +  LD+  N ++   +        L EL  S+  L+
Sbjct: 436 LMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLS 495

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +PE I +LS LI LDL+QN + SIP  I    SL    + NN +S+LP ELG L     
Sbjct: 496 EVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELGLLEP--- 552

Query: 258 LDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                                                    TL  L L GNPLR++R  +
Sbjct: 553 -----------------------------------------TLEVLRLDGNPLRSIRRPI 571

Query: 318 VNGPTPALLKYLRSRLPE 335
           +   T A+L YL+ RLP+
Sbjct: 572 LERGTKAVLNYLKDRLPD 589



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 171/370 (46%), Gaps = 31/370 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L    N +  L +++ +L  L  L++  NK+S +P +IG    L    +  NS+  +
Sbjct: 192 LAELNACKNMLGVLPQNIGSLSRLIRLDLHQNKISSVPPSIGGCSSLVEFYLGINSLSTL 251

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRC-LNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P EIG  + L   D  SNQLKE P  +G C L LS    SNN +T L  +L + + + KL
Sbjct: 252 PAEIGDLSRLGTLDLRSNQLKEYP--VGACKLKLSYLDLSNNSLTGLHPELGNMTTLRKL 309

Query: 166 DVEGNKLTVLSNNLIASWT------MLTELIASKNLLNGMP---ETIGSLSRL----IRL 212
            + GN L  L ++L+   T      + + L  S+      P     I S +R+      L
Sbjct: 310 VLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISSKEL 369

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CV 270
            L    +  +PS +     + +  +  N++  LPA+L     L TL L  N++K++   +
Sbjct: 370 SLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAI 429

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTT-LRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                 L  L L NN L+ +P +  ++ + L+ L L+ N + + R        P L +  
Sbjct: 430 LKSLPNLMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAV-SFREHPKFCHLPQLRELY 488

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
            SR+      + S   ED++ ++  +      L L   +L +IP  I     +  LD+S 
Sbjct: 489 LSRI------QLSEVPEDILNLSNLII-----LDLNQNSLQSIPKGIKNMTSLKHLDISN 537

Query: 390 NSIQELPPEL 399
           N+I  LPPEL
Sbjct: 538 NNISSLPPEL 547



 Score = 45.4 bits (106), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E  K+     L++L L+   + ++ ED+ NL  L +L+++ N L  +P  I  +  LK L
Sbjct: 474 EHPKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHL 533

Query: 97  DVSFNSIMKIPDEIG 111
           D+S N+I  +P E+G
Sbjct: 534 DISNNNISSLPPELG 548


>gi|2760086|emb|CAA76001.1| leucine-rich repeat protein [Arabidopsis thaliana]
          Length = 584

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 294/407 (72%), Positives = 349/407 (85%), Gaps = 1/407 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MDRILKAARTSGSLNLSNRSL+DVP EVY+  +  GEG+ WWEAVDLQKLILAHN+IE L
Sbjct: 1   MDRILKAARTSGSLNLSNRSLKDVPTEVYQCLETTGEGENWWEAVDLQKLILAHNDIEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDL+NL  L VLNVSHNKLS+LPAAIGEL  +KSLDVSFNSI ++P++IGSA +LVK D
Sbjct: 61  REDLKNLACLVVLNVSHNKLSQLPAAIGELTAMKSLDVSFNSISELPEQIGSAISLVKLD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CSSN+LKELP S+GRCL+LSD KA+NN I+SLPED+ +CSK+SKLDVEGNKLT LS N I
Sbjct: 121 CSSNRLKELPDSIGRCLDLSDLKATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSENHI 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ASWTML E  A K++L  +P+ IGSLSRLIR D HQN+I S+P SI GC SL EFY+G N
Sbjct: 181 ASWTMLAEPNACKDMLGVLPQNIGSLSRLIRPDPHQNKISSVPPSIGGCSSLVEFYLGIN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
           +LS LPAE+G LS+LGTLDL SNQLKEY V AC+L+LS LDLSNNSL+GL PE+G MTTL
Sbjct: 241 SLSTLPAEIGDLSRLGTLDLRSNQLKEYPVGACKLKLSYLDLSNNSLTGLHPELGNMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKL+L GNPLRTLRSSLVNGPT ALLKYLRSRL  +E++ AST TKE++I  A R+S++S
Sbjct: 301 RKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRLSNSEETSASTPTKENVIASAARMSISS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           KELSLEG+NLS +PSE+WE+GEITK++LS+NSI+ELP +LS+  SLQ
Sbjct: 361 KELSLEGLNLSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQ 407



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 120/258 (46%), Gaps = 46/258 (17%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-N 138
           LS++P+ + E   +  +++S NSI ++P ++ ++ +L     S N++K+ P ++ + L N
Sbjct: 370 LSDVPSEVWESGEITKVNLSKNSIEELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPN 429

Query: 139 LSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           L   K  NN +  +P D     S +  LD+  N ++   +        L EL  S+  L+
Sbjct: 430 LMCLKLDNNPLNQIPLDGFQVVSGLQILDLSVNAVSFREHPKFCHLPQLRELYLSRIQLS 489

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +PE I +LS LI LDL+QN + SIP  I    SL    + NN +S+LP ELG L     
Sbjct: 490 EVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPELGLLEP--- 546

Query: 258 LDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                                                    TL  L L GNPLR++R  +
Sbjct: 547 -----------------------------------------TLEVLRLDGNPLRSIRRPI 565

Query: 318 VNGPTPALLKYLRSRLPE 335
           +   T A+L YL+ RLP+
Sbjct: 566 LERGTKAVLNYLKDRLPD 583



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 156/340 (45%), Gaps = 31/340 (9%)

Query: 77  HNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC 136
            NK+S +P +IG    L    +  NS+  +P EIG  + L   D  SNQLKE P  +G C
Sbjct: 216 QNKISSVPPSIGGCSSLVEFYLGINSLSTLPAEIGDLSRLGTLDLRSNQLKEYP--VGAC 273

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT------MLTEL 189
            L LS    SNN +T L  +L + + + KL + GN L  L ++L+   T      + + L
Sbjct: 274 KLKLSYLDLSNNSLTGLHPELGNMTTLRKLVLVGNPLRTLRSSLVNGPTAALLKYLRSRL 333

Query: 190 IASKNLLNGMP---ETIGSLSRL----IRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
             S+      P     I S +R+      L L    +  +PS +     + +  +  N++
Sbjct: 334 SNSEETSASTPTKENVIASAARMSISSKELSLEGLNLSDVPSEVWESGEITKVNLSKNSI 393

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT- 299
             LPA+L     L TL L  N++K++   +      L  L L NN L+ +P +  ++ + 
Sbjct: 394 EELPAQLSTSVSLQTLILSRNKIKDWPGAILKSLPNLMCLKLDNNPLNQIPLDGFQVVSG 453

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L+ L L+ N + + R        P L +   SR+      + S   ED++ ++  +    
Sbjct: 454 LQILDLSVNAV-SFREHPKFCHLPQLRELYLSRI------QLSEVPEDILNLSNLII--- 503

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
             L L   +L +IP  I     +  LD+S N+I  LPPEL
Sbjct: 504 --LDLNQNSLQSIPKGIKNMTSLKHLDISNNNISSLPPEL 541



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 43/75 (57%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E  K+     L++L L+   + ++ ED+ NL  L +L+++ N L  +P  I  +  LK L
Sbjct: 468 EHPKFCHLPQLRELYLSRIQLSEVPEDILNLSNLIILDLNQNSLQSIPKGIKNMTSLKHL 527

Query: 97  DVSFNSIMKIPDEIG 111
           D+S N+I  +P E+G
Sbjct: 528 DISNNNISSLPPELG 542


>gi|357137806|ref|XP_003570490.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Brachypodium distachyon]
          Length = 586

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 271/410 (66%), Positives = 336/410 (81%), Gaps = 3/410 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+RILK+AR SGSLNLSNRSLR+VP EVY N D   + DKWWE VDLQKLILAHNN+E L
Sbjct: 1   MERILKSARESGSLNLSNRSLREVPGEVYNNLDTGSQDDKWWEGVDLQKLILAHNNLEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDLRNL  L VLN+SHN++  LPAAIG+L +LKSLD+SFN I  +P+EIG A ALVK D
Sbjct: 61  REDLRNLSSLVVLNISHNQIYSLPAAIGDLPLLKSLDISFNQINTVPEEIGLAAALVKVD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+N L ELP+SL  CLNLS+ KASNN I+ +P++LA CSK+SKLD+EGNKL +LS N+ 
Sbjct: 121 FSNNCLTELPASLAGCLNLSELKASNNKISRIPDELAGCSKLSKLDLEGNKLEMLSENMF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           +SWT+LTEL A+KN+L  +P +IG+LS+LIRLDLHQN+I  IPSSI GC SLAEFYMGNN
Sbjct: 181 SSWTILTELNAAKNILTTIPASIGALSKLIRLDLHQNKITLIPSSIKGCSSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            L ++PA++G LSKLGTLDLHSNQLKEY V AC+L+LS LDLSNN+LSGLPPE+G MTTL
Sbjct: 241 LLLSIPADIGMLSKLGTLDLHSNQLKEYPVGACKLKLSFLDLSNNTLSGLPPELGTMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS---TTKEDLITMATRLSV 357
           RKLLL+GNP+RTLRSSLV+GPT  LLKYLRSRL  +E++  S    TK+D +  A RLS+
Sbjct: 301 RKLLLSGNPMRTLRSSLVSGPTSTLLKYLRSRLSSDEEASGSGRTPTKDDQVAAARRLSL 360

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +SKEL+L G+ ++++P   WE  ++ KLDLS+NSI++LP EL+ C+SLQ 
Sbjct: 361 SSKELNLSGLGVTSVPPAAWETSDVVKLDLSKNSIEDLPNELTLCSSLQA 410



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 192/466 (41%), Gaps = 147/466 (31%)

Query: 8   ARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL-RN 66
           A  +G LNLS   L+   N++ +  DE     K      L KL L  N +E L E++  +
Sbjct: 131 ASLAGCLNLS--ELKASNNKISRIPDELAGCSK------LSKLDLEGNKLEMLSENMFSS 182

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF------- 119
             +LT LN + N L+ +PA+IG L  L  LD+  N I  IP  I   ++L +F       
Sbjct: 183 WTILTELNAAKNILTTIPASIGALSKLIRLDLHQNKITLIPSSIKGCSSLAEFYMGNNLL 242

Query: 120 ----------------DCSSNQLKELPSSLGRC-LNLSDFKASNNCITSLPEDLADCSKM 162
                           D  SNQLKE P  +G C L LS    SNN ++ LP +L   + +
Sbjct: 243 LSIPADIGMLSKLGTLDLHSNQLKEYP--VGACKLKLSFLDLSNNTLSGLPPELGTMTTL 300

Query: 163 SKLDVEGNKLTVLSNNLIA--SWTMLTEL------------------------------I 190
            KL + GN +  L ++L++  + T+L  L                              +
Sbjct: 301 RKLLLSGNPMRTLRSSLVSGPTSTLLKYLRSRLSSDEEASGSGRTPTKDDQVAAARRLSL 360

Query: 191 ASKNL------LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +SK L      +  +P      S +++LDL +N I  +P+ ++ C SL    + NN +  
Sbjct: 361 SSKELNLSGLGVTSVPPAAWETSDVVKLDLSKNSIEDLPNELTLCSSLQALVLSNNKIKK 420

Query: 245 LPA-------------------------ELGKLSKLGTLDLHSN--------------QL 265
            P                          +L  LSKL  LDL  N              QL
Sbjct: 421 WPGMVVSSLPSLSSLKLDNNPLAEISSTDLEVLSKLEVLDLSGNASSLTKPSALSSLPQL 480

Query: 266 KEYCVEACQLR----------------------------------LSVLDLSNNSLSGLP 291
           +E  +   +L                                   L  L+LS+N+++ LP
Sbjct: 481 QELYLRRVKLHEFPIGLLGLKLLRILDLSQNYLTTIPEGIKEFTALIELNLSDNNITALP 540

Query: 292 PEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
            E+G +   L+ L L GNPLR++R ++++  T A+L+YL+ +LP +
Sbjct: 541 AELGLLEPNLQVLKLDGNPLRSIRRTVLDRGTKAVLQYLKDKLPSH 586


>gi|242067058|ref|XP_002454818.1| hypothetical protein SORBIDRAFT_04g038010 [Sorghum bicolor]
 gi|241934649|gb|EES07794.1| hypothetical protein SORBIDRAFT_04g038010 [Sorghum bicolor]
          Length = 586

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/401 (66%), Positives = 324/401 (80%), Gaps = 3/401 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+RILK+AR SGSLNLSNRSLR++P EVY N D   + +KWWE VDLQKLILAHNN+E L
Sbjct: 1   MERILKSARESGSLNLSNRSLREIPKEVYNNLDTGSQDEKWWEGVDLQKLILAHNNLEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDLRNL  L VLN+SHN +S LPAAIG+L +LKSLD+SFN I  +P+EIG ATALVK D
Sbjct: 61  REDLRNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDISFNQINTLPEEIGLATALVKVD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+N L ELP SL +C +LS+ KASNN I+ +P+ LA CSK+SKLD+EGNKL +LS N+ 
Sbjct: 121 FSNNFLTELPPSLAKCPDLSELKASNNNISRIPDVLAGCSKLSKLDLEGNKLVMLSENMF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            SWTMLTEL  +KNLL  +P +IG+L +LIRLD+HQN+I SIP SI GC SLAEFYMGNN
Sbjct: 181 VSWTMLTELNLAKNLLTAIPSSIGALPKLIRLDMHQNKITSIPPSIKGCSSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS++PA++G LSKLG LDLHSNQLKEY V AC L+LS LDLSNNSLSGLP E+GKMTTL
Sbjct: 241 LLSSIPADIGMLSKLGILDLHSNQLKEYPVGACNLKLSFLDLSNNSLSGLPAELGKMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS---TTKEDLITMATRLSV 357
           RKLLLTGNP+RTLRSSLV+GPT  LLKYLRSRL  +E++  S    TK+D I  A RLS+
Sbjct: 301 RKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEASGSGSTPTKDDQIAAARRLSL 360

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           +SKEL L G+ ++++P+  WE  ++ KLDLS+NSI++LP E
Sbjct: 361 SSKELDLSGLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNE 401



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 153/355 (43%), Gaps = 69/355 (19%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +  + +N +  +  D+  L  L +L++  N+L E P     L  L  LD+S NS+  +
Sbjct: 232 LAEFYMGNNLLSSIPADIGMLSKLGILDLHSNQLKEYPVGACNLK-LSFLDLSNNSLSGL 290

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSL--------------------------------- 133
           P E+G  T L K   + N ++ L SSL                                 
Sbjct: 291 PAELGKMTTLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEASGSGSTPTKDD 350

Query: 134 ----GRCLNLS--DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL------------ 175
                R L+LS  +   S   +TS+P    + S + KLD+  N +  L            
Sbjct: 351 QIAAARRLSLSSKELDLSGLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQS 410

Query: 176 ---SNNLIASW--------TMLTELIASKNLLNGMPET-IGSLSRLIRLDLHQN-RILSI 222
              SNN I  W          L+ L    N L  +  T +  LS+L  LDL  N   L  
Sbjct: 411 LVLSNNKIKKWPRTVVSSLPSLSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGNASALPE 470

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVL 280
           PS++S    L E Y+    L   P  L  L +L  LDL  N L     E  +    L  L
Sbjct: 471 PSAVSALPQLHELYLRRMKLHEFPNGLLGLKQLRILDLSQNSLT-TVPEGIKNFTALIEL 529

Query: 281 DLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           DLS+N+++ LP E+G +   L+ L L GNPLR++R +L+   T A+LKYL+ +LP
Sbjct: 530 DLSDNNITALPAELGLLEANLQVLKLDGNPLRSIRRTLLERGTKAILKYLKEKLP 584



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 173/381 (45%), Gaps = 34/381 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L LA N +  +   +  LP L  L++  NK++ +P +I     L    +  N +  I
Sbjct: 186 LTELNLAKNLLTAIPSSIGALPKLIRLDMHQNKITSIPPSIKGCSSLAEFYMGNNLLSSI 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRC-LNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P +IG  + L   D  SNQLKE P  +G C L LS    SNN ++ LP +L   + + KL
Sbjct: 246 PADIGMLSKLGILDLHSNQLKEYP--VGACNLKLSFLDLSNNSLSGLPAELGKMTTLRKL 303

Query: 166 DVEGNKLTVLSNNLIASWT-----MLTELIASKNLLNGMPET------IGSLSRL----I 210
            + GN +  L ++L++  T      L   ++S    +G   T      I +  RL     
Sbjct: 304 LLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEASGSGSTPTKDDQIAAARRLSLSSK 363

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-- 268
            LDL    + S+P++      + +  +  N++  LP EL   S L +L L +N++K++  
Sbjct: 364 ELDLSGLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQSLVLSNNKIKKWPR 423

Query: 269 CVEACQLRLSVLDLSNNSLSGLP-PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
            V +    LS L L NN L  +   ++  ++ L  L L+GN       S V+   P L +
Sbjct: 424 TVVSSLPSLSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGNASALPEPSAVSA-LPQLHE 482

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
               R+  +E        + L           + L L   +L+ +P  I     + +LDL
Sbjct: 483 LYLRRMKLHEFPNGLLGLKQL-----------RILDLSQNSLTTVPEGIKNFTALIELDL 531

Query: 388 SRNSIQELPPELSSC-ASLQV 407
           S N+I  LP EL    A+LQV
Sbjct: 532 SDNNITALPAELGLLEANLQV 552


>gi|293333389|ref|NP_001169465.1| uncharacterized protein LOC100383336 [Zea mays]
 gi|224029533|gb|ACN33842.1| unknown [Zea mays]
          Length = 584

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 266/399 (66%), Positives = 322/399 (80%), Gaps = 1/399 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+RILK+AR SGSLNLSNRSLR++P EVY N D   + +KWWE VDLQKLILAHNN+E L
Sbjct: 1   MERILKSARESGSLNLSNRSLREIPKEVYNNLDTGSQDEKWWEGVDLQKLILAHNNLEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDLRNL  L VLN+SHNK+S LPAAIG+L +LKSLD+SFN I  +P+EIG ATALVK D
Sbjct: 61  REDLRNLSSLVVLNISHNKISSLPAAIGDLPLLKSLDMSFNQINTLPEEIGLATALVKVD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+N L ELP +L  C +LS+ KASNN I+ +P+ LA CSK+SKLD+EGNKL  LS N+ 
Sbjct: 121 FSNNCLTELPPNLATCPDLSELKASNNNISRVPDVLAGCSKLSKLDLEGNKLVALSENMF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            SWTMLTEL  +KNLL  +P +IG+L +LIRLD+HQN+I SIP SI GC SLAE YMGNN
Sbjct: 181 VSWTMLTELNLAKNLLTAIPGSIGALPKLIRLDMHQNKITSIPPSIKGCSSLAELYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS++PA++G LSKLG LDLHSNQLKEY V AC L+LS LDLSNNSLSGLP E+GKMTTL
Sbjct: 241 LLSSIPADIGTLSKLGILDLHSNQLKEYPVGACNLKLSFLDLSNNSLSGLPAELGKMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST-TKEDLITMATRLSVTS 359
           RKLLLTGNP+RTLRSSLV+GPT  LLKYLRSRL  +E+   ST TK+D I  A RLS++S
Sbjct: 301 RKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEGSRSTPTKDDQIAAARRLSLSS 360

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           KEL L G+ ++++P+  WE  ++ KLDLS+NSI++LP E
Sbjct: 361 KELDLSGLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNE 399



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 157/353 (44%), Gaps = 67/353 (18%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L + +N +  +  D+  L  L +L++  N+L E P     L  L  LD+S NS+  +
Sbjct: 232 LAELYMGNNLLSSIPADIGTLSKLGILDLHSNQLKEYPVGACNLK-LSFLDLSNNSLSGL 290

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSL--------------------------------- 133
           P E+G  T L K   + N ++ L SSL                                 
Sbjct: 291 PAELGKMTTLRKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEGSRSTPTKDDQI 350

Query: 134 --GRCLNLS--DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL-------------- 175
              R L+LS  +   S   +TS+P    + S + KLD+  N +  L              
Sbjct: 351 AAARRLSLSSKELDLSGLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQSLV 410

Query: 176 -SNNLIASW--TMLTEL--IASKNLLNGMPETIGS-----LSRLIRLDLHQN-RILSIPS 224
            SNN I  W  T+++ L  ++S  L N     I S     LS+L  LDL  N   L  PS
Sbjct: 411 LSNNKIKRWPHTVVSSLPCLSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGNASALPEPS 470

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDL 282
           ++S    L E Y+    L   P  L  L  L  LDL  N L     E  +    L  LDL
Sbjct: 471 AVSALPQLQELYLRRMKLHEFPNGLLGLKLLRILDLSQNHLT-TVPEGIKNFTALIELDL 529

Query: 283 SNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           S+N+++ LP E+G +   L+ L L GNPLR++R +L+   T A+LKYL+ +LP
Sbjct: 530 SDNNITALPAELGLLEANLQVLKLDGNPLRSIRRTLLERGTKAVLKYLKEKLP 582



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 176/379 (46%), Gaps = 32/379 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L LA N +  +   +  LP L  L++  NK++ +P +I     L  L +  N +  I
Sbjct: 186 LTELNLAKNLLTAIPGSIGALPKLIRLDMHQNKITSIPPSIKGCSSLAELYMGNNLLSSI 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRC-LNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P +IG+ + L   D  SNQLKE P  +G C L LS    SNN ++ LP +L   + + KL
Sbjct: 246 PADIGTLSKLGILDLHSNQLKEYP--VGACNLKLSFLDLSNNSLSGLPAELGKMTTLRKL 303

Query: 166 DVEGNKLTVLSNNLIASWT------MLTELIASKNLLNGMP---ETIGSLSRL----IRL 212
            + GN +  L ++L++  T      + + L + +      P   + I +  RL      L
Sbjct: 304 LLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEGSRSTPTKDDQIAAARRLSLSSKEL 363

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE--YCV 270
           DL    + S+P++      + +  +  N++  LP EL   S L +L L +N++K   + V
Sbjct: 364 DLSGLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQSLVLSNNKIKRWPHTV 423

Query: 271 EACQLRLSVLDLSNNSLSGLP-PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
            +    LS L L NN L  +   ++  ++ L  L L+GN      S+L   P P+ +   
Sbjct: 424 VSSLPCLSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGN-----ASAL---PEPSAV--- 472

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
            S LP+ ++      K              + L L   +L+ +P  I     + +LDLS 
Sbjct: 473 -SALPQLQELYLRRMKLHEFPNGLLGLKLLRILDLSQNHLTTVPEGIKNFTALIELDLSD 531

Query: 390 NSIQELPPELSSC-ASLQV 407
           N+I  LP EL    A+LQV
Sbjct: 532 NNITALPAELGLLEANLQV 550


>gi|195640496|gb|ACG39716.1| leucine-rich repeat-containing protein 40 [Zea mays]
          Length = 586

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 264/401 (65%), Positives = 322/401 (80%), Gaps = 3/401 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+RILK+AR SGSLNLSNRSLR++P EVY N D   + +KWWE VDLQKLILAHNN+E L
Sbjct: 1   MERILKSARESGSLNLSNRSLREIPKEVYNNLDTGSQDEKWWEGVDLQKLILAHNNLEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDLRNL  L VLN+SHNK+S LPAAIG+L +LKSLD+SFN I  +P+EIG ATALVK D
Sbjct: 61  REDLRNLSSLVVLNISHNKISSLPAAIGDLPLLKSLDMSFNQINTLPEEIGLATALVKVD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+N L ELP +L  C +LS+ KASNN I+ +P+ LA CSK+SKLD+EGNKL  LS N+ 
Sbjct: 121 FSNNCLTELPPNLATCPDLSELKASNNNISRVPDVLAGCSKLSKLDLEGNKLVALSENMF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            SWTMLTEL  +KNLL  +P +IG+L +LIRLD+HQN+I SIP SI GC SLAE YMGNN
Sbjct: 181 VSWTMLTELNLAKNLLTAIPGSIGALPKLIRLDIHQNKITSIPPSIKGCSSLAELYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS++PA++G LSKLG LDLHSNQLKEY V AC L+LS LDLSNNSLSGLP E+GKMTTL
Sbjct: 241 LLSSIPADIGTLSKLGILDLHSNQLKEYPVGACNLKLSFLDLSNNSLSGLPAELGKMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED---SEASTTKEDLITMATRLSV 357
           RKLLLTGNP+RTLRSSLV+GPT  LLKYLRSRL  +E+   S ++ TK+D I  A RLS+
Sbjct: 301 RKLLLTGNPMRTLRSSLVSGPTTTLLKYLRSRLSSDEEASGSRSTPTKDDQIAAARRLSL 360

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           +SKEL L  + ++++P+  WE  ++ KLDLS+NSI++LP E
Sbjct: 361 SSKELDLSVLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNE 401



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 121/264 (45%), Gaps = 46/264 (17%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S   ++ +PAA  E   +  LD+S NSI  +P+E+   ++L     S+N++K  P +
Sbjct: 365 LDLSVLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQSLVLSNNKIKRWPHT 424

Query: 133 LGRCLN-LSDFKASNNCITSLPE-DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           +   L  LS  K  NN +  +   DL   SK+  LD+ GN   +   + +++   L EL 
Sbjct: 425 VVSSLPCLSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGNASALPEPSAVSALPQLQELY 484

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +  L+  P  +  L  L  LDL QN + ++P  I    +L E  + +N ++ALPAELG
Sbjct: 485 LRRMKLHEFPNGLLGLKLLRILDLSQNHLTTVPEGIKNFTALIELDLSDNNITALPAELG 544

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L                                               L+ L L GNPL
Sbjct: 545 LLE--------------------------------------------ANLQVLKLDGNPL 560

Query: 311 RTLRSSLVNGPTPALLKYLRSRLP 334
           R++R +L+   T A+LKYL+ +LP
Sbjct: 561 RSIRRTLLERGTKAVLKYLKEKLP 584



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 176/382 (46%), Gaps = 36/382 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L LA N +  +   +  LP L  L++  NK++ +P +I     L  L +  N +  I
Sbjct: 186 LTELNLAKNLLTAIPGSIGALPKLIRLDIHQNKITSIPPSIKGCSSLAELYMGNNLLSSI 245

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRC-LNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P +IG+ + L   D  SNQLKE P  +G C L LS    SNN ++ LP +L   + + KL
Sbjct: 246 PADIGTLSKLGILDLHSNQLKEYP--VGACNLKLSFLDLSNNSLSGLPAELGKMTTLRKL 303

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR-------------- 211
            + GN +  L ++L++  T  T L   ++ L+   E  GS S   +              
Sbjct: 304 LLTGNPMRTLRSSLVSGPTT-TLLKYLRSRLSSDEEASGSRSTPTKDDQIAAARRLSLSS 362

Query: 212 --LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE-- 267
             LDL    + S+P++      + +  +  N++  LP EL   S L +L L +N++K   
Sbjct: 363 KELDLSVLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQSLVLSNNKIKRWP 422

Query: 268 YCVEACQLRLSVLDLSNNSLSGLP-PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
           + V +    LS L L NN L  +   ++  ++ L  L L+GN      S+L   P P+ +
Sbjct: 423 HTVVSSLPCLSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGN-----ASAL---PEPSAV 474

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LP+ ++      K              + L L   +L+ +P  I     + +LD
Sbjct: 475 ----SALPQLQELYLRRMKLHEFPNGLLGLKLLRILDLSQNHLTTVPEGIKNFTALIELD 530

Query: 387 LSRNSIQELPPELSSC-ASLQV 407
           LS N+I  LP EL    A+LQV
Sbjct: 531 LSDNNITALPAELGLLEANLQV 552



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           LP L  L +   KL E P  +  L +L+ LD+S N +  +P+ I + TAL++ D S N +
Sbjct: 477 LPQLQELYLRRMKLHEFPNGLLGLKLLRILDLSQNHLTTVPEGIKNFTALIELDLSDNNI 536

Query: 127 KELPSSLGRC-LNLSDFKASNNCITSL 152
             LP+ LG    NL   K   N + S+
Sbjct: 537 TALPAELGLLEANLQVLKLDGNPLRSI 563


>gi|115449939|ref|NP_001048588.1| Os02g0826600 [Oryza sativa Japonica Group]
 gi|48716443|dbj|BAD23050.1| putative disease resistance protein Hcr2-5D [Oryza sativa Japonica
           Group]
 gi|113538119|dbj|BAF10502.1| Os02g0826600 [Oryza sativa Japonica Group]
          Length = 586

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 261/401 (65%), Positives = 318/401 (79%), Gaps = 3/401 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+R+LK+AR SGSLNLSNRSLR+VP EVY N D   + +KWWE VDLQKLILAHNN+E L
Sbjct: 1   MERVLKSARESGSLNLSNRSLREVPKEVYNNLDTGAQDEKWWEGVDLQKLILAHNNLEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDLRNL  L VLN+SHN +S LPAAIG+L +LKSLDVS N I   P+EIG ATALVK D
Sbjct: 61  REDLRNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDVSSNQINAFPEEIGFATALVKVD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CS+N L +LP SL RCL LS+  ASNN I+ LP++LA CSK+ +L++EGNKL  LS+ + 
Sbjct: 121 CSNNCLTDLPVSLARCLELSELNASNNTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            SWTMLTE+ A+KNLL  +P+ IG+LS+LIRLDLHQN+I  IP SI  C SLAEFYMGNN
Sbjct: 181 MSWTMLTEMNAAKNLLTAIPDGIGALSKLIRLDLHQNKITLIPPSIKDCSSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            L+++P ++G LS LG LDLHSNQLKEY V AC+L+LS LDLSNNSLSGLP E+G MTTL
Sbjct: 241 LLTSIPEDIGMLSNLGILDLHSNQLKEYPVGACRLKLSFLDLSNNSLSGLPAELGTMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS---TTKEDLITMATRLSV 357
           RKLLLTGNP+RTLRSSLV+GPT ALLKYLRSRL  +E +  S    TK+D I  A RLS+
Sbjct: 301 RKLLLTGNPMRTLRSSLVSGPTTALLKYLRSRLSSDEGASGSGSTPTKDDQIAAARRLSL 360

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           +SKEL L G+ ++++P   WE  ++ KLDLS+NSI++LP E
Sbjct: 361 SSKELDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPNE 401



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 157/354 (44%), Gaps = 67/354 (18%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +  + +N +  + ED+  L  L +L++  N+L E P     L  L  LD+S NS+  +
Sbjct: 232 LAEFYMGNNLLTSIPEDIGMLSNLGILDLHSNQLKEYPVGACRLK-LSFLDLSNNSLSGL 290

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSL--------------------------------- 133
           P E+G+ T L K   + N ++ L SSL                                 
Sbjct: 291 PAELGTMTTLRKLLLTGNPMRTLRSSLVSGPTTALLKYLRSRLSSDEGASGSGSTPTKDD 350

Query: 134 ----GRCLNLS--DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL------------ 175
                R L+LS  +   S   +TS+P    + + + KLD+  N +  L            
Sbjct: 351 QIAAARRLSLSSKELDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPNELSLCSSLQS 410

Query: 176 ---SNNLIASW--TMLTELIASKNLL---NGMPETIGS----LSRLIRLDLHQN-RILSI 222
              SNN I  W  T+ + L +   L    N + E + +    LS+L  LDL  +   L  
Sbjct: 411 LILSNNKIKRWPGTVFSSLASLSLLKLDNNPLAEILATDLEALSKLEVLDLSGSASSLPE 470

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           PS++S    L E Y+    L   P  L  L  L  LDL  N L         L  L  LD
Sbjct: 471 PSAVSKLPHLKELYLRRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDLTSLIELD 530

Query: 282 LSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LS+N+++ LPPE+G +   L+ L L GNPLR++R +L+   T A+LKYL+ +LP
Sbjct: 531 LSDNNITTLPPELGLLEPNLQVLKLDGNPLRSIRRTLLERGTKAILKYLKEKLP 584


>gi|218191855|gb|EEC74282.1| hypothetical protein OsI_09529 [Oryza sativa Indica Group]
          Length = 1017

 Score =  513 bits (1321), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 261/401 (65%), Positives = 319/401 (79%), Gaps = 3/401 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+R+LK+AR SGSLNLSNRSLR+VP EVY N D   + +KWWE VDLQKLILAHNN+E L
Sbjct: 1   MERVLKSARESGSLNLSNRSLREVPKEVYNNLDTGAQDEKWWEGVDLQKLILAHNNLEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDLRNL  L VLN+SHN +S LPAAIG+L +LKSLDVS N I  +P+EIG ATALVK D
Sbjct: 61  REDLRNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDVSSNQINALPEEIGFATALVKVD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CS+N L +LP SL RCL LS+  ASNN I+ LP++LA CSK+ +L++EGNKL  LS+ + 
Sbjct: 121 CSNNCLTDLPVSLARCLELSELNASNNTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            SWTMLTE+ A+KNLL  +P+ IG+LS+LIRLDLHQN+I  IP SI  C SLAEFYMGNN
Sbjct: 181 MSWTMLTEMNAAKNLLTAIPDGIGALSKLIRLDLHQNKITLIPPSIKDCSSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            L+++P ++G LS LG LDLHSNQLKEY V AC+L+LS LDLSNNSLSGLP E+G MTTL
Sbjct: 241 LLTSIPEDIGMLSNLGILDLHSNQLKEYPVGACRLKLSFLDLSNNSLSGLPAELGTMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS---TTKEDLITMATRLSV 357
           RKLLLTGNP+RTLRSSLV+GPT ALLKYLRSRL  +E +  S    TK+D I  A RLS+
Sbjct: 301 RKLLLTGNPMRTLRSSLVSGPTTALLKYLRSRLSSDEGASGSGSTPTKDDQIAAARRLSL 360

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           +SKEL L G+ ++++P   WE  ++ KLDLS+NSI++LP E
Sbjct: 361 SSKELDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPNE 401



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 184/408 (45%), Gaps = 52/408 (12%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG-ELHMLKSLDVSFNSI 103
           ++L +L  ++N I  L ++L     L  LN+  NKL  L   +     ML  ++ + N +
Sbjct: 137 LELSELNASNNTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLL 196

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             IPD IG+ + L++ D   N++  +P S+  C +L++F   NN +TS+PED+   S + 
Sbjct: 197 TAIPDGIGALSKLIRLDLHQNKITLIPPSIKDCSSLAEFYMGNNLLTSIPEDIGMLSNLG 256

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            LD+  N+L      + A    L+ L  S N L+G+P  +G+++ L +L L  N + ++ 
Sbjct: 257 ILDLHSNQLKEYP--VGACRLKLSFLDLSNNSLSGLPAELGTMTTLRKLLLTGNPMRTLR 314

Query: 224 SS-ISGCCSLAEFYM--------GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           SS +SG  +    Y+        G +   + P +  +++    L L S +L    +    
Sbjct: 315 SSLVSGPTTALLKYLRSRLSSDEGASGSGSTPTKDDQIAAARRLSLSSKELDLSGLGVTS 374

Query: 275 LRLSV--------LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV-------- 318
           +  +         LDLS NS+  LP E+   ++L+ L+L+ N ++    ++         
Sbjct: 375 VPPAAWETNDVMKLDLSKNSIEDLPNELSLCSSLQSLILSNNKIKRWPGTVFSSLASLSL 434

Query: 319 ----NGPTPALLKYLRSRLPENEDSEASTTKE--DLITMATRLSVTS--------KELSL 364
               N P   +L           D EA +  E  DL   A+ L   S        KEL L
Sbjct: 435 LKLDNNPLAEILA---------TDLEALSKLEVLDLSGSASSLPEPSAVSKLPHLKELYL 485

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL-QVKFSD 411
             M L   P  +     +  LDLS+N +  +P  +    SL ++  SD
Sbjct: 486 RRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDLTSLIELDLSD 533



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 3/204 (1%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S   ++ +P A  E + +  LD+S NSI  +P+E+   ++L     S+N++K  P +
Sbjct: 365 LDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPNELSLCSSLQSLILSNNKIKRWPGT 424

Query: 133 LGRCLNLSDFKASNNCITS--LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           +   L        +N   +  L  DL   SK+  LD+ G+  ++   + ++    L EL 
Sbjct: 425 VFSSLASLSLLKLDNNPLAEILATDLEALSKLEVLDLSGSASSLPEPSAVSKLPHLKELY 484

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +  L+G P+++  L  L  LDL QN + S+P  I    SL E  + +N ++ LP ELG
Sbjct: 485 LRRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDLTSLIELDLSDNNITTLPPELG 544

Query: 251 KLS-KLGTLDLHSNQLKEYCVEAC 273
            L   L  L L  N L+      C
Sbjct: 545 LLEPNLQVLKLDGNPLRRVIDVKC 568


>gi|222623959|gb|EEE58091.1| hypothetical protein OsJ_08960 [Oryza sativa Japonica Group]
          Length = 939

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/401 (65%), Positives = 318/401 (79%), Gaps = 3/401 (0%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+R+LK+AR SGSLNLSNRSLR+VP EVY N D   + +KWWE VDLQKLILAHNN+E L
Sbjct: 1   MERVLKSARESGSLNLSNRSLREVPKEVYNNLDTGAQDEKWWEGVDLQKLILAHNNLEVL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +EDLRNL  L VLN+SHN +S LPAAIG+L +LKSLDVS N I   P+EIG ATALVK D
Sbjct: 61  REDLRNLSSLVVLNISHNNISSLPAAIGDLPLLKSLDVSSNQINAFPEEIGFATALVKVD 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           CS+N L +LP SL RCL LS+  ASNN I+ LP++LA CSK+ +L++EGNKL  LS+ + 
Sbjct: 121 CSNNCLTDLPVSLARCLELSELNASNNTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            SWTMLTE+ A+KNLL  +P+ IG+LS+LIRLDLHQN+I  IP SI  C SLAEFYMGNN
Sbjct: 181 MSWTMLTEMNAAKNLLTAIPDGIGALSKLIRLDLHQNKITLIPPSIKDCSSLAEFYMGNN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            L+++P ++G LS LG LDLHSNQLKEY V AC+L+LS LDLSNNSLSGLP E+G MTTL
Sbjct: 241 LLTSIPEDIGMLSNLGILDLHSNQLKEYPVGACRLKLSFLDLSNNSLSGLPAELGTMTTL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS---TTKEDLITMATRLSV 357
           RKLLLTGNP+RTLRSSLV+GPT ALLKYLRSRL  +E +  S    TK+D I  A RLS+
Sbjct: 301 RKLLLTGNPMRTLRSSLVSGPTTALLKYLRSRLSSDEGASGSGSTPTKDDQIAAARRLSL 360

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           +SKEL L G+ ++++P   WE  ++ KLDLS+NSI++LP E
Sbjct: 361 SSKELDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPNE 401



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 184/408 (45%), Gaps = 52/408 (12%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG-ELHMLKSLDVSFNSI 103
           ++L +L  ++N I  L ++L     L  LN+  NKL  L   +     ML  ++ + N +
Sbjct: 137 LELSELNASNNTISVLPDELAGCSKLFRLNLEGNKLVTLSDKMFMSWTMLTEMNAAKNLL 196

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             IPD IG+ + L++ D   N++  +P S+  C +L++F   NN +TS+PED+   S + 
Sbjct: 197 TAIPDGIGALSKLIRLDLHQNKITLIPPSIKDCSSLAEFYMGNNLLTSIPEDIGMLSNLG 256

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            LD+  N+L      + A    L+ L  S N L+G+P  +G+++ L +L L  N + ++ 
Sbjct: 257 ILDLHSNQLKEYP--VGACRLKLSFLDLSNNSLSGLPAELGTMTTLRKLLLTGNPMRTLR 314

Query: 224 SS-ISGCCSLAEFYM--------GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           SS +SG  +    Y+        G +   + P +  +++    L L S +L    +    
Sbjct: 315 SSLVSGPTTALLKYLRSRLSSDEGASGSGSTPTKDDQIAAARRLSLSSKELDLSGLGVTS 374

Query: 275 LRLSV--------LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV-------- 318
           +  +         LDLS NS+  LP E+   ++L+ L+L+ N ++    ++         
Sbjct: 375 VPPAAWETNDVMKLDLSKNSIEDLPNELSLCSSLQSLILSNNKIKRWPGTVFSSLASLSL 434

Query: 319 ----NGPTPALLKYLRSRLPENEDSEASTTKE--DLITMATRLSVTS--------KELSL 364
               N P   +L           D EA +  E  DL   A+ L   S        KEL L
Sbjct: 435 LKLDNNPLAEILA---------TDLEALSKLEVLDLSGSASSLPEPSAVSKLPHLKELYL 485

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL-QVKFSD 411
             M L   P  +     +  LDLS+N +  +P  +    SL ++  SD
Sbjct: 486 RRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDLTSLIELDLSD 533



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 3/204 (1%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S   ++ +P A  E + +  LD+S NSI  +P+E+   ++L     S+N++K  P +
Sbjct: 365 LDLSGLGVTSVPPAAWETNDVMKLDLSKNSIEDLPNELSLCSSLQSLILSNNKIKRWPGT 424

Query: 133 LGRCLNLSDFKASNNCITS--LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           +   L        +N   +  L  DL   SK+  LD+ G+  ++   + ++    L EL 
Sbjct: 425 VFSSLASLSLLKLDNNPLAEILATDLEALSKLEVLDLSGSASSLPEPSAVSKLPHLKELY 484

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +  L+G P+++  L  L  LDL QN + S+P  I    SL E  + +N ++ LP ELG
Sbjct: 485 LRRMKLHGFPDSLLGLKLLRILDLSQNYLTSVPEGIKDLTSLIELDLSDNNITTLPPELG 544

Query: 251 KLS-KLGTLDLHSNQLKEYCVEAC 273
            L   L  L L  N L+      C
Sbjct: 545 LLEPNLQVLKLDGNPLRRVIDVKC 568


>gi|302822487|ref|XP_002992901.1| hypothetical protein SELMODRAFT_136157 [Selaginella moellendorffii]
 gi|300139246|gb|EFJ05990.1| hypothetical protein SELMODRAFT_136157 [Selaginella moellendorffii]
          Length = 584

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/406 (54%), Positives = 299/406 (73%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+R+LK AR SGSL+LSNR+LR+VP +VYK  +  G+ +KWWE VDL +L+LAHN I+ L
Sbjct: 1   MERLLKMARASGSLDLSNRNLREVPPQVYKLLECVGQDEKWWELVDLHRLVLAHNKIKLL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            ++L NL  + VLN+S+N+L  LP +IG L  LK+LDVS N+I+++P EIG+  +LVKF 
Sbjct: 61  SQELGNLVSVVVLNISYNELESLPESIGMLTSLKTLDVSHNAILELPVEIGNLASLVKFL 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+NQ+KELPS++G C++L++ K SNN +T LP+ LA CS++  L +EGNK+T   ++L 
Sbjct: 121 ASNNQIKELPSTIGLCVDLAELKLSNNGLTFLPDQLASCSRLISLSIEGNKITGFPSSLF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            S   LTEL A KN +  +PE IG+L+RL+RLDLHQN+I SIPSS+  C  L E Y G+N
Sbjct: 181 HSLGNLTELNAGKNAITELPEEIGNLTRLLRLDLHQNKIKSIPSSLVNCSMLVEAYFGDN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS+LP E+G L  L T DLH NQL E+ V AC +RLSVLDLSNN+LSGLPPE+G M +L
Sbjct: 241 LLSSLPNEIGNLQSLLTFDLHGNQLSEFPVSACSMRLSVLDLSNNNLSGLPPELGFMGSL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           RKL+LTGNPLRTLR+SLV G TPALLKYLR R    + +      ++ +  A R +V+SK
Sbjct: 301 RKLVLTGNPLRTLRTSLVTGSTPALLKYLRDRSTAEDGNIFGMNIQEQVVQAARAAVSSK 360

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            LSL   NL  +P  +WE+ ++ +LDL++N IQELPPE+S C S++
Sbjct: 361 ALSLSDKNLDHVPPAVWESCDLVQLDLAKNCIQELPPEMSMCTSME 406



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 146/308 (47%), Gaps = 42/308 (13%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI--GSATALVKF-------- 119
           L+VL++S+N LS LP  +G +  L+ L ++ N +  +   +  GS  AL+K+        
Sbjct: 277 LSVLDLSNNNLSGLPPELGFMGSLRKLVLTGNPLRTLRTSLVTGSTPALLKYLRDRSTAE 336

Query: 120 --------------------------DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
                                       S   L  +P ++    +L     + NCI  LP
Sbjct: 337 DGNIFGMNIQEQVVQAARAAVSSKALSLSDKNLDHVPPAVWESCDLVQLDLAKNCIQELP 396

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLSRLIRL 212
            +++ C+ M  L +  NK+     ++ AS   L  L  ++N +  +P     ++S L  L
Sbjct: 397 PEMSMCTSMEALILADNKIQEWPGSVFASLPNLKHLNLARNPIVALPPGAFSAVSNLQLL 456

Query: 213 DLHQNRI-LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ---LKEY 268
           DL      L  P  +S    L E  +    ++A+P +L ++S L  LDL  N    L + 
Sbjct: 457 DLSGVVAQLPPPPCLSLMTGLQELRLMRTQMAAIPWDLPRMSSLRILDLSQNNISVLPQA 516

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
            + +  + L  LDL++N+LS LPP++G +  TLRKL + GNPLR++R  ++   T  LL+
Sbjct: 517 SLLSSFITLEELDLTDNNLSTLPPQLGYLEPTLRKLKVDGNPLRSIRRGILERGTKELLQ 576

Query: 328 YLRSRLPE 335
           YL  +LP+
Sbjct: 577 YLHGKLPQ 584



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 23/247 (9%)

Query: 2   DRILKAAR---TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIE 58
           +++++AAR   +S +L+LS+++L  VP  V             WE+ DL +L LA N I+
Sbjct: 347 EQVVQAARAAVSSKALSLSDKNLDHVPPAV-------------WESCDLVQLDLAKNCIQ 393

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALV 117
           +L  ++     +  L ++ NK+ E P ++   L  LK L+++ N I+ +P    SA + +
Sbjct: 394 ELPPEMSMCTSMEALILADNKIQEWPGSVFASLPNLKHLNLARNPIVALPPGAFSAVSNL 453

Query: 118 KFDCSSNQLKELPSS--LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           +    S  + +LP    L     L + +     + ++P DL   S +  LD+  N ++VL
Sbjct: 454 QLLDLSGVVAQLPPPPCLSLMTGLQELRLMRTQMAAIPWDLPRMSSLRILDLSQNNISVL 513

Query: 176 SN-NLIASWTMLTELIASKNLLNGMPETIGSLSRLIR-LDLHQNRILSIPSSI--SGCCS 231
              +L++S+  L EL  + N L+ +P  +G L   +R L +  N + SI   I   G   
Sbjct: 514 PQASLLSSFITLEELDLTDNNLSTLPPQLGYLEPTLRKLKVDGNPLRSIRRGILERGTKE 573

Query: 232 LAEFYMG 238
           L ++  G
Sbjct: 574 LLQYLHG 580


>gi|302796795|ref|XP_002980159.1| hypothetical protein SELMODRAFT_112095 [Selaginella moellendorffii]
 gi|300152386|gb|EFJ19029.1| hypothetical protein SELMODRAFT_112095 [Selaginella moellendorffii]
          Length = 584

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/406 (54%), Positives = 299/406 (73%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+R+LK AR SGSL+LSNR+LR+VP +VYK  +  G+ +KWWE VDL +L+LAHN I+ L
Sbjct: 1   MERLLKMARASGSLDLSNRNLREVPPQVYKLLECVGQDEKWWELVDLHRLVLAHNKIKLL 60

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            ++L NL  + VLN+S+N+L  LP +IG L  LK+LDVS N+I+++P EIG+  +LVKF 
Sbjct: 61  SQELGNLVSVVVLNISYNELESLPESIGMLTSLKTLDVSHNAILELPVEIGNLASLVKFL 120

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+NQ+KEL S++G C++L++ K SNN +T LP+ LA CS++  L +EGNK+T   ++L 
Sbjct: 121 ASNNQIKELASTIGLCVDLAELKLSNNGLTFLPDQLASCSRLISLSIEGNKITGFPSSLF 180

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            S   LTEL A KN +  +PE IG+L+RL+RLDLHQN+I SIPSS+  C  L E Y G+N
Sbjct: 181 HSLGNLTELNAGKNAITELPEEIGNLTRLLRLDLHQNKIKSIPSSLVNCSMLVEAYFGDN 240

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            LS+LP E+G L  L T DLH NQL E+ V AC +RLSVLDLSNN+LSGLPPE+G M +L
Sbjct: 241 LLSSLPNEIGNLQSLLTFDLHGNQLSEFPVSACSMRLSVLDLSNNNLSGLPPELGFMGSL 300

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           RKL+LTGNPLRTLR+SLV G TPALLKYLR R    + +      ++ +  A R++V+SK
Sbjct: 301 RKLVLTGNPLRTLRTSLVTGSTPALLKYLRDRSTAEDGNIFGMNIQEQVVQAARVAVSSK 360

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            LSL   NL  +P  +WE+ ++ +LDL++N IQELPPE+S C S++
Sbjct: 361 ALSLSDKNLDHVPPAVWESCDLVQLDLAKNCIQELPPEMSMCTSME 406



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 147/308 (47%), Gaps = 42/308 (13%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI--GSATALVKF-------- 119
           L+VL++S+N LS LP  +G +  L+ L ++ N +  +   +  GS  AL+K+        
Sbjct: 277 LSVLDLSNNNLSGLPPELGFMGSLRKLVLTGNPLRTLRTSLVTGSTPALLKYLRDRSTAE 336

Query: 120 --------------------------DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
                                       S   L  +P ++    +L     + NCI  LP
Sbjct: 337 DGNIFGMNIQEQVVQAARVAVSSKALSLSDKNLDHVPPAVWESCDLVQLDLAKNCIQELP 396

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLSRLIRL 212
            +++ C+ M  L +  NK+     ++ AS   L  L  ++N +  +P     ++S L  L
Sbjct: 397 PEMSMCTSMEALILADNKIQEWPGSVFASLPNLKHLNLARNPIVALPPGAFSAVSNLQLL 456

Query: 213 DLHQNRI-LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ---LKEY 268
           DL      L  P  +S    L E  +    ++A+P +L ++S L  LDL  N    L + 
Sbjct: 457 DLSGVVAQLLPPPCLSLMTGLQELRLMRTQMAAIPWDLPRMSSLRILDLSQNNISVLPQA 516

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
            + +  + L  LDL++N+LS LPP++G +  TLRKL + GNPLR++R  ++   T ALL+
Sbjct: 517 SLLSSFITLEELDLTDNNLSTLPPQLGYLEPTLRKLKVDGNPLRSIRRGILERGTKALLQ 576

Query: 328 YLRSRLPE 335
           YL  +LP+
Sbjct: 577 YLHGKLPQ 584



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 124/247 (50%), Gaps = 23/247 (9%)

Query: 2   DRILKAAR---TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIE 58
           +++++AAR   +S +L+LS+++L  VP  V             WE+ DL +L LA N I+
Sbjct: 347 EQVVQAARVAVSSKALSLSDKNLDHVPPAV-------------WESCDLVQLDLAKNCIQ 393

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALV 117
           +L  ++     +  L ++ NK+ E P ++   L  LK L+++ N I+ +P    SA + +
Sbjct: 394 ELPPEMSMCTSMEALILADNKIQEWPGSVFASLPNLKHLNLARNPIVALPPGAFSAVSNL 453

Query: 118 KFDCSSNQLKEL--PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           +    S  + +L  P  L     L + +     + ++P DL   S +  LD+  N ++VL
Sbjct: 454 QLLDLSGVVAQLLPPPCLSLMTGLQELRLMRTQMAAIPWDLPRMSSLRILDLSQNNISVL 513

Query: 176 SN-NLIASWTMLTELIASKNLLNGMPETIGSLSRLIR-LDLHQNRILSIPSSI--SGCCS 231
              +L++S+  L EL  + N L+ +P  +G L   +R L +  N + SI   I   G  +
Sbjct: 514 PQASLLSSFITLEELDLTDNNLSTLPPQLGYLEPTLRKLKVDGNPLRSIRRGILERGTKA 573

Query: 232 LAEFYMG 238
           L ++  G
Sbjct: 574 LLQYLHG 580


>gi|168059285|ref|XP_001781634.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666948|gb|EDQ53590.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 604

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 221/430 (51%), Positives = 301/430 (70%), Gaps = 19/430 (4%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           ++R++KAA++SGSLNLSNR L +VP  VY   +E G  +KWWE V++ KL ++HN+I  +
Sbjct: 7   IERLIKAAKSSGSLNLSNRGLAEVPPRVYNLLNEGGSEEKWWEVVEIHKLDISHNSIAAI 66

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            + L ++  LT LN+SHN+LS LP AIG L +LK LD+S NS++++P E+G  TALV+ +
Sbjct: 67  SDRLGDIGSLTFLNLSHNQLSFLPPAIGNLSLLKILDISGNSVVELPSELGFLTALVRLN 126

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           C+SN L +L SSLG C  L D KA NN + +LPE+L +CSK+S L++E N+L+ LS +L 
Sbjct: 127 CASNSLSKLSSSLGNCTELVDLKAHNNLLVTLPEELGNCSKLSTLNIESNRLSELSESLF 186

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ++ + LTELIA +N L  +P ++G LS+LIRLDLHQNR+  +P +I+GC +L E Y+G+N
Sbjct: 187 SALSGLTELIAGRNSLTALPNSLGRLSKLIRLDLHQNRLTYLPPTIAGCVALMELYLGDN 246

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            L  +P E+G L  L  LDLHSNQL E+  +AC LRLS+LDLSNN+LSGLP E+G MT+L
Sbjct: 247 LLKVVPDEIGSLKSLSNLDLHSNQLTEFSAKACLLRLSLLDLSNNNLSGLPAELGAMTSL 306

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE-------------ASTTKED 347
           RKLLL GNP+R+LRS+LV GPTPALLKYL+SR+P+ E                 +    D
Sbjct: 307 RKLLLVGNPMRSLRSTLVMGPTPALLKYLQSRIPQTEAEAEADEQAPATGNVFGTIGLSD 366

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            I  A+R +  SK LSL   NLS IP   WE  +IT LDLS N I+ LP EL+ C++L+V
Sbjct: 367 QIVHASRQATASKVLSLPKKNLSEIPPAAWEGADITTLDLSHNQIKVLPTELAMCSALEV 426

Query: 408 ------KFSD 411
                 KFS+
Sbjct: 427 LMLSNNKFSE 436



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 183/429 (42%), Gaps = 83/429 (19%)

Query: 43  EAVDLQKLILAHNNI-EKLKEDLRNLPLLTVLNVSHNKLSELPAAI-GELHMLKSLDVSF 100
           E VDL+    AHNN+   L E+L N   L+ LN+  N+LSEL  ++   L  L  L    
Sbjct: 144 ELVDLK----AHNNLLVTLPEELGNCSKLSTLNIESNRLSELSESLFSALSGLTELIAGR 199

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           NS+  +P+ +G  + L++ D   N+L  LP ++  C+ L +    +N +  +P+++    
Sbjct: 200 NSLTALPNSLGRLSKLIRLDLHQNRLTYLPPTIAGCVALMELYLGDNLLKVVPDEIGSLK 259

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            +S LD+  N+LT  S    A    L+ L  S N L+G+P  +G+++ L +L L  N + 
Sbjct: 260 SLSNLDLHSNQLTEFSAK--ACLLRLSLLDLSNNNLSGLPAELGAMTSLRKLLLVGNPMR 317

Query: 221 SIPSS-----------------------------------ISGCCSLAE----------- 234
           S+ S+                                   + G   L++           
Sbjct: 318 SLRSTLVMGPTPALLKYLQSRIPQTEAEAEADEQAPATGNVFGTIGLSDQIVHASRQATA 377

Query: 235 ---FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGL 290
                +    LS +P    + + + TLDL  NQ+K    E A    L VL LSNN  S  
Sbjct: 378 SKVLSLPKKNLSEIPPAAWEGADITTLDLSHNQIKVLPTELAMCSALEVLMLSNNKFSEW 437

Query: 291 PPEI-GKMTTLRKLLLTGNPLRTL-RSSLVNGPTPALLKY-----------LRSRLPENE 337
           P  + G +  L +LLL  NP R   + + V      +L               + +P  +
Sbjct: 438 PGAVLGSIPNLHELLLAYNPFREFPQGAFVAVAKLTVLDLSGVPARLPPPPALAEMPNLQ 497

Query: 338 D-----SEASTTKEDLITMAT-RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
           +     ++    +EDL ++   R+   S+        +S IP  +     +  LD+S N+
Sbjct: 498 ELRLKRAQLQDFREDLKSLQKLRILDVSQNF------ISVIPEWVTCLARLETLDISDNN 551

Query: 392 IQELPPELS 400
           I +LPP+L 
Sbjct: 552 ISQLPPKLG 560



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 140/298 (46%), Gaps = 13/298 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL+L  N +  L+  L   P   +L    +++ +  A         +    F +I  +
Sbjct: 306 LRKLLLVGNPMRSLRSTLVMGPTPALLKYLQSRIPQTEAEAEADEQAPATGNVFGTI-GL 364

Query: 107 PDEI----GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
            D+I      ATA          L E+P +     +++    S+N I  LP +LA CS +
Sbjct: 365 SDQIVHASRQATASKVLSLPKKNLSEIPPAAWEGADITTLDLSHNQIKVLPTELAMCSAL 424

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQ-NRIL 220
             L +  NK +     ++ S   L EL+ + N     P+    ++++L  LDL      L
Sbjct: 425 EVLMLSNNKFSEWPGAVLGSIPNLHELLLAYNPFREFPQGAFVAVAKLTVLDLSGVPARL 484

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN---QLKEYCVEACQLRL 277
             P +++   +L E  +    L     +L  L KL  LD+  N    + E+    C  RL
Sbjct: 485 PPPPALAEMPNLQELRLKRAQLQDFREDLKSLQKLRILDVSQNFISVIPEWVT--CLARL 542

Query: 278 SVLDLSNNSLSGLPPEIGKM-TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             LD+S+N++S LPP++G +  TL+ L + GNPLR++R  ++   T  LL+YL+ R+P
Sbjct: 543 ETLDISDNNISQLPPKLGLLEPTLKHLKVDGNPLRSIRRPILEKGTKTLLQYLQDRIP 600



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 97/239 (40%), Gaps = 57/239 (23%)

Query: 2   DRILKAAR---TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIE 58
           D+I+ A+R    S  L+L  ++L ++P                WE  D+  L L+HN I+
Sbjct: 366 DQIVHASRQATASKVLSLPKKNLSEIPPAA-------------WEGADITTLDLSHNQIK 412

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATA-L 116
            L  +L     L VL +S+NK SE P A+ G +  L  L +++N   + P     A A L
Sbjct: 413 VLPTELAMCSALEVLMLSNNKFSEWPGAVLGSIPNLHELLLAYNPFREFPQGAFVAVAKL 472

Query: 117 VKFDCSS--------NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
              D S           L E+P       NL + +     +    EDL    K+  LDV 
Sbjct: 473 TVLDLSGVPARLPPPPALAEMP-------NLQELRLKRAQLQDFREDLKSLQKLRILDV- 524

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
                                  S+N ++ +PE +  L+RL  LD+  N I  +P  + 
Sbjct: 525 -----------------------SQNFISVIPEWVTCLARLETLDISDNNISQLPPKLG 560


>gi|255085884|ref|XP_002505373.1| predicted protein [Micromonas sp. RCC299]
 gi|226520642|gb|ACO66631.1| predicted protein [Micromonas sp. RCC299]
          Length = 621

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/411 (35%), Positives = 231/411 (56%), Gaps = 22/411 (5%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           +D++L +A+++G LNLS+R + ++P  V+ +  E+G G  WWE  +L  L+ +HN+I +L
Sbjct: 18  VDKLLLSAQSTGVLNLSDRGMTEIPRAVF-DAPESG-GPAWWEVKELTALVASHNSIAQL 75

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            ED+  L  L  L++ HN+L  LPA       L+SLDVS N +  +PD +   T L   +
Sbjct: 76  PEDVAKLNALQKLDLGHNQLESLPATALASLPLRSLDVSDNKLRMLPDALPVET-LAALN 134

Query: 121 CSSN-QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
            S N +L +LP S+G C  L++ + +   +T LP  +  C+ +  LD+  N++  L + +
Sbjct: 135 VSRNPKLFKLPESIGACDRLAELRVAGCALTELPRAIDGCTSLVTLDISNNRIGTLPDGM 194

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
                 L +L  S N L  +P  +G+ + L RLD  +NRI  +P SISGC +LAE ++G 
Sbjct: 195 -TRLASLRDLCVSGNALTALPRDVGAFTSLTRLDCRENRITCVPPSISGCSNLAEIFIGR 253

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMT 298
           N L+ALP  LG  + L TLD+ SN+L E     A    L  +D S N ++ + PE+G+ T
Sbjct: 254 NELTALPDALGTCAALATLDVSSNRLTELPSSLAAGAPLRTVDASGNDVTRVAPELGRCT 313

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS--------EASTTKEDLIT 350
           +LR+L L GNP+R++R ++++GP   LL +LRS+L   E          E++T  ED   
Sbjct: 314 SLRRLALEGNPIRSIRQNILSGPIGDLLAHLRSKLGAEETGVGAAFRGDESTTRAEDAAR 373

Query: 351 MATRLSVTSKE------LSLEGMNLSAIPSEIWE--AGEITKLDLSRNSIQ 393
                +  + E      +SL G  L ++P + W   A  +T +DL  N ++
Sbjct: 374 AVATAARVASEGGRASGVSLRGQRLESLPDDFWSVVARGVTSVDLGENGLR 424



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 168/398 (42%), Gaps = 50/398 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L ++ N +  L  D+     LT L+   N+++ +P +I     L  + +  N +  +
Sbjct: 200 LRDLCVSGNALTALPRDVGAFTSLTRLDCRENRITCVPPSISGCSNLAEIFIGRNELTAL 259

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +G+  AL   D SSN+L ELPSSL     L    AS N +T +  +L  C+ + +L 
Sbjct: 260 PDALGTCAALATLDVSSNRLTELPSSLAAGAPLRTVDASGNDVTRVAPELGRCTSLRRLA 319

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET-IGSL------------------- 206
           +EGN +  +  N+++    + +L+A      G  ET +G+                    
Sbjct: 320 LEGNPIRSIRQNILSG--PIGDLLAHLRSKLGAEETGVGAAFRGDESTTRAEDAARAVAT 377

Query: 207 --------SRLIRLDLHQNRILSIPSSISGCCS--LAEFYMGNNALSAL--PAELGKLSK 254
                    R   + L   R+ S+P       +  +    +G N L       E+ +   
Sbjct: 378 AARVASEGGRASGVSLRGQRLESLPDDFWSVVARGVTSVDLGENGLRGGVDAEEVERCDG 437

Query: 255 LGTLDLHSNQLKEY---CVEACQLRLSVLDLSNNS--LSGLPPE-IGKMTTLRKLLLTGN 308
           L TL L  N L+++   C E   L L+ L+L+ N    + +PP    + + LRKL +TG 
Sbjct: 438 LETLLLDGNALEKWPLPCGEGRPLSLTELNLAGNKGLSAAMPPSAFSRASRLRKLDVTGI 497

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
             +  R        P LL+ L   L E    +A     D I          + L L   +
Sbjct: 498 VFQPSRG-------PNLLRPLAETLTELRWGKAML---DAIPDEVFDLRRLRVLRLNDNH 547

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           + A+   +    E+ +LDL+ N +  LPPEL     L+
Sbjct: 548 IGALSPAVARLVELDELDLTNNDLGTLPPELGLLTGLR 585



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 129/270 (47%), Gaps = 17/270 (6%)

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           L+   AS+N I  LPED+A  + + KLD+  N+L  L    +AS   L  L  S N L  
Sbjct: 62  LTALVASHNSIAQLPEDVAKLNALQKLDLGHNQLESLPATALASLP-LRSLDVSDNKLRM 120

Query: 199 MPETIGSLSRLIRLDLHQN-RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
           +P+ +  +  L  L++ +N ++  +P SI  C  LAE  +   AL+ LP  +   + L T
Sbjct: 121 LPDAL-PVETLAALNVSRNPKLFKLPESIGACDRLAELRVAGCALTELPRAIDGCTSLVT 179

Query: 258 LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           LD+ +N++        +L  L  L +S N+L+ LP ++G  T+L +L    N +  +  S
Sbjct: 180 LDISNNRIGTLPDGMTRLASLRDLCVSGNALTALPRDVGAFTSLTRLDCRENRITCVPPS 239

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +      A +   R+ L    D+  +        +AT L V+S  L+        +PS +
Sbjct: 240 ISGCSNLAEIFIGRNELTALPDALGTCA-----ALAT-LDVSSNRLT-------ELPSSL 286

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                +  +D S N +  + PEL  C SL+
Sbjct: 287 AAGAPLRTVDASGNDVTRVAPELGRCTSLR 316



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 90/185 (48%), Gaps = 20/185 (10%)

Query: 168 EGNKLTVLSNNLIASWTM---------LTEL--IASKNLLNGMPETIGS-LSRLIRLDLH 215
           +G +  +L  N +  W +         LTEL    +K L   MP +  S  SRL +LD+ 
Sbjct: 436 DGLETLLLDGNALEKWPLPCGEGRPLSLTELNLAGNKGLSAAMPPSAFSRASRLRKLDVT 495

Query: 216 QNRILSIPSSISGCC-----SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
              I+  PS           +L E   G   L A+P E+  L +L  L L+ N +     
Sbjct: 496 G--IVFQPSRGPNLLRPLAETLTELRWGKAMLDAIPDEVFDLRRLRVLRLNDNHIGALSP 553

Query: 271 EACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              +L  L  LDL+NN L  LPPE+G +T LR L + GN LR +R  ++   T ALL+YL
Sbjct: 554 AVARLVELDELDLTNNDLGTLPPELGLLTGLRWLGVEGNMLRMIRRPVIERGTKALLEYL 613

Query: 330 RSRLP 334
           R +LP
Sbjct: 614 RDKLP 618



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 43/228 (18%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           LT L+AS N +  +PE +  L+ L +LDL  N++ S+P++      L    + +N L  L
Sbjct: 62  LTALVASHNSIAQLPEDVAKLNALQKLDLGHNQLESLPATALASLPLRSLDVSDNKLRML 121

Query: 246 PAELGKLSKLGTLDLHSN----QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           P  L  +  L  L++  N    +L E  + AC  RL+ L ++  +L+ LP  I   T+L 
Sbjct: 122 PDAL-PVETLAALNVSRNPKLFKLPES-IGACD-RLAELRVAGCALTELPRAIDGCTSLV 178

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L ++ N + TL   +                                   TRL+ + ++
Sbjct: 179 TLDISNNRIGTLPDGM-----------------------------------TRLA-SLRD 202

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           L + G  L+A+P ++     +T+LD   N I  +PP +S C++L   F
Sbjct: 203 LCVSGNALTALPRDVGAFTSLTRLDCRENRITCVPPSISGCSNLAEIF 250


>gi|443730785|gb|ELU16143.1| hypothetical protein CAPTEDRAFT_182426 [Capitella teleta]
          Length = 610

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 157/452 (34%), Positives = 248/452 (54%), Gaps = 34/452 (7%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEAGEG---------DKWWEAVDLQKLI 51
           + ILK  R SG LNLS RSL +VP  V+K N D   E          ++WWE VDL KLI
Sbjct: 31  ETILKQGRKSGQLNLSGRSLTEVPQSVWKINIDVPKESSNISLGTTDERWWEQVDLSKLI 90

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           LA N +  L ED+  LP LTVL+V  N+L+ LP A+ +L  L+ L++S NS+  +P+ I 
Sbjct: 91  LASNALTSLSEDIAQLPALTVLDVHDNQLNSLPEALCQLENLQKLNLSHNSLKALPESIC 150

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL+ LP  +GR   L +  AS+N + +LP  +    ++ K ++  N 
Sbjct: 151 QLPRLQFLYIQNNQLEALPEDIGRLALLEELDASHNKLPTLPTSIKFLERVMKFNMSNNN 210

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L V+ +  I+    L  L A+ N L+ +P+ +G L++L +L L  NR+  +P S+  C +
Sbjct: 211 LNVIVHE-ISGMQGLRTLDATHNQLHTLPDDLGHLNKLEQLYLRHNRLTHLP-SLQHCTA 268

Query: 232 LAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           L E ++GNNA+  L  E L ++  +  LDL  N+L +   E   L+ L  LDL+NN++S 
Sbjct: 269 LKELHLGNNAIQGLSEEQLREMHSVSVLDLRDNRLTKVPSEIVLLQMLERLDLTNNNISA 328

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS------EAST 343
           LP E+G +  L+ ++L GNPL+++R  ++   T  L KYLRSR+ E+  +      ++S 
Sbjct: 329 LPYELGTLPNLKSIVLDGNPLKSIRRDIIMRGTNELKKYLRSRMAESAPTAPQSAVQSSK 388

Query: 344 TKEDLITMAT-----RLSVTSKELSLEGMNLSAIPSEIW---EAGEITKLDLSRNSIQEL 395
               ++  A+      L  +SK L      ++AIP E+W   ++G +T ++ S+N + + 
Sbjct: 389 GTSGIVGGASSGVDPHLVSSSKALDYSEKKVTAIPDELWAVAQSGGVTIVNFSKNQLTQY 448

Query: 396 PPELSSCAS----LQVKFSDLVTNKESCISGC 423
           P ++ S       L + F+ L T   S   GC
Sbjct: 449 PKQIESLKDSLCELNLSFNKLTTIDASI--GC 478



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 170/341 (49%), Gaps = 53/341 (15%)

Query: 47  LQKLILAHNNIEKLKED-LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L L +N I+ L E+ LR +  ++VL++  N+L+++P+ I  L ML+ LD++ N+I  
Sbjct: 269 LKELHLGNNAIQGLSEEQLREMHSVSVLDLRDNRLTKVPSEIVLLQMLERLDLTNNNISA 328

Query: 106 IPDEIGSATALVKFDCSSNQLKEL------------------------PSSLGRCLN--- 138
           +P E+G+   L       N LK +                        P++    +    
Sbjct: 329 LPYELGTLPNLKSIVLDGNPLKSIRRDIIMRGTNELKKYLRSRMAESAPTAPQSAVQSSK 388

Query: 139 -----------------LSDFKA---SNNCITSLPEDL---ADCSKMSKLDVEGNKLTVL 175
                            +S  KA   S   +T++P++L   A    ++ ++   N+LT  
Sbjct: 389 GTSGIVGGASSGVDPHLVSSSKALDYSEKKVTAIPDELWAVAQSGGVTIVNFSKNQLTQY 448

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
              + +    L EL  S N L  +  +IG LSRL+ LDL  N++LS+P+ +S   SL E 
Sbjct: 449 PKQIESLKDSLCELNLSFNKLTTIDASIGCLSRLVMLDLGGNQLLSLPAELSNASSLREL 508

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPE 293
            +  N  +++P+ +  L  L  +   SNQ+ E   +  +   +L+ LDL NN +  +PPE
Sbjct: 509 VISFNRFTSIPSVVYSLPCLEIILAGSNQIAEIDAQGLKSLAQLATLDLQNNDIRQVPPE 568

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +G +T LR L L GN +R  R ++++  T A+L+YLR R+P
Sbjct: 569 LGLVTQLRSLQLEGNAIRQPRPAILSKGTLAILEYLRGRIP 609



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 175/396 (44%), Gaps = 54/396 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L   HN +  L +DL +L  L  L + HN+L+ LP+ +     LK L +  N+I  +
Sbjct: 224 LRTLDATHNQLHTLPDDLGHLNKLEQLYLRHNRLTHLPS-LQHCTALKELHLGNNAIQGL 282

Query: 107 PDE-IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            +E +    ++   D   N+L ++PS +     L     +NN I++LP +L     +  +
Sbjct: 283 SEEQLREMHSVSVLDLRDNRLTKVPSEIVLLQMLERLDLTNNNISALPYELGTLPNLKSI 342

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET------------------IGSLS 207
            ++GN L  +  ++I   T   EL   K L + M E+                  +G  S
Sbjct: 343 VLDGNPLKSIRRDIIMRGT--NEL--KKYLRSRMAESAPTAPQSAVQSSKGTSGIVGGAS 398

Query: 208 RLI---------RLDLHQNRILSIPSSI-----SGCCSLAEFYMGNNALSALPAELGKLS 253
             +          LD  + ++ +IP  +     SG  ++  F    N L+  P ++  L 
Sbjct: 399 SGVDPHLVSSSKALDYSEKKVTAIPDELWAVAQSGGVTIVNF--SKNQLTQYPKQIESLK 456

Query: 254 -KLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L  N+L        C  RL +LDL  N L  LP E+   ++LR+L+++ N   
Sbjct: 457 DSLCELNLSFNKLTTIDASIGCLSRLVMLDLGGNQLLSLPAELSNASSLRELVISFNRFT 516

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           ++ S + + P   ++    +++ E +    +   + L  +AT        L L+  ++  
Sbjct: 517 SIPSVVYSLPCLEIILAGSNQIAEID----AQGLKSLAQLAT--------LDLQNNDIRQ 564

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +P E+    ++  L L  N+I++  P + S  +L +
Sbjct: 565 VPPELGLVTQLRSLQLEGNAIRQPRPAILSKGTLAI 600


>gi|71896833|ref|NP_001026466.1| leucine-rich repeat-containing protein 40 [Gallus gallus]
 gi|82233906|sp|Q5ZLN0.1|LRC40_CHICK RecName: Full=Leucine-rich repeat-containing protein 40
 gi|53129131|emb|CAG31363.1| hypothetical protein RCJMB04_5h5 [Gallus gallus]
          Length = 603

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/420 (36%), Positives = 237/420 (56%), Gaps = 29/420 (6%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +++AAR SG LNL+ R L +VP  V++ N D   EA      G  D+WWE  DL KLILA
Sbjct: 31  LIRAARKSGQLNLAGRGLGEVPQHVWRINLDTPEEAHQNLSFGAADRWWEQTDLTKLILA 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N +  L ED+R LP LTVL+V  N+L+ LP+A+G+L  L+ LDVS N +  IP+E+   
Sbjct: 91  SNQLRCLSEDVRLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIPEELLQL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           + L       N+L  LP   G+ ++L +   SNN +T +P+  A    + +L++  N+L 
Sbjct: 151 SHLKGLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPKSFALLINLVRLNLACNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L  + I++   L +L  +KN L  +P  + S++ L +L L +N++ S+P  +  C  L 
Sbjct: 211 DLPAD-ISAMKSLRQLDCTKNYLESVPSELASMASLEQLYLRKNKLRSLP-ELPSCKLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
           E + G N +  L AE L  L+ L  L+L  N++K    E   L +L  LDL+NN +S LP
Sbjct: 269 ELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G ++ L+ L L GNPLRT+R  L+   T  LLKYLRSR+   +D +AS  +E  +T 
Sbjct: 329 YTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSRI---QDDKASPNEEPPVTA 385

Query: 352 AT-----RLSV----TSKELSLEGMNLSAIPSEIWEA---GEITKLDLSRNSIQELPPEL 399
            T     R+++    T K L      ++ IP +++ A     +T ++ S+N +  +PP +
Sbjct: 386 MTLPSESRINMHAITTLKLLDYSEKQVAVIPDDVFSAVRSNPVTSVNFSKNQLTAIPPRI 445



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 160/336 (47%), Gaps = 48/336 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L    N IE L  E+L++L  L+VL +  NK+  +P  I  L  L+ LD++ N I +
Sbjct: 267 LKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISR 326

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRC----------LNLSDFKASNN-----CIT 150
           +P  +G+ + L       N L+ +   L +             + D KAS N        
Sbjct: 327 LPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSRIQDDKASPNEEPPVTAM 386

Query: 151 SLPED----LADCSKMSKLDVEGNKLTVLSNNLIASW--TMLTELIASKNLLNGMPETIG 204
           +LP +    +   + +  LD    ++ V+ +++ ++     +T +  SKN L  +P  I 
Sbjct: 387 TLPSESRINMHAITTLKLLDYSEKQVAVIPDDVFSAVRSNPVTSVNFSKNQLTAIPPRIV 446

Query: 205 SLSRLI-RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
            L   +  ++   N+I S+   +     L    + NN L++LP E+  L++L  ++L  N
Sbjct: 447 ELKDSVCDVNFGFNKISSVSLELCTLHKLTHLDIRNNVLTSLPEEMEALTRLQVINLSFN 506

Query: 264 QLKEY---------------------CVEACQLR----LSVLDLSNNSLSGLPPEIGKMT 298
           + K +                      ++  QL+    L  LDL NN L  +PPE+G   
Sbjct: 507 RFKVFPSVLYRMLALETILLSNNQVGSIDPLQLKKMEQLGTLDLQNNDLLQVPPELGNCE 566

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           TLR LLL GNP RT R++++   T A+L+YLRSR+P
Sbjct: 567 TLRTLLLEGNPFRTPRAAILAKGTAAVLEYLRSRIP 602



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 102/473 (21%), Positives = 191/473 (40%), Gaps = 116/473 (24%)

Query: 14  LNLSNRSLRDVPNEVYK---------NFDEAGE-GDKWWEAVDLQKLILAHNNIEKLKED 63
           L++S+  L+ +P E+ +           +E     D + + V L++L L++N++  + + 
Sbjct: 133 LDVSHNKLKSIPEELLQLSHLKGLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPKS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
              L  L  LN++ N+L +LPA I  +  L+ LD + N +  +P E+ S  +L +     
Sbjct: 193 FALLINLVRLNLACNQLKDLPADISAMKSLRQLDCTKNYLESVPSELASMASLEQLYLRK 252

Query: 124 NQLKELPSSLGRCLNLSDFKA--------------------------------------- 144
           N+L+ LP  L  C  L +  A                                       
Sbjct: 253 NKLRSLPE-LPSCKLLKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLL 311

Query: 145 --------SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT------MLTELI 190
                   +NN I+ LP  L + S++  L +EGN L  +  +L+   T      + + + 
Sbjct: 312 QKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSRIQ 371

Query: 191 ASKNLLNGMPE----TIGSLSR--------LIRLDLHQNRILSIPSSISGCCS---LAEF 235
             K   N  P     T+ S SR        L  LD  + ++  IP  +        +   
Sbjct: 372 DDKASPNEEPPVTAMTLPSESRINMHAITTLKLLDYSEKQVAVIPDDVFSAVRSNPVTSV 431

Query: 236 YMGNNALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
               N L+A+P  + +L   +  ++   N++    +E C L +L+ LD+ NN L+ LP E
Sbjct: 432 NFSKNQLTAIPPRIVELKDSVCDVNFGFNKISSVSLELCTLHKLTHLDIRNNVLTSLPEE 491

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           +  +T L+ + L+ N  +   S L                              ++ + T
Sbjct: 492 MEALTRLQVINLSFNRFKVFPSVLYR----------------------------MLALET 523

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            L   ++  S++       P ++ +  ++  LDL  N + ++PPEL +C +L+
Sbjct: 524 ILLSNNQVGSID-------PLQLKKMEQLGTLDLQNNDLLQVPPELGNCETLR 569



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 60/224 (26%)

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
           T LT+LI + N L  + E +  L  L  LD+H N++ S+PS+                  
Sbjct: 82  TDLTKLILASNQLRCLSEDVRLLPALTVLDVHDNQLTSLPSA------------------ 123

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 302
                LG+L  L  LD+  N+LK    E  QL  L  L L +N LS LP   G++ +L +
Sbjct: 124 -----LGQLENLQKLDVSHNKLKSIPEELLQLSHLKGLLLQHNELSHLPDGFGQLVSLEE 178

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L+ N L  +  S                               L+    RL++   +L
Sbjct: 179 LDLSNNHLTDIPKSFA-----------------------------LLINLVRLNLACNQL 209

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                    +P++I     + +LD ++N ++ +P EL+S ASL+
Sbjct: 210 K-------DLPADISAMKSLRQLDCTKNYLESVPSELASMASLE 246


>gi|224058509|ref|XP_002188403.1| PREDICTED: leucine-rich repeat-containing protein 40 [Taeniopygia
           guttata]
          Length = 605

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 160/442 (36%), Positives = 241/442 (54%), Gaps = 30/442 (6%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +L+ AR SG LNL+ R L  VP  V++ N D   EA      G  D+WWE  DL KLILA
Sbjct: 33  VLRLARRSGQLNLAGRGLTHVPEHVWRINLDTPEEAQQNLSFGAADRWWEQTDLTKLILA 92

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L ED++ LP LTVL+V  N+L+ LP+A+G+L  L+ LDVS N +  +P+E+   
Sbjct: 93  SNKLQSLSEDVQLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLRSLPEELLQL 152

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L +LP  LG+ L+L +   SNN +T++P   A    + +L++  N+L 
Sbjct: 153 PHLRSLLVQHNELSQLPEGLGQLLSLEELDVSNNQLTAIPTSFALLVNLVRLNLACNQLK 212

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L  +L A  + L +L  +KN L  +P  + +++ L +L L +N++ S+P  +  C  L 
Sbjct: 213 ELPADLSAMKS-LRQLDCTKNYLETVPPKLATMASLEQLYLRKNKLRSLP-ELPSCKLLK 270

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
           E + G N +  L AE L +LS L  L+L  N++K    E   L +L  LDL+NN +S LP
Sbjct: 271 ELHAGENQIEILNAENLKQLSSLCVLELRDNKIKAVPEEITVLQKLERLDLANNDISRLP 330

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G ++ L+ L L GNPLRT+R  L+   T  LLKYLRS++   +D     ++E  +T 
Sbjct: 331 YTLGNLSQLKFLALEGNPLRTVRRDLLQKGTQELLKYLRSKI---QDDGPGPSEEPPVTA 387

Query: 352 ATRLS---------VTSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELPPEL 399
            T  S          T K L       + IP  +++   A  +  ++ S+N ++E+PP L
Sbjct: 388 MTLPSQSKVNIHAITTLKLLEYSDKQAAEIPEAVFDAVGANPVATVNFSKNQLREIPPRL 447

Query: 400 SSCASLQVKFSDLVTNKESCIS 421
                     S L  NK SCIS
Sbjct: 448 VELKDSVCDVS-LGFNKISCIS 468



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 143/313 (45%), Gaps = 49/313 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI---GELHMLKSLDVSFN-- 101
           L++L LA+N+I +L   L NL  L  L +  N L  +   +   G   +LK L       
Sbjct: 316 LERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRTVRRDLLQKGTQELLKYLRSKIQDD 375

Query: 102 ----------SIMKIPDE----IGSATALVKFDCSSNQLKELPSSLGRCLN---LSDFKA 144
                     + M +P +    I + T L   + S  Q  E+P ++   +    ++    
Sbjct: 376 GPGPSEEPPVTAMTLPSQSKVNIHAITTLKLLEYSDKQAAEIPEAVFDAVGANPVATVNF 435

Query: 145 SNNCITSLPEDLADCSKMSKLDVE--GNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           S N +  +P  L +  K S  DV    NK++ +S+ L      LT L    N+L  +PE 
Sbjct: 436 SKNQLREIPPRLVEL-KDSVCDVSLGFNKISCISSGLCL-LQKLTHLDLRNNVLTALPEE 493

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLH 261
           + +L RL  ++L  NR    PS +    +L    + NN + ++ P +L  L KLGTLDL 
Sbjct: 494 MEALKRLHTINLAFNRFKVFPSVLYRLPALETILLSNNQVGSIDPVQLKGLDKLGTLDLQ 553

Query: 262 SNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
                                 NN L  +PPE+G    LR LLL GNP RT R++++   
Sbjct: 554 ----------------------NNDLLQVPPELGNCENLRSLLLEGNPFRTPRAAVLAKG 591

Query: 322 TPALLKYLRSRLP 334
           T A+L+YLRSR+P
Sbjct: 592 TAAVLEYLRSRIP 604


>gi|148230653|ref|NP_001085672.1| leucine-rich repeat-containing protein 40 [Xenopus laevis]
 gi|82236544|sp|Q6GPJ5.1|LRC40_XENLA RecName: Full=Leucine-rich repeat-containing protein 40
 gi|49257387|gb|AAH73124.1| MGC84527 protein [Xenopus laevis]
          Length = 605

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/416 (35%), Positives = 221/416 (53%), Gaps = 25/416 (6%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---------EAGEGDKWWEAVDLQKLILA 53
           ++KAAR SG LNLS R L +VP  V++ N D         + G  D+WWE  DL KLILA
Sbjct: 31  LIKAARKSGQLNLSARGLTEVPVSVWRINVDTPPEAHQNVDFGGSDRWWEQTDLTKLILA 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L ED+  LP L VL++  N+++ LP AI EL  L+ L++S N I ++P+E+   
Sbjct: 91  SNKLQALSEDISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHNKIKQLPNELQHL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L  F    NQL+ELP S+G    L +   SNNC+ S+   +   + + K ++  NKLT
Sbjct: 151 QNLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTGLVKFNLSSNKLT 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L +L  + NLL  +P ++  +  L +L L QN++  +P  +     L 
Sbjct: 211 ALPTE-IGKMKNLRQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLP-ELPFLTKLK 268

Query: 234 EFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++GNN +  L P  L  LS L  L+L  N+LK    E   L+ L  LDLSNN +  LP
Sbjct: 269 ELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPKEISLLKGLERLDLSNNDIGSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL--PENEDSEASTTKEDLI 349
             +G +  L+ L L GNPLR +R  ++N  T  LLKYL+ R+  P+    EA+   +  +
Sbjct: 329 DTLGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLKYLKGRVQTPDMTTQEAANPPDTAM 388

Query: 350 TMAT------RLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELP 396
           T+ +         +T K L       S IP  ++ A     IT ++ S+N + E+P
Sbjct: 389 TLPSDSVINAHAIMTLKTLEYCEKQASLIPEAVFNAAASSPITTVNFSKNQLTEVP 444



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 162/345 (46%), Gaps = 64/345 (18%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L + +N I+ L  E L+NL  L+VL + +NKL  LP  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPKEISLLKGLERLDLSNNDIGS 326

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSL-------------GRCL--NLSDFKASN--NC 148
           +PD +GS   L       N L+ +   +             GR    +++  +A+N  + 
Sbjct: 327 LPDTLGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLKYLKGRVQTPDMTTQEAANPPDT 386

Query: 149 ITSLPED-------------LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             +LP D             L  C K + L  E     V +    A+ + +T +  SKN 
Sbjct: 387 AMTLPSDSVINAHAIMTLKTLEYCEKQASLIPEA----VFN---AAASSPITTVNFSKNQ 439

Query: 196 LNGMPETIGSLS-RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P  I  +   +  ++L  N+I SI  ++     L    M NNAL++LP E+  L++
Sbjct: 440 LTEVPARIVEMKDSVYDVNLGFNKISSISLNLCMLLKLTHLDMRNNALASLPPEMEALTR 499

Query: 255 LGTLDLHSNQLKEY---------------------CVEACQLR----LSVLDLSNNSLSG 289
           L ++ L  N+ K +                      ++  QL+    LS LDL NN L  
Sbjct: 500 LQSIILSFNRFKHFPDVLYTIPNLETILISSNQIGSIDPIQLKKMTKLSTLDLQNNDLLQ 559

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +PP +G   +LR L L GNP R  R++++   T A+L+YLRSR+P
Sbjct: 560 IPPALGNCESLRALHLEGNPFRNPRATILAKGTVAILEYLRSRIP 604



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 150/335 (44%), Gaps = 38/335 (11%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S   L+E+P ++  +++    +   N      D     T L K   +SN+L+ L   
Sbjct: 41  LNLSARGLTEVPVSVWRINVDTPPEAHQNVDFGGSDRWWEQTDLTKLILASNKLQALSED 100

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +     L      +N I SLP  + + + + KL++  NK+  L N L      L   +  
Sbjct: 101 ISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHNKIKQLPNEL-QHLQNLKSFLLQ 159

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P++IG LS L  LD+  N + S+ SS+     L +F + +N L+ALP E+GK+
Sbjct: 160 HNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTGLVKFNLSSNKLTALPTEIGKM 219

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  LD  SN L+        +  L  L L  N L+ LP E+  +T L++L +  N ++
Sbjct: 220 KNLRQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLP-ELPFLTKLKELHVGNNQIQ 278

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL      GP                        E L  +++ LSV    L L    L  
Sbjct: 279 TL------GP------------------------EHLQNLSS-LSV----LELRYNKLKV 303

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +P EI     + +LDLS N I  LP  L S  +L+
Sbjct: 304 LPKEISLLKGLERLDLSNNDIGSLPDTLGSLPNLK 338


>gi|449268295|gb|EMC79165.1| Leucine-rich repeat-containing protein 40 [Columba livia]
          Length = 559

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/391 (37%), Positives = 215/391 (54%), Gaps = 21/391 (5%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           D P E Y+N    G  D+WWE  DL KLILA N ++ L ED++ L  LTVL+V  N+L+ 
Sbjct: 18  DTPEEAYQNLS-FGAADRWWEQTDLTKLILASNKLQSLSEDVKLLAALTVLDVHDNQLTS 76

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP+A+G+L  L+ LDVS N +  IP+E+     L       N+L  LP+  G+ +NL + 
Sbjct: 77  LPSALGQLENLQKLDVSHNKLRSIPEELTQLPHLKSLLLHHNELTHLPAGFGQLVNLEEL 136

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN +T +P   A    + +L++ GNKL  L  + I++   L +L  SKN L  +P  
Sbjct: 137 DLSNNHLTDIPTSFALLINLVRLNLAGNKLESLPAD-ISAMKSLRQLDCSKNYLETVPSK 195

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLH 261
           I +++ L +L L +N++ S+P   S C  L E + G N +  L AE L +L+ L  L+L 
Sbjct: 196 IATMASLEQLYLRKNKLRSLP-EFSSCKLLKELHAGENQIETLNAENLKQLNSLSVLELR 254

Query: 262 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N++K    E   L +L  LDL+NN +S LP  +G ++ L+ L L GNPLRT+R  L+  
Sbjct: 255 DNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRTIRRDLLQK 314

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--------VTS-KELSLEGMNLSA 371
            T  LLKYLRS++      E S T E  +T  T  S        +TS K L       + 
Sbjct: 315 GTQELLKYLRSKI----QDEPSPTGEPPVTAMTLPSESRVNMHAITSLKLLEYSEKQAAV 370

Query: 372 IPSEIWEA---GEITKLDLSRNSIQELPPEL 399
           IP E+++A     +   + S+N + E+PP +
Sbjct: 371 IPDEMFDAVRSHPVATANFSKNQLSEVPPRI 401



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 157/337 (46%), Gaps = 51/337 (15%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L    N IE L  E+L+ L  L+VL +  NK+  +P  I  L  L+ LD++ N I +
Sbjct: 224 LKELHAGENQIETLNAENLKQLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISR 283

Query: 106 IPDEIGSATALVKFDCSSNQLKEL-----------------------PSSLGR----CLN 138
           +P  +G+ + L       N L+ +                       PS  G      + 
Sbjct: 284 LPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSKIQDEPSPTGEPPVTAMT 343

Query: 139 L-SDFKASNNCITSL-------------PEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           L S+ + + + ITSL             P+++ D  +   ++  +   N+L+ +   ++ 
Sbjct: 344 LPSESRVNMHAITSLKLLEYSEKQAAVIPDEMFDAVRSHPVATANFSKNQLSEVPPRIVE 403

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               + ++    N ++ +   +  L +L  LD+  N + S+P  +     L    +  N 
Sbjct: 404 LKDSVCDVNLGFNRISSISLELCVLHKLTHLDIRNNFLTSLPEEMEALARLQIINLSFNR 463

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDLSNNSLSGLPPEIGKM 297
               P+ L ++  L T+ L +NQ+    ++  QL+    L  LDL NN L  +PPE+G  
Sbjct: 464 FKVFPSVLYRMGALETILLSNNQVG--SIDPLQLKNMDKLGTLDLQNNDLLQVPPELGNC 521

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            TLR LLL GNP RT R++++   T A+L+YLRSR+P
Sbjct: 522 ETLRTLLLEGNPFRTPRAAILAKGTAAVLEYLRSRIP 558



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 131/273 (47%), Gaps = 17/273 (6%)

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           +L+    ++N + SL ED+   + ++ LDV  N+LT L + L      L +L  S N L 
Sbjct: 40  DLTKLILASNKLQSLSEDVKLLAALTVLDVHDNQLTSLPSAL-GQLENLQKLDVSHNKLR 98

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +PE +  L  L  L LH N +  +P+      +L E  + NN L+ +P     L  L  
Sbjct: 99  SIPEELTQLPHLKSLLLHHNELTHLPAGFGQLVNLEELDLSNNHLTDIPTSFALLINLVR 158

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L  N+L+    +   ++ L  LD S N L  +P +I  M +L +L L  N LR    S
Sbjct: 159 LNLAGNKLESLPADISAMKSLRQLDCSKNYLETVPSKIATMASLEQLYLRKNKLR----S 214

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           L    +  LLK L +     E+   +   E+L  + + LSV    L L    + ++P EI
Sbjct: 215 LPEFSSCKLLKELHA----GENQIETLNAENLKQLNS-LSV----LELRDNKIKSVPDEI 265

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
               ++ +LDL+ N I  LP  L + +  Q+KF
Sbjct: 266 TLLQKLERLDLANNDISRLPYTLGNLS--QLKF 296



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 104/476 (21%), Positives = 184/476 (38%), Gaps = 123/476 (25%)

Query: 14  LNLSNRSLRDVPNEVYK---------NFDE-----AGEGDKWWEAVDLQKLILAHNNIEK 59
           L++S+  LR +P E+ +         + +E     AG G    + V+L++L L++N++  
Sbjct: 90  LDVSHNKLRSIPEELTQLPHLKSLLLHHNELTHLPAGFG----QLVNLEELDLSNNHLTD 145

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           +      L  L  LN++ NKL  LPA I  +  L+ LD S N +  +P +I +  +L + 
Sbjct: 146 IPTSFALLINLVRLNLAGNKLESLPADISAMKSLRQLDCSKNYLETVPSKIATMASLEQL 205

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKA----------------------------------- 144
               N+L+ LP     C  L +  A                                   
Sbjct: 206 YLRKNKLRSLPE-FSSCKLLKELHAGENQIETLNAENLKQLNSLSVLELRDNKIKSVPDE 264

Query: 145 ------------SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
                       +NN I+ LP  L + S++  L +EGN L  +  +L+   T  L + + 
Sbjct: 265 ITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLR 324

Query: 192 SK-----NLLNGMPETIGSLSRLIRLDLH-----------QNRILSIPSSISGCCS---L 232
           SK     +     P T  +L    R+++H           + +   IP  +        +
Sbjct: 325 SKIQDEPSPTGEPPVTAMTLPSESRVNMHAITSLKLLEYSEKQAAVIPDEMFDAVRSHPV 384

Query: 233 AEFYMGNNALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           A      N LS +P  + +L   +  ++L  N++    +E C L +L+ LD+ NN L+ L
Sbjct: 385 ATANFSKNQLSEVPPRIVELKDSVCDVNLGFNRISSISLELCVLHKLTHLDIRNNFLTSL 444

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P E+  +  L+ + L+ N  +   S L                                 
Sbjct: 445 PEEMEALARLQIINLSFNRFKVFPSVLY-------------------------------- 472

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              R+      L       S  P ++    ++  LDL  N + ++PPEL +C +L+
Sbjct: 473 ---RMGALETILLSNNQVGSIDPLQLKNMDKLGTLDLQNNDLLQVPPELGNCETLR 525


>gi|301780906|ref|XP_002925869.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Ailuropoda melanoleuca]
 gi|281346252|gb|EFB21836.1| hypothetical protein PANDA_015445 [Ailuropoda melanoleuca]
          Length = 603

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 158/439 (35%), Positives = 242/439 (55%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 32  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 91

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 92  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLQILPEEITNL 151

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P    +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 152 RNLKGLYLQHNELTCIPEGFEQLFNLEDLDISNNRLTTVPASFSSLSSLVRLNLSSNQLK 211

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L  + NLL  +P  + ++  L  L L +N++  +P     C  L 
Sbjct: 212 SLPAE-ISGMKRLKHLDCNSNLLEAVPPELANMESLELLYLRRNKLRFLP-EFPSCRLLK 269

Query: 234 EFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E Y+G N +  L P  L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 270 ELYVGENQIEILGPEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 329

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +GK+  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S + +     +T+
Sbjct: 330 CSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSPSDSVIGTAMTL 388

Query: 352 A--TRLSV----TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
              +R++V    T K L   G   + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 389 PSESRVNVHAIITLKILDYSGKQTTLIPDEVFDAVKGNIITSVNFSKNQLCEIPKRIVEL 448

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   +L  NK S IS
Sbjct: 449 KEM-VSDVNLSFNKLSFIS 466



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 149/309 (48%), Gaps = 29/309 (9%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ + +++  L  L  L++S+N +S LP ++G+LH LK L +  N +  I  EI 
Sbjct: 297 LRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKLH-LKFLALEGNPLRTIRREII 355

Query: 111 --GSATAL------VKFDCSS------NQLKELPS----SLGRCLNLSDFKASNNCITSL 152
             G+   L      +K D  S           LPS    ++   + L     S    T +
Sbjct: 356 NKGTQEVLKYLRSKIKDDGPSPSDSVIGTAMTLPSESRVNVHAIITLKILDYSGKQTTLI 415

Query: 153 PEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+++ D  K   ++ ++   N+L  +   ++    M++++  S N L+ +   +  L +L
Sbjct: 416 PDEVFDAVKGNIITSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCMLQKL 475

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
             LDL  N + S+P  +     L    +  N    LP  L  +  L T+ + +NQ+    
Sbjct: 476 TFLDLRNNFLNSLPEEMESLIKLQTINLSFNRFKILPEVLYHIPTLETILISNNQVG--S 533

Query: 270 VEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           V+  +++    L  LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+
Sbjct: 534 VDPQKMKAMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAI 593

Query: 326 LKYLRSRLP 334
           L+YLR R+P
Sbjct: 594 LEYLRDRIP 602



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 172/427 (40%), Gaps = 84/427 (19%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L+ +P E+         G K  + +D        N +E +  +L N+  L +L
Sbjct: 203 LNLSSNQLKSLPAEI--------SGMKRLKHLDCNS-----NLLEAVPPELANMESLELL 249

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-PDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I  + P+ +    +++  D   N+LK +P  
Sbjct: 250 YLRRNKLRFLPE-FPSCRLLKELYVGENQIEILGPEHLKHLNSILVLDLRDNKLKSVPDE 308

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
           +    +L     SNN I+SLP  L     +  L +EGN L  +   +I   T  + + + 
Sbjct: 309 ITLLQSLERLDLSNNDISSLPCSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLR 367

Query: 192 SK---------NLLNGMPETIGSLSR--------LIRLDLHQNRILSIPSSISGCCS--- 231
           SK         + + G   T+ S SR        L  LD    +   IP  +        
Sbjct: 368 SKIKDDGPSPSDSVIGTAMTLPSESRVNVHAIITLKILDYSGKQTTLIPDEVFDAVKGNI 427

Query: 232 LAEFYMGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N L  +P  + +L ++   ++L  N+L    +E C L +L+ LDL NN L+ 
Sbjct: 428 ITSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNS 487

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE-----DSEASTT 344
           LP E+  +  L+ + L+ N  + L   L + PT      L + L  N      D +    
Sbjct: 488 LPEEMESLIKLQTINLSFNRFKILPEVLYHIPT------LETILISNNQVGSVDPQKMKA 541

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
            E+LIT                                  LDL  N + ++PPEL +C +
Sbjct: 542 MENLIT----------------------------------LDLQNNDLLQIPPELGNCVN 567

Query: 405 LQVKFSD 411
           L+    D
Sbjct: 568 LRTLLLD 574


>gi|156404169|ref|XP_001640280.1| predicted protein [Nematostella vectensis]
 gi|156227413|gb|EDO48217.1| predicted protein [Nematostella vectensis]
          Length = 602

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 149/428 (34%), Positives = 227/428 (53%), Gaps = 28/428 (6%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEAGEG--------DKWWEAVDLQKLIL 52
           D +LK  R SG LNLSNR L +VP +V++ N D   E         D+WW+ VDL KLIL
Sbjct: 25  DAVLKQGRKSGQLNLSNRGLTEVPEKVWRINLDVPEEAKSVSLDCEDRWWDQVDLTKLIL 84

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           A N++ ++  D+ NLP L +L++  N L+ LP  IG L  L+ L++  N I  +P  +  
Sbjct: 85  ASNSLTEISGDVFNLPALVLLDIHDNSLTTLPEEIGSLSCLQKLNLGHNKISSLPMSMAQ 144

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
             +L       N  K L   LG   NL +   S N ++SLP  LA    +  L++  N L
Sbjct: 145 LESLCSLKLEHNSFKSLECWLGSLRNLEELDVSYNMVSSLPS-LAGLKHLRTLNLSNNAL 203

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
            +L          L +L  S N +   P  + ++  L RLD  QN + S+P S+  C SL
Sbjct: 204 EMLPPEF-DHLQALDDLNISSNKICNFPGKLYNMKSLRRLDCRQNHLTSVP-SVGQCPSL 261

Query: 233 AEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
            E Y+  N ++ L ++     S L  LDLH N L     +   LR L  LDL+NN +SGL
Sbjct: 262 KELYLAYNKIAELDSKVFAGYSGLTVLDLHDNLLTSIPEDIIILRDLERLDLTNNDISGL 321

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS----EASTTKE 346
           P +IG M+ L+ L+L GNPLR LR  +V   T A++K+L+SR+P+++ +    +AS    
Sbjct: 322 PYKIGNMSNLKSLVLNGNPLRELRRDIVMRGTQAIMKHLKSRIPDDDGATDQPDASVAPL 381

Query: 347 DLITMATRLSVT-------SKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQELP 396
             ++M +  +V        +K L+  G   ++IP E+ EA    E+  +D S+N + +LP
Sbjct: 382 PSVSMGSSGAVVDMHTLGHTKTLNYSGKKSASIPVEVLEAAVTSEVKTVDFSKNMLTDLP 441

Query: 397 PELSSCAS 404
             +++ +S
Sbjct: 442 ERITALSS 449



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 171/349 (48%), Gaps = 49/349 (14%)

Query: 27  EVYKNFDEAGEGD-KWWEAVDLQKLILAHNNI-EKLKEDLRNLPLLTVLNVSHNKLSELP 84
           E+Y  +++  E D K +       ++  H+N+   + ED+  L  L  L++++N +S LP
Sbjct: 263 ELYLAYNKIAELDSKVFAGYSGLTVLDLHDNLLTSIPEDIIILRDLERLDLTNNDISGLP 322

Query: 85  AAIGELHMLKSLDVSFN---------------SIMK-----IPDEIGSATALVKFDCSSN 124
             IG +  LKSL ++ N               +IMK     IPD+ G+       D    
Sbjct: 323 YKIGNMSNLKSLVLNGNPLRELRRDIVMRGTQAIMKHLKSRIPDDDGAT------DQPDA 376

Query: 125 QLKELPS-SLG--------------RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
            +  LPS S+G              + LN S  K+++  +  L  + A  S++  +D   
Sbjct: 377 SVAPLPSVSMGSSGAVVDMHTLGHTKTLNYSGKKSASIPVEVL--EAAVTSEVKTVDFSK 434

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N LT L   + A  + +++L    N +  +P  I S ++L  LDL  N++ S+P   +  
Sbjct: 435 NMLTDLPERITALSSSVSDLNLGFNKITSLPSGICSFTQLEFLDLRNNQLSSLPDGFASL 494

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL---DLSNNS 286
            SL E  +  N  S LP  L  ++ L TL    NQ+    V+   LR+SVL   DL NN+
Sbjct: 495 RSLREIIISYNRFSCLPPVLYSMTSLRTLLACDNQIAVIDVDGL-LRMSVLETLDLQNNN 553

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           +S +PPE+G +  L+ L L GNP RT R++++   T ALL+YLR R+P 
Sbjct: 554 ISQVPPELGNVRGLKALQLGGNPFRTPRAAILAKGTQALLEYLRDRIPR 602



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 178/434 (41%), Gaps = 85/434 (19%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK  RT   LNLSN +L  +P E    FD         +A+D   L ++ N I      L
Sbjct: 190 LKHLRT---LNLSNNALEMLPPE----FDH-------LQALD--DLNISSNKICNFPGKL 233

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA-TALVKFDCSS 123
            N+  L  L+   N L+ +P+ +G+   LK L +++N I ++  ++ +  + L   D   
Sbjct: 234 YNMKSLRRLDCRQNHLTSVPS-VGQCPSLKELYLAYNKIAELDSKVFAGYSGLTVLDLHD 292

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N L  +P  +    +L     +NN I+ LP  + + S +  L + GN L  L  +++   
Sbjct: 293 NLLTSIPEDIIILRDLERLDLTNNDISGLPYKIGNMSNLKSLVLNGNPLRELRRDIVMRG 352

Query: 184 TM-----LTELIASKNLLNGMPE---------TIGSLSRLIRLDLHQ-----------NR 218
           T      L   I   +     P+         ++GS   ++  D+H             +
Sbjct: 353 TQAIMKHLKSRIPDDDGATDQPDASVAPLPSVSMGSSGAVV--DMHTLGHTKTLNYSGKK 410

Query: 219 ILSIPSSISGCCSLAEFY---MGNNALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQ 274
             SIP  +      +E        N L+ LP  +  LS  +  L+L  N++       C 
Sbjct: 411 SASIPVEVLEAAVTSEVKTVDFSKNMLTDLPERITALSSSVSDLNLGFNKITSLPSGICS 470

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
             +L  LDL NN LS LP     + +LR+++++ N    L         P +L  +    
Sbjct: 471 FTQLEFLDLRNNQLSSLPDGFASLRSLREIIISYNRFSCL---------PPVLYSM---- 517

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
                    T+   L+    +++V    + ++G+   ++         +  LDL  N+I 
Sbjct: 518 ---------TSLRTLLACDNQIAV----IDVDGLLRMSV---------LETLDLQNNNIS 555

Query: 394 ELPPELSSCASLQV 407
           ++PPEL +   L+ 
Sbjct: 556 QVPPELGNVRGLKA 569


>gi|58332470|ref|NP_001011310.1| leucine-rich repeat-containing protein 40 [Xenopus (Silurana)
           tropicalis]
 gi|82232111|sp|Q5M8G4.1|LRC40_XENTR RecName: Full=Leucine-rich repeat-containing protein 40
 gi|56789102|gb|AAH88034.1| hypothetical LOC496765 [Xenopus (Silurana) tropicalis]
          Length = 605

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 153/416 (36%), Positives = 218/416 (52%), Gaps = 25/416 (6%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---------EAGEGDKWWEAVDLQKLILA 53
           ++KAAR SG LNLS R L DVP  V++ N D         + G  D+WWE  DL KLILA
Sbjct: 31  LIKAARKSGQLNLSARGLTDVPVSVWRINVDTPPEAHQNVDFGGSDRWWEQTDLTKLILA 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L ED+  LP L VL++  N++  LP AI EL  L+ L++S N I ++P E+   
Sbjct: 91  SNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       NQL+ELP S+G    L +   SNNC+ S+   +   + + K ++  NKLT
Sbjct: 151 QNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLT 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L +L  + NLL  +P ++  +  L +L L QN++  +P  +     L 
Sbjct: 211 ALPTE-IGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLP-ELPFLTKLK 268

Query: 234 EFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++GNN +  L P  L  LS L  L+L  N+LK    E   L  L  LDLSNN L  LP
Sbjct: 269 ELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR--LPE---NEDSEASTTKE 346
             +G +  L+ L L GNPLR +R  ++N  T  LLKYL+ R  +P+    ED  ++ T  
Sbjct: 329 CTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRVQVPDVKTQEDENSTATAM 388

Query: 347 DLIT---MATRLSVTSKELSLEGMNLSAIPSEIWEA---GEITKLDLSRNSIQELP 396
            L +   + T   VT K L       S IP  ++ A     IT ++ S+N + E+P
Sbjct: 389 TLPSESVVNTHAIVTLKTLEYCEKQASLIPEAVFNATGSSFITTVNFSKNQLTEVP 444



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 158/345 (45%), Gaps = 64/345 (18%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L + +N I+ L  E L+NL  L+VL + +NKL  LP  I  L+ L+ LD+S N +  
Sbjct: 267 LKELHVGNNQIQTLGPEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGS 326

Query: 106 IPDEIGSATALVKFDCSSNQLK------------ELPSSLGRCLNLSDFKA-----SNNC 148
           +P  +GS   L       N L+            EL   L   + + D K      S   
Sbjct: 327 LPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRVQVPDVKTQEDENSTAT 386

Query: 149 ITSLPED-------------LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             +LP +             L  C K + L  E      + N   +S+  +T +  SKN 
Sbjct: 387 AMTLPSESVVNTHAIVTLKTLEYCEKQASLIPEA-----VFNATGSSF--ITTVNFSKNQ 439

Query: 196 LNGMPETIGSLSRLI-RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P  I  +   +  ++L  N+I SI  ++     L    M NN L++LP+E+  +++
Sbjct: 440 LTEVPARIVEMKDSVCDVNLGFNKISSISLNLCMLLKLTHIDMRNNVLTSLPSEMEAMTR 499

Query: 255 LGTLDLHSNQLKEY---------------------CVEACQL----RLSVLDLSNNSLSG 289
           L ++ L  N+ K +                      ++  QL    +LS LDL NN L  
Sbjct: 500 LQSVILSFNRFKHFPDVLYRIPTLETILISSNQIGSIDPTQLIKMTKLSTLDLQNNDLLQ 559

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +PP +G   +LR L L GNP R  R++++   T A+L+YLRSR+P
Sbjct: 560 IPPALGNCESLRALHLEGNPFRNPRAAILAKGTVAVLEYLRSRIP 604



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 58/223 (26%)

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
           T LT+LI + N L  + E I  L  L+ LD+H N+I+S+P +I    +L +  + +N + 
Sbjct: 82  TDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIK 141

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
            LP EL  L  L +L L  NQL+E                      LP  IG ++ L +L
Sbjct: 142 QLPKELQHLQNLKSLLLQHNQLEE----------------------LPDSIGHLSILEEL 179

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            ++ N LR++ SS+  G    L+K+                                  +
Sbjct: 180 DVSNNCLRSISSSV--GQLTGLVKF----------------------------------N 203

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L    L+A+P+EI +   + +LD + N ++ +P  ++   SL+
Sbjct: 204 LSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLE 246


>gi|311259185|ref|XP_003127976.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Sus
           scrofa]
          Length = 602

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 157/439 (35%), Positives = 240/439 (54%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA +       ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFSATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P    +  NL D   SNN ++S+P   +  S + +L++  N+L 
Sbjct: 151 RNLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLSSIPASFSSLSSVVRLNISSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L  + NLL  +P  + S+  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-ISGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLRFLP-EFPSCKLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +GK+  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++    E  +T+
Sbjct: 329 CSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGLSQSDCVTETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKTLDYSDKQTALIPDEVFDAVKSNVITSVNFSKNQLCEIPKRIVEM 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   +L  NK S IS
Sbjct: 448 KEM-VSDVNLSFNKLSFIS 465



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 150/309 (48%), Gaps = 29/309 (9%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ + +++  L  L  L++S+N +S LP ++G+LH LK L +  N +  I  EI 
Sbjct: 296 LRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKLH-LKFLALEGNPLRTIRREII 354

Query: 111 -GSATALVKF-------------DCSSNQLKELPS----SLGRCLNLSDFKASNNCITSL 152
                 ++K+             DC +     LPS    ++   + L     S+     +
Sbjct: 355 NKGTQEVLKYLRSKIKDDGLSQSDCVTETAMTLPSESRVNIHAIITLKTLDYSDKQTALI 414

Query: 153 PEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+++ D  K   ++ ++   N+L  +   ++    M++++  S N L+ +   +  L +L
Sbjct: 415 PDEVFDAVKSNVITSVNFSKNQLCEIPKRIVEMKEMVSDVNLSFNKLSFISLELCMLQKL 474

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
             LDL  N + S+P  +     L    +  N    LP  L ++  L T+ + +NQ+    
Sbjct: 475 TFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKILPEVLYRIPTLETILISNNQVG--S 532

Query: 270 VEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           V+  +++    L  LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+
Sbjct: 533 VDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAI 592

Query: 326 LKYLRSRLP 334
           L+YLR R+P
Sbjct: 593 LEYLRDRIP 601



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 111/484 (22%), Positives = 185/484 (38%), Gaps = 129/484 (26%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDE---AGEGDKWWEAVDLQKLILAHNNIEKLK 61
           LN+S+  L+ +P E+         Y   +E     EG  + +  +L+ L L++N +  + 
Sbjct: 133 LNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEG--FEQLFNLEDLDLSNNRLSSIP 190

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL----- 116
               +L  +  LN+S N+L  LPA I  +  LK LD + N +  IP E+ S  +L     
Sbjct: 191 ASFSSLSSVVRLNISSNQLKSLPAEISGMKRLKHLDCNSNLLETIPPELASMESLELLYL 250

Query: 117 ----VKF-------------------------------------DCSSNQLKELPSSLGR 135
               ++F                                     D   N+LK +P  +  
Sbjct: 251 RRNKLRFLPEFPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITL 310

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKN 194
             +L     SNN I+SLP  L     +  L +EGN L  +   +I   T  + + + SK 
Sbjct: 311 LQSLERLDLSNNDISSLPCSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI 369

Query: 195 LLNGMPET-----------------IGSLSRLIRLDLHQNRILSIPSSISGCCS---LAE 234
             +G+ ++                 I ++  L  LD    +   IP  +        +  
Sbjct: 370 KDDGLSQSDCVTETAMTLPSESRVNIHAIITLKTLDYSDKQTALIPDEVFDAVKSNVITS 429

Query: 235 FYMGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 292
                N L  +P  + ++ ++   ++L  N+L    +E C L +L+ LDL NN L+ LP 
Sbjct: 430 VNFSKNQLCEIPKRIVEMKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPE 489

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE-----DSEASTTKED 347
           E+  +  L+ + L+ N  + L   L   PT      L + L  N      D +   T E+
Sbjct: 490 EMESLVRLQTINLSFNRFKILPEVLYRIPT------LETILISNNQVGSVDPQKMKTMEN 543

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           LIT                                  LDL  N + ++PPEL +C +L+ 
Sbjct: 544 LIT----------------------------------LDLQNNDLLQIPPELGNCVNLRT 569

Query: 408 KFSD 411
              D
Sbjct: 570 LLLD 573


>gi|390332547|ref|XP_797039.3| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Strongylocentrotus purpuratus]
          Length = 702

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/423 (34%), Positives = 228/423 (53%), Gaps = 19/423 (4%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVY----------KNFDEAGEGDKWWEAVDLQKLILA 53
           ILK AR+SG LNLSNRSL  VP  V+          KN     + ++WW+  +L KLILA
Sbjct: 35  ILKQARSSGQLNLSNRSLTTVPQSVWNINTDVPPESKNVSLDNQDERWWDQNELVKLILA 94

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N +E+L  D++ LP LTVL+V  NKL+ LP AIGEL  L+ L++S N + ++P E+   
Sbjct: 95  SNKLEQLSNDIQLLPALTVLDVHDNKLNSLPTAIGELRNLQRLNISHNCLTELPSELSQL 154

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L+      N++  L   LG   +L +   SNN ++ LPE +    K+  L+   N+L 
Sbjct: 155 HDLLFLHVQHNKISVLQDGLGELNHLENLDVSNNQLSELPESIGSLRKLRSLNASENQLE 214

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            +    I +   +  L  S N L  +P  +G +S L ++ +  NRI S+P   + C  L 
Sbjct: 215 FIPTT-IGNLKGVRMLELSSNRLPALPLEMGYMSALEQIHIKFNRITSLP-PFTKCKDLK 272

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
           E + GNN ++ L  E L  LS L  LDL  N++     E  Q+  L+  +++NN++S LP
Sbjct: 273 ELHAGNNNITELSVELLQSLSSLNVLDLRDNKISIIPEEMIQVTTLTRFNIANNNVSSLP 332

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEASTTKEDLIT 350
            ++G + +L+ +++ GNP+R +R  ++   T  L+KYLRSR+ E  ED+  S++  D  +
Sbjct: 333 YKLGNLRSLKAMVVDGNPMRGIRXXILQRGTVELMKYLRSRIEETPEDTPDSSSASDPSS 392

Query: 351 MATRL-SVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASLQ 406
           +  R  +V  K L         IP  +WE  +   +T ++ S+N + E+P        LQ
Sbjct: 393 VIGRTDAVAGKTLDYSNKKSGTIPVSLWEPAKESGVTAVNFSKNMLTEVPANKGEKEPLQ 452

Query: 407 VKF 409
            K+
Sbjct: 453 NKY 455



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 130/276 (47%), Gaps = 13/276 (4%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFN----SIMK-----IPDEIGSATALVKFD 120
           +T +N S N L+E+PA  GE   L++     N     +MK     I +            
Sbjct: 428 VTAVNFSKNMLTEVPANKGEKEPLQNKYFYHNRGTVELMKYLRSRIEETPEDTPDSSSAS 487

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
             S+ L    +  G+ L+ S+ K S     SL E  A  S ++ ++   N LT +  NLI
Sbjct: 488 DPSSILGRTDAVAGKTLDYSN-KKSGTIPVSLWEP-AKESGVTAVNFSKNMLTEVPANLI 545

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                  ++  S N +  +P  +  +  + RLDL  N + SIPS       + E  +  N
Sbjct: 546 LLHKTAVDVNLSVNKIPTLPTEMQMMVNITRLDLGSNGLSSIPSEFETMSMMRELVISYN 605

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMT 298
             S +P  +   + L TL  + NQ+ +  +   +   ++S LDL NN +  +PPE+G  T
Sbjct: 606 RFSKVPDVVFTWTNLETLLANGNQIGDIDLTGFKRLTKISTLDLQNNDIGEVPPELGTFT 665

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +LR LLL GN  R  R +++N  T ALL YLR R+P
Sbjct: 666 SLRSLLLAGNRFRNPRPAILNKGTVALLAYLRDRIP 701



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 130/267 (48%), Gaps = 16/267 (5%)

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           D +++ KL +  NKL  LSN+ I     LT L    N LN +P  IG L  L RL++  N
Sbjct: 84  DQNELVKLILASNKLEQLSND-IQLLPALTVLDVHDNKLNSLPTAIGELRNLQRLNISHN 142

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
            +  +PS +S    L   ++ +N +S L   LG+L+ L  LD+ +NQL E       LR 
Sbjct: 143 CLTELPSELSQLHDLLFLHVQHNKISVLQDGLGELNHLENLDVSNNQLSELPESIGSLRK 202

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL----LKYLR-S 331
           L  L+ S N L  +P  IG +  +R L L+ N L  L   L  G   AL    +K+ R +
Sbjct: 203 LRSLNASENQLEFIPTTIGNLKGVRMLELSSNRLPAL--PLEMGYMSALEQIHIKFNRIT 260

Query: 332 RLPE----NEDSEASTTKEDLITMATRL--SVTS-KELSLEGMNLSAIPSEIWEAGEITK 384
            LP      +  E      ++  ++  L  S++S   L L    +S IP E+ +   +T+
Sbjct: 261 SLPPFTKCKDLKELHAGNNNITELSVELLQSLSSLNVLDLRDNKISIIPEEMIQVTTLTR 320

Query: 385 LDLSRNSIQELPPELSSCASLQVKFSD 411
            +++ N++  LP +L +  SL+    D
Sbjct: 321 FNIANNNVSSLPYKLGNLRSLKAMVVD 347



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           AVD+    L+ N I  L  +++ +  +T L++  N LS +P+    + M++ L +S+N  
Sbjct: 551 AVDVN---LSVNKIPTLPTEMQMMVNITRLDLGSNGLSSIPSEFETMSMMRELVISYNRF 607

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELP-SSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
            K+PD + + T L     + NQ+ ++  +   R   +S     NN I  +P +L   + +
Sbjct: 608 SKVPDVVFTWTNLETLLANGNQIGDIDLTGFKRLTKISTLDLQNNDIGEVPPELGTFTSL 667

Query: 163 SKLDVEGNKL 172
             L + GN+ 
Sbjct: 668 RSLLLAGNRF 677


>gi|426215732|ref|XP_004002123.1| PREDICTED: leucine-rich repeat-containing protein 40 [Ovis aries]
          Length = 602

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 157/439 (35%), Positives = 243/439 (55%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA +       ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFNASERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P    +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVPASFSFLSSLVRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L   L +    L  L  + NLL  +P  + S+  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAEL-SGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLRFLP-EFPSCKLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEKLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G++  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S+  +  E  +T+
Sbjct: 329 CSLGRL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQNDSVTETAMTL 387

Query: 352 A--TRLSV----TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
              +R++V    T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNVHTILTLKMLDYSDKQTALIPDEVFDAVKSNIITSINFSKNQLCEIPKRIVEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   +L  NK S IS
Sbjct: 448 KEM-VSDVNLSYNKLSSIS 465



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 151/335 (45%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IEKL  E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEKLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISS 326

Query: 106 IPDEIG------------------------SATALVKF-------------DCSSNQLKE 128
           +P  +G                            ++K+             D  +     
Sbjct: 327 LPCSLGRLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQNDSVTETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   L L     S+     +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNVHTILTLKMLDYSDKQTALIPDEVFDAVKSNIITSINFSKNQLCEIPKRIVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   + +L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVNLSYNKLSSISLELCTLQKLTFLDLRNNFLNSLPEEMESLTRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  +    L  LDL NN L  +PPE+G    
Sbjct: 507 FKILPEVLYRIPTLETVLISNNQVGALDPQKMKTMENLITLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 174/427 (40%), Gaps = 84/427 (19%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L+ +P E+         G K  + +D        N +E +  +L ++  L +L
Sbjct: 202 LNLSSNQLKSLPAEL--------SGMKRLKHLDCNS-----NLLETIPPELASMESLELL 248

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-PDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I K+  + +    +++  D   N+LK +P  
Sbjct: 249 YLRRNKLRFLPE-FPSCKLLKELHVGENQIEKLGAEHLKHLNSILVLDLRDNKLKSVPDE 307

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
           +    +L     SNN I+SLP  L     +  L +EGN L  +   +I   T  + + + 
Sbjct: 308 ITLLQSLERLDLSNNDISSLPCSLGRL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLR 366

Query: 192 SKNLLNG------MPETIGSLSRLIRLDLHQNRILS-----------IPSSISGCCS--- 231
           SK   +G      + ET  +L    R+++H    L            IP  +        
Sbjct: 367 SKIKDDGPSQNDSVTETAMTLPSESRVNVHTILTLKMLDYSDKQTALIPDEVFDAVKSNI 426

Query: 232 LAEFYMGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N L  +P  + +L ++   ++L  N+L    +E C L +L+ LDL NN L+ 
Sbjct: 427 ITSINFSKNQLCEIPKRIVELKEMVSDVNLSYNKLSSISLELCTLQKLTFLDLRNNFLNS 486

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE-----DSEASTT 344
           LP E+  +T L+ + L+ N  + L   L   PT      L + L  N      D +   T
Sbjct: 487 LPEEMESLTRLQTINLSFNRFKILPEVLYRIPT------LETVLISNNQVGALDPQKMKT 540

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
            E+LIT                                  LDL  N + ++PPEL +C +
Sbjct: 541 MENLIT----------------------------------LDLQNNDLLQIPPELGNCVN 566

Query: 405 LQVKFSD 411
           L+    D
Sbjct: 567 LRTLLLD 573


>gi|126305957|ref|XP_001379454.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Monodelphis domestica]
          Length = 598

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 152/446 (34%), Positives = 236/446 (52%), Gaps = 26/446 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R L +VP  V++ N D   EA +       ++WWE  DL KLI++
Sbjct: 26  LLKAARKSGQLNLSGRELNEVPQMVWRINLDLPEEANQNHSFNSSERWWEQTDLTKLIIS 85

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LT+L++  N+L+ LP AIGEL  L+ L+VS N +  +P+E+   
Sbjct: 86  NNKLQSLSDDLRLLPALTILDMHDNQLTSLPCAIGELENLQKLNVSHNKLKMLPEELTKL 145

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P   G    L D   SNN +T++P   +  SK+ KL++  N++ 
Sbjct: 146 RNLKVLFLQYNELTCVPEGFGGLDKLEDLDLSNNRLTTVPASFSSLSKLMKLNLASNQMK 205

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + N L  +P  + ++  L  L L +N++  +P     C  L 
Sbjct: 206 NLPAE-ITRMKRLKHLDCTSNYLETIPSELANMESLELLYLRRNKLRFLP-EFPSCMLLK 263

Query: 234 EFYMGNNALSALPA-ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  + A  L  L  +  LDL  N+LK    E   L+ L  LDL+NN +  LP
Sbjct: 264 ELHIGENQIEEITAGHLKHLKSVHVLDLRDNKLKSIPDEITLLQALERLDLTNNDVRSLP 323

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  L+N  T  +LKYLRS++ ++  ++  +  E  +T+
Sbjct: 324 HILGTLPHLKFLALEGNPLRTIRRELLNKGTQEVLKYLRSKIKDDTPNQNDSCIETAMTL 383

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEA---GEITKLDLSRNSIQELPPELSSC 402
            ++  V      T K L       + IP E+++A     IT ++ ++N + E+P  +   
Sbjct: 384 PSQSRVNTHAMTTLKLLDYSDKKATLIPDEVFDAIGSNTITSINFTKNHLNEIPQRIVEL 443

Query: 403 ASLQVKFSDLVTNKESCISG--CYLY 426
            +  V   +L  NK SCIS   C L+
Sbjct: 444 KA-TVCDVNLGFNKLSCISAELCALH 468



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 159/338 (47%), Gaps = 52/338 (15%)

Query: 47  LQKLILAHNNIEKLKE-DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE++    L++L  + VL++  NKL  +P  I  L  L+ LD++ N +  
Sbjct: 262 LKELHIGENQIEEITAGHLKHLKSVHVLDLRDNKLKSIPDEITLLQALERLDLTNNDVRS 321

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSL---GRCLNLSDFKA---------SNNCI---T 150
           +P  +G+   L       N L+ +   L   G    L   ++         +++CI    
Sbjct: 322 LPHILGTLPHLKFLALEGNPLRTIRRELLNKGTQEVLKYLRSKIKDDTPNQNDSCIETAM 381

Query: 151 SLP-EDLADCSKMSKL---DVEGNKLTVLSNNLIASW--TMLTELIASKNLLNGMPETI- 203
           +LP +   +   M+ L   D    K T++ + +  +     +T +  +KN LN +P+ I 
Sbjct: 382 TLPSQSRVNTHAMTTLKLLDYSDKKATLIPDEVFDAIGSNTITSINFTKNHLNEIPQRIV 441

Query: 204 -----------------------GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                                   +L +LI LD+  N + S+P  +     L    +  N
Sbjct: 442 ELKATVCDVNLGFNKLSCISAELCALHKLIHLDIRNNLLTSLPEEMEALSRLQTINLSFN 501

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGK 296
            L A P  L +L  L T+ L +NQL    V+  +L    RL+ LDL NN L  +PPE+G 
Sbjct: 502 RLQAFPCVLYRLRTLETVLLGNNQLGS--VDPLRLQQMDRLATLDLQNNDLLHVPPELGN 559

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             +LR LLL GNP RT R++++   T A+L+YLR R+P
Sbjct: 560 CVSLRTLLLEGNPFRTPRAAILARGTDAVLEYLRGRIP 597



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 172/412 (41%), Gaps = 61/412 (14%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNL++  ++++P E+   K          + E +         L+ L L  N +  L E 
Sbjct: 197 LNLASNQMKNLPAEITRMKRLKHLDCTSNYLETIPSELANMESLELLYLRRNKLRFLPE- 255

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKS---LDVSFNSIMKIPDEIGSATALVKFD 120
             +  LL  L++  N++ E+ A  G L  LKS   LD+  N +  IPDEI    AL + D
Sbjct: 256 FPSCMLLKELHIGENQIEEITA--GHLKHLKSVHVLDLRDNKLKSIPDEITLLQALERLD 313

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            ++N ++ LP  LG   +L       N + ++  +L +      L    +K+   + N  
Sbjct: 314 LTNNDVRSLPHILGTLPHLKFLALEGNPLRTIRRELLNKGTQEVLKYLRSKIKDDTPNQN 373

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS---GCCSLAEFYM 237
            S       + S++ +N       +++ L  LD    +   IP  +    G  ++     
Sbjct: 374 DSCIETAMTLPSQSRVN-----THAMTTLKLLDYSDKKATLIPDEVFDAIGSNTITSINF 428

Query: 238 GNNALSALPAELGKL-SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
             N L+ +P  + +L + +  ++L  N+L     E C L +L  LD+ NN L+ LP E+ 
Sbjct: 429 TKNHLNEIPQRIVELKATVCDVNLGFNKLSCISAELCALHKLIHLDIRNNLLTSLPEEME 488

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
            ++ L+ + L+ N L+           P +L  LR             T E ++    +L
Sbjct: 489 ALSRLQTINLSFNRLQAF---------PCVLYRLR-------------TLETVLLGNNQL 526

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
                         S  P  + +   +  LDL  N +  +PPEL +C SL+ 
Sbjct: 527 G-------------SVDPLRLQQMDRLATLDLQNNDLLHVPPELGNCVSLRT 565


>gi|327282314|ref|XP_003225888.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Anolis
           carolinensis]
          Length = 605

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/415 (34%), Positives = 227/415 (54%), Gaps = 24/415 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +++AAR SG LNLS R L +VP  V++ N D   EA      G  D+WWE  DL KLIL+
Sbjct: 32  LIRAARKSGHLNLSGRELSEVPLHVWRINLDTPEEAKQNLSFGGADRWWEQTDLTKLILS 91

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L +DL+ LP LTVL++  N+L+ LP AIG L  L+ L+VS N +  +P+E+   
Sbjct: 92  SNKLKCLSDDLKLLPALTVLDIHDNQLTSLPLAIGSLENLQKLNVSHNKLTDLPEELLQL 151

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  LP   G+ ++L +   SNN ++++P   A  + + +L++  N+L 
Sbjct: 152 KHLRSLLLQHNELSHLPDEFGKLISLEELDISNNHVSAIPTSFAFLTNLVQLNLSHNQLK 211

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I++   L +L  +KN L  +P  + +++ L +L L +N++  +P  +  C  L 
Sbjct: 212 FLPAE-ISAMKSLRQLDCTKNYLETIPPELANMASLEQLYLRRNKLRYLP-DLPSCTVLK 269

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ L  LDL  N+LK    E   L  +  LDLSNN +S LP
Sbjct: 270 ELHVGENQIEMLKAEHLKHLNSLCVLDLRENKLKSVPDEIALLEGIERLDLSNNDISSLP 329

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP-ENEDSEASTTKEDLIT 350
            ++G ++ L+ L L GNPLRT+R  ++   T  +LKYLR+++  +NE           +T
Sbjct: 330 CKLGNLSQLKFLALEGNPLRTIRRDILQKGTQEILKYLRNKIQDDNEIRPNGVLPVTAMT 389

Query: 351 MATRLSV------TSKELSLEGMNLSAIPSEIWEA---GEITKLDLSRNSIQELP 396
           + ++L V        K L       + IP E+  A     +T ++ S+N + E+P
Sbjct: 390 LPSQLDVNLHALTALKTLDYSEKQATVIPDEVLNAVGNNPVTTVNFSKNHLTEIP 444



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 49/337 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE LK E L++L  L VL++  NKL  +P  I  L  ++ LD+S N I  
Sbjct: 268 LKELHVGENQIEMLKAEHLKHLNSLCVLDLRENKLKSVPDEIALLEGIERLDLSNNDISS 327

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCIT--------------- 150
           +P ++G+ + L       N L+ +   + +       K   N I                
Sbjct: 328 LPCKLGNLSQLKFLALEGNPLRTIRRDILQKGTQEILKYLRNKIQDDNEIRPNGVLPVTA 387

Query: 151 -SLPE----DLADCSKMSKLDVEGNKLTVLSNNLIASW--TMLTELIASKNLLNGMPETI 203
            +LP     +L   + +  LD    + TV+ + ++ +     +T +  SKN L  +P  I
Sbjct: 388 MTLPSQLDVNLHALTALKTLDYSEKQATVIPDEVLNAVGNNPVTTVNFSKNHLTEIPARI 447

Query: 204 GSLSRLI-RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
             L   +  ++   N++ S+   +     L    + NN L++LP E+  L KL  ++L  
Sbjct: 448 VELKETVCDINFSFNKLFSVSLELCMLYRLTHLDVRNNCLTSLPDEMEALGKLQIINLAF 507

Query: 263 NQLKEY--------CVEACQL-----------------RLSVLDLSNNSLSGLPPEIGKM 297
           N+ K +         +EA  L                 +LS LDL NN +  +PPE+G  
Sbjct: 508 NRFKVFPDILYRIPTLEAILLGNNQVGSLDPLQIKKLDQLSTLDLQNNDILHVPPELGNC 567

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           T+LR LLL GNP RT R +++   T A+L+YLRSR+P
Sbjct: 568 TSLRTLLLEGNPFRTPRVTILAKGTDAVLEYLRSRIP 604



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 193/473 (40%), Gaps = 115/473 (24%)

Query: 14  LNLSNRSLRDVPNEVYK---------NFDEAGE-GDKWWEAVDLQKLILAHNNIEKLKED 63
           LN+S+  L D+P E+ +           +E     D++ + + L++L +++N++  +   
Sbjct: 134 LNVSHNKLTDLPEELLQLKHLRSLLLQHNELSHLPDEFGKLISLEELDISNNHVSAIPTS 193

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF---- 119
              L  L  LN+SHN+L  LPA I  +  L+ LD + N +  IP E+ +  +L +     
Sbjct: 194 FAFLTNLVQLNLSHNQLKFLPAEISAMKSLRQLDCTKNYLETIPPELANMASLEQLYLRR 253

Query: 120 ------------------------------------------DCSSNQLKELPSSLGRCL 137
                                                     D   N+LK +P  +    
Sbjct: 254 NKLRYLPDLPSCTVLKELHVGENQIEMLKAEHLKHLNSLCVLDLRENKLKSVPDEIALLE 313

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-----LTELIAS 192
            +     SNN I+SLP  L + S++  L +EGN L  +  +++   T      L   I  
Sbjct: 314 GIERLDLSNNDISSLPCKLGNLSQLKFLALEGNPLRTIRRDILQKGTQEILKYLRNKIQD 373

Query: 193 KNLL--NG-MPET-----------IGSLSRLIRLDLHQNRILSIPSSI---SGCCSLAEF 235
            N +  NG +P T           + +L+ L  LD  + +   IP  +    G   +   
Sbjct: 374 DNEIRPNGVLPVTAMTLPSQLDVNLHALTALKTLDYSEKQATVIPDEVLNAVGNNPVTTV 433

Query: 236 YMGNNALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
               N L+ +PA + +L + +  ++   N+L    +E C L RL+ LD+ NN L+ LP E
Sbjct: 434 NFSKNHLTEIPARIVELKETVCDINFSFNKLFSVSLELCMLYRLTHLDVRNNCLTSLPDE 493

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           +  +  L+ + L  N  +           P +L     R+P               T+  
Sbjct: 494 MEALGKLQIINLAFNRFKVF---------PDIL----YRIP---------------TLEA 525

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            L   ++  SL+       P +I +  +++ LDL  N I  +PPEL +C SL+
Sbjct: 526 ILLGNNQVGSLD-------PLQIKKLDQLSTLDLQNNDILHVPPELGNCTSLR 571



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 14/176 (7%)

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L +  + +N L  L  +L  L  L  LD+H NQL    +    L  L  L++S+N L+ L
Sbjct: 85  LTKLILSSNKLKCLSDDLKLLPALTVLDIHDNQLTSLPLAIGSLENLQKLNVSHNKLTDL 144

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P E+ ++  LR LLL  N L  L                  +L   E+ + S      I 
Sbjct: 145 PEELLQLKHLRSLLLQHNELSHLPDEF-------------GKLISLEELDISNNHVSAIP 191

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +        +L+L    L  +P+EI     + +LD ++N ++ +PPEL++ ASL+
Sbjct: 192 TSFAFLTNLVQLNLSHNQLKFLPAEISAMKSLRQLDCTKNYLETIPPELANMASLE 247


>gi|375364744|ref|NP_001096732.2| leucine-rich repeat-containing protein 40 [Bos taurus]
 gi|358411512|ref|XP_003582049.1| PREDICTED: leucine-rich repeat-containing protein 40 [Bos taurus]
 gi|359064126|ref|XP_003585940.1| PREDICTED: leucine-rich repeat-containing protein 40 [Bos taurus]
          Length = 602

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 157/439 (35%), Positives = 243/439 (55%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA +       ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFNASERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P    +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVPASFSFLSSLMRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L   L +    L  L  + NLL  +P  + S+  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAEL-SGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLRFLP-EFPSCKLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G++  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S+  +  E  +T+
Sbjct: 329 CSLGRL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQNDSVIETAMTL 387

Query: 352 A--TRLSV----TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
              +R++V    T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNVHTIITLKMLDYSDKQTALIPDEVFDAVKSNIITSINFSKNQLCEIPKRIVEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   +L  NK S IS
Sbjct: 448 KEM-VSDVNLSFNKLSFIS 465



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 147/307 (47%), Gaps = 25/307 (8%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ + +++  L  L  L++S+N +S LP ++G LH LK L +  N +  I  EI 
Sbjct: 296 LRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGRLH-LKFLALEGNPLRTIRREII 354

Query: 111 --GSATAL------VKFDCSSNQ------LKELPS----SLGRCLNLSDFKASNNCITSL 152
             G+   L      +K D  S           LPS    ++   + L     S+     +
Sbjct: 355 NKGTQEVLKYLRSKIKDDGPSQNDSVIETAMTLPSESRVNVHTIITLKMLDYSDKQTALI 414

Query: 153 PEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+++ D  K   ++ ++   N+L  +   ++    M++++  S N L+ +   + +L +L
Sbjct: 415 PDEVFDAVKSNIITSINFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCTLQKL 474

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
             LDL  N + S+P  +     L    +  N    LP  L ++  L T+ + +NQ+    
Sbjct: 475 TFLDLRNNFLSSLPEEMESLTGLQTINLSFNRFKILPEVLYRIPTLETILISNNQVGSLD 534

Query: 270 VEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
            +  +    L  LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+
Sbjct: 535 PQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILE 594

Query: 328 YLRSRLP 334
           YLR R+P
Sbjct: 595 YLRDRIP 601



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 116/482 (24%), Positives = 185/482 (38%), Gaps = 125/482 (25%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L L++N +  +   
Sbjct: 133 LNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
              L  L  LN+S N+L  LPA +  +  LK LD + N +  IP E+ S  +L       
Sbjct: 193 FSFLSSLMRLNLSSNQLKSLPAELSGMKRLKHLDCNSNLLETIPPELASMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L     +  L +EGN L  +   +I   T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPCSLGRL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKD 371

Query: 197 NGMPE---------TIGSLSR--------LIRLDLHQNRILSIPSSISGCCS---LAEFY 236
           +G  +         T+ S SR        L  LD    +   IP  +        +    
Sbjct: 372 DGPSQNDSVIETAMTLPSESRVNVHTIITLKMLDYSDKQTALIPDEVFDAVKSNIITSIN 431

Query: 237 MGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++   ++L  N+L    +E C L +L+ LDL NN LS LP E+
Sbjct: 432 FSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCTLQKLTFLDLRNNFLSSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE-----DSEASTTKEDLI 349
             +T L+ + L+ N  + L   L   PT      L + L  N      D +   T E+LI
Sbjct: 492 ESLTGLQTINLSFNRFKILPEVLYRIPT------LETILISNNQVGSLDPQKMKTMENLI 545

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           T                                  LDL  N + ++PPEL +C +L+   
Sbjct: 546 T----------------------------------LDLQNNDLLQIPPELGNCVNLRTLL 571

Query: 410 SD 411
            D
Sbjct: 572 LD 573


>gi|209156068|gb|ACI34266.1| Leucine-rich repeat-containing protein 40 [Salmo salar]
          Length = 447

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/420 (34%), Positives = 224/420 (53%), Gaps = 25/420 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LK AR SG LNLS R L +VP  V++ N D   EA      G  D+WW+  DL KL+L 
Sbjct: 30  LLKTARKSGQLNLSGRGLTEVPQSVWRLNLDTPEEAKQNLSFGADDRWWDQTDLTKLLLP 89

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N +E L ED++ LP LTVL+V  N+L+ LP +IGEL  L+ L +S N + ++P E+ S 
Sbjct: 90  SNKLEALSEDVKLLPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLKELPKEVWSL 149

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N L+ LP  +G   NL D   SNN +T++P+ L + + + KL++  NKL 
Sbjct: 150 KNLTCLQLQQNLLEHLPEGVGLLTNLDDIDLSNNQLTAVPDSLGNLNHLVKLNLSHNKLK 209

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L +  I+    L  L  + N L  +P  +  ++ L +L L  N++  +P   S    L 
Sbjct: 210 SLPSG-ISVMKNLRLLDCTHNQLESIPPVLSQMASLEQLYLRHNKLRFLPELPS--SRLK 266

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++GNN +  L AE L  LS L  L+L  N++K    E   L+ L  LDL NN +S LP
Sbjct: 267 ELHVGNNQIEVLEAEHLKHLSTLSVLELRDNKVKTLPEEIELLQGLERLDLVNNDISSLP 326

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +  +  L+ L L GNPLR +R  L+   T  LLKYLR R+ E+ D +     +  +T+
Sbjct: 327 AALALLPKLKILTLEGNPLRGIRRDLLTKGTNELLKYLRGRIKEDPDGKGDEP-DTAMTL 385

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEA---GEITKLDLSRNSIQELPPELSSC 402
            ++  +      T K L      ++ +P ++++A     +  ++ S+N +  +PP   +C
Sbjct: 386 PSQAKINVHTIKTLKILDYSEKQMACVPDDVFDAVGSEPVASVNFSKNQLAAVPPRYLAC 445



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 148/339 (43%), Gaps = 45/339 (13%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S   L+E+P ++  L++    +   N      D     T L K    SN+L+ L   
Sbjct: 40  LNLSGRGLTEVPQSVWRLNLDTPEEAKQNLSFGADDRWWDQTDLTKLLLPSNKLEALSED 99

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTELI 190
           +     L+     +N +TSLP  + +   + KL +  NKL  L   +   W++  LT L 
Sbjct: 100 VKLLPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLKELPKEV---WSLKNLTCLQ 156

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +NLL  +PE +G L+ L  +DL  N++ ++P S+     L +  + +N L +LP+ + 
Sbjct: 157 LQQNLLEHLPEGVGLLTNLDDIDLSNNQLTAVPDSLGNLNHLVKLNLSHNKLKSLPSGIS 216

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            +  L                       +LD ++N L  +PP + +M +L +L L  N L
Sbjct: 217 VMKNL----------------------RLLDCTHNQLESIPPVLSQMASLEQLYLRHNKL 254

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENE--DSEASTTKEDLITMATRLSVTSKELSLEGMN 368
           R L         P L     SRL E    +++    + + +   + LSV    L L    
Sbjct: 255 RFL---------PELPS---SRLKELHVGNNQIEVLEAEHLKHLSTLSV----LELRDNK 298

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +  +P EI     + +LDL  N I  LP  L+    L++
Sbjct: 299 VKTLPEEIELLQGLERLDLVNNDISSLPAALALLPKLKI 337


>gi|440791488|gb|ELR12726.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 623

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 149/438 (34%), Positives = 224/438 (51%), Gaps = 38/438 (8%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFD-EAGEGDKWWEAVDLQKLILAHNNIEK---- 59
           LK A+ +G + L N  LR +P   +   +   GE D+WW+   + ++ L +N IE+    
Sbjct: 35  LKQAQRTGHMRLCNSGLRAIPTNAFLIHEVRFGEDDQWWDRTPISRIDLTNNEIEEISTA 94

Query: 60  -LKEDLRNLP--------LLTVLN---VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP 107
            L +D    P        L T +N    + NK+  +   + +L  L +LD+S N + ++P
Sbjct: 95  NLAQDDEAKPAKRKHLQELWTEVNTFCAAQNKIVSISPQLFQLENLTTLDLSHNKLARLP 154

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLN-LSDFKASNNCITSLPEDLADCSKMSKLD 166
           DE+ +A  LV     +N+L  LP +LG CL+ LS+   ++N +  LP  +A   ++  LD
Sbjct: 155 DEVANARQLVHLLLQNNELCCLPEALG-CLSALSNLNLAHNRLVELPATMALLPRIEVLD 213

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP-----ETIGSLSRLIRLDLHQNRILS 221
           +  NKLT L       W  L EL    N L G+P     +       L RLDL QNR+  
Sbjct: 214 LSANKLTSLPAEARNGWGTLRELELRGNQLAGLPAVTSKDPTAGWPLLARLDLSQNRLRE 273

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA-CQLRLSVL 280
           +PS ++   SL E Y   N L +LPAEL  L+ L  LDL  N L  +  E    L L +L
Sbjct: 274 LPSDVALFYSLRELYAAKNLLQSLPAELNTLTSLAILDLKENSLTHFKKEHFSNLALQIL 333

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           DLS NSL  +PP +G+MTTL+ L + GNPL   +  +++  T  +LKYLR RLP ++ ++
Sbjct: 334 DLSLNSLKTIPPALGRMTTLKTLAIAGNPLMGFKRGVIDQGTDEILKYLRFRLPPDDQAK 393

Query: 341 ASTTKEDLIT------------MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
            + T   LI             ++ + S  S  LSL    L+A+P++I   G + +LDL 
Sbjct: 394 QTATSFALIVESAYNERSHSLDLSAKFSSPSN-LSLAKNGLTALPAQIEAFGRLRRLDLG 452

Query: 389 RNSIQELPPELSSCASLQ 406
            N +  LP EL  C  L+
Sbjct: 453 DNKLTALPLELGKCVLLE 470



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 175/359 (48%), Gaps = 38/359 (10%)

Query: 12  GSLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLK 61
             L+LS   LR++P++V  + +  E        +++         L  L L  N++   K
Sbjct: 262 ARLDLSQNRLRELPSDVALFYSLRELYAAKNLLQSLPAELNTLTSLAILDLKENSLTHFK 321

Query: 62  -EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-------------- 106
            E   NL L  +L++S N L  +P A+G +  LK+L ++ N +M                
Sbjct: 322 KEHFSNLAL-QILDLSLNSLKTIPPALGRMTTLKTLAIAGNPLMGFKRGVIDQGTDEILK 380

Query: 107 -------PDEIGSATALVKFDCSSNQLKELPSSL---GRCLNLSDFKASNNCITSLPEDL 156
                  PD+    TA        +   E   SL    +  + S+   + N +T+LP  +
Sbjct: 381 YLRFRLPPDDQAKQTATSFALIVESAYNERSHSLDLSAKFSSPSNLSLAKNGLTALPAQI 440

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
               ++ +LD+  NKLT L   L     +L ELI  KN L  +P  +  L+RL  LD+  
Sbjct: 441 EAFGRLRRLDLGDNKLTALPLEL-GKCVLLEELILQKNSLTEIPAVVFELTRLTELDISF 499

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
           NRI  +P  I+   SL       N++ ALP+EL  L KL  LD+  N+++   VE  +L 
Sbjct: 500 NRITVLPPGIAQLVSLTILRARQNSIRALPSELYMLPKLDVLDVFFNKIETLDVELTKLT 559

Query: 277 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            L  LDL +N +  +PP++G MT+LR L L GN +R +R +++   T +LL+YLR+R+P
Sbjct: 560 SLRALDLGSNDIVTVPPQLGLMTSLRSLNLEGNRIRAIRPAILQQGTSSLLEYLRNRIP 618



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 148/367 (40%), Gaps = 68/367 (18%)

Query: 68  PLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK 127
           PLL  L++S N+L ELP+ +   + L+ L  + N +  +P E+ + T+L   D   N L 
Sbjct: 259 PLLARLDLSQNRLRELPSDVALFYSLRELYAAKNLLQSLPAELNTLTSLAILDLKENSLT 318

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
                    L L     S N + ++P  L   + +  L + GN L      +I   T   
Sbjct: 319 HFKKEHFSNLALQILDLSLNSLKTIPPALGRMTTLKTLAIAGNPLMGFKRGVIDQGT--D 376

Query: 188 ELIASKNLLNGMP------ETIGSLSRLIR---------------------LDLHQNRIL 220
           E++  K L   +P      +T  S + ++                      L L +N + 
Sbjct: 377 EIL--KYLRFRLPPDDQAKQTATSFALIVESAYNERSHSLDLSAKFSSPSNLSLAKNGLT 434

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
           ++P+ I     L    +G+N L+ALP ELGK   L  L L  N L E      +L RL+ 
Sbjct: 435 ALPAQIEAFGRLRRLDLGDNKLTALPLELGKCVLLEELILQKNSLTEIPAVVFELTRLTE 494

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LD+S N ++ LPP I ++ +L  L    N +R L S L   P   +L    +++      
Sbjct: 495 LDISFNRITVLPPGIAQLVSLTILRARQNSIRALPSELYMLPKLDVLDVFFNKI------ 548

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                 E L    T+L+                         +  LDL  N I  +PP+L
Sbjct: 549 ------ETLDVELTKLT------------------------SLRALDLGSNDIVTVPPQL 578

Query: 400 SSCASLQ 406
               SL+
Sbjct: 579 GLMTSLR 585



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 59/137 (43%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           +E   L +L ++ N I  L   +  L  LT+L    N +  LP+ +  L  L  LDV FN
Sbjct: 487 FELTRLTELDISFNRITVLPPGIAQLVSLTILRARQNSIRALPSELYMLPKLDVLDVFFN 546

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            I  +  E+   T+L   D  SN +  +P  LG   +L       N I ++   +     
Sbjct: 547 KIETLDVELTKLTSLRALDLGSNDIVTVPPQLGLMTSLRSLNLEGNRIRAIRPAILQQGT 606

Query: 162 MSKLDVEGNKLTVLSNN 178
            S L+   N++   + N
Sbjct: 607 SSLLEYLRNRIPTTTTN 623


>gi|197097556|ref|NP_001124652.1| leucine-rich repeat-containing protein 40 [Pongo abelii]
 gi|75070992|sp|Q5RFE9.1|LRC40_PONAB RecName: Full=Leucine-rich repeat-containing protein 40
 gi|55725286|emb|CAH89508.1| hypothetical protein [Pongo abelii]
          Length = 602

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 155/439 (35%), Positives = 238/439 (54%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELQNLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQFSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNELK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESATETAMTL 387

Query: 352 AT------RLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +      R  +T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIRAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   +L  NK S IS
Sbjct: 448 KEM-VSDVNLSFNKLSFIS 465



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 154/335 (45%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESATETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIRAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVNLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEVESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T  +L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAGILEYLRDRIP 601



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 190/477 (39%), Gaps = 115/477 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E   +L+ L L++N +  +   
Sbjct: 133 LNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQFSNLEDLDLSNNRLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKD 371

Query: 197 NGMPE---------TIGSLSRL-IR-------LDLHQNRILSIPSSISGCCS---LAEFY 236
           +G  +         T+ S SR+ IR       LD    +   IP  +        +    
Sbjct: 372 DGPSQSESATETAMTLPSESRVNIRAIITLKILDYSDKQATLIPDEVFDAVKSNIITSIN 431

Query: 237 MGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++   ++L  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVNLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEV 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+    D
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLD 573


>gi|197632025|gb|ACH70736.1| leucine rich repeat containing 40 [Salmo salar]
          Length = 600

 Score =  207 bits (527), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 149/436 (34%), Positives = 231/436 (52%), Gaps = 29/436 (6%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LK AR SG LNLS R L +VP  V++ N D   EA      G  D+WW+  DL KL+L 
Sbjct: 30  LLKTARKSGQLNLSGRGLTEVPQSVWRLNLDTPEEAKQNLSFGADDRWWDQTDLTKLLLP 89

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N +E L ED++ LP LTVL+V  N+L+ LP +IGEL  L+ L +S N + ++P E+ S 
Sbjct: 90  SNKLEALSEDVKLLPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLKELPKEVWSL 149

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N L+ LP  +G   NL D   SNN +T++P+ L + + + KL++  NKL 
Sbjct: 150 KNLTCLQLQQNLLEHLPEGVGLLTNLDDIDLSNNQLTAVPDSLGNLNHLVKLNLSHNKLK 209

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L +  I+    L  L  + N L  +P  +  ++ L +L L  N++  +P   S    L 
Sbjct: 210 SLPSG-ISVMKNLRLLDCTHNQLESIPPVLSQMASLEQLYLRHNKLRFLPELPS--SRLK 266

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++GNN +  L AE L  LS L  L+L  N++K    E   L+ L  LDL NN +S LP
Sbjct: 267 ELHVGNNQIEVLEAEHLKHLSTLSVLELRDNKVKTLPEEIELLQGLERLDLVNNDISSLP 326

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +  +  L+ L L GNPLR +R  L+   T  LLKYLR R+ E+ D +     +  +T+
Sbjct: 327 AALALLPKLKILTLEGNPLRGIRRDLLTKGTNELLKYLRGRIKEDPDGKGDEP-DTAMTL 385

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEA---GEITKLDLSRNSIQELPPEL--- 399
            ++  +      T K L      ++ +P ++++A     +  ++ S+N +  +PP L   
Sbjct: 386 PSQAKINVHTIKTLKILDYSEKQMACVPDDVFDAVGSEPVASVNFSKNQLAAVPPRLVEL 445

Query: 400 -SSCASLQVKFSDLVT 414
             S + + + F+ L +
Sbjct: 446 KDSVSDINLGFNKLTS 461



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 151/339 (44%), Gaps = 55/339 (16%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L + +N IE L+ E L++L  L+VL +  NK+  LP  I  L  L+ LD+  N I  
Sbjct: 265 LKELHVGNNQIEVLEAEHLKHLSTLSVLELRDNKVKTLPEEIELLQGLERLDLVNNDISS 324

Query: 106 IPDEIGSATALVKFDCSSN-----------------------QLKELPSSLG-------- 134
           +P  +     L       N                       ++KE P   G        
Sbjct: 325 LPAALALLPKLKILTLEGNPLRGIRRDLLTKGTNELLKYLRGRIKEDPDGKGDEPDTAMT 384

Query: 135 ------------RCLNLSDFKASNNCITSLPEDLADC---SKMSKLDVEGNKLTVLSNNL 179
                       + L + D+  S   +  +P+D+ D      ++ ++   N+L  +   L
Sbjct: 385 LPSQAKINVHTIKTLKILDY--SEKQMACVPDDVFDAVGSEPVASVNFSKNQLAAVPPRL 442

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           +     ++++    N L  +P     L +L  +DL  N + S+P  I     L    +  
Sbjct: 443 VELKDSVSDINLGFNKLTSLPLEFCMLQQLAHIDLRNNLLTSLPMEIEALMKLRSITLSF 502

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDLSNNSLSGLPPEIG 295
           N     P  L ++  L T+ + +NQ+    +   QL+    LS LDL NN +  +PPE+G
Sbjct: 503 NRFKLFPEVLYRVPSLETILISNNQVG--AINPLQLKALDKLSTLDLQNNDIMQVPPELG 560

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             T+LR L+L GNP R  R+++V+  T A+L+YLRSR+P
Sbjct: 561 NCTSLRALMLDGNPFRNPRAAIVSRGTDAVLEYLRSRIP 599



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 195/477 (40%), Gaps = 116/477 (24%)

Query: 14  LNLSNRSLRDVPNEVY--KNFD----EAGEGDKWWEAV----DLQKLILAHNNIEKLKED 63
           L+LS+  L+++P EV+  KN      +    +   E V    +L  + L++N +  + + 
Sbjct: 132 LSLSHNKLKELPKEVWSLKNLTCLQLQQNLLEHLPEGVGLLTNLDDIDLSNNQLTAVPDS 191

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           L NL  L  LN+SHNKL  LP+ I  +  L+ LD + N +  IP  +    +L +     
Sbjct: 192 LGNLNHLVKLNLSHNKLKSLPSGISVMKNLRLLDCTHNQLESIPPVLSQMASLEQLYLRH 251

Query: 124 NQLK---ELPSSLGR------------------------CLNLSDFKAS----------- 145
           N+L+   ELPSS  +                         L L D K             
Sbjct: 252 NKLRFLPELPSSRLKELHVGNNQIEVLEAEHLKHLSTLSVLELRDNKVKTLPEEIELLQG 311

Query: 146 -------NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS-----K 193
                  NN I+SLP  LA   K+  L +EGN L  +  +L+   T   EL+       K
Sbjct: 312 LERLDLVNNDISSLPAALALLPKLKILTLEGNPLRGIRRDLLTKGT--NELLKYLRGRIK 369

Query: 194 NLLNGM---PETIGSLSRLIRLDLHQNRILSI-----------PSSI---SGCCSLAEFY 236
              +G    P+T  +L    ++++H  + L I           P  +    G   +A   
Sbjct: 370 EDPDGKGDEPDTAMTLPSQAKINVHTIKTLKILDYSEKQMACVPDDVFDAVGSEPVASVN 429

Query: 237 MGNNALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEI 294
              N L+A+P  L +L   +  ++L  N+L    +E C L+ L+ +DL NN L+ LP EI
Sbjct: 430 FSKNQLAAVPPRLVELKDSVSDINLGFNKLTSLPLEFCMLQQLAHIDLRNNLLTSLPMEI 489

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  LR + L+ N  +     L   P+                            + T 
Sbjct: 490 EALMKLRSITLSFNRFKLFPEVLYRVPS----------------------------LETI 521

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           L   ++  ++  + L A+        +++ LDL  N I ++PPEL +C SL+    D
Sbjct: 522 LISNNQVGAINPLQLKAL-------DKLSTLDLQNNDIMQVPPELGNCTSLRALMLD 571


>gi|32425389|gb|AAH03407.2| LRRC40 protein, partial [Homo sapiens]
          Length = 581

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 155/439 (35%), Positives = 237/439 (53%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 10  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 69

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 70  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 129

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 130 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELK 189

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 190 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 247

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   LR L  LDLSNN +S LP
Sbjct: 248 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLP 307

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  +++  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 308 YSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTL 366

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   +T ++ S+N + E+P  +   
Sbjct: 367 PSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVEL 426

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   DL  NK S IS
Sbjct: 427 KEM-VSDVDLSFNKLSFIS 444



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 246 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISS 305

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 306 LPYSLGNLHLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMT 365

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 366 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVE 425

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 426 LKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 485

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 486 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 545

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 546 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 580



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 191/477 (40%), Gaps = 115/477 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L L++N++  +   
Sbjct: 112 LNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPAS 171

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 172 FSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 231

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 232 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLR 291

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I+  T  + + + SK   
Sbjct: 292 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKD 350

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 351 DGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSIN 410

Query: 237 MGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++   +DL  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 411 FSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEM 470

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 471 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 502

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+    D
Sbjct: 503 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLD 552


>gi|21361633|ref|NP_060238.3| leucine-rich repeat-containing protein 40 [Homo sapiens]
 gi|74761553|sp|Q9H9A6.1|LRC40_HUMAN RecName: Full=Leucine-rich repeat-containing protein 40
 gi|10434638|dbj|BAB14326.1| unnamed protein product [Homo sapiens]
 gi|14250313|gb|AAH08586.1| Leucine rich repeat containing 40 [Homo sapiens]
 gi|119626865|gb|EAX06460.1| leucine rich repeat containing 40 [Homo sapiens]
 gi|325463579|gb|ADZ15560.1| leucine rich repeat containing 40 [synthetic construct]
          Length = 602

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 155/439 (35%), Positives = 237/439 (53%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   LR L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  +++  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   +T ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   DL  NK S IS
Sbjct: 448 KEM-VSDVDLSFNKLSFIS 465



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 191/477 (40%), Gaps = 115/477 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L L++N++  +   
Sbjct: 133 LNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLR 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I+  T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSIN 431

Query: 237 MGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++   +DL  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+    D
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLD 573


>gi|291398713|ref|XP_002715973.1| PREDICTED: leucine rich repeat containing 40 [Oryctolagus
           cuniculus]
          Length = 602

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 151/439 (34%), Positives = 236/439 (53%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEAGEG---------DKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   E          ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDVPEEANQNLSFSTSERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLADDLRLLPALTVLDIHDNQLTTLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P    +  +L D   SNN +T++    +  S + ++++  N L 
Sbjct: 151 RNLKSLYLQHNELAVIPEGFEQLSSLEDLDLSNNRLTTISAGFSSLSGLVRINLSSNHLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L  S NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-ISRMKKLRHLDCSSNLLESIPPELAGMESLELLYLRRNKLRFLP-EFPSCKLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L A+ L  LS +  L+L  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLAADHLKHLSSILVLELRDNKLKSVPDEISLLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAMTL 387

Query: 352 AT------RLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +         VT K L       + IP E+++A +   I  ++ S+N + E+P  ++  
Sbjct: 388 PSESKVNVHAIVTLKLLDYSDKQTTLIPDEVFDAIKNNIIISVNFSKNQLSEIPKRITEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   +L  NK SCIS
Sbjct: 448 KEM-VTEVNLSFNKLSCIS 465



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 51/337 (15%)

Query: 47  LQKLILAHNNIEKLKED-LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L  D L++L  + VL +  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLAADHLKHLSSILVLELRDNKLKSVPDEISLLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             D  +     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   +  ++   N+L+ +   +  
Sbjct: 387 LPSESKVNVHAIVTLKLLDYSDKQTTLIPDEVFDAIKNNIIISVNFSKNQLSEIPKRITE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M+TE+  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVTEVNLSFNKLSCISLELCMLQKLTFLDLRSNFLNSLPEEMKSLIRLQVINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDLSNNSLSGLPPEIGKM 297
              LP  L  +  L T+ + +NQ+    V+  +++    L+ LDL NN L  +PPE+G  
Sbjct: 507 FKILPEVLYHIPTLETILISNNQVG--SVDPQKMKTMENLTTLDLQNNDLLQIPPELGNC 564

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 565 VNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 98/422 (23%), Positives = 176/422 (41%), Gaps = 74/422 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           +NLS+  L+ +P E+ +                L+ L  + N +E +  +L  +  L +L
Sbjct: 202 INLSSNHLKSLPAEISR-------------MKKLRHLDCSSNLLESIPPELAGMESLELL 248

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I M   D +   ++++  +   N+LK +P  
Sbjct: 249 YLRRNKLRFLPE-FPSCKLLKELHVGENQIEMLAADHLKHLSSILVLELRDNKLKSVPDE 307

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
           +    +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + 
Sbjct: 308 ISLLQSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLR 366

Query: 192 SKNLLNGMPET-----------------IGSLSRLIRLDLHQNRILSIPSSISGCCS--- 231
           SK   +G  ++                 + ++  L  LD    +   IP  +        
Sbjct: 367 SKIKDDGPSQSDSVTETAMTLPSESKVNVHAIVTLKLLDYSDKQTTLIPDEVFDAIKNNI 426

Query: 232 LAEFYMGNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N LS +P  + +L ++ T ++L  N+L    +E C L +L+ LDL +N L+ 
Sbjct: 427 IISVNFSKNQLSEIPKRITELKEMVTEVNLSFNKLSCISLELCMLQKLTFLDLRSNFLNS 486

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP E+  +  L+ + L+ N  + L   L + PT                           
Sbjct: 487 LPEEMKSLIRLQVINLSFNRFKILPEVLYHIPT--------------------------- 519

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + T L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+   
Sbjct: 520 -LETIL-ISNNQVG------SVDPQKMKTMENLTTLDLQNNDLLQIPPELGNCVNLRTLL 571

Query: 410 SD 411
            D
Sbjct: 572 LD 573


>gi|345322696|ref|XP_001505628.2| PREDICTED: leucine-rich repeat-containing protein 40
           [Ornithorhynchus anatinus]
          Length = 612

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 149/415 (35%), Positives = 226/415 (54%), Gaps = 24/415 (5%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           D P E  +N    G  D+WWE  DL KLIL++N ++ L +DLR LP LTVL+V  N+L+ 
Sbjct: 69  DTPEEANQNLS-FGAADRWWEQTDLTKLILSNNKLQTLSDDLRLLPALTVLDVHDNQLAS 127

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP A+GEL  L+ L+VS N +  +P+EI +   L      +N+L  +P   G+ LNL + 
Sbjct: 128 LPCAVGELENLQRLNVSHNKLKILPEEIKNLRNLKSLFLQNNELTCIPEGFGQLLNLEEL 187

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN ++S+P   +  + + +L++  N+L  L    I+    L +L  + NLL  +P  
Sbjct: 188 DISNNHLSSVPASFSTLTNLVRLNLARNQLKSLPTE-ISGMKRLKQLDCTCNLLETIPSE 246

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLH 261
           + S+  L  L L +N++ SIP     C SL E ++G N +  + AE L  LS +  LDL 
Sbjct: 247 LASMESLELLYLRRNKLRSIP-EFPFCRSLKELHVGENQIEVIGAEHLKHLSSINVLDLR 305

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+LK    E   L+ L  LDL+NN +S LP  +G +  L+ L L GNP+RT+R  L+  
Sbjct: 306 DNKLKSIPDEITLLQALERLDLTNNDISSLPYALGNLPHLKFLALEGNPMRTIRRDLLTK 365

Query: 321 PTPALLKYLRSRL-----PENEDSEASTTKEDLITMATRLS----VTSKELSLEGMNLSA 371
            T  L+KYLRS++     P+NE +   T     +   +R++    VT K L       +A
Sbjct: 366 GTQELMKYLRSKIKDDAPPQNETTTTGTAMT--LPSESRVNVHAIVTLKILEYSEKQTTA 423

Query: 372 IPSEIWEA---GEITKLDLSRNSIQELPPELSSCASLQVKFSD--LVTNKESCIS 421
           IP E+++A     +T ++ S+N + E+P  +     L+   SD  L  NK S IS
Sbjct: 424 IPDEVFDAVGRNTVTSINFSKNQLNEVPKRI---VELKETVSDVNLSFNKLSLIS 475



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 157/338 (46%), Gaps = 51/338 (15%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE +  E L++L  + VL++  NKL  +P  I  L  L+ LD++ N I  
Sbjct: 275 LKELHVGENQIEVIGAEHLKHLSSINVLDLRDNKLKSIPDEITLLQALERLDLTNNDISS 334

Query: 106 IPDEIGSATAL------------VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS-- 151
           +P  +G+   L            ++ D  +   +EL   L   +   D    N   T+  
Sbjct: 335 LPYALGNLPHLKFLALEGNPMRTIRRDLLTKGTQELMKYLRSKIK-DDAPPQNETTTTGT 393

Query: 152 ---LPED----LADCSKMSKLDVEGNKLTVLSNNLI--ASWTMLTELIASKNLLNGMPET 202
              LP +    +     +  L+    + T + + +        +T +  SKN LN +P+ 
Sbjct: 394 AMTLPSESRVNVHAIVTLKILEYSEKQTTAIPDEVFDAVGRNTVTSINFSKNQLNEVPKR 453

Query: 203 IGSLSRLIR-LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
           I  L   +  ++L  N++  I   IS    L    + NN L+ALP E+  L KL T++L 
Sbjct: 454 IVELKETVSDVNLSFNKLSLISLEISVLQKLTHLDIRNNLLTALPDEMSALKKLQTINLS 513

Query: 262 SNQLKE-----YC----------------VEACQLR----LSVLDLSNNSLSGLPPEIGK 296
            N+ K      YC                V+A +++    L+ LDL NN L  +PPE+G 
Sbjct: 514 FNRFKTFPDVLYCIPTLETILFSNNQVGSVDALRMKKMDKLATLDLQNNDLLQVPPELGN 573

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             TLR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 574 CMTLRTLLLEGNPFRIPRAAILAKGTAAVLEYLRDRIP 611



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 99/475 (20%), Positives = 188/475 (39%), Gaps = 117/475 (24%)

Query: 14  LNLSNRSLRDVPNEVYKN-------FDEAGE----GDKWWEAVDLQKLILAHNNIEKLKE 62
           LN+S+  L+ +P E+ KN       F +  E     + + + ++L++L +++N++  +  
Sbjct: 141 LNVSHNKLKILPEEI-KNLRNLKSLFLQNNELTCIPEGFGQLLNLEELDISNNHLSSVPA 199

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------ 116
               L  L  LN++ N+L  LP  I  +  LK LD + N +  IP E+ S  +L      
Sbjct: 200 SFSTLTNLVRLNLARNQLKSLPTEISGMKRLKQLDCTCNLLETIPSELASMESLELLYLR 259

Query: 117 ---------VKF-------------------------------DCSSNQLKELPSSLGRC 136
                      F                               D   N+LK +P  +   
Sbjct: 260 RNKLRSIPEFPFCRSLKELHVGENQIEVIGAEHLKHLSSINVLDLRDNKLKSIPDEITLL 319

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNL 195
             L     +NN I+SLP  L +   +  L +EGN +  +  +L+   T  L + + SK  
Sbjct: 320 QALERLDLTNNDISSLPYALGNLPHLKFLALEGNPMRTIRRDLLTKGTQELMKYLRSKIK 379

Query: 196 LNGMPET------------------IGSLSRLIRLDLHQNRILSIPSSI---SGCCSLAE 234
            +  P+                   + ++  L  L+  + +  +IP  +    G  ++  
Sbjct: 380 DDAPPQNETTTTGTAMTLPSESRVNVHAIVTLKILEYSEKQTTAIPDEVFDAVGRNTVTS 439

Query: 235 FYMGNNALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 292
                N L+ +P  + +L + +  ++L  N+L    +E   L +L+ LD+ NN L+ LP 
Sbjct: 440 INFSKNQLNEVPKRIVELKETVSDVNLSFNKLSLISLEISVLQKLTHLDIRNNLLTALPD 499

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           E+  +  L+ + L+ N  +T    L   PT                            + 
Sbjct: 500 EMSALKKLQTINLSFNRFKTFPDVLYCIPT----------------------------LE 531

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           T L   ++  S++ + +  +        ++  LDL  N + ++PPEL +C +L+ 
Sbjct: 532 TILFSNNQVGSVDALRMKKM-------DKLATLDLQNNDLLQVPPELGNCMTLRT 579


>gi|41282208|ref|NP_956156.2| leucine-rich repeat-containing protein 40 [Danio rerio]
 gi|37595350|gb|AAQ94561.1| hypothetical protein FLJ20331 [Danio rerio]
          Length = 601

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/436 (33%), Positives = 229/436 (52%), Gaps = 27/436 (6%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEAGEG---------DKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R L +VP  V++ N D   E          D+WWE  DL KL+L+
Sbjct: 29  LLKAARKSGQLNLSGRGLTEVPASVWRLNLDTPQEAKQNVSFGAEDRWWEQTDLTKLLLS 88

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ + +D++ LP L VL++  N+LS LP +IG+L  L+ L +S N + ++P  +   
Sbjct: 89  SNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGVWRL 148

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           T L       N ++++P  LG+ +NL D   SNN +  +PE LA+   + KLD+  NKL 
Sbjct: 149 TNLRCLHLQQNLIEQIPRDLGQLVNLDDLDLSNNHLIDIPESLANLQNLVKLDLSCNKLK 208

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L  S+N +  +P  +  +  L +L L  N++  +P  +  C +L 
Sbjct: 209 SLPPA-ISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRYLP-ELPCCKTLK 266

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E + GNN +  L AE L  L+ L  L+L  N++K    E   L+ L  LDL+NN +S LP
Sbjct: 267 ELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLP 326

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE------NEDSEASTTK 345
             +G +  L+ L L GNPLR +R  L+   T  LLKYLRSR+ E       E+ + + T 
Sbjct: 327 CGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQEPPNGGLKEEPKTAMTF 386

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPEL--- 399
           +    +      T K L       ++IP ++ +A +   +  ++ S+N +  +P  +   
Sbjct: 387 QSQAKINIHAIKTLKTLDYSEKQDASIPDDVLDAVDGNPVANVNFSKNQLTAVPHRIVDL 446

Query: 400 -SSCASLQVKFSDLVT 414
             + A + + F+ L T
Sbjct: 447 KDTLADINLGFNKLTT 462



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 154/309 (49%), Gaps = 28/309 (9%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ L E++  L  L  L++++N +S LP  +G L  LKSL +  N +  I  ++ 
Sbjct: 294 LRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLL 353

Query: 111 -GSATALVKFDCSSNQ------LKELPSS-----------LGRCLNLSDFKASNNCITSL 152
                 L+K+  S  Q      LKE P +           +     L     S     S+
Sbjct: 354 TKGTGELLKYLRSRVQEPPNGGLKEEPKTAMTFQSQAKINIHAIKTLKTLDYSEKQDASI 413

Query: 153 PEDL---ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+D+    D + ++ ++   N+LT + + ++     L ++    N L  +P     L +L
Sbjct: 414 PDDVLDAVDGNPVANVNFSKNQLTAVPHRIVDLKDTLADINLGFNKLTTIPADFCHLKQL 473

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           + +DL  N ++S+P  + G   L    +  N   + P  L ++  L T+ + SNQ+    
Sbjct: 474 MHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQVG--G 531

Query: 270 VEACQL----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           ++A Q+    RLS LDLSNN +  +PPE+G  T+LR L+L GNP R  R++++   T A+
Sbjct: 532 IDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAILIKGTDAV 591

Query: 326 LKYLRSRLP 334
           L+YLRSR+P
Sbjct: 592 LEYLRSRIP 600



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 172/438 (39%), Gaps = 104/438 (23%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V+L  L L++N++  + E L NL  L  L++S NKL  LP AI ++  L+ LD S N 
Sbjct: 170 QLVNLDDLDLSNNHLIDIPESLANLQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQ 229

Query: 103 IMKIPD----------------------EIGSATALVKFDCSSNQL-------------- 126
           +  IP                       E+     L +  C +NQ+              
Sbjct: 230 MESIPPVLAQMESLEQLYLRHNKLRYLPELPCCKTLKELHCGNNQIEVLEAEHLKHLNAL 289

Query: 127 ----------KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
                     K LP  +     L     +NN I+SLP  L    K+  L +EGN L  + 
Sbjct: 290 SLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIR 349

Query: 177 NNLIASWT-MLTELIASK------NLLNGMPET-----------IGSLSRLIRLDLHQNR 218
            +L+   T  L + + S+        L   P+T           I ++  L  LD  + +
Sbjct: 350 RDLLTKGTGELLKYLRSRVQEPPNGGLKEEPKTAMTFQSQAKINIHAIKTLKTLDYSEKQ 409

Query: 219 ILSIPSSISGCCS---LAEFYMGNNALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQ 274
             SIP  +        +A      N L+A+P  +  L   L  ++L  N+L     + C 
Sbjct: 410 DASIPDDVLDAVDGNPVANVNFSKNQLTAVPHRIVDLKDTLADINLGFNKLTTIPADFCH 469

Query: 275 LR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L+ L  +DL NN L  LP E+  +  LR ++L+ N  ++    L              R+
Sbjct: 470 LKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKSFPEVLY-------------RI 516

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
           P  E    S+ +   I      +V  K LS                  ++ LDLS N I 
Sbjct: 517 PSLETILISSNQVGGID-----AVQMKTLS-----------------RLSTLDLSNNDIM 554

Query: 394 ELPPELSSCASLQVKFSD 411
           ++PPEL +C SL+    D
Sbjct: 555 QVPPELGNCTSLRALMLD 572


>gi|82240198|sp|Q7SXW3.1|LRC40_DANRE RecName: Full=Leucine-rich repeat-containing protein 40
 gi|32766407|gb|AAH55223.1| Leucine rich repeat containing 40 [Danio rerio]
          Length = 601

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 144/436 (33%), Positives = 229/436 (52%), Gaps = 27/436 (6%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEAGEG---------DKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R L +VP  V++ N D   E          D+WWE  DL KL+L+
Sbjct: 29  LLKAARKSGQLNLSGRGLTEVPASVWRLNLDTPQEAKQNVSFGAEDRWWEQTDLTKLLLS 88

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ + +D++ LP L VL++  N+LS LP +IG+L  L+ L +S N + ++P  +   
Sbjct: 89  SNKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGVWRL 148

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           T L       N ++++P  LG+ +NL +   SNN +  +PE LA+   + KLD+  NKL 
Sbjct: 149 TNLRCLHLQQNLIEQIPRDLGQLVNLDELDLSNNHLIDIPESLANLQNLVKLDLSCNKLK 208

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L  S+N +  +P  +  +  L +L L  N++  +P  +  C +L 
Sbjct: 209 SLPPA-ISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRYLP-ELPCCKTLK 266

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E + GNN +  L AE L  L+ L  L+L  N++K    E   L+ L  LDL+NN +S LP
Sbjct: 267 ELHCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLP 326

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLR +R  L+   T  LLKYLRSR+ E  +       +  +T 
Sbjct: 327 CGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQEPPNGGLKEEPKTAMTF 386

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPEL--- 399
            ++  +      T K L       + IP ++++A +   +  ++ S+N +  +P  +   
Sbjct: 387 PSQAKINVHAIKTLKTLDYSEKQDATIPDDVFDAVDGNPVANVNFSKNQLTAVPHRIVDL 446

Query: 400 -SSCASLQVKFSDLVT 414
             S A + + F+ L T
Sbjct: 447 KDSLADINLGFNKLTT 462



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 154/309 (49%), Gaps = 28/309 (9%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ L E++  L  L  L++++N +S LP  +G L  LKSL +  N +  I  ++ 
Sbjct: 294 LRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLL 353

Query: 111 -GSATALVKFDCSSNQ------LKELPSS-----------LGRCLNLSDFKASNNCITSL 152
                 L+K+  S  Q      LKE P +           +     L     S     ++
Sbjct: 354 TKGTGELLKYLRSRVQEPPNGGLKEEPKTAMTFPSQAKINVHAIKTLKTLDYSEKQDATI 413

Query: 153 PEDLADC---SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+D+ D    + ++ ++   N+LT + + ++     L ++    N L  +P     L +L
Sbjct: 414 PDDVFDAVDGNPVANVNFSKNQLTAVPHRIVDLKDSLADINLGFNKLTTIPADFCHLKQL 473

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           + +DL  N ++S+P  + G   L    +  N   + P  L ++  L T+ + SNQ+    
Sbjct: 474 MHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQVG--G 531

Query: 270 VEACQL----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           ++A Q+    RLS LDLSNN +  +PPE+G  T+LR L+L GNP R  R++++   T A+
Sbjct: 532 IDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAILIKGTDAV 591

Query: 326 LKYLRSRLP 334
           L+YLRSR+P
Sbjct: 592 LEYLRSRIP 600



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 173/438 (39%), Gaps = 104/438 (23%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V+L +L L++N++  + E L NL  L  L++S NKL  LP AI ++  L+ LD S N 
Sbjct: 170 QLVNLDELDLSNNHLIDIPESLANLQNLVKLDLSCNKLKSLPPAISQMKNLRMLDCSRNQ 229

Query: 103 IMKIPD----------------------EIGSATALVKFDCSSNQL-------------- 126
           +  IP                       E+     L +  C +NQ+              
Sbjct: 230 MESIPPVLAQMESLEQLYLRHNKLRYLPELPCCKTLKELHCGNNQIEVLEAEHLKHLNAL 289

Query: 127 ----------KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
                     K LP  +     L     +NN I+SLP  L    K+  L +EGN L  + 
Sbjct: 290 SLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIR 349

Query: 177 NNLIASWT-MLTELIASK------NLLNGMPET-----------IGSLSRLIRLDLHQNR 218
            +L+   T  L + + S+        L   P+T           + ++  L  LD  + +
Sbjct: 350 RDLLTKGTGELLKYLRSRVQEPPNGGLKEEPKTAMTFPSQAKINVHAIKTLKTLDYSEKQ 409

Query: 219 ILSIPSSISGCCS---LAEFYMGNNALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQ 274
             +IP  +        +A      N L+A+P  +  L   L  ++L  N+L     + C 
Sbjct: 410 DATIPDDVFDAVDGNPVANVNFSKNQLTAVPHRIVDLKDSLADINLGFNKLTTIPADFCH 469

Query: 275 LR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L+ L  +DL NN L  LP E+  +  LR ++L+ N  ++    L              R+
Sbjct: 470 LKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNRFKSFPEVLY-------------RI 516

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
           P  E    S+ +   I      +V  K LS                  ++ LDLS N I 
Sbjct: 517 PSLETILISSNQVGGID-----AVQMKTLS-----------------RLSTLDLSNNDIM 554

Query: 394 ELPPELSSCASLQVKFSD 411
           ++PPEL +C SL+    D
Sbjct: 555 QVPPELGNCTSLRALMLD 572


>gi|332222157|ref|XP_003260233.1| PREDICTED: leucine-rich repeat-containing protein 40 [Nomascus
           leucogenys]
          Length = 602

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 155/439 (35%), Positives = 237/439 (53%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESATETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   +L  NK S IS
Sbjct: 448 KEM-VSDVNLSFNKLSFIS 465



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESATETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVNLSFNKLSFISVELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 110/477 (23%), Positives = 190/477 (39%), Gaps = 115/477 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L L++N++  +   
Sbjct: 133 LNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSIN 431

Query: 237 MGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++   ++L  N+L    VE C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVNLSFNKLSFISVELCVLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+    D
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLD 573


>gi|114557142|ref|XP_513483.2| PREDICTED: leucine-rich repeat-containing protein 40 [Pan
           troglodytes]
 gi|410217710|gb|JAA06074.1| leucine rich repeat containing 40 [Pan troglodytes]
 gi|410257504|gb|JAA16719.1| leucine rich repeat containing 40 [Pan troglodytes]
 gi|410300344|gb|JAA28772.1| leucine rich repeat containing 40 [Pan troglodytes]
 gi|410331221|gb|JAA34557.1| leucine rich repeat containing 40 [Pan troglodytes]
          Length = 602

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 155/439 (35%), Positives = 237/439 (53%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  +++  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   DL  NK S IS
Sbjct: 448 KEM-VSDVDLSFNKLSFIS 465



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 109/477 (22%), Positives = 189/477 (39%), Gaps = 115/477 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L L++N++  +   
Sbjct: 133 LNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I+  T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSIN 431

Query: 237 MGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++   +DL  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L   L                              + T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKMLPEVLYR----------------------------IFTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+    D
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLD 573


>gi|397521130|ref|XP_003830656.1| PREDICTED: leucine-rich repeat-containing protein 40 [Pan paniscus]
          Length = 602

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 155/439 (35%), Positives = 237/439 (53%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  +++  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   DL  NK S IS
Sbjct: 448 KEM-VSDVDLSFNKLSFIS 465



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLGGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 109/472 (23%), Positives = 190/472 (40%), Gaps = 115/472 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L L++N++  +   
Sbjct: 133 LNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I+  T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSIN 431

Query: 237 MGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++   +DL  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLR 568


>gi|402854920|ref|XP_003892099.1| PREDICTED: leucine-rich repeat-containing protein 40 [Papio anubis]
          Length = 602

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 155/439 (35%), Positives = 236/439 (53%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E++ A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   +L  NK S IS
Sbjct: 448 KEM-VSDVNLSFNKLSFIS 465



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ +  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILIKGTAAILEYLRDRIP 601



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 109/477 (22%), Positives = 189/477 (39%), Gaps = 115/477 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L L++N +  +   
Sbjct: 133 LNVSHNKLKILPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESAAETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSIN 431

Query: 237 MGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++   ++L  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+    D
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLD 573


>gi|344279012|ref|XP_003411285.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Loxodonta africana]
          Length = 602

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 151/439 (34%), Positives = 244/439 (55%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ + +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSITDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P    +  +L D   S+N +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKGLYLQHNELTCIPEGFEQLSSLEDLDLSSNRLTTVPVSFSALSSLVRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L  + NLL  +P  +  +  L  L L +N++ S+P     C  L 
Sbjct: 211 SLPAE-ISRMKKLKHLDCNSNLLETIPSELAGMESLELLYLRRNKLHSLP-QFPSCRLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  L+L  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLGAEHLKHLNSILVLELRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  +++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIRDDRPTQSDSVTETAMTL 387

Query: 352 A--TRLSV----TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
              +R++V    T K L       ++IP E+++A +   +T ++ S+N + E+P  +   
Sbjct: 388 PSESRVNVHAITTLKTLDYSDKQKTSIPDEVFDAVKSHIVTSVNFSKNELCEIPKRIVEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   +L  NK S +S
Sbjct: 448 KEM-VSDVNLSFNKLSFVS 465



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 148/307 (48%), Gaps = 25/307 (8%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ + +++  L  L  L++S+N +S LP ++G LH LK L +  N +  I  EI 
Sbjct: 296 LRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIRREII 354

Query: 111 --GSATAL------------VKFDCSSNQLKELPS----SLGRCLNLSDFKASNNCITSL 152
             G+   L             + D  +     LPS    ++     L     S+   TS+
Sbjct: 355 NKGTQEVLKYLRSKIRDDRPTQSDSVTETAMTLPSESRVNVHAITTLKTLDYSDKQKTSI 414

Query: 153 PEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+++ D  K   ++ ++   N+L  +   ++    M++++  S N L+ +   +  L +L
Sbjct: 415 PDEVFDAVKSHIVTSVNFSKNELCEIPKRIVELKEMVSDVNLSFNKLSFVSLELCMLQKL 474

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
             LDL  N + S+P  +     L    +  N    LP  L ++  L T+ + +NQ+    
Sbjct: 475 TFLDLRNNFLNSLPEEMESLIRLQMINLSFNRFKILPEVLYRIPTLETVLISNNQVGSVD 534

Query: 270 VEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
            +  ++   L+ LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+
Sbjct: 535 PQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILE 594

Query: 328 YLRSRLP 334
           YLR R+P
Sbjct: 595 YLRDRIP 601



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 173/422 (40%), Gaps = 74/422 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L+ +P E+ +                L+ L    N +E +  +L  +  L +L
Sbjct: 202 LNLSSNQLKSLPAEISR-------------MKKLKHLDCNSNLLETIPSELAGMESLELL 248

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I M   + +    +++  +   N+LK +P  
Sbjct: 249 YLRRNKLHSLPQ-FPSCRLLKELHVGENQIEMLGAEHLKHLNSILVLELRDNKLKSVPDE 307

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +    +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T        
Sbjct: 308 ITLLQSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLR 366

Query: 193 KNLLNGMP-------ET-----------IGSLSRLIRLDLHQNRILSIPSSISGCCS--- 231
             + +  P       ET           + +++ L  LD    +  SIP  +        
Sbjct: 367 SKIRDDRPTQSDSVTETAMTLPSESRVNVHAITTLKTLDYSDKQKTSIPDEVFDAVKSHI 426

Query: 232 LAEFYMGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N L  +P  + +L ++   ++L  N+L    +E C L +L+ LDL NN L+ 
Sbjct: 427 VTSVNFSKNELCEIPKRIVELKEMVSDVNLSFNKLSFVSLELCMLQKLTFLDLRNNFLNS 486

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP E+  +  L+ + L+ N  + L         P +L     R+P               
Sbjct: 487 LPEEMESLIRLQMINLSFNRFKIL---------PEVL----YRIP--------------- 518

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           T+ T L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+   
Sbjct: 519 TLETVL-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLL 571

Query: 410 SD 411
            D
Sbjct: 572 LD 573


>gi|326925538|ref|XP_003208970.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Meleagris gallopavo]
          Length = 735

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 138/391 (35%), Positives = 213/391 (54%), Gaps = 20/391 (5%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           D P E ++N    G  D+WWE  DL KLILA N ++ L ED+R LP L+VL+V  N+L+ 
Sbjct: 193 DTPEEAHQNLS-FGAADRWWEQTDLTKLILASNQLQCLSEDVRLLPALSVLDVHDNQLTS 251

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP+A+G+L  L+ LDVS N +  IP+E+   + L       N+L  LP   G+ ++L + 
Sbjct: 252 LPSALGQLENLQKLDVSHNKLKSIPEELLQLSHLKSLLLQHNELSHLPDGFGQLVSLEEL 311

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN +T +P   A    + +L++  N+L  L  + I++   L +L  +KN L  +P  
Sbjct: 312 DLSNNHLTDIPTSFALLINLVRLNLACNQLKNLPAD-ISAMKSLKQLDCTKNYLETVPSE 370

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLH 261
           + S++ L +L L +N++ S+P  +  C  L E + G N +  L AE L  L+ L  L+L 
Sbjct: 371 LASMASLEQLYLRKNKLRSLP-ELPSCKLLKELHAGENQIEILNAENLKHLNSLSVLELR 429

Query: 262 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N++K    E   L +L  LDL+NN +S LP  +G ++ L+ L L GNPLR +R  L+  
Sbjct: 430 DNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRAIRRDLLQK 489

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS---------VTSKELSLEGMNLSA 371
            T  LLKYLRSR+   +D  AS  +E  +T  T  S          T K L       + 
Sbjct: 490 GTQELLKYLRSRI---QDDTASPNEEPPVTAMTLPSESKINMHAITTLKLLEFSEKQAAV 546

Query: 372 IPSEIWEA---GEITKLDLSRNSIQELPPEL 399
           IP +++ A     +T ++ S+N +  +PP +
Sbjct: 547 IPDDMFNAVRSNPVTSVNFSKNQLTAIPPRI 577



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 157/339 (46%), Gaps = 54/339 (15%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L    N IE L  E+L++L  L+VL +  NK+  +P  I  L  L+ LD++ N I +
Sbjct: 399 LKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISR 458

Query: 106 IPDEIGSATALVKFDCSSNQLK------------------------------ELPSSLGR 135
           +P  +G+ + L       N L+                              E P     
Sbjct: 459 LPYTLGNLSQLKFLALEGNPLRAIRRDLLQKGTQELLKYLRSRIQDDTASPNEEPPVTAM 518

Query: 136 CLNLSDFKASNNCITSL-------------PEDLADCSK---MSKLDVEGNKLTVLSNNL 179
            L  S+ K + + IT+L             P+D+ +  +   ++ ++   N+LT +   +
Sbjct: 519 TLP-SESKINMHAITTLKLLEFSEKQAAVIPDDMFNAVRSNPVTSVNFSKNQLTAIPPRI 577

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           +     + ++    N ++ +   + +L +L  LD+  N + S+P  +     L    +  
Sbjct: 578 VELKDSVCDVNFGFNKISSVSLELCTLHKLTHLDIRNNVLTSLPEEMEALTRLQVINLSF 637

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDLSNNSLSGLPPEIG 295
           N     P+ L ++  L T+ L +NQ+    V+  QL+    L  LDL NN L  +PPE+G
Sbjct: 638 NRFKVFPSVLYRILTLETILLSNNQVGS--VDPLQLKKMEQLGTLDLQNNDLLQVPPELG 695

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
              TLR LLL GNP RT R++++   T A+L+YLRSR+P
Sbjct: 696 NCETLRTLLLEGNPFRTPRAAILAKGTAAVLEYLRSRIP 734



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 101/476 (21%), Positives = 189/476 (39%), Gaps = 120/476 (25%)

Query: 14  LNLSNRSLRDVPNEVYK---------NFDEAGE-GDKWWEAVDLQKLILAHNNIEKLKED 63
           L++S+  L+ +P E+ +           +E     D + + V L++L L++N++  +   
Sbjct: 265 LDVSHNKLKSIPEELLQLSHLKSLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPTS 324

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
              L  L  LN++ N+L  LPA I  +  LK LD + N +  +P E+ S  +L +     
Sbjct: 325 FALLINLVRLNLACNQLKNLPADISAMKSLKQLDCTKNYLETVPSELASMASLEQLYLRK 384

Query: 124 NQLKELPSSLGRCLNLSDFKA--------------------------------------- 144
           N+L+ LP  L  C  L +  A                                       
Sbjct: 385 NKLRSLPE-LPSCKLLKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLL 443

Query: 145 --------SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM---------LT 187
                   +NN I+ LP  L + S++  L +EGN L  +  +L+   T          + 
Sbjct: 444 QKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRAIRRDLLQKGTQELLKYLRSRIQ 503

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLH-----------QNRILSIPSSISGCCS---LA 233
           +  AS N     P T  +L    ++++H           + +   IP  +        + 
Sbjct: 504 DDTASPN--EEPPVTAMTLPSESKINMHAITTLKLLEFSEKQAAVIPDDMFNAVRSNPVT 561

Query: 234 EFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
                 N L+A+P  + +L   +  ++   N++    +E C L +L+ LD+ NN L+ LP
Sbjct: 562 SVNFSKNQLTAIPPRIVELKDSVCDVNFGFNKISSVSLELCTLHKLTHLDIRNNVLTSLP 621

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
            E+  +T L+ + L+ N  +   S L                              ++T+
Sbjct: 622 EEMEALTRLQVINLSFNRFKVFPSVLYR----------------------------ILTL 653

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            T L   ++  S++       P ++ +  ++  LDL  N + ++PPEL +C +L+ 
Sbjct: 654 ETILLSNNQVGSVD-------PLQLKKMEQLGTLDLQNNDLLQVPPELGNCETLRT 702



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 60/224 (26%)

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
           T LT+LI + N L  + E +  L  L  LD+H N++ S+PS+                  
Sbjct: 214 TDLTKLILASNQLQCLSEDVRLLPALSVLDVHDNQLTSLPSA------------------ 255

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 302
                LG+L  L  LD+  N+LK    E  QL  L  L L +N LS LP   G++ +L +
Sbjct: 256 -----LGQLENLQKLDVSHNKLKSIPEELLQLSHLKSLLLQHNELSHLPDGFGQLVSLEE 310

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L+ N L  + +S                               L+    RL++   +L
Sbjct: 311 LDLSNNHLTDIPTSFA-----------------------------LLINLVRLNLACNQL 341

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                    +P++I     + +LD ++N ++ +P EL+S ASL+
Sbjct: 342 K-------NLPADISAMKSLKQLDCTKNYLETVPSELASMASLE 378


>gi|410920716|ref|XP_003973829.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Takifugu
           rubripes]
          Length = 597

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 155/465 (33%), Positives = 239/465 (51%), Gaps = 78/465 (16%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +L AAR SG LNLS R L +VP  VY+ N D   EA      G+ D+WWE  DL KL+LA
Sbjct: 29  LLNAARKSGQLNLSGRGLIEVPQNVYRINCDVPEEAKQTVFSGDSDRWWEQTDLTKLLLA 88

Query: 54  HNNIEKLKEDLRNLPLLTVLN-----------------------VSHNKLSELPAAIGEL 90
            N + +L +D+R LP LTVL+                       +SHN+L+ LPA +  L
Sbjct: 89  SNQLTQLSDDIRLLPALTVLDLDDNQLSCLPEALQELQELQQLRLSHNQLTSLPAWVANL 148

Query: 91  HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCIT 150
             L SL + FN ++ +P+E+G   +L++ D S+NQLK+LP+++G    L     S+N ++
Sbjct: 149 KNLASLALQFNLLVSLPEELGHLKSLIELDLSNNQLKDLPANVGCLTCLQKLNLSHNKLS 208

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
            LP+ +   +K+  LD   N+LT                         +P ++  +S L 
Sbjct: 209 WLPDSIGQLTKVKMLDCSNNQLT------------------------EVPASLSQMSALE 244

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYC 269
           +L L  N++  +P+  S    L + Y GNN +  L P +L  L+ +  L+L  N+++   
Sbjct: 245 QLYLRHNKLDLLPNLKSPV--LKDLYFGNNQIEQLEPEQLSSLTAISVLELRDNKIRSLP 302

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
            E   L  L+ LDL+NN +S LP  +G ++ L+ +LL GNPLR LR  L+   T  LLKY
Sbjct: 303 EEITLLSSLTRLDLTNNDISSLPASLGLLSHLKVVLLEGNPLRGLRRDLLTKGTTELLKY 362

Query: 329 LRSRLPENEDSEASTTKE-DLITMATRLSV------TSKELSLEGMNLSAIPSEIWEAG- 380
           LR R+ E   S AS  +E   +T+ ++  V      T K L       +AIP E+++A  
Sbjct: 363 LRGRITE---SSASAAEEPTAMTLPSQAKVNFHNIQTLKMLQYSEKQTAAIPDEVFDAAV 419

Query: 381 --EITKLDLSRNSIQELPPEL----SSCASLQVKFSDLVTNKESC 419
              +T ++ S+N +  +PP L    SS + + + F+ L      C
Sbjct: 420 NQGVTAVNFSKNLLTSIPPRLLEFQSSLSDINLGFNRLAGCDPIC 464



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 158/336 (47%), Gaps = 51/336 (15%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L+ L   +N IE+L+ E L +L  ++VL +  NK+  LP  I  L  L  LD++ N I  
Sbjct: 264 LKDLYFGNNQIEQLEPEQLSSLTAISVLELRDNKIRSLPEEITLLSSLTRLDLTNNDISS 323

Query: 106 IPDEIG-------------------------SATALVKF------DCSSNQLKE-----L 129
           +P  +G                           T L+K+      + S++  +E     L
Sbjct: 324 LPASLGLLSHLKVVLLEGNPLRGLRRDLLTKGTTELLKYLRGRITESSASAAEEPTAMTL 383

Query: 130 PS----SLGRCLNLSDFKASNNCITSLPEDLADCS---KMSKLDVEGNKLTVLSNNLIAS 182
           PS    +      L   + S     ++P+++ D +    ++ ++   N LT +   L+  
Sbjct: 384 PSQAKVNFHNIQTLKMLQYSEKQTAAIPDEVFDAAVNQGVTAVNFSKNLLTSIPPRLLEF 443

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            + L+++    N L G  + I SL +L  +DL  N++  +P+ +     L    +  N  
Sbjct: 444 QSSLSDINLGFNRLAGC-DPICSLLQLTHIDLRNNQMAELPAEMKNLTKLRSIILNYNGF 502

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMT 298
            + P  L ++  L T+ L +NQ+    V+   L     LS LDLSNN L  +PPE+G  T
Sbjct: 503 KSFPGVLYQIVSLETILLGNNQVD--GVDPSHLMKLSHLSTLDLSNNDLLKIPPELGLCT 560

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +LR L L GNP R  R+++V   T A+++YLRSR+P
Sbjct: 561 SLRCLSLEGNPFRAPRAAIVAKGTDAVMEYLRSRIP 596



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 196/440 (44%), Gaps = 100/440 (22%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN  L+D+P  V                  LQKL L+HN +  L + +  L  + +L
Sbjct: 177 LDLSNNQLKDLPANV-------------GCLTCLQKLNLSHNKLSWLPDSIGQLTKVKML 223

Query: 74  NVSHNKLSELPAAIGELHMLKSL-------------------DVSF--NSIMKI-PDEIG 111
           + S+N+L+E+PA++ ++  L+ L                   D+ F  N I ++ P+++ 
Sbjct: 224 DCSNNQLTEVPASLSQMSALEQLYLRHNKLDLLPNLKSPVLKDLYFGNNQIEQLEPEQLS 283

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           S TA+   +   N+++ LP  +    +L+    +NN I+SLP  L   S +  + +EGN 
Sbjct: 284 SLTAISVLELRDNKIRSLPEEITLLSSLTRLDLTNNDISSLPASLGLLSHLKVVLLEGNP 343

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPE---------TIGSLSRLIRLDLHQNRIL-- 220
           L  L  +L+   T  TEL+  K L   + E         T  +L    +++ H  + L  
Sbjct: 344 LRGLRRDLLTKGT--TELL--KYLRGRITESSASAAEEPTAMTLPSQAKVNFHNIQTLKM 399

Query: 221 ---------SIPSSISGCC---SLAEFYMGNNALSALPAELGKL-SKLGTLDLHSNQLKE 267
                    +IP  +        +       N L+++P  L +  S L  ++L  N+L  
Sbjct: 400 LQYSEKQTAAIPDEVFDAAVNQGVTAVNFSKNLLTSIPPRLLEFQSSLSDINLGFNRLAG 459

Query: 268 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
            C   C L +L+ +DL NN ++ LP E+  +T LR ++L  N  ++          P +L
Sbjct: 460 -CDPICSLLQLTHIDLRNNQMAELPAEMKNLTKLRSIILNYNGFKSF---------PGVL 509

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                                ++++ T L   ++   ++G++    PS + +   ++ LD
Sbjct: 510 Y-------------------QIVSLETILLGNNQ---VDGVD----PSHLMKLSHLSTLD 543

Query: 387 LSRNSIQELPPELSSCASLQ 406
           LS N + ++PPEL  C SL+
Sbjct: 544 LSNNDLLKIPPELGLCTSLR 563


>gi|426329995|ref|XP_004026013.1| PREDICTED: leucine-rich repeat-containing protein 40 [Gorilla
           gorilla gorilla]
          Length = 602

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 155/439 (35%), Positives = 237/439 (53%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKTLPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLWRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  +++  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREILSKGTQEVLKYLRSKIKDDGPSQSESATETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   DL  NK S IS
Sbjct: 448 KEM-VSDVDLSFNKLSFIS 465



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 154/335 (45%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREILSKGTQEVLKYLRSKIKDDGPSQSESATETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMKSLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L  +  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYHIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 109/477 (22%), Positives = 192/477 (40%), Gaps = 115/477 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L L++N++  +   
Sbjct: 133 LNVSHNKLKTLPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNELKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLWR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +++  T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREILSKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESATETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSVN 431

Query: 237 MGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++   +DL  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L ++                    T+ T 
Sbjct: 492 KSLVRLQTINLSFNRFKML---------PEVLYHI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+    D
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLD 573


>gi|432853398|ref|XP_004067687.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Oryzias
           latipes]
          Length = 595

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 146/428 (34%), Positives = 222/428 (51%), Gaps = 22/428 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEA------GEGDKWWEAVDLQKLILAHNNI 57
           +LKAAR SG LNLS R+L  VP  VY+  +EA      G  D+WWE  DL KL+L+ N I
Sbjct: 30  LLKAARKSGQLNLSGRALTKVPQSVYRVNEEAQQNVSFGASDRWWEQTDLTKLLLSSNQI 89

Query: 58  EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV 117
            ++ ED+R LP L  L++  N+L+ L +AIGEL  L++L +S N +  +P E+     L 
Sbjct: 90  SQISEDIRLLPALVTLDLHDNQLNTLHSAIGELQELQTLRLSHNQLSSLPVEVCMLRNLR 149

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
                 N L+ LP   G+  NL++   S N +T LP+ L   + + K+ +  NKL+ L +
Sbjct: 150 SLTLQQNLLENLPEEFGQLENLTELDLSKNRLTDLPQSLGRLTGLQKISLSHNKLSCLPD 209

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
            L +  T +  L  S N L+ +P ++  +  L +L L  NR+  +P       +L E Y+
Sbjct: 210 CL-SQLTNVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRLQRLPQ--LHAPALKELYV 266

Query: 238 GNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           GNN +  L AE L  L  +  L+L  N+++    +   L  L+ LDL+NN +  LP  + 
Sbjct: 267 GNNQVGVLEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDLTNNDIGSLPASLS 326

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
            +  L+ LL+ GNPLR +R  L+   T  LLKYLR R+ E  +S              R+
Sbjct: 327 LLPNLKVLLVEGNPLRGIRRDLLTKGTNELLKYLRGRVKEEPESSEDPPTAMTFPSQARI 386

Query: 356 SVTSKE----LSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPEL----SSCAS 404
           +V S +    L    M + +IP E + A E   +   + S+N +  +P  L    SS   
Sbjct: 387 NVHSIKTLGVLDQSDMQVDSIPDEAFLAAEGQNVVTANFSKNKLTSIPARLLQLSSSLTE 446

Query: 405 LQVKFSDL 412
           L + F+ L
Sbjct: 447 LNLGFNQL 454



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 158/336 (47%), Gaps = 32/336 (9%)

Query: 27  EVYKNFDEAG--EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP 84
           E+Y   ++ G  E ++      +  L L  N I  + E +  L  LT L++++N +  LP
Sbjct: 263 ELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDLTNNDIGSLP 322

Query: 85  AAIGELHMLKSLDVSFNSIMKIPDEI--GSATALVKFDCSSNQLKELPSS---------- 132
           A++  L  LK L V  N +  I  ++       L+K+     ++KE P S          
Sbjct: 323 ASLSLLPNLKVLLVEGNPLRGIRRDLLTKGTNELLKY--LRGRVKEEPESSEDPPTAMTF 380

Query: 133 -------LGRCLNLSDFKASNNCITSLPEDL---ADCSKMSKLDVEGNKLTVLSNNLIAS 182
                  +     L     S+  + S+P++    A+   +   +   NKLT +   L+  
Sbjct: 381 PSQARINVHSIKTLGVLDQSDMQVDSIPDEAFLAAEGQNVVTANFSKNKLTSIPARLLQL 440

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            + LTEL    N L+     +  L +L  LDL  N++  +P+ +     L    +  N  
Sbjct: 441 SSSLTELNLGFNQLDHCGVEVCRLLQLTHLDLRNNQLKDLPADMENLAKLRCIILSYNRF 500

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMT 298
            + P  L ++  + T+ + +NQ+    V+  +L     LS LDLSNN L  +PPE+G  T
Sbjct: 501 KSFPEVLYQMFSMETVLMANNQVS--SVDPARLARLEHLSTLDLSNNDLLSIPPELGLCT 558

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +LR L L GNP RT R+++V   T A+L+YLRSR+P
Sbjct: 559 SLRSLSLQGNPFRTPRAAIVAKGTDAVLEYLRSRIP 594



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 174/405 (42%), Gaps = 82/405 (20%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQK+ L+HN +  L + L  L  + +L+ S+N+LS++PA++  +  L+ L +  N + ++
Sbjct: 194 LQKISLSHNKLSCLPDCLSQLTNVKLLDCSNNQLSDVPASLAHMLSLEQLHLRHNRLQRL 253

Query: 107 P----------------------DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKA 144
           P                      +++    A+   +   N+++ +P  +     L+    
Sbjct: 254 PQLHAPALKELYVGNNQVGVLEAEQLECLKAISVLELRDNKIRAVPEQMSLLHTLTRLDL 313

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS-KNLLNGMPET- 202
           +NN I SLP  L+    +  L VEGN L  +  +L+   T   EL+   +  +   PE+ 
Sbjct: 314 TNNDIGSLPASLSLLPNLKVLLVEGNPLRGIRRDLLTKGT--NELLKYLRGRVKEEPESS 371

Query: 203 ----------------IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN---NALS 243
                           + S+  L  LD    ++ SIP               N   N L+
Sbjct: 372 EDPPTAMTFPSQARINVHSIKTLGVLDQSDMQVDSIPDEAFLAAEGQNVVTANFSKNKLT 431

Query: 244 ALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           ++PA L +LS  L  L+L  NQL    VE C+L +L+ LDL NN L  LP ++  +  LR
Sbjct: 432 SIPARLLQLSSSLTELNLGFNQLDHCGVEVCRLLQLTHLDLRNNQLKDLPADMENLAKLR 491

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            ++L+ N  ++          P +L                     + +M T L   ++ 
Sbjct: 492 CIILSYNRFKSF---------PEVLY-------------------QMFSMETVLMANNQV 523

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            S++       P+ +     ++ LDLS N +  +PPEL  C SL+
Sbjct: 524 SSVD-------PARLARLEHLSTLDLSNNDLLSIPPELGLCTSLR 561


>gi|386781944|ref|NP_001247952.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
 gi|355745366|gb|EHH49991.1| hypothetical protein EGM_00744 [Macaca fascicularis]
 gi|380814504|gb|AFE79126.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
 gi|383410331|gb|AFH28379.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
          Length = 602

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 154/439 (35%), Positives = 235/439 (53%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+A+ EL  L+ L+VS N +   P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E++ A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   +L  NK S IS
Sbjct: 448 KEM-VSDVNLSFNKLSFIS 465



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ +  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILIKGTAAILEYLRDRIP 601



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 109/477 (22%), Positives = 188/477 (39%), Gaps = 115/477 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+  P E+         Y   +E     + +E + +L+ L L++N +  +   
Sbjct: 133 LNVSHNKLKIFPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESAAETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSIN 431

Query: 237 MGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++   ++L  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+    D
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLD 573


>gi|75075434|sp|Q4R3P6.1|LRC40_MACFA RecName: Full=Leucine-rich repeat-containing protein 40
 gi|67971856|dbj|BAE02270.1| unnamed protein product [Macaca fascicularis]
          Length = 602

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 154/439 (35%), Positives = 235/439 (53%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+A+ EL  L+ L+VS N +   P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++ +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E++ A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   +L  NK S IS
Sbjct: 448 KEM-VSDVNLSFNKLSFIS 465



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             + ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ +  K   ++ ++   N+L  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILIKGTAAILEYLRDRIP 601



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 109/477 (22%), Positives = 188/477 (39%), Gaps = 115/477 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+  P E+         Y   +E     + +E + +L+ L L++N +  +   
Sbjct: 133 LNVSHNKLKIFPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPAS 192

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 193 FSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRR 252

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 253 NKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQ 312

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + SK   
Sbjct: 313 SLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKD 371

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G        ET  +L    R+++H    L I           P  +        +    
Sbjct: 372 DGPSQSESAAETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSIN 431

Query: 237 MGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++   ++L  N+L    +E C L +L+ LDL NN L+ LP E+
Sbjct: 432 FSKNQLCEIPKRMVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEM 491

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +                    T+ T 
Sbjct: 492 ESLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLETI 523

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+    D
Sbjct: 524 L-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLD 573


>gi|403257782|ref|XP_003921473.1| PREDICTED: leucine-rich repeat-containing protein 40 [Saimiri
           boliviensis boliviensis]
          Length = 615

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 154/439 (35%), Positives = 235/439 (53%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 44  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 103

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L++S N +  +P+EI + 
Sbjct: 104 NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKILPEEITNL 163

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  NL D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 164 RNLKCLYLQHNELICISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLK 223

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  +  +  L  L L +N++  +P     C  L 
Sbjct: 224 SLPAE-INRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLK 281

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L  L  LDLSNN +S LP
Sbjct: 282 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLHSLERLDLSNNDISSLP 341

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S+  +  E  +T+
Sbjct: 342 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQRDSATETAMTL 400

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   IT ++ S+N + E+P  +   
Sbjct: 401 PSESRVNIHAIITLKMLDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVEL 460

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + V   +L  NK S IS
Sbjct: 461 KEM-VSDVNLSFNKLSSIS 478



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 156/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  LH L+ LD+S N I  
Sbjct: 280 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLHSLERLDLSNNDISS 339

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             D ++     
Sbjct: 340 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQRDSATETAMT 399

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 400 LPSESRVNIHAIITLKMLDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVE 459

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 460 LKEMVSDVNLSFNKLSSISLELCMLQKLTFLDLRNNFLNSLPEEMELLVRLQTINLSFNR 519

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 520 FKMLPEVLYRIFTLETILISNNQVGSMDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 579

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 580 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 614



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 111/479 (23%), Positives = 188/479 (39%), Gaps = 119/479 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDE---AGEGDKWWEAVDLQKLILAHNNIEKLK 61
           LN+S+  L+ +P E+         Y   +E     EG  + +  +L+ L L++N +  + 
Sbjct: 146 LNISHNKLKILPEEITNLRNLKCLYLQHNELICISEG--FEQLSNLEDLDLSNNRLTTVP 203

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL----- 116
               +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L     
Sbjct: 204 ASFSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYL 263

Query: 117 ----VKF-------------------------------------DCSSNQLKELPSSLGR 135
               ++F                                     D   N+LK +P  +  
Sbjct: 264 RRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIIL 323

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKN 194
             +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + SK 
Sbjct: 324 LHSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI 382

Query: 195 LLNGMPE---------TIGSLSR--------LIRLDLHQNRILSIPSSISGCCS---LAE 234
             +G  +         T+ S SR        L  LD    +   IP  +        +  
Sbjct: 383 KDDGPSQRDSATETAMTLPSESRVNIHAIITLKMLDYSDKQATLIPDEVFDAVKSNIITS 442

Query: 235 FYMGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 292
                N L  +P  + +L ++   ++L  N+L    +E C L +L+ LDL NN L+ LP 
Sbjct: 443 VNFSKNQLCEIPKRMVELKEMVSDVNLSFNKLSSISLELCMLQKLTFLDLRNNFLNSLPE 502

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           E+  +  L+ + L+ N  + L         P +L  +                    T+ 
Sbjct: 503 EMELLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLE 534

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           T L   ++  S++       P ++     +T LDL  N + ++PPEL +C +L+    D
Sbjct: 535 TILISNNQVGSMD-------PQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLD 586


>gi|326428302|gb|EGD73872.1| leucine rich repeat containing protein 40 [Salpingoeca sp. ATCC
           50818]
          Length = 535

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 142/445 (31%), Positives = 239/445 (53%), Gaps = 33/445 (7%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK-----------NFDEAGEGDKWWEAVDLQKL 50
           D++L  AR SG LN+S R L  +P  V+            +FD     DKWWE+ DLQ+L
Sbjct: 13  DKLLANARKSGQLNISARGLEAIPQAVFHLHEIPPEQTSLSFDSE---DKWWESTDLQRL 69

Query: 51  ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI 110
           I+A N I ++ +D+  L  LT+L+  +N+L  +   +G L  LK+L+ + N +  IPD +
Sbjct: 70  IVASNEIREIPDDVELLGALTLLDAHNNQLERVSDKLGALQELKALNFAHNKLRAIPDGV 129

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
            +   L     + NQ++++   +G   +L +   + N + SLPE L   +++ +L +  N
Sbjct: 130 YALRHLKSLRLTGNQIQDVDERIGALTDLEELDLAENQLRSLPESLGRLAQLRRLALNKN 189

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
            L  L  + IA  +++TEL    N L  +P ++ +++ L RLDL  N++ ++P  +    
Sbjct: 190 NLQTLPQS-IAQLSLITELEIIHNSLTAVPLSLENMASLTRLDLRYNKLTALP-RLCNLK 247

Query: 231 SLAEFYMGNNALSALPAELGKL-SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           +L E  +G N+++ L      L S L  LD+  N+L++       L+ L  LD++NN L+
Sbjct: 248 ALRELSLGFNSITTLGDIRATLPSGLCILDVRDNKLRDLSPSIVHLQALERLDVTNNDLA 307

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE---------DS 339
            LPPE+G +  L+ ++L GNP+R+LR  ++   T  +LKYLRSR+ E +          S
Sbjct: 308 TLPPELGVLPKLKSIVLDGNPMRSLRRDIIARGTQGILKYLRSRMTEEQLAELTSGSVQS 367

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELP 396
           EAS  +++ +  A   +  + +LS + + L  +PS+  EA +   I+KL L +N +Q LP
Sbjct: 368 EASAQRQEAVAKAEMKASATLDLSEQKLQL--VPSKQLEAAQGAGISKLVLRKNLLQNLP 425

Query: 397 PELSSCASLQVKFSDLVTNKESCIS 421
                 AS   +  DL  NK   +S
Sbjct: 426 AGTDCLASTLTEL-DLGFNKIDTLS 449



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 135/292 (46%), Gaps = 30/292 (10%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           +L + HN++  +   L N+  LT L++ +NKL+ LP  +  L  L+ L + FNSI  + D
Sbjct: 206 ELEIIHNSLTAVPLSLENMASLTRLDLRYNKLTALPR-LCNLKALRELSLGFNSITTLGD 264

Query: 109 EIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
              +  + L   D   N+L++L  S+     L     +NN + +LP +L    K+  + +
Sbjct: 265 IRATLPSGLCILDVRDNKLRDLSPSIVHLQALERLDVTNNDLATLPPELGVLPKLKSIVL 324

Query: 168 EGNKLTVLSNNLIASWT----------MLTELIASKNLLNGMPETIGSLSRL-------- 209
           +GN +  L  ++IA  T          M  E +A   L +G  ++  S  R         
Sbjct: 325 DGNPMRSLRRDIIARGTQGILKYLRSRMTEEQLAE--LTSGSVQSEASAQRQEAVAKAEM 382

Query: 210 ---IRLDLHQNRILSIPSS---ISGCCSLAEFYMGNNALSALPAELGKL-SKLGTLDLHS 262
                LDL + ++  +PS     +    +++  +  N L  LPA    L S L  LDL  
Sbjct: 383 KASATLDLSEQKLQLVPSKQLEAAQGAGISKLVLRKNLLQNLPAGTDCLASTLTELDLGF 442

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N++         L  L+VLDL  N L+ LP E+  + +LR L+L+ N  R L
Sbjct: 443 NKIDTLSPSIALLGNLTVLDLQGNQLTSLPSELISLASLRDLILSFNRFRQL 494



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 98/247 (39%), Gaps = 47/247 (19%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPL-LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L L  N+I  L +    LP  L +L+V  NKL +L  +I  L  L+ LDV+ N +  
Sbjct: 249 LRELSLGFNSITTLGDIRATLPSGLCILDVRDNKLRDLSPSIVHLQALERLDVTNNDLAT 308

Query: 106 IPDEIG-------------------------SATALVKF---DCSSNQLKELPS------ 131
           +P E+G                             ++K+     +  QL EL S      
Sbjct: 309 LPPELGVLPKLKSIVLDGNPMRSLRRDIIARGTQGILKYLRSRMTEEQLAELTSGSVQSE 368

Query: 132 ---SLGRCLNLSDFKASN---------NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
                   +  ++ KAS            + S   + A  + +SKL +  N L  L    
Sbjct: 369 ASAQRQEAVAKAEMKASATLDLSEQKLQLVPSKQLEAAQGAGISKLVLRKNLLQNLPAGT 428

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
               + LTEL    N ++ +  +I  L  L  LDL  N++ S+PS +    SL +  +  
Sbjct: 429 DCLASTLTELDLGFNKIDTLSPSIALLGNLTVLDLQGNQLTSLPSELISLASLRDLILSF 488

Query: 240 NALSALP 246
           N    LP
Sbjct: 489 NRFRQLP 495



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 48/119 (40%), Gaps = 1/119 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           ++ L +  N L  LPA    L   L  LD+ FN I  +   I     L   D   NQL  
Sbjct: 411 ISKLVLRKNLLQNLPAGTDCLASTLTELDLGFNKIDTLSPSIALLGNLTVLDLQGNQLTS 470

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           LPS L    +L D   S N    LPE + D   +  L V  N +  L  + +    ML 
Sbjct: 471 LPSELISLASLRDLILSFNRFRQLPECVYDLLALENLVVNDNAIDTLDPHGLTRMPMLA 529



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 100/254 (39%), Gaps = 51/254 (20%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI---- 110
           N +  L   + +L  L  L+V++N L+ LP  +G L  LKS+ +  N +  +  +I    
Sbjct: 281 NKLRDLSPSIVHLQALERLDVTNNDLATLPPELGVLPKLKSIVLDGNPMRSLRRDIIARG 340

Query: 111 ----------------------GSAT-----------------ALVKFDCSSNQLKELPS 131
                                 GS                   A    D S  +L+ +PS
Sbjct: 341 TQGILKYLRSRMTEEQLAELTSGSVQSEASAQRQEAVAKAEMKASATLDLSEQKLQLVPS 400

Query: 132 S---LGRCLNLSDFKASNNCITSLPEDLADC--SKMSKLDVEGNKLTVLSNNLIASWTML 186
                 +   +S      N + +LP    DC  S +++LD+  NK+  LS + IA    L
Sbjct: 401 KQLEAAQGAGISKLVLRKNLLQNLPAG-TDCLASTLTELDLGFNKIDTLSPS-IALLGNL 458

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL- 245
           T L    N L  +P  + SL+ L  L L  NR   +P  +    +L    + +NA+  L 
Sbjct: 459 TVLDLQGNQLTSLPSELISLASLRDLILSFNRFRQLPECVYDLLALENLVVNDNAIDTLD 518

Query: 246 PAELGKLSKLGTLD 259
           P  L ++  L  LD
Sbjct: 519 PHGLTRMPMLACLD 532


>gi|159464078|ref|XP_001690269.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158284257|gb|EDP10007.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 523

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/317 (39%), Positives = 188/317 (59%), Gaps = 6/317 (1%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDE--AGEGDKWWEAVDLQKLILAHNNIEKL 60
           + + +AR+SG+L L+ R L  VP+ VY N +E   G   KWWE  ++ K+ L+ N I  L
Sbjct: 11  KAIVSARSSGTLTLTGRGLTQVPSAVY-NLEEQLPGHDAKWWEVAEMYKVDLSRNAITSL 69

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
             +L  L  LT L+VSHN+L+ LP  +  L  LK LDVS N I ++P  + +  AL    
Sbjct: 70  PPELGVLTTLTHLDVSHNQLAALPETLSMLVGLKLLDVSNNRIEELPASLAALPALAALH 129

Query: 121 CSSNQLKELPSSLG--RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
              N L  LP  +G  +   L+   A +N +  LP  L++ + ++KLD+ GN L  L   
Sbjct: 130 AGKNALSLLPPGVGGRQQPALALLSAPDNRLVELPPGLSEAASLTKLDLSGNALAELPGY 189

Query: 179 LIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
           ++   + LT++  S+N L G +   +G L R+  L+L  NR+ S+P +++GC  L E ++
Sbjct: 190 ILPGLSSLTDVDLSRNRLRGELGREVGLLRRVRTLNLRDNRLTSLPPTVAGCSGLVELFL 249

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKM 297
           G N LS++P ELG  + L TL+L  N+L     E C+L+L +LDLSNN L  LPPE+G M
Sbjct: 250 GRNQLSSVPPELGMCAGLRTLELRDNKLTGIPAELCELQLGLLDLSNNDLRSLPPELGSM 309

Query: 298 TTLRKLLLTGNPLRTLR 314
           ++LR L L GNPL+++R
Sbjct: 310 SSLRSLPLDGNPLKSIR 326



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 156/354 (44%), Gaps = 62/354 (17%)

Query: 43  EAVDLQKLILAHNNIEKLKED-LRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSF 100
           EA  L KL L+ N + +L    L  L  LT +++S N+L  EL   +G L  +++L++  
Sbjct: 169 EAASLTKLDLSGNALAELPGYILPGLSSLTDVDLSRNRLRGELGREVGLLRRVRTLNLRD 228

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC----------------------LN 138
           N +  +P  +   + LV+     NQL  +P  LG C                      L 
Sbjct: 229 NRLTSLPPTVAGCSGLVELFLGRNQLSSVPPELGMCAGLRTLELRDNKLTGIPAELCELQ 288

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-IASWTMLTELIASKNL-L 196
           L     SNN + SLP +L   S +  L ++GN L  +   + +     L  L   + L L
Sbjct: 289 LGLLDLSNNDLRSLPPELGSMSSLRSLPLDGNPLKSIRREVPLLPPEGLARLPGLRGLHL 348

Query: 197 NGM-------PETIGSLSRLIRLDLHQNRIL-SIP---------------SSISGCCSLA 233
           N M       P   G L  L  L +  N  L  +P               + I G C+L 
Sbjct: 349 NAMGLSAWPLPALNGVLPNLHELQVCNNPPLRQLPPYPFMACPNLVRLELAGIPGVCTLP 408

Query: 234 E-----------FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLD 281
                         +    +   P EL +  +L  L+L SN+L+    E A   RL  L+
Sbjct: 409 PGTFAVLTALEALDLSQTGIGIFPPELLQAPRLRLLNLASNRLEVLPAEVAAMARLEELN 468

Query: 282 LSNNSLSGLPPEIGKMT-TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L+NN+L+ LPP++G +   LR L L GNPLR++R  ++   TPA+L YL+ R+P
Sbjct: 469 LANNNLATLPPQLGLLAPVLRSLGLEGNPLRSIRRPILERGTPAVLAYLKDRIP 522



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 112/255 (43%), Gaps = 44/255 (17%)

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           + ++M K+D+  N +T L   L    T LT L  S N L  +PET+  L  L  LD+  N
Sbjct: 52  EVAEMYKVDLSRNAITSLPPEL-GVLTTLTHLDVSHNQLAALPETLSMLVGLKLLDVSNN 110

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL 277
           RI  +P+S++   +LA  + G NALS LP  +G                       Q  L
Sbjct: 111 RIEELPASLAALPALAALHAGKNALSLLPPGVGGRQ--------------------QPAL 150

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL------RS 331
           ++L   +N L  LPP + +  +L KL L+GN L  L   ++ G     L  L      R+
Sbjct: 151 ALLSAPDNRLVELPPGLSEAASLTKLDLSGNALAELPGYILPG-----LSSLTDVDLSRN 205

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
           RL      E    +              + L+L    L+++P  +     + +L L RN 
Sbjct: 206 RLRGELGREVGLLRR------------VRTLNLRDNRLTSLPPTVAGCSGLVELFLGRNQ 253

Query: 392 IQELPPELSSCASLQ 406
           +  +PPEL  CA L+
Sbjct: 254 LSSVPPELGMCAGLR 268



 Score = 42.0 bits (97), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 14/62 (22%)

Query: 358 TSKELSLEGMNLSAIPSEI--------------WEAGEITKLDLSRNSIQELPPELSSCA 403
           +S  L+L G  L+ +PS +              WE  E+ K+DLSRN+I  LPPEL    
Sbjct: 18  SSGTLTLTGRGLTQVPSAVYNLEEQLPGHDAKWWEVAEMYKVDLSRNAITSLPPELGVLT 77

Query: 404 SL 405
           +L
Sbjct: 78  TL 79


>gi|296208241|ref|XP_002750998.1| PREDICTED: leucine-rich repeat-containing protein 40 [Callithrix
           jacchus]
          Length = 602

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 155/441 (35%), Positives = 237/441 (53%), Gaps = 29/441 (6%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLSFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L++S N +  +P+EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKILPEEITNL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  +L D   SNN +T++P   +  S + +L++  N+L 
Sbjct: 151 RNLKCLYLQHNELICISEGFEQLSSLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I     L  L  + NLL  +P  + ++  L  L L +N++  +P     C  L 
Sbjct: 211 SLPAE-INRMKRLKHLDCNSNLLETIPPELAAMESLELLYLRRNKLRFLP-EFPSCSLLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L  L+ +  LDL  N+LK    E   L  L  LDLSNN +S LP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLHSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++N  T  +LKYL+S++ ++  S+  +  E  +T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLQSKIKDDGPSQRDSATETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP E+++A +   IT ++ S+N I E+P  +   
Sbjct: 388 PSESRVNIHAIITLKMLDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQICEIPKRM--- 444

Query: 403 ASLQVKFSD--LVTNKESCIS 421
             L+   SD  L  NK S IS
Sbjct: 445 VELKETVSDVNLSFNKLSSIS 465



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L+ E L++L  + VL++  NKL  +P  I  LH L+ LD+S N I  
Sbjct: 267 LKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLHSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             D ++     
Sbjct: 327 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLQSKIKDDGPSQRDSATETAMT 386

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N++  +   ++ 
Sbjct: 387 LPSESRVNIHAIITLKMLDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQICEIPKRMVE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               ++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 447 LKETVSDVNLSFNKLSSISLELCMLQKLTFLDLRNNFLNSLPEEMELLVRLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++  L T+ + +NQ+     +  ++   L+ LDL NN L  +PPE+G    
Sbjct: 507 FKMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVN 566

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 567 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 601



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 110/479 (22%), Positives = 189/479 (39%), Gaps = 119/479 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDE---AGEGDKWWEAVDLQKLILAHNNIEKLK 61
           LN+S+  L+ +P E+         Y   +E     EG  + +   L+ L L++N +  + 
Sbjct: 133 LNISHNKLKILPEEITNLRNLKCLYLQHNELICISEG--FEQLSSLEDLDLSNNRLTTVP 190

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL----- 116
               +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+ +  +L     
Sbjct: 191 ASFSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAAMESLELLYL 250

Query: 117 ----VKF-------------------------------------DCSSNQLKELPSSLGR 135
               ++F                                     D   N+LK +P  +  
Sbjct: 251 RRNKLRFLPEFPSCSLLKELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIIL 310

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKN 194
             +L     SNN I+SLP  L +   +  L +EGN L  +   +I   T  + + + SK 
Sbjct: 311 LHSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLQSKI 369

Query: 195 LLNGMPE---------TIGSLSR--------LIRLDLHQNRILSIPSSISGCCS---LAE 234
             +G  +         T+ S SR        L  LD    +   IP  +        +  
Sbjct: 370 KDDGPSQRDSATETAMTLPSESRVNIHAIITLKMLDYSDKQATLIPDEVFDAVKSNIITS 429

Query: 235 FYMGNNALSALPAELGKLSK-LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 292
                N +  +P  + +L + +  ++L  N+L    +E C L +L+ LDL NN L+ LP 
Sbjct: 430 VNFSKNQICEIPKRMVELKETVSDVNLSFNKLSSISLELCMLQKLTFLDLRNNFLNSLPE 489

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           E+  +  L+ + L+ N  + L         P +L  +                    T+ 
Sbjct: 490 EMELLVRLQTINLSFNRFKML---------PEVLYRI-------------------FTLE 521

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           T L +++ ++       S  P ++     +T LDL  N + ++PPEL +C +L+    D
Sbjct: 522 TIL-ISNNQVG------SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLD 573


>gi|432116060|gb|ELK37190.1| Leucine-rich repeat-containing protein 40 [Myotis davidii]
          Length = 561

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 139/410 (33%), Positives = 224/410 (54%), Gaps = 16/410 (3%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           D+P E  +N   +   ++WWE  DL KLI+++N ++ L +DLR LP LTVL++  N+L+ 
Sbjct: 20  DIPEEANQNLSFSA-TERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTS 78

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP+AI EL  L+ L+VS N +  +P+EI +   L       N+L  +P    +  NL D 
Sbjct: 79  LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTSIPEGFEQLFNLEDL 138

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNNC+T++P   +  S + +L++  N+L  L    I+    L  L  + NLL  +P  
Sbjct: 139 DISNNCLTTVPASFSSLSSLVRLNLSSNQLKNLPAE-ISGMKRLKHLDCNSNLLESIPSE 197

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLH 261
           +  +  L  L L +N++  +P     C  L E ++G N +  L AE L  L+ +  LDL 
Sbjct: 198 LAGMESLELLYLRRNKLRFLP-EFPSCKLLKELHLGENQIEMLGAEHLKHLNSILVLDLR 256

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+LK    E   L+ L  LDLSNN +S LP  +GK+  L+ L L GNP+RT+R  ++N 
Sbjct: 257 DNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGKL-HLKFLALEGNPMRTIRREIINK 315

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMA--TRLSV----TSKELSLEGMNLSAIPS 374
            T  +LKYLRS++ ++   ++ +  E  +T+   +R++V    T K L       + IP 
Sbjct: 316 GTQEVLKYLRSKIKDDGPRQSDSVIETAMTLPSESRVNVHAIITLKILDYSDKQTTLIPD 375

Query: 375 EIWEAGE---ITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCIS 421
           E+++A +   +T ++ S+N + E+P  +     + V   +L  NK S IS
Sbjct: 376 EVFDAVKSNIVTSINFSKNQLCEIPKRIIELKEM-VSDVNLGFNKLSLIS 424



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 150/335 (44%), Gaps = 47/335 (14%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L L  N IE L  E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 226 LKELHLGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISS 285

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G                            ++K+             D        
Sbjct: 286 LPYSLGKLHLKFLALEGNPMRTIRREIINKGTQEVLKYLRSKIKDDGPRQSDSVIETAMT 345

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   +I 
Sbjct: 346 LPSESRVNVHAIITLKILDYSDKQTTLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRIIE 405

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++    N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 406 LKEMVSDVNLGFNKLSLISLELCMLQKLSFLDLRNNFLNSLPEEMESLIRLQTINLSFNR 465

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTT 299
              LP  L ++S L T+ + +NQ+     E  ++   L  LDL NN L  +PPE+G    
Sbjct: 466 FKILPEVLYRISTLETILISNNQVGSVNPEKLKIMENLVTLDLQNNDLLQIPPELGNCVN 525

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 526 LRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 560



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 109/477 (22%), Positives = 187/477 (39%), Gaps = 115/477 (24%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           LN+S+  L+ +P E+         Y   +E     + +E + +L+ L +++N +  +   
Sbjct: 92  LNVSHNKLKILPEEITNLRNLKGLYLQHNELTSIPEGFEQLFNLEDLDISNNCLTTVPAS 151

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL------- 116
             +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+    +L       
Sbjct: 152 FSSLSSLVRLNLSSNQLKNLPAEISGMKRLKHLDCNSNLLESIPSELAGMESLELLYLRR 211

Query: 117 --VKF-------------------------------------DCSSNQLKELPSSLGRCL 137
             ++F                                     D   N+LK +P  +    
Sbjct: 212 NKLRFLPEFPSCKLLKELHLGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQ 271

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLL 196
           +L     SNN I+SLP  L     +  L +EGN +  +   +I   T  + + + SK   
Sbjct: 272 SLERLDLSNNDISSLPYSLGKL-HLKFLALEGNPMRTIRREIINKGTQEVLKYLRSKIKD 330

Query: 197 NG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS---LAEFY 236
           +G      + ET  +L    R+++H    L I           P  +        +    
Sbjct: 331 DGPRQSDSVIETAMTLPSESRVNVHAIITLKILDYSDKQTTLIPDEVFDAVKSNIVTSIN 390

Query: 237 MGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
              N L  +P  + +L ++   ++L  N+L    +E C L +LS LDL NN L+ LP E+
Sbjct: 391 FSKNQLCEIPKRIIELKEMVSDVNLGFNKLSLISLELCMLQKLSFLDLRNNFLNSLPEEM 450

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             +  L+ + L+ N  + L         P +L  +            ST +  LI+    
Sbjct: 451 ESLIRLQTINLSFNRFKIL---------PEVLYRI------------STLETILISNNQV 489

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
            SV  ++L +                 +  LDL  N + ++PPEL +C +L+    D
Sbjct: 490 GSVNPEKLKI--------------MENLVTLDLQNNDLLQIPPELGNCVNLRTLLLD 532


>gi|149026333|gb|EDL82576.1| similar to hypothetical protein FLJ20331, isoform CRA_b [Rattus
           norvegicus]
          Length = 602

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 151/439 (34%), Positives = 237/439 (53%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR+SG LNL+ R+L +VP  V++ N D   EA +       ++WWE  DL KLI++
Sbjct: 31  LLKAARSSGQLNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI S 
Sbjct: 91  SNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKMLPEEITSL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P       +L D   S+N + ++P D A  S + +L++  N+L 
Sbjct: 151 KNLKALHLQHNELTCIPEGFEHLSSLEDLDLSSNRLATVPADFALLSNLLRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L 
Sbjct: 211 NLPAE-ISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLP-EFPSCRQLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E Y+  N +  L AE L  L  +  LDL SN+L+    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELYLAENQIEKLGAEHLQHLQAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+
Sbjct: 329 CSLGNL-HLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTL 387

Query: 352 ATRLS------VTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +         VT K L       + IP +I++A +   +T ++ S+N + E+P  ++  
Sbjct: 388 PSEARVNIHAIVTLKLLDYSDKQATLIPDDIFDATKNTVVTSINFSKNQLCEIPQRIAEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + +   +L  NK S +S
Sbjct: 448 KEMVLDV-NLSFNKLSLVS 465



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 158/337 (46%), Gaps = 51/337 (15%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L LA N IEKL  E L++L  + VL++  NKL  +P  +  L  L+ LD+S N I  
Sbjct: 267 LKELYLAENQIEKLGAEHLQHLQAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF------DCSSNQLKELPSS--- 132
           +P  +G+                           ++K+      D  +NQ   +P +   
Sbjct: 327 LPCSLGNLHLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMT 386

Query: 133 --------LGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
                   +   + L     S+   T +P+D+ D +K   ++ ++   N+L  +   +  
Sbjct: 387 LPSEARVNIHAIVTLKLLDYSDKQATLIPDDIFDATKNTVVTSINFSKNQLCEIPQRIAE 446

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M+ ++  S N L+ +   +  L +L  LDL  N + S+P  +S    L    +  N 
Sbjct: 447 LKEMVLDVNLSFNKLSLVSHELCLLQKLAFLDLRNNFLSSLPEEMSSLTKLQTINLSFNR 506

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL----SVLDLSNNSLSGLPPEIGKM 297
               PA L  +S L T+ + +NQ+    V+  +++L    S LDL NN L  +PPE+G  
Sbjct: 507 FKVFPAVLYHISTLETILISNNQVG--SVDPLKMKLMENLSTLDLQNNDLLQIPPELGNC 564

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 565 VQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 163/381 (42%), Gaps = 61/381 (16%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-PDEIGSA 113
           N +E +  D+ ++  L +L +  NKL  LP        LK L ++ N I K+  + +   
Sbjct: 230 NLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELYLAENQIEKLGAEHLQHL 288

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            A++  D  SN+L+ +P  +    +L     SNN I+SLP  L +   +  L +EGN L 
Sbjct: 289 QAILVLDLRSNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLR 347

Query: 174 VLSNNLIASWTM-LTELIASK------NLLNGMPETIGSLSRLIRLDLHQNRILS----- 221
            +   +IA  T  + + + SK      N  + +PET  +L    R+++H    L      
Sbjct: 348 TIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIVTLKLLDYS 407

Query: 222 ------IPSSISGCCS---LAEFYMGNNALSALPAELGKLSKLG-TLDLHSNQLKEYCVE 271
                 IP  I        +       N L  +P  + +L ++   ++L  N+L     E
Sbjct: 408 DKQATLIPDDIFDATKNTVVTSINFSKNQLCEIPQRIAELKEMVLDVNLSFNKLSLVSHE 467

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            C L +L+ LDL NN LS LP E+  +T L+ + L+ N  +           PA+L ++ 
Sbjct: 468 LCLLQKLAFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVF---------PAVLYHI- 517

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                      ST +  LI+     SV   ++ L                 ++ LDL  N
Sbjct: 518 -----------STLETILISNNQVGSVDPLKMKL--------------MENLSTLDLQNN 552

Query: 391 SIQELPPELSSCASLQVKFSD 411
            + ++PPEL +C  L+    D
Sbjct: 553 DLLQIPPELGNCVQLRTLLLD 573


>gi|384249477|gb|EIE22958.1| L domain-like protein [Coccomyxa subellipsoidea C-169]
          Length = 521

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/337 (40%), Positives = 200/337 (59%), Gaps = 8/337 (2%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           +  N+L ELPA I  L  LK L VS N + K+PD +    +L   +C+ N L  LP++LG
Sbjct: 10  IHQNELEELPAHIAALTSLKRLAVSGNRLSKLPDTVAEIHSLRHLECAGNALAVLPAALG 69

Query: 135 -RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +  +L    AS+N +T LP   A  + +  L+V  N+L+ +   ++     LT L  S+
Sbjct: 70  SQQPHLQHVDASDNALTQLPGGFAAAAGLLTLNVSSNRLSSVPAGMLCGLRSLTSLNLSQ 129

Query: 194 NLLNG-MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           NL+ G +PE I  LSRL  LD+ +N++ ++P  + GC +L E ++G N +  LP  L +L
Sbjct: 130 NLIGGCLPEDISCLSRLSLLDVSRNKMTALPDGLGGCSALVELFLGYNDIEQLPPTLSQL 189

Query: 253 SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           S L TL+L  N L+ +   AC L L++LDL++N LS LPPE+G+MTTLR L ++GNP+R 
Sbjct: 190 SALRTLELRGNMLRSFPAAACSLTLTLLDLTDNDLSTLPPELGRMTTLRALPVSGNPIRG 249

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           LR+   N P  +LL  L +RL E E  EA T        A R++  S  ++L G  L+ +
Sbjct: 250 LRT---NQPLSSLLTSLHNRL-EEEPQEAETAAASARAAAPRIAPRSAAVNLSGQQLTCV 305

Query: 373 PSEIWE-AGEITKLDLSRNSIQELPPE-LSSCASLQV 407
           P+E+W+ A  +T LDLS N + EL  E L+ CA L+V
Sbjct: 306 PAELWDSAACLTHLDLSNNQLSELLAERLAGCAQLKV 342



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 152/364 (41%), Gaps = 86/364 (23%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA-------------------- 86
           L +L L +N+IE+L   L  L  L  L +  N L   PAA                    
Sbjct: 169 LVELFLGYNDIEQLPPTLSQLSALRTLELRGNMLRSFPAAACSLTLTLLDLTDNDLSTLP 228

Query: 87  --IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS------------- 131
             +G +  L++L VS N I  +      ++ L       N+L+E P              
Sbjct: 229 PELGRMTTLRALPVSGNPIRGLRTNQPLSSLLTSLH---NRLEEEPQEAETAAASARAAA 285

Query: 132 ----SLGRCLNLSDFKASNNCITSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASWTML 186
                    +NLS  +     +T +P +L D +  ++ LD+  N+L+ L    +A    L
Sbjct: 286 PRIAPRSAAVNLSGQQ-----LTCVPAELWDSAACLTHLDLSNNQLSELLAERLAGCAQL 340

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNR-ILSIPSSISGCCSLAEFYMGNNALSAL 245
             L  S+N L   P     L  L +LDL  N  I +I +    CC+++  ++    LS +
Sbjct: 341 KVLNLSRNRLTDWPLPRNVLPLLTQLDLSANPGICAISAGAFDCCAVSLQHLD---LSGV 397

Query: 246 PAELG-------KLSKLGTL-------------------------DLHSNQLKEYCVEAC 273
           PA  G        L KL TL                         D+ SNQ+ +      
Sbjct: 398 PAAGGIANTMLVSLPKLATLKLAQCRLSSFPALPPAPGGDSLRVIDVSSNQISQVPEAIS 457

Query: 274 QLR-LSVLDLSNNSLSGLPPEIGKMTT-LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            LR L  L LSNN LSGLPP++G +   L  L L GNPLR++R  ++   T A+L+YLR 
Sbjct: 458 ALRALEELCLSNNELSGLPPKLGLLAPKLHVLALEGNPLRSIRRPILERGTQAVLEYLRG 517

Query: 332 RLPE 335
           R+ E
Sbjct: 518 RIVE 521


>gi|198426338|ref|XP_002124802.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 598

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 156/464 (33%), Positives = 237/464 (51%), Gaps = 53/464 (11%)

Query: 2   DRILKAARTSGSLNLSNR----------SLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLI 51
           D  L  AR SG+LNLSN           SL   P +   +FD+      WW+ V+L KL 
Sbjct: 27  DAKLNQARKSGTLNLSNNQWDVLPSNVWSLNKAPTKEAASFDDGNSA--WWDQVELTKLN 84

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N +  L EDL++   L  L+V  NKL  LP AIG L  L+ L++S N +  I     
Sbjct: 85  LSSNLLCSLPEDLQSFEFLKFLDVHDNKLQALPNAIGNLSALEHLNLSHNQLSIIQTSFN 144

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L       N+L+ELPSSLGR  N      S+N IT+LPED+     +   +   N+
Sbjct: 145 GLVNLRVLLLQHNRLRELPSSLGRLQNCEKLDISHNQITTLPEDICGIKFLKDFNASFNQ 204

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L  L NN I     L  L AS N +  +P++I +L +L  L    N +  +P S++ C  
Sbjct: 205 LNALPNN-IGKLQSLRILDASNNKIKCLPDSISTLKQLEILSFRNNLLDQLP-SLTSCVC 262

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L E  +GNN L+  P++L     +  L+L  N+L E  +   +L +L   D++NN++  L
Sbjct: 263 LKELSLGNNRLTCFPSQLP--VSVTILELRDNKLSEIPLSVTELTQLERFDIANNNVPNL 320

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS--EAST----- 343
           PPE+G M +++ ++++GNP+RT+ S ++N  T ALLK+LRSR+  NE     AST     
Sbjct: 321 PPEVGAMESIKVVVVSGNPIRTISSHILNKGTQALLKHLRSRIVSNETESLNASTGSVIP 380

Query: 344 ----------------------TKEDLITMATRLSVTSK----ELSLEGMNLSAIPSEI- 376
                                 TKE+  ++ T+L++ S+    E+ L   +L+ IP E+ 
Sbjct: 381 QSNSNNDLSNKHLVASSRKLDLTKENPESVTTKLALYSELPVNEVILARCSLTNIPEELS 440

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCI 420
              G ++ L++S N ++ LPP +  C S Q+   DL  N  S +
Sbjct: 441 GYKGSLSTLNMSNNKLKCLPPMI-GCFS-QLGHLDLSGNAMSAL 482



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 149/320 (46%), Gaps = 35/320 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V +  L L  N + ++   +  L  L   ++++N +  LP  +G +  +K + VS N I 
Sbjct: 282 VSVTILELRDNKLSEIPLSVTELTQLERFDIANNNVPNLPPEVGAMESIKVVVVSGNPIR 341

Query: 105 KIPDEI--GSATALVKFDCS---SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            I   I      AL+K   S   SN+ + L +S G  +  S+   SNN +++  + L   
Sbjct: 342 TISSHILNKGTQALLKHLRSRIVSNETESLNASTGSVIPQSN---SNNDLSN--KHLVAS 396

Query: 160 SKMSKLDVEG-----NKLTVLS----NNLIASWTMLTE--------------LIASKNLL 196
           S+   L  E       KL + S    N +I +   LT               L  S N L
Sbjct: 397 SRKLDLTKENPESVTTKLALYSELPVNEVILARCSLTNIPEELSGYKGSLSTLNMSNNKL 456

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P  IG  S+L  LDL  N + ++P  +  C SL E  M  N  + LP  + KL  L 
Sbjct: 457 KCLPPMIGCFSQLGHLDLSGNAMSALPDELGECISLREINMSYNLFTVLPGSIFKLKNLE 516

Query: 257 TLDLHSNQLKEYCVEACQLRLSVLDLS--NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            L   +NQ+ +  V   +L   +  LS  NNS++ +PPE+G  T++  L L GN  R  R
Sbjct: 517 VLVADNNQMTKIDVPNLKLLQQLSTLSLQNNSINEVPPELGLFTSITALKLEGNLFRVPR 576

Query: 315 SSLVNGPTPALLKYLRSRLP 334
            +++   T AL++YLRSRLP
Sbjct: 577 QNVLQKGTLALMEYLRSRLP 596


>gi|345802228|ref|XP_547338.3| PREDICTED: leucine-rich repeat-containing protein 40 [Canis lupus
           familiaris]
          Length = 631

 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 140/410 (34%), Positives = 223/410 (54%), Gaps = 16/410 (3%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           DVP E  +N   +   ++WWE  DL KLIL+ N ++ L +DLR LP LTVL++  N+L+ 
Sbjct: 90  DVPEEANQNLSFSA-AERWWEQTDLTKLILSSNQLQSLTDDLRLLPALTVLDIHDNQLTS 148

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP+AI EL  L+ L+VS N +  +P+EI +   L       N+L  +P    +  NL D 
Sbjct: 149 LPSAIRELENLQKLNVSHNKLQILPEEITNLRNLKGLYLQHNELTRIPEGFEQLFNLEDL 208

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN +T++P   +  S + +L++  N+L  L    I+    L  L  + NLL  +P  
Sbjct: 209 DISNNRLTTVPASFSSLSSLVRLNISSNQLKSLPVE-ISGMKRLKHLDCNSNLLETVPPE 267

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLH 261
           + ++  L  L L +N++  +P     C  L E ++G N +  L P  L  L+ +  LDL 
Sbjct: 268 LANMESLELLYLRRNKLRFLP-EFPSCRLLKELHVGENQIEILGPEHLKHLNSILVLDLR 326

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L+    E   L+ L  LDLSNN +S LP  +GK+  L+ L L GNPLRT+R  ++N 
Sbjct: 327 DNKLRSVPDEITLLQSLERLDLSNNDISSLPCSLGKL-PLKFLALEGNPLRTIRREIINK 385

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMA--TRLSV----TSKELSLEGMNLSAIPS 374
            T  +LKYLRS++ ++  +++ +  E  +T+   +R++V    T K L       + IP 
Sbjct: 386 GTQEVLKYLRSKIKDDGPNQSDSVVETAMTLPSESRVNVHAIITLKILDYSDKQTTLIPD 445

Query: 375 EIWEAGE---ITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCIS 421
           E+++A +   IT ++ S+N + E+P  +     + V   +L  NK S IS
Sbjct: 446 EVFDAVKSNIITSVNFSKNQLCEIPKRIVELKEM-VSDVNLSFNKLSFIS 494



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 153/337 (45%), Gaps = 51/337 (15%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L  E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 296 LKELHVGENQIEILGPEHLKHLNSILVLDLRDNKLRSVPDEITLLQSLERLDLSNNDISS 355

Query: 106 IPDEIGS------------------------ATALVKF------DCSSNQ-------LKE 128
           +P  +G                            ++K+      D   NQ          
Sbjct: 356 LPCSLGKLPLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPNQSDSVVETAMT 415

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+   T +P+++ D  K   ++ ++   N+L  +   ++ 
Sbjct: 416 LPSESRVNVHAIITLKILDYSDKQTTLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRIVE 475

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M++++  S N L+ +   +  L +L  LDL  N + S+P  +     L    +  N 
Sbjct: 476 LKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNR 535

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDLSNNSLSGLPPEIGKM 297
              LP  L  +  L T+ + +NQ+    V+  +++    L  LDL NN L  +PPE+G  
Sbjct: 536 FKILPDVLYHIPTLETILISNNQVG--SVDPQKMKAMENLITLDLQNNDLLQIPPELGNC 593

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 594 VNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRIP 630



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 175/422 (41%), Gaps = 74/422 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S+  L+ +P E+         G K  + +D        N +E +  +L N+  L +L
Sbjct: 231 LNISSNQLKSLPVEI--------SGMKRLKHLDCNS-----NLLETVPPELANMESLELL 277

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-PDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I  + P+ +    +++  D   N+L+ +P  
Sbjct: 278 YLRRNKLRFLPE-FPSCRLLKELHVGENQIEILGPEHLKHLNSILVLDLRDNKLRSVPDE 336

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
           +    +L     SNN I+SLP  L     +  L +EGN L  +   +I   T  + + + 
Sbjct: 337 ITLLQSLERLDLSNNDISSLPCSLGKLP-LKFLALEGNPLRTIRREIINKGTQEVLKYLR 395

Query: 192 SK------NLLNGMPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS--- 231
           SK      N  + + ET  +L    R+++H    L I           P  +        
Sbjct: 396 SKIKDDGPNQSDSVVETAMTLPSESRVNVHAIITLKILDYSDKQTTLIPDEVFDAVKSNI 455

Query: 232 LAEFYMGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N L  +P  + +L ++   ++L  N+L    +E C L +L+ LDL NN L+ 
Sbjct: 456 ITSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCMLQKLTFLDLRNNFLNS 515

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP E+  +  L+ + L+ N  + L   L + PT                           
Sbjct: 516 LPEEMESLIRLQTINLSFNRFKILPDVLYHIPT--------------------------- 548

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + T L +++ ++       S  P ++     +  LDL  N + ++PPEL +C +L+   
Sbjct: 549 -LETIL-ISNNQVG------SVDPQKMKAMENLITLDLQNNDLLQIPPELGNCVNLRTLL 600

Query: 410 SD 411
            D
Sbjct: 601 LD 602


>gi|395530453|ref|XP_003767309.1| PREDICTED: leucine-rich repeat-containing protein 40 [Sarcophilus
           harrisii]
          Length = 638

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 137/414 (33%), Positives = 215/414 (51%), Gaps = 22/414 (5%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           D+P E  +N       ++WWE +DL KLI+++N ++ L +DLR LP LT+L++  N L+ 
Sbjct: 97  DLPEEAKQNHS-FNASERWWEQIDLTKLIISNNKLQSLSDDLRLLPALTILDMHDNLLTS 155

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP AIGEL  L+ L+VS N +  +P E+     L       N+L  +P   G+   L D 
Sbjct: 156 LPCAIGELENLQKLNVSHNKLKTLPQELTKLRNLKGLFLQYNELTCVPEGFGQLHKLEDL 215

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN +T+LP   +  S + +L++  N++  L    I     L  L  + N L  +P  
Sbjct: 216 DLSNNHLTALPVSFSSLSNLMRLNLASNQMKDLPVE-ITRMKRLKHLDCTSNYLQTVPSE 274

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLH 261
           + S+  L  L L +N++  +P     C  L E ++G N +  L P  L  L  +  LDL 
Sbjct: 275 LASMESLELLYLRRNKLRFLP-EFPSCLLLKELHVGENQIEMLGPEHLRHLKSIHVLDLR 333

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+LK    E   L+ L  LDL+NN +S LP  +G +  L+ L L GNPLRT+R  L+N 
Sbjct: 334 DNKLKSIPDEITLLQALERLDLTNNDISSLPHTLGNLPRLQFLALEGNPLRTIRRELLNK 393

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS------KELSLEGMNLSAIPS 374
            T  +LKYLRS++ ++  ++   + E  +T+ ++  V +      K L       + IP 
Sbjct: 394 GTQEVLKYLRSKIKDDPVNQNEASIETAMTLPSQARVNAHTITALKLLDYSDKQTTLIPD 453

Query: 375 EIWEA---GEITKLDLSRNSIQELPP---ELSSCASLQVKFSDLVTNKESCISG 422
           EI++A     IT ++ S+N + E+P    EL +   + + F     NK SC+S 
Sbjct: 454 EIFDAVGNNVITSVNFSKNHLNEIPKRIMELKAVCDINLGF-----NKLSCVSA 502



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 156/343 (45%), Gaps = 63/343 (18%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L  E LR+L  + VL++  NKL  +P  I  L  L+ LD++ N I  
Sbjct: 303 LKELHVGENQIEMLGPEHLRHLKSIHVLDLRDNKLKSIPDEITLLQALERLDLTNNDISS 362

Query: 106 IPDEIGSATALVKFDCSSNQLKEL----------------------------PSSLGRCL 137
           +P  +G+   L       N L+ +                             +S+   +
Sbjct: 363 LPHTLGNLPRLQFLALEGNPLRTIRRELLNKGTQEVLKYLRSKIKDDPVNQNEASIETAM 422

Query: 138 NL-SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
            L S  + + + IT+L   L D S      +       + NN+I S         SKN L
Sbjct: 423 TLPSQARVNAHTITAL--KLLDYSDKQTTLIPDEIFDAVGNNVITSVNF------SKNHL 474

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
           N +P+ I  L  +  ++L  N++  + + +    +LA   + NN L++LP E+  L KL 
Sbjct: 475 NEIPKRIMELKAVCDINLGFNKLSCVSAELGVLQNLAHLDIRNNLLTSLPEEMEALIKLQ 534

Query: 257 TLDLHSNQLKEY---------------------CVEACQLR----LSVLDLSNNSLSGLP 291
           T++L  N+ K +                      V+  QL+    L+ LDL NN L  +P
Sbjct: 535 TINLSFNRFKTFPSVLYRVRSLETILLSNNQVGSVDPLQLKQMDKLATLDLQNNDLLHIP 594

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           PE+G   +LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 595 PELGNCVSLRALLLEGNPFRIPRAAILAKGTEAVLEYLRDRIP 637



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 107/474 (22%), Positives = 188/474 (39%), Gaps = 117/474 (24%)

Query: 14  LNLSNRSLRDVPNEVYK---------NFDE---AGEGDKWWEAVDLQKLILAHNNIEKLK 61
           LN+S+  L+ +P E+ K          ++E     EG  + +   L+ L L++N++  L 
Sbjct: 169 LNVSHNKLKTLPQELTKLRNLKGLFLQYNELTCVPEG--FGQLHKLEDLDLSNNHLTALP 226

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL----- 116
               +L  L  LN++ N++ +LP  I  +  LK LD + N +  +P E+ S  +L     
Sbjct: 227 VSFSSLSNLMRLNLASNQMKDLPVEITRMKRLKHLDCTSNYLQTVPSELASMESLELLYL 286

Query: 117 ----VKF-------------------------------------DCSSNQLKELPSSLGR 135
               ++F                                     D   N+LK +P  +  
Sbjct: 287 RRNKLRFLPEFPSCLLLKELHVGENQIEMLGPEHLRHLKSIHVLDLRDNKLKSIPDEITL 346

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASK- 193
              L     +NN I+SLP  L +  ++  L +EGN L  +   L+   T  + + + SK 
Sbjct: 347 LQALERLDLTNNDISSLPHTLGNLPRLQFLALEGNPLRTIRRELLNKGTQEVLKYLRSKI 406

Query: 194 -----NLLNGMPETIGSLSRLIRLDLHQNRILS-----------IPSSI---SGCCSLAE 234
                N      ET  +L    R++ H    L            IP  I    G   +  
Sbjct: 407 KDDPVNQNEASIETAMTLPSQARVNAHTITALKLLDYSDKQTTLIPDEIFDAVGNNVITS 466

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 293
                N L+ +P  + +L  +  ++L  N+L     E   L+ L+ LD+ NN L+ LP E
Sbjct: 467 VNFSKNHLNEIPKRIMELKAVCDINLGFNKLSCVSAELGVLQNLAHLDIRNNLLTSLPEE 526

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           +  +  L+ + L+ N  +T          P++L  +RS                   + T
Sbjct: 527 MEALIKLQTINLSFNRFKTF---------PSVLYRVRS-------------------LET 558

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            L   ++  S++       P ++ +  ++  LDL  N +  +PPEL +C SL+ 
Sbjct: 559 ILLSNNQVGSVD-------PLQLKQMDKLATLDLQNNDLLHIPPELGNCVSLRA 605


>gi|354478360|ref|XP_003501383.1| PREDICTED: leucine-rich repeat-containing protein 40 [Cricetulus
           griseus]
 gi|344250474|gb|EGW06578.1| Leucine-rich repeat-containing protein 40 [Cricetulus griseus]
          Length = 602

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 152/442 (34%), Positives = 236/442 (53%), Gaps = 25/442 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEAGEG---------DKWWEAVDLQKLILA 53
           +LKAAR+SG LNL+ R+L +VP  V++ N D   E          ++WWE  DL KLI++
Sbjct: 31  LLKAARSSGQLNLAGRNLGEVPQCVWRINVDVPEEANQNLSFSSTERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI S 
Sbjct: 91  SNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNRLNMLPEEITSL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P    R   L D   SNN + ++P   A  S + +L++  N+L 
Sbjct: 151 KNLKVLHLQHNELTGIPEGFERLSGLEDLDLSNNRLATVPAGFALLSSLLRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L    NLL  +P  +GS+  L  L L +N++  +P        L 
Sbjct: 211 SLPAE-ISRMQRLKHLDCDSNLLETVPPDVGSMESLELLYLRRNKLRVLP-EFPSSRQLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++G N +  L AE L +L  +  LDL  N+L+    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHLGENQIETLGAEHLQQLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  S+  +  E  +T+
Sbjct: 329 CSLGNL-HLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDGTSQNDSVPETAMTL 387

Query: 352 A--TRLS----VTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
              +R++    VT K L       + IP ++++A +   I  ++ S+N + E+P  +   
Sbjct: 388 PSESRVNIHAIVTLKLLDYSDKQATLIPDDVFDAAKSNTIISVNFSKNQLCEIPKRIIEL 447

Query: 403 ASLQVKFSDLVTNKESCISGCY 424
             + V   +L  NK S IS  +
Sbjct: 448 KEM-VSDVNLSFNKLSFISQEF 468



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 150/309 (48%), Gaps = 25/309 (8%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L  N +  + E++  L  L  L++S+N +S LP ++G LH LK L +  N +  I  E
Sbjct: 294 LDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNLH-LKFLALEGNPLRTIRRE 352

Query: 110 I---GSATAL------VKFDCSSNQ------LKELPS----SLGRCLNLSDFKASNNCIT 150
           I   G+   L      +K D +S           LPS    ++   + L     S+   T
Sbjct: 353 IIAKGTQEVLKYLRSKIKDDGTSQNDSVPETAMTLPSESRVNIHAIVTLKLLDYSDKQAT 412

Query: 151 SLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +P+D+ D +K   +  ++   N+L  +   +I    M++++  S N L+ + +    L 
Sbjct: 413 LIPDDVFDAAKSNTIISVNFSKNQLCEIPKRIIELKEMVSDVNLSFNKLSFISQEFCLLQ 472

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           +L  LDL  N + S+P  +S    L    +  N    LPA L  +  L  + + +NQ+  
Sbjct: 473 KLTFLDLRNNFLNSLPEEMSSLTKLQTINLSFNRFKVLPAVLYHIPTLEAVLISNNQVGS 532

Query: 268 YCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
              +  +L   LS LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+
Sbjct: 533 VDPQKVKLMENLSTLDLQNNDLLQVPPELGNCVQLRTLLLDGNPFRVPRAAILMKGTAAV 592

Query: 326 LKYLRSRLP 334
           L+YLR R+P
Sbjct: 593 LEYLRDRIP 601


>gi|196008717|ref|XP_002114224.1| hypothetical protein TRIADDRAFT_27850 [Trichoplax adhaerens]
 gi|190583243|gb|EDV23314.1| hypothetical protein TRIADDRAFT_27850 [Trichoplax adhaerens]
          Length = 608

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 144/421 (34%), Positives = 228/421 (54%), Gaps = 24/421 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEA---------GEGDKWWEAVDLQKLILA 53
           +LK AR SGSLNLSNRSL +VP++V++ N D +          + D+WW+ V+L KL L+
Sbjct: 38  LLKQARKSGSLNLSNRSLAEVPDDVWRINLDASKSQQSSSMDNDQDRWWDQVELSKLDLS 97

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ + +D++ L  L  L++  N+L  +P ++ EL  L  L +S N+++ +P+     
Sbjct: 98  SNQLKAISDDVKLLNALVALDIRDNQLENIPESVRELQQLSKLALSRNALVGLPNATCDL 157

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L ELPS +G  L+L     SNN ++ LP  +   + +  L++  NKL 
Sbjct: 158 INLKSLMLEHNKLTELPSEIGNLLHLEILDISNNQLSELPHSIQKLACLKFLNMSNNKLE 217

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
           VL +  IA    L +L  S N +  +      L++L RLD+  N I  +P   S   +L 
Sbjct: 218 VLPSE-IAFMKGLKDLNISSNKIKELKVDFQLLNKLERLDIRCNHIEEVP-VFSTDNTLK 275

Query: 234 EFYMGNNAL-SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E Y+G+N + + L + L KLS +  +D+  N+++    E   ++ L   DL+NN +SGLP
Sbjct: 276 ELYLGSNRIKNLLGSTLQKLSVVAIMDMSENKIEFVPDEVVNMKQLERFDLTNNDISGLP 335

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKED 347
             +G MT L+ L+L GNPLRTLR  +V   T A+LK+LRSR    +P+   S  + T+ +
Sbjct: 336 CNMGNMTQLKSLILNGNPLRTLRRDIVQRGTVAILKFLRSRIAGTIPDLASSVDTNTQGN 395

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWE--AG--EITKLDLSRNSIQELPPELSSCA 403
               AT  S  S   + E    S IP ++W   AG  +I  +D  +N +  +P  L   +
Sbjct: 396 TRINATHSSTGSNVDASEKT--SEIPGDLWSVVAGSDQIRVVDFRKNVLTTVPEPLIEFS 453

Query: 404 S 404
           S
Sbjct: 454 S 454



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 156/304 (51%), Gaps = 21/304 (6%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           ++ N IE + +++ N+  L   ++++N +S LP  +G +  LKSL ++ N +  +  +I 
Sbjct: 303 MSENKIEFVPDEVVNMKQLERFDLTNNDISGLPCNMGNMTQLKSLILNGNPLRTLRRDIV 362

Query: 111 -GSATALVKFDCS--SNQLKELPSSL------GRCLNLSDFKASNNCITS-----LPEDL 156
                A++KF  S  +  + +L SS+         +N +     +N   S     +P DL
Sbjct: 363 QRGTVAILKFLRSRIAGTIPDLASSVDTNTQGNTRINATHSSTGSNVDASEKTSEIPGDL 422

Query: 157 ----ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
               A   ++  +D   N LT +   LI   + + EL  S N L+ +P ++ + ++L  L
Sbjct: 423 WSVVAGSDQIRVVDFRKNVLTTVPEPLIEFSSRIEELYLSSNKLSQLPSSMANFTKLTYL 482

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           DL  N++ ++P  +     L E  + NN  +A+P+ +  LS L  L    N+++   V  
Sbjct: 483 DLGNNQLGNLPIEMESMTKLREIILSNNRFAAIPSVIYTLSSLEVLLATDNKIESIDVSG 542

Query: 273 CQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            +    LSVLDL NN +  +PPE+G +  L+ L L GN  R  R+++++  T A+++YLR
Sbjct: 543 LKQLSELSVLDLQNNDIKEVPPELGTLKALKSLQLGGNLFRIPRAAILSKGTFAVMEYLR 602

Query: 331 SRLP 334
            R+P
Sbjct: 603 GRIP 606



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 98/436 (22%), Positives = 184/436 (42%), Gaps = 91/436 (20%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++SN  L ++P+ + K                L+ L +++N +E L  ++  +  L  L
Sbjct: 186 LDISNNQLSELPHSIQK-------------LACLKFLNMSNNKLEVLPSEIAFMKGLKDL 232

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP-------------------DEIGSA- 113
           N+S NK+ EL      L+ L+ LD+  N I ++P                   + +GS  
Sbjct: 233 NISSNKIKELKVDFQLLNKLERLDIRCNHIEEVPVFSTDNTLKELYLGSNRIKNLLGSTL 292

Query: 114 ---TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
              + +   D S N+++ +P  +     L  F  +NN I+ LP ++ + +++  L + GN
Sbjct: 293 QKLSVVAIMDMSENKIEFVPDEVVNMKQLERFDLTNNDISGLPCNMGNMTQLKSLILNGN 352

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS--------- 221
            L  L  +++   T+         +   +P+   S+    + +   N   S         
Sbjct: 353 PLRTLRRDIVQRGTVAILKFLRSRIAGTIPDLASSVDTNTQGNTRINATHSSTGSNVDAS 412

Query: 222 -----IP----SSISGCCSLAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKEYCVE 271
                IP    S ++G   +       N L+ +P  L + S ++  L L SN+L +    
Sbjct: 413 EKTSEIPGDLWSVVAGSDQIRVVDFRKNVLTTVPEPLIEFSSRIEELYLSSNKLSQLPSS 472

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
                +L+ LDL NN L  LP E+  MT LR+++L+ N    +         P+++  L 
Sbjct: 473 MANFTKLTYLDLGNNQLGNLPIEMESMTKLREIILSNNRFAAI---------PSVIYTLS 523

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           S                   +   L+  +K   +E +++S +     +  E++ LDL  N
Sbjct: 524 S-------------------LEVLLATDNK---IESIDVSGLK----QLSELSVLDLQNN 557

Query: 391 SIQELPPELSSCASLQ 406
            I+E+PPEL +  +L+
Sbjct: 558 DIKEVPPELGTLKALK 573



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 69/164 (42%), Gaps = 39/164 (23%)

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           +L  LDL SNQLK    +   L  L  LD+ +N L  +P  + ++  L KL L+      
Sbjct: 90  ELSKLDLSSNQLKAISDDVKLLNALVALDIRDNQLENIPESVRELQQLSKLALS------ 143

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
            R++LV  P                         DLI +        K L LE   L+ +
Sbjct: 144 -RNALVGLPNATC---------------------DLINL--------KSLMLEHNKLTEL 173

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           PSEI     +  LD+S N + ELP  +   A L  KF ++  NK
Sbjct: 174 PSEIGNLLHLEILDISNNQLSELPHSIQKLACL--KFLNMSNNK 215



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 1/125 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           +++L L+ N + +L   + N   LT L++ +N+L  LP  +  +  L+ + +S N    I
Sbjct: 456 IEELYLSSNKLSQLPSSMANFTKLTYLDLGNNQLGNLPIEMESMTKLREIILSNNRFAAI 515

Query: 107 PDEIGSATALVKFDCSSNQLKELP-SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P  I + ++L     + N+++ +  S L +   LS     NN I  +P +L     +  L
Sbjct: 516 PSVIYTLSSLEVLLATDNKIESIDVSGLKQLSELSVLDLQNNDIKEVPPELGTLKALKSL 575

Query: 166 DVEGN 170
            + GN
Sbjct: 576 QLGGN 580


>gi|299470923|emb|CBN79907.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
          Length = 744

 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 144/438 (32%), Positives = 235/438 (53%), Gaps = 30/438 (6%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFD--EAGEGDKWWEAVDLQKLILAHNNIE 58
           + ++LK AR+SGSLNL+++ L +VP +V+   D  +A +G+K+WEA +LQ+L L+ N I 
Sbjct: 68  LQQLLKQARSSGSLNLTSKGLEEVPGQVFNLLDGVDAADGEKFWEACELQRLDLSFNQIT 127

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE-IGSATALV 117
           +L   + NL +L  L +  N+LS +P  +  L  L  LD++ N+I ++P+E +G+A AL 
Sbjct: 128 ELPAAVSNLSVLVSLKLRKNRLSSVPPELFSLESLSLLDLTGNAIRELPEEGLGAAVALK 187

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
               S N+L  LPSS+G    L   + S+N I SLPE +    +++ L V  N L  L  
Sbjct: 188 GLLLSGNRLSRLPSSVGSLHGLETLELSDNTIRSLPESIDGLKRLATLTVSNNGLASLPE 247

Query: 178 NLIASWTMLTELIASKNLLNGMPET-IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           + +     +  L  S+N +  +P+  +  L  L  LDL +N++  +P    G   LA+ +
Sbjct: 248 S-VGGLRSVKLLDFSRNGIETVPKNGLARLGALTSLDLRENKLTEVPPLPEG-GRLAQVF 305

Query: 237 MGNNALSAL--PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
           +G N L++L   A LG  + L  L + SN++ +   E   L RL  LD+SNN L  LP  
Sbjct: 306 LGFNLLTSLDGAALLGVSAGLTELHVQSNRIGQLPEEVGSLARLKTLDVSNNDLGELPAA 365

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP---------------ENED 338
           +G +  L +L + GNPLRT+R SL++G   +L KYLR+R P                   
Sbjct: 366 LGYLPHLHRLAVDGNPLRTIRRSLLSGGASSLKKYLRTRGPCPDYPGLEAADEDDDAAAS 425

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE----ITKLDLSRNSIQE 394
           S      ED +   +R ++ +  L +EG  ++++P  +++       +T+  LS N +Q 
Sbjct: 426 SGGGGLSEDAVQAVSRSALETGTLDVEGRGMTSLPPGLFQDDRTLSAVTRAKLSGNKLQA 485

Query: 395 L--PPELSSCASLQVKFS 410
              PP ++   SL +  S
Sbjct: 486 FLAPPAIAPPGSLPLSIS 503



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 142/316 (44%), Gaps = 27/316 (8%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           +  L +L +  N I +L E++ +L  L  L+VS+N L ELPAA+G L  L  L V  N +
Sbjct: 323 SAGLTELHVQSNRIGQLPEEVGSLARLKTLDVSNNDLGELPAALGYLPHLHRLAVDGNPL 382

Query: 104 MKIPDEI--GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
             I   +  G A++L K+  +     + P       +     +S      L ED      
Sbjct: 383 RTIRRSLLSGGASSLKKYLRTRGPCPDYPGLEAADEDDDAAASSGGG--GLSEDAVQAVS 440

Query: 162 MSKL-----DVEGNKLTVLSNNLIASWTMLTELIASK---NLLNGM--PETI---GSLSR 208
            S L     DVEG  +T L   L      L+ +  +K   N L     P  I   GSL  
Sbjct: 441 RSALETGTLDVEGRGMTSLPPGLFQDDRTLSAVTRAKLSGNKLQAFLAPPAIAPPGSLPL 500

Query: 209 LI---RLDLHQNRILSIPSSISGCCSLAEFYMGNNALS---ALP-AELGKLSKLGTLDLH 261
            I    LDL  N +  +P +I  C  L    +  N LS    LP A LG L    TLDL 
Sbjct: 501 SISIRELDLSSNDLGEVPPAIFACRGLQTLVLAYNPLSDVSGLPWAALGSLE---TLDLS 557

Query: 262 SNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           +N+L+          L  L+L NN +S +P E+G  T L  LLL GNP R +  SL+   
Sbjct: 558 NNRLRCLGDVVLMTWLRRLNLENNDISPVPLELGLCTGLESLLLAGNPQRQISPSLLQRG 617

Query: 322 TPALLKYLRSRLPENE 337
           T A L YLR RLP + 
Sbjct: 618 TVATLAYLRDRLPPDH 633


>gi|348522608|ref|XP_003448816.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Oreochromis niloticus]
          Length = 597

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 149/434 (34%), Positives = 235/434 (54%), Gaps = 26/434 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R L++VP  V++ N D   EA      G  D+WWE  DL KL+L+
Sbjct: 28  LLKAARKSGQLNLSGRGLKEVPQNVFRLNIDTPEEAQQNVSFGAADRWWEQTDLTKLLLS 87

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N I  L +D+R LP LT L++  N+LS LP+A+GEL  L+ L +S N +  +P E+ + 
Sbjct: 88  SNQITLLSDDIRLLPGLTTLDLHDNQLSSLPSALGELQNLQQLRLSHNQLHSLPVEMCTL 147

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N L+ LP  LG+ +NL++   S+N + SLP        + K+++  N+L+
Sbjct: 148 ENLRSLTLQQNLLENLPEDLGQLVNLTELDVSSNQLKSLPSSFGCLVSLQKVNLCHNQLS 207

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L ++L A  T +  L  S N L  +P ++  +  L +L L  N++  +P   +   +L 
Sbjct: 208 GLPDSL-ARLTNVKLLDCSDNQLTEIPASLSEMLALEQLYLRHNKLRLLPKLPAP--ALK 264

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
           E Y+GNN +  L  E L  LS +  L+L +N++K    E   L  L+ LDL+NN ++ LP
Sbjct: 265 ELYVGNNQIEQLQTEQLSCLSAISLLELRNNKIKIVPEEITLLSTLTRLDLTNNDITSLP 324

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +  +  L  LLL GNPLR +R  +++  T  LLKYLR R+ E  +         ++  
Sbjct: 325 ASLSLLPNLNVLLLEGNPLRGIRRDILSKGTGELLKYLRGRVKEEPEKTDGGDTAMMLPS 384

Query: 352 ATRLSV----TSKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQELPPEL----S 400
             R++V    T K L+       +IP E+++A     I  ++ S+N +  +PP L    S
Sbjct: 385 QARVNVHDIKTLKLLAYSDKQAGSIPEELFDAAADQSIATVNFSKNQLTSVPPRLLEFQS 444

Query: 401 SCASLQVKFSDLVT 414
           S + + + F+ L++
Sbjct: 445 SLSEINLGFNRLIS 458



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 160/339 (47%), Gaps = 50/339 (14%)

Query: 44  AVDLQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           A  L++L + +N IE+L+ E L  L  +++L + +NK+  +P  I  L  L  LD++ N 
Sbjct: 260 APALKELYVGNNQIEQLQTEQLSCLSAISLLELRNNKIKIVPEEITLLSTLTRLDLTNND 319

Query: 103 IMKIPDEI------------GSATALVKFDCSSNQLKELPSSL-GRC------------- 136
           I  +P  +            G+    ++ D  S    EL   L GR              
Sbjct: 320 ITSLPASLSLLPNLNVLLLEGNPLRGIRRDILSKGTGELLKYLRGRVKEEPEKTDGGDTA 379

Query: 137 --------LNLSDFKA------SNNCITSLPEDLADCS---KMSKLDVEGNKLTVLSNNL 179
                   +N+ D K       S+    S+PE+L D +    ++ ++   N+LT +   L
Sbjct: 380 MMLPSQARVNVHDIKTLKLLAYSDKQAGSIPEELFDAAADQSIATVNFSKNQLTSVPPRL 439

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           +   + L+E+    N L      I  L +L  +DL  N++  +PS +     L    +  
Sbjct: 440 LEFQSSLSEINLGFNRLISCSPDICKLLQLTHIDLRNNQLSDLPSEMQNLTKLRSIILIY 499

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIG 295
           N   + P  L +   L T+ L +NQ+ E  V+  +L     LS LDL+NN L  +PPE+G
Sbjct: 500 NRFKSFPDVLYETLSLETILLANNQVCE--VDPSRLMKLTHLSTLDLANNDLLNIPPELG 557

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             TTLR L L GNP RT R+++V   T AL++YLRSR+P
Sbjct: 558 LCTTLRCLSLEGNPFRTPRAAIVAKGTDALMEYLRSRIP 596



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 180/409 (44%), Gaps = 86/409 (21%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V LQK+ L HN +  L + L  L  + +L+ S N+L+E+PA++ E+  L+ L +  N + 
Sbjct: 194 VSLQKVNLCHNQLSGLPDSLARLTNVKLLDCSDNQLTEIPASLSEMLALEQLYLRHNKLR 253

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLN-LSDFKASNNCITSLPEDLADCSKMS 163
            +P     A AL +    +NQ+++L +    CL+ +S  +  NN I  +PE++   S ++
Sbjct: 254 LLPKL--PAPALKELYVGNNQIEQLQTEQLSCLSAISLLELRNNKIKIVPEEITLLSTLT 311

Query: 164 KLDV-----------------------EGNKLTVLSNNLIASWTMLTELIAS-KNLLNGM 199
           +LD+                       EGN L  +  ++++  T   EL+   +  +   
Sbjct: 312 RLDLTNNDITSLPASLSLLPNLNVLLLEGNPLRGIRRDILSKGT--GELLKYLRGRVKEE 369

Query: 200 PE------TIGSLSRLIRLDLHQNRIL-----------SIPSSISGCC---SLAEFYMGN 239
           PE      T   L    R+++H  + L           SIP  +       S+A      
Sbjct: 370 PEKTDGGDTAMMLPSQARVNVHDIKTLKLLAYSDKQAGSIPEELFDAAADQSIATVNFSK 429

Query: 240 NALSALPAELGKL-SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           N L+++P  L +  S L  ++L  N+L     + C+L +L+ +DL NN LS LP E+  +
Sbjct: 430 NQLTSVPPRLLEFQSSLSEINLGFNRLISCSPDICKLLQLTHIDLRNNQLSDLPSEMQNL 489

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
           T LR ++L  N  ++    L                             + +++ T L  
Sbjct: 490 TKLRSIILIYNRFKSFPDVLY----------------------------ETLSLETILLA 521

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            ++   ++       PS + +   ++ LDL+ N +  +PPEL  C +L+
Sbjct: 522 NNQVCEVD-------PSRLMKLTHLSTLDLANNDLLNIPPELGLCTTLR 563


>gi|194211220|ref|XP_001498327.2| PREDICTED: leucine-rich repeat-containing protein 40-like [Equus
           caballus]
          Length = 803

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 140/410 (34%), Positives = 224/410 (54%), Gaps = 16/410 (3%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           D+P E  +N   +   ++WWE  DL KLI+++N ++ L +DLR LP LTVL++  N+L+ 
Sbjct: 262 DIPEEANQNLSFSA-AERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTS 320

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP+AI EL  L+ L+VS N +  +P+EI +   L       N+L  LP    +  +L D 
Sbjct: 321 LPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCLPEGFEQLFSLEDL 380

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN +T +P   +  S + +L++  N+L  L    I+    L  L  + NLL  +P  
Sbjct: 381 DLSNNRLTIVPASFSSLSSLVRLNLSSNQLKSLPAE-ISGMKRLKHLDCNSNLLETIPPE 439

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLH 261
           + S+  L  L L +N++  +P     C  L E ++G N +  L AE L  L+ +  LDL 
Sbjct: 440 LASMESLELLYLRRNKLRFLP-EFPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLR 498

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+LK    E   L+ L  LDLSNN +S LP  +GK+  L+ L L GNPLRT+R  ++N 
Sbjct: 499 DNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGKL-HLKFLALEGNPLRTIRREIINK 557

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMA--TRLSVTS----KELSLEGMNLSAIPS 374
            T  +LKYL+S++ ++E S+ ++  E  +T+   +R++V S    K L         IP 
Sbjct: 558 GTQEVLKYLQSKIKDDEPSQNNSVTETAMTLPSESRVNVHSIVTLKILDYSDKQAVLIPD 617

Query: 375 EIWEAGE---ITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCIS 421
           E+++A +   +T ++ S+N + E+P  +     + V   +L  NK S +S
Sbjct: 618 EVFDAVKSNIVTSVNFSKNQLCEIPKRIIELKEM-VSDVNLSFNKLSFVS 666



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 155/311 (49%), Gaps = 29/311 (9%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L  N ++ + +++  L  L  L++S+N +S LP ++G+LH LK L +  N +  I  E
Sbjct: 495 LDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGKLH-LKFLALEGNPLRTIRRE 553

Query: 110 I---GSATAL------VKFDCSS--NQLKE----LPS----SLGRCLNLSDFKASNNCIT 150
           I   G+   L      +K D  S  N + E    LPS    ++   + L     S+    
Sbjct: 554 IINKGTQEVLKYLQSKIKDDEPSQNNSVTETAMTLPSESRVNVHSIVTLKILDYSDKQAV 613

Query: 151 SLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +P+++ D  K   ++ ++   N+L  +   +I    M++++  S N L+ +   + +L 
Sbjct: 614 LIPDEVFDAVKSNIVTSVNFSKNQLCEIPKRIIELKEMVSDVNLSFNKLSFVSLELCTLQ 673

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           +L  LDL  N + S+P  +     L    +  N    LP  L ++  L T+ + +NQ+  
Sbjct: 674 KLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEVLYRIPTLETILISNNQVG- 732

Query: 268 YCVEACQLR----LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
             V+  +++    L  LDL NN L  +PPE+G    LR LLL GNP R  R++++   T 
Sbjct: 733 -SVDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTA 791

Query: 324 ALLKYLRSRLP 334
           A+L+YLR R+P
Sbjct: 792 AILEYLRDRIP 802



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 186/484 (38%), Gaps = 129/484 (26%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAG---EGDKWWEAVDLQKLILAHNNIEKLK 61
           LN+S+  L+ +P E+         Y   +E     EG  + +   L+ L L++N +  + 
Sbjct: 334 LNVSHNKLKILPEEITNLRNLKGLYLQHNELTCLPEG--FEQLFSLEDLDLSNNRLTIVP 391

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL----- 116
               +L  L  LN+S N+L  LPA I  +  LK LD + N +  IP E+ S  +L     
Sbjct: 392 ASFSSLSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLETIPPELASMESLELLYL 451

Query: 117 ----VKF-------------------------------------DCSSNQLKELPSSLGR 135
               ++F                                     D   N+LK +P  +  
Sbjct: 452 RRNKLRFLPEFPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITL 511

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIASK- 193
             +L     SNN I+SLP  L     +  L +EGN L  +   +I   T  + + + SK 
Sbjct: 512 LQSLERLDLSNNDISSLPYSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLQSKI 570

Query: 194 -----NLLNGMPETIGSLSRLIRLDLH-----------QNRILSIPSSISGCCS---LAE 234
                +  N + ET  +L    R+++H             + + IP  +        +  
Sbjct: 571 KDDEPSQNNSVTETAMTLPSESRVNVHSIVTLKILDYSDKQAVLIPDEVFDAVKSNIVTS 630

Query: 235 FYMGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 292
                N L  +P  + +L ++   ++L  N+L    +E C L +L+ LDL NN L+ LP 
Sbjct: 631 VNFSKNQLCEIPKRIIELKEMVSDVNLSFNKLSFVSLELCTLQKLTFLDLRNNFLNSLPE 690

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE-----DSEASTTKED 347
           E+  +  L+ + L+ N  + L   L   PT      L + L  N      D +   T E+
Sbjct: 691 EMESLIRLQTINLSFNRFKILPEVLYRIPT------LETILISNNQVGSVDPQKMKTMEN 744

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           LIT                                  LDL  N + ++PPEL +C +L+ 
Sbjct: 745 LIT----------------------------------LDLQNNDLLQIPPELGNCVNLRT 770

Query: 408 KFSD 411
              D
Sbjct: 771 LLLD 774


>gi|26375000|dbj|BAB27802.2| unnamed protein product [Mus musculus]
          Length = 602

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 149/439 (33%), Positives = 234/439 (53%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR+SG LNL+ R+L +VP  V++ N D   EA +       ++WW+  DL KLI++
Sbjct: 31  LLKAARSSGQLNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWDQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI S 
Sbjct: 91  SNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEITSL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P        L D   S+N + ++P D A  S + +L++  N+L 
Sbjct: 151 KNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L 
Sbjct: 211 NLPAE-ISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLP-EFPSCRQLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++  N +  L AE L  L  +  LDL  N+L+    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+
Sbjct: 329 CSLGNL-HLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP ++++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSEARVNIHAIATLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + +   +L  NK S IS
Sbjct: 448 KEMVLDI-NLSFNKLSFIS 465



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 158/337 (46%), Gaps = 51/337 (15%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L LA N IEKL  E L++L  + VL++  NKL  +P  +  L  L+ LD+S N I  
Sbjct: 267 LKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF------DCSSNQLKELPS---- 131
           +P  +G+                           ++K+      D  +NQ   +P     
Sbjct: 327 LPCSLGNLHLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMT 386

Query: 132 --SLGRC-------LNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNL 179
             S  R        L L D+  S+   T +P+DL D +K   ++ ++   N+L  +   +
Sbjct: 387 LPSEARVNIHAIATLKLLDY--SDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRI 444

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           +    M+ ++  S N L+ +   +  L +L  LDL  N + S+P  +S    L    +  
Sbjct: 445 VELKEMVLDINLSFNKLSFISHELCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSF 504

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKM 297
           N     P  L ++S L  + + +NQ+     +  +L   L+ LDL NN L  +PPE+G  
Sbjct: 505 NRFKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNC 564

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 565 VQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 162/382 (42%), Gaps = 63/382 (16%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-PDEIGSA 113
           N +E +  D+ ++  L +L +  NKL  LP        LK L ++ N I K+  + +   
Sbjct: 230 NLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELHLAENQIEKLGAEHLQHL 288

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            A++  D   N+L+ +P  +    +L     SNN I+SLP  L +   +  L +EGN L 
Sbjct: 289 QAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLR 347

Query: 174 VLSNNLIASWTM-LTELIASK------NLLNGMPETIGSLSRLIRLDLHQNRILS----- 221
            +   +IA  T  + + + SK      N  + +PET  +L    R+++H    L      
Sbjct: 348 TIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIATLKLLDYS 407

Query: 222 ------IPSSISGCCS---LAEFYMGNNALSALPAELGKLSKLG-TLDLHSNQLKEYCVE 271
                 IP  +        +       N L  +P  + +L ++   ++L  N+L     E
Sbjct: 408 DKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNKLSFISHE 467

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            C L +L+ LDL NN LS LP E+  +T L+ + L+ N  +           P +L  + 
Sbjct: 468 LCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVF---------PEVLYRI- 517

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSL-EGMNLSAIPSEIWEAGEITKLDLSR 389
                      ST +  LI+     SV  +++ L E +N                LDL  
Sbjct: 518 -----------STLEAVLISNNQVGSVDPQKMKLMENLN---------------TLDLQN 551

Query: 390 NSIQELPPELSSCASLQVKFSD 411
           N + ++PPEL +C  L+    D
Sbjct: 552 NDLLQIPPELGNCVQLRTLLLD 573


>gi|405971281|gb|EKC36127.1| Leucine-rich repeat-containing protein 40 [Crassostrea gigas]
          Length = 606

 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 144/448 (32%), Positives = 220/448 (49%), Gaps = 80/448 (17%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEAGEG---------DKWWEAVDLQKLILA 53
           ILK AR +G LNLS R+L  VP+ V++ N D   E          ++WWE  +L KLILA
Sbjct: 29  ILKQARKTGQLNLSGRNLSTVPDTVWRLNLDVPEEARDVSLDNTDERWWEQTELTKLILA 88

Query: 54  ----------------------HNN-IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL 90
                                 H+N +E L + +R L  L  L+VS NKL ELP ++  L
Sbjct: 89  SNLLTEISQEISNFQALSVLDIHDNRLESLPQSIRELENLVKLDVSRNKLKELPESVTYL 148

Query: 91  HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCIT 150
             L+SL V +N ++++ + IG    L   D S+NQL ELP  +G   ++  F  SNN ++
Sbjct: 149 RNLRSLHVEYNELVRVSEGIGHLDKLEDLDLSNNQLSELPPQVGHLYHVLKFNVSNNRLS 208

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           SLP ++   + +  LDV  N+LT L                        PE +G+L  L 
Sbjct: 209 SLPPEIGSMNALKCLDVTHNQLTHL------------------------PEDLGNLPNLE 244

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYC 269
           +L L  N++  IP  +  C +L E ++GNN +  + AE L  L  +  LD+  N++ E  
Sbjct: 245 QLYLRHNQLSGIPL-LKNCKNLKEIHLGNNQIRKITAEHLQHLESVTVLDIRDNKISELP 303

Query: 270 VE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
            E  C   L  LDL+NN L+GLP  +G +T+L+ ++L GNP++++R  ++   T  L KY
Sbjct: 304 EEITCLSGLQRLDLTNNDLTGLPFVLGTITSLKSIVLDGNPMKSIRRDIIMRGTVELKKY 363

Query: 329 LRSRLPENEDSEAST--------------TKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           L SR+ + +  E +               + E L     +    SK L       +A+P 
Sbjct: 364 LCSRIEDPQPVEPTNKGIQNGGDTGIVGGSGEGLKAHDIQ---QSKSLDYSNKKATAVPD 420

Query: 375 EIWEA---GEITKLDLSRNSIQELPPEL 399
           +IWE      +T ++LS+N   +LP  L
Sbjct: 421 DIWEVAMKAGVTSVNLSKNQFTDLPSNL 448



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 158/343 (46%), Gaps = 57/343 (16%)

Query: 46  DLQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +L+++ L +N I K+  E L++L  +TVL++  NK+SELP  I  L  L+ LD++ N + 
Sbjct: 264 NLKEIHLGNNQIRKITAEHLQHLESVTVLDIRDNKISELPEEITCLSGLQRLDLTNNDLT 323

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSL------------------------------- 133
            +P  +G+ T+L       N +K +   +                               
Sbjct: 324 GLPFVLGTITSLKSIVLDGNPMKSIRRDIIMRGTVELKKYLCSRIEDPQPVEPTNKGIQN 383

Query: 134 ----------GRCLNLSDFKAS------NNCITSLPEDLADCS---KMSKLDVEGNKLTV 174
                     G  L   D + S      N   T++P+D+ + +    ++ +++  N+ T 
Sbjct: 384 GGDTGIVGGSGEGLKAHDIQQSKSLDYSNKKATAVPDDIWEVAMKAGVTSVNLSKNQFTD 443

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L +NLI   + L E     N L  +   I    RL  LDL  N +  +P  +     + E
Sbjct: 444 LPSNLILLESTLKEFNFGFNKLTKLNPDISLFLRLTTLDLRNNGLSDLPRDMESLQDMRE 503

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDLSNNSLSGL 290
             +  N  + LP+ L ++ KL  +   +N++    ++A   +    L+ LDL NN++  +
Sbjct: 504 IVLSCNRFTTLPSSLYEMKKLEIIFADNNKIT--TIDAAGFKNLPMLATLDLQNNNIDQV 561

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           PPE+G  T ++ LLL GN  R  R +++   T ALL+YLRSR+
Sbjct: 562 PPELGNCTQIKSLLLNGNAFRNPRPAILTKGTLALLEYLRSRI 604



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 188/464 (40%), Gaps = 119/464 (25%)

Query: 19  RSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHN 78
           RSL    NE+ +  +  G  DK      L+ L L++N + +L   + +L  +   NVS+N
Sbjct: 152 RSLHVEYNELVRVSEGIGHLDK------LEDLDLSNNQLSELPPQVGHLYHVLKFNVSNN 205

Query: 79  KLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLN 138
           +LS LP  IG ++ LK LDV+ N +  +P+++G+   L +     NQL  +P  L  C N
Sbjct: 206 RLSSLPPEIGSMNALKCLDVTHNQLTHLPEDLGNLPNLEQLYLRHNQLSGIPL-LKNCKN 264

Query: 139 LSDFKASNNCI------------------------TSLPEDLADCSKMSKLDVEGNKLTV 174
           L +    NN I                        + LPE++   S + +LD+  N LT 
Sbjct: 265 LKEIHLGNNQIRKITAEHLQHLESVTVLDIRDNKISELPEEITCLSGLQRLDLTNNDLTG 324

Query: 175 LSNNLIASWTMLTELI-------------------------------------ASKNLLN 197
           L   ++ + T L  ++                                      +K + N
Sbjct: 325 LPF-VLGTITSLKSIVLDGNPMKSIRRDIIMRGTVELKKYLCSRIEDPQPVEPTNKGIQN 383

Query: 198 GMPETI--GSLSRLIRLDLHQNRIL--------SIPSSI---SGCCSLAEFYMGNNALSA 244
           G    I  GS   L   D+ Q++ L        ++P  I   +    +    +  N  + 
Sbjct: 384 GGDTGIVGGSGEGLKAHDIQQSKSLDYSNKKATAVPDDIWEVAMKAGVTSVNLSKNQFTD 443

Query: 245 LPAELGKL-SKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LP+ L  L S L   +   N+L +   + +  LRL+ LDL NN LS LP ++  +  +R+
Sbjct: 444 LPSNLILLESTLKEFNFGFNKLTKLNPDISLFLRLTTLDLRNNGLSDLPRDMESLQDMRE 503

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           ++L+ N   TL SSL        +K L     +N                      +K  
Sbjct: 504 IVLSCNRFTTLPSSLYE------MKKLEIIFADN----------------------NKIT 535

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +++      +P        +  LDL  N+I ++PPEL +C  ++
Sbjct: 536 TIDAAGFKNLPM-------LATLDLQNNNIDQVPPELGNCTQIK 572



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 6/207 (2%)

Query: 35  AGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL---LTVLNVSHNKLSELPAAIGELH 91
           +GEG K  +    + L  ++     + +D+  + +   +T +N+S N+ ++LP+ +  L 
Sbjct: 393 SGEGLKAHDIQQSKSLDYSNKKATAVPDDIWEVAMKAGVTSVNLSKNQFTDLPSNLILLE 452

Query: 92  -MLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCIT 150
             LK  +  FN + K+  +I     L   D  +N L +LP  +    ++ +   S N  T
Sbjct: 453 STLKEFNFGFNKLTKLNPDISLFLRLTTLDLRNNGLSDLPRDMESLQDMREIVLSCNRFT 512

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           +LP  L +  K+  +  + NK+T +      +  ML  L    N ++ +P  +G+ +++ 
Sbjct: 513 TLPSSLYEMKKLEIIFADNNKITTIDAAGFKNLPMLATLDLQNNNIDQVPPELGNCTQIK 572

Query: 211 RLDLHQNRILSIPSSI--SGCCSLAEF 235
            L L+ N   +   +I   G  +L E+
Sbjct: 573 SLLLNGNAFRNPRPAILTKGTLALLEY 599


>gi|81916778|sp|Q9CRC8.2|LRC40_MOUSE RecName: Full=Leucine-rich repeat-containing protein 40
 gi|26383433|dbj|BAB30951.2| unnamed protein product [Mus musculus]
          Length = 602

 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 149/439 (33%), Positives = 234/439 (53%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR+SG LNL+ R+L +VP  V++ N D   EA +       ++WW+  DL KLI++
Sbjct: 31  LLKAARSSGQLNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWDQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI S 
Sbjct: 91  SNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEITSL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P        L D   S+N + ++P D A  S + +L++  N+L 
Sbjct: 151 KNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L 
Sbjct: 211 NLPAE-ISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLP-EFPSCRQLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++  N +  L AE L  L  +  LDL  N+L+    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+
Sbjct: 329 CSLGNL-HLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP ++++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSEARVNIHAIATLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + +   +L  NK S IS
Sbjct: 448 KEMVLDI-NLSFNKLSFIS 465



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 158/337 (46%), Gaps = 51/337 (15%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L LA N IEKL  E L++L  + VL++  NKL  +P  +  L  L+ LD+S N I  
Sbjct: 267 LKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF------DCSSNQLKELPS---- 131
           +P  +G+                           ++K+      D  +NQ   +P     
Sbjct: 327 LPCSLGNLHLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMT 386

Query: 132 --SLGRC-------LNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNL 179
             S  R        L L D+  S+   T +P+DL D +K   ++ ++   N+L  +   +
Sbjct: 387 LPSEARVNIHAIATLKLLDY--SDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRI 444

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           +    M+ ++  S N L+ +   +  L +L  LDL  N + S+P  +S    L    +  
Sbjct: 445 VELKEMVLDINLSFNKLSFISHELCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSF 504

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKM 297
           N     P  L ++S L  + + +NQ+     +  +L   L+ LDL NN L  +PPE+G  
Sbjct: 505 NRFKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNC 564

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 565 VQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 162/382 (42%), Gaps = 63/382 (16%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-PDEIGSA 113
           N +E +  D+ ++  L +L +  NKL  LP        LK L ++ N I K+  + +   
Sbjct: 230 NLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELHLAENQIEKLGAEHLQHL 288

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            A++  D   N+L+ +P  +    +L     SNN I+SLP  L +   +  L +EGN L 
Sbjct: 289 QAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLR 347

Query: 174 VLSNNLIASWTM-LTELIASK------NLLNGMPETIGSLSRLIRLDLHQNRILS----- 221
            +   +IA  T  + + + SK      N  + +PET  +L    R+++H    L      
Sbjct: 348 TIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIATLKLLDYS 407

Query: 222 ------IPSSISGCCS---LAEFYMGNNALSALPAELGKLSKLG-TLDLHSNQLKEYCVE 271
                 IP  +        +       N L  +P  + +L ++   ++L  N+L     E
Sbjct: 408 DKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNKLSFISHE 467

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            C L +L+ LDL NN LS LP E+  +T L+ + L+ N  +           P +L  + 
Sbjct: 468 LCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVF---------PEVLYRI- 517

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSL-EGMNLSAIPSEIWEAGEITKLDLSR 389
                      ST +  LI+     SV  +++ L E +N                LDL  
Sbjct: 518 -----------STLEAVLISNNQVGSVDPQKMKLMENLN---------------TLDLQN 551

Query: 390 NSIQELPPELSSCASLQVKFSD 411
           N + ++PPEL +C  L+    D
Sbjct: 552 NDLLQIPPELGNCVQLRTLLLD 573


>gi|31541911|ref|NP_077156.2| leucine-rich repeat-containing protein 40 [Mus musculus]
 gi|26330340|dbj|BAC28900.1| unnamed protein product [Mus musculus]
 gi|74194456|dbj|BAE37277.1| unnamed protein product [Mus musculus]
 gi|148679901|gb|EDL11848.1| leucine rich repeat containing 40, isoform CRA_a [Mus musculus]
          Length = 602

 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 149/439 (33%), Positives = 234/439 (53%), Gaps = 25/439 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EAGEG------DKWWEAVDLQKLILA 53
           +LKAAR+SG LNL+ R+L +VP  V++ N D   EA +       ++WW+  DL KLI++
Sbjct: 31  LLKAARSSGQLNLAGRNLGEVPQCVWRINVDIPEEANQNLSFSSTERWWDQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N ++ L +DLR LP LTVL++  N+L+ LP+AI EL  L+ L+VS N +  +P+EI S 
Sbjct: 91  SNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNKLKILPEEITSL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +P        L D   S+N + ++P D A  S + +L++  N+L 
Sbjct: 151 KNLRTLHLQHNELTCIPEGFEHLSCLEDLDLSSNRLATVPADFALLSSLLRLNLSSNQLK 210

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I+    L  L    NLL  +P  +GS+  L  L L +N++  +P     C  L 
Sbjct: 211 NLPAE-ISRMKRLKHLDCDANLLETVPPDVGSMESLELLYLRRNKLRVLP-EFPSCRQLK 268

Query: 234 EFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
           E ++  N +  L AE L  L  +  LDL  N+L+    E   L+ L  LDLSNN +S LP
Sbjct: 269 ELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLP 328

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             +G +  L+ L L GNPLRT+R  ++   T  +LKYLRS++ ++  ++  +  E  +T+
Sbjct: 329 CSLGNL-HLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTL 387

Query: 352 ATRLSV------TSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSC 402
            +   V      T K L       + IP ++++A +   IT ++ S+N + E+P  +   
Sbjct: 388 PSEARVNIHAIATLKLLDYSDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVEL 447

Query: 403 ASLQVKFSDLVTNKESCIS 421
             + +   +L  NK S IS
Sbjct: 448 KEMVLDI-NLSFNKLSFIS 465



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 158/337 (46%), Gaps = 51/337 (15%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L LA N IEKL  E L++L  + VL++  NKL  +P  +  L  L+ LD+S N I  
Sbjct: 267 LKELHLAENQIEKLGAEHLQHLQAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISS 326

Query: 106 IPDEIGS------------------------ATALVKF------DCSSNQLKELPS---- 131
           +P  +G+                           ++K+      D  +NQ   +P     
Sbjct: 327 LPCSLGNLHLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMT 386

Query: 132 --SLGRC-------LNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNL 179
             S  R        L L D+  S+   T +P+DL D +K   ++ ++   N+L  +   +
Sbjct: 387 LPSEARVNIHAIATLKLLDY--SDKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRI 444

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           +    M+ ++  S N L+ +   +  L +L  LDL  N + S+P  +S    L    +  
Sbjct: 445 VELKEMVLDINLSFNKLSFISHELCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSF 504

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKM 297
           N     P  L ++S L  + + +NQ+     +  +L   L+ LDL NN L  +PPE+G  
Sbjct: 505 NRFKVFPEVLYRISTLEAVLISNNQVGSVDPQKMKLMENLNTLDLQNNDLLQIPPELGNC 564

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 565 VQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 601



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 162/382 (42%), Gaps = 63/382 (16%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-PDEIGSA 113
           N +E +  D+ ++  L +L +  NKL  LP        LK L ++ N I K+  + +   
Sbjct: 230 NLLETVPPDVGSMESLELLYLRRNKLRVLPE-FPSCRQLKELHLAENQIEKLGAEHLQHL 288

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            A++  D   N+L+ +P  +    +L     SNN I+SLP  L +   +  L +EGN L 
Sbjct: 289 QAILVLDLRGNKLRSVPEEMALLQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLR 347

Query: 174 VLSNNLIASWTM-LTELIASK------NLLNGMPETIGSLSRLIRLDLHQNRILS----- 221
            +   +IA  T  + + + SK      N  + +PET  +L    R+++H    L      
Sbjct: 348 TIRREIIAKGTQEVLKYLRSKIKDDRTNQNDSVPETAMTLPSEARVNIHAIATLKLLDYS 407

Query: 222 ------IPSSISGCCS---LAEFYMGNNALSALPAELGKLSKLG-TLDLHSNQLKEYCVE 271
                 IP  +        +       N L  +P  + +L ++   ++L  N+L     E
Sbjct: 408 DKQATLIPDDLFDATKTTLITSINFSKNQLCEIPQRIVELKEMVLDINLSFNKLSFISHE 467

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            C L +L+ LDL NN LS LP E+  +T L+ + L+ N  +           P +L  + 
Sbjct: 468 LCLLQKLTFLDLRNNFLSSLPEEMSSLTKLQTINLSFNRFKVF---------PEVLYRI- 517

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSL-EGMNLSAIPSEIWEAGEITKLDLSR 389
                      ST +  LI+     SV  +++ L E +N                LDL  
Sbjct: 518 -----------STLEAVLISNNQVGSVDPQKMKLMENLN---------------TLDLQN 551

Query: 390 NSIQELPPELSSCASLQVKFSD 411
           N + ++PPEL +C  L+    D
Sbjct: 552 NDLLQIPPELGNCVQLRTLLLD 573


>gi|431896988|gb|ELK06252.1| Leucine-rich repeat-containing protein 40 [Pteropus alecto]
          Length = 574

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/410 (33%), Positives = 221/410 (53%), Gaps = 17/410 (4%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           D+P E  +N   +   ++WWE  DL KLI+++N ++ L +DLR LP LTVL++  N+L+ 
Sbjct: 34  DIPEEANQNLSFSA-TERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTS 92

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP+AI EL  L+ L+VS N +  +P+EI +   L       N+L  +P    +  NL D 
Sbjct: 93  LPSAIRELENLQRLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDL 152

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN +T++P   +  S + +L++  N+L  L    I+    L  L  + NLL  +P  
Sbjct: 153 DLSNNRLTTIPASFS-LSSLVRLNLSSNQLKSLPAE-ISGMKRLKHLDCNSNLLETIPPE 210

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLH 261
           +  +  L  L L +N++  +P     C  L E ++G N +  L AE L  L+ +  LDL 
Sbjct: 211 LAGMESLELLYLRRNKLRFLP-EFPSCKLLKELHVGENQIEMLGAEHLKHLTSILVLDLR 269

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+LK    E   L+ L  LDLSNN +S LP  +GK+  L+ L L GNP+RT+R  ++N 
Sbjct: 270 DNKLKSVPEEITLLQSLERLDLSNNDISSLPCSLGKL-HLKFLALEGNPIRTIRREIINK 328

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV------TSKELSLEGMNLSAIPS 374
            T  +LKYLRS++ +N  +++ +  E  +T+ +   V      T K L       + IP 
Sbjct: 329 GTQEVLKYLRSKIKDNGPNQSDSIMETAMTLPSESRVNIHAITTLKILDYSDKQTTLIPD 388

Query: 375 EIWEAGE---ITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCIS 421
           E+++A +   IT ++ S+N + E+P  +     + V   +L  NK S IS
Sbjct: 389 EVFDAVKSNIITSINFSKNELCEIPKRIVELKEM-VSDVNLSFNKLSFIS 437



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 146/307 (47%), Gaps = 25/307 (8%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ + E++  L  L  L++S+N +S LP ++G+LH LK L +  N I  I  EI 
Sbjct: 268 LRDNKLKSVPEEITLLQSLERLDLSNNDISSLPCSLGKLH-LKFLALEGNPIRTIRREII 326

Query: 111 -GSATALVKF------DCSSNQ-------LKELPS----SLGRCLNLSDFKASNNCITSL 152
                 ++K+      D   NQ          LPS    ++     L     S+   T +
Sbjct: 327 NKGTQEVLKYLRSKIKDNGPNQSDSIMETAMTLPSESRVNIHAITTLKILDYSDKQTTLI 386

Query: 153 PEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+++ D  K   ++ ++   N+L  +   ++    M++++  S N L+ +   +  L +L
Sbjct: 387 PDEVFDAVKSNIITSINFSKNELCEIPKRIVELKEMVSDVNLSFNKLSFISVELCVLQKL 446

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
             LDL  N + S+P  +     L    +  N    LP  L  +  L T+ + +NQ+    
Sbjct: 447 TFLDLRNNFLSSLPKEMESLIRLQTINLSFNRFRILPEVLYHIPTLETVLVSNNQVGSVD 506

Query: 270 VEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
            E  +    L  LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+
Sbjct: 507 PEKLKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILE 566

Query: 328 YLRSRLP 334
           YLR R+P
Sbjct: 567 YLRDRIP 573



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 173/427 (40%), Gaps = 84/427 (19%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L+ +P E+         G K  + +D        N +E +  +L  +  L +L
Sbjct: 174 LNLSSNQLKSLPAEI--------SGMKRLKHLDCNS-----NLLETIPPELAGMESLELL 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I M   + +   T+++  D   N+LK +P  
Sbjct: 221 YLRRNKLRFLPE-FPSCKLLKELHVGENQIEMLGAEHLKHLTSILVLDLRDNKLKSVPEE 279

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-LTELIA 191
           +    +L     SNN I+SLP  L     +  L +EGN +  +   +I   T  + + + 
Sbjct: 280 ITLLQSLERLDLSNNDISSLPCSLGKL-HLKFLALEGNPIRTIRREIINKGTQEVLKYLR 338

Query: 192 SKNLLNG------MPETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS--- 231
           SK   NG      + ET  +L    R+++H    L I           P  +        
Sbjct: 339 SKIKDNGPNQSDSIMETAMTLPSESRVNIHAITTLKILDYSDKQTTLIPDEVFDAVKSNI 398

Query: 232 LAEFYMGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N L  +P  + +L ++   ++L  N+L    VE C L +L+ LDL NN LS 
Sbjct: 399 ITSINFSKNELCEIPKRIVELKEMVSDVNLSFNKLSFISVELCVLQKLTFLDLRNNFLSS 458

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE-----DSEASTT 344
           LP E+  +  L+ + L+ N  R L   L + PT      L + L  N      D E   T
Sbjct: 459 LPKEMESLIRLQTINLSFNRFRILPEVLYHIPT------LETVLVSNNQVGSVDPEKLKT 512

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
            E+LIT                                  LDL  N + ++PPEL +C +
Sbjct: 513 MENLIT----------------------------------LDLQNNDLLQIPPELGNCVN 538

Query: 405 LQVKFSD 411
           L+    D
Sbjct: 539 LRTLLLD 545


>gi|395822105|ref|XP_003784364.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 40 [Otolemur garnettii]
          Length = 600

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 150/441 (34%), Positives = 230/441 (52%), Gaps = 41/441 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD---EA------GEGDKWWEAVDLQKLILA 53
           +LKAAR SG LNLS R+L +VP  V++ N D   EA      G  ++WWE  DL KLI++
Sbjct: 31  LLKAARKSGQLNLSGRNLSEVPQCVWRINVDIPEEANQNLTFGATERWWEQTDLTKLIIS 90

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N ++ L +DLR LP LTVL++  N+L+ LP AIGEL  L+ L+VS N +  +P EI + 
Sbjct: 91  NNKLQSLTDDLRLLPALTVLDIHDNQLASLPPAIGELENLQKLNVSHNKLKILPGEIANL 150

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N+L  +     +  +L D  +   C     E    C  M           
Sbjct: 151 RNLKGLYLQHNELSCISEGFEQLSSLEDLHSRRGCYPFTGESTCVCDYMIA--------- 201

Query: 174 VLSNNLIAS-WTM-LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                 +AS W++ L  L  S NLL  +P  +  +  L  + L +N++  +P     C  
Sbjct: 202 ------VASLWSLGLKHLDCSSNLLEAIPPELAGMESLELVYLWRNKLRFLP-EFPSCRL 254

Query: 232 LAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           L E ++G N +  L AE L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +S 
Sbjct: 255 LKELHIGENQIEVLKAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISS 314

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP  +G +  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++  S++ +  E  +
Sbjct: 315 LPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAM 373

Query: 350 TMA--TRLS----VTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELS 400
           T+   +R++    VT K L        +IP E+++A +   IT ++ S+N + ++P  + 
Sbjct: 374 TLPSESRVNVHAIVTLKTLDYSDKQTPSIPDEVFDAVKSNIITTVNFSKNQLGDVPKRII 433

Query: 401 SCASLQVKFSDLVTNKESCIS 421
               + V   +L  NK S +S
Sbjct: 434 ELKEM-VSDVNLSFNKLSFVS 453



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 160/353 (45%), Gaps = 73/353 (20%)

Query: 47  LQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE LK E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 255 LKELHIGENQIEVLKAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISS 314

Query: 106 IPDEIGS------------------------ATALVKF-------------DCSSNQLKE 128
           +P  +G+                           ++K+             D  +     
Sbjct: 315 LPYSLGNLHLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAMT 374

Query: 129 LPS----SLGRCLNLSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIA 181
           LPS    ++   + L     S+    S+P+++ D  K   ++ ++   N+L  +   +I 
Sbjct: 375 LPSESRVNVHAIVTLKTLDYSDKQTPSIPDEVFDAVKSNIITTVNFSKNQLGDVPKRIIE 434

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP----------------SS 225
              M++++  S N L+ +   +  L +L  LDL   R L IP                +S
Sbjct: 435 LKEMVSDVNLSFNKLSFVSLELCMLQKLTFLDL---RYLLIPLLAFXNNYNLSLSEQETS 491

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLD 281
           +S   +L+   +  N    LP  L ++  L T+ + +NQ+    V+  +++    L+ LD
Sbjct: 492 LSKSVTLS---LNINRFKVLPEVLYRILTLETVLISNNQIG--SVDPQKMKTMENLTTLD 546

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+YLR R+P
Sbjct: 547 LQNNDLLHIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRIP 599



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 164/391 (41%), Gaps = 46/391 (11%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W ++ L+ L  + N +E +  +L  +  L ++ +  NKL  LP       +LK L +  N
Sbjct: 206 W-SLGLKHLDCSSNLLEAIPPELAGMESLELVYLWRNKLRFLPE-FPSCRLLKELHIGEN 263

Query: 102 SIMKIPDE-IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
            I  +  E +    +++  D   N+LK +P  +    +L     SNN I+SLP  L +  
Sbjct: 264 QIEVLKAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNL- 322

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTM-LTELIASKNLLNG------MPETIGSLSRLIRLD 213
            +  L +EGN L  +   +I   T  + + + SK   +G      + ET  +L    R++
Sbjct: 323 HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSDSVTETAMTLPSESRVN 382

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK---LGTLDLHSNQLKEYCV 270
           +H               +L      +    ++P E+    K   + T++   NQL +   
Sbjct: 383 VH------------AIVTLKTLDYSDKQTPSIPDEVFDAVKSNIITTVNFSKNQLGDVPK 430

Query: 271 EACQLR--LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
              +L+  +S ++LS N LS +  E+  +  L  L         LR  L+  P  A    
Sbjct: 431 RIIELKEMVSDVNLSFNKLSFVSLELCMLQKLTFL--------DLRYLLI--PLLAFXNN 480

Query: 329 LRSRLPENEDS--EASTTKEDLITMATRLSVTSKELSLEGMNLS------AIPSEIWEAG 380
               L E E S  ++ T   ++        V  + L+LE + +S        P ++    
Sbjct: 481 YNLSLSEQETSLSKSVTLSLNINRFKVLPEVLYRILTLETVLISNNQIGSVDPQKMKTME 540

Query: 381 EITKLDLSRNSIQELPPELSSCASLQVKFSD 411
            +T LDL  N +  +PPEL +C +L+    D
Sbjct: 541 NLTTLDLQNNDLLHIPPELGNCVNLRTLLLD 571


>gi|413939568|gb|AFW74119.1| hypothetical protein ZEAMMB73_915670 [Zea mays]
          Length = 412

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/201 (53%), Positives = 133/201 (66%), Gaps = 41/201 (20%)

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI---- 294
           NN LS++PA++G LSKLG LDLHSNQLKEY V AC L+LS LDLSNNSLSGLP E+    
Sbjct: 27  NNLLSSIPADIGTLSKLGILDLHSNQLKEYPVGACNLKLSFLDLSNNSLSGLPAELDHRS 86

Query: 295 ----------------------------------GKMTTLRKLLLTGNPLRTLRSSLVNG 320
                                             GKMTTLRKLLLTGNP+RTLRSSLV+G
Sbjct: 87  DSCMRDKCMLWPLRTSYSLWYCLTENSDNPCATQGKMTTLRKLLLTGNPMRTLRSSLVSG 146

Query: 321 PTPALLKYLRSRLPENED---SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
           PT  LLKYLRSRL  +E+   S ++ TK+D I  A RLS++SKEL L G+ ++++P+  W
Sbjct: 147 PTTTLLKYLRSRLSSDEEASGSRSTPTKDDQIAAARRLSLSSKELDLSGLGVTSVPAAAW 206

Query: 378 EAGEITKLDLSRNSIQELPPE 398
           E  ++ KLDLS+NSI++LP E
Sbjct: 207 ETSDVVKLDLSKNSIEDLPNE 227



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 121/264 (45%), Gaps = 46/264 (17%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S   ++ +PAA  E   +  LD+S NSI  +P+E+   ++L     S+N++K  P +
Sbjct: 191 LDLSGLGVTSVPAAAWETSDVVKLDLSKNSIEDLPNELSLCSSLQSLVLSNNKIKRWPHT 250

Query: 133 LGRCLN-LSDFKASNNCITSLPE-DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           +   L  LS  K  NN +  +   DL   SK+  LD+ GN   +   + +++   L EL 
Sbjct: 251 VVSSLPCLSSLKLDNNPLVEISSTDLVPLSKLEVLDLSGNASALPEPSAVSALPQLQELY 310

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +  L+  P  +  L  L  LDL QN + ++P  I    +L E  + +N ++ALPAELG
Sbjct: 311 LRRMKLHEFPNGLLGLKLLRILDLSQNHLTTVPEGIKNFTALIELDLSDNNITALPAELG 370

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L                                               L+ L L GNPL
Sbjct: 371 LLE--------------------------------------------ANLQVLKLDGNPL 386

Query: 311 RTLRSSLVNGPTPALLKYLRSRLP 334
           R++R +L+   T A+LKYL+ +LP
Sbjct: 387 RSIRRTLLERGTKAVLKYLKEKLP 410



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 39/68 (57%)

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           LP L  L +   KL E P  +  L +L+ LD+S N +  +P+ I + TAL++ D S N +
Sbjct: 303 LPQLQELYLRRMKLHEFPNGLLGLKLLRILDLSQNHLTTVPEGIKNFTALIELDLSDNNI 362

Query: 127 KELPSSLG 134
             LP+ LG
Sbjct: 363 TALPAELG 370



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 152/365 (41%), Gaps = 72/365 (19%)

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC-LNLSDFKASNNCITSLPEDL--- 156
           N +  IP +IG+ + L   D  SNQLKE P  +G C L LS    SNN ++ LP +L   
Sbjct: 28  NLLSSIPADIGTLSKLGILDLHSNQLKEYP--VGACNLKLSFLDLSNNSLSGLPAELDHR 85

Query: 157 --------------------------------ADCSKMS---KLDVEGNKLTVLSNNLIA 181
                                           A   KM+   KL + GN +  L ++L++
Sbjct: 86  SDSCMRDKCMLWPLRTSYSLWYCLTENSDNPCATQGKMTTLRKLLLTGNPMRTLRSSLVS 145

Query: 182 SWT-----MLTELIASKNLLNGMPET------IGSLSRL----IRLDLHQNRILSIPSSI 226
             T      L   ++S    +G   T      I +  RL      LDL    + S+P++ 
Sbjct: 146 GPTTTLLKYLRSRLSSDEEASGSRSTPTKDDQIAAARRLSLSSKELDLSGLGVTSVPAAA 205

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSN 284
                + +  +  N++  LP EL   S L +L L +N++K +   V +    LS L L N
Sbjct: 206 WETSDVVKLDLSKNSIEDLPNELSLCSSLQSLVLSNNKIKRWPHTVVSSLPCLSSLKLDN 265

Query: 285 NSLSGLP-PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           N L  +   ++  ++ L  L L+GN      S+L   P P+ +    S LP+ ++     
Sbjct: 266 NPLVEISSTDLVPLSKLEVLDLSGN-----ASAL---PEPSAV----SALPQLQELYLRR 313

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC- 402
            K              + L L   +L+ +P  I     + +LDLS N+I  LP EL    
Sbjct: 314 MKLHEFPNGLLGLKLLRILDLSQNHLTTVPEGIKNFTALIELDLSDNNITALPAELGLLE 373

Query: 403 ASLQV 407
           A+LQV
Sbjct: 374 ANLQV 378


>gi|167519697|ref|XP_001744188.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777274|gb|EDQ90891.1| predicted protein [Monosiga brevicollis MX1]
          Length = 570

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/438 (32%), Positives = 228/438 (52%), Gaps = 20/438 (4%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEAGEG--------DKWWEAVDLQKLI 51
           M+ +LK AR SG LNL+NR L  VP++V++ N D   +         D+WWE V L +LI
Sbjct: 4   MEALLKQARASGQLNLANRQLEAVPDQVWRINLDAPAQAGAVSFDSEDRWWEQVGLARLI 63

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N +  L E L  LP LT+L+   NK++ +   +G+L  LK+L++  N +  +P  + 
Sbjct: 64  LSCNQLTTLPEQLELLPDLTLLDAHDNKITVISERLGQLAQLKALNLGQNCLENLPQSLY 123

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
              AL      +N L+ L  +L +   L +  AS+N +  LPE L D   +++L +  N+
Sbjct: 124 HLPALQSLKLDNNALRSLAPALRQLSELRELDASHNRLVELPESLCDLPHLARLRLGHNQ 183

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L  L          L EL    N L  +P  +GSLS + RLD+  N +  +P S++    
Sbjct: 184 LESLPAP-FGQLEALQELDIVHNRLTSLPTKLGSLSHITRLDVRYNALQRLP-SLASMTQ 241

Query: 232 LAEFYMGNNALSALPAELGKLSKLG--TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           L E  +G N +  L  +LG L   G   LD+  N++ +       LR L  L+LSNN +S
Sbjct: 242 LKELLVGYNQIHTL-GDLGALLPAGLVLLDVRDNKIADIPATIAALRQLERLELSNNDIS 300

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-ED 347
            LPPE+G + +++ + L GNPLR+LR  +V   T A+L++LRSRLPE  + E    +  +
Sbjct: 301 SLPPELGLVRSIKAISLDGNPLRSLRRDIVRRGTLAILEHLRSRLPETAEVEPEAQQYAE 360

Query: 348 LITMATRLS--VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            +    R +    +  L+L    L  +PS+I++   + +  L +N +  LP ++   +S 
Sbjct: 361 QVAQRERQTDLAQTGALNLSNQGLDHVPSDIFQEA-VEQGTLQKNKLLHLPAQVDQLSST 419

Query: 406 QVKFSDLVTNKESCISGC 423
                DL  N+ S +S  
Sbjct: 420 LTHL-DLGFNRLSTLSSA 436



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 151/330 (45%), Gaps = 46/330 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPL-LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L++ +N I  L +    LP  L +L+V  NK++++PA I  L  L+ L++S N I  
Sbjct: 242 LKELLVGYNQIHTLGDLGALLPAGLVLLDVRDNKIADIPATIAALRQLERLELSNNDISS 301

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKA--------------------- 144
           +P E+G   ++       N L+ L   + R   L+  +                      
Sbjct: 302 LPPELGLVRSIKAISLDGNPLRSLRRDIVRRGTLAILEHLRSRLPETAEVEPEAQQYAEQ 361

Query: 145 ------------------SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
                             SN  +  +P D+     + +  ++ NKL  L   +    + L
Sbjct: 362 VAQRERQTDLAQTGALNLSNQGLDHVPSDIFQ-EAVEQGTLQKNKLLHLPAQVDQLSSTL 420

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
           T L    N L+ +   IG L RL+ L+L  N + S+P  ++    L +  +G+N  +ALP
Sbjct: 421 THLDLGFNRLSTLSSAIGLLPRLVSLELEGNALTSLPEELALLSELQDLGLGHNRFTALP 480

Query: 247 AELGKLSKLGTLDLHSNQLKEY---CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
             +  L  L  L L+ NQ+       + AC + L  +DL NN++  +PP +G +  L  L
Sbjct: 481 DVVRHLRALQNLMLNDNQVSTVDPDVLLACPM-LRCVDLHNNAIQQVPPRLG-LLNLHTL 538

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
            L GN  R  R ++++  T A+L+YL+SR+
Sbjct: 539 KLEGNLFRMPRQTILDKGTGAVLEYLKSRI 568



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 73/171 (42%), Gaps = 12/171 (7%)

Query: 11  SGSLNLSNRSLRDVPNEVYKNFDEAGEGDK-----WWEAVD-----LQKLILAHNNIEKL 60
           +G+LNLSN+ L  VP+++++   E G   K         VD     L  L L  N +  L
Sbjct: 374 TGALNLSNQGLDHVPSDIFQEAVEQGTLQKNKLLHLPAQVDQLSSTLTHLDLGFNRLSTL 433

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
              +  LP L  L +  N L+ LP  +  L  L+ L +  N    +PD +    AL    
Sbjct: 434 SSAIGLLPRLVSLELEGNALTSLPEELALLSELQDLGLGHNRFTALPDVVRHLRALQNLM 493

Query: 121 CSSNQLKEL-PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
            + NQ+  + P  L  C  L      NN I  +P  L     +  L +EGN
Sbjct: 494 LNDNQVSTVDPDVLLACPMLRCVDLHNNAIQQVPPRLG-LLNLHTLKLEGN 543


>gi|403339641|gb|EJY69086.1| hypothetical protein OXYTRI_10295 [Oxytricha trifallax]
          Length = 809

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 213/397 (53%), Gaps = 19/397 (4%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK A+ +G+L +++R L+  P E+ K F E    + WW+  DLQK+ L++N I ++ E++
Sbjct: 30  LKRAKQNGTLIIADRQLKAFPGEILK-FSELQITENWWDTFDLQKIDLSNNEIPEIPEEI 88

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
                +   N+S+NK+  +P  +  L  LK LD+S+N I  +P+ I    ALV+F  + N
Sbjct: 89  SAQEFIAWFNISNNKIEIVPNGLLALKTLKFLDLSYNKIKILPEAIAMTEALVEFHVAGN 148

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
            L ELP S+G   NL       N +  LP +     ++ KLD+E N+LT + +N  +S T
Sbjct: 149 MLIELPRSIGDLKNLEILDIKKNKLQYLPIEFGCLPRILKLDLEDNQLTRV-DNFFSSLT 207

Query: 185 MLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
            LT L  SKN +  + +  + +L+ L+ LD+HQN++ +  SS+     L    +  N + 
Sbjct: 208 TLTHLNLSKNKITQIDQDALANLTNLVELDMHQNQMRTF-SSVPNSFKLDSLALAYNFIE 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            +   L + + L  LDLH+N+L+E+      L+ L  L +SNN+LS + P I  +  L +
Sbjct: 267 QI-QNLDRAANLSVLDLHNNKLEEFPESIIDLKNLKTLKISNNNLSDINPRISLLPVLVR 325

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           + + GNPL+ ++S++ N     L KYL+ RL   +D E    +E+   +  ++   SK+ 
Sbjct: 326 ITIEGNPLKCIKSTMRNAGADQLKKYLKMRL---DDGEVQ-IEENKQAVIKQIPGASKDF 381

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                     P +I     I+  +LS N+  +LP ++
Sbjct: 382 D---------PWDILLREFISNTNLSENAFTDLPEDI 409



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 160/357 (44%), Gaps = 64/357 (17%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           +  L  L LA+N IE++ ++L     L+VL++ +NKL E P +I +L  LK+L +S N++
Sbjct: 252 SFKLDSLALAYNFIEQI-QNLDRAANLSVLDLHNNKLEEFPESIIDLKNLKTLKISNNNL 310

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSS--------LGRCLNL---------------- 139
             I   I     LV+     N LK + S+        L + L +                
Sbjct: 311 SDINPRISLLPVLVRITIEGNPLKCIKSTMRNAGADQLKKYLKMRLDDGEVQIEENKQAV 370

Query: 140 --------SDFKA--------------SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
                    DF                S N  T LPED+     + +L V+ NKL  L  
Sbjct: 371 IKQIPGASKDFDPWDILLREFISNTNLSENAFTDLPEDIILLKNLKQLRVQNNKLKNLPL 430

Query: 178 NLIASWTMLTELIASKNLLNGMPETIG----SLSRLIRLDLHQNRILSIPSSISGCCSLA 233
           NL+   ++ +   A+  L+    ++I     +L  L  L L+ N I  +P  +     L 
Sbjct: 431 NLLKMQSLQSIQFANNQLIRFYDDSISRQEVNLPNLTFLSLNANNITQVPPILKYLPKLQ 490

Query: 234 EFYMGNNALSALPAEL--GKLSKLGTLDLHSNQLKE-------YCVEACQLRLSVLDLSN 284
           + ++  N +S +  EL   +  +L  LDL +N+L+E       YC     L L   D+S+
Sbjct: 491 QLHLHMNKISDV-KELCRKQFKQLEVLDLGNNKLREIPIALIHYCENLTLLNLQNNDISD 549

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
               G+P  IG    ++ + + GNPL+++R +++   T A+LKYLR +  E  DS+ 
Sbjct: 550 ---RGIPNLIGIHKNIKTIQIDGNPLKSIRRAIIEKGTEAILKYLRDKFVEERDSQV 603


>gi|428169946|gb|EKX38875.1| hypothetical protein GUITHDRAFT_114981 [Guillardia theta CCMP2712]
          Length = 579

 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 142/446 (31%), Positives = 222/446 (49%), Gaps = 83/446 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLIL----------- 52
           + ++A ++G+LNL++R+L  VP E+  ++      + WWE  +L+KL L           
Sbjct: 87  VFRSAHSNGNLNLADRNLDSVP-ELLLSWSAPIGDENWWEVSELKKLDLSLNALSNLPDD 145

Query: 53  -------------AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
                        A+N ++ L   L + P L+ LN+ HN+ + LP  +G L  L SL V 
Sbjct: 146 LFASFSLLQTLHVANNKLQTLPPSLTSCPELSKLNIQHNQFATLPGFVGHLSCLSSLQVD 205

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N+I  +P+EIG    L  F CS+NQL++LPSSLG   +L+    S+N I ++P  +   
Sbjct: 206 HNAIHTLPEEIGLLHNLDTFTCSNNQLQQLPSSLGHLTSLTFLNMSSNRIEAIPGTV--- 262

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
                    GN L+            LT L AS NLL  +P+ + +LS L RLD+ +N  
Sbjct: 263 ---------GNLLS------------LTSLEASHNLLQSLPDGLRNLSNLTRLDVREN-C 300

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--- 275
           L+  +S+     ++E  +G N +   P  LG +L  L  LD+  N +    +EA  L   
Sbjct: 301 LTSATSLPHAPRMSELLLGFNKIQTFPPNLGDRLKSLSVLDIRDNAISN--LEASDLTGL 358

Query: 276 -----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---- 314
                            +L +LD+ NN +  +PPE+G MTTL  +LL GNPL+T+R    
Sbjct: 359 KVSMLVDNLGAPSDIDMKLKMLDVRNNEIKMVPPELGLMTTLTSILLDGNPLKTMRRCDE 418

Query: 315 --SSLVNGPTPALLKYLRSRLPEN--EDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
              +++ G    +L+YLRSR+ +N  ED   S    D + M  R SV +  L L+G+ L 
Sbjct: 419 SGGTIITGTAREILEYLRSRIQQNPEEDVPTSGLTRD-VAMTIRSSVGNGLLCLKGLQLQ 477

Query: 371 AIPSEIWEAGEITK-LDLSRNSIQEL 395
             P + +   +  K LD S N+++ L
Sbjct: 478 DFPYDCFNLSDSLKSLDFSDNNLESL 503


>gi|427794931|gb|JAA62917.1| Putative mitotic protein, partial [Rhipicephalus pulchellus]
          Length = 601

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 144/447 (32%), Positives = 226/447 (50%), Gaps = 31/447 (6%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK----NFDEAGE---------GDKWWEAVDLQKL 50
           ++K AR SG LNL+   L DVP++++       DE  E         GD+WW+  DL KL
Sbjct: 22  MIKLARKSGELNLTGVGLSDVPDQLWNINNLTEDERKELSISLDECDGDRWWDQADLTKL 81

Query: 51  ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI 110
            L+ N++  L  D+     L +L ++ N L+ LP  IG LH L  L++S N + ++PD  
Sbjct: 82  YLSSNSLSSLSPDIEKFHALLILELNDNALTSLPDTIGNLHHLTKLNISRNKLQRLPDSF 141

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
                L +     N + EL   +G    L     S+N ++SLP  +   S+ + +++  N
Sbjct: 142 YQLKELRQLLAHHNDIAELSDDIGNLSLLELVDLSHNKLSSLPAMIGFLSRAANVNLSHN 201

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
            L  L    I S   L  L  S N L  +PE+IGSL  L +L   QN + ++P   + C 
Sbjct: 202 SLAELPPE-IGSMNALQILDVSSNRLRSLPESIGSLCHLEQLFAQQNELTALP-PFTSCG 259

Query: 231 SLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            L E ++GNNA+   P E +  L  L TLDL SN+L     +   ++ L  LDLSNN+L+
Sbjct: 260 RLMELHVGNNAMEEFPIEVIETLLSLKTLDLKSNKLSTLSPDITMIQGLERLDLSNNNLA 319

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS------ 342
            LP E+G +  L+ L + GNPLR +R  +V   T  LLK+L+ RL E+ +  A       
Sbjct: 320 SLPYELGTLVHLKGLGVEGNPLRAIRRDIVKRGTVHLLKWLQDRLGESPEGAARKRLSGG 379

Query: 343 ---TTKEDLITMATRLSV-TSKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQEL 395
                  DLI    + ++ T+  L L   +L  +P EI++     +   +DLS+N+++ +
Sbjct: 380 AALNDGSDLIESIEKFALKTTHALELSKRSLHDVPEEIFKMAAECDANTIDLSKNALESV 439

Query: 396 PPELSSCASLQVKFSDLVTNKESCISG 422
           P  L +   +  +  +L  NK + + G
Sbjct: 440 PKGLEAACPVVTEL-NLSFNKLTALPG 465



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 184/399 (46%), Gaps = 40/399 (10%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D +++  +L++L+  HN+I +L +D+ NL LL ++++SHNKLS LPA IG L    ++++
Sbjct: 139 DSFYQLKELRQLLAHHNDIAELSDDIGNLSLLELVDLSHNKLSSLPAMIGFLSRAANVNL 198

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S NS+ ++P EIGS  AL   D SSN+L+ LP S+G   +L    A  N +T+LP     
Sbjct: 199 SHNSLAELPPEIGSMNALQILDVSSNRLRSLPESIGSLCHLEQLFAQQNELTALPP-FTS 257

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
           C ++ +L V  N +      +I +   L  L    N L+ +   I  +  L RLDL  N 
Sbjct: 258 CGRLMELHVGNNAMEEFPIEVIETLLSLKTLDLKSNKLSTLSPDITMIQGLERLDLSNNN 317

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 278
           + S+P  +     L    +  N L A+  ++ K   +  L    ++L E    A + RLS
Sbjct: 318 LASLPYELGTLVHLKGLGVEGNPLRAIRRDIVKRGTVHLLKWLQDRLGESPEGAARKRLS 377

Query: 279 ------------------------VLDLSNNSLSGLPPEIGKMTT---LRKLLLTGNPLR 311
                                    L+LS  SL  +P EI KM        + L+ N L 
Sbjct: 378 GGAALNDGSDLIESIEKFALKTTHALELSKRSLHDVPEEIFKMAAECDANTIDLSKNALE 437

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           ++   L     P + +        N      T     + +ATRL+     L L    LS 
Sbjct: 438 SVPKGL-EAACPVVTEL-------NLSFNKLTALPGFLCLATRLTF----LDLRNNQLSD 485

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFS 410
           +P E+     + ++ LS N    +P  ++S  SL++ F+
Sbjct: 486 LPGEMSVLSNVREVSLSFNRFSRIPEVVTSWQSLEILFA 524



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 165/352 (46%), Gaps = 46/352 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++ N ++ + P EV +              + L+ L L  N +  L  D+  +  L  L
Sbjct: 264 LHVGNNAMEEFPIEVIETL------------LSLKTLDLKSNKLSTLSPDITMIQGLERL 311

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS-- 131
           ++S+N L+ LP  +G L  LK L V  N +  I  +I     +       ++L E P   
Sbjct: 312 DLSNNNLASLPYELGTLVHLKGLGVEGNPLRAIRRDIVKRGTVHLLKWLQDRLGESPEGA 371

Query: 132 -----SLGRCLN--------LSDF--------KASNNCITSLPEDL----ADCSKMSKLD 166
                S G  LN        +  F        + S   +  +PE++    A+C   + +D
Sbjct: 372 ARKRLSGGAALNDGSDLIESIEKFALKTTHALELSKRSLHDVPEEIFKMAAECDA-NTID 430

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N L  +   L A+  ++TEL  S N L  +P  +   +RL  LDL  N++  +P  +
Sbjct: 431 LSKNALESVPKGLEAACPVVTELNLSFNKLTALPGFLCLATRLTFLDLRNNQLSDLPGEM 490

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDL 282
           S   ++ E  +  N  S +P  +     L  L    N+++E  ++  QL+    ++VLDL
Sbjct: 491 SVLSNVREVSLSFNRFSRIPEVVTSWQSLEILFASDNKIEE--LDTTQLQKLKHIAVLDL 548

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            NNS+  +PPE+G M  LR L L GNP R  R ++++  TPALL++LR R+P
Sbjct: 549 RNNSIRQVPPELGNMRQLRSLQLEGNPFRNPRPAILSKGTPALLEFLRDRIP 600


>gi|427794929|gb|JAA62916.1| Putative mitotic protein, partial [Rhipicephalus pulchellus]
          Length = 601

 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 143/448 (31%), Positives = 227/448 (50%), Gaps = 33/448 (7%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--------------NFDEAGEGDKWWEAVDLQK 49
           ++K AR SG LNL+   L DVP++++               + DE  +GD+WW+  DL K
Sbjct: 22  MIKLARKSGELNLTGVGLSDVPDQLWNINNLTEDERRELSISLDEC-DGDRWWDQADLTK 80

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L+ N++  L  D+     L +L ++ N L+ LP  IG LH L  L++S N + ++PD 
Sbjct: 81  LYLSSNSLSSLSPDIEKFHALLILELNDNALTSLPDTIGNLHHLTKLNISRNKLQRLPDS 140

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                 L +     N + EL   +G    L     S+N ++SLP  +   S+ + +++  
Sbjct: 141 FYQLKELRQLLAHHNDIAELSDDIGNLSLLELVDLSHNKLSSLPAMIGFLSRAANVNLSH 200

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N L  L    I S   L  L  S N L  +PE+IGSL  L +L   QN + ++P   + C
Sbjct: 201 NSLAELPPE-IGSMNALQILDVSSNRLRSLPESIGSLCHLEQLFAQQNELTALP-PFTSC 258

Query: 230 CSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             L E ++GNNA+   P E +  L  L TLDL SN+L     +   ++ L  LDLSNN+L
Sbjct: 259 GRLMELHVGNNAMEEFPIEVIETLLSLKTLDLKSNKLSTLSPDITMIQGLERLDLSNNNL 318

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS----- 342
           + LP E+G +  L+ L + GNPLR +R  +V   T  LLK+L+ RL E+ +  A      
Sbjct: 319 ASLPYELGTLVHLKGLGVEGNPLRAIRRDIVKRGTVHLLKWLQDRLGESPEGAARKRLSG 378

Query: 343 ----TTKEDLITMATRLSV-TSKELSLEGMNLSAIPSEIWEAG---EITKLDLSRNSIQE 394
                   DLI    + ++ T+  L L   +L  +P EI++     +   +DLS+N+++ 
Sbjct: 379 GAGLNDGSDLIESIEKFALKTTHALELSKRSLHDVPEEIFKMAAECDANTIDLSKNALES 438

Query: 395 LPPELSSCASLQVKFSDLVTNKESCISG 422
           +P  L +   +  +  +L  NK + + G
Sbjct: 439 VPKGLEAACPVVTEL-NLSFNKLTALPG 465



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 184/399 (46%), Gaps = 40/399 (10%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D +++  +L++L+  HN+I +L +D+ NL LL ++++SHNKLS LPA IG L    ++++
Sbjct: 139 DSFYQLKELRQLLAHHNDIAELSDDIGNLSLLELVDLSHNKLSSLPAMIGFLSRAANVNL 198

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S NS+ ++P EIGS  AL   D SSN+L+ LP S+G   +L    A  N +T+LP     
Sbjct: 199 SHNSLAELPPEIGSMNALQILDVSSNRLRSLPESIGSLCHLEQLFAQQNELTALPP-FTS 257

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
           C ++ +L V  N +      +I +   L  L    N L+ +   I  +  L RLDL  N 
Sbjct: 258 CGRLMELHVGNNAMEEFPIEVIETLLSLKTLDLKSNKLSTLSPDITMIQGLERLDLSNNN 317

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 278
           + S+P  +     L    +  N L A+  ++ K   +  L    ++L E    A + RLS
Sbjct: 318 LASLPYELGTLVHLKGLGVEGNPLRAIRRDIVKRGTVHLLKWLQDRLGESPEGAARKRLS 377

Query: 279 ------------------------VLDLSNNSLSGLPPEIGKMTT---LRKLLLTGNPLR 311
                                    L+LS  SL  +P EI KM        + L+ N L 
Sbjct: 378 GGAGLNDGSDLIESIEKFALKTTHALELSKRSLHDVPEEIFKMAAECDANTIDLSKNALE 437

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           ++   L     P + +        N      T     + +ATRL+     L L    LS 
Sbjct: 438 SVPKGL-EAACPVVTEL-------NLSFNKLTALPGFLCLATRLTF----LDLRNNQLSD 485

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFS 410
           +P E+     + ++ LS N    +P  ++S  SL++ F+
Sbjct: 486 LPGEMSVLSNVREVSLSFNRFSRIPEVVTSWQSLEILFA 524



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 163/352 (46%), Gaps = 46/352 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++ N ++ + P EV +              + L+ L L  N +  L  D+  +  L  L
Sbjct: 264 LHVGNNAMEEFPIEVIETL------------LSLKTLDLKSNKLSTLSPDITMIQGLERL 311

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S+N L+ LP  +G L  LK L V  N +  I  +I     +       ++L E P   
Sbjct: 312 DLSNNNLASLPYELGTLVHLKGLGVEGNPLRAIRRDIVKRGTVHLLKWLQDRLGESPEGA 371

Query: 134 GR-----CLNLSD------------------FKASNNCITSLPEDL----ADCSKMSKLD 166
            R        L+D                   + S   +  +PE++    A+C   + +D
Sbjct: 372 ARKRLSGGAGLNDGSDLIESIEKFALKTTHALELSKRSLHDVPEEIFKMAAECDA-NTID 430

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N L  +   L A+  ++TEL  S N L  +P  +   +RL  LDL  N++  +P  +
Sbjct: 431 LSKNALESVPKGLEAACPVVTELNLSFNKLTALPGFLCLATRLTFLDLRNNQLSDLPGEM 490

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDL 282
           S   ++ E  +  N  S +P  +     L  L    N+++E  ++  QL+    ++VLDL
Sbjct: 491 SVLSNVREVSLSFNRFSRIPEVVTSWQSLEILFASDNKIEE--LDTTQLQKLKHIAVLDL 548

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            NNS+  +PPE+G M  LR L L GNP R  R ++++  TPALL++LR R+P
Sbjct: 549 RNNSIRQVPPELGNMRQLRSLQLEGNPFRNPRPAILSKGTPALLEFLRDRIP 600


>gi|301112346|ref|XP_002905252.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262095582|gb|EEY53634.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 785

 Score =  181 bits (460), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 139/441 (31%), Positives = 216/441 (48%), Gaps = 38/441 (8%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M R L+ AR SGSLNLS+R     PNEV++ +DE  E +  WE   L+KL L++N I +L
Sbjct: 25  MARTLRLARQSGSLNLSSRDFHVFPNEVFRLYDELDEDEHSWECAVLKKLDLSYNEIAEL 84

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKF 119
             ++  L  L  L + HN L +LP  +  L  L SLD+S N +   +P+++G    L + 
Sbjct: 85  PNEVETLKYLVSLKMRHNHLRQLPLTLWSLETLTSLDLSNNELEGCLPEQLGKLDKLREL 144

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
               N+L +LP S+G  ++L   +  +N + +LP  +     +  L    N++  L    
Sbjct: 145 GLEGNKLTQLPESIGGLVHLEVLRVESNQLKALPSTIGKLRNLKTLTAHSNQIAALP--- 201

Query: 180 IASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
            AS+  LT L+     KN L    +    L+ +  +DL QN++   P+       L + +
Sbjct: 202 -ASFNSLTGLLTLDLKKNCLATTGDAFLELTAVKYIDLRQNKLEIFPTLPENNSCLDQLF 260

Query: 237 MGNNALSALPAE--LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
           +G N L  +P E  L     L  LD+  N+L+       QL RL  LD++NN L  LPP 
Sbjct: 261 LGFNLLRDVPQEVVLSVKESLTVLDVRDNKLQRLSDGIPQLYRLKTLDVTNNDLFDLPPG 320

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-------NEDSEASTTKE 346
            G +  L  LL+ GNPLR++R S+++  T  L KYLR+R           E+ +    ++
Sbjct: 321 FGYLKYLTHLLVEGNPLRSIRRSIISAGTEPLKKYLRTRGKPPVGVDAMEEEVDEFAIRQ 380

Query: 347 DLI----TMAT----------RLSVTSKELSLEGMNLSAIPSEIWEAGE------ITKLD 386
           ++I     MA           R +  S  L L  M L  +P ++  AG+      + +L+
Sbjct: 381 EVIEQDEPMAEEPPLEDEYLFRNAAASGNLQLVDMKLQNLPYQLHAAGKHRFGESLLQLN 440

Query: 387 LSRNSIQELPPELSSCASLQV 407
           LS+N + ELP       SLQ 
Sbjct: 441 LSKNWLVELPATAGQLTSLQT 461



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 19/222 (8%)

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L++ + S N L ELP++ G+  +L    A    + S+   +A   ++  L +  N LT 
Sbjct: 435 SLLQLNLSKNWLVELPATAGQLTSLQTLTAEQCGLKSVHASIAMLPRLEHLRLSKNSLTT 494

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
                      +T ++AS           G  S L  LDL  N +  IP ++    ++  
Sbjct: 495 ---------DAVTAMLASGT-------RAGISSSLKELDLRNNVLTDIPQNLQNLQAMDT 538

Query: 235 FYMGNNALSALPA-ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 292
             +  N +  L       +S+L  L +  N+L E C    Q  +L+ L L NN L  +P 
Sbjct: 539 LLLSFNRIKGLNGFPWSSMSQLSVLSIAHNRL-ESCGTVYQAPKLTSLSLENNELRQIPA 597

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           E      LR L L GNP R +R+ ++N  T A+LKYLR+RLP
Sbjct: 598 EFALCENLRALYLGGNPQRGIRAHILNSGTEAVLKYLRNRLP 639



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 89/218 (40%), Gaps = 22/218 (10%)

Query: 53  AHNNIEKLKEDLRNLPL-------------LTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           A  N++ +   L+NLP              L  LN+S N L ELPA  G+L  L++L   
Sbjct: 406 ASGNLQLVDMKLQNLPYQLHAAGKHRFGESLLQLNLSKNWLVELPATAGQLTSLQTLTAE 465

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELP--------SSLGRCLNLSDFKASNNCITS 151
              +  +   I     L     S N L            +  G   +L +    NN +T 
Sbjct: 466 QCGLKSVHASIAMLPRLEHLRLSKNSLTTDAVTAMLASGTRAGISSSLKELDLRNNVLTD 525

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           +P++L +   M  L +  N++  L+    +S + L+ L  + N L     T+    +L  
Sbjct: 526 IPQNLQNLQAMDTLLLSFNRIKGLNGFPWSSMSQLSVLSIAHNRLESC-GTVYQAPKLTS 584

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
           L L  N +  IP+  + C +L   Y+G N    + A +
Sbjct: 585 LSLENNELRQIPAEFALCENLRALYLGGNPQRGIRAHI 622


>gi|421097204|ref|ZP_15557898.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410799695|gb|EKS01761.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 671

 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 140/408 (34%), Positives = 207/408 (50%), Gaps = 31/408 (7%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           L+LS+  L+ +P E+   KN  E        +A+        +L++L L+ N +E L ED
Sbjct: 50  LDLSSNKLKTLPKEIGKLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNKLEALPED 109

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + NL  L  L++ +N+L  LP  IG+L  L+ L +S N +  +P++IG+   L   D S 
Sbjct: 110 IGNLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSR 169

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQLK LP  +G+  NL +   S+N + +LPED+ +   +  LD+  NKL  L    I   
Sbjct: 170 NQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEALPKE-IGKL 228

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L +L  S N L  +PE IG L  L  LDL  N++ ++P  I    +L E ++ NN L 
Sbjct: 229 RNLPKLDLSHNQLETLPEEIGQLQNLQILDLRYNQLETLPEEIGQLQNLRELHLYNNKLK 288

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
           ALP E+GKL  L TL+L +N+L+    E   L+ L  L+L  N L  LP EIGK+  L +
Sbjct: 289 ALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLKNLRTLNLQYNPLKTLPEEIGKLQNLPE 348

Query: 303 LLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L L+ N L  L      L N P          +L  + +   +  KE  I     L    
Sbjct: 349 LDLSHNKLEALPKEIGQLQNLP----------KLDLSHNQLQALPKE--IGQLQNL---- 392

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +EL L    L  +P EI +   +  LDLS N ++ LP E+    +LQ+
Sbjct: 393 RELHLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQI 440



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/400 (33%), Positives = 192/400 (48%), Gaps = 36/400 (9%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+L N  L+ +P E+ K               +L+ L L+ N +E L E++ NL  L  
Sbjct: 279 ELHLYNNKLKALPKEIGK-------------LKNLRTLNLSTNKLEALPEEIGNLKNLRT 325

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+ +N L  LP  IG+L  L  LD+S N +  +P EIG    L K D S NQL+ LP  
Sbjct: 326 LNLQYNPLKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKE 385

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +    NN + +LPE++     +  LD+  NKL  L    I     L  L   
Sbjct: 386 IGQLQNLRELHLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPKE-IGQLQNLQILDLR 444

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L+L  N++ ++P  I    +L +  +  N L  LP E+GKL
Sbjct: 445 YNQLEALPKEIGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKL 504

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L  NQLK    +  +L+ L  LDL NN L  LP EIGK+  L++L L  N L 
Sbjct: 505 KNLQKLNLQYNQLKTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYNKLE 564

Query: 312 TLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           TL         P  +  LR+     L  N+        E L+ +        ++L L G 
Sbjct: 565 TL---------PKEIGKLRNLKILYLSHNQLQALPKEIEKLVNL--------RKLYLSGN 607

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            L A+P EI +   +  LDL  N ++ LP ++    SLQ 
Sbjct: 608 QLQALPKEIGKLQNLQGLDLGNNPLKTLPKDIGKLKSLQT 647



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 204/429 (47%), Gaps = 56/429 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+ K               +LQ+L L+ N +E L ED+ NL  L +L
Sbjct: 165 LDLSRNQLKTLPEEIGK-------------LQNLQELYLSDNKLEALPEDIGNLKNLQIL 211

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S NKL  LP  IG+L  L  LD+S N +  +P+EIG    L   D   NQL+ LP  +
Sbjct: 212 DLSRNKLEALPKEIGKLRNLPKLDLSHNQLETLPEEIGQLQNLQILDLRYNQLETLPEEI 271

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-------------- 179
           G+  NL +    NN + +LP+++     +  L++  NKL  L   +              
Sbjct: 272 GQLQNLRELHLYNNKLKALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLKNLRTLNLQYN 331

Query: 180 --------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                   I     L EL  S N L  +P+ IG L  L +LDL  N++ ++P  I    +
Sbjct: 332 PLKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEIGQLQN 391

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L E ++ NN L  LP E+GKL  L  LDL  N+L+    E  QL+ L +LDL  N L  L
Sbjct: 392 LRELHLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLRYNQLEAL 451

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EIGK+  L++L L  N L  L   +        LK L+           +     L T
Sbjct: 452 PKEIGKLQNLQELNLRYNKLEALPKEI------GKLKNLQK---------LNLQYNQLKT 496

Query: 351 MATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ-- 406
           +   +      ++L+L+   L  +P +I +   + +LDL  N ++ LP E+    +LQ  
Sbjct: 497 LPKEIGKLKNLQKLNLQYNQLKTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQEL 556

Query: 407 -VKFSDLVT 414
            ++++ L T
Sbjct: 557 NLRYNKLET 565



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 174/361 (48%), Gaps = 42/361 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS--------- 122
           VL++S NKL  LP  IG+L  L+ LD+S N +  +P++IG    L +   S         
Sbjct: 49  VLDLSSNKLKTLPKEIGKLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNKLEALPE 108

Query: 123 --------------SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
                         +NQLK LP  +G+  NL +   S+N + +LPED+ +   +  LD+ 
Sbjct: 109 DIGNLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLS 168

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+L  L    I     L EL  S N L  +PE IG+L  L  LDL +N++ ++P  I  
Sbjct: 169 RNQLKTLPEE-IGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEALPKEIGK 227

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             +L +  + +N L  LP E+G+L  L  LDL  NQL+    E  QL+ L  L L NN L
Sbjct: 228 LRNLPKLDLSHNQLETLPEEIGQLQNLQILDLRYNQLETLPEEIGQLQNLRELHLYNNKL 287

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             LP EIGK+  LR L L+ N L  L   + N      LK LR+          +     
Sbjct: 288 KALPKEIGKLKNLRTLNLSTNKLEALPEEIGN------LKNLRT---------LNLQYNP 332

Query: 348 LITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           L T+   +       EL L    L A+P EI +   + KLDLS N +Q LP E+    +L
Sbjct: 333 LKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEIGQLQNL 392

Query: 406 Q 406
           +
Sbjct: 393 R 393



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/310 (35%), Positives = 162/310 (52%), Gaps = 18/310 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK  RT   LNL    L+ +P E+ K               +L +L L+HN +E L +++
Sbjct: 320 LKNLRT---LNLQYNPLKTLPEEIGK-------------LQNLPELDLSHNKLEALPKEI 363

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L++SHN+L  LP  IG+L  L+ L +  N +  +P+EIG    L   D S N
Sbjct: 364 GQLQNLPKLDLSHNQLQALPKEIGQLQNLRELHLYNNQLETLPEEIGKLQNLQILDLSHN 423

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L+ LP  +G+  NL       N + +LP+++     + +L++  NKL  L    I    
Sbjct: 424 KLEALPKEIGQLQNLQILDLRYNQLEALPKEIGKLQNLQELNLRYNKLEALPKE-IGKLK 482

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L +L    N L  +P+ IG L  L +L+L  N++ ++P  I    +L E  + NN L  
Sbjct: 483 NLQKLNLQYNQLKTLPKEIGKLKNLQKLNLQYNQLKTLPKDIGKLKNLRELDLRNNQLKT 542

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+GKL  L  L+L  N+L+    E  +LR L +L LS+N L  LP EI K+  LRKL
Sbjct: 543 LPKEIGKLQNLQELNLRYNKLETLPKEIGKLRNLKILYLSHNQLQALPKEIEKLVNLRKL 602

Query: 304 LLTGNPLRTL 313
            L+GN L+ L
Sbjct: 603 YLSGNQLQAL 612



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 140/288 (48%), Gaps = 38/288 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS+  L  +P E+              +  +LQ L L +N +E L +++  L  L  L
Sbjct: 418 LDLSHNKLEALPKEI-------------GQLQNLQILDLRYNQLEALPKEIGKLQNLQEL 464

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+ +NKL  LP  IG+L  L+ L++ +N +  +P EIG    L K +   NQLK LP  +
Sbjct: 465 NLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKLKNLQKLNLQYNQLKTLPKDI 524

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL +    NN + +LP+++     + +L++  NKL  L                  
Sbjct: 525 GKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYNKLETL------------------ 566

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+ IG L  L  L L  N++ ++P  I    +L + Y+  N L ALP E+GKL 
Sbjct: 567 ------PKEIGKLRNLKILYLSHNQLQALPKEIEKLVNLRKLYLSGNQLQALPKEIGKLQ 620

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
            L  LDL +N LK    +  +L+ L  L L N  L  LP EIGK+  L
Sbjct: 621 NLQGLDLGNNPLKTLPKDIGKLKSLQTLCLDNKQLESLPIEIGKLGEL 668


>gi|221117516|ref|XP_002157758.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Hydra
           magnipapillata]
          Length = 608

 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/342 (37%), Positives = 189/342 (55%), Gaps = 13/342 (3%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFD------EAGEGD-KWWEAVDLQKLILAHN 55
           +LK+AR +G LNLS RSL++VP +V++ N D        GE D +WW+ VDL+KLILA N
Sbjct: 30  LLKSARHTGQLNLSGRSLKEVPLDVWRINLDIPSQTISLGEVDERWWDQVDLKKLILASN 89

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
            I+ +  +++ LP L VL+   N +  L   I EL  L  L +S N +  +PD +  ATA
Sbjct: 90  EIKCIPNEVKYLPALNVLDAHDNCIEYLSDEISELKELGKLHLSHNKLTSLPDSLCQATA 149

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L     + N L+ LP + G  +NL +   S+N +TSLPE      ++ KLD+  N LT L
Sbjct: 150 LKVLLLAGNSLQSLPVNFGFLINLEELDLSDNKLTSLPESFGSLVQIKKLDLSKNLLTSL 209

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
            N+   S   L  L  S N L  +P+  G L+ L   +   N +++  ++     ++ + 
Sbjct: 210 PNSF-DSLKSLINLNLSTNKLTVLPKGFGKLTSLEIFECSYN-LITTFTTFDDQTNIKQL 267

Query: 236 YMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 293
           ++G N +  +      K+  L +L L  N + E      +LR L   DLSNNSLS LP  
Sbjct: 268 FLGYNRIQKIEDNAFEKMQSLVSLSLRDNAISEIPESFTKLRTLERADLSNNSLSTLPNA 327

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           +GKM  L+ L L GN +R++R  +V+  T A+L YL+SRLPE
Sbjct: 328 VGKM-NLKSLTLDGNSMRSIRRDIVDRGTNAILAYLKSRLPE 368



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 171/332 (51%), Gaps = 36/332 (10%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E + + +   L  L L  N I ++ E    L  L   ++S+N LS LP A+G+++ LKSL
Sbjct: 278 EDNAFEKMQSLVSLSLRDNAISEIPESFTKLRTLERADLSNNSLSTLPNAVGKMN-LKSL 336

Query: 97  DVSFNSIMKIPDEI---GSATALVKFDCSSNQLK------ELPSSLGRCLNLSD----FK 143
            +  NS+  I  +I   G+   L        + K      ++P S+ + +N +D     +
Sbjct: 337 TLDGNSMRSIRRDIVDRGTNAILAYLKSRLPEEKVPDEEIKIPKSVSK-VNDNDQQKKIQ 395

Query: 144 ASNNCIT-----SLPEDLADC--------------SKMSKLDVEGNKLTVLSNNLIASWT 184
            +N  +T     +  ++L+                +++SK+ ++ N LTV    ++   +
Sbjct: 396 ENNKAVTDQFLIATTKNLSFSGGSGSIPSSFWLPGAQISKISIQHNGLTVYPLEIMNYAS 455

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L+EL  S N L+ + +T+  L++L+ LDL  N + S+PSSIS    L E  +  N  S+
Sbjct: 456 TLSELDISHNKLSNILDTVNILTKLVFLDLSHNVLSSLPSSISQLEHLLEVVLSFNKYSS 515

Query: 245 LPAELGKLSKLGTLDLHSNQLKEY-CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
           +P  L K  KL TL L +NQ+ +   V   +++ L  LDLSNN+++ +PP++G +  L+ 
Sbjct: 516 IPPCLFKCKKLQTLLLSNNQITDIDVVGLLEMKCLRTLDLSNNNIACVPPQLGNVEWLQS 575

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L L GNP R  R+ ++   T  LL YLR R+P
Sbjct: 576 LNLDGNPFRNPRAQILMKGTQNLLAYLRDRIP 607


>gi|45656721|ref|YP_000807.1| lipoprotein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|421102937|ref|ZP_15563539.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599957|gb|AAS69444.1| putative lipoprotein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|410367252|gb|EKP22638.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
          Length = 521

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 209/397 (52%), Gaps = 21/397 (5%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           +V  E Y++  +A         +D++ LIL+   +  L ++++ L  L +L++ HN+L+ 
Sbjct: 31  EVEPEAYQDLTKA-----LQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTA 85

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ LD+SFNS+  +P E+G    L + + +S +L  LP  +G+  NL + 
Sbjct: 86  LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQEL 145

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             S N +T+LP+++     + +L++   KLT L    I     L EL  S N L  +P+ 
Sbjct: 146 DLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKE-IGQLRNLQELDLSFNSLTTLPKE 204

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           +G L  L RL+L+  ++ ++P  I    +L E  +  N+L+ LP E+G+L  L  LDLH 
Sbjct: 205 VGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQ 264

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS---SLV 318
           N+L    +E  QL+ L  LDL++N L+ LP EI ++  L++L L  N L TL      L 
Sbjct: 265 NRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 324

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---------LSLEGMNL 369
           N  T  L+    + LP+ E  E    K  L  +  +L+   KE         L L    +
Sbjct: 325 NLKTLNLIVTQLTTLPK-EIGELQNLK-TLNLLDNQLTTLPKEIGELQNLEILVLRENRI 382

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +A+P EI +   + +LDL +N +  LP E+    +LQ
Sbjct: 383 TALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQ 419



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 124/372 (33%), Positives = 192/372 (51%), Gaps = 12/372 (3%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N++  L +++  L  L  LN++  KL+ LP  IG+L  L+ LD+SFNS+  
Sbjct: 95  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTT 154

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+G    L + + +S +L  LP  +G+  NL +   S N +T+LP+++     + +L
Sbjct: 155 LPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 214

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++   KLT L    I     L EL  S N L  +P+ +G L  L RLDLHQNR+ ++P  
Sbjct: 215 NLNSQKLTTLPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPME 273

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E  + +N L+ LP E+ +L  L  LDLH NQL     E  QL+ L  L+L  
Sbjct: 274 IGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIV 333

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENEDSEA 341
             L+ LP EIG++  L+ L L  N L TL   +       +L    +R   LP+      
Sbjct: 334 TQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQ 393

Query: 342 STTKEDL-----ITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
           +  + DL      T+   +      +EL L+   L+ +P EI +   +  LDL  N +  
Sbjct: 394 NLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTT 453

Query: 395 LPPELSSCASLQ 406
           LP E+    +LQ
Sbjct: 454 LPKEIGQLQNLQ 465



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 169/325 (52%), Gaps = 40/325 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+++ L  +P E+              +  +LQ+L L+ N++  L +++  L  L  L
Sbjct: 168 LNLNSQKLTTLPKEI-------------GQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 214

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N++  KL+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + D   N+L  LP  +
Sbjct: 215 NLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEI 274

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT-ELIAS 192
           G+  NL +   ++N +T+LP+++     + +LD+  N+LT L   +     + T  LI +
Sbjct: 275 GQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVT 334

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +  L  +P+ IG L  L  L+L  N++ ++P  I    +L    +  N ++ALP E+G+L
Sbjct: 335 Q--LTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQL 392

Query: 253 SKLGTLDLHSNQL-------------KEYCVEACQL-----------RLSVLDLSNNSLS 288
             L  LDLH NQL             +E C++  QL            L VLDL NN L+
Sbjct: 393 QNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLT 452

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTL 313
            LP EIG++  L++L L  N L T 
Sbjct: 453 TLPKEIGQLQNLQELCLDENQLTTF 477



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 24/175 (13%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  LN+  N+L+ LP  IGEL  L+ L +  N I  +P EIG    L + D   NQL  L
Sbjct: 349 LKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTL 408

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G+  NL +     N +T+LP+++     +  LD++ N+LT L              
Sbjct: 409 PKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTL-------------- 454

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
                     P+ IG L  L  L L +N++ + P  I    +L E ++  N LS+
Sbjct: 455 ----------PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 499


>gi|348686389|gb|EGZ26204.1| hypothetical protein PHYSODRAFT_555679 [Phytophthora sojae]
          Length = 785

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/434 (30%), Positives = 208/434 (47%), Gaps = 32/434 (7%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           L+ AR SGSLNLS+R  +  P EV++ ++  GE ++ WE   L+KL L++N+I +L   +
Sbjct: 28  LRLARQSGSLNLSSRDFQSFPEEVFRLYELLGEDERSWECAVLRKLDLSYNDISELPTQV 87

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDCSS 123
             L  L    + HN+L  LP A+  L  L SLD+S N +   +P+++G    L +     
Sbjct: 88  ETLKYLVSFKMRHNRLRHLPLAVWNLETLTSLDLSNNELEGCLPEQLGKLDKLRELGLEG 147

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L +LP  +G   +L   K  +N + +LP  +     +  L    N +  L  +   S 
Sbjct: 148 NKLTKLPECIGGLSHLEVLKVESNQLRTLPSTIGQLRNLKTLSAHSNLIVELPASF-GSL 206

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
           T L  L   KN L    +    L  +  +DL QN++   P       SL + ++G N L 
Sbjct: 207 TGLLTLDLKKNSLVTTGDAFIGLVSIKFIDLRQNKLEVFPMLPENNSSLDQLFLGFNTLR 266

Query: 244 ALPAE--LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 300
            +P E  L     L  LD+  N+L+    +  QL RL  LD++NN L  LP  +G +  L
Sbjct: 267 EIPEEIVLNVKESLTVLDVRDNKLQRLSGKIPQLYRLKTLDVTNNDLHDLPAGLGYLKYL 326

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL----- 355
             LL+ GNPLR++R S+++G T  L KYLR+R    E  +A   + D  T+  R      
Sbjct: 327 DHLLVDGNPLRSVRRSIISGGTEPLKKYLRTRGGPPEGVDAMEEEVDEFTIRQREIEQDE 386

Query: 356 ----------------SVTSKELSLEGMNLSAIPSEIWEAGE------ITKLDLSRNSIQ 393
                           +  S  L L  M    +P ++  AG+      + +L+LS+N + 
Sbjct: 387 PMAEEPPAEDEYLFRNAAASGSLQLVDMKFQQLPVQLGAAGKYRFGETLLQLNLSKNHLV 446

Query: 394 ELPPELSSCASLQV 407
           ELP  +    SL+ 
Sbjct: 447 ELPVAIGELTSLRT 460



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 119/267 (44%), Gaps = 45/267 (16%)

Query: 85  AAIGELHMLKSLDVSFNSIMKIPDEIGSA------TALVKFDCSSNQLKELPSSLGRCLN 138
           AA G L ++   D+ F    ++P ++G+A        L++ + S N L ELP ++G   +
Sbjct: 404 AASGSLQLV---DMKFQ---QLPVQLGAAGKYRFGETLLQLNLSKNHLVELPVAIGELTS 457

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT--------VLSNNLIASWTM-LTEL 189
           L    A    + S+   +A    + +L V  N LT        V  NN  AS  + L EL
Sbjct: 458 LRTLVAEQCGLKSIHPSIAMIPSLERLRVGKNSLTTDAIDAMLVAGNN--ASICLSLKEL 515

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N+L  +P+ +  L  +  L L  NRI                     AL   P   
Sbjct: 516 DLRNNILTDIPQKLQYLETMDTLLLSFNRI--------------------RALDRFP--W 553

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
             + +L  L +  N+L+         +L+ L L NN L  +P E+     LR L L GNP
Sbjct: 554 SSMQQLSVLSISDNRLESLGAVHQIPKLTSLSLENNELRQIPAELALCENLRALYLAGNP 613

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPEN 336
            R +R+ ++N  T A+LKYLR+RLP +
Sbjct: 614 QRGIRTHILNNGTEAVLKYLRNRLPPD 640



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 9/176 (5%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE---- 128
           LN+S N L ELP AIGEL  L++L      +  I   I    +L +     N L      
Sbjct: 438 LNLSKNHLVELPVAIGELTSLRTLVAEQCGLKSIHPSIAMIPSLERLRVGKNSLTTDAID 497

Query: 129 ----LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
                 ++   CL+L +    NN +T +P+ L     M  L +  N++  L     +S  
Sbjct: 498 AMLVAGNNASICLSLKELDLRNNILTDIPQKLQYLETMDTLLLSFNRIRALDRFPWSSMQ 557

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            L+ L  S N L  +   +  + +L  L L  N +  IP+ ++ C +L   Y+  N
Sbjct: 558 QLSVLSISDNRLESL-GAVHQIPKLTSLSLENNELRQIPAELALCENLRALYLAGN 612



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 108/246 (43%), Gaps = 19/246 (7%)

Query: 182 SW--TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           SW   +L +L  S N ++ +P  + +L  L+   +  NR+  +P ++    +L    + N
Sbjct: 64  SWECAVLRKLDLSYNDISELPTQVETLKYLVSFKMRHNRLRHLPLAVWNLETLTSLDLSN 123

Query: 240 NALSA-LPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGK 296
           N L   LP +LGKL KL  L L  N+L +   C+      L VL + +N L  LP  IG+
Sbjct: 124 NELEGCLPEQLGKLDKLRELGLEGNKLTKLPECIGGLS-HLEVLKVESNQLRTLPSTIGQ 182

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L+ L    N +  L +S   G    LL        + + +   TT +  I +     
Sbjct: 183 LRNLKTLSAHSNLIVELPASF--GSLTGLLTL------DLKKNSLVTTGDAFIGL----- 229

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           V+ K + L    L   P        + +L L  N+++E+P E+       +   D+  NK
Sbjct: 230 VSIKFIDLRQNKLEVFPMLPENNSSLDQLFLGFNTLREIPEEIVLNVKESLTVLDVRDNK 289

Query: 417 ESCISG 422
              +SG
Sbjct: 290 LQRLSG 295


>gi|303282505|ref|XP_003060544.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458015|gb|EEH55313.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 782

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 208/419 (49%), Gaps = 68/419 (16%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           WWE  +L  L  + N I+ L + + +L  L  L+VSHN L+ LP    E   L+SLD S 
Sbjct: 159 WWERRELASLDASRNQIDSLPDRIASLTALEKLDVSHNVLTSLPGLALERLPLRSLDASG 218

Query: 101 NSIMKIPDEIGSATALVK--------FDCSSNQLKELP----SSLGRCLNLSD------- 141
           N I ++P  +   T   +        F     Q +  P    S L R   L D       
Sbjct: 219 NKIAELPLALPCETLARRRASWSSLFFRGVFFQTQLSPPLRKSHLHRASLLCDRRRNFAS 278

Query: 142 --FKASNNCITS--------------------LPEDLADCSKMSKLDVEGNKLTV----- 174
              K+S  C T+                    +P+ LA C ++  LD+ GN L       
Sbjct: 279 GVIKSSRRCRTTSARASGSRSSARRIAPSGARVPDSLARCHQLVSLDLSGNLLGAGLAPD 338

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L + L      + EL  S+N L+ +PE++G++ RL RLD  +N I  +P+S+ GC SLAE
Sbjct: 339 LPDALATGLVNVRELNVSRNRLSSLPESLGAMRRLARLDCRENEIRELPASVEGCDSLAE 398

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI 294
            Y+G+N L+ +P E+G ++ L TLD+ +N LKE       + LS+LD S N +  + PE+
Sbjct: 399 LYLGHNRLATIPDEIGFVASLRTLDVSNNALKELRPSLANVPLSLLDASGNDIVAVAPEL 458

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED----SEASTTK----- 345
           G+  TLRKL+L GNPL+++R +++ GPT  LL +LRS+L +  D    + A+  K     
Sbjct: 459 GRCVTLRKLMLEGNPLKSIRYNILAGPTRELLAHLRSKLSDERDDVNAAAAAFGKVFIGA 518

Query: 346 EDLITMATRLSVTSKELSLEG---------MNLSAIPSEIWE--AGEITKLDLSRNSIQ 393
           +D + +A+  +  +  ++ EG           +  +P E W+  A  +  +DL  N ++
Sbjct: 519 DDAVVIAS--ATHADRVAFEGGRGTLLLRDRGVERVPIEAWDIVATRVACVDLGLNGLK 575



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 162/409 (39%), Gaps = 82/409 (20%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V++++L ++ N +  L E L  +  L  L+   N++ ELPA++     L  L +  N + 
Sbjct: 348 VNVRELNVSRNRLSSLPESLGAMRRLARLDCRENEIRELPASVEGCDSLAELYLGHNRLA 407

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            IPDEIG   +L   D S+N LKEL  SL   + LS   AS N I ++  +L  C  + K
Sbjct: 408 TIPDEIGFVASLRTLDVSNNALKELRPSLAN-VPLSLLDASGNDIVAVAPELGRCVTLRK 466

Query: 165 LDVEGNKLTVLSNNLIASWT------MLTELIASKNLLNGMPETIGSL------SRLIRL 212
           L +EGN L  +  N++A  T      + ++L   ++ +N      G +      + +I  
Sbjct: 467 LMLEGNPLKSIRYNILAGPTRELLAHLRSKLSDERDDVNAAAAAFGKVFIGADDAVVIAS 526

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
             H +R+               F  G                 GTL L    ++   +EA
Sbjct: 527 ATHADRV--------------AFEGGR----------------GTLLLRDRGVERVPIEA 556

Query: 273 CQL---RLSVLDLSNNSLSG-----------LPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
             +   R++ +DL  N L G           L   +GK   L  LLL GN L +      
Sbjct: 557 WDIVATRVACVDLGLNGLKGDACGGGSNSDALATAVGKCKRLETLLLDGNDLSSWPLPHD 616

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMA---TRLSVTS---------------- 359
           N P    L  L   L  N     +     + + A   TRL ++                 
Sbjct: 617 NAPP---LPLLEMSLANNARVGGAVQTRGVFSRASNMTRLDLSGVVIAARFVDDGLLGPL 673

Query: 360 ---KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
               EL     +L+ +P +++   ++  L L  N I EL  E+S    L
Sbjct: 674 ANLVELRWARGDLTRVPEDVYWMRKLRALALPDNRIGELRAEVSELTQL 722



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 10/188 (5%)

Query: 156 LADCSKMSKLDVEGNKLT--VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR---LI 210
           +  C ++  L ++GN L+   L ++      +L   +A+   + G  +T G  SR   + 
Sbjct: 592 VGKCKRLETLLLDGNDLSSWPLPHDNAPPLPLLEMSLANNARVGGAVQTRGVFSRASNMT 651

Query: 211 RLDLHQNRILS--IPSSISG-CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           RLDL    I +  +   + G   +L E       L+ +P ++  + KL  L L  N++ E
Sbjct: 652 RLDLSGVVIAARFVDDGLLGPLANLVELRWARGDLTRVPEDVYWMRKLRALALPDNRIGE 711

Query: 268 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E  +L +L  LDL+NN L  LP E+G +  LR L + GN LR +R  ++   T ALL
Sbjct: 712 LRAEVSELTQLDELDLTNNDLPNLPAELG-LVPLRALKVEGNMLRMIRRPILERGTQALL 770

Query: 327 KYLRSRLP 334
           +YLR +LP
Sbjct: 771 EYLREKLP 778


>gi|255084227|ref|XP_002508688.1| predicted protein [Micromonas sp. RCC299]
 gi|226523965|gb|ACO69946.1| predicted protein [Micromonas sp. RCC299]
          Length = 518

 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 130/369 (35%), Positives = 199/369 (53%), Gaps = 20/369 (5%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E +D  +L L +N +  L  ++  L  L  LN+ HNKL+ELPA IG+L  L  L++  N 
Sbjct: 107 EELDSWELNLGNNRLTSLPAEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNR 166

Query: 103 IMKIPDEIGSATALVKFDCSSNQ-LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           +  +P EIG  T+LV+ +   N  L ELP+ +G+  +L +    NN +TSLP ++   + 
Sbjct: 167 LTSLPAEIGQLTSLVELNLDDNTPLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTS 226

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           + +L +  N+LT L    I     L EL   +N L  +P  IG L+ L RL LH+N++ S
Sbjct: 227 LKRLFLHRNQLTSLPAE-IGQLASLVELNLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTS 285

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P+ I    SL +  +  N L++LPAE+G+L  L  L L  NQL+    E  QL  L++L
Sbjct: 286 LPAEIGQLTSLVKLDLTTNKLTSLPAEIGQLESLRELRLSGNQLRSVPAEIGQLTSLTLL 345

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--RLPENED 338
           DL NN L+ +P EIG++T+L +L L GN L ++         PA +  L S  RL  + +
Sbjct: 346 DLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSM---------PAEIGQLASLKRLFLHRN 396

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
              S   E  I   T L +    L L G  L ++P+E  +   + +L L RN +  +P E
Sbjct: 397 QLTSMPAE--IGQLTSLEM----LHLGGNQLMSVPAEAGQLTSLKRLLLDRNQLTSVPAE 450

Query: 399 LSSCASLQV 407
           +    SL++
Sbjct: 451 IGQLTSLEM 459



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/381 (33%), Positives = 202/381 (53%), Gaps = 37/381 (9%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF--------- 100
           LIL H+ +  L  ++  L  L  L++S+N+L+ LPA IG+L  L  LD++          
Sbjct: 47  LILDHDELTSLPAEIGQLASLVELDLSYNQLTSLPAEIGQLTSLVKLDLTTWLEEPPSLL 106

Query: 101 ------------NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
                       N +  +P EIG  T+LV+ +   N+L ELP+ +G+  +L +    NN 
Sbjct: 107 EELDSWELNLGNNRLTSLPAEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNR 166

Query: 149 ITSLPEDLADCSKMSKLDVEGNK-LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
           +TSLP ++   + + +L+++ N  LT L    I   T L EL    N L  +P  IG L+
Sbjct: 167 LTSLPAEIGQLTSLVELNLDDNTPLTELPAE-IGQLTSLRELNLCNNRLTSLPAEIGQLT 225

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L RL LH+N++ S+P+ I    SL E  +  N L+++PAE+G+L+ L  L LH NQL  
Sbjct: 226 SLKRLFLHRNQLTSLPAEIGQLASLVELNLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTS 285

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E  QL  L  LDL+ N L+ LP EIG++ +LR+L L+GN LR++         PA +
Sbjct: 286 LPAEIGQLTSLVKLDLTTNKLTSLPAEIGQLESLRELRLSGNQLRSV---------PAEI 336

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
             L S    +  +   T+    I   T L     EL+L G +L+++P+EI +   + +L 
Sbjct: 337 GQLTSLTLLDLGNNQLTSMPAEIGQLTSLV----ELNLGGNHLTSMPAEIGQLASLKRLF 392

Query: 387 LSRNSIQELPPELSSCASLQV 407
           L RN +  +P E+    SL++
Sbjct: 393 LHRNQLTSMPAEIGQLTSLEM 413



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/305 (35%), Positives = 166/305 (54%), Gaps = 15/305 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL N  L  +P E+              +   L++L L  N +  L  ++  L  L  L
Sbjct: 207 LNLCNNRLTSLPAEI-------------GQLTSLKRLFLHRNQLTSLPAEIGQLASLVEL 253

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+L+ +PA IG+L  LK L +  N +  +P EIG  T+LVK D ++N+L  LP+ +
Sbjct: 254 NLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLTSLVKLDLTTNKLTSLPAEI 313

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L + + S N + S+P ++   + ++ LD+  N+LT +    I   T L EL    
Sbjct: 314 GQLESLRELRLSGNQLRSVPAEIGQLTSLTLLDLGNNQLTSMPAE-IGQLTSLVELNLGG 372

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  MP  IG L+ L RL LH+N++ S+P+ I    SL   ++G N L ++PAE G+L+
Sbjct: 373 NHLTSMPAEIGQLASLKRLFLHRNQLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLT 432

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  QL  L +L L  N L+ +P EIG++T+L  L L GN L +
Sbjct: 433 SLKRLLLDRNQLTSVPAEIGQLTSLEMLHLGGNQLTSVPAEIGQLTSLWTLHLGGNQLTS 492

Query: 313 LRSSL 317
           L +++
Sbjct: 493 LPAAI 497



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 130/408 (31%), Positives = 192/408 (47%), Gaps = 54/408 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNN-IEKLKEDLRNLPLLTV 72
           LNL N  L  +P E+              +   L +L L  N  + +L  ++  L  L  
Sbjct: 160 LNLGNNRLTSLPAEI-------------GQLTSLVELNLDDNTPLTELPAEIGQLTSLRE 206

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+ +N+L+ LPA IG+L  LK L +  N +  +P EIG   +LV+ +   NQL  +P+ 
Sbjct: 207 LNLCNNRLTSLPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLASLVELNLHRNQLTSVPAE 266

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  +L       N +TSLP ++   + + KLD+  NKLT L    I     L EL  S
Sbjct: 267 IGQLTSLKRLFLHRNQLTSLPAEIGQLTSLVKLDLTTNKLTSLPAE-IGQLESLRELRLS 325

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L+ L  LDL  N++ S+P+ I    SL E  +G N L+++PAE+G+L
Sbjct: 326 GNQLRSVPAEIGQLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIGQL 385

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           + L  L LH NQL     E  QL  L +L L  N L  +P E G++T+L++LLL  N L 
Sbjct: 386 ASLKRLFLHRNQLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLTSLKRLLLDRNQLT 445

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           ++         PA +  L S                            + L L G  L++
Sbjct: 446 SV---------PAEIGQLTSL---------------------------EMLHLGGNQLTS 469

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELS--SCASLQVKFSDLVTNKE 417
           +P+EI +   +  L L  N +  LP  +     A   V   D VT  E
Sbjct: 470 VPAEIGQLTSLWTLHLGGNQLTSLPAAIRDLGAADCSVHLDDGVTVDE 517



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/339 (34%), Positives = 177/339 (52%), Gaps = 24/339 (7%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           +N+  N+L+ LPA IG+L  LK L +  N +  +P EIG  T+L       ++L  LP+ 
Sbjct: 1   MNLICNQLTSLPAEIGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAE 60

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG---NKLTVLSNNLIASWTMLTEL 189
           +G+  +L +   S N +TSLP ++   + + KLD+        ++L    + SW    EL
Sbjct: 61  IGQLASLVELDLSYNQLTSLPAEIGQLTSLVKLDLTTWLEEPPSLLEE--LDSW----EL 114

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N L  +P  IG L+ L+ L+L  N++  +P+ I    SL E  +GNN L++LPAE+
Sbjct: 115 NLGNNRLTSLPAEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNRLTSLPAEI 174

Query: 250 GKLSKLGTLDLHSNQ-LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G+L+ L  L+L  N  L E   E  QL  L  L+L NN L+ LP EIG++T+L++L L  
Sbjct: 175 GQLTSLVELNLDDNTPLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFLHR 234

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L +L         PA +  L S +  N      T+    I   T L    K L L   
Sbjct: 235 NQLTSL---------PAEIGQLASLVELNLHRNQLTSVPAEIGQLTSL----KRLFLHRN 281

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            L+++P+EI +   + KLDL+ N +  LP E+    SL+
Sbjct: 282 QLTSLPAEIGQLTSLVKLDLTTNKLTSLPAEIGQLESLR 320



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 98/288 (34%), Positives = 148/288 (51%), Gaps = 18/288 (6%)

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ +G+  +L + +   N +TSLP ++   + ++ L ++ ++LT L    I   
Sbjct: 6   NQLTSLPAEIGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAE-IGQL 64

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL  S N L  +P  IG L+ L++LDL     L  P S+       E  +GNN L+
Sbjct: 65  ASLVELDLSYNQLTSLPAEIGQLTSLVKLDL--TTWLEEPPSLLEELDSWELNLGNNRLT 122

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           +LPAE+G+L+ L  L+L  N+L E   E  QL  L  L+L NN L+ LP EIG++T+L +
Sbjct: 123 SLPAEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNRLTSLPAEIGQLTSLVE 182

Query: 303 LLLTGN-PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           L L  N PL  L         PA +  L S    N  +   T+    I   T L    K 
Sbjct: 183 LNLDDNTPLTEL---------PAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSL----KR 229

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           L L    L+++P+EI +   + +L+L RN +  +P E+    SL+  F
Sbjct: 230 LFLHRNQLTSLPAEIGQLASLVELNLHRNQLTSVPAEIGQLTSLKRLF 277


>gi|301112348|ref|XP_002905253.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262095583|gb|EEY53635.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 702

 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 208/414 (50%), Gaps = 12/414 (2%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           R L+ AR +G L+L  R+L + P+ VY   +   + +K WE +DL K+ L+HN I  + +
Sbjct: 26  RALREARRTGVLSLPARNLIEFPSPVYHLEEHLEKDEKKWECIDLVKMDLSHNAIPSISD 85

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDC 121
           ++  L  +T + ++ N L  LP    ELH L  LD+S N + + + +  G+   L +   
Sbjct: 86  EIGGLTSVTSIKLTKNALQVLPEGFFELHALTYLDLSHNELEQNLSESFGALIGLKELGL 145

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S N+L  LP+S+    NL       N +T+LPE + +  K+  L+   N LT L ++  A
Sbjct: 146 SGNKLSHLPNSITLLENLEALHVDENKLTALPERIGNLHKLHVLNAHSNHLTALPSSFGA 205

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M   L   KN L    + + +L++L  LDL QN++   P+   G   L + ++G N 
Sbjct: 206 LRNM-QNLDLKKNRLESTGDALATLTKLKFLDLRQNKLAVFPALPEG-ADLDQVFLGYNT 263

Query: 242 LSAL--PAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMT 298
           LS +   + L     +  LD+  N+L       AC  RL  LD++NN LS LPP +G + 
Sbjct: 264 LSTINETSILRVKDSVTVLDMRDNKLANLPANIACLYRLKTLDVANNDLSDLPPGLGYLK 323

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L   ++ GNPLR +R ++++    +L KYLR+R       +    + D + +    +  
Sbjct: 324 HLNHFIVDGNPLRAIRRAVISAGCESLKKYLRTRGAPPAGVDVLEEERDELQIEREQAAA 383

Query: 359 SKELSLEGMNLSAIPSEIWEAGE------ITKLDLSRNSIQELPPELSSCASLQ 406
           S  + L   +L+ +P ++   G+      +  L+LS N ++ LP  +    SL+
Sbjct: 384 SGTMILMNNSLNVLPPDLVGQGQFDFGSTLFHLNLSSNQLRSLPAAIGELVSLK 437



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 153/365 (41%), Gaps = 73/365 (20%)

Query: 43  EAVDLQKLILAHNNIEKLKED--LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           E  DL ++ L +N +  + E   LR    +TVL++  NKL+ LPA I  L+ LK+LDV+ 
Sbjct: 250 EGADLDQVFLGYNTLSTINETSILRVKDSVTVLDMRDNKLANLPANIACLYRLKTLDVAN 309

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSL--GRCLNLSDFKASNNCITSLPEDLAD 158
           N +  +P  +G    L  F    N L+ +  ++    C +L  +  +     +  + L +
Sbjct: 310 NDLSDLPPGLGYLKHLNHFIVDGNPLRAIRRAVISAGCESLKKYLRTRGAPPAGVDVLEE 369

Query: 159 CSKMSKLDVE-----------GNKLTVLSNNLIASWTM-----LTELIASKNLLNGMPET 202
                +++ E            N L VL  +L+          L  L  S N L  +P  
Sbjct: 370 ERDELQIEREQAAASGTMILMNNSLNVLPPDLVGQGQFDFGSTLFHLNLSSNQLRSLPAA 429

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCC-----------------------------SLA 233
           IG L  L  L +  N + ++  SI+                                SL 
Sbjct: 430 IGELVSLKTLTVEDNELQALDPSIAALPHLELLRLRKNSLSAESISEFLGNSPALGDSLK 489

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE--------------YCVEACQLR--- 276
           E  + NN+L+ LP E+ +L  L TL L  N+L+                 V   +LR   
Sbjct: 490 ELDVRNNSLATLPVEISQLRSLETLLLGFNRLETLDRFPWSQLTKVSVVSVSDNKLRALG 549

Query: 277 -------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                  L+ L   NNSL+ +P E+G    LR + + GNP RT+R  ++   +  +L YL
Sbjct: 550 RIYDAPLLASLSFENNSLTKVPCELGLCPHLRAIYMNGNPQRTVRGGVIAKGSAEILAYL 609

Query: 330 RSRLP 334
           +++LP
Sbjct: 610 KNKLP 614



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 26/192 (13%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAVD--------LQKLILAHNNI--EKLK 61
           LNLS+  LR +P  + +  +       D   +A+D        L+ L L  N++  E + 
Sbjct: 416 LNLSSNQLRSLPAAIGELVSLKTLTVEDNELQALDPSIAALPHLELLRLRKNSLSAESIS 475

Query: 62  EDLRNLPLL----TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI--GSATA 115
           E L N P L      L+V +N L+ LP  I +L  L++L + FN +  + D       T 
Sbjct: 476 EFLGNSPALGDSLKELDVRNNSLATLPVEISQLRSLETLLLGFNRLETL-DRFPWSQLTK 534

Query: 116 LVKFDCSSNQLKELPSSLGRCLN---LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
           +     S N+L+    +LGR  +   L+     NN +T +P +L  C  +  + + GN  
Sbjct: 535 VSVVSVSDNKLR----ALGRIYDAPLLASLSFENNSLTKVPCELGLCPHLRAIYMNGNPQ 590

Query: 173 TVLSNNLIASWT 184
             +   +IA  +
Sbjct: 591 RTVRGGVIAKGS 602


>gi|255082904|ref|XP_002504438.1| predicted protein [Micromonas sp. RCC299]
 gi|226519706|gb|ACO65696.1| predicted protein [Micromonas sp. RCC299]
          Length = 487

 Score =  171 bits (432), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 190/356 (53%), Gaps = 18/356 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N +  +  ++  L  L +L + +N+LS +PA IG L  LK LD+  N +  +
Sbjct: 92  LDGLYLGKNQLTSVPAEIGQLTSLGLLGLDNNQLSSVPAEIGRLTALKGLDLQKNQLTSV 151

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T+L       N+L  +P+ +G+  +L     ++N +TS+P ++   + + +L 
Sbjct: 152 PAEVGQLTSLEALRLQHNRLTSVPAEIGQLASLEKLYVADNQLTSMPAEIWRLTSLRELY 211

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +E N+LT L    I    +L EL  + N L G+P  IG L+ L  L L+ N++ S+P+ I
Sbjct: 212 LEDNRLTSLPAE-IGQLALLKELWLNDNELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEI 270

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL E Y+  N L+++PAE+G+L+ L  L+L  NQL     E  QL  L  LDLS N
Sbjct: 271 GQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSGNQLTSVPAEIGQLTFLGCLDLSYN 330

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP EIG++ +LR L L  N L ++         PA +  LRS        E     
Sbjct: 331 YLTSLPAEIGQLMSLRLLDLDDNRLASV---------PAEIGQLRSL------RELFLNG 375

Query: 346 EDLITMATRLS-VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
             L ++   +  +T +EL LE   L+++P+E+ +   + +L+LSRN +  +P E+ 
Sbjct: 376 NLLTSVPAEIGQLTVRELYLENNQLTSVPAEVGQLAALEQLNLSRNKLTSVPAEIG 431



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 186/372 (50%), Gaps = 38/372 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S N+L+ +PA IG+L  L+ L ++ N +  +P EIG   +L +     NQL  LP+
Sbjct: 2   VLNLSGNQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLPA 61

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV---------------LS 176
            +G+  +L      +N +TS+P ++   + +  L +  N+LT                L 
Sbjct: 62  EIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLGLLGLD 121

Query: 177 NNLIAS-------WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           NN ++S        T L  L   KN L  +P  +G L+ L  L L  NR+ S+P+ I   
Sbjct: 122 NNQLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRLQHNRLTSVPAEIGQL 181

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            SL + Y+ +N L+++PAE+ +L+ L  L L  N+L     E  QL  L  L L++N L+
Sbjct: 182 ASLEKLYVADNQLTSMPAEIWRLTSLRELYLEDNRLTSLPAEIGQLALLKELWLNDNELT 241

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
           GLP EIG++T+LR L L GN L ++         PA +  L S           T+    
Sbjct: 242 GLPAEIGQLTSLRGLYLYGNQLTSV---------PAEIGQLMSLRELYLQGNQLTSVPAE 292

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
           I   T L V    L+L G  L+++P+EI +   +  LDLS N +  LP E+    SL  +
Sbjct: 293 IGQLTSLDV----LNLSGNQLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEIGQLMSL--R 346

Query: 409 FSDLVTNKESCI 420
             DL  N+ + +
Sbjct: 347 LLDLDDNRLASV 358



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 171/329 (51%), Gaps = 26/329 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L L +  L  VP E+              +   L+KL +A N +  +  ++  L  L  
Sbjct: 163 ALRLQHNRLTSVPAEI-------------GQLASLEKLYVADNQLTSMPAEIWRLTSLRE 209

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LPA IG+L +LK L ++ N +  +P EIG  T+L       NQL  +P+ 
Sbjct: 210 LYLEDNRLTSLPAEIGQLALLKELWLNDNELTGLPAEIGQLTSLRGLYLYGNQLTSVPAE 269

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+ ++L +     N +TS+P ++   + +  L++ GN+LT +    I   T L  L  S
Sbjct: 270 IGQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSGNQLTSVPAE-IGQLTFLGCLDLS 328

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L  L  LDL  NR+ S+P+ I    SL E ++  N L+++PAE+G+L
Sbjct: 329 YNYLTSLPAEIGQLMSLRLLDLDDNRLASVPAEIGQLRSLRELFLNGNLLTSVPAEIGQL 388

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN--- 308
           + +  L L +NQL     E  QL  L  L+LS N L+ +P EIG +T+LR LLL GN   
Sbjct: 389 T-VRELYLENNQLTSVPAEVGQLAALEQLNLSRNKLTSVPAEIGLLTSLRWLLLNGNQLT 447

Query: 309 -------PLRTLRSSLVNGPTPALLKYLR 330
                   L +LR   ++   PA ++ LR
Sbjct: 448 SVPGEIGQLTSLRLLFLSSGEPAAIRKLR 476


>gi|220907470|ref|YP_002482781.1| hypothetical protein Cyan7425_2057 [Cyanothece sp. PCC 7425]
 gi|219864081|gb|ACL44420.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 482

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 133/376 (35%), Positives = 193/376 (51%), Gaps = 35/376 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++LQ+L L +N + +L E + +L  L  LN++ N L +LP  I  L  LK L++  N + 
Sbjct: 32  INLQELSLENNQLTELPEAIGSLIQLQELNLASNLLIKLPKTISSLTQLKELNLRENQLA 91

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PDEIG  T L +   SSNQL  LP  +G    L +    +N +T LPE LA+ ++++ 
Sbjct: 92  DVPDEIGFLTQLQELWLSSNQLTHLPEMIGSLTQLQELFLYSNQLTDLPESLANLTRLNW 151

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +E N LTVL    I S T+L EL   +N L  +PE++GSL RL +LDL  N++  +P 
Sbjct: 152 LSLETNHLTVLPET-IGSLTLLNELDLKENQLTSLPESVGSLIRLKKLDLADNQLTHLPE 210

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--------- 275
           SI     L E  + NN L++LP  +G          H  QLKE CV   QL         
Sbjct: 211 SIGSLSRLNELCLCNNQLNSLPKSIG----------HLKQLKELCVCNNQLSNLPGSIGS 260

Query: 276 --RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
             RL  +DLS+N L+ LP  IG +T L  L L+GN L+ L  S+      +L + L   L
Sbjct: 261 LRRLRKIDLSDNQLTYLPESIGSLTQLYWLDLSGNQLKHLPESI-----GSLTQLLGLSL 315

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
             N+ +E  T    L  + +        L L    L+ IP  I +  E+  L+LSRN + 
Sbjct: 316 SNNQLTELPTAICSLTDLES--------LRLSDNQLTEIPESISDLTELEWLNLSRNQLT 367

Query: 394 ELPPELSSCASLQVKF 409
           ELP  +     L+  +
Sbjct: 368 ELPAAIGLLTELETFY 383



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/315 (34%), Positives = 157/315 (49%), Gaps = 12/315 (3%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDE----AGEGDKWWEAV----DLQKLILAHNNIEKLKED 63
           LNL    L DVP+E+       E    + +     E +     LQ+L L  N +  L E 
Sbjct: 83  LNLRENQLADVPDEIGFLTQLQELWLSSNQLTHLPEMIGSLTQLQELFLYSNQLTDLPES 142

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           L NL  L  L++  N L+ LP  IG L +L  LD+  N +  +P+ +GS   L K D + 
Sbjct: 143 LANLTRLNWLSLETNHLTVLPETIGSLTLLNELDLKENQLTSLPESVGSLIRLKKLDLAD 202

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP S+G    L++    NN + SLP+ +    ++ +L V  N+L+ L  + I S 
Sbjct: 203 NQLTHLPESIGSLSRLNELCLCNNQLNSLPKSIGHLKQLKELCVCNNQLSNLPGS-IGSL 261

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L ++  S N L  +PE+IGSL++L  LDL  N++  +P SI     L    + NN L+
Sbjct: 262 RRLRKIDLSDNQLTYLPESIGSLTQLYWLDLSGNQLKHLPESIGSLTQLLGLSLSNNQLT 321

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP  +  L+ L +L L  NQL E       L  L  L+LS N L+ LP  IG +T L  
Sbjct: 322 ELPTAICSLTDLESLRLSDNQLTEIPESISDLTELEWLNLSRNQLTELPAAIGLLTELET 381

Query: 303 LLLTGNPLRTLRSSL 317
             L+ N L  L  S+
Sbjct: 382 FYLSENQLTELPESI 396



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 160/328 (48%), Gaps = 48/328 (14%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L  N++  L E + +L LL  L++  N+L+ LP ++G L  LK LD++ N +  +P+ IG
Sbjct: 154 LETNHLTVLPETIGSLTLLNELDLKENQLTSLPESVGSLIRLKKLDLADNQLTHLPESIG 213

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           S + L +    +NQL  LP S+G    L +    NN +++LP  +    ++ K+D+  N+
Sbjct: 214 SLSRLNELCLCNNQLNSLPKSIGHLKQLKELCVCNNQLSNLPGSIGSLRRLRKIDLSDNQ 273

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH---------------- 215
           LT L  + I S T L  L  S N L  +PE+IGSL++L+ L L                 
Sbjct: 274 LTYLPES-IGSLTQLYWLDLSGNQLKHLPESIGSLTQLLGLSLSNNQLTELPTAICSLTD 332

Query: 216 -------QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE- 267
                   N++  IP SIS    L    +  N L+ LPA +G L++L T  L  NQL E 
Sbjct: 333 LESLRLSDNQLTEIPESISDLTELEWLNLSRNQLTELPAAIGLLTELETFYLSENQLTEL 392

Query: 268 ------------YCVEACQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
                         ++  QL           +L  L L NN L+ LP  IG +  L ++ 
Sbjct: 393 PESIGALIQLDWIFLDDNQLIKLPESFSSLIQLRRLYLENNQLTELPVAIGSLVQLEEIK 452

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           L GNPL +  +++    T A+L YLR++
Sbjct: 453 LNGNPLNSDLATVYAQGTSAVLAYLRAK 480



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 106/222 (47%), Gaps = 30/222 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+K+ L+ N +  L E + +L  L  L++S N+L  LP +IG L  L  L +S N + ++
Sbjct: 264 LRKIDLSDNQLTYLPESIGSLTQLYWLDLSGNQLKHLPESIGSLTQLLGLSLSNNQLTEL 323

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  I S T L     S NQL E+P S+     L     S N +T LP             
Sbjct: 324 PTAICSLTDLESLRLSDNQLTEIPESISDLTELEWLNLSRNQLTELP------------- 370

Query: 167 VEGNKLTVLSNNLIASWTMLTEL---IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
                         A+  +LTEL     S+N L  +PE+IG+L +L  + L  N+++ +P
Sbjct: 371 --------------AAIGLLTELETFYLSENQLTELPESIGALIQLDWIFLDDNQLIKLP 416

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            S S    L   Y+ NN L+ LP  +G L +L  + L+ N L
Sbjct: 417 ESFSSLIQLRRLYLENNQLTELPVAIGSLVQLEEIKLNGNPL 458



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 13/159 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN  L ++P  +                 DL+ L L+ N + ++ E + +L  L  L
Sbjct: 313 LSLSNNQLTELPTAICS-------------LTDLESLRLSDNQLTEIPESISDLTELEWL 359

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S N+L+ELPAAIG L  L++  +S N + ++P+ IG+   L       NQL +LP S 
Sbjct: 360 NLSRNQLTELPAAIGLLTELETFYLSENQLTELPESIGALIQLDWIFLDDNQLIKLPESF 419

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
              + L      NN +T LP  +    ++ ++ + GN L
Sbjct: 420 SSLIQLRRLYLENNQLTELPVAIGSLVQLEEIKLNGNPL 458



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 16/145 (11%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL LS+  L ++P  +              +  +L+ L L+ N + +L   +  L  L  
Sbjct: 335 SLRLSDNQLTEIPESIS-------------DLTELEWLNLSRNQLTELPAAIGLLTELET 381

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
             +S N+L+ELP +IG L  L  + +  N ++K+P+   S   L +    +NQL ELP +
Sbjct: 382 FYLSENQLTELPESIGALIQLDWIFLDDNQLIKLPESFSSLIQLRRLYLENNQLTELPVA 441

Query: 133 LGRCLNLSDFKASNNCITSLPEDLA 157
           +G  + L + K + N + S   DLA
Sbjct: 442 IGSLVQLEEIKLNGNPLNS---DLA 463



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 37/166 (22%)

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           +P  +G L++L  L +  NQL +     C L  L  L L NN L+ LP  IG +  L++L
Sbjct: 1   MPESIGSLTQLQKLGVSHNQLTQLPESICLLINLQELSLENNQLTELPEAIGSLIQLQEL 60

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N                    L  +LP+             I+  T+L    KEL+
Sbjct: 61  NLASN--------------------LLIKLPKT------------ISSLTQL----KELN 84

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           L    L+ +P EI    ++ +L LS N +  LP  + S   LQ  F
Sbjct: 85  LRENQLADVPDEIGFLTQLQELWLSSNQLTHLPEMIGSLTQLQELF 130


>gi|255070553|ref|XP_002507358.1| predicted protein [Micromonas sp. RCC299]
 gi|226522633|gb|ACO68616.1| predicted protein [Micromonas sp. RCC299]
          Length = 574

 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 186/361 (51%), Gaps = 38/361 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L+ N +  +  ++  L  L  L++ +N+L+ +PA IG+L  L+ L +  N +  +
Sbjct: 77  LTGLDLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSVPAEIGQLTSLEELCLDDNRLTSV 136

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+L +     NQL  +P+ +GR  +L +    +N +TS+P ++   + + KL+
Sbjct: 137 PAEIGQLTSLERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQLASLEKLN 196

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+LT +    I   T L EL  + N L  +P  IG L+ L  L L  N++ S+P+ I
Sbjct: 197 LNGNQLTSVPAE-IGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEI 255

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL + Y+G N L+++PAE+G+L+ L  L+L  NQL     E  QL  L VL L +N
Sbjct: 256 GQLASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDN 315

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ +P EIG++T+L +L L+GN L ++ + +              RL E          
Sbjct: 316 QLTSVPAEIGQLTSLTELYLSGNQLTSVPAEI-------------GRLTE---------- 352

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                         KEL L    L+++P EIW+   +  L L  N + ELP E+    SL
Sbjct: 353 -------------LKELGLRDNQLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIGQLTSL 399

Query: 406 Q 406
           +
Sbjct: 400 E 400



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 205/400 (51%), Gaps = 30/400 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL +  L  VP E+              +   L+KL L  N +  +  ++  L  L  L
Sbjct: 172 LNLKSNQLTSVPAEI-------------GQLASLEKLNLNGNQLTSVPAEIGQLTSLKEL 218

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +++ N+L+ +PA IG+L  LK L +  N +  +P EIG   +L K     NQL  +P+ +
Sbjct: 219 DLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEIGQLASLEKLYVGGNQLTSVPAEI 278

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L   +  +N +TS+P ++   + +  L ++ N+LT +    I   T LTEL  S 
Sbjct: 279 GQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDNQLTSVPAE-IGQLTSLTELYLSG 337

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L  L L  N++ S+P  I    SL   Y+ +N L  LPAE+G+L+
Sbjct: 338 NQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIGQLT 397

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  N+L     E  QL  L+ L L  N L+ +P EIG++T+L KL L+G  L +
Sbjct: 398 SLEELGLERNELTSVPAEIWQLTSLTELYLGCNQLTSVPAEIGQLTSLTKLYLSGTKLTS 457

Query: 313 LRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           +         PA +  L S R+     ++ ++   ++  +A+      +EL L G  L++
Sbjct: 458 V---------PAEIGQLTSLRVLYLYGNQLTSLPAEIGQLASL-----RELYLNGKQLTS 503

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           +P+EI +  E+ +LDL  N +  +P E+    SL+V + D
Sbjct: 504 VPAEIGQLTELKELDLRDNKLTSVPEEIWQLTSLRVLYLD 543



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 200/379 (52%), Gaps = 22/379 (5%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           +L L  N +  +  ++  L  L VL++ +N+L+ +PA IG+L  L  L +  N +  +P 
Sbjct: 10  ELALDGNELTSVPAEIGQLTSLEVLDLYNNQLTSVPAEIGQLTSLTELYLFGNQLTSVPA 69

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           EIG  T+L   D S NQL  +P+ +G+  +L +    NN +TS+P ++   + + +L ++
Sbjct: 70  EIGQLTSLTGLDLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSVPAEIGQLTSLEELCLD 129

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+LT +    I   T L  L    N L  +P  IG L+ L  L+L  N++ S+P+ I  
Sbjct: 130 DNRLTSVPAE-IGQLTSLERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQ 188

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             SL +  +  N L+++PAE+G+L+ L  LDL+ NQL     +  QL  L  L L +N L
Sbjct: 189 LASLEKLNLNGNQLTSVPAEIGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDNQL 248

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSL-----VNG---------PTPALLKYLRS-R 332
           + +P EIG++ +L KL + GN L ++ + +     + G           PA +  L S R
Sbjct: 249 TSVPAEIGQLASLEKLYVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSVPAEIWQLTSLR 308

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
           +   +D++ ++   + I   T L+    EL L G  L+++P+EI    E+ +L L  N +
Sbjct: 309 VLYLDDNQLTSVPAE-IGQLTSLT----ELYLSGNQLTSVPAEIGRLTELKELGLRDNQL 363

Query: 393 QELPPELSSCASLQVKFSD 411
             +P E+    SL+V + D
Sbjct: 364 TSVPEEIWQLTSLRVLYLD 382



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 166/338 (49%), Gaps = 35/338 (10%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           L+L+   L  VP ++ +  +  E G  D    +V         L+KL +  N +  +  +
Sbjct: 218 LDLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEIGQLASLEKLYVGGNQLTSVPAE 277

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  N+L+ +PA I +L  L+ L +  N +  +P EIG  T+L +   S 
Sbjct: 278 IGQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDNQLTSVPAEIGQLTSLTELYLSG 337

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDL-----------------------ADCS 160
           NQL  +P+ +GR   L +    +N +TS+PE++                          +
Sbjct: 338 NQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIGQLT 397

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            + +L +E N+LT +    I   T LTEL    N L  +P  IG L+ L +L L   ++ 
Sbjct: 398 SLEELGLERNELTSVPAE-IWQLTSLTELYLGCNQLTSVPAEIGQLTSLTKLYLSGTKLT 456

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
           S+P+ I    SL   Y+  N L++LPAE+G+L+ L  L L+  QL     E  QL  L  
Sbjct: 457 SVPAEIGQLTSLRVLYLYGNQLTSLPAEIGQLASLRELYLNGKQLTSVPAEIGQLTELKE 516

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           LDL +N L+ +P EI ++T+LR L L  N L ++ +++
Sbjct: 517 LDLRDNKLTSVPEEIWQLTSLRVLYLDDNQLTSVPAAI 554



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 147/286 (51%), Gaps = 15/286 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L L +  L  VP E+             W+   L+ L L  N +  +  ++  L  LT 
Sbjct: 286 GLELDDNQLTSVPAEI-------------WQLTSLRVLYLDDNQLTSVPAEIGQLTSLTE 332

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S N+L+ +PA IG L  LK L +  N +  +P+EI   T+L       N L ELP+ 
Sbjct: 333 LYLSGNQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTSLRVLYLDDNLLDELPAE 392

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  +L +     N +TS+P ++   + +++L +  N+LT +    I   T LT+L  S
Sbjct: 393 IGQLTSLEELGLERNELTSVPAEIWQLTSLTELYLGCNQLTSVPAE-IGQLTSLTKLYLS 451

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
              L  +P  IG L+ L  L L+ N++ S+P+ I    SL E Y+    L+++PAE+G+L
Sbjct: 452 GTKLTSVPAEIGQLTSLRVLYLYGNQLTSLPAEIGQLASLRELYLNGKQLTSVPAEIGQL 511

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
           ++L  LDL  N+L     E  QL  L VL L +N L+ +P  I ++
Sbjct: 512 TELKELDLRDNKLTSVPEEIWQLTSLRVLYLDDNQLTSVPAAIREL 557



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 16/203 (7%)

Query: 207 SRLIRLDL--HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            R++RL+L    N + S+P+ I    SL    + NN L+++PAE+G+L+ L  L L  NQ
Sbjct: 4   GRVVRLELALDGNELTSVPAEIGQLTSLEVLDLYNNQLTSVPAEIGQLTSLTELYLFGNQ 63

Query: 265 LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           L     E  QL  L+ LDLS N L+ +P E+G++T+LR+L L  N L ++         P
Sbjct: 64  LTSVPAEIGQLTSLTGLDLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSV---------P 114

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
           A +  L S      D    T+    I   T L    + L L G  L+++P+EI     + 
Sbjct: 115 AEIGQLTSLEELCLDDNRLTSVPAEIGQLTSL----ERLYLGGNQLTSVPAEIGRLTSLE 170

Query: 384 KLDLSRNSIQELPPELSSCASLQ 406
           +L+L  N +  +P E+   ASL+
Sbjct: 171 ELNLKSNQLTSVPAEIGQLASLE 193


>gi|359462280|ref|ZP_09250843.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 1235

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 211/405 (52%), Gaps = 29/405 (7%)

Query: 3   RILKAARTSG-SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           RI +A R +  +L+L +  L +VP E+              +  +L  L L+ N + ++ 
Sbjct: 13  RIAEAKRIAAPTLDLCSLKLTEVPKEIG-------------QLTNLIALSLSGNQLTEVP 59

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           +++  L  L  L++S N+L+E+P  IG+L  L  L +  N + ++P+EIG   +L +   
Sbjct: 60  KEIGKLTNLIALSLSGNQLTEVPKEIGKLANLTQLRLHQNRLTEVPEEIGQLASLTELSL 119

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
             NQL E+P  +G+ +NL++   S N +  +P+DL     ++KL +  N+LT     L  
Sbjct: 120 FQNQLTEVPKEIGQLINLTELYLSQNQLMKIPKDLERLISLTKLYLSQNQLTEAPKEL-G 178

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL  S+N L  +P+  G L+ LI+L+L QNR+  +P  +    SL E ++  N 
Sbjct: 179 KLINLMELYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQNK 238

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 300
           L  +P ELGKL+ L  L +  NQL E   E  QL +L+ L LS+N L  +P E+G++  L
Sbjct: 239 LMEVPKELGKLTNLTWLHIDQNQLTEIPEEIGQLTKLTELSLSHNQLKEVPKELGQLARL 298

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
            +  L+ N L  +   +       + K +  R+ +N+ +E       L+ + TRL +   
Sbjct: 299 TRFSLSQNQLIEIPKEI-----GKIAKLIWLRIDQNQLTEVPRELSQLVNL-TRLHLHQN 352

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +       L+ IP E+ +  ++T+L LS+N + E+P EL    +L
Sbjct: 353 Q-------LTKIPKELGKVTKLTELSLSQNQLIEVPKELGQLINL 390



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 201/405 (49%), Gaps = 48/405 (11%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS   L +VP E+ K               +L +L L  N + ++ E++  L  LT 
Sbjct: 70  ALSLSGNQLTEVPKEIGK-------------LANLTQLRLHQNRLTEVPEEIGQLASLTE 116

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+E+P  IG+L  L  L +S N +MKIP ++    +L K   S NQL E P  
Sbjct: 117 LSLFQNQLTEVPKEIGQLINLTELYLSQNQLMKIPKDLERLISLTKLYLSQNQLTEAPKE 176

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           LG+ +NL +   S N +T +P++    + + KL++  N+LT                   
Sbjct: 177 LGKLINLMELYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLT------------------- 217

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                G+P+ +G L  L  L L QN+++ +P  +    +L   ++  N L+ +P E+G+L
Sbjct: 218 -----GVPQELGELKSLTELHLSQNKLMEVPKELGKLTNLTWLHIDQNQLTEIPEEIGQL 272

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           +KL  L L  NQLKE   E  QL RL+   LS N L  +P EIGK+  L  L +  N L 
Sbjct: 273 TKLTELSLSHNQLKEVPKELGQLARLTRFSLSQNQLIEIPKEIGKIAKLIWLRIDQNQLT 332

Query: 312 TLR---SSLVNGPTPALLKYLRSRLPE-----NEDSEASTTKEDLITMATRLS--VTSKE 361
            +    S LVN     L +   +++P+      + +E S ++  LI +   L   +   E
Sbjct: 333 EVPRELSQLVNLTRLHLHQNQLTKIPKELGKVTKLTELSLSQNQLIEVPKELGQLINLVE 392

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L L    L+ +P E+ +   +T+L LS N + E+P EL   ASL+
Sbjct: 393 LRLNQNQLTKVPKELGKLTNLTRLHLSYNKLIEVPKELGKLASLR 437



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 204/410 (49%), Gaps = 33/410 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L    L +VP E+              + ++L +L L+ N + K+ +DL  L  LT L
Sbjct: 117 LSLFQNQLTEVPKEIG-------------QLINLTELYLSQNQLMKIPKDLERLISLTKL 163

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +S N+L+E P  +G+L  L  L +S N + ++P E G  T+L+K + S N+L  +P  L
Sbjct: 164 YLSQNQLTEAPKELGKLINLMELYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLTGVPQEL 223

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L++   S N +  +P++L   + ++ L ++ N+LT +    I   T LTEL  S 
Sbjct: 224 GELKSLTELHLSQNKLMEVPKELGKLTNLTWLHIDQNQLTEIPEE-IGQLTKLTELSLSH 282

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ +G L+RL R  L QN+++ IP  I     L    +  N L+ +P EL +L 
Sbjct: 283 NQLKEVPKELGQLARLTRFSLSQNQLIEIPKEIGKIAKLIWLRIDQNQLTEVPRELSQLV 342

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L LH NQL +   E  ++ +L+ L LS N L  +P E+G++  L +L L  N L  
Sbjct: 343 NLTRLHLHQNQLTKIPKELGKVTKLTELSLSQNQLIEVPKELGQLINLVELRLNQNQLTK 402

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +   L       L    R  L  N+  E       L ++        +EL L+   L+ +
Sbjct: 403 VPKEL-----GKLTNLTRLHLSYNKLIEVPKELGKLASL--------RELDLDQNQLTKV 449

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSC--ASLQVKFSDLVTNKESCI 420
           P E+ +  ++  LDLS NS   L PELS+     L+  F+ L    E+ I
Sbjct: 450 PKELGKLAKLVILDLSNNS---LNPELSAAYEQGLETFFAYLQAQDENQI 496



 Score = 42.0 bits (97), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 36/140 (25%)

Query: 266 KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           K+   EA ++    LDL +  L+ +P EIG++T L  L L+GN L               
Sbjct: 11  KQRIAEAKRIAAPTLDLCSLKLTEVPKEIGQLTNLIALSLSGNQL--------------- 55

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
                + +P+             I   T L      LSL G  L+ +P EI +   +T+L
Sbjct: 56  -----TEVPKE------------IGKLTNLIA----LSLSGNQLTEVPKEIGKLANLTQL 94

Query: 386 DLSRNSIQELPPELSSCASL 405
            L +N + E+P E+   ASL
Sbjct: 95  RLHQNRLTEVPEEIGQLASL 114


>gi|421091300|ref|ZP_15552074.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|409999904|gb|EKO50586.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/299 (36%), Positives = 161/299 (53%), Gaps = 15/299 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL    L  +PNE+              + ++LQ L L HN +  L +++  L  L V
Sbjct: 96  TLNLDTNQLTTLPNEI-------------GQLINLQTLDLIHNQLVILPKEINQLQNLRV 142

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S+N+L  LP  IG+L  L++LD+  N +  +P+EIG    L   D S N L  LP  
Sbjct: 143 LGLSNNQLKILPKEIGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKE 202

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +   S+N + +LP+++     +  L +  N+LT L N  I     L EL   
Sbjct: 203 IGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNE-IGQLKNLYELYLG 261

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           KNLL  +P+ +G L  L  LDL  NR+ ++P  I    +L E Y+G N  +ALP E+ +L
Sbjct: 262 KNLLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQL 321

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L  L L++NQLK    E  +L+ L VLDL++N L  LP EI K+  L++L L  N L
Sbjct: 322 QNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEIEKLQNLQRLYLQYNQL 380



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 159/314 (50%), Gaps = 15/314 (4%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           + + LK       L+LS + L+ +PNE+              +  +LQ L L +N +  L
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPNEI-------------GQLQNLQTLYLWNNQLTTL 84

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
             ++  L  L  LN+  N+L+ LP  IG+L  L++LD+  N ++ +P EI     L    
Sbjct: 85  PNEIGQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLG 144

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+NQLK LP  +G+  NL       N + +LP ++     +  LD+  N LT+L    I
Sbjct: 145 LSNNQLKILPKEIGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKE-I 203

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                L EL  S N L  +P+ IG L  L  L L  N++ ++P+ I    +L E Y+G N
Sbjct: 204 GQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKN 263

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L+ LP E+G+L  L TLDL +N+L     E  QL+ L  L L  N  + LP EI ++  
Sbjct: 264 LLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQLQN 323

Query: 300 LRKLLLTGNPLRTL 313
           L+ L L  N L+TL
Sbjct: 324 LQVLFLNNNQLKTL 337



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 186/391 (47%), Gaps = 45/391 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L  ++  L  L  L + +N+L+ LP  IG+L  L++L++  N + 
Sbjct: 46  LDVRVLDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+EIG    L   D   NQL  LP  + +  NL     SNN +  LP+++     +  
Sbjct: 106 TLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQT 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N+L  L N  I     L  L  SKN+L  +P+ IG L  L  L L  N++ ++P 
Sbjct: 166 LDLYANQLKALPNE-IGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   ++ +N L+ LP E+G+L  L  L L  N L     E  QL+ L  LDLS
Sbjct: 225 EIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLPTLDLS 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP EIG++  LR+L L  N    L         P  ++ L++            
Sbjct: 285 NNRLTTLPKEIGQLKNLRELYLGTNQFTAL---------PKEIRQLQN------------ 323

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                      L V    L L    L  +P+EI +   +  LDL+ N ++ LP E+    
Sbjct: 324 -----------LQV----LFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEIEKLQ 368

Query: 404 SLQ---VKFSDLVTNKESCIS----GCYLYW 427
           +LQ   ++++ L + ++  I      C +Y+
Sbjct: 369 NLQRLYLQYNQLSSEEKERIRKLLPKCQIYF 399



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 13/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS+  L  +PNE+       G+    +E      L L  N +  L +++  L  L  
Sbjct: 234 TLHLSDNQLTTLPNEI-------GQLKNLYE------LYLGKNLLTTLPKEVGQLKNLPT 280

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S+N+L+ LP  IG+L  L+ L +  N    +P EI     L     ++NQLK LP+ 
Sbjct: 281 LDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNE 340

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           + +  NL     ++N + +LP+++     + +L ++ N+L+
Sbjct: 341 IEKLQNLQVLDLNDNQLKTLPKEIEKLQNLQRLYLQYNQLS 381


>gi|156551095|ref|XP_001603101.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Nasonia
           vitripennis]
          Length = 591

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 140/431 (32%), Positives = 221/431 (51%), Gaps = 36/431 (8%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYK--------------NFDEAGEGDKWWEAVD 46
           MD +L  AR +G L LS+R+L  VP+ V+               +   +   +KWWE   
Sbjct: 15  MDIVL-TARKTGKLCLSSRALSSVPDRVWTINELTEEELKDLQVDLRNSDNQNKWWEYEP 73

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L+ N++ KL ED++ L  L  L++  N L  LP  IG L  L+ L++S N +  +
Sbjct: 74  LKSLDLSSNSLTKLSEDVKYLGDLVNLDIHDNLLESLPEEIGSLTKLRKLNLSSNKLRTL 133

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P +  S   L   D  SN +KEL  ++G  + L     S+N +TSLP  L    ++  LD
Sbjct: 134 PCKFFSLAELRCLDLKSNLIKELSPAIGDLVMLEYLNLSSNELTSLPAGLGYLVRLIALD 193

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NKL  L  + + S   L +L  S N L  +   +G L ++ RLD H N + S P  +
Sbjct: 194 LNHNKLKELPPD-VMSMRALKKLDVSNNRLEVV-HPLGELRKIERLDFHMNNLSSFP-DV 250

Query: 227 SGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           +GC SL E  + +N+++ +    L  L +L  L+L +N+++    E   L  +  LDLS 
Sbjct: 251 NGCTSLHELCLSHNSITEIDVNCLESLGQLKILNLSNNEIEVIPEEIIMLINVEQLDLSY 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL-PENEDSEAST 343
           N++S +P  +G M  L+   + GN +R +R  +V+  TP ++K+LR  + P N ++  S 
Sbjct: 311 NNISEIPGCVGVMPNLQNFAIDGNKVRNIRRDIVSCGTPRIMKHLRQTINPTNTETSNSP 370

Query: 344 TK-------EDLITMATRLSVTSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQ 393
            +        D  TM       +K LSL G NL+ +P E++E     E+T +DLSRN +Q
Sbjct: 371 LRVCSANSYPDKYTMR-----NAKLLSLVGQNLAEVPDELFENAKEAEVTCVDLSRNKLQ 425

Query: 394 ELPPELSSCAS 404
            L   +S   S
Sbjct: 426 VLTDAMSKVTS 436



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 173/336 (51%), Gaps = 51/336 (15%)

Query: 47  LQKLILAHNNIEKLKED-LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L +L L+HN+I ++  + L +L  L +LN+S+N++  +P  I  L  ++ LD+S+N+I +
Sbjct: 256 LHELCLSHNSITEIDVNCLESLGQLKILNLSNNEIEVIPEEIIMLINVEQLDLSYNNISE 315

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRC------------LNLSDFKASNN----C- 148
           IP  +G    L  F    N+++ +   +  C            +N ++ + SN+    C 
Sbjct: 316 IPGCVGVMPNLQNFAIDGNKVRNIRRDIVSCGTPRIMKHLRQTINPTNTETSNSPLRVCS 375

Query: 149 ----------------------ITSLPEDLADCSKMSKL---DVEGNKLTVLSNNLIASW 183
                                 +  +P++L + +K +++   D+  NKL VL++ + +  
Sbjct: 376 ANSYPDKYTMRNAKLLSLVGQNLAEVPDELFENAKEAEVTCVDLSRNKLQVLTDAM-SKV 434

Query: 184 TMLTELIASKNLLNGMPETIG-SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
           T  T+L  S NLL  +PE +G SL RL  LDL +N + S+P+S+S    L E  +  N  
Sbjct: 435 TSTTDLKLSYNLLAELPEWLGESLERLRYLDLSKNLLTSLPASLSQLRLLVEINISFNKF 494

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMT 298
             +P  + +++ L  L  + N++   C+    L    RL+ LDLSNN++  +PPE+G + 
Sbjct: 495 EEMPECIYEIAGLEILIANDNKMS--CINVPALSNLKRLAHLDLSNNNIGYVPPELGNLK 552

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            LR L L+GN  +  R + +   T  +L YLR+R+P
Sbjct: 553 NLRMLSLSGNCFKQPRQATLMKGTEEILAYLRNRIP 588



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 113/462 (24%), Positives = 198/462 (42%), Gaps = 96/462 (20%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  LR +P              K++   +L+ L L  N I++L   + +L +L  L
Sbjct: 123 LNLSSNKLRTLPC-------------KFFSLAELRCLDLKSNLIKELSPAIGDLVMLEYL 169

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S N+L+ LPA +G L  L +LD++ N + ++P ++ S  AL K D S+N+L E+   L
Sbjct: 170 NLSSNELTSLPAGLGYLVRLIALDLNHNKLKELPPDVMSMRALKKLDVSNNRL-EVVHPL 228

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT------ 187
           G    +       N ++S P D+  C+ + +L +  N +T +  N + S   L       
Sbjct: 229 GELRKIERLDFHMNNLSSFP-DVNGCTSLHELCLSHNSITEIDVNCLESLGQLKILNLSN 287

Query: 188 -----------------ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC- 229
                            +L  S N ++ +P  +G +  L    +  N++ +I   I  C 
Sbjct: 288 NEIEVIPEEIIMLINVEQLDLSYNNISEIPGCVGVMPNLQNFAIDGNKVRNIRRDIVSCG 347

Query: 230 --------------------------CSLAEF---YMGNNA---------LSALPAEL-- 249
                                     CS   +   Y   NA         L+ +P EL  
Sbjct: 348 TPRIMKHLRQTINPTNTETSNSPLRVCSANSYPDKYTMRNAKLLSLVGQNLAEVPDELFE 407

Query: 250 -GKLSKLGTLDLHSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGK-MTTLRKLLLT 306
             K +++  +DL  N+L+       ++  +  L LS N L+ LP  +G+ +  LR L L+
Sbjct: 408 NAKEAEVTCVDLSRNKLQVLTDAMSKVTSTTDLKLSYNLLAELPEWLGESLERLRYLDLS 467

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEASTTKEDLITMATRLSVTSKELSLE 365
            N L +L         PA L  LR  +  N   ++     E +  +A    + + +  + 
Sbjct: 468 KNLLTSL---------PASLSQLRLLVEINISFNKFEEMPECIYEIAGLEILIANDNKMS 518

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +N+ A+ +       +  LDLS N+I  +PPEL +  +L++
Sbjct: 519 CINVPALSN----LKRLAHLDLSNNNIGYVPPELGNLKNLRM 556



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 79/154 (51%), Gaps = 16/154 (10%)

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L +LDL SN L +   +   L  L  LD+ +N L  LP EIG +T LRKL L+ N LRTL
Sbjct: 74  LKSLDLSSNSLTKLSEDVKYLGDLVNLDIHDNLLESLPEEIGSLTKLRKLNLSSNKLRTL 133

Query: 314 RSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                +      L  LR   L  N   E S    DL+ M   L+++S EL+       ++
Sbjct: 134 PCKFFS------LAELRCLDLKSNLIKELSPAIGDLV-MLEYLNLSSNELT-------SL 179

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           P+ +     +  LDL+ N ++ELPP++ S  +L+
Sbjct: 180 PAGLGYLVRLIALDLNHNKLKELPPDVMSMRALK 213


>gi|350425451|ref|XP_003494125.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Bombus
           impatiens]
          Length = 602

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 132/423 (31%), Positives = 217/423 (51%), Gaps = 35/423 (8%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--------------NFDEAGEGDKWWEAVDLQK 49
           I+ +AR SG+LNLS+R L  VPN V+                 D   E ++WWE   LQ 
Sbjct: 30  IIISARKSGNLNLSSRGLFTVPNRVWNINDLTEEEIRDLHFELDYVQETERWWEQEPLQT 89

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L+ N ++K+   + NL  LT L + +N+L +LPA IG L  L  L++S N + K P E
Sbjct: 90  LDLSCNTLKKIDPQIENLTELTTLYLHNNRLEDLPAEIGNLKKLNILNLSNNKLEKFPHE 149

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                 L + +  +N +KEL  ++G  + L+    S N +  LP  +    +++ LD+  
Sbjct: 150 FYKLNELRELNLKNNSIKELDPAVGDFVMLTYLDLSYNNLIELPIGMGYLVRLTSLDLSH 209

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N L  L  +L  +   L +L AS N L  +P  +G L ++  + L  N++ + P  ISGC
Sbjct: 210 NMLKELPPDL-TNMRALQKLNASYNQLEMLP-PLGELRKVETVMLQSNKLTTFP-DISGC 266

Query: 230 CSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             L   ++ +N ++ +    L  + +L TL L +NQ++    E  +L  L + DLS+N L
Sbjct: 267 ILLRVLHLADNNITEIDMSCLEGVGQLKTLTLGNNQIETIPEEIIKLVYLEIFDLSHNKL 326

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-----SRLPENEDSEAS 342
           + +P  IG +  L++  + GN ++ +R+ ++   T  +LK++R     + L   E   A 
Sbjct: 327 TLIPKYIGLLPNLKQFAIDGNDIQNVRTDIIRCGTSRILKHIRQGIKSTNLDVKEHVVAD 386

Query: 343 TTKE---DLITMATRLSVTSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELP 396
           T+     D  TM      ++K LSL G NL+ +P E+ E     ++  +DLSRN +  LP
Sbjct: 387 TSTNIYPDRYTMQ-----STKLLSLAGQNLTELPQEVLENACKADVGTVDLSRNKLSILP 441

Query: 397 PEL 399
            +L
Sbjct: 442 DKL 444



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 181/446 (40%), Gaps = 128/446 (28%)

Query: 14  LNLSNRSLRDVPNEV------------YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           LNL N S++++   V            Y N  E   G  +   V L  L L+HN +++L 
Sbjct: 159 LNLKNNSIKELDPAVGDFVMLTYLDLSYNNLIELPIGMGYL--VRLTSLDLSHNMLKELP 216

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGEL----------------------------HM- 92
            DL N+  L  LN S+N+L  LP  +GEL                            H+ 
Sbjct: 217 PDLTNMRALQKLNASYNQLEMLPP-LGELRKVETVMLQSNKLTTFPDISGCILLRVLHLA 275

Query: 93  -----------------LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
                            LK+L +  N I  IP+EI     L  FD S N+L  +P  +G 
Sbjct: 276 DNNITEIDMSCLEGVGQLKTLTLGNNQIETIPEEIIKLVYLEIFDLSHNKLTLIPKYIGL 335

Query: 136 CLNLSDFKASNNCITSLPEDLADCS------------KMSKLDVEGNKLTVLSNNLIAS- 182
             NL  F    N I ++  D+  C             K + LDV+ + +   S N+    
Sbjct: 336 LPNLKQFAIDGNDIQNVRTDIIRCGTSRILKHIRQGIKSTNLDVKEHVVADTSTNIYPDR 395

Query: 183 WTM------------LTELIA----------------SKNLLNGMPETIGSLSRLIRLDL 214
           +TM            LTEL                  S+N L+ +P+ +  + R+  L L
Sbjct: 396 YTMQSTKLLSLAGQNLTELPQEVLENACKADVGTVDLSRNKLSILPDKLCIIERIADLKL 455

Query: 215 HQNRILSIPSSISGCCSLAEFY-MGNNALSALPAELGKLSKLGTLDLHSNQLKE-----Y 268
             N++  IP  I       +   +  N L +LP  LG L  L  L++  N+ KE     Y
Sbjct: 456 TSNQLTHIPEWIGEKYKYLQILDLSRNLLQSLPINLGLLKYLQELNISFNRYKEIPESVY 515

Query: 269 CVEACQL--------------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            + + ++                    +L++L+L+NN++  +PPE+G +  LR L L+GN
Sbjct: 516 AINSLEILIANDNLITDIDVPSFQKLQKLAILNLANNNIGFVPPELGTLKNLRNLSLSGN 575

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLP 334
             +  R +++   T  +L YLR+R+P
Sbjct: 576 CFKQPRQAILAKSTEEILAYLRNRIP 601



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 79/195 (40%), Gaps = 58/195 (29%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  N +  I   I     L   Y+ NN L  LPAE+G L KL                
Sbjct: 90  LDLSCNTLKKIDPQIENLTELTTLYLHNNRLEDLPAEIGNLKKL---------------- 133

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                 ++L+LSNN L   P E  K+  LR+L L  N ++ L         PA+  ++  
Sbjct: 134 ------NILNLSNNKLEKFPHEFYKLNELRELNLKNNSIKEL--------DPAVGDFV-- 177

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                              M T L ++         NL  +P  +     +T LDLS N 
Sbjct: 178 -------------------MLTYLDLSYN-------NLIELPIGMGYLVRLTSLDLSHNM 211

Query: 392 IQELPPELSSCASLQ 406
           ++ELPP+L++  +LQ
Sbjct: 212 LKELPPDLTNMRALQ 226


>gi|348686390|gb|EGZ26205.1| hypothetical protein PHYSODRAFT_312299 [Phytophthora sojae]
          Length = 759

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 202/429 (47%), Gaps = 37/429 (8%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           R L+ AR +G L+L  R+L + P +VY   +   + +K WE VDL K+ L+HN I  + +
Sbjct: 27  RALREARRTGVLSLPARNLTEFPAKVYHLEEHLEKDEKKWECVDLVKIDLSHNAIPSISD 86

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDC 121
           ++  L  +T + ++ N L  LP    EL  L  LD+S N + + + +  G+   L +   
Sbjct: 87  EIAGLTSVTSIKLTQNALQVLPEGFFELQALTYLDLSHNQLEQDLSESFGALVGLKELVL 146

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S N+L  LP S+    NL      +N +T+LPE +    K+  L    N+LT L  +  A
Sbjct: 147 SGNKLSRLPDSIALLENLETLHVDDNSLTALPESIGRLHKLHVLMAHTNQLTRLPASFGA 206

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
              M   L   KN L    + +  LSRL  LDL QN+++  P    G  +L + ++G N 
Sbjct: 207 LQNM-QNLDLKKNRLESTSDALAGLSRLKFLDLRQNKLIVFPELPEG-ATLDQVFLGYNI 264

Query: 242 LSALPAE--LGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMT 298
           LSA+     L     +  LD+  N+        AC   L  LD++NN LS LPP +G + 
Sbjct: 265 LSAIDETSILRIKDSVTVLDMRDNKFAALPANIACLYLLKTLDVANNDLSDLPPGLGYLK 324

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP--------ENEDSEASTTKEDL-- 348
            L   ++ GNPLR +R S+++    +L KYLR+R P        E E  E    +E L  
Sbjct: 325 HLNHFIVDGNPLRAIRRSVISSGCESLKKYLRTRGPPPVGVDVLEEERDELQLERERLAQ 384

Query: 349 ---------------ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE------ITKLDL 387
                           T   R +  S  +     +L+ +P ++   G+      +  L+L
Sbjct: 385 VDNNKTEELPPPAVEYTAQFREAAASGTMIFTNSSLAVLPPDLVGQGQFNFGSTLIHLNL 444

Query: 388 SRNSIQELP 396
           S N +Q LP
Sbjct: 445 SSNQLQALP 453



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 109/236 (46%), Gaps = 24/236 (10%)

Query: 107 PDEIGSA-----TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           PD +G       + L+  + SSNQL+ LP+S+G  + L      +N + SL   +A    
Sbjct: 425 PDLVGQGQFNFGSTLIHLNLSSNQLQALPASVGELVMLKTLTVEDNQLQSLHPSIAALPH 484

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L +  N+L                L  S +   G    +G+   L  +DL  N + +
Sbjct: 485 LELLRLRKNQL----------------LAESISYFLGDSPALGNT--LKEMDLRSNNLSA 526

Query: 222 IPSSISGCCSLAEFYMGNNALSALPA-ELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 280
           +P+ IS   SL    +  N +  L      +L+K+  + +  N+L+          L+ L
Sbjct: 527 LPAEISQLRSLETLLLAYNRIETLDRFPWSQLAKVSVISVSDNKLRSLGRIYDAPLLASL 586

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
              NN+L+ +P E+G    LR + + GNP RT+R +++   +  +L YL+++LP N
Sbjct: 587 SFENNNLAKVPCELGLCPHLRAIYMNGNPQRTVRGAVIAKGSAEILVYLKNKLPPN 642


>gi|340727641|ref|XP_003402148.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 40-like [Bombus terrestris]
          Length = 604

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/423 (31%), Positives = 218/423 (51%), Gaps = 35/423 (8%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--------------NFDEAGEGDKWWEAVDLQK 49
           I+ +AR SG+LNLS+R L  VPN V+                 D   E ++WWE   LQ 
Sbjct: 30  IIISARKSGNLNLSSRGLFTVPNRVWNINDLTEEEIRDLHFELDYVQETERWWEQEPLQT 89

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L+ N ++K+   + NL  LT LN+ +N+L +LPA IG L  L  L++S N + K P E
Sbjct: 90  LDLSCNTLKKIDPQIENLTELTTLNLHNNQLEDLPAEIGNLKKLNILNLSNNKLEKFPHE 149

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                 L + +  +N +KEL  ++G  + L+    S N +  LP  +    +++ LD+  
Sbjct: 150 FYKLNELHELNLKNNSIKELDPAVGDFVMLTYLDLSYNNLIELPIGMGYLVRLTSLDLGH 209

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N L  L  +L  +   L +L AS N L  +P  +G L ++  + L  N++ + P  ISGC
Sbjct: 210 NMLKELPPDL-TNMRALQKLNASYNQLEMLP-PLGELRKVETVMLQSNKLTTFP-DISGC 266

Query: 230 CSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             L   ++ +N ++ +    L  + +L TL L +NQ++    E  +L  L + DLS+N L
Sbjct: 267 ILLRVLHLADNNITEIDMSCLEGVGQLKTLTLGNNQIETIPEEIIKLVYLEIFDLSHNKL 326

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-----SRLPENEDSEAS 342
           + +P  IG +  L++ ++ GN ++ +R+ ++   T  +LK++R     + L   E   A 
Sbjct: 327 TLIPKYIGLLPNLKQFVIDGNDIQNVRTDIIRCGTSRILKHIRQGIKSTNLDVKEHVVAD 386

Query: 343 TTKE---DLITMATRLSVTSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELP 396
           T+     D  TM      ++K LSL G NL+ +P E+ E     ++  +DLSRN +  L 
Sbjct: 387 TSANIYPDRYTMQ-----STKLLSLAGQNLTELPLEVLENACKADVGTVDLSRNKLSILS 441

Query: 397 PEL 399
            EL
Sbjct: 442 DEL 444



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 155/315 (49%), Gaps = 31/315 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N IE + E++  L  L + ++SHNKL+ +P  IG L  LK   +  N I  +
Sbjct: 293 LKTLTLGNNQIETIPEEIIKLVYLEIFDLSHNKLTLIPKYIGLLPNLKQFVIDGNDIQNV 352

Query: 107 PDEI---GSATAL-----------------VKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
             +I   G++  L                 V  D S+N   +  +     L       + 
Sbjct: 353 RTDIIRCGTSRILKHIRQGIKSTNLDVKEHVVADTSANIYPDRYTMQSTKL----LSLAG 408

Query: 147 NCITSLP-EDLADCSK--MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
             +T LP E L +  K  +  +D+  NKL++LS+ L      + +L  + N L  +PE I
Sbjct: 409 QNLTELPLEVLENACKADVGTVDLSRNKLSILSDEL-CIIERIADLKLTSNQLTHIPEWI 467

Query: 204 GSLSRLIR-LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           G   + ++ LDL +N + S+P ++     L E  +  N    +P  +  ++ L  L  + 
Sbjct: 468 GEKYKYLQILDLSRNLLQSLPINLGLLKYLQELNISFNRYKEIPESVYAINSLEILIAND 527

Query: 263 NQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
           N + +  V + Q   +L++L+L+NN++  +PPE+G +  LR L L+GN  +  R +++  
Sbjct: 528 NLITDIDVPSFQKIKKLAILNLANNNIGFVPPELGTLKNLRNLSLSGNCFKQPRQAILAK 587

Query: 321 PTPALLKYLRSRLPE 335
            T  +L YLR+R+P+
Sbjct: 588 STEEILAYLRNRIPQ 602



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 37/168 (22%)

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L  +  ++  L++L TL+LH+NQL++   E   L+ L++L+LSNN L   P E  K+ 
Sbjct: 95  NTLKKIDPQIENLTELTTLNLHNNQLEDLPAEIGNLKKLNILNLSNNKLEKFPHEFYKLN 154

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L +L L  N ++ L         PA+  ++                     M T L ++
Sbjct: 155 ELHELNLKNNSIKEL--------DPAVGDFV---------------------MLTYLDLS 185

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                    NL  +P  +     +T LDL  N ++ELPP+L++  +LQ
Sbjct: 186 YN-------NLIELPIGMGYLVRLTSLDLGHNMLKELPPDLTNMRALQ 226


>gi|186686076|ref|YP_001869272.1| Miro domain-containing protein [Nostoc punctiforme PCC 73102]
 gi|186468528|gb|ACC84329.1| Miro domain protein [Nostoc punctiforme PCC 73102]
          Length = 1109

 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 129/365 (35%), Positives = 184/365 (50%), Gaps = 15/365 (4%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +  +LQ L L  N +  L  ++  L  L  L++ +N+LS LP  IG+L  L+SL +  N 
Sbjct: 60  QLTNLQTLHLRSNQLSSLPPEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQ 119

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG  T L   D  SNQL  LP   G+  NL      +N ++SLP ++   +K+
Sbjct: 120 LSSLPPEIGQLTNLQSLDLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSSLPPEIGQLTKL 179

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD+  N+L+ L    I   T L  L    N L+ +P   G L++L  LDL  N++ S+
Sbjct: 180 QSLDLSRNQLSSLPPE-IVQLTKLQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSNQLSSL 238

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P  I     L    +G+N LS+LP E+ +L+ L +LDL SNQL     E  QL +L  L 
Sbjct: 239 PPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLY 298

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           LS+N LS LPPEI ++T L+ L L  N L +L   +V      L K     L  N+ S  
Sbjct: 299 LSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQ-----LTKLQSLDLGSNQLSSL 353

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                  I   T L    + L L    LS++P EI +  ++  L LS N +  LPPE+  
Sbjct: 354 PPE----IVQLTNL----QSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQ 405

Query: 402 CASLQ 406
              LQ
Sbjct: 406 LTKLQ 410



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 128/365 (35%), Positives = 183/365 (50%), Gaps = 15/365 (4%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +  +LQ L L  N +  L   +  L  L  L++  N+LS LP  IG+L  L++L +  N 
Sbjct: 37  QLTNLQTLHLDSNQLSSLPPKIGQLTNLQTLHLRSNQLSSLPPEIGQLTNLQTLHLGNNQ 96

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG  T L       NQL  LP  +G+  NL      +N ++SLP +    + +
Sbjct: 97  LSSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQLTNLQSLDLDSNQLSSLPPEFGQLTNL 156

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD+  N+L+ L    I   T L  L  S+N L+ +P  I  L++L  LDL  N++ S+
Sbjct: 157 QSLDLGSNQLSSLPPE-IGQLTKLQSLDLSRNQLSSLPPEIVQLTKLQSLDLRSNQLSSL 215

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P        L    +G+N LS+LP E+ +L+KL +LDL SNQL     E  QL  L  LD
Sbjct: 216 PPEFGQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLD 275

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           LS+N LS LPPEI ++T L+ L L+ N L +L   +V      L K     L  N+ S  
Sbjct: 276 LSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQ-----LTKLQSLDLGSNQLSSL 330

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                  I   T+L    + L L    LS++P EI +   +  LDLS N +  LPPE+  
Sbjct: 331 PPE----IVQLTKL----QSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQ 382

Query: 402 CASLQ 406
              LQ
Sbjct: 383 LTKLQ 387



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 192/388 (49%), Gaps = 29/388 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L N  L  +P E+              +  +LQ L L  N +  L  ++  L  L  
Sbjct: 89  TLHLGNNQLSSLPPEI-------------GQLTNLQSLHLWINQLSSLPPEIGQLTNLQS 135

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+LS LP   G+L  L+SLD+  N +  +P EIG  T L   D S NQL  LP  
Sbjct: 136 LDLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSSLPPE 195

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +   L      +N ++SLP +    +K+  LD+  N+L+ L    I   T L  L   
Sbjct: 196 IVQLTKLQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSNQLSSLPPE-IVQLTKLQSLDLG 254

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L+ +P  I  L+ L  LDL  N++ S+P  I     L   Y+ +N LS+LP E+ +L
Sbjct: 255 SNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQL 314

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           +KL +LDL SNQL     E  QL +L  LDL +N LS LPPEI ++T L+ L L+ N L 
Sbjct: 315 TKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLS 374

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           +L   +V      L K     L  N+ S         I   T+L    + L L    LS+
Sbjct: 375 SLPPEIVQ-----LTKLQSLYLSSNQLSSLPPE----IVQLTKL----QSLDLGSNQLSS 421

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPEL 399
           +P EI +   + KLDL RN +  +PPE+
Sbjct: 422 LPREIRQLSNLKKLDLRRNPV-PIPPEI 448



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 186/362 (51%), Gaps = 15/362 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           ++ +L L++  +  L  ++  L  L  L++  N+LS LP  IG+L  L++L +  N +  
Sbjct: 17  EVTELDLSYKGLTILPPEIGQLTNLQTLHLDSNQLSSLPPKIGQLTNLQTLHLRSNQLSS 76

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG  T L      +NQL  LP  +G+  NL       N ++SLP ++   + +  L
Sbjct: 77  LPPEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQLTNLQSL 136

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N+L+ L        T L  L    N L+ +P  IG L++L  LDL +N++ S+P  
Sbjct: 137 DLDSNQLSSLPPEF-GQLTNLQSLDLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSSLPPE 195

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I     L    + +N LS+LP E G+L+KL +LDL SNQL     E  QL +L  LDL +
Sbjct: 196 IVQLTKLQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGS 255

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N LS LPPEI ++T L+ L L+ N L +L   +V      L K     L  N+ S     
Sbjct: 256 NQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQ-----LTKLQSLYLSSNQLSSLPPE 310

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I   T+L    + L L    LS++P EI +  ++  LDL  N +  LPPE+    +
Sbjct: 311 ----IVQLTKL----QSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTN 362

Query: 405 LQ 406
           LQ
Sbjct: 363 LQ 364



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 1/204 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N +  L  ++  L  L  L++S N+LS LP  I +L  L+SL +S N +  +
Sbjct: 248 LQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSL 307

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EI   T L   D  SNQL  LP  + +   L      +N ++SLP ++   + +  LD
Sbjct: 308 PPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLD 367

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L+ L    I   T L  L  S N L+ +P  I  L++L  LDL  N++ S+P  I
Sbjct: 368 LSSNQLSSLPPE-IVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPREI 426

Query: 227 SGCCSLAEFYMGNNALSALPAELG 250
               +L +  +  N +   P  LG
Sbjct: 427 RQLSNLKKLDLRRNPVPIPPEILG 450



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 38/216 (17%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+LS+  L  +P E+              +   LQ L L+ N +  L  ++  L  L  
Sbjct: 273 SLDLSSNQLSSLPPEIV-------------QLTKLQSLYLSSNQLSSLPPEIVQLTKLQS 319

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+LS LP  I +L  L+SLD+  N +  +P EI   T L   D SSNQL  LP  
Sbjct: 320 LDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPE 379

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +   L     S+N ++SLP ++   +K+  LD+  N+L+                   
Sbjct: 380 IVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLS------------------- 420

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
                 +P  I  LS L +LDL +N +  IP  I G
Sbjct: 421 -----SLPREIRQLSNLKKLDLRRNPV-PIPPEILG 450



 Score = 44.7 bits (104), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 14/148 (9%)

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---SSLVNGPTPALLK 327
           +A +  ++ LDLS   L+ LPPEIG++T L+ L L  N L +L      L N  T  L  
Sbjct: 12  QAVKDEVTELDLSYKGLTILPPEIGQLTNLQTLHLDSNQLSSLPPKIGQLTNLQTLHLRS 71

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL----SLEGMN-----LSAIPSEIWE 378
              S LP   +    T  + L     +LS    E+    +L+ ++     LS++P EI +
Sbjct: 72  NQLSSLP--PEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQ 129

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQ 406
              +  LDL  N +  LPPE     +LQ
Sbjct: 130 LTNLQSLDLDSNQLSSLPPEFGQLTNLQ 157


>gi|421099978|ref|ZP_15560620.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796959|gb|EKR99076.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 580

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 200/406 (49%), Gaps = 25/406 (6%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV-------DLQKLILAHNNIEKLKED 63
            LNL N  L  +P E+   K   E          +        LQKL L +N ++ L ++
Sbjct: 64  KLNLYNNQLTTIPKEIGYLKELQELNLSRNQLTTLTLPNKIGQLQKLYLDNNQLKTLPKE 123

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +++N+L  LP  IG L  L+ LD+  N +  +P+EIG    L K D S 
Sbjct: 124 IGKLQNLQELYLTNNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSG 183

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQLK LP  +G+  NL +   ++N + +LP+++    ++  LD+  N+LT L N  I   
Sbjct: 184 NQLKTLPKEIGKLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNE-IGKL 242

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L +L  S N L  +P+ IG L  L  L L+ N++ ++P  I     L   ++ +N L+
Sbjct: 243 QNLQKLDLSGNQLKTLPKEIGKLQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDNKLT 302

Query: 244 ALPAELGKLSKL-GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
            LP E+G+L KL   L L  NQLK    +   L+ L +LDLS N L  LP +IG++  L+
Sbjct: 303 TLPKEIGQLQKLQALLHLGDNQLKTLPKDIGYLKELQLLDLSGNQLKTLPKDIGQLQKLQ 362

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N L+TL   +       +L           +++  T  +D I    +L V    
Sbjct: 363 DLELDSNQLKTLPKDIGKLQNLQVLNL--------SNNQLKTLPKD-IGQLQKLRV---- 409

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           L L    L  +P EI +  ++ +L+LS N +  LP ++    +LQV
Sbjct: 410 LELYNNQLKTLPKEIGQLQKLQELNLSHNKLTTLPKDIEKLQNLQV 455



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 126/410 (30%), Positives = 201/410 (49%), Gaps = 24/410 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+L +  L  +PNE+ K               +LQKL L+ N ++ L +++  L  L  
Sbjct: 155 DLDLRDNQLTTLPNEIGK-------------LQNLQKLDLSGNQLKTLPKEIGKLQNLRE 201

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+L  LP  IG L  L+ LD+  N +  +P+EIG    L K D S NQLK LP  
Sbjct: 202 LDLNDNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKE 261

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +     N + +LP+++    ++  L +  NKLT L   +     +   L   
Sbjct: 262 IGKLQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDNKLTTLPKEIGQLQKLQALLHLG 321

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  LDL  N++ ++P  I     L +  + +N L  LP ++GKL
Sbjct: 322 DNQLKTLPKDIGYLKELQLLDLSGNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKDIGKL 381

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L +NQLK    +  QL +L VL+L NN L  LP EIG++  L++L L+ N L 
Sbjct: 382 QNLQVLNLSNNQLKTLPKDIGQLQKLRVLELYNNQLKTLPKEIGQLQKLQELNLSHNKLT 441

Query: 312 TLRSSL-------VNGPTPALLKYLRSRLPENEDSEA-STTKEDLITMATRLSVTS--KE 361
           TL   +       V   T   LK L   + + ++ +  + +   L T+   +      +E
Sbjct: 442 TLPKDIEKLQNLQVLNLTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQE 501

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           L L    L+ +P +I +   + +L L+ N +  LP E+     L+V   D
Sbjct: 502 LYLTNNQLTTLPKDIEKLQNLQELYLTNNQLTTLPKEIRYLKGLEVLHLD 551



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 196/384 (51%), Gaps = 24/384 (6%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           + ++N  EA          D++ L L +N +  L +D+  L  L  LN+ +N+L+ +P  
Sbjct: 24  KTHRNLTEA-----LQNPTDVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKE 78

Query: 87  IGELHMLKSLDVSFNSI--MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKA 144
           IG L  L+ L++S N +  + +P++IG    L K    +NQLK LP  +G+  NL +   
Sbjct: 79  IGYLKELQELNLSRNQLTTLTLPNKIGQ---LQKLYLDNNQLKTLPKEIGKLQNLQELYL 135

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           +NN + +LP+++    ++  LD+  N+LT L N  I     L +L  S N L  +P+ IG
Sbjct: 136 TNNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNE-IGKLQNLQKLDLSGNQLKTLPKEIG 194

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            L  L  LDL+ N++ ++P  I     L +  + +N L+ LP E+GKL  L  LDL  NQ
Sbjct: 195 KLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQ 254

Query: 265 LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           LK    E  +L+ L  L L  N L  LP EIG +  L+ L L+ N L TL   +      
Sbjct: 255 LKTLPKEIGKLQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDNKLTTLPKEI------ 308

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
             L+ L++ L    D++  T  +D I     L +    L L G  L  +P +I +  ++ 
Sbjct: 309 GQLQKLQALLHLG-DNQLKTLPKD-IGYLKELQL----LDLSGNQLKTLPKDIGQLQKLQ 362

Query: 384 KLDLSRNSIQELPPELSSCASLQV 407
            L+L  N ++ LP ++    +LQV
Sbjct: 363 DLELDSNQLKTLPKDIGKLQNLQV 386



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 161/339 (47%), Gaps = 38/339 (11%)

Query: 13  SLNLSNRSLRDVPNEVYK-----NFDEAGEGDKWW-----EAVDLQKLILAHNNIEKLKE 62
            L+L +  L  +PNE+ K       D +G   K       +  +LQ+L L  N ++ L +
Sbjct: 224 DLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLQELYLYGNQLKTLPK 283

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL------------------------DV 98
           ++  L  L VL++S NKL+ LP  IG+L  L++L                        D+
Sbjct: 284 EIGYLKELQVLHLSDNKLTTLPKEIGQLQKLQALLHLGDNQLKTLPKDIGYLKELQLLDL 343

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N +  +P +IG    L   +  SNQLK LP  +G+  NL     SNN + +LP+D+  
Sbjct: 344 SGNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKDIGKLQNLQVLNLSNNQLKTLPKDIGQ 403

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             K+  L++  N+L  L    I     L EL  S N L  +P+ I  L  L  L+L  N+
Sbjct: 404 LQKLRVLELYNNQLKTLPKE-IGQLQKLQELNLSHNKLTTLPKDIEKLQNLQVLNLTNNQ 462

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           + ++P  I    +L    + +N L+ LP ++GKL  L  L L +NQL     +  +L+ L
Sbjct: 463 LKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDIEKLQNL 522

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
             L L+NN L+ LP EI  +  L  L L   P   LRS 
Sbjct: 523 QELYLTNNQLTTLPKEIRYLKGLEVLHLDDIP--ALRSQ 559


>gi|270015218|gb|EFA11666.1| hypothetical protein TcasGA2_TC008530 [Tribolium castaneum]
          Length = 621

 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 226/490 (46%), Gaps = 99/490 (20%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEV-------------YKNFDEAGEGDKWWEAV----- 45
           ++K  R +G LNLS RSL  VP ++             Y +F++  E + WW+       
Sbjct: 34  MIKIVRRTGQLNLSGRSLAHVPEKMFTMYELTEEDTAKYIDFNKEPEEENWWQFKPLNYL 93

Query: 46  ------------------DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
                             DL  L L  NNI  L  ++ NL  LT LN+SHNK++ LP   
Sbjct: 94  DLSSNVLQEIPGKIGMFEDLTALNLQDNNITSLPPEICNLTKLTKLNLSHNKINLLPMEF 153

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L ++ N++ KI         L + D S N L +LP  +G  + L++   S+N
Sbjct: 154 YKLVELQVLSLAHNNLEKISKNFADLVMLQQLDLSHNILTKLPPGMGFLVRLTEINLSHN 213

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +  LP D+ +   + KLDV  N L  L                           +G L+
Sbjct: 214 KLIELPPDIVNLRGLLKLDVTHNDLVYLP-------------------------KMGELA 248

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLK 266
           +L  L    N I  IP    GC  L + Y GNN +  +  +  + +S L  LDL  N+++
Sbjct: 249 KLQFLYAQHNNIEEIP-DFEGCTHLQQVYFGNNYIKEVTTDFCENMSNLKILDLRDNKIE 307

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           +   E   L+ L  LDL+NN L+ LP  +G +  L+ L L GN L+ +R  ++ G T  +
Sbjct: 308 QIPNEIAMLQHLIRLDLTNNDLTDLPNSLGLLAHLQNLQLEGNKLKKIRGDIIKGGTMRI 367

Query: 326 LKYLRSRLPENEDSEA----STTKEDLITMATRLSVT-SKELSLEGMNLSAIPSEIWE-- 378
           LK+L+ +L ++ED E+    ST + +  T   + ++  S+ L++    L+++P +++E  
Sbjct: 368 LKHLKEQL-DDEDLESVPKVSTMQHEAKTFPDKYTIKHSRSLNVTMKQLTSVPDDVFEEA 426

Query: 379 -------------------------AGEITKLDLSRNSIQELPPELSSCASLQVKFSDLV 413
                                    A  +T+L+LS N+I E+P  +S+C  +++K+ DL 
Sbjct: 427 KLAEVTIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISEIPEFISNC--IKLKYFDLG 484

Query: 414 TNKESCISGC 423
            N  S +  C
Sbjct: 485 NNLLSDLPEC 494



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 140/319 (43%), Gaps = 46/319 (14%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAA 86
           +Y   +   E   +     LQ++   +N I+++  D   N+  L +L++  NK+ ++P  
Sbjct: 253 LYAQHNNIEEIPDFEGCTHLQQVYFGNNYIKEVTTDFCENMSNLKILDLRDNKIEQIPNE 312

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK--- 143
           I  L  L  LD++ N +  +P+ +G    L       N+LK++   + +   +   K   
Sbjct: 313 IAMLQHLIRLDLTNNDLTDLPNSLGLLAHLQNLQLEGNKLKKIRGDIIKGGTMRILKHLK 372

Query: 144 -------------------------------------ASNNCITSLPEDLADCSKMSKL- 165
                                                 +   +TS+P+D+ + +K++++ 
Sbjct: 373 EQLDDEDLESVPKVSTMQHEAKTFPDKYTIKHSRSLNVTMKQLTSVPDDVFEEAKLAEVT 432

Query: 166 --DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
             D+  NKL  + N +      LTEL  S N ++ +PE I +  +L   DL  N +  +P
Sbjct: 433 IVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISEIPEFISNCIKLKYFDLGNNLLSDLP 492

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLD 281
             +S    L E  + NN    +P  +  +  L  L    N++ +  VE  +   R++ LD
Sbjct: 493 ECLSSLVGLRELVLSNNRFVHIPDCVYSMVGLEILLASDNKITDINVEGLKNLTRIATLD 552

Query: 282 LSNNSLSGLPPEIGKMTTL 300
           L+NN++S +PPE+G +T L
Sbjct: 553 LTNNNMSHIPPELGNVTQL 571



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 119/495 (24%), Positives = 206/495 (41%), Gaps = 131/495 (26%)

Query: 14  LNLSNRSLRDVPNEVYK------------NFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           LNLS+  +  +P E YK            N ++  +   + + V LQ+L L+HN + KL 
Sbjct: 139 LNLSHNKINLLPMEFYKLVELQVLSLAHNNLEKISKN--FADLVMLQQLDLSHNILTKLP 196

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAI----------------------GELHMLKSLDVS 99
             +  L  LT +N+SHNKL ELP  I                      GEL  L+ L   
Sbjct: 197 PGMGFLVRLTEINLSHNKLIELPPDIVNLRGLLKLDVTHNDLVYLPKMGELAKLQFLYAQ 256

Query: 100 FNSIMKIPDEIG-----------------------SATALVKFDCSSNQLKELPSSLGRC 136
            N+I +IPD  G                       + + L   D   N+++++P+ +   
Sbjct: 257 HNNIEEIPDFEGCTHLQQVYFGNNYIKEVTTDFCENMSNLKILDLRDNKIEQIPNEIAML 316

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-----LTELIA 191
            +L     +NN +T LP  L   + +  L +EGNKL  +  ++I   TM     L E + 
Sbjct: 317 QHLIRLDLTNNDLTDLPNSLGLLAHLQNLQLEGNKLKKIRGDIIKGGTMRILKHLKEQLD 376

Query: 192 SKNLLNGMPETIGSLSRLIR----------------LDLHQNRILSIPSSISGCCSLAEF 235
            ++L     E++  +S +                  L++   ++ S+P  +     LAE 
Sbjct: 377 DEDL-----ESVPKVSTMQHEAKTFPDKYTIKHSRSLNVTMKQLTSVPDDVFEEAKLAEV 431

Query: 236 YMGN---NALSALPAELGKLSK-LGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG 289
            + +   N L ++P  +  +++ L  L+L  N + E    +  C ++L   DL NN LS 
Sbjct: 432 TIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISEIPEFISNC-IKLKYFDLGNNLLSD 490

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP  +  +  LR+L+L+ N                       R     D   S    + I
Sbjct: 491 LPECLSSLVGLRELVLSNN-----------------------RFVHIPDCVYSMVGLE-I 526

Query: 350 TMATRLSVTSKELSLEGM-NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
            +A+   +T  ++++EG+ NL+ I +          LDL+ N++  +PPEL +    Q+ 
Sbjct: 527 LLASDNKIT--DINVEGLKNLTRIAT----------LDLTNNNMSHIPPELGNVT--QLS 572

Query: 409 FSDLVTNKESCISGC 423
           +  +++     IS C
Sbjct: 573 WKSIISADSDLISDC 587



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 94/202 (46%), Gaps = 34/202 (16%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           + S SLN++ + L  VP++V   F+EA                       KL E      
Sbjct: 403 KHSRSLNVTMKQLTSVPDDV---FEEA-----------------------KLAE------ 430

Query: 69  LLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK 127
            +T++++  NKL  +P  I  +   L  L++S N+I +IP+ I +   L  FD  +N L 
Sbjct: 431 -VTIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISEIPEFISNCIKLKYFDLGNNLLS 489

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +LP  L   + L +   SNN    +P+ +     +  L    NK+T ++   + + T + 
Sbjct: 490 DLPECLSSLVGLRELVLSNNRFVHIPDCVYSMVGLEILLASDNKITDINVEGLKNLTRIA 549

Query: 188 ELIASKNLLNGMPETIGSLSRL 209
            L  + N ++ +P  +G++++L
Sbjct: 550 TLDLTNNNMSHIPPELGNVTQL 571


>gi|325190106|emb|CCA24588.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 780

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/339 (33%), Positives = 176/339 (51%), Gaps = 8/339 (2%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           + R L+ AR SG L L  R L  +P +VY   D   + +K WE +DL K+ ++HN I  +
Sbjct: 33  LSRSLREARHSGFLRLPARQLESLPKQVYSLADFLEKDEKPWECIDLFKIDVSHNKITAI 92

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKF 119
           K+++ N+  L+   +S N L  LP    +L  L  LD+S N      P E+G    L   
Sbjct: 93  KDEIGNIITLSHFKMSQNALLGLPKGFFKLTQLVDLDLSHNQFSNCFPAEVGKLRNLRDL 152

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           + S N L  LP S+G    L      NN +++LPE +  C+++  L V+ N+L+ L  +L
Sbjct: 153 NLSHNNLTALPESIGNLSFLESLSIDNNRLSALPEAVGKCTRLHALSVQSNQLSCLPKSL 212

Query: 180 IASWTMLTELIASKNLLNGMP-ETIGSLSRLIRLDLHQNRILS---IPSSISGCCSLAEF 235
               + LT L   KN L  +  +   +  RLI LDL QNR++    +PS+ +    L   
Sbjct: 213 -RDLSALTSLHLCKNQLVSIERDAFLAFHRLIVLDLRQNRLVEMPYLPSTKNSNQVLDRV 271

Query: 236 YMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
           ++G N L+ +P +       +  LDL  NQL+        L +L  LDLSNN+L+ LP  
Sbjct: 272 FLGYNRLTEIPESTFVTRDSITLLDLRDNQLEALPTAIATLYKLKSLDLSNNALTDLPHS 331

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           +G +  L +L L GNP+R +R +++      L K+LR+R
Sbjct: 332 LGYIKQLTRLHLDGNPMRAIRRAVIVAGCQTLKKHLRTR 370



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 129/293 (44%), Gaps = 36/293 (12%)

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L K D S N++  +   +G  + LS FK S N +  LP+     +++  LD+  N+ +  
Sbjct: 79  LFKIDVSHNKITAIKDEIGNIITLSHFKMSQNALLGLPKGFFKLTQLVDLDLSHNQFSNC 138

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
               +     L +L  S N L  +PE+IG+LS L  L +  NR+ ++P ++  C  L   
Sbjct: 139 FPAEVGKLRNLRDLNLSHNNLTALPESIGNLSFLESLSIDNNRLSALPEAVGKCTRLHAL 198

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA--CQLRLSVLDLSNNSLSGLPPE 293
            + +N LS LP  L  LS L +L L  NQL     +A     RL VLDL  N L  +P  
Sbjct: 199 SVQSNQLSCLPKSLRDLSALTSLHLCKNQLVSIERDAFLAFHRLIVLDLRQNRLVEMP-- 256

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEASTTKEDLITMA 352
                    L  T N  + L            L Y R + +PE+             T  
Sbjct: 257 --------YLPSTKNSNQVLDR--------VFLGYNRLTEIPES-------------TFV 287

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           TR S+T   L L    L A+P+ I    ++  LDLS N++ +LP  L     L
Sbjct: 288 TRDSITL--LDLRDNQLEALPTAIATLYKLKSLDLSNNALTDLPHSLGYIKQL 338



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 101/231 (43%), Gaps = 46/231 (19%)

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
           CS +  L++  N+LT L +++      L  LI  +N+L  +   + SL RL  L L +N+
Sbjct: 449 CSTLQTLNLSNNQLTTL-DSIFGELKALVTLIVEENVLQEIHPFVVSLPRLKNLLLRKNQ 507

Query: 219 ILSIP--------SSISGCCSLAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKEYC 269
           + S           + S    L E  + NN L   P   G     L TL L  N L+   
Sbjct: 508 LTSTALQKLLRNKENGSIVSPLEEIDVSNNMLDRFPYGFGAFGISLETLILSYNHLQ--T 565

Query: 270 VEACQL--------RLSVLDLS----------------------NNSLSGLPPEIGKMTT 299
           +  C L        RL VL L+                      NN+++ +P E+G    
Sbjct: 566 LADCPLEFSWAMLPRLGVLSLTDNKLNDLGKVFELPGLASFSFENNNVTHVPCELGLCPH 625

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           L  L L GNP +T+RS ++   + A+L++LR++LP+    E S  K  L T
Sbjct: 626 LHALYLNGNPQKTIRSGIIAKGSHAVLEHLRNKLPQ----EPSRGKRSLAT 672


>gi|189241927|ref|XP_968016.2| PREDICTED: similar to mitotic protein phosphatase 1 regulator,
           putative [Tribolium castaneum]
          Length = 594

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 136/478 (28%), Positives = 223/478 (46%), Gaps = 87/478 (18%)

Query: 4   ILKAARTSGSLNLSNRSL-RDVPNEVYKNFDEAGEGDKWWEAV----------------- 45
           ++K  R +G LNLS RSL  +     Y +F++  E + WW+                   
Sbjct: 34  MIKIVRRTGQLNLSGRSLAHEEDTAKYIDFNKEPEEENWWQFKPLNYLDLSSNVLQEIPG 93

Query: 46  ------DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
                 DL  L L  NNI  L  ++ NL  LT LN+SHNK++ LP    +L  L+ L ++
Sbjct: 94  KIGMFEDLTALNLQDNNITSLPPEICNLTKLTKLNLSHNKINLLPMEFYKLVELQVLSLA 153

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N++ KI         L + D S N L +LP  +G  + L++   S+N +  LP D+ + 
Sbjct: 154 HNNLEKISKNFADLVMLQQLDLSHNILTKLPPGMGFLVRLTEINLSHNKLIELPPDIVNL 213

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
             + KLDV  N L  L                           +G L++L  L    N I
Sbjct: 214 RGLLKLDVTHNDLVYLP-------------------------KMGELAKLQFLYAQHNNI 248

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQLR-L 277
             IP    GC  L + Y GNN +  +  +  + +S L  LDL  N++++   E   L+ L
Sbjct: 249 EEIP-DFEGCTHLQQVYFGNNYIKVITTDFCENMSNLKILDLRDNKIEQIPNEIAMLQHL 307

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             LDL+NN L+ LP  +G +  L+ L L GN L+ +R  ++ G T  +LK+L+ +L ++E
Sbjct: 308 IRLDLTNNDLTDLPNSLGLLAHLQNLQLEGNKLKKIRGDIIKGGTMRILKHLKEQL-DDE 366

Query: 338 DSEA----STTKEDLITMATRLSVT-SKELSLEGMNLSAIPSEIWE-------------- 378
           D E+    ST + +  T   + ++  S+ L++    L+++P +++E              
Sbjct: 367 DLESVPKVSTMQHEAKTFPDKYTIKHSRSLNVTMKQLTSVPDDVFEEAKLAEVTIVDLCK 426

Query: 379 -------------AGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISGC 423
                        A  +T+L+LS N+I E+P  +S+C  +++K+ DL  N  S +  C
Sbjct: 427 NKLPSVPNGIQLVAENLTELNLSMNAISEIPEFISNC--IKLKYFDLGNNLLSDLPEC 482



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 162/317 (51%), Gaps = 32/317 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N IE++  ++  L  L  L++++N L++LP ++G L  L++L +  N + K
Sbjct: 283 NLKILDLRDNKIEQIPNEIAMLQHLIRLDLTNNDLTDLPNSLGLLAHLQNLQLEGNKLKK 342

Query: 106 IPDEI--GSATALVKF--------DCSS--------NQLKELPSSL----GRCLNLSDFK 143
           I  +I  G    ++K         D  S        ++ K  P        R LN++  +
Sbjct: 343 IRGDIIKGGTMRILKHLKEQLDDEDLESVPKVSTMQHEAKTFPDKYTIKHSRSLNVTMKQ 402

Query: 144 ASNNCITSLPEDLADCSKMSKL---DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
                +TS+P+D+ + +K++++   D+  NKL  + N +      LTEL  S N ++ +P
Sbjct: 403 -----LTSVPDDVFEEAKLAEVTIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISEIP 457

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           E I +  +L   DL  N +  +P  +S    L E  + NN    +P  +  +  L  L  
Sbjct: 458 EFISNCIKLKYFDLGNNLLSDLPECLSSLVGLRELVLSNNRFVHIPDCVYSMVGLEILLA 517

Query: 261 HSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
             N++ +  VE  +   R++ LDL+NN++S +PPE+G +T LR L L GN  R  R +++
Sbjct: 518 SDNKITDINVEGLKNLTRIATLDLTNNNMSHIPPELGNVTQLRTLELRGNCFRQPRYAIL 577

Query: 319 NGPTPALLKYLRSRLPE 335
              T ++L YLR R+P+
Sbjct: 578 EQGTASVLSYLRDRIPK 594



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 199/478 (41%), Gaps = 129/478 (26%)

Query: 14  LNLSNRSLRDVPNEVYK------------NFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           LNLS+  +  +P E YK            N ++  +   + + V LQ+L L+HN + KL 
Sbjct: 127 LNLSHNKINLLPMEFYKLVELQVLSLAHNNLEKISKN--FADLVMLQQLDLSHNILTKLP 184

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAI----------------------GELHMLKSLDVS 99
             +  L  LT +N+SHNKL ELP  I                      GEL  L+ L   
Sbjct: 185 PGMGFLVRLTEINLSHNKLIELPPDIVNLRGLLKLDVTHNDLVYLPKMGELAKLQFLYAQ 244

Query: 100 FNSIMKIPDEIG-----------------------SATALVKFDCSSNQLKELPSSLGRC 136
            N+I +IPD  G                       + + L   D   N+++++P+ +   
Sbjct: 245 HNNIEEIPDFEGCTHLQQVYFGNNYIKVITTDFCENMSNLKILDLRDNKIEQIPNEIAML 304

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM-----LTELIA 191
            +L     +NN +T LP  L   + +  L +EGNKL  +  ++I   TM     L E + 
Sbjct: 305 QHLIRLDLTNNDLTDLPNSLGLLAHLQNLQLEGNKLKKIRGDIIKGGTMRILKHLKEQLD 364

Query: 192 SKNLLNGMPETIGSLSRLIR----------------LDLHQNRILSIPSSISGCCSLAEF 235
            ++L     E++  +S +                  L++   ++ S+P  +     LAE 
Sbjct: 365 DEDL-----ESVPKVSTMQHEAKTFPDKYTIKHSRSLNVTMKQLTSVPDDVFEEAKLAEV 419

Query: 236 YMGN---NALSALPAELGKLSK-LGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSG 289
            + +   N L ++P  +  +++ L  L+L  N + E    +  C ++L   DL NN LS 
Sbjct: 420 TIVDLCKNKLPSVPNGIQLVAENLTELNLSMNAISEIPEFISNC-IKLKYFDLGNNLLSD 478

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP  +  +  LR+L+L+ N                       R     D   S    + I
Sbjct: 479 LPECLSSLVGLRELVLSNN-----------------------RFVHIPDCVYSMVGLE-I 514

Query: 350 TMATRLSVTSKELSLEGM-NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +A+   +T  ++++EG+ NL+ I +          LDL+ N++  +PPEL +   L+
Sbjct: 515 LLASDNKIT--DINVEGLKNLTRIAT----------LDLTNNNMSHIPPELGNVTQLR 560



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 15/177 (8%)

Query: 9   RTSGSLNLSNRSLRDVPNEVY--------------KNFDEAGEGDKWWEAVDLQKLILAH 54
           + S SLN++ + L  VP++V+              KN   +        A +L +L L+ 
Sbjct: 391 KHSRSLNVTMKQLTSVPDDVFEEAKLAEVTIVDLCKNKLPSVPNGIQLVAENLTELNLSM 450

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I ++ E + N   L   ++ +N LS+LP  +  L  L+ L +S N  + IPD + S  
Sbjct: 451 NAISEIPEFISNCIKLKYFDLGNNLLSDLPECLSSLVGLRELVLSNNRFVHIPDCVYSMV 510

Query: 115 ALVKFDCSSNQLKEL-PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
            L     S N++ ++    L     ++    +NN ++ +P +L + +++  L++ GN
Sbjct: 511 GLEILLASDNKITDINVEGLKNLTRIATLDLTNNNMSHIPPELGNVTQLRTLELRGN 567


>gi|418744888|ref|ZP_13301233.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794219|gb|EKR92129.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 481

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 188/389 (48%), Gaps = 28/389 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+LS+  L  +P E+ K               +LQKL L+HN +  L +++  L  L  
Sbjct: 39  DLDLSSNQLMTLPKEIGK-------------LQNLQKLDLSHNQLTTLPKEIGQLQNLQK 85

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN++ N+L+ L   IG L  L++LD+  N +  +P+EI +   L   D   NQL  LP  
Sbjct: 86  LNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEE 145

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +    NL       N +T+LPE++ +   +  LD+EGN+L  L    I +   L  L   
Sbjct: 146 IWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEE-IGNLQNLQTLDLE 204

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L +L L+ NR+ ++P  +    +L E Y+ NN L+ LP E+  L
Sbjct: 205 GNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIEDL 264

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L L SNQL     E  +L+ L  L L NN L+ LP EIG +  L+ L L  N   
Sbjct: 265 QNLKILSLGSNQLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIGNLQNLQDLNLNSNQFT 324

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL   + N     L K  +  L  N   + +T  E++  +        K L LEG  L+ 
Sbjct: 325 TLPKEIWN-----LQKLQKLSLGRN---QLTTLPEEIWNLQNL-----KTLDLEGNQLAT 371

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +P EI     + KLDL  N +  LP E+ 
Sbjct: 372 LPEEIGNLQNLQKLDLEGNQLTTLPKEIG 400



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 186/362 (51%), Gaps = 15/362 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N +  L +++  L  L  L++SHN+L+ LP  IG+L  L+ L+++ N +  
Sbjct: 36  NLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTT 95

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +  EIG+   L   D   NQL  LP  +    NL       N +T+LPE++ +   +  L
Sbjct: 96  LSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTL 155

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L    I +   L  L    N L  +PE IG+L  L  LDL  N++ ++P  
Sbjct: 156 DLGRNQLTTLPEE-IGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKE 214

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L + Y+ NN L+ LP E+GKL  L  L L++N+L     E   L+ L +L L +
Sbjct: 215 IGKLQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIEDLQNLKILSLGS 274

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP E+GK+  L++L L  N L TL   + N      L+ L+     N +S   TT
Sbjct: 275 NQLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIGN------LQNLQDL---NLNSNQFTT 325

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I    +L    ++LSL    L+ +P EIW    +  LDL  N +  LP E+ +  +
Sbjct: 326 LPKEIWNLQKL----QKLSLGRNQLTTLPEEIWNLQNLKTLDLEGNQLATLPEEIGNLQN 381

Query: 405 LQ 406
           LQ
Sbjct: 382 LQ 383



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 178/347 (51%), Gaps = 20/347 (5%)

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
           S++ L  LP  IG+L  L+ LD+S N +M +P EIG    L K D S NQL  LP  +G+
Sbjct: 20  SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQ 79

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTELIASK 193
             NL     ++N +T+L +++ +   +  LD+  N+LT L   +   W +  L  L   +
Sbjct: 80  LQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEI---WNLQNLQTLDLGR 136

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +PE I +L  L  LDL +N++ ++P  I    +L    +  N L+ LP E+G L 
Sbjct: 137 NQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQ 196

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L TLDL  NQL     E  +L+ L  L L NN L+ LP E+GK+  L++L L  N L T
Sbjct: 197 NLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLTT 256

Query: 313 LRSS---LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL----SLE 365
           L      L N    +L     + LP+ E  +    +E L     RL+   KE+    +L+
Sbjct: 257 LPKEIEDLQNLKILSLGSNQLTTLPK-EVGKLQNLQE-LYLYNNRLTTLPKEIGNLQNLQ 314

Query: 366 GMNL-----SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +NL     + +P EIW   ++ KL L RN +  LP E+ +  +L+ 
Sbjct: 315 DLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKT 361



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 159/354 (44%), Gaps = 58/354 (16%)

Query: 13  SLNLSNRSLRDVPNEVY--KNFDEAGEG--------DKWWEAVDLQKLILAHNNIEKLKE 62
           +L+L    L  +P E++  +N      G        ++ W   +LQ L L  N +  L E
Sbjct: 108 TLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPE 167

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++ NL  L  L++  N+L+ LP  IG L  L++LD+  N +  +P EIG    L K    
Sbjct: 168 EIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLY 227

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  LP  +G+  NL +    NN +T+LP+++ D   +  L +  N+LT L    +  
Sbjct: 228 NNRLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIEDLQNLKILSLGSNQLTTLPKE-VGK 286

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L EL    N L  +P+ IG+L  L  L+L+ N+  ++P  I     L +  +G N L
Sbjct: 287 LQNLQELYLYNNRLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQL 346

Query: 243 SALPAELGKLSKLGTLDLHSNQL-------------KEYCVEACQL-------------- 275
           + LP E+  L  L TLDL  NQL             ++  +E  QL              
Sbjct: 347 TTLPEEIWNLQNLKTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTLPKEIGKLQKLK 406

Query: 276 --------------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
                               +L  L L +N L+ LP EIG +  L+ L L GNP
Sbjct: 407 KLYLYNNRLTTLPIEIGNLQKLQTLSLGHNQLTTLPKEIGNLQKLKMLDLGGNP 460


>gi|255081536|ref|XP_002507990.1| predicted protein [Micromonas sp. RCC299]
 gi|226523266|gb|ACO69248.1| predicted protein [Micromonas sp. RCC299]
          Length = 323

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/301 (35%), Positives = 166/301 (55%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L++  LR+VP E+              +   L  L L  N +  +  ++  L  L  L
Sbjct: 33  LYLNDNQLRNVPAEI-------------GQLTSLVTLDLHANQLTSVPAEIGQLTSLVRL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+ +PA IG+L  L  L +S N ++ +P EIG  T+L     S NQL  +P+ +
Sbjct: 80  DLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSVPAEI 139

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L+    SNN +TS+P ++   + +++L + GNKLT +    I   T L +L  + 
Sbjct: 140 GQLTSLAHLYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAE-IGQLTSLEKLDLAG 198

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L+LH N++ S+P+ I    SL E Y+  N L+++PAE+G+L+
Sbjct: 199 NQLTSLPAEIGQLMSLTELNLHANQLTSVPAEIGQLTSLTELYLNANQLTSVPAEIGQLT 258

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L +L L +NQL+    E  QL  L  L L +N L+ LP EIG++T+L  L L GN L +
Sbjct: 259 SLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEIGQLTSLMMLHLNGNQLTS 318

Query: 313 L 313
           L
Sbjct: 319 L 319



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 167/331 (50%), Gaps = 38/331 (11%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L VL ++ N+L  +PA IG+L  L +LD+  N +  +P EIG  T+LV+ D   NQL  +
Sbjct: 30  LRVLYLNDNQLRNVPAEIGQLTSLVTLDLHANQLTSVPAEIGQLTSLVRLDLQVNQLTSV 89

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+ +G+  +L+    S N + S+P ++   + ++ L +  N+LT +    I   T L  L
Sbjct: 90  PAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSVPAE-IGQLTSLAHL 148

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L  +P  IG L+ L  L L+ N++ S+P+ I    SL +  +  N L++LPAE+
Sbjct: 149 YISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAEIGQLTSLEKLDLAGNQLTSLPAEI 208

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L  L+LH+NQL     E  QL  L+ L L+ N L+ +P EIG++T+L  L L  N
Sbjct: 209 GQLMSLTELNLHANQLTSVPAEIGQLTSLTELYLNANQLTSVPAEIGQLTSLESLFLGNN 268

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            LR + +                                 I   T L    K L LE   
Sbjct: 269 QLRNVLAE--------------------------------IGQLTSL----KWLYLEDNK 292

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           L+++P+EI +   +  L L+ N +  LP E+
Sbjct: 293 LTSLPAEIGQLTSLMMLHLNGNQLTSLPAEI 323



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 37/260 (14%)

Query: 12  GSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLT 71
             L LS   L  VP E+              +   L  L L+ N +  +  ++  L  L 
Sbjct: 100 AGLFLSRNQLLSVPAEI-------------GQLTSLAHLYLSRNQLTSVPAEIGQLTSLA 146

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L +S+N+L+ +PA IG+L  L  L ++ N +  +P EIG  T+L K D + NQL  LP+
Sbjct: 147 HLYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAEIGQLTSLEKLDLAGNQLTSLPA 206

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+ ++L++     N +TS+P +                        I   T LTEL  
Sbjct: 207 EIGQLMSLTELNLHANQLTSVPAE------------------------IGQLTSLTELYL 242

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N L  +P  IG L+ L  L L  N++ ++ + I    SL   Y+ +N L++LPAE+G+
Sbjct: 243 NANQLTSVPAEIGQLTSLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEIGQ 302

Query: 252 LSKLGTLDLHSNQLKEYCVE 271
           L+ L  L L+ NQL     E
Sbjct: 303 LTSLMMLHLNGNQLTSLPAE 322



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 120/246 (48%), Gaps = 37/246 (15%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++++L+++G  LT      +   + L  L  + N L  +P  IG L+ L+ LDLH N++ 
Sbjct: 5   RVNELELDGLGLTGAVPAEVGRLSALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHANQLT 64

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
           S+P+ I    SL    +  N L+++PAE+G+L+ L  L L  NQL     E  QL  L+ 
Sbjct: 65  SVPAEIGQLTSLVRLDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAH 124

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L LS N L+ +P EIG++T+L  L ++ N L ++         PA +  L S        
Sbjct: 125 LYLSRNQLTSVPAEIGQLTSLAHLYISNNQLTSV---------PAEIGQLTSL------- 168

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                                EL L G  L+++P+EI +   + KLDL+ N +  LP E+
Sbjct: 169 --------------------TELYLNGNKLTSVPAEIGQLTSLEKLDLAGNQLTSLPAEI 208

Query: 400 SSCASL 405
               SL
Sbjct: 209 GQLMSL 214


>gi|255084109|ref|XP_002508629.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
 gi|226523906|gb|ACO69887.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
          Length = 1098

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 194/367 (52%), Gaps = 15/367 (4%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W+   L +L L  N +  +  ++  L  LT LN+S N+L+ +PA IG+L   +   +S N
Sbjct: 423 WQLTPLTELYLYGNQLTSVPAEIGQLRSLTELNLSSNQLTNVPAEIGQLRSRREFGLSGN 482

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P EIG  T+L +F  S NQL  +P+ +GR  +L      +N +TS+P ++     
Sbjct: 483 QLTSVPAEIGQLTSLEEFGLSGNQLTSVPAEIGRLTSLERLWLEDNKLTSVPAEIGRLRA 542

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L + GN+LT +    +   T L +L    N L  +P  +G L+ L+ L+L  NR+ S
Sbjct: 543 LEWLYLHGNQLTSVPAE-VGQLTSLEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNNRLTS 601

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P+ I    SL E ++ +N L+++PAE+ +L+ L  L L  NQL     E  QL  L  L
Sbjct: 602 VPAEIGQLTSLWELWLHDNELTSVPAEIWQLTSLRELSLAVNQLTSVPAEIGQLTSLKTL 661

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           +L  N L+ +P EIG++T+L  L L  N L ++ + ++       L  L S   E  D+ 
Sbjct: 662 ELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVPADILQQ-----LTSLESL--ELGDNH 714

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNL-SAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            ++  E++  + +      KEL+L G  L +++P+EI +   +  LDL  N +  +P E+
Sbjct: 715 LTSWPEEIGQLTSL-----KELTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEI 769

Query: 400 SSCASLQ 406
               SL+
Sbjct: 770 GQLTSLR 776



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 178/336 (52%), Gaps = 19/336 (5%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L V  N L+ +PA IG L  L+ L +S N +  +P+EIG  TA+ +   ++NQL  LP  
Sbjct: 270 LVVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEEIGQLTAMTELYLNANQLTSLPVE 329

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  +L   +   N +TS+P ++   + +  LD+  N+LT +    I   T L  L   
Sbjct: 330 IGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAE-IGQLTSLISLHLG 388

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           KN L  +P  IG L+ +  L L+ N++ S+P+ I     L E Y+  N L+++PAE+G+L
Sbjct: 389 KNQLTSVPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGNQLTSVPAEIGQL 448

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L SNQL     E  QLR      LS N L+ +P EIG++T+L +  L+GN L 
Sbjct: 449 RSLTELNLSSNQLTNVPAEIGQLRSRREFGLSGNQLTSVPAEIGQLTSLEEFGLSGNQLT 508

Query: 312 TLRSSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           ++         PA +  L S  RL   ED++ ++   ++     RL    + L L G  L
Sbjct: 509 SV---------PAEIGRLTSLERL-WLEDNKLTSVPAEI----GRLRAL-EWLYLHGNQL 553

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +++P+E+ +   + KLDL  N +  +P E+    SL
Sbjct: 554 TSVPAEVGQLTSLEKLDLQHNQLTSVPVEVGQLTSL 589



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 203/411 (49%), Gaps = 36/411 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L    L  VP E+ +                L+ L L +N +  +  ++  L  L  L
Sbjct: 339 LQLGGNQLTSVPAEIRQ-------------LTSLKCLDLNNNQLTSVPAEIGQLTSLISL 385

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+ +PA IG+L  +  L ++ N +  +P EI   T L +     NQL  +P+ +
Sbjct: 386 HLGKNQLTSVPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGNQLTSVPAEI 445

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L++   S+N +T++P ++       +  + GN+LT +    I   T L E   S 
Sbjct: 446 GQLRSLTELNLSSNQLTNVPAEIGQLRSRREFGLSGNQLTSVPAE-IGQLTSLEEFGLSG 504

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L RL L  N++ S+P+ I    +L   Y+  N L+++PAE+G+L+
Sbjct: 505 NQLTSVPAEIGRLTSLERLWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLT 564

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  LDL  NQL    VE  QL  L  L+L NN L+ +P EIG++T+L +L L  N L +
Sbjct: 565 SLEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTS 624

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS-VTS-KELSLEGMNLS 370
           +         PA +  L S        E S     L ++   +  +TS K L L G  L+
Sbjct: 625 V---------PAEIWQLTSL------RELSLAVNQLTSVPAEIGQLTSLKTLELGGNQLT 669

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPP----ELSSCASLQVKFSDLVTNKE 417
           ++P+EI +   +  LDL  N +  +P     +L+S  SL++  + L +  E
Sbjct: 670 SVPAEIGQLTSLETLDLDDNKLTSVPADILQQLTSLESLELGDNHLTSWPE 720



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 190/385 (49%), Gaps = 38/385 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELH--------------- 91
           L++L L+ N +  + E++  L  +T L ++ N+L+ LP  IG+L                
Sbjct: 290 LRELWLSGNRLTSVPEEIGQLTAMTELYLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSV 349

Query: 92  --------MLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
                    LK LD++ N +  +P EIG  T+L+      NQL  +P+ +G+   +++  
Sbjct: 350 PAEIRQLTSLKCLDLNNNQLTSVPAEIGQLTSLISLHLGKNQLTSVPAEIGQLTAMTELY 409

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
            + N +TSLP ++   + +++L + GN+LT +    I     LTEL  S N L  +P  I
Sbjct: 410 LNANQLTSLPAEIWQLTPLTELYLYGNQLTSVPAE-IGQLRSLTELNLSSNQLTNVPAEI 468

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L       L  N++ S+P+ I    SL EF +  N L+++PAE+G+L+ L  L L  N
Sbjct: 469 GQLRSRREFGLSGNQLTSVPAEIGQLTSLEEFGLSGNQLTSVPAEIGRLTSLERLWLEDN 528

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           +L     E  +LR L  L L  N L+ +P E+G++T+L KL L  N L ++         
Sbjct: 529 KLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSV--------- 579

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
           P  +  L S +  N  +   T+    I   T L     EL L    L+++P+EIW+   +
Sbjct: 580 PVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSL----WELWLHDNELTSVPAEIWQLTSL 635

Query: 383 TKLDLSRNSIQELPPELSSCASLQV 407
            +L L+ N +  +P E+    SL+ 
Sbjct: 636 RELSLAVNQLTSVPAEIGQLTSLKT 660



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 181/389 (46%), Gaps = 53/389 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L HN +  +  ++  L  L  LN+ +N+L+ +PA IG+L  L  L +  N +  +
Sbjct: 566 LEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTSV 625

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EI   T+L +   + NQL  +P+ +G+  +L   +   N +TS+P ++   + +  LD
Sbjct: 626 PAEIWQLTSLRELSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLD 685

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ NKLT +  +++   T L  L    N L   PE IG L+ L  L L            
Sbjct: 686 LDDNKLTSVPADILQQLTSLESLELGDNHLTSWPEEIGQLTSLKELTLR----------- 734

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
                      GN   +++PAE+G+L+ L TLDL  NQL     E  QL  L  L L++N
Sbjct: 735 -----------GNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEIGQLTSLRWLWLNDN 783

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTL------------RSSLVNGPT----------- 322
            L+ +P E+G++T+L  L L GN L  +            R  L +G T           
Sbjct: 784 RLTSVPAELGQLTSLEGLWLKGNQLTIVPAEIRELKAAGCRVDLDDGVTMDEGDDARALR 843

Query: 323 --PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
              A+   L+   PE+E  E        +TM     V   EL + G+   A+P+E+    
Sbjct: 844 TWRAMCPDLQGMWPEDEQPEDWYR----VTMENDGRVVQLELEVFGLT-GAVPAELGRLS 898

Query: 381 EITKLDLSRNSIQELPPELSSCASLQVKF 409
            +  L L  N +  LP E+    SL+V +
Sbjct: 899 ALRWLSLHGNQVTSLPAEIGQLTSLEVLY 927



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 198/441 (44%), Gaps = 61/441 (13%)

Query: 13   SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            +L+L +  L  VP ++ +                L+ L L  N++    E++  L  L  
Sbjct: 683  TLDLDDNKLTSVPADILQQL------------TSLESLELGDNHLTSWPEEIGQLTSLKE 730

Query: 73   LNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L +  NKL+  +PA IG+L  LK+LD+  N +  +P EIG  T+L     + N+L  +P+
Sbjct: 731  LTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEIGQLTSLRWLWLNDNRLTSVPA 790

Query: 132  SLGRCLNLSDFKASNNCITSLPEDLADCSKMS-KLDV-------EGNKLTVLSN------ 177
             LG+  +L       N +T +P ++ +      ++D+       EG+    L        
Sbjct: 791  ELGQLTSLEGLWLKGNQLTIVPAEIRELKAAGCRVDLDDGVTMDEGDDARALRTWRAMCP 850

Query: 178  NLIASW------------TM-----LTEL-IASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            +L   W            TM     + +L +    L   +P  +G LS L  L LH N++
Sbjct: 851  DLQGMWPEDEQPEDWYRVTMENDGRVVQLELEVFGLTGAVPAELGRLSALRWLSLHGNQV 910

Query: 220  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
             S+P+ I    SL   Y+  N L+++PAE+G+L+ L  L L+ NQL     E  QL  L+
Sbjct: 911  TSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLRELYLYENQLTSVPAEIGQLTALA 970

Query: 279  VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
             L+L +N L+ LP EIG++  L KL L  N L ++         PA +  L S       
Sbjct: 971  RLELRDNQLTSLPAEIGQLAALEKLSLDSNQLTSV---------PAEIGQLTSLKTLGLS 1021

Query: 339  SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                T+    I   T L    KEL L G  L+++P EI +   +  L L +N +  +P  
Sbjct: 1022 DNMLTSVPADIGQLTSL----KELRLGGNQLTSVPEEIGQLTSLQGLYLWQNRLTSVPAA 1077

Query: 399  LSSCASL--QVKFSDLVTNKE 417
            +    ++   V   D VT  E
Sbjct: 1078 IRELRAVGCYVNLDDGVTVDE 1098



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 22/217 (10%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            L   +P  +G L+ L  L +  N + S+P+ I    SL E ++  N L+++P E+G+L+
Sbjct: 252 GLTGAVPAEVGRLTALRELVVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEEIGQLT 311

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +  L L++NQL    VE  QLR L +L L  N L+ +P EI ++T+L+ L L  N L +
Sbjct: 312 AMTELYLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTS 371

Query: 313 LRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
           +         PA +  L S     L +N+ +        L  M         EL L    
Sbjct: 372 V---------PAEIGQLTSLISLHLGKNQLTSVPAEIGQLTAMT--------ELYLNANQ 414

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           L+++P+EIW+   +T+L L  N +  +P E+    SL
Sbjct: 415 LTSLPAEIWQLTPLTELYLYGNQLTSVPAEIGQLRSL 451


>gi|418755366|ref|ZP_13311573.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964377|gb|EKO32267.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 513

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 137/405 (33%), Positives = 195/405 (48%), Gaps = 25/405 (6%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWW-----EAVDLQKL---ILAHNNIEKLKED 63
           LNLSN  L  +PNE+   +N +E             E V LQ+L    LA N +  L ++
Sbjct: 66  LNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKE 125

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L + +N L+ LP+ IG L  LK L +  N +M +P EIG    L +     
Sbjct: 126 IGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLED 185

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL D   SNN +T+LP ++     + +L++  N L  L N  I   
Sbjct: 186 NQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNE-IGKL 244

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL  S N L  +P+ IG L  L  L L  N+++++P  I     L   Y+ NN L 
Sbjct: 245 QNLEELNLSNNQLITLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLE 304

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+GKL  L  L L  NQL     E   L+ L  LD+SNN L  LP EIGK+ +L++
Sbjct: 305 TLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNHLVTLPNEIGKLLSLKR 364

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L  N L TL         P  +  L++    N  +    T  + I     L      L
Sbjct: 365 LNLENNQLTTL---------PKEIGKLQNLPNLNLSNNQLATLPNEIGQLENLQY----L 411

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +LE   L  +P+EI +   +  L+L  N ++ LP E+    +L+V
Sbjct: 412 NLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGRLQNLKV 456



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 196/410 (47%), Gaps = 53/410 (12%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY++F+EA +       +D++ L L+ N +  L  ++  L  L  LN+S+N+L+ LP 
Sbjct: 24  NKVYRDFNEALKN-----PMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPN 78

Query: 86  AIGELHMLKSLDV------SF-----------------NSIMKIPDEIGSATALVKFDCS 122
            IG L  L+ LD+      +F                 N ++ +P EIG+   L      
Sbjct: 79  EIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLK 138

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N L  LPS +GR   L      NN + +LP+++     + +L +E N+LT L    I  
Sbjct: 139 NNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQE-IGQ 197

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L  S N L  +P  IG L  L RL+L  N ++++P+ I    +L E  + NN L
Sbjct: 198 LENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQL 257

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
             LP E+G+L +L  L L  NQL     E   L +L  L L NN L  LP EIGK+ +L+
Sbjct: 258 ITLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLK 317

Query: 302 KLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS-- 356
           +L L  N L TL     +L N P+                     +   L+T+   +   
Sbjct: 318 RLHLEHNQLITLPQEIGTLQNLPS------------------LDVSNNHLVTLPNEIGKL 359

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           ++ K L+LE   L+ +P EI +   +  L+LS N +  LP E+    +LQ
Sbjct: 360 LSLKRLNLENNQLTTLPKEIGKLQNLPNLNLSNNQLATLPNEIGQLENLQ 409



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 150/297 (50%), Gaps = 25/297 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L  N +  L +++  L  L  L+VS+N L+ LP  IG+L  LK L++S N ++ 
Sbjct: 177 NLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLIT 236

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L + + S+NQL  LP  +G+   L      +N + +LP+++    K+  L
Sbjct: 237 LPNEIGKLQNLEELNLSNNQLITLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYL 296

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N L  L N  I     L  L    N L  +P+ IG+L  L  LD+  N ++++P+ 
Sbjct: 297 YLKNNHLETLPNE-IGKLRSLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNHLVTLPNE 355

Query: 226 ISGCCSLAEFYMGNNALSALPAELGK-----------------------LSKLGTLDLHS 262
           I    SL    + NN L+ LP E+GK                       L  L  L+L +
Sbjct: 356 IGKLLSLKRLNLENNQLTTLPKEIGKLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLEN 415

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           NQLK    E  QL  L  L+L NN L  LP EIG++  L+ L L GN L TL   +V
Sbjct: 416 NQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIV 472



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 144/307 (46%), Gaps = 40/307 (13%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYK--NFDEAGEGDKWW--------EAVDLQKLILAHNNIE 58
           R+   LNLSN  L  +PNE+ K  N +E    +           +  +L+ L L HN + 
Sbjct: 222 RSLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQLITLPQEIGQLQELEWLHLEHNQLI 281

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
            L +++  L  L  L + +N L  LP  IG+L  LK L +  N ++ +P EIG+   L  
Sbjct: 282 TLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPS 341

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S+N L  LP+ +G+ L+L      NN +T+LP+++     +  L++  N+L  L   
Sbjct: 342 LDVSNNHLVTLPNEIGKLLSLKRLNLENNQLTTLPKEIGKLQNLPNLNLSNNQLATL--- 398

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                                P  IG L  L  L+L  N++ ++P+ I    +L    + 
Sbjct: 399 ---------------------PNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLE 437

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
           NN L  LP E+G+L  L  L+L  NQL     E   L+ L +L L N     +P  + + 
Sbjct: 438 NNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIVGLKHLQILKLKN-----IPALLSEK 492

Query: 298 TTLRKLL 304
            T+RKLL
Sbjct: 493 ETIRKLL 499



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 16/248 (6%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           +  K D E NK+    N  + +   +  L  S N L  +P  IG L +L  L+L  NR+ 
Sbjct: 15  RFCKRDAEKNKVYRDFNEALKNPMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLT 74

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
           ++P+ I    +L E  + +N L+  P E+ +L +L  L L  NQL     E   L +L  
Sbjct: 75  TLPNEIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQH 134

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLPENED 338
           L L NN L+ LP EIG++  L++L L  N L TL   +  G    L + YL       ED
Sbjct: 135 LYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEI--GKLQNLEQLYL-------ED 185

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           ++ +T  +++  +        ++L +   +L+ +P+EI +   + +L+LS N +  LP E
Sbjct: 186 NQLTTLPQEIGQLE-----NLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNE 240

Query: 399 LSSCASLQ 406
           +    +L+
Sbjct: 241 IGKLQNLE 248


>gi|383849806|ref|XP_003700527.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Megachile rotundata]
          Length = 604

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 216/458 (47%), Gaps = 83/458 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPN--------------EVYKNFDEAGEGDKWWE------ 43
           I+ +AR +G+LNLS+R L  VPN              E++   D   E ++WWE      
Sbjct: 30  IIISARKTGNLNLSSRGLSTVPNKVWSINELTDEEVKELHYELDYVHENERWWEQELLKT 89

Query: 44  ---------AVD--------LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
                     +D        L  L+L  N +E L  ++ NL  L VLN+S+NKL +LP  
Sbjct: 90  LDLSFNSLVVIDSKIECLSELTTLLLHDNLLENLPPEIGNLKKLEVLNLSNNKLKQLPHQ 149

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
             +L+ L+ L +  N + K+   IG    L   D S+N L ELP  +G  + L     S+
Sbjct: 150 FYQLNELRELCLKNNKLNKLSPAIGDLIMLTHLDLSNNNLSELPIGMGYLVRLKSLDLSH 209

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG-S 205
           N +T LP DL +   + KLD   N+L VL    +     +  ++   N L   P+  G +
Sbjct: 210 NLLTELPPDLTNIRALQKLDASCNQLEVLPP--MGDLRKVETVMLQTNKLTTFPDMSGCT 267

Query: 206 LSRLIRLDLHQNRILSIP-SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           L R+  L L  N I  I  S + G   L    +GNN +  +P ++ K+            
Sbjct: 268 LLRI--LHLADNNITEIDMSCLEGVGQLKVLTLGNNKIETIPEDIIKM------------ 313

Query: 265 LKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                     + L + DLS+N L+ +P  +G M  L++ ++ GN ++ +R+ ++   TP 
Sbjct: 314 ----------VYLEIFDLSHNKLTMIPSYVGIMPNLKQFVINGNDVQNIRADIIRCGTPR 363

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATR-------LSVTSKELSLEGMNLSAIPSEIW 377
           +LK++R  +    +S    TKE +I+ A +          ++K LSL G+NL+ +P E+ 
Sbjct: 364 ILKHIRQSI----ESTNLNTKECVISDANQSIYPDKYTMQSTKLLSLAGLNLTELPQEVL 419

Query: 378 E---AGEITKLDLSRNSIQELPPELSSCASLQVKFSDL 412
           E     ++  +DLSRN + ELP ++   A    K +DL
Sbjct: 420 ENACKADVGTVDLSRNKLSELPDQMCVIA----KVADL 453



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 212/468 (45%), Gaps = 104/468 (22%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLSN  L+ +P++ Y             +  +L++L L +N + KL   + +L +LT L
Sbjct: 136 LNLSNNKLKQLPHQFY-------------QLNELRELCLKNNKLNKLSPAIGDLIMLTHL 182

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S+N LSELP  +G L  LKSLD+S N + ++P ++ +  AL K D S NQL+ LP  +
Sbjct: 183 DLSNNNLSELPIGMGYLVRLKSLDLSHNLLTELPPDLTNIRALQKLDASCNQLEVLPP-M 241

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT----------------VLSN 177
           G    +       N +T+ P D++ C+ +  L +  N +T                 L N
Sbjct: 242 GDLRKVETVMLQTNKLTTFP-DMSGCTLLRILHLADNNITEIDMSCLEGVGQLKVLTLGN 300

Query: 178 NLIAS-------WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC- 229
           N I +          L     S N L  +P  +G +  L +  ++ N + +I + I  C 
Sbjct: 301 NKIETIPEDIIKMVYLEIFDLSHNKLTMIPSYVGIMPNLKQFVINGNDVQNIRADIIRCG 360

Query: 230 ---------------------CSLAE---------FYMGNNAL--------SALPAELGK 251
                                C +++         + M +  L        + LP E+ +
Sbjct: 361 TPRILKHIRQSIESTNLNTKECVISDANQSIYPDKYTMQSTKLLSLAGLNLTELPQEVLE 420

Query: 252 ---LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG-KMTTLRKLLLT 306
               + +GT+DL  N+L E   + C + +++ L L++N L+ LP  IG K   L+ L L+
Sbjct: 421 NACKADVGTVDLSRNKLSELPDQMCVIAKVADLKLTSNELTHLPEWIGEKYKHLQALDLS 480

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDL----ITMATRLSVTSKE 361
            N L +L S+L      +LLKYLR   +  N   +   +  D+    I +A   S+T  +
Sbjct: 481 RNFLESLPSTL------SLLKYLRELNISFNRYKKIPESVYDIDSLEILIANDNSITDID 534

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
                     +PS + +  ++  L+L  N+I  +PPEL +  +++  F
Sbjct: 535 ----------VPS-LQKLQKLAILNLGNNNIGYVPPELGNLKNIRSLF 571



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 153/312 (49%), Gaps = 27/312 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N IE + ED+  +  L + ++SHNKL+ +P+ +G +  LK   ++ N +  I
Sbjct: 293 LKVLTLGNNKIETIPEDIIKMVYLEIFDLSHNKLTMIPSYVGIMPNLKQFVINGNDVQNI 352

Query: 107 PDEI---GS------------ATALVKFDC---SSNQLKELPSSLGRCLNLSDFKASNNC 148
             +I   G+            +T L   +C    +NQ         +   L      N  
Sbjct: 353 RADIIRCGTPRILKHIRQSIESTNLNTKECVISDANQSIYPDKYTMQSTKLLSLAGLN-- 410

Query: 149 ITSLPEDLAD--C-SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG- 204
           +T LP+++ +  C + +  +D+  NKL+ L + +      + +L  + N L  +PE IG 
Sbjct: 411 LTELPQEVLENACKADVGTVDLSRNKLSELPDQMCV-IAKVADLKLTSNELTHLPEWIGE 469

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
               L  LDL +N + S+PS++S    L E  +  N    +P  +  +  L  L  + N 
Sbjct: 470 KYKHLQALDLSRNFLESLPSTLSLLKYLRELNISFNRYKKIPESVYDIDSLEILIANDNS 529

Query: 265 LKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           + +  V + Q   +L++L+L NN++  +PPE+G +  +R L L+GN  +  R +++   T
Sbjct: 530 ITDIDVPSLQKLQKLAILNLGNNNIGYVPPELGNLKNIRSLFLSGNLFKQPRQAILAKST 589

Query: 323 PALLKYLRSRLP 334
             +L YLR R+P
Sbjct: 590 EEILAYLRDRIP 601


>gi|254424572|ref|ZP_05038290.1| Miro-like protein [Synechococcus sp. PCC 7335]
 gi|196192061|gb|EDX87025.1| Miro-like protein [Synechococcus sp. PCC 7335]
          Length = 1260

 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 123/372 (33%), Positives = 192/372 (51%), Gaps = 18/372 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N +  L E +  L  LT L++S N+LS LP  +G+L  L SLD+SFN +  +
Sbjct: 164 LTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTL 223

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +G   +L   + SSNQL  LP  +G+  +L+    S+N +++LPE +     ++ L 
Sbjct: 224 PEVVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLY 283

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L+ L    +     LT L  S N L+ +PE +G L  L  L+L  N++ ++P  +
Sbjct: 284 LRSNQLSTLPEA-VGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEVV 342

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL   Y+ +N LS LP  +G+L  L +L+L SNQL        QL+ L+ LDLS+N
Sbjct: 343 GQLQSLTSLYLSSNQLSTLPEAVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSN 402

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            LS LP  +G++ +L  L L  N L TL         P  +  L+S    +  S   +T 
Sbjct: 403 QLSTLPEVVGQLQSLTSLYLRSNQLSTL---------PEAVGQLQSLTSLDLSSNQLSTL 453

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP---ELSSC 402
            +++     L+     L+L    LS +P  + +   +T LDLS N +  LP    +L S 
Sbjct: 454 PEVVGQLQSLT----SLNLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSL 509

Query: 403 ASLQVKFSDLVT 414
            SL ++ + L T
Sbjct: 510 TSLDLRSNQLST 521



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 129/386 (33%), Positives = 200/386 (51%), Gaps = 21/386 (5%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D+     +L+ L LA+N  E++ E +  L  L  LN+S N+LS LP  +G+L  L SL +
Sbjct: 65  DEIGRLTELRSLFLAYNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYL 124

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N +  +P+ +G   +L   D SSNQL  LP  +G+  +L+     +N +++LPE +  
Sbjct: 125 RSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQQ-SLTSLNLRSNQLSTLPEVVGQ 183

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              ++ LD+  N+L+ L   ++     LT L  S N L+ +PE +G L  L  L+L  N+
Sbjct: 184 LQSLTSLDLSSNQLSTLP-EVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTSLNLSSNQ 242

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           + ++P  +    SL    + +N LS LP  +G+L  L +L L SNQL        QL+ L
Sbjct: 243 LSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSL 302

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLPEN 336
           + LDLS+N LS LP  +G++ +L  L L  N L TL    V G   +L   YL S     
Sbjct: 303 TSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPE--VVGQLQSLTSLYLSS----- 355

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
             ++ ST  E +  +    S+TS  L+L    LS +P  + +   +T LDLS N +  LP
Sbjct: 356 --NQLSTLPEAVGQLQ---SLTS--LNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLP 408

Query: 397 P---ELSSCASLQVKFSDLVTNKESC 419
               +L S  SL ++ + L T  E+ 
Sbjct: 409 EVVGQLQSLTSLYLRSNQLSTLPEAV 434



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 179/361 (49%), Gaps = 38/361 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L+ N +  L E +  L  LT LN+  N+LS LP  +G+L  L SL +S N +  +
Sbjct: 302 LTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEVVGQLQSLTSLYLSSNQLSTL 361

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +G   +L   + SSNQL  LP  +G+  +L+    S+N +++LPE +     ++ L 
Sbjct: 362 PEAVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLY 421

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L+ L    +     LT L  S N L+ +PE +G L  L  L+L  N++ ++P ++
Sbjct: 422 LRSNQLSTLPEA-VGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEAV 480

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL    + +N LS LP  +G+L  L +LDL SNQL        QL+ L+ LDLS+N
Sbjct: 481 GQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLRSNQLSTLPEVVGQLQSLTSLDLSSN 540

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            LS LP  +G++ +L  L L  N L TL         P ++  L+               
Sbjct: 541 QLSTLPEVVGQLQSLTSLYLRSNQLSTL---------PEVIGQLQ--------------- 576

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                     S+TS  L L    LS +P +I +   +  L L  N +++LP ELS    L
Sbjct: 577 ----------SLTS--LDLSDNQLSELPRQICQLDTLCSLFLGGNFLEQLPAELSRLLHL 624

Query: 406 Q 406
           +
Sbjct: 625 E 625



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 181/352 (51%), Gaps = 16/352 (4%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           NN++ L +++  L  L  L +++N+  E+P  +G L  L+SL++S N +  +P+ +G   
Sbjct: 58  NNLQTLPDEIGRLTELRSLFLAYNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQ 117

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L      SNQL  LP  +G+  +L+    S+N +++LPE +   S ++ L++  N+L+ 
Sbjct: 118 SLTSLYLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQQS-LTSLNLRSNQLST 176

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L   ++     LT L  S N L+ +PE +G L  L  LDL  N++ ++P  +    SL  
Sbjct: 177 LP-EVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTS 235

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 293
             + +N LS LP  +G+L  L +LDL SNQL        QL+ L+ L L +N LS LP  
Sbjct: 236 LNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEA 295

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           +G++ +L  L L+ N L TL         P ++  L+S    N  S   +T  +++    
Sbjct: 296 VGQLQSLTSLDLSSNQLSTL---------PEVVGQLQSLTSLNLRSNQLSTLPEVVGQLQ 346

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            L+     L L    LS +P  + +   +T L+LS N +  LP  +    SL
Sbjct: 347 SLT----SLYLSSNQLSTLPEAVGQLQSLTSLNLSSNQLSTLPEVVGQLQSL 394



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 142/287 (49%), Gaps = 24/287 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N +  L E +  L  LT L++S N+LS LP  +G+L  L SL++  N +  +
Sbjct: 417 LTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTL 476

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +G   +L   D SSNQL  LP  +G+  +L+     +N +++LPE +     ++ LD
Sbjct: 477 PEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLRSNQLSTLPEVVGQLQSLTSLD 536

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L+ L   ++     LT L    N L+ +PE IG L  L  LDL  N++  +P  I
Sbjct: 537 LSSNQLSTLP-EVVGQLQSLTSLYLRSNQLSTLPEVIGQLQSLTSLDLSDNQLSELPRQI 595

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL----------HSNQLKEYC------- 269
               +L   ++G N L  LPAEL +L  L  L L          + N L+ +        
Sbjct: 596 CQLDTLCSLFLGGNFLEQLPAELSRLLHLEKLSLGSASLIFDSYYHNVLRAFGASKQGNK 655

Query: 270 ---VEACQL---RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  C      L VLDLS N LS +  +I  +  L+++ L GNPL
Sbjct: 656 LTHISDCLFSLPSLEVLDLSFNQLSRVDSKIQSLEKLKQIDLRGNPL 702



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 177/357 (49%), Gaps = 26/357 (7%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSF---------NSIMKIPDEIGSATALVKFDC 121
           + L+++   + ELP  IG+L  LK+L +           N++  +PDEIG  T L     
Sbjct: 19  STLDLAGMGIDELPPEIGKLTKLKTLVLGLWDKQRRRRGNNLQTLPDEIGRLTELRSLFL 78

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           + NQ +E+P  +GR   L     S+N +++LPE +     ++ L +  N+L+ L   ++ 
Sbjct: 79  AYNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLP-EVVG 137

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               LT L  S N L+ +PE +G  S L  L+L  N++ ++P  +    SL    + +N 
Sbjct: 138 QLQSLTSLDLSSNQLSTLPEVVGQQS-LTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSNQ 196

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           LS LP  +G+L  L +LDL  NQL        QL+ L+ L+LS+N LS LP  +G++ +L
Sbjct: 197 LSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTSLNLSSNQLSTLPEVVGQLQSL 256

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSR----LPENEDSEASTTKEDLIT--MAT 353
             L L+ N L TL    V G   +L   YLRS     LPE      S T  DL +  ++T
Sbjct: 257 TSLDLSSNQLSTLPE--VVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLST 314

Query: 354 RLSVTSKELSLEGMN-----LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              V  +  SL  +N     LS +P  + +   +T L LS N +  LP  +    SL
Sbjct: 315 LPEVVGQLQSLTSLNLRSNQLSTLPEVVGQLQSLTSLYLSSNQLSTLPEAVGQLQSL 371



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 132/283 (46%), Gaps = 26/283 (9%)

Query: 149 ITSLPEDLADCSKMSKLDV---------EGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
           I  LP ++   +K+  L +          GN L  L +  I   T L  L  + N    +
Sbjct: 28  IDELPPEIGKLTKLKTLVLGLWDKQRRRRGNNLQTLPDE-IGRLTELRSLFLAYNQFEEI 86

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           PE +G L +L  L+L  N++ ++P  +    SL   Y+ +N LS LP  +G+L  L +LD
Sbjct: 87  PEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEVVGQLQSLTSLD 146

Query: 260 LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           L SNQL        Q  L+ L+L +N LS LP  +G++ +L  L L+ N L TL      
Sbjct: 147 LSSNQLSTLPEVVGQQSLTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTL------ 200

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
              P ++  L+S    +      +T  +++     L+     L+L    LS +P  + + 
Sbjct: 201 ---PEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLT----SLNLSSNQLSTLPEVVGQL 253

Query: 380 GEITKLDLSRNSIQELPP---ELSSCASLQVKFSDLVTNKESC 419
             +T LDLS N +  LP    +L S  SL ++ + L T  E+ 
Sbjct: 254 QSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAV 296


>gi|456982914|gb|EMG19366.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 432

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 193/385 (50%), Gaps = 20/385 (5%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           +V  E Y++  +A         +D++ LIL+   +  L ++++ L  L +L++ HN+L+ 
Sbjct: 31  EVEPEAYQDLTKA-----LQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTA 85

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ LD+SFNS+  +P E+G    L + + +S +L  LP  +G+  NL + 
Sbjct: 86  LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQEL 145

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             S N +T+LP+++     + +LD+  N+L  L    I     L EL  + N L  +P+ 
Sbjct: 146 DLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPME-IGQLKNLQELDLNSNKLTTLPKE 204

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           I  L  L  LDLH+N++ ++P  I    +L    +    L+ LP E+G+L  L TL+L  
Sbjct: 205 IRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLD 264

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL     E  +L+ L +L L  N ++ LP EIG++  L++L L  N L TL        
Sbjct: 265 NQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTL-------- 316

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
            P  +  L++      D    TT    I     L V    L L+   L+ +P EI +   
Sbjct: 317 -PKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRV----LDLDNNQLTTLPKEIGQLQN 371

Query: 382 ITKLDLSRNSIQELPPELSSCASLQ 406
           + +L L  N +   P E+    +LQ
Sbjct: 372 LQELCLDENQLTTFPKEIRQLKNLQ 396



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 15/298 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+++ L  +P E+              +  +LQ+L L+ N++  L +++  L  L  L
Sbjct: 122 LNLNSQKLTTLPKEI-------------GQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 168

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+ LP  IG+L  L+ LD++ N +  +P EI     L + D   NQL  LP  +
Sbjct: 169 DLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEI 228

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL         +T+LP+++ +   +  L++  N+LT L    I     L  L+  +
Sbjct: 229 GQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKE-IGELQNLEILVLRE 287

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +P+ IG L  L RLDLHQN++ ++P  I    +L E  +  N L+ LP E+ +L 
Sbjct: 288 NRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQ 347

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L  LDL +NQL     E  QL+ L  L L  N L+  P EI ++  L++L L  NPL
Sbjct: 348 NLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 405



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 156/346 (45%), Gaps = 56/346 (16%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL +S  KL+ LP  I +L  LK LD+  N +  +P EIG    L + D S N L  LP 
Sbjct: 52  VLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     ++  +T+LP+++     + +LD+  N LT L                
Sbjct: 112 EVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ +G L  L RLDLHQNR+ ++P  I    +L E  + +N L+ LP E+ +
Sbjct: 156 --------PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDLH NQL     E  QL+ L  L+L    L+ LP EIG++  L+ L L  N L
Sbjct: 208 LRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQL 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE--------- 361
            TL   +  G    L                    E L+    R++   KE         
Sbjct: 268 TTLPKEI--GELQNL--------------------EILVLRENRITALPKEIGQLQNLQR 305

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           L L    L+ +P EI +   + +L L  N +  LP E+    +L+V
Sbjct: 306 LDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRV 351



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 13/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL +  L  +P E+              E  +L+ L+L  N I  L +++  L  L  
Sbjct: 259 TLNLLDNQLTTLPKEI-------------GELQNLEILVLRENRITALPKEIGQLQNLQR 305

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+ LP  IG+L  L+ L +  N +  +P EI     L   D  +NQL  LP  
Sbjct: 306 LDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKE 365

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           +G+  NL +     N +T+ P+++     + +L +  N L+
Sbjct: 366 IGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLS 406



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 52/106 (49%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L  L +  N+L+ LP  I +L  L+ LD+  N +  
Sbjct: 302 NLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTT 361

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 362 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 407


>gi|421084250|ref|ZP_15545113.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410433150|gb|EKP77498.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 429

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 193/385 (50%), Gaps = 20/385 (5%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           +V  E Y++  +A         +D++ LIL+   +  L ++++ L  L +L++ HN+L+ 
Sbjct: 31  EVEPEAYQDLTKA-----LQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTA 85

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ LD+SFNS+  +P E+G    L + + +S +L  LP  +G+  NL + 
Sbjct: 86  LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQEL 145

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             S N +T+LP+++     + +LD+  N+L  L    I     L EL  + N L  +P+ 
Sbjct: 146 DLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPME-IGQLKNLQELDLNSNKLTTLPKE 204

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           I  L  L  LDLH+N++ ++P  I    +L    +    L+ LP E+G+L  L TL+L  
Sbjct: 205 IRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLD 264

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL     E  +L+ L +L L  N ++ LP EIG++  L++L L  N L TL        
Sbjct: 265 NQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQRLDLHQNQLTTL-------- 316

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
            P  +  L++      D    TT    I     L V    L L+   L+ +P EI +   
Sbjct: 317 -PKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRV----LDLDNNQLTTLPKEIGQLQN 371

Query: 382 ITKLDLSRNSIQELPPELSSCASLQ 406
           + +L L  N +   P E+    +LQ
Sbjct: 372 LQELCLDENQLTTFPKEIRQLKNLQ 396



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 15/298 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+++ L  +P E+              +  +LQ+L L+ N++  L +++  L  L  L
Sbjct: 122 LNLNSQKLTTLPKEI-------------GQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 168

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+ LP  IG+L  L+ LD++ N +  +P EI     L + D   NQL  LP  +
Sbjct: 169 DLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEI 228

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL         +T+LP+++ +   +  L++  N+LT L    I     L  L+  +
Sbjct: 229 GQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKE-IGELQNLEILVLRE 287

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +P+ IG L  L RLDLHQN++ ++P  I    +L E  +  N L+ LP E+ +L 
Sbjct: 288 NRITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQ 347

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L  LDL +NQL     E  QL+ L  L L  N L+  P EI ++  L++L L  NPL
Sbjct: 348 NLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 405



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 156/346 (45%), Gaps = 56/346 (16%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL +S  KL+ LP  I +L  LK LD+  N +  +P EIG    L + D S N L  LP 
Sbjct: 52  VLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     ++  +T+LP+++     + +LD+  N LT L                
Sbjct: 112 EVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ +G L  L RLDLHQNR+ ++P  I    +L E  + +N L+ LP E+ +
Sbjct: 156 --------PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDLH NQL     E  QL+ L  L+L    L+ LP EIG++  L+ L L  N L
Sbjct: 208 LRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQL 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE--------- 361
            TL   +  G    L                    E L+    R++   KE         
Sbjct: 268 TTLPKEI--GELQNL--------------------EILVLRENRITALPKEIGQLQNLQR 305

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           L L    L+ +P EI +   + +L L  N +  LP E+    +L+V
Sbjct: 306 LDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRV 351



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 13/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL +  L  +P E+              E  +L+ L+L  N I  L +++  L  L  
Sbjct: 259 TLNLLDNQLTTLPKEI-------------GELQNLEILVLRENRITALPKEIGQLQNLQR 305

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+ LP  IG+L  L+ L +  N +  +P EI     L   D  +NQL  LP  
Sbjct: 306 LDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKE 365

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           +G+  NL +     N +T+ P+++     + +L +  N L+
Sbjct: 366 IGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLS 406



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 52/106 (49%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L  L +  N+L+ LP  I +L  L+ LD+  N +  
Sbjct: 302 NLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTT 361

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 362 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 407


>gi|428298451|ref|YP_007136757.1| small GTP-binding protein [Calothrix sp. PCC 6303]
 gi|428234995|gb|AFZ00785.1| small GTP-binding protein [Calothrix sp. PCC 6303]
          Length = 1408

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 201/378 (53%), Gaps = 13/378 (3%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L    N+I K+ E +  L  L  L+VS NK++E+P AI +L  L+ L VS N I +
Sbjct: 127 NLTQLYFNSNHISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITE 186

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ I + + L +   SSNQ+ E+P ++ + +NL + + S+N IT +PE +A  + + KL
Sbjct: 187 IPEAIANLSNLRELHVSSNQITEIPEAIAKLINLRELQVSSNKITEIPEVIAKLTNLRKL 246

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N++T +   +IA  T LT+L  S N +  + E +  L  L ++ LH N+I  IP +
Sbjct: 247 YLRNNQITEIP-EVIAKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKITEIPDA 305

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           ++   +L +  +  N ++ +P  L KL+ L  L L+SNQ+ E      +L  L+ LDLS 
Sbjct: 306 LAKLINLTQLDLSYNQITKIPEALAKLTNLTQLILYSNQITEIPEVIAKLTNLTQLDLSY 365

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN--GPTPALLKYLR-SRLPENEDSEA 341
           N ++ +P  + K+T L +L+L  N +  +  +L      T  +L Y R S +PE      
Sbjct: 366 NQITKIPEALAKLTNLTQLILYSNRISEIPEALAKLINLTQIILSYNRISEIPEALAKLT 425

Query: 342 STTKEDL-------ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
           + T+ DL       I  A    +   ++ L    ++ IP  + +   + +L LS N I E
Sbjct: 426 NLTQLDLSYNQITKIPEALAKLINLTQIILHSNKITEIPEALAKLTNLRQLYLSYNRITE 485

Query: 395 LPPELSSCASL-QVKFSD 411
           +P  L+   +L Q+  SD
Sbjct: 486 IPEALAKLTNLTQLNLSD 503



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 197/362 (54%), Gaps = 16/362 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L L++N I K+ E L  L  LT L +  N++SE+P A+ +L  L  + +S+N I +
Sbjct: 357 NLTQLDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPEALAKLINLTQIILSYNRISE 416

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ +   T L + D S NQ+ ++P +L + +NL+     +N IT +PE LA  + + +L
Sbjct: 417 IPEALAKLTNLTQLDLSYNQITKIPEALAKLINLTQIILHSNKITEIPEALAKLTNLRQL 476

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N++T +   L A  T LT+L  S N +  +P+ +  LS L +LDL++N+I  IP +
Sbjct: 477 YLSYNRITEIPEAL-AKLTNLTQLNLSDNQIIKIPKALAKLSNLTQLDLNRNKITEIPEA 535

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLS 283
           ++   +L + Y+ NN ++ +P  L KL+ L  LDL +N       EA      L+ L+L+
Sbjct: 536 LAKLTNLTQLYLRNNRITEIPEALAKLTNLTQLDLGTNYNISEIPEAITKLTNLTQLNLT 595

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           ++ ++ +P  I K+T L +L LT N +  +  ++        L    +++ E  ++ A  
Sbjct: 596 SSQITEIPEVIAKLTNLTQLNLTSNQIAEIPEAIAKLTNLTQLILTSNQITEIPEAIAK- 654

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                +T  T+L++TS +++        IP  I +   +T+L LS N I E+P  ++   
Sbjct: 655 -----LTNLTQLNLTSNQIT-------KIPEAIAKLTNLTQLILSYNQITEIPEAIAKLT 702

Query: 404 SL 405
           +L
Sbjct: 703 NL 704



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 192/368 (52%), Gaps = 37/368 (10%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D   + ++L +L L++N I K+ E L  L  LT L +  N+++E+P  I +L  L  LD+
Sbjct: 304 DALAKLINLTQLDLSYNQITKIPEALAKLTNLTQLILYSNQITEIPEVIAKLTNLTQLDL 363

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S+N I KIP+ +   T L +    SN++ E+P +L + +NL+    S N I+ +PE LA 
Sbjct: 364 SYNQITKIPEALAKLTNLTQLILYSNRISEIPEALAKLINLTQIILSYNRISEIPEALAK 423

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
            + +++LD+  N++T +   L A    LT++I   N +  +PE +  L+ L +L L  NR
Sbjct: 424 LTNLTQLDLSYNQITKIPEAL-AKLINLTQIILHSNKITEIPEALAKLTNLRQLYLSYNR 482

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           I  IP +++   +L +  + +N +  +P  L KLS L  LDL+ N++ E      +L  L
Sbjct: 483 ITEIPEALAKLTNLTQLNLSDNQIIKIPKALAKLSNLTQLDLNRNKITEIPEALAKLTNL 542

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
           + L L NN ++ +P  + K+T L +L L  N                   Y  S +PE  
Sbjct: 543 TQLYLRNNRITEIPEALAKLTNLTQLDLGTN-------------------YNISEIPE-- 581

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
               + TK   +T  T+L++TS +       ++ IP  I +   +T+L+L+ N I E+P 
Sbjct: 582 ----AITK---LTNLTQLNLTSSQ-------ITEIPEVIAKLTNLTQLNLTSNQIAEIPE 627

Query: 398 ELSSCASL 405
            ++   +L
Sbjct: 628 AIAKLTNL 635



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 198/374 (52%), Gaps = 29/374 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +LIL  N I ++ E L  L  LT + +S+N++SE+P A+ +L  L  LD+S+N I K
Sbjct: 380 NLTQLILYSNRISEIPEALAKLINLTQIILSYNRISEIPEALAKLTNLTQLDLSYNQITK 439

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ +     L +    SN++ E+P +L +  NL     S N IT +PE LA  + +++L
Sbjct: 440 IPEALAKLINLTQIILHSNKITEIPEALAKLTNLRQLYLSYNRITEIPEALAKLTNLTQL 499

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N++  +   L A  + LT+L  ++N +  +PE +  L+ L +L L  NRI  IP +
Sbjct: 500 NLSDNQIIKIPKAL-AKLSNLTQLDLNRNKITEIPEALAKLTNLTQLYLRNNRITEIPEA 558

Query: 226 ISGCCSLAEFYMGNNA-LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
           ++   +L +  +G N  +S +P  + KL+ L  L+L S+Q+ E      +L  L+ L+L+
Sbjct: 559 LAKLTNLTQLDLGTNYNISEIPEAITKLTNLTQLNLTSSQITEIPEVIAKLTNLTQLNLT 618

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---SSLVNGPTPALLKYLRSRLPE----- 335
           +N ++ +P  I K+T L +L+LT N +  +    + L N     L     +++PE     
Sbjct: 619 SNQIAEIPEAIAKLTNLTQLILTSNQITEIPEAIAKLTNLTQLNLTSNQITKIPEAIAKL 678

Query: 336 ----------NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
                     N+ +E       L T  T+L +TS +++        IP  I +   +T+L
Sbjct: 679 TNLTQLILSYNQITEIPEAIAKL-TNLTQLILTSNQIT-------EIPDAITKLTNLTQL 730

Query: 386 DLSRNSIQELPPEL 399
           DLS N I E+P E+
Sbjct: 731 DLSYNRISEIPLEI 744



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 190/373 (50%), Gaps = 16/373 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL ++ N +E + + +  +  L  L +   +L+E+P AI  L  L  L  + N I K
Sbjct: 81  NLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPEAIANLSNLTQLYFNSNHISK 140

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ I   + L +   SSN++ E+P ++ +  NL +   S+N IT +PE +A+ S + +L
Sbjct: 141 IPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITEIPEAIANLSNLREL 200

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V  N++T +    IA    L EL  S N +  +PE I  L+ L +L L  N+I  IP  
Sbjct: 201 HVSSNQITEIP-EAIAKLINLRELQVSSNKITEIPEVIAKLTNLRKLYLRNNQITEIPEV 259

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I+   +L +  +  N ++ +   L KL  L  + LH+N++ E      +L  L+ LDLS 
Sbjct: 260 IAKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKITEIPDALAKLINLTQLDLSY 319

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL--VNGPTPALLKYLR-SRLPENEDSEA 341
           N ++ +P  + K+T L +L+L  N +  +   +  +   T   L Y + +++PE      
Sbjct: 320 NQITKIPEALAKLTNLTQLILYSNQITEIPEVIAKLTNLTQLDLSYNQITKIPEALAKLT 379

Query: 342 STTKEDLITMATRLS---------VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
           + T+  LI  + R+S         +   ++ L    +S IP  + +   +T+LDLS N I
Sbjct: 380 NLTQ--LILYSNRISEIPEALAKLINLTQIILSYNRISEIPEALAKLTNLTQLDLSYNQI 437

Query: 393 QELPPELSSCASL 405
            ++P  L+   +L
Sbjct: 438 TKIPEALAKLINL 450



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 22/187 (11%)

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 293
           E  +    L+ LP E+GKL +L +L L   +L+ Y     ++   V   S N+L  LP E
Sbjct: 20  ELDLSGQELTELPGEIGKLQQLESLIL-GKKLEGYERVGSRILEKV---SGNNLKTLPLE 75

Query: 294 IGKMTTLRKLLLTGNPLRTL---RSSLVNGPTPALLKYLRSRLPENEDSEASTTK----- 345
           +  +  LRKL ++GNPL ++    + +++     L++   + +PE   + ++ T+     
Sbjct: 76  LLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPEAIANLSNLTQLYFNS 135

Query: 346 ------EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                  +LI   + L    +EL +    ++ IP  I +   + +L +S N I E+P  +
Sbjct: 136 NHISKIPELIAKLSNL----RELHVSSNKITEIPEAIAKLSNLRELHVSSNQITEIPEAI 191

Query: 400 SSCASLQ 406
           ++ ++L+
Sbjct: 192 ANLSNLR 198


>gi|456875041|gb|EMF90275.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 528

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/414 (31%), Positives = 196/414 (47%), Gaps = 22/414 (5%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           L L +  L  +P EV K  N +E   G      +        +LQKL L  N +  L ++
Sbjct: 84  LGLGSNQLTTLPKEVGKLQNLEELDLGQNQLTTLPEEIGKLQNLQKLNLNQNQLTTLPKE 143

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + NL  L  L +  N+ + LP AIG+L  L+ LD+  N +  +P EI     L + D   
Sbjct: 144 IGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQELDLGI 203

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G    L     ++N +T+LP+++    K+  L++  N+LT L    I + 
Sbjct: 204 NQLTTLPKEIGNLQKLQTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTTLPKE-IGNL 262

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L +L    N L  +P+ I  L +L  L L  N++ S+P  I    +L +  + +N L+
Sbjct: 263 QNLQQLYLYSNQLTTLPKEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLT 322

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 302
            +P E+G L KL  LDL  NQL     E   L +L  LDL NN L+ LP EIGK+   + 
Sbjct: 323 IIPKEIGNLQKLEELDLGQNQLTILPKEIGNLQKLQTLDLGNNKLTALPKEIGKLQNPQT 382

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM-ATRLSVTSKE 361
           L L  N L TL   + N      L    + L        S     ++T+ + RL+   KE
Sbjct: 383 LYLNRNQLTTLPKEIGNLQKLKWLYLAHNNLATIPQEIGSLQSLQVLTLNSNRLTTLPKE 442

Query: 362 L----SLEGMN-----LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +    +L+G+N     L+ +P EI +   +  LDLS N +   P E+     L+
Sbjct: 443 IGNLQNLQGLNLDKNQLTTLPKEIGKLRNLESLDLSENPLTSFPEEIGKLQHLK 496



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 195/400 (48%), Gaps = 24/400 (6%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDL--QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSEL 83
           N VY N  EA +       ++L  Q+   ++N +  L +++ NL  L +L +  N+L+ L
Sbjct: 35  NGVYYNLTEALQHPTDVRVLNLEPQEGGNSNNQLTTLPKEIENLQNLKILGLGSNQLTTL 94

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P  +G+L  L+ LD+  N +  +P+EIG    L K + + NQL  LP  +G    L +  
Sbjct: 95  PKEVGKLQNLEELDLGQNQLTTLPEEIGKLQNLQKLNLNQNQLTTLPKEIGNLQKLQELY 154

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
             +N   +LP+ +    K+ +LD+  N+LT L    I     L EL    N L  +P+ I
Sbjct: 155 LGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKE-IEKLQKLQELDLGINQLTTLPKEI 213

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G+L +L  L+L+ N++ ++P  I     L    + +N L+ LP E+G L  L  L L+SN
Sbjct: 214 GNLQKLQTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTTLPKEIGNLQNLQQLYLYSN 273

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           QL     E  +L +L  L LS+N L+ +P EIG +  L+KL L  N L  +   + N   
Sbjct: 274 QLTTLPKEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLTIIPKEIGN--- 330

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMAT------RLSVTSKE---------LSLEGM 367
             L K     L +N+ +       +L  + T      +L+   KE         L L   
Sbjct: 331 --LQKLEELDLGQNQLTILPKEIGNLQKLQTLDLGNNKLTALPKEIGKLQNPQTLYLNRN 388

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            L+ +P EI    ++  L L+ N++  +P E+ S  SLQV
Sbjct: 389 QLTTLPKEIGNLQKLKWLYLAHNNLATIPQEIGSLQSLQV 428



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/298 (34%), Positives = 149/298 (50%), Gaps = 15/298 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL++  L ++P E+ K                LQ L L HN +  L +++ NL  L  
Sbjct: 221 TLNLNHNQLTNLPKEIGK-------------LQKLQTLNLNHNQLTTLPKEIGNLQNLQQ 267

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  I +L  L+ L +S N +  +P+EIG+   L K    SNQL  +P  
Sbjct: 268 LYLYSNQLTTLPKEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLTIIPKE 327

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G    L +     N +T LP+++ +  K+  LD+  NKLT L    I        L  +
Sbjct: 328 IGNLQKLEELDLGQNQLTILPKEIGNLQKLQTLDLGNNKLTALPKE-IGKLQNPQTLYLN 386

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +N L  +P+ IG+L +L  L L  N + +IP  I    SL    + +N L+ LP E+G L
Sbjct: 387 RNQLTTLPKEIGNLQKLKWLYLAHNNLATIPQEIGSLQSLQVLTLNSNRLTTLPKEIGNL 446

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
             L  L+L  NQL     E  +LR L  LDLS N L+  P EIGK+  L+ L L   P
Sbjct: 447 QNLQGLNLDKNQLTTLPKEIGKLRNLESLDLSENPLTSFPEEIGKLQHLKWLRLENIP 504


>gi|170029739|ref|XP_001842749.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
 gi|167864068|gb|EDS27451.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
          Length = 612

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 221/451 (49%), Gaps = 45/451 (9%)

Query: 2   DRILKAART-----SGSLNLSNRSLRDVPNEVYK------------------NFDEAGEG 38
           D++L  AR      SG LNL+ + L  VP +V+                   + D   E 
Sbjct: 28  DKVLSKARIKQALKSGVLNLAGQGLATVPEKVWNLSDSEDCDKDAAAAAVRYDLDRTNEE 87

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D WW    L  L L+ N +  + E+++NL  LTVLN+  N L+ LP  IG L  L  L +
Sbjct: 88  DSWWNQKSLTTLDLSSNTLTSISENVKNLGDLTVLNLQDNALTALPEGIGCLTKLTKLSL 147

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N + ++P+   +   L   + S N   E+ +++   + L     S N + SLP  +  
Sbjct: 148 GRNKLSELPESFFNLRELKSLNLSHNDFAEIHANVSDLIMLEVLDISFNSLNSLPGGIGF 207

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             ++ +L +  N+LT L N+ I +   L +L  +KN L  +P  +G L +L  L +  N 
Sbjct: 208 LVRLQQLTLNNNRLTELPND-IVNLRNLHKLDLAKNDLKLLPPVMGELRKLECLYVQHND 266

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQL-R 276
           +  +P   +GC +L E ++ NN + ++PA+  + L +L  LDL  N++++   E   L  
Sbjct: 267 VGELP-DFTGCDALKELHISNNFIKSIPADFCENLPQLKILDLRDNKIEKLPDEISMLAS 325

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L+ LDLSNNS+S LP  +  +  L  L + GNP+R++R  ++   T  +LK L+ R    
Sbjct: 326 LTRLDLSNNSISSLPSCLSTLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLKDRDGPG 385

Query: 337 EDSEA------STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGE--ITKLDL 387
           + SE        +T  D+  M        + + +   NL  IP +++ +A E  +  +D+
Sbjct: 386 KSSEKVRVPFEESTFPDVYQMK-----KGRSMIVSNKNLIDIPEQVFLDAMEASVYNIDI 440

Query: 388 SRNSIQELPPELSSCAS----LQVKFSDLVT 414
           S+N + E+P  L+  AS    L V F+ L T
Sbjct: 441 SKNKLMEIPAGLTHLASIMTELNVSFNALKT 471



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 155/353 (43%), Gaps = 45/353 (12%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAA 86
           +Y   ++ GE   +     L++L +++N I+ +  D   NLP L +L++  NK+ +LP  
Sbjct: 260 LYVQHNDVGELPDFTGCDALKELHISNNFIKSIPADFCENLPQLKILDLRDNKIEKLPDE 319

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC---------- 136
           I  L  L  LD+S NSI  +P  + +   LV      N ++ +   + +C          
Sbjct: 320 ISMLASLTRLDLSNNSISSLPSCLSTLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLK 379

Query: 137 ---------------LNLSDFK------------ASNNCITSLPEDL---ADCSKMSKLD 166
                             S F              SN  +  +PE +   A  + +  +D
Sbjct: 380 DRDGPGKSSEKVRVPFEESTFPDVYQMKKGRSMIVSNKNLIDIPEQVFLDAMEASVYNID 439

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NKL  +   L    +++TEL  S N L  +P       R+  L++  N++  +P  +
Sbjct: 440 ISKNKLMEIPAGLTHLASIMTELNVSFNALKTIPMFFSQFERISYLNVSNNQLTDLPEVV 499

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDL 282
               +L E  + NN L  +P  + +L  L  L    N+++E       L    RL+ LD+
Sbjct: 500 GLLVTLRELNVANNQLKQIPPCVYELKGLEILLARGNKIEELDASEHGLGALPRLATLDV 559

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           +NN++  +PP +G +  +  L + GN  R  R  ++   T +++ YLR R+P+
Sbjct: 560 ANNNIKQVPPILGMLKNITTLEIIGNAFRQPRHQILEKGTESIMAYLRDRIPQ 612


>gi|427738478|ref|YP_007058022.1| hypothetical protein Riv7116_5077 [Rivularia sp. PCC 7116]
 gi|427373519|gb|AFY57475.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 982

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 134/412 (32%), Positives = 197/412 (47%), Gaps = 29/412 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N  L  +P E+              +  +LQ L L +N +  L  ++  L  L  
Sbjct: 434 SLYLDNNQLSSLPAEI-------------GQLTNLQSLYLFNNKLSSLPAEIGQLTNLQT 480

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+LS LPA IG+L  L+SL +  N +  +P EIG  T L  F   +  L  LP+ 
Sbjct: 481 LYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSFYLYNTLLSSLPAE 540

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL  F   N  ++SLP ++   + +    ++   L+ L  N I   T L  L  S
Sbjct: 541 IGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPAN-IFQLTNLQSLYLS 599

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L+ +   IG L+ L  L L  N++ S+P+ I    +L   Y+ NN LS+LPAE+G+L
Sbjct: 600 SNQLSILQAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQL 659

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           + L TL L +N+L     E  QL  L  L L NN LS LP EIG++T L+ L L  N L 
Sbjct: 660 TNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLS 719

Query: 312 TLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE------- 361
           +L +    L N  +  L     S LP   +    T  + L     +LS    E       
Sbjct: 720 SLPAEIGQLTNLQSLYLFNNKLSSLP--AEIGQLTNLQSLYLFNNQLSSLPAEIGQLTNL 777

Query: 362 --LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
             L L+   LS++P+EI +   +  L L  N +  LPP +    +LQ  + D
Sbjct: 778 QSLYLDNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPPGIGQLTNLQTLYLD 829



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 170/350 (48%), Gaps = 16/350 (4%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           +T L++S NKL+ LP  IG+L  L+SL +  N +  +P EIG  T L      +N+L  L
Sbjct: 409 VTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSL 468

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+ +G+  NL      NN ++SLP ++   + +  L +  NKL+ L    I   T L   
Sbjct: 469 PAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAE-IGQLTNLQSF 527

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                LL+ +P  IG L+ L    L    + S+P+ I    +L  FY+ N  LS+LPA +
Sbjct: 528 YLYNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPANI 587

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            +L+ L +L L SNQL     E  QL  L  L L NN LS LP EIG++T L+ L L  N
Sbjct: 588 FQLTNLQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNN 647

Query: 309 PLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---- 361
            L +L +    L N  T  L     S LP   +    T  + L     +LS    E    
Sbjct: 648 KLSSLPAEIGQLTNLQTLYLFNNKLSSLP--AEIGQLTNLQTLYLFNNKLSSLPAEIGQL 705

Query: 362 -----LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                L L+   LS++P+EI +   +  L L  N +  LP E+    +LQ
Sbjct: 706 TNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQ 755



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/276 (36%), Positives = 147/276 (53%), Gaps = 2/276 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +  +LQ   L +  +  L  ++  L  L  L +S N+LS L A IG+L  L+SL +  N 
Sbjct: 566 QLTNLQSFYLDNTLLSSLPANIFQLTNLQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNK 625

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG  T L      +N+L  LP+ +G+  NL      NN ++SLP ++   + +
Sbjct: 626 LSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNL 685

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             L +  NKL+ L    I   T L  L    N L+ +P  IG L+ L  L L  N++ S+
Sbjct: 686 QTLYLFNNKLSSLPAE-IGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSL 744

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P+ I    +L   Y+ NN LS+LPAE+G+L+ L +L L +NQL     E  QL  L  L 
Sbjct: 745 PAEIGQLTNLQSLYLFNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLY 804

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           L NN LS LPP IG++T L+ L L  N L +L + +
Sbjct: 805 LDNNQLSSLPPGIGQLTNLQTLYLDNNQLNSLPTEI 840



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 153/299 (51%), Gaps = 26/299 (8%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +  +LQ L L +N +  L  ++  L  L  L + +NKLS LPA IG+L  L++L +  N 
Sbjct: 612 QLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNK 671

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG  T L      +N+L  LP+ +G+  NL      NN ++SLP ++   + +
Sbjct: 672 LSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNL 731

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             L +  NKL+ L                        P  IG L+ L  L L  N++ S+
Sbjct: 732 QSLYLFNNKLSSL------------------------PAEIGQLTNLQSLYLFNNQLSSL 767

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P+ I    +L   Y+ NN LS+LPAE+G+L+ L +L L +NQL        QL  L  L 
Sbjct: 768 PAEIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPPGIGQLTNLQTLY 827

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLT-GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L NN L+ LP EIG++ +  K LL  GNPL++L   +    + A+L + + +L +  D+
Sbjct: 828 LDNNQLNSLPTEIGRLNSSLKNLLLDGNPLKSLPPEIQYQNSKAILNFYKQQLEQTIDN 886



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 65/148 (43%), Gaps = 19/148 (12%)

Query: 262 SNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS---SLV 318
           SN   EY        ++ LDLS N L+ LPP IG++T L+ L L  N L +L +    L 
Sbjct: 394 SNGYGEYIAPQSLEEVTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLT 453

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
           N  +  L     S LP              I   T L    + L L+   LS++P+EI +
Sbjct: 454 NLQSLYLFNNKLSSLPAE------------IGQLTNL----QTLYLDNNQLSSLPAEIGQ 497

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQ 406
              +  L L  N +  LP E+    +LQ
Sbjct: 498 LTNLQSLYLFNNKLSSLPAEIGQLTNLQ 525


>gi|421110782|ref|ZP_15571273.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803879|gb|EKS10006.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 473

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/271 (38%), Positives = 149/271 (54%), Gaps = 4/271 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQKL L+HN +  L +++  L  L  LN++ N+L+ L   IG L  L++LD+  N +  +
Sbjct: 190 LQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTL 249

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EIG+   L   D   NQL  LP  +G   NL       N + +LPE++ +   +  LD
Sbjct: 250 PEEIGNLQNLQTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLD 309

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +EGN+LT L    I     L +L    N L  +P+ IG L +L  L L  N++ ++P  I
Sbjct: 310 LEGNQLTTLPKE-IGKLQKLKKLYLYNNRLTTLPKEIGKLQKLQWLSLDHNQLKTLPKEI 368

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L    +G+N L+ LP E+GKL  L  LDLH NQL     E  +L+ L +LDL  N
Sbjct: 369 EDLQNLKILSLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTTLPKEIGKLQNLKMLDLHGN 428

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
            L  LP EIGK+  L++L L GNP  +LRS 
Sbjct: 429 QLMTLPKEIGKLQNLKELNLVGNP--SLRSQ 457



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/287 (37%), Positives = 149/287 (51%), Gaps = 3/287 (1%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           VY N  EA +       +DL       N +  L +++ NL  L  LN++ N+ + LP  I
Sbjct: 126 VYYNLTEALQHPTDVRVLDLGP-PEGGNQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEI 184

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G L  L+ LD+S N +  +P EIG    L K + +SNQL  L   +G   NL       N
Sbjct: 185 GNLQKLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRN 244

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +T+LPE++ +   +  LD+EGN+L  L    I +   L  L    N L  +PE IG+L 
Sbjct: 245 QLTTLPEEIGNLQNLQTLDLEGNQLAALPEE-IGNLQNLQTLDLEGNQLATLPEEIGNLQ 303

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  LDL  N++ ++P  I     L + Y+ NN L+ LP E+GKL KL  L L  NQLK 
Sbjct: 304 NLQTLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPKEIGKLQKLQWLSLDHNQLKT 363

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
              E   L+ L +L L +N L+ LP E+GK+  L  L L GN L TL
Sbjct: 364 LPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTTL 410



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 156/330 (47%), Gaps = 38/330 (11%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           N+L+ LP  IG L  L++L+++ N    +P+EIG+   L K D S NQL  LP  +G+  
Sbjct: 152 NQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQLQ 211

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           NL     ++N +T+L +++ +   +  LD+  N+LT L                      
Sbjct: 212 NLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTL---------------------- 249

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             PE IG+L  L  LDL  N++ ++P  I    +L    +  N L+ LP E+G L  L T
Sbjct: 250 --PEEIGNLQNLQTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQT 307

Query: 258 LDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           LDL  NQL     E     +L  L L NN L+ LP EIGK+  L+ L L  N L+TL   
Sbjct: 308 LDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPKEIGKLQKLQWLSLDHNQLKTL--- 364

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
                 P  ++ L++    +  S   TT    +     L +    L L G  L+ +P EI
Sbjct: 365 ------PKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLIM----LDLHGNQLTTLPKEI 414

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +   +  LDL  N +  LP E+    +L+
Sbjct: 415 GKLQNLKMLDLHGNQLMTLPKEIGKLQNLK 444



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 141/308 (45%), Gaps = 38/308 (12%)

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N +  +P EIG+   L   + +SNQ   LP  +G    L     S+N +T+LP+++    
Sbjct: 152 NQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQLQ 211

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            + KL++  N+LT LS   I +   L  L   +N L  +PE IG+L  L  LDL  N++ 
Sbjct: 212 NLQKLNLNSNQLTTLSKE-IGNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLA 270

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSV 279
           ++P  I    +L    +  N L+ LP E+G L  L TLDL  NQL     E     +L  
Sbjct: 271 ALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKLKK 330

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L NN L+ LP EIGK+  L+ L L  N L+TL   +                      
Sbjct: 331 LYLYNNRLTTLPKEIGKLQKLQWLSLDHNQLKTLPKEI---------------------- 368

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                 EDL  +        K LSL    L+ +P E+ +   +  LDL  N +  LP E+
Sbjct: 369 ------EDLQNL--------KILSLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTTLPKEI 414

Query: 400 SSCASLQV 407
               +L++
Sbjct: 415 GKLQNLKM 422



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 86/171 (50%), Gaps = 14/171 (8%)

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 296
           G N L+ LP E+G L  L TL+L+SNQ      E   L +L  LDLS+N L+ LP EIG+
Sbjct: 150 GGNQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQ 209

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L+KL L  N L TL   + N      L   R++L        +T  E++  +     
Sbjct: 210 LQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQL--------TTLPEEIGNLQNL-- 259

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
              + L LEG  L+A+P EI     +  LDL  N +  LP E+ +  +LQ 
Sbjct: 260 ---QTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQT 307


>gi|427735457|ref|YP_007055001.1| hypothetical protein Riv7116_1913 [Rivularia sp. PCC 7116]
 gi|427370498|gb|AFY54454.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 955

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/296 (35%), Positives = 163/296 (55%), Gaps = 3/296 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
             L++  +  N +  L  ++  L  L  LN+SHN+LS LPA IG+L  L+SLD+SFN + 
Sbjct: 76  AQLEEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLSFNQLS 135

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L   + S N+L  LP+ +G+   L      NN ++SLP ++   +K+  
Sbjct: 136 SLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQT 195

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N+L+ L    I   T L  L    N L+ +P  IG L+ L  L L  N++ S+P+
Sbjct: 196 LDLYNNQLSSLPAE-IGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHLSHNKLSSLPA 254

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            I    +L   ++ +N LS+LPAE+ +L+ L +LDL  N+L     E  QL +L  L+L 
Sbjct: 255 EIVQLTNLQFLHLSHNKLSSLPAEIVQLTNLQSLDLSHNKLSSLPAEIGQLTKLQFLNLK 314

Query: 284 NNSLSGLPPEIGKMTT-LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            N L+ LP EIG + + LR+L L  N L +    +++  T A+L + + +L +  D
Sbjct: 315 GNQLNSLPTEIGHLYSCLRELKLDSNLLESPPPEILSKGTKAILNFYKQQLEQTID 370



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 173/336 (51%), Gaps = 30/336 (8%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSL---DVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L++S N+L+ LP  IG+L  LK L      ++   +I   IG            N+L +L
Sbjct: 21  LDLSGNELTVLPPEIGKLTQLKRLILGKYRYDDKGRIVGTIG------------NKLSKL 68

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G    L +F    N ++SLP ++   +K+  L++  N+L+ L    I   T L  L
Sbjct: 69  PREIGLLAQLEEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAE-IGQLTKLQSL 127

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L+ +P  IG L++L  L+L  NR+ S+P+ I     L    + NN LS+LPAE+
Sbjct: 128 DLSFNQLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEI 187

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L+KL TLDL++NQL     E  QL +L  LDL NN LS LP EIG++T L+ L L+ N
Sbjct: 188 GQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHLSHN 247

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +V       L    ++L        S+   +++ +    S     L L    
Sbjct: 248 KLSSLPAEIVQLTNLQFLHLSHNKL--------SSLPAEIVQLTNLQS-----LDLSHNK 294

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
           LS++P+EI +  ++  L+L  N +  LP E+    S
Sbjct: 295 LSSLPAEIGQLTKLQFLNLKGNQLNSLPTEIGHLYS 330



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 3/129 (2%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LDLS N L+ LPPEIGK+T L++L+L G      +  +V      L K  R      +  
Sbjct: 21  LDLSGNELTVLPPEIGKLTQLKRLIL-GKYRYDDKGRIVGTIGNKLSKLPREIGLLAQLE 79

Query: 340 EASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
           E    +  L ++   +   +K   L+L    LS++P+EI +  ++  LDLS N +  LP 
Sbjct: 80  EFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLSFNQLSSLPA 139

Query: 398 ELSSCASLQ 406
           E+   A LQ
Sbjct: 140 EIGQLAKLQ 148


>gi|421099992|ref|ZP_15560634.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796973|gb|EKR99090.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 474

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/336 (34%), Positives = 167/336 (49%), Gaps = 37/336 (11%)

Query: 13  SLNLSNRSLRDVPNEV------------YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
            L+LSN  L+ +P ++            Y NF    +  +  +  +LQ L L +N ++ L
Sbjct: 98  KLDLSNNQLKTLPKDIEQLQKPLVLHLNYNNFTTLPK--EIGKLKELQGLELYNNQLKTL 155

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +D+  L  L VLN+++N+L  LP  IG+L  L+ L +  N +  +  EIG    L   D
Sbjct: 156 PKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLD 215

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL- 179
            ++NQL  LP  +G    L D   S+N +T+LP+D+     +  LD+ GN+LT L  ++ 
Sbjct: 216 LTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQLTTLPKDIG 275

Query: 180 ---------------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
                                I     L  L    N L  +P+ IG L  L  L LH N+
Sbjct: 276 YLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHSNQ 335

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           + ++P  I     L E Y+ NN L+ LP E+G+L  L  L LHSNQL     E  QL+ L
Sbjct: 336 LTTLPKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQLTTLPKEIGQLQNL 395

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            VL LS N L+ LP +IGK+  L+KL L+ N L TL
Sbjct: 396 PVLYLSYNQLTSLPKDIGKLQNLQKLDLSNNQLTTL 431



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/308 (35%), Positives = 157/308 (50%), Gaps = 12/308 (3%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNL+N  L+ +P ++ K  N      G+     +        +LQ L L +N +  L +D
Sbjct: 168 LNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTLPKD 227

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + +L  L  L++SHNKL+ LP  IG+L  L+ LD+S N +  +P +IG    L       
Sbjct: 228 IGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQLTTLPKDIGYLKELQVLHLED 287

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQ   LP  +G+  NL      NN +T LP+++     +  L +  N+LT L    I   
Sbjct: 288 NQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHSNQLTTLPKE-IGHL 346

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL  S N L  +P+ IG L  L  L LH N++ ++P  I    +L   Y+  N L+
Sbjct: 347 KGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQLTTLPKEIGQLQNLPVLYLSYNQLT 406

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
           +LP ++GKL  L  LDL +NQL     E  +L+ L  L LSNN L  LP EIGK+  LR 
Sbjct: 407 SLPKDIGKLQNLQKLDLSNNQLTTLPNEIGKLQNLQELYLSNNKLKTLPDEIGKLQKLRT 466

Query: 303 LLLTGNPL 310
           L L   PL
Sbjct: 467 LDLDDIPL 474



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 184/362 (50%), Gaps = 15/362 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L++N ++ L +D+  L    VL++++N  + LP  IG+L  L+ L++  N +  
Sbjct: 95  ELQKLDLSNNQLKTLPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKT 154

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P +I     L   + ++NQLK LP  +G+  NL   +  NN +T L +++     +  L
Sbjct: 155 LPKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVL 214

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L  + I     L +L  S N L  +P+ IG L  L  LDL  N++ ++P  
Sbjct: 215 DLTNNQLTTLPKD-IGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQLTTLPKD 273

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I     L   ++ +N  + LP E+G+L  L  L L++NQL     E  +L+ L VL L +
Sbjct: 274 IGYLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHS 333

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EIG +  L++L L+ N L TL   +       +L YL S           TT
Sbjct: 334 NQLTTLPKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVL-YLHSN--------QLTT 384

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I     L V    L L    L+++P +I +   + KLDLS N +  LP E+    +
Sbjct: 385 LPKEIGQLQNLPV----LYLSYNQLTSLPKDIGKLQNLQKLDLSNNQLTTLPNEIGKLQN 440

Query: 405 LQ 406
           LQ
Sbjct: 441 LQ 442



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 175/370 (47%), Gaps = 53/370 (14%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++  N+L+ LP  IG+L  L+ LD+  N I  +P EIG    L K 
Sbjct: 40  LTEALQNPTDVLILDLIGNQLTTLPKDIGKLQKLQKLDLRGNRIATLPKEIGYLKELQKL 99

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D S+NQLK LP  + +         + N  T+LP+++    ++  L++  N+L  L    
Sbjct: 100 DLSNNQLKTLPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTL---- 155

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
                               P+ I  L  L  L+L  N++ ++P  I    +L    +GN
Sbjct: 156 --------------------PKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGN 195

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L+ L  E+GKL  L  LDL +NQL     +   L+ L  LDLS+N L+ LP +IGK+ 
Sbjct: 196 NKLTILSKEIGKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQ 255

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKED---------L 348
            L+ L L+GN L TL         P  + YL+  ++   ED++ +T  ++         L
Sbjct: 256 NLQVLDLSGNQLTTL---------PKDIGYLKELQVLHLEDNQFTTLPKEIGQLQNLRVL 306

Query: 349 ITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                +L++  KE         L L    L+ +P EI     + +L LS N +  LP E+
Sbjct: 307 YLYNNQLTILPKEIGKLQNLQVLYLHSNQLTTLPKEIGHLKGLQELYLSNNQLTTLPKEI 366

Query: 400 SSCASLQVKF 409
               +LQV +
Sbjct: 367 GELQNLQVLY 376



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 11/222 (4%)

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
           + + E + + + ++ LDL  N++ ++P  I     L +  +  N ++ LP E+G L +L 
Sbjct: 38  HNLTEALQNPTDVLILDLIGNQLTTLPKDIGKLQKLQKLDLRGNRIATLPKEIGYLKELQ 97

Query: 257 TLDLHSNQLKEYCVEACQLRLS-VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            LDL +NQLK    +  QL+   VL L+ N+ + LP EIGK+  L+ L L  N L+TL  
Sbjct: 98  KLDLSNNQLKTLPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTLPK 157

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA-TRLSVTSKE---------LSLE 365
            +       +L    ++L              ++ +   +L++ SKE         L L 
Sbjct: 158 DIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLT 217

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
              L+ +P +I    E+  LDLS N +  LP ++    +LQV
Sbjct: 218 NNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQNLQV 259


>gi|418701699|ref|ZP_13262621.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759263|gb|EKR25478.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 498

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 198/364 (54%), Gaps = 19/364 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N++  L +++  L  L  LN++  KL+ LP  IG+L  L+ LD+SFNS+  
Sbjct: 95  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTT 154

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+G    L + D   N+L  LP  +G+  NL +   ++N +T+LP+++     + +L
Sbjct: 155 LPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 214

Query: 166 DVEGNKLTVLSNNLIASWTMLT-ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           D+  N+LT L   +     + T  LI ++  L  +P+ IG L  L  L+L  N++ ++P 
Sbjct: 215 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQ--LTTLPKEIGELQNLKTLNLLDNQLTTLPK 272

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    +  N ++ALP E+G+L  L  LDLH NQL     E  QL+ L  LDL 
Sbjct: 273 EIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLH 332

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS 342
            N L+ LP EIG++  L++L L  N L TL         P  ++ L++ R+ + ++++ +
Sbjct: 333 QNQLTTLPKEIGQLQNLQELCLDENQLTTL---------PKEIEQLQNLRVLDLDNNQLT 383

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           T  ++++ + + L V    L+L    LS +P EI +   +  L L  N +  LP E+   
Sbjct: 384 TLPKEVLRLQS-LQV----LALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQL 438

Query: 403 ASLQ 406
            +LQ
Sbjct: 439 QNLQ 442



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/339 (33%), Positives = 173/339 (51%), Gaps = 15/339 (4%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++S N L+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + + +S +L  L
Sbjct: 73  LQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTL 132

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G+  NL +   S N +T+LP+++     + +LD+  N+L  L    I     L EL
Sbjct: 133 PKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPME-IGQLKNLQEL 191

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N L  +P+ I  L  L  LDLH+N++ ++P  I    +L    +    L+ LP E+
Sbjct: 192 DLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEI 251

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L TL+L  NQL     E  +L+ L +L L  N ++ LP EIG++  L+ L L  N
Sbjct: 252 GELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQN 311

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L TL   +  G    L      RL  +++   +  KE  I     L    +EL L+   
Sbjct: 312 QLTTLPKEI--GQLQNL-----QRLDLHQNQLTTLPKE--IGQLQNL----QELCLDENQ 358

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           L+ +P EI +   +  LDL  N +  LP E+    SLQV
Sbjct: 359 LTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQV 397



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 161/345 (46%), Gaps = 56/345 (16%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++ + KL+ LP  IG+L  L+ LD+SFNS+  +P EIG    L + D S N L  LP 
Sbjct: 52  TLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     ++  +T+LP+++     + +LD+  N LT L                
Sbjct: 112 EVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ +G L  L RLDLHQNR+ ++P  I    +L E  + +N L+ LP E+ +
Sbjct: 156 --------PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDLH NQL     E  QL+ L  L+L    L+ LP EIG++  L+ L L  N L
Sbjct: 208 LRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQL 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE--------- 361
            TL   +  G    L                    E L+    R++   KE         
Sbjct: 268 TTLPKEI--GELQNL--------------------EILVLRENRITALPKEIGQLQNLQW 305

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L L    L+ +P EI +   + +LDL +N +  LP E+    +LQ
Sbjct: 306 LDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQ 350



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 38/329 (11%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R    L+LS  SL  +P EV              +  +LQ+L L  N +  L  ++  L 
Sbjct: 140 RNLQELDLSFNSLTTLPKEV-------------GQLENLQRLDLHQNRLATLPMEIGQLK 186

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+++ NKL+ LP  I +L  L+ LD+  N +  +P EIG    L   +    QL  
Sbjct: 187 NLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTT 246

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP  +G   NL      +N +T+LP+++ +   +  L +  N++T L    I     L  
Sbjct: 247 LPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKE-IGQLQNLQW 305

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L   +N L  +P+ IG L  L RLDLHQN++ ++P  I    +L E  +  N L+ LP E
Sbjct: 306 LDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKE 365

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR------------------------LSVLDLSN 284
           + +L  L  LDL +NQL     E  +L+                        L VL L +
Sbjct: 366 IEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLIS 425

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N L+ LP EIG++  L++L L  N L T 
Sbjct: 426 NQLTTLPKEIGQLQNLQELCLDENQLTTF 454



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 137/266 (51%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L  LN+   +L+ LP  IGEL  LK+L++  N +  
Sbjct: 210 NLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTT 269

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N++  LP  +G+  NL       N +T+LP+++     + +L
Sbjct: 270 LPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRL 329

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L    I     L EL   +N L  +P+ I  L  L  LDL  N++ ++P  
Sbjct: 330 DLHQNQLTTLPKE-IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKE 388

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +    SL    +G+N LS LP E+G+L  L  L L SNQL     E  QL+ L  L L  
Sbjct: 389 VLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDE 448

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+  P EI ++  L++L L  NPL
Sbjct: 449 NQLTTFPKEIRQLKNLQELHLYLNPL 474



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L VL++ +N+L+ LP  +  L  L+ L +  N +  
Sbjct: 348 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 407

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP  +G+  NL +     N +T+ P+++     + +L
Sbjct: 408 LPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQEL 467

Query: 166 DVEGNKLT 173
            +  N L+
Sbjct: 468 HLYLNPLS 475



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L VL +  N+LS LP  IG+L  L+ L +  N +  
Sbjct: 371 NLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTT 430

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 431 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 476


>gi|255080388|ref|XP_002503774.1| predicted protein [Micromonas sp. RCC299]
 gi|226519041|gb|ACO65032.1| predicted protein [Micromonas sp. RCC299]
          Length = 683

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 196/403 (48%), Gaps = 48/403 (11%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNL+   L  VP EV +  + D    G     +V         L++L L  N +  +  +
Sbjct: 258 LNLNGNQLTSVPAEVVQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTSVPAE 317

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L   +++L+ +PA IG+L  L+  D+  N +  +P EIG  TAL +     
Sbjct: 318 IAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDG 377

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP+ +G+  +L       N +TSLP D+   + + +L ++GN+LT +    I   
Sbjct: 378 NRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAE-IGQL 436

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
           T L +L  S N L  +P  IG L+ L  L L+ N++ S+P+ I+   SL E    N+ L+
Sbjct: 437 TSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLT 496

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
           ++PAE+G+L+ L   DL  N+L     E  QL  L  L L  N L+ LP EIG++ +L+K
Sbjct: 497 SVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKK 556

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           LLL  N L +L         PA +  L S                             EL
Sbjct: 557 LLLGCNQLTSL---------PADIGQLTSLW---------------------------EL 580

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            L+G  L+++P+EI +   + KLDLS N +  +P E+    SL
Sbjct: 581 RLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSL 623



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 208/430 (48%), Gaps = 48/430 (11%)

Query: 19  RSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK------EDLRNLPLLTV 72
           R+ R +  E+ + + E  +  ++WE V ++   +    +E          ++  L  +  
Sbjct: 153 RTWRTMSPELQETWPE-DQQPEYWEGVTMENSRVVKLELEDFDLTGAVPAEIGQLTSMVK 211

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+L+ LPA IG+L  L+ L +  N +  +P EIG  T+L + + + NQL  +P+ 
Sbjct: 212 LSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPAEIGQLTSLTELNLNGNQLTSVPAE 271

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------------- 179
           + +  +L   +   N +TS+P D+   + + +L + GN+LT +   +             
Sbjct: 272 VVQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTSVPAEIAQLTSLRELGFYN 331

Query: 180 ---------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
                    I   T L +    KN L  +P  IG L+ L  L L  NR+ S+P+ I    
Sbjct: 332 SQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLA 391

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           SL +  +G N L++LPA++G+L+ L  L L  N+L     E  QL  L  LDLS+N L+ 
Sbjct: 392 SLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTS 451

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---PENEDSEASTTKE 346
           +P EIG++T+L +L L GN L ++ + +    +   L +  S+L   P       S  K 
Sbjct: 452 VPTEIGQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKW 511

Query: 347 DL-----------ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           DL           I   T L    +EL L+G  L+++P+EI +   + KL L  N +  L
Sbjct: 512 DLGKNELASVPAEIGQLTAL----RELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSL 567

Query: 396 PPELSSCASL 405
           P ++    SL
Sbjct: 568 PADIGQLTSL 577



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 158/286 (55%), Gaps = 11/286 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL+L  N +  L  D+  L  L  L +  N+L+ +PA IG+L  L+ LD+S N +  +
Sbjct: 393 LKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSV 452

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+L +   + NQL  +P+ + +  +L +    N+ +TS+P ++   + + K D
Sbjct: 453 PTEIGQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWD 512

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L  +    I   T L EL    N L  +P  IG L+ L +L L  N++ S+P+ I
Sbjct: 513 LGKNELASVPAE-IGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADI 571

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               SL E  +  N L+++PAE+G+L+ L  LDL  NQL     E  QL  L+ L L+ N
Sbjct: 572 GQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGN 631

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            L+ +P EI +++ L +L L+GN L+++         PA ++ LR+
Sbjct: 632 QLTSVPTEIAQLSLLEQLWLSGNRLKSV---------PAAIRELRA 668



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 185/384 (48%), Gaps = 51/384 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L   N  L  VP E+              +   L+K  L  N +  +  ++  L  L  L
Sbjct: 327 LGFYNSQLTSVPAEIG-------------QLTSLEKWDLGKNELASVPAEIGQLTALREL 373

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L+ LPA IG+L  LK L +  N +  +P +IG  T+L +     N+L  +P+ +
Sbjct: 374 RLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEI 433

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L     S+N +TS+P ++   + +++L + GN+LT +    IA  T L EL    
Sbjct: 434 GQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPAE-IAQLTSLRELGFYN 492

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           + L  +P  IG L+ L + DL +N + S+P+ I    +L E  +  N L++LPAE+G+L+
Sbjct: 493 SQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLA 552

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     +  QL  L  L L  N L+ +P EIG++T+L KL L+ N L +
Sbjct: 553 SLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTS 612

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +       PT                          I   T L+    EL L G  L+++
Sbjct: 613 V-------PTE-------------------------IGQLTSLT----ELYLNGNQLTSV 636

Query: 373 PSEIWEAGEITKLDLSRNSIQELP 396
           P+EI +   + +L LS N ++ +P
Sbjct: 637 PTEIAQLSLLEQLWLSGNRLKSVP 660



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 15/248 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS+  L  VP E+              +   L +L L  N +  +  ++  L  L  L
Sbjct: 442 LDLSDNQLTSVPTEIG-------------QLTSLTELYLNGNQLTSVPAEIAQLTSLREL 488

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
              +++L+ +PA IG+L  L+  D+  N +  +P EIG  TAL +     N+L  LP+ +
Sbjct: 489 GFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEI 548

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L       N +TSLP D+   + + +L ++GN+LT +    I   T L +L  S 
Sbjct: 549 GQLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAE-IGQLTSLEKLDLSD 607

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L  L L+ N++ S+P+ I+    L + ++  N L ++PA + +L 
Sbjct: 608 NQLTSVPTEIGQLTSLTELYLNGNQLTSVPTEIAQLSLLEQLWLSGNRLKSVPAAIRELR 667

Query: 254 KLG-TLDL 260
             G T+DL
Sbjct: 668 AAGCTVDL 675


>gi|418712123|ref|ZP_13272868.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791390|gb|EKR85066.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 475

 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 198/364 (54%), Gaps = 19/364 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N++  L +++  L  L  LN++  KL+ LP  IG+L  L+ LD+SFNS+  
Sbjct: 72  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTT 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+G    L + D   N+L  LP  +G+  NL +   ++N +T+LP+++     + +L
Sbjct: 132 LPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLT-ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           D+  N+LT L   +     + T  LI ++  L  +P+ IG L  L  L+L  N++ ++P 
Sbjct: 192 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQ--LTTLPKEIGELQNLKTLNLLDNQLTTLPK 249

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    +  N ++ALP E+G+L  L  LDLH NQL     E  QL+ L  LDL 
Sbjct: 250 EIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLH 309

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS 342
            N L+ LP EIG++  L++L L  N L TL         P  ++ L++ R+ + ++++ +
Sbjct: 310 QNQLTTLPKEIGQLQNLQELCLDENQLTTL---------PKEIEQLQNLRVLDLDNNQLT 360

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           T  ++++ + + L V    L+L    LS +P EI +   +  L L  N +  LP E+   
Sbjct: 361 TLPKEVLRLQS-LQV----LALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQL 415

Query: 403 ASLQ 406
            +LQ
Sbjct: 416 QNLQ 419



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 172/337 (51%), Gaps = 15/337 (4%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++ + KL+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + + +S +L  LP 
Sbjct: 52  TLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL +   S N +T+LP+++     + +LD+  N+L  L    I     L EL  
Sbjct: 112 EIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPME-IGQLKNLQELDL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N L  +P+ I  L  L  LDLH+N++ ++P  I    +L    +    L+ LP E+G+
Sbjct: 171 NSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGE 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL+L  NQL     E  +L+ L +L L  N ++ LP EIG++  L+ L L  N L
Sbjct: 231 LQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQL 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL   +  G    L      RL  +++   +  KE  I     L    +EL L+   L+
Sbjct: 291 TTLPKEI--GQLQNL-----QRLDLHQNQLTTLPKE--IGQLQNL----QELCLDENQLT 337

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +P EI +   +  LDL  N +  LP E+    SLQV
Sbjct: 338 TLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQV 374



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 38/329 (11%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R    L+LS  SL  +P EV              +  +LQ+L L  N +  L  ++  L 
Sbjct: 117 RNLQELDLSFNSLTTLPKEV-------------GQLENLQRLDLHQNRLATLPMEIGQLK 163

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+++ NKL+ LP  I +L  L+ LD+  N +  +P EIG    L   +    QL  
Sbjct: 164 NLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTT 223

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP  +G   NL      +N +T+LP+++ +   +  L +  N++T L    I     L  
Sbjct: 224 LPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKE-IGQLQNLQW 282

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L   +N L  +P+ IG L  L RLDLHQN++ ++P  I    +L E  +  N L+ LP E
Sbjct: 283 LDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKE 342

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR------------------------LSVLDLSN 284
           + +L  L  LDL +NQL     E  +L+                        L VL L +
Sbjct: 343 IEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLIS 402

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N L+ LP EIG++  L++L L  N L T 
Sbjct: 403 NQLTTLPKEIGQLQNLQELCLDENQLTTF 431



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 137/266 (51%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L  LN+   +L+ LP  IGEL  LK+L++  N +  
Sbjct: 187 NLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTT 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N++  LP  +G+  NL       N +T+LP+++     + +L
Sbjct: 247 LPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRL 306

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L    I     L EL   +N L  +P+ I  L  L  LDL  N++ ++P  
Sbjct: 307 DLHQNQLTTLPKE-IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKE 365

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +    SL    +G+N LS LP E+G+L  L  L L SNQL     E  QL+ L  L L  
Sbjct: 366 VLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDE 425

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+  P EI ++  L++L L  NPL
Sbjct: 426 NQLTTFPKEIRQLKNLQELHLYLNPL 451



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 1/223 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L+ L L  N +  L +++  L  L +L +  N+++ LP  IG+L  L+ LD+  N 
Sbjct: 230 ELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQ 289

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG    L + D   NQL  LP  +G+  NL +     N +T+LP+++     +
Sbjct: 290 LTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 349

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD++ N+LT L   ++   + L  L    N L+ +P+ IG L  L  L L  N++ ++
Sbjct: 350 RVLDLDNNQLTTLPKEVLRLQS-LQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTL 408

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           P  I    +L E  +  N L+  P E+ +L  L  L L+ N L
Sbjct: 409 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 451



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L VL++ +N+L+ LP  +  L  L+ L +  N +  
Sbjct: 325 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 384

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP  +G+  NL +     N +T+ P+++     + +L
Sbjct: 385 LPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQEL 444

Query: 166 DVEGNKLT 173
            +  N L+
Sbjct: 445 HLYLNPLS 452



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L VL +  N+LS LP  IG+L  L+ L +  N +  
Sbjct: 348 NLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTT 407

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 408 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 453


>gi|157135396|ref|XP_001656638.1| mitotic protein phosphatase 1 regulator, putative [Aedes aegypti]
 gi|108881267|gb|EAT45492.1| AAEL003228-PA [Aedes aegypti]
          Length = 608

 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 213/424 (50%), Gaps = 32/424 (7%)

Query: 5   LKAARTSGSLNLSNRSLRDVP-------------NEVYKNFDEAGEGDKWWEAVDLQKLI 51
           +K A  SG LNLS + L  VP              EV  + D + E + WW    L  L 
Sbjct: 36  IKQALKSGVLNLSGQGLATVPEKVWNLSDSEDCDKEVRYDLDRSNEEESWWNQKTLTNLD 95

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N +  + E+++NL  LTVLN+  N L+ LP  IG L  L  +++S N + ++P+   
Sbjct: 96  LSSNALTCISENVKNLGDLTVLNLQDNALTSLPDGIGCLTKLTKINISRNKLTELPESFF 155

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L   + + N   E+ S++   + L     S N + SLP  +    ++ +L +  N+
Sbjct: 156 ELKELKVLNLAHNDFSEIHSNVSDLIMLEVLDISFNSLNSLPGGIGFLVRLQQLTLNNNR 215

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L  L N+ I +   L ++  +KN L  +P  +G L +L  L +  N ++ +P   +GC +
Sbjct: 216 LIELPND-IVNLRNLHKMDLAKNDLKQLPPVMGELRKLECLYVQHNDVVELP-DFTGCDA 273

Query: 232 LAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           L E ++ NN + ++PA+  + L +L  LDL  N++++   E   L  L+ LDLSNNS+S 
Sbjct: 274 LKEIHISNNFIKSIPADFCENLPQLKVLDLRDNKIEKLPDEISMLASLTRLDLSNNSISS 333

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR------LPENEDSE-AS 342
           LP  +  +  L  L + GNP+R++R  ++   T  +LK LR R       PEN  +    
Sbjct: 334 LPSCLSTLAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTLRERDGPGKGGPENVKAPFEE 393

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGE--ITKLDLSRNSIQELPPEL 399
           +T  D+  M        + + +   NL  +P +++ +A E  +  +D+S+N + E+P  +
Sbjct: 394 STFPDVYQMK-----KGRSMIVSNKNLIDVPEQVFLDAAEASVYNVDISKNKLGEVPSGI 448

Query: 400 SSCA 403
           +  A
Sbjct: 449 THLA 452



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 155/344 (45%), Gaps = 36/344 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           +++SN  ++ +P +  +N  +            L+ L L  N IEKL +++  L  LT L
Sbjct: 277 IHISNNFIKSIPADFCENLPQ------------LKVLDLRDNKIEKLPDEISMLASLTRL 324

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI---GSATALVKFDCSSNQLKELP 130
           ++S+N +S LP+ +  L  L SL V  N I  I  +I   G+   L          K  P
Sbjct: 325 DLSNNSISSLPSCLSTLAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTLRERDGPGKGGP 384

Query: 131 SSLGRCLNLSDFK------------ASNNCITSLPE----DLADCSKMSKLDVEGNKLTV 174
            ++      S F              SN  +  +PE    D A+ S +  +D+  NKL  
Sbjct: 385 ENVKAPFEESTFPDVYQMKKGRSMIVSNKNLIDVPEQVFLDAAEAS-VYNVDISKNKLGE 443

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           + + +      LTEL  S NLL  +P       R+  L++  N +  +P  +    +L E
Sbjct: 444 VPSGITHLADQLTELNISFNLLKTIPMFFSRFERISYLNISNNLLADLPEVVGLLVTLRE 503

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGL 290
             + NN L  +P  + +L  L  L    N+++E       L    RL+ LDL+NN++  +
Sbjct: 504 LNVANNQLKRIPPSVYELKGLEILLARDNKIEEIDATESGLAALPRLATLDLANNNIKQV 563

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           PP +G +  +  L L GN  R  R  ++   T +++ YLR R+P
Sbjct: 564 PPVLGLLKNITTLELIGNGFRQPRHQILEKGTESIMAYLRDRIP 607



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 177/397 (44%), Gaps = 75/397 (18%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V LQ+L L +N + +L  D+ NL  L  ++++ N L +LP  +GEL  L+ L V  N ++
Sbjct: 204 VRLQQLTLNNNRLIELPNDIVNLRNLHKMDLAKNDLKQLPPVMGELRKLECLYVQHNDVV 263

Query: 105 KIPD--------EIGSATALVK---------------FDCSSNQLKELPSSLGRCLNLSD 141
           ++PD        EI  +   +K                D   N++++LP  +    +L+ 
Sbjct: 264 ELPDFTGCDALKEIHISNNFIKSIPADFCENLPQLKVLDLRDNKIEKLPDEISMLASLTR 323

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT--MLTELIASKNLLNGM 199
              SNN I+SLP  L+  + +  L VEGN +  +  ++I   T  +L  L        G 
Sbjct: 324 LDLSNNSISSLPSCLSTLAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTLRERDGPGKGG 383

Query: 200 PETIGS-LSRLIRLDLHQNR-----------ILSIPSSISGCCSLAEFY---MGNNALSA 244
           PE + +        D++Q +           ++ +P  +    + A  Y   +  N L  
Sbjct: 384 PENVKAPFEESTFPDVYQMKKGRSMIVSNKNLIDVPEQVFLDAAEASVYNVDISKNKLGE 443

Query: 245 LPAELGKLS-KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           +P+ +  L+ +L  L++  N LK   +   +  R+S L++SNN L+ LP  +G + TLR+
Sbjct: 444 VPSGITHLADQLTELNISFNLLKTIPMFFSRFERISYLNISNNLLADLPEVVGLLVTLRE 503

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L +  N L+ +  S+       +L    +++ E + +E+                     
Sbjct: 504 LNVANNQLKRIPPSVYELKGLEILLARDNKIEEIDATESG-------------------- 543

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                 L+A+P        +  LDL+ N+I+++PP L
Sbjct: 544 ------LAALP-------RLATLDLANNNIKQVPPVL 567


>gi|350422758|ref|XP_003493273.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
           impatiens]
          Length = 610

 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 206/407 (50%), Gaps = 33/407 (8%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK+ R    L+L +  L ++P+ VYK               +L  L L  N +  + +++
Sbjct: 197 LKSLRV---LDLRHNKLSEIPDVVYK-------------LTNLTTLFLRFNRVRYVSDNI 240

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           RNL  LT+L++  NK+ ELPA IG+L  L + D+S N +  +P+EIG+   L   D   N
Sbjct: 241 RNLTNLTMLSLRENKIRELPAGIGKLVNLITFDISHNHLEHLPEEIGNCVQLSTLDLQHN 300

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L ++P ++GR ++L+      N +TS+P+ LA+C  M +  VEGN+++ L + L+AS +
Sbjct: 301 ELLDIPDTIGRLVSLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLS 360

Query: 185 MLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNAL 242
            LT +  S+N     P       + +  ++L  N+I  IP +I S   +LA+  M  N L
Sbjct: 361 DLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYAIFSRAKNLAKLNMKENQL 420

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           +ALP ++G    +  L+L +NQL +   +  C   L VL LSNN L  +P  I  +  LR
Sbjct: 421 TALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLR 480

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N + +L         P  + +LR        S   T+    I   T L+     
Sbjct: 481 VLDLEENKIESL---------PNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTY---- 527

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQV 407
           LS+   NL+ +P EI     +  L ++ N+ +  LP EL+ C +L +
Sbjct: 528 LSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSI 574



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 158/375 (42%), Gaps = 88/375 (23%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L    +R++P         AG G    + V+L    ++HN++E L E++ N   L+ L
Sbjct: 249 LSLRENKIRELP---------AGIG----KLVNLITFDISHNHLEHLPEEIGNCVQLSTL 295

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ HN+L ++P  IG L  L  L + +N +  IP  + +   + +F    NQ+ +LP  L
Sbjct: 296 DLQHNELLDIPDTIGRLVSLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGL 355

Query: 134 -------------------------------------------------GRCLNLSDFKA 144
                                                             R  NL+    
Sbjct: 356 LASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYAIFSRAKNLAKLNM 415

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLT---------------VLSNNL-------IAS 182
             N +T+LP D+     M +L++  N+LT               +LSNNL       IA+
Sbjct: 416 KENQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIAN 475

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L   +N +  +P  IG L  L +L L  N++ S+P +I    +L    +G N L
Sbjct: 476 LRKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNL 535

Query: 243 SALPAELGKLSKLGTLDLHSN-QLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEI--GKMT 298
           + LP E+G L  L +L ++ N  L     E A    LS++ + N  LS +PPEI  G  +
Sbjct: 536 NYLPEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPLSHIPPEIVAGGPS 595

Query: 299 TLRKLLLTGNPLRTL 313
            + + L    P R++
Sbjct: 596 LVIQFLKMQGPYRSM 610


>gi|255070745|ref|XP_002507454.1| predicted protein [Micromonas sp. RCC299]
 gi|226522729|gb|ACO68712.1| predicted protein [Micromonas sp. RCC299]
          Length = 642

 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 184/364 (50%), Gaps = 25/364 (6%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L VL++ +  L+ +PA IG+L  L  L +  N +  +P EIG  T+L      
Sbjct: 23  EVGRLSALKVLDLRNYHLTSVPAEIGQLTSLGVLHLDNNQLTSVPAEIGQLTSLTHLYLG 82

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  +P+ +G+  +L+  +  +N +TS+P ++   + + KL +EGN+LT +    I  
Sbjct: 83  CNQLTSVPAWIGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAE-IGQ 141

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              LTEL    N L  +P  IG L+ L  L L  N++ S+P+ I    SL E  +  N L
Sbjct: 142 LVALTELTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYGNQL 201

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +++PAE+G+L+ L  L L  N+L     E  QLR L +L L+ N L+ +P EIG++ +L 
Sbjct: 202 TSVPAEIGQLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLASLE 261

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            LLL  N L ++         PA +  L S      D    T+    I   T L      
Sbjct: 262 NLLLGHNQLTSV---------PAEIGQLTSLRKLYLDHNKLTSVPVEIGQLTSLV----R 308

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCIS 421
           L LEG  L+++P+EIW+   +  L+L  N +  +P E+   A+L          KE C+ 
Sbjct: 309 LELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSVPAEIGQLAAL----------KELCLY 358

Query: 422 GCYL 425
           G  L
Sbjct: 359 GNQL 362



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 195/381 (51%), Gaps = 21/381 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L + ++  +  ++  L  L VL++ +N+L+ +PA IG+L  L  L +  N +  +
Sbjct: 30  LKVLDLRNYHLTSVPAEIGQLTSLGVLHLDNNQLTSVPAEIGQLTSLTHLYLGCNQLTSV 89

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG  T+L   +  SN+L  +P+ +G+  +L       N +TS+P ++     +++L 
Sbjct: 90  PAWIGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAEIGQLVALTELT 149

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+LT +    I   T LT+L    N L  +P  IG L+ L  L L+ N++ S+P+ I
Sbjct: 150 LYGNQLTSVPAE-IGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYGNQLTSVPAEI 208

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               +L    + +N L+++PAE+G+L  L  L L+ NQL     E  QL  L  L L +N
Sbjct: 209 GQLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLASLENLLLGHN 268

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLR------SSLVN--------GPTPALLKYLRS 331
            L+ +P EIG++T+LRKL L  N L ++       +SLV            PA +  L S
Sbjct: 269 QLTSVPAEIGQLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQLTSVPAEIWQLTS 328

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
               N      T+    I     L    KEL L G  L+++P+E+     + KL LSRN 
Sbjct: 329 LKWLNLGYNQLTSVPAEIGQLAAL----KELCLYGNQLTSVPAEVGRLSALRKLSLSRNR 384

Query: 392 IQELPPELSSCASL-QVKFSD 411
           +  LP E+    SL +++ SD
Sbjct: 385 LTSLPAEIGQLTSLRELRLSD 405



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 202/431 (46%), Gaps = 46/431 (10%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKW-WEAVDLQKLILAHNNIEKLKED 63
           L L    L  VP E+         Y   ++      W  +   L++L L  N +  +  +
Sbjct: 148 LTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYGNQLTSVPAE 207

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L++  NKL+ +PA IG+L  LK L ++ N +  +P EIG   +L       
Sbjct: 208 IGQLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLASLENLLLGH 267

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL---- 179
           NQL  +P+ +G+  +L      +N +TS+P ++   + + +L++EGN+LT +   +    
Sbjct: 268 NQLTSVPAEIGQLTSLRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQLTSVPAEIWQLT 327

Query: 180 ------------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
                             I     L EL    N L  +P  +G LS L +L L +NR+ S
Sbjct: 328 SLKWLNLGYNQLTSVPAEIGQLAALKELCLYGNQLTSVPAEVGRLSALRKLSLSRNRLTS 387

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 280
           +P+ I    SL E  + +N L+++PAE+G+L  L  L L  NQL     E  QL  L  L
Sbjct: 388 LPAEIGQLTSLRELRLSDNQLTSVPAEIGQLRALKLLILLGNQLTSVPAEIGQLASLVGL 447

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
            L +N L+G+P EIG++T+L  L L  N L +L         PA +  L S +       
Sbjct: 448 HLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSL---------PAEIGQLTSLVESLLGGN 498

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
             T+    I   T L+     L L    L+++P+E+     + +L++SRN++  LP E+ 
Sbjct: 499 QLTSVPAEIGQLTSLT----HLDLVDNQLTSVPAEVGRLTALRELNVSRNALTLLPAEIG 554

Query: 401 SCASLQVKFSD 411
              SL+  + D
Sbjct: 555 RLTSLKGLYLD 565



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 152/268 (56%), Gaps = 2/268 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N +  +  ++  L  L  LN+ +N+L+ +PA IG+L  LK L +  N +  +
Sbjct: 306 LVRLELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSVPAEIGQLAALKELCLYGNQLTSV 365

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  +AL K   S N+L  LP+ +G+  +L + + S+N +TS+P ++     +  L 
Sbjct: 366 PAEVGRLSALRKLSLSRNRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIGQLRALKLLI 425

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+LT +    I     L  L    N L G+P  IG L+ L  L L +N++ S+P+ I
Sbjct: 426 LLGNQLTSVPAE-IGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEI 484

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL E  +G N L+++PAE+G+L+ L  LDL  NQL     E  +L  L  L++S N
Sbjct: 485 GQLTSLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRN 544

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +L+ LP EIG++T+L+ L L  N L ++
Sbjct: 545 ALTLLPAEIGRLTSLKGLYLDENELTSV 572



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 173/355 (48%), Gaps = 38/355 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L HN +  +  ++  L  L  L +  N+L+ +PA I +L  LK L++ +N +  +
Sbjct: 283 LRKLYLDHNKLTSVPVEIGQLTSLVRLELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSV 342

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG   AL +     NQL  +P+ +GR   L     S N +TSLP ++   + + +L 
Sbjct: 343 PAEIGQLAALKELCLYGNQLTSVPAEVGRLSALRKLSLSRNRLTSLPAEIGQLTSLRELR 402

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT +    I     L  LI   N L  +P  IG L+ L+ L L  NR+  +P+ I
Sbjct: 403 LSDNQLTSVPAE-IGQLRALKLLILLGNQLTSVPAEIGQLASLVGLHLRDNRLTGVPAEI 461

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL   Y+  N L++LPAE+G+L+ L    L  NQL     E  QL  L+ LDL +N
Sbjct: 462 GQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDN 521

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ +P E+G++T LR+L ++ N L  L         PA +  L S              
Sbjct: 522 QLTSVPAEVGRLTALRELNVSRNALTLL---------PAEIGRLTSL------------- 559

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                         K L L+   L+++P+EI +   + +L L+ N +  LP E+ 
Sbjct: 560 --------------KGLYLDENELTSVPAEIGQLTSLQELWLNDNQLTSLPAEIG 600



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 154/305 (50%), Gaps = 15/305 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L  VP E+              +   L++L L  N +  +  ++  L  L  L
Sbjct: 332 LNLGYNQLTSVPAEIG-------------QLAALKELCLYGNQLTSVPAEVGRLSALRKL 378

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N+L+ LPA IG+L  L+ L +S N +  +P EIG   AL       NQL  +P+ +
Sbjct: 379 SLSRNRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIGQLRALKLLILLGNQLTSVPAEI 438

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L      +N +T +P ++   + +  L +  N+LT L    I   T L E +   
Sbjct: 439 GQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAE-IGQLTSLVESLLGG 497

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L  LDL  N++ S+P+ +    +L E  +  NAL+ LPAE+G+L+
Sbjct: 498 NQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRNALTLLPAEIGRLT 557

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  N+L     E  QL  L  L L++N L+ LP EIG +  L  L L GN L +
Sbjct: 558 SLKGLYLDENELTSVPAEIGQLTSLQELWLNDNQLTSLPAEIGLLIWLHILRLGGNQLTS 617

Query: 313 LRSSL 317
           + +++
Sbjct: 618 MPAAI 622



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 109/202 (53%), Gaps = 1/202 (0%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N +  +  ++  L  L  L++  N+L+ +PA IG+L  L+ L ++ N +  +P EIG  T
Sbjct: 429 NQLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLT 488

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +LV+     NQL  +P+ +G+  +L+     +N +TS+P ++   + + +L+V  N LT+
Sbjct: 489 SLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRNALTL 548

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I   T L  L   +N L  +P  IG L+ L  L L+ N++ S+P+ I     L  
Sbjct: 549 LPAE-IGRLTSLKGLYLDENELTSVPAEIGQLTSLQELWLNDNQLTSLPAEIGLLIWLHI 607

Query: 235 FYMGNNALSALPAELGKLSKLG 256
             +G N L+++PA + KL   G
Sbjct: 608 LRLGGNQLTSMPAAIRKLKAAG 629



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 116/227 (51%), Gaps = 15/227 (6%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           +L   +P  +G LS L  LDL    + S+P+ I    SL   ++ NN L+++PAE+G+L+
Sbjct: 15  DLTGAVPAEVGRLSALKVLDLRNYHLTSVPAEIGQLTSLGVLHLDNNQLTSVPAEIGQLT 74

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL        QL  L+ L+L +N L+ +P EIG++ +L KL L GN L +
Sbjct: 75  SLTHLYLGCNQLTSVPAWIGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTS 134

Query: 313 LRSSLVNGPTPALLK---YLRSRLPENEDSEASTTKEDLITMATRLS--------VTS-K 360
           + + +  G   AL +   Y         +    T+  DL     +L+        +TS K
Sbjct: 135 VPAEI--GQLVALTELTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLK 192

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           EL+L G  L+++P+EI +   +  L L  N +  +P E+    +L++
Sbjct: 193 ELTLYGNQLTSVPAEIGQLAALQWLSLKDNKLTSVPAEIGQLRALKL 239



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 42/222 (18%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+L +  L  VP E+              +   L+ L LA N +  L  ++  L  L  
Sbjct: 446 GLHLRDNRLTGVPAEIG-------------QLTSLEWLYLAENQLTSLPAEIGQLTSLVE 492

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
             +  N+L+ +PA IG+L  L  LD+  N +  +P E+G  TAL + + S N L  LP+ 
Sbjct: 493 SLLGGNQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRNALTLLPAE 552

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +GR  +L       N +TS+P ++   + + +L +  N+LT L                 
Sbjct: 553 IGRLTSLKGLYLDENELTSVPAEIGQLTSLQELWLNDNQLTSL----------------- 595

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI-----SGC 229
                  P  IG L  L  L L  N++ S+P++I     +GC
Sbjct: 596 -------PAEIGLLIWLHILRLGGNQLTSMPAAIRKLKAAGC 630


>gi|255078122|ref|XP_002502641.1| predicted protein [Micromonas sp. RCC299]
 gi|226517906|gb|ACO63899.1| predicted protein [Micromonas sp. RCC299]
          Length = 505

 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 186/395 (47%), Gaps = 51/395 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L  VP E+              +   L+KL L  N +  +  ++  L LL  L
Sbjct: 101 LNLGGNRLTSVPAEI-------------GQLTSLEKLNLYCNQLTIVPAEIGQLALLERL 147

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+L+ +PA IG+L  L  LD+  N +  +P EI   T+L       NQL  +P+ +
Sbjct: 148 NLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGNQLTSVPAEI 207

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L      NN +TS+P ++   + + KL ++ N+L  +    I   T LTE+  S 
Sbjct: 208 GQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAE-IGRLTSLTEVDLSF 266

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L  L LH N++  +P+ I    SL    + NN L+++PAE+G+L+
Sbjct: 267 NRLTSVPAEIGQLTSLTELHLHINKLTRVPAEIGQLASLVRLRLDNNQLTSVPAEIGQLT 326

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  QL  L  L L  N L+ +P EIG++T+L  L L GN L +
Sbjct: 327 SLEWLGLGGNQLTSVPAEIGQLASLERLLLYGNQLTSVPAEIGQLTSLEWLGLNGNILTS 386

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +         PA +  L S                            KEL L G  L+++
Sbjct: 387 V---------PAEIGQLTSL---------------------------KELYLHGNELTSV 410

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           P+EI +   + +L L  N +  +P E+    SL V
Sbjct: 411 PAEIGQLTSLQRLYLGDNQLTRVPAEIGQLTSLTV 445



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 190/386 (49%), Gaps = 55/386 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L  VP E+              +   L +L L  N +  L  ++  L  LT L
Sbjct: 147 LNLDGNQLTSVPAEI-------------GQLTSLTELDLGRNKLTSLPTEIWQLTSLTCL 193

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+ +PA IG+L  LK LD+  N +  +P EIG   +L K    +NQL  +P+ +
Sbjct: 194 HLQGNQLTSVPAEIGQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAEI 253

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           GR  +L++   S N +TS+P ++   + +++L +  NKLT                    
Sbjct: 254 GRLTSLTEVDLSFNRLTSVPAEIGQLTSLTELHLHINKLTR------------------- 294

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                +P  IG L+ L+RL L  N++ S+P+ I    SL    +G N L+++PAE+G+L+
Sbjct: 295 -----VPAEIGQLASLVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGNQLTSVPAEIGQLA 349

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L+ NQL     E  QL  L  L L+ N L+ +P EIG++T+L++L L GN L +
Sbjct: 350 SLERLLLYGNQLTSVPAEIGQLTSLEWLGLNGNILTSVPAEIGQLTSLKELYLHGNELTS 409

Query: 313 LRSSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +         PA +  L S  RL   ++       E  I   T L+V    L L    LS
Sbjct: 410 V---------PAEIGQLTSLQRLYLGDNQLTRVPAE--IGQLTSLTV----LGLNSNQLS 454

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELP 396
           ++P+EI +   + +LDL  N +  +P
Sbjct: 455 SLPAEIGQLTSVERLDLRCNELTSVP 480



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 166/319 (52%), Gaps = 24/319 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L    L  VP E+              +   L+ L L +N +  +  ++  L  L  L
Sbjct: 193 LHLQGNQLTSVPAEI-------------GQLASLKGLDLYNNQLTSVPAEIGQLASLEKL 239

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + +N+L+ +PA IG L  L  +D+SFN +  +P EIG  T+L +     N+L  +P+ +
Sbjct: 240 RLDNNQLASVPAEIGRLTSLTEVDLSFNRLTSVPAEIGQLTSLTELHLHINKLTRVPAEI 299

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L   +  NN +TS+P ++   + +  L + GN+LT +    I     L  L+   
Sbjct: 300 GQLASLVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGNQLTSVPAE-IGQLASLERLLLYG 358

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L  L L+ N + S+P+ I    SL E Y+  N L+++PAE+G+L+
Sbjct: 359 NQLTSVPAEIGQLTSLEWLGLNGNILTSVPAEIGQLTSLKELYLHGNELTSVPAEIGQLT 418

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  QL  L+VL L++N LS LP EIG++T++ +L L  N L +
Sbjct: 419 SLQRLYLGDNQLTRVPAEIGQLTSLTVLGLNSNQLSSLPAEIGQLTSVERLDLRCNELTS 478

Query: 313 LRSSLVNGPTPALLKYLRS 331
           +         PA ++ LR+
Sbjct: 479 V---------PAAIRELRA 488



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 192/361 (53%), Gaps = 15/361 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L ++ +  +  ++  L  L  LN+  N+L+ +PA IG+L +L+ L +  + +  +
Sbjct: 29  LRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLRLGGSKLTSV 88

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+LV+ +   N+L  +P+ +G+  +L       N +T +P ++   + + +L+
Sbjct: 89  PAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLN 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++GN+LT +    I   T LTEL   +N L  +P  I  L+ L  L L  N++ S+P+ I
Sbjct: 149 LDGNQLTSVPAE-IGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGNQLTSVPAEI 207

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL    + NN L+++PAE+G+L+ L  L L +NQL     E  +L  L+ +DLS N
Sbjct: 208 GQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAEIGRLTSLTEVDLSFN 267

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ +P EIG++T+L +L L  N L  + + +       L   +R RL  N+ +      
Sbjct: 268 RLTSVPAEIGQLTSLTELHLHINKLTRVPAEIGQ-----LASLVRLRLDNNQLTSVPAEI 322

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             L ++        + L L G  L+++P+EI +   + +L L  N +  +P E+    SL
Sbjct: 323 GQLTSL--------EWLGLGGNQLTSVPAEIGQLASLERLLLYGNQLTSVPAEIGQLTSL 374

Query: 406 Q 406
           +
Sbjct: 375 E 375



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 165/325 (50%), Gaps = 15/325 (4%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +PA IG L  L+ LD+  + +  +P EIG  T+L K +   NQL  +P+ +G+   L   
Sbjct: 19  VPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERL 78

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           +   + +TS+P ++   + + +L++ GN+LT +    I   T L +L    N L  +P  
Sbjct: 79  RLGGSKLTSVPAEIGQLTSLVELNLGGNRLTSVPAE-IGQLTSLEKLNLYCNQLTIVPAE 137

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L+ L RL+L  N++ S+P+ I    SL E  +G N L++LP E+ +L+ L  L L  
Sbjct: 138 IGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQG 197

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL     E  QL  L  LDL NN L+ +P EIG++ +L KL L  N L ++        
Sbjct: 198 NQLTSVPAEIGQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASV-------- 249

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
            PA +  L S    +      T+    I   T L+    EL L    L+ +P+EI +   
Sbjct: 250 -PAEIGRLTSLTEVDLSFNRLTSVPAEIGQLTSLT----ELHLHINKLTRVPAEIGQLAS 304

Query: 382 ITKLDLSRNSIQELPPELSSCASLQ 406
           + +L L  N +  +P E+    SL+
Sbjct: 305 LVRLRLDNNQLTSVPAEIGQLTSLE 329



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 32/195 (16%)

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
           ++P+ I    +L E  + N+ L+++PAE+G+L+ L  L+L+ NQL     E  QL  L  
Sbjct: 18  AVPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLER 77

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L  + L+ +P EIG++T+L +L L GN L ++         PA +  L          
Sbjct: 78  LRLGGSKLTSVPAEIGQLTSLVELNLGGNRLTSV---------PAEIGQL---------- 118

Query: 340 EASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
              T+ E L     +L++   E         L+L+G  L+++P+EI +   +T+LDL RN
Sbjct: 119 ---TSLEKLNLYCNQLTIVPAEIGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRN 175

Query: 391 SIQELPPELSSCASL 405
            +  LP E+    SL
Sbjct: 176 KLTSLPTEIWQLTSL 190


>gi|421118971|ref|ZP_15579298.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348311|gb|EKO99137.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 498

 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 198/364 (54%), Gaps = 19/364 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N++  L +++  L  L  LN++  KL+ LP  IG+L  L+ LD+SFNS+  
Sbjct: 95  NLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTT 154

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+G    L + D   N+L  LP  +G+  NL +   ++N +T+LP+++     + +L
Sbjct: 155 LPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 214

Query: 166 DVEGNKLTVLSNNLIASWTMLT-ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           D+  N+LT L   +     + T  LI ++  L  +P+ IG L  L  L+L  N++ ++P 
Sbjct: 215 DLHRNQLTTLPKEIGQLQNLKTLNLIVTQ--LTTLPKEIGELQNLKTLNLLDNQLTTLPK 272

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    +  N ++ALP E+G+L  L  LDLH NQL     E  QL+ L  LDL 
Sbjct: 273 EIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLH 332

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS 342
            N L+ LP EIG++  L++L L  N L TL         P  ++ L++ R+ + ++++ +
Sbjct: 333 QNQLTTLPKEIGQLQNLQELCLDENQLTTL---------PKEIEQLQNLRVLDLDNNQLT 383

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           T  ++++ + + L V    L+L    LS +P EI +   +  L L  N +  LP E+   
Sbjct: 384 TLPKEVLRLQS-LQV----LALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQL 438

Query: 403 ASLQ 406
            +LQ
Sbjct: 439 QNLQ 442



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 161/345 (46%), Gaps = 56/345 (16%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++ + KL+ LP  IG+L  L+ LD+SFNS+  +P EIG    L + D S N L  LP 
Sbjct: 52  TLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     ++  +T+LP+++     + +LD+  N LT L                
Sbjct: 112 EVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ +G L  L RLDLHQNR+ ++P  I    +L E  + +N L+ LP E+ +
Sbjct: 156 --------PKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDLH NQL     E  QL+ L  L+L    L+ LP EIG++  L+ L L  N L
Sbjct: 208 LRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQL 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE--------- 361
            TL   +  G    L                    E L+    R++   KE         
Sbjct: 268 TTLPKEI--GELQNL--------------------EILVLRENRITALPKEIGQLQNLQW 305

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L L    L+ +P EI +   + +LDL +N +  LP E+    +LQ
Sbjct: 306 LDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQ 350



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 172/339 (50%), Gaps = 15/339 (4%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++S N L+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + + +S +L  L
Sbjct: 73  LQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTL 132

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G+  NL +   S N +T+LP+++     + +LD+  N+L  L    I     L EL
Sbjct: 133 PKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPME-IGQLKNLQEL 191

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N L  +P+ I  L  L  LDLH+N++ ++P  I    +L    +    L+ LP E+
Sbjct: 192 DLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEI 251

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L TL+L  NQL     E  +L+ L +L L  N ++ LP EIG++  L+ L L  N
Sbjct: 252 GELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQN 311

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L  L   +  G    L      RL  +++   +  KE  I     L    +EL L+   
Sbjct: 312 QLTILPKEI--GQLQNL-----QRLDLHQNQLTTLPKE--IGQLQNL----QELCLDENQ 358

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           L+ +P EI +   +  LDL  N +  LP E+    SLQV
Sbjct: 359 LTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQV 397



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 140/269 (52%), Gaps = 2/269 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++R L  L  L++  N+L+ LP  IG+L  LK+L++    +  
Sbjct: 187 NLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTT 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +   NQL  LP  +G   NL       N IT+LP+++     +  L
Sbjct: 247 LPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWL 306

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT+L    I     L  L   +N L  +P+ IG L  L  L L +N++ ++P  
Sbjct: 307 DLHQNQLTILPKE-IGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKE 365

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + NN L+ LP E+ +L  L  L L SN+L     E  QL+ L VL L +
Sbjct: 366 IEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALIS 425

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N L+ LP EIG++  L++L L  N L T 
Sbjct: 426 NQLTTLPKEIGQLQNLQELCLDENQLTTF 454



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 136/266 (51%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L  LN+   +L+ LP  IGEL  LK+L++  N +  
Sbjct: 210 NLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTT 269

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N++  LP  +G+  NL       N +T LP+++     + +L
Sbjct: 270 LPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRL 329

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L    I     L EL   +N L  +P+ I  L  L  LDL  N++ ++P  
Sbjct: 330 DLHQNQLTTLPKE-IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKE 388

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +    SL    +G+N LS LP E+G+L  L  L L SNQL     E  QL+ L  L L  
Sbjct: 389 VLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDE 448

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+  P EI ++  L++L L  NPL
Sbjct: 449 NQLTTFPKEIRQLKNLQELHLYLNPL 474



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L VL++ +N+L+ LP  +  L  L+ L +  N +  
Sbjct: 348 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 407

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP  +G+  NL +     N +T+ P+++     + +L
Sbjct: 408 LPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQEL 467

Query: 166 DVEGNKLT 173
            +  N L+
Sbjct: 468 HLYLNPLS 475



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L VL +  N+LS LP  IG+L  L+ L +  N +  
Sbjct: 371 NLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTT 430

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 431 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 476


>gi|428164461|gb|EKX33486.1| hypothetical protein GUITHDRAFT_81410 [Guillardia theta CCMP2712]
          Length = 493

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/375 (31%), Positives = 195/375 (52%), Gaps = 18/375 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           ++Q L L  N +  L     ++  L  L +SHN L  LP +IG L  L+ LD++ N +  
Sbjct: 43  NVQSLALDFNQLNSLPNQFGDMTALVTLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRS 102

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  +G    + +  C++NQL  +P+++G C  L     S N I++LP ++   +KM +L
Sbjct: 103 LPQTVGFLRLMSELKCNANQLTTVPTTIGECTALRQLDLSFNAISALPLEIGRLTKMKQL 162

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  +  + I + T+L EL   +N L G+P  +G++ +L  L +  N++ ++P++
Sbjct: 163 LLNNNRLDSIPAS-IGTMTLLQELNLFENPLKGLPTELGNIQKLKTLVVDVNQLRTLPAT 221

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I     L E  +G+N +  LPA +G L+ L TL L  N L E   E   L  L+ L LS 
Sbjct: 222 IGALGQLRELQLGDNRIENLPASIGSLTSLNTLILTDNNLPEIPAEIGYLTNLTFLSLSG 281

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR------SRLPENED 338
           N ++ LP EIG ++ LR L L  N L +L  S+ +    ALL+ L         LPE+  
Sbjct: 282 NPITSLPLEIGGLSALRALNLAKNSLISLPVSIGDL---ALLQVLHLHENELEALPESIG 338

Query: 339 SEASTT-----KEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
             ++ T       +L ++   + V S   EL L+G  L+ +P  I    E+  L+L  N 
Sbjct: 339 DLSALTDLRLDHNNLTSLPPEVGVMSSLTELLLDGNQLNTLPLSIGRLTELQVLNLDGNR 398

Query: 392 IQELPPELSSCASLQ 406
           +  LPPE++   +L+
Sbjct: 399 LSLLPPEVAGMTALR 413



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 179/357 (50%), Gaps = 38/357 (10%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           +A N I  L   +  L  L  L V HN++SELP +IG+L+ ++SL + FN +  +P++ G
Sbjct: 3   IADNQIVHLPASIGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQFG 62

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
             TALV    S N LK LP+S+G   NL     ++N + SLP+ +     MS+L    N+
Sbjct: 63  DMTALVTLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCNANQ 122

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT +    I   T L +L  S N ++ +P  IG L+++ +L L+ NR+ SIP+SI     
Sbjct: 123 LTTVPTT-IGECTALRQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMTL 181

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L E  +  N L  LP ELG + KL TL +  NQL+        L +L  L L +N +  L
Sbjct: 182 LQELNLFENPLKGLPTELGNIQKLKTLVVDVNQLRTLPATIGALGQLRELQLGDNRIENL 241

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P  IG +T+L  L+LT N L  +         PA + YL                     
Sbjct: 242 PASIGSLTSLNTLILTDNNLPEI---------PAEIGYL--------------------- 271

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             T L+     LSL G  ++++P EI     +  L+L++NS+  LP  +   A LQV
Sbjct: 272 --TNLTF----LSLSGNPITSLPLEIGGLSALRALNLAKNSLISLPVSIGDLALLQV 322



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 168/364 (46%), Gaps = 38/364 (10%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L++L L+ N I  L  ++  L  +  L +++N+L  +PA+IG + +L+ L++  N 
Sbjct: 132 ECTALRQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMTLLQELNLFENP 191

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P E+G+   L       NQL+ LP+++G    L + +  +N I +LP         
Sbjct: 192 LKGLPTELGNIQKLKTLVVDVNQLRTLPATIGALGQLRELQLGDNRIENLPAS------- 244

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
                            I S T L  LI + N L  +P  IG L+ L  L L  N I S+
Sbjct: 245 -----------------IGSLTSLNTLILTDNNLPEIPAEIGYLTNLTFLSLSGNPITSL 287

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P  I G  +L    +  N+L +LP  +G L+ L  L LH N+L+        L  L+ L 
Sbjct: 288 PLEIGGLSALRALNLAKNSLISLPVSIGDLALLQVLHLHENELEALPESIGDLSALTDLR 347

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           L +N+L+ LPPE+G M++L +LLL GN L TL  S+              RL E +    
Sbjct: 348 LDHNNLTSLPPEVGVMSSLTELLLDGNQLNTLPLSI-------------GRLTELQVLNL 394

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
              +  L+          +EL +    LS +P  I +   +  L LS N +  LP  ++ 
Sbjct: 395 DGNRLSLLPPEVAGMTALRELWVHDNKLSVVPEGIADLTNLNVLTLSNNELTVLPANMTR 454

Query: 402 CASL 405
             SL
Sbjct: 455 LVSL 458



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 134/260 (51%), Gaps = 25/260 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  LIL  NN+ ++  ++  L  LT L++S N ++ LP  IG L  L++L+++ NS++ +
Sbjct: 251 LNTLILTDNNLPEIPAEIGYLTNLTFLSLSGNPITSLPLEIGGLSALRALNLAKNSLISL 310

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG    L       N+L+ LP S+G    L+D +  +N +TSLP ++   S +++L 
Sbjct: 311 PVSIGDLALLQVLHLHENELEALPESIGDLSALTDLRLDHNNLTSLPPEVGVMSSLTELL 370

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++GN+                        LN +P +IG L+ L  L+L  NR+  +P  +
Sbjct: 371 LDGNQ------------------------LNTLPLSIGRLTELQVLNLDGNRLSLLPPEV 406

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
           +G  +L E ++ +N LS +P  +  L+ L  L L +N+L        +L  L+ L + +N
Sbjct: 407 AGMTALRELWVHDNKLSVVPEGIADLTNLNVLTLSNNELTVLPANMTRLVSLNELWIKDN 466

Query: 286 SLSGLPPEIGKMTTLRKLLL 305
           +L   P   G +  LR LL+
Sbjct: 467 NLKSHPFRQGLLPNLRVLLV 486



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 14/215 (6%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P +IG LS L  L +  N+I  +P SI    ++    +  N L++LP + G ++ L TL
Sbjct: 11  LPASIGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQFGDMTALVTL 70

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            +  N LK        L  L +LDL++N L  LP  +G +  + +L    N L T+ +++
Sbjct: 71  TISHNLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCNANQLTTVPTTI 130

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
             G   AL +     L  N  S        L  M        K+L L    L +IP+ I 
Sbjct: 131 --GECTALRQL---DLSFNAISALPLEIGRLTKM--------KQLLLNNNRLDSIPASIG 177

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQVKFSDL 412
               + +L+L  N ++ LP EL +   L+    D+
Sbjct: 178 TMTLLQELNLFENPLKGLPTELGNIQKLKTLVVDV 212


>gi|327267576|ref|XP_003218575.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Anolis
           carolinensis]
          Length = 582

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/398 (31%), Positives = 198/398 (49%), Gaps = 56/398 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           ++L +  LR++P  VY+                L  L L  N I  +++D++NL LLT+L
Sbjct: 174 VDLRHNKLREIPPVVYR-------------LTSLTTLYLRFNRITAVEKDIKNLSLLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T + K D   N+L +LP S+
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDSI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++++P  LA CSK+ +L++E N ++ L   L++S   LT L  ++
Sbjct: 281 GNLSSLKSLGLRYNRLSAIPRSLAQCSKLDELNLENNIISALPEGLLSSLVNLTSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRSLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YLR                DL     RL +T+ +       
Sbjct: 459 KLESL---------PNEIAYLR----------------DL----QRLILTNNQ------- 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           LS +P  I     +T L L  N + +LP E+ +  +L+
Sbjct: 483 LSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLE 520



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 167/360 (46%), Gaps = 35/360 (9%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           +L LA  +I  L   ++ L  LT L +  NKL  LP  +G L  L +L +S NS+  +PD
Sbjct: 104 RLDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPPEVGCLVNLVTLALSENSLTSLPD 163

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            + +   L   D   N+L+E+P  + R  +L+      N IT++ +D+ + S ++ L + 
Sbjct: 164 SLDNLKQLRMVDLRHNKLREIPPVVYRLTSLTTLYLRFNRITAVEKDIKNLSLLTMLSIR 223

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            NK+  L    I     L  L  + N L  +P+ IG+ +++ +LDL  N +L +P SI  
Sbjct: 224 ENKIKQLPAE-IGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDSIGN 282

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 288
             SL    +  N LSA+P  L + SKL  L+L                       NN +S
Sbjct: 283 LSSLKSLGLRYNRLSAIPRSLAQCSKLDELNLE----------------------NNIIS 320

Query: 289 GLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
            LP   +  +  L  L L  N     +S  V GP+     Y         + E +   + 
Sbjct: 321 ALPEGLLSSLVNLTSLTLARN---CFQSYPVGGPSQFSTIYAL-------NMEHNRINKI 370

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
              + +R  V SK L+++   L+++P +      + +L+L+ N + ++P ++S   SL+V
Sbjct: 371 PFGIFSRAKVLSK-LNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEV 429



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 39/282 (13%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           V+ D +   +  LPSS+     L++     N + SLP +                     
Sbjct: 103 VRLDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPPE--------------------- 141

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
              +     L  L  S+N L  +P+++ +L +L  +DL  N++  IP  +    SL   Y
Sbjct: 142 ---VGCLVNLVTLALSENSLTSLPDSLDNLKQLRMVDLRHNKLREIPPVVYRLTSLTTLY 198

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           +  N ++A+  ++  LS L  L +  N++K+   E  +L  L  LD+++N L  LP EIG
Sbjct: 199 LRFNRITAVEKDIKNLSLLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIG 258

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
             T + KL L  N L  L  S+ N  +   L    +RL     S A  +K D        
Sbjct: 259 NCTQITKLDLQHNELLDLPDSIGNLSSLKSLGLRYNRLSAIPRSLAQCSKLD-------- 310

Query: 356 SVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELP 396
                EL+LE   +SA+P  +  +   +T L L+RN  Q  P
Sbjct: 311 -----ELNLENNIISALPEGLLSSLVNLTSLTLARNCFQSYP 347



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 87/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLNKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L  LP  IG L  L+ LD+  N +  +P+EI     L +   ++
Sbjct: 421 VSGLVSLEVLILSNNLLRSLPHGIGNLRKLRELDLEENKLESLPNEIAYLRDLQRLILTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G  +NL+      N +T LPE+                        LA C
Sbjct: 481 NQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L  L   ++A
Sbjct: 541 SKLSIMSIENCPLNTLPAQIVA 562



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 17/207 (8%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSS+     L E Y+  N L +LP E+G L  L TL L  N L    
Sbjct: 103 VRLDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPPEVGCLVNLVTLALSENSLTSLP 162

Query: 270 VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L+ L ++DL +N L  +PP + ++T+L  L L  N +  +   + N    +LL  
Sbjct: 163 DSLDNLKQLRMVDLRHNKLREIPPVVYRLTSLTTLYLRFNRITAVEKDIKNL---SLLTM 219

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           L  R  EN+  +      +L  + T        L +    L  +P EI    +ITKLDL 
Sbjct: 220 LSIR--ENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCTQITKLDLQ 269

Query: 389 RNSIQELPP---ELSSCASLQVKFSDL 412
            N + +LP     LSS  SL ++++ L
Sbjct: 270 HNELLDLPDSIGNLSSLKSLGLRYNRL 296


>gi|380014404|ref|XP_003691222.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Apis
           florea]
          Length = 602

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 213/423 (50%), Gaps = 35/423 (8%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--------------NFDEAGEGDKWWEAVDLQK 49
           I+ +AR +G+LNLS+R L  VPN V+                 D   E ++WWE   L+ 
Sbjct: 30  IIISARKNGNLNLSSRGLFTVPNRVWTINDLTEEEIRNLHVELDYVHENERWWEQEPLKM 89

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L+ N+++ +   +  L  LT L + +N L +LP  IG L  L+ L++S N + K+P E
Sbjct: 90  LDLSCNSLKAIDSKVECLTELTTLYLHNNLLEDLPVEIGNLKKLEILNLSNNKLEKLPYE 149

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
               T L +    +N +K+L  + G  + L+    S N +  LP  +    ++  LD+  
Sbjct: 150 FYKLTELHQLSLKNNNIKQLDPAFGDFIMLTYLDLSYNNLIELPIGMGYLVRLVSLDLNH 209

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N L  L  +L  +   L +L AS N L  +P  +G L ++  + L  N++ + P  +SGC
Sbjct: 210 NMLKELPPDL-TNMRALQKLNASYNDLEMLP-PLGELRKVETVMLQTNKLTTFP-DMSGC 266

Query: 230 CSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             L   ++ +N ++ +    L  + +L TL L +NQ++    E  +L  L + DLS+N +
Sbjct: 267 IQLRILHLADNNITEIDMSCLEGVGQLKTLTLGNNQIESIPEEIIKLVYLEIFDLSHNKI 326

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NEDSEASTT-- 344
           + +P  IG M  +++ ++ GN ++ +R  ++   T  +LK+++  L   N DS+   T  
Sbjct: 327 TLIPEHIGLMPNIKQFIIDGNDVKNIRMDIIRCGTSRILKHIQQGLKSTNLDSKRHVTLN 386

Query: 345 -----KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE---AGEITKLDLSRNSIQELP 396
                  D  TM      ++K LSL G NL+ IP E+ E     ++  +DLSRN    LP
Sbjct: 387 ASTNIYPDRYTMH-----STKLLSLAGQNLTEIPQEVLENACKADVGTVDLSRNKFSTLP 441

Query: 397 PEL 399
            EL
Sbjct: 442 DEL 444



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 150/331 (45%), Gaps = 63/331 (19%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N IE + E++  L  L + ++SHNK++ +P  IG +  +K   +  N +  I
Sbjct: 293 LKTLTLGNNQIESIPEEIIKLVYLEIFDLSHNKITLIPEHIGLMPNIKQFIIDGNDVKNI 352

Query: 107 PDEI---GSATAL-----------------VKFDCSSN-------------------QLK 127
             +I   G++  L                 V  + S+N                    L 
Sbjct: 353 RMDIIRCGTSRILKHIQQGLKSTNLDSKRHVTLNASTNIYPDRYTMHSTKLLSLAGQNLT 412

Query: 128 ELPSSL--GRC-LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           E+P  +    C  ++     S N  ++LP++L   +K++ L +  N+LT +   +   + 
Sbjct: 413 EIPQEVLENACKADVGTVDLSRNKFSTLPDELHIITKVADLKLTSNQLTHIPEWICEKYK 472

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L  SKN L  +P  IG L  L  L++  NR   IP SI    SL E  + N+ L  
Sbjct: 473 YLQILDLSKNCLESLPFNIGLLKYLQELNISFNRYKEIPESIYDVDSL-EILIANDNL-- 529

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
                  ++ +  L L   Q           +L +L+L+NN++  +PPE+G +  LR L 
Sbjct: 530 -------ITNIDILSLQKLQ-----------KLVILNLANNNIGYIPPELGNLKNLRNLS 571

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           L+GN  +  R +++   T  +L YLR+R+P+
Sbjct: 572 LSGNCFKQPRQAILMKSTEEILAYLRNRIPQ 602



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 179/421 (42%), Gaps = 81/421 (19%)

Query: 29  YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
           Y N  E   G  +   V L  L L HN +++L  DL N+  L  LN S+N L  LP  +G
Sbjct: 186 YNNLIELPIGMGYL--VRLVSLDLNHNMLKELPPDLTNMRALQKLNASYNDLEMLPP-LG 242

Query: 89  ELHMLKSLDVSFNSIMKIPDEIG---------SATALVKFDCS--------------SNQ 125
           EL  ++++ +  N +   PD  G         +   + + D S              +NQ
Sbjct: 243 ELRKVETVMLQTNKLTTFPDMSGCIQLRILHLADNNITEIDMSCLEGVGQLKTLTLGNNQ 302

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT- 184
           ++ +P  + + + L  F  S+N IT +PE +     + +  ++GN +  +  ++I   T 
Sbjct: 303 IESIPEEIIKLVYLEIFDLSHNKITLIPEHIGLMPNIKQFIIDGNDVKNIRMDIIRCGTS 362

Query: 185 ----MLTELIASKNLLNGMPETIGSLSRLI--RLDLHQNRILS--------IPSSI--SG 228
                + + + S NL +    T+ + + +   R  +H  ++LS        IP  +  + 
Sbjct: 363 RILKHIQQGLKSTNLDSKRHVTLNASTNIYPDRYTMHSTKLLSLAGQNLTEIPQEVLENA 422

Query: 229 C-CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR--LSVLDLSNN 285
           C   +    +  N  S LP EL  ++K+  L L SNQL       C+    L +LDLS N
Sbjct: 423 CKADVGTVDLSRNKFSTLPDELHIITKVADLKLTSNQLTHIPEWICEKYKYLQILDLSKN 482

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  IG +  L++L ++ N  + +  S+ +  +  +L                   
Sbjct: 483 CLESLPFNIGLLKYLQELNISFNRYKEIPESIYDVDSLEIL----------------IAN 526

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           ++LIT    LS+   +                   ++  L+L+ N+I  +PPEL +  +L
Sbjct: 527 DNLITNIDILSLQKLQ-------------------KLVILNLANNNIGYIPPELGNLKNL 567

Query: 406 Q 406
           +
Sbjct: 568 R 568



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 37/168 (22%)

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N+L A+ +++  L++L TL LH+N L++  VE   L+ L +L+LSNN L  LP E  K+T
Sbjct: 95  NSLKAIDSKVECLTELTTLYLHNNLLEDLPVEIGNLKKLEILNLSNNKLEKLPYEFYKLT 154

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L +L L  N ++ L         PA   ++                     M T L ++
Sbjct: 155 ELHQLSLKNNNIKQL--------DPAFGDFI---------------------MLTYLDLS 185

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                    NL  +P  +     +  LDL+ N ++ELPP+L++  +LQ
Sbjct: 186 YN-------NLIELPIGMGYLVRLVSLDLNHNMLKELPPDLTNMRALQ 226


>gi|418744883|ref|ZP_13301228.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794214|gb|EKR92124.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 559

 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 136/427 (31%), Positives = 198/427 (46%), Gaps = 48/427 (11%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWW-----EAVDLQKL---ILAHNNIEKLKED 63
           LNLSN  L  +PNE+   +N +E             E V LQ+L    LA N +  L ++
Sbjct: 66  LNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKE 125

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L + +N L+ LP+ IG L  LK L +  N +M +P EIG    L +     
Sbjct: 126 IGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLED 185

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL D   SNN +T+LP ++     + +L++  N L  L N  I   
Sbjct: 186 NQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNE-IGKL 244

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL  S N L  +P+ IG L  L  L L  N+++++P  I     L   Y+ NN L 
Sbjct: 245 QNLEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLE 304

Query: 244 ALPAELGKLSKLGTLDLHSNQL----KEYCV-------------------EACQLR-LSV 279
            LP E+GKL  L  L L  NQL    +E                      E  QL  L  
Sbjct: 305 TLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQY 364

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L+L NN L  LP EIG++  L+ L L  N L+TL + +        L+YL       E++
Sbjct: 365 LNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLEN---LQYLNL-----ENN 416

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           +  T   ++  +        + L+LE   L  +P+EI +   +  L+L  N ++ LP E+
Sbjct: 417 QLKTLPNEIGQLE-----NLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEI 471

Query: 400 SSCASLQ 406
               +LQ
Sbjct: 472 GRLENLQ 478



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 189/362 (52%), Gaps = 15/362 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L +N++  L +++  L  L  L +  N+L+ LP  IG+L  L+ LDVS N +  +
Sbjct: 155 LKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTL 214

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EIG   +L + + S+N L  LP+ +G+  NL +   SNN + +LP+++    ++  L 
Sbjct: 215 PNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQLRTLPQEIGQLQELEWLH 274

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +E N+L  L    I +   L  L    N L  +P  IG L  L RL L  N+++++P  I
Sbjct: 275 LEHNQLITLPQE-IGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEI 333

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L    + NN L+ LP E+G+L  L  L+L +NQLK    E  QL  L  L+L NN
Sbjct: 334 GTLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENN 393

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP EIG++  L+ L L  N L+TL + +        L+YL       E+++  T  
Sbjct: 394 QLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLEN---LQYLNL-----ENNQLKTLP 445

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            ++  +        + L+LE   L  +P+EI     +  L+L  N ++ LP E+    +L
Sbjct: 446 NEIGQLE-----NLQYLNLENNQLKTLPNEIGRLENLQYLNLENNQLKTLPNEIGRLQNL 500

Query: 406 QV 407
           +V
Sbjct: 501 KV 502



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 193/405 (47%), Gaps = 43/405 (10%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY++F+EA +       +D++ L L+ N +  L  ++  L  L  LN+S+N+L+ LP 
Sbjct: 24  NKVYRDFNEALKN-----PMDVRILDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPN 78

Query: 86  AIGELHMLKSLDV------SF-----------------NSIMKIPDEIGSATALVKFDCS 122
            IG L  L+ LD+      +F                 N ++ +P EIG+   L      
Sbjct: 79  EIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLK 138

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N L  LPS +GR   L      NN + +LP+++     + +L +E N+LT L    I  
Sbjct: 139 NNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQE-IGQ 197

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L  S N L  +P  IG L  L RL+L  N ++++P+ I    +L E  + NN L
Sbjct: 198 LENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQL 257

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
             LP E+G+L +L  L L  NQL     E   L +L  L L NN L  LP EIGK+ +L+
Sbjct: 258 RTLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLK 317

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L L  N L TL         P  +  L++    N  +    T  + I     L      
Sbjct: 318 RLHLEHNQLITL---------PQEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQY---- 364

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L+LE   L  +P+EI +   +  L+L  N ++ LP E+    +LQ
Sbjct: 365 LNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQ 409



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/311 (34%), Positives = 158/311 (50%), Gaps = 15/311 (4%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R+   LNLSN  L  +PNE+ K               +L++L L++N +  L +++  L 
Sbjct: 222 RSLKRLNLSNNLLITLPNEIGK-------------LQNLEELNLSNNQLRTLPQEIGQLQ 268

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L++ HN+L  LP  IG L  L+ L +  N +  +P+EIG   +L +     NQL  
Sbjct: 269 ELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLIT 328

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP  +G   NL +   SNN + +LP ++     +  L++E N+L  L N  I     L  
Sbjct: 329 LPQEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNE-IGQLENLQY 387

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L    N L  +P  IG L  L  L+L  N++ ++P+ I    +L    + NN L  LP E
Sbjct: 388 LNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNE 447

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L  L  L+L +NQLK    E  +L  L  L+L NN L  LP EIG++  L+ L L G
Sbjct: 448 IGQLENLQYLNLENNQLKTLPNEIGRLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGG 507

Query: 308 NPLRTLRSSLV 318
           N L TL   +V
Sbjct: 508 NQLVTLPQEIV 518



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 143/316 (45%), Gaps = 43/316 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLSN  LR +P E+              +  +L+ L L HN +  L +++  L  L  
Sbjct: 249 ELNLSNNQLRTLPQEI-------------GQLQELEWLHLEHNQLITLPQEIGTLQKLEY 295

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA----------------- 115
           L + +N L  LP  IG+L  LK L +  N ++ +P EIG+                    
Sbjct: 296 LYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNE 355

Query: 116 ------LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                 L   +  +NQLK LP+ +G+  NL      NN + +LP ++     +  L++E 
Sbjct: 356 IGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLEN 415

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+L  L N  I     L  L    N L  +P  IG L  L  L+L  N++ ++P+ I   
Sbjct: 416 NQLKTLPNE-IGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGRL 474

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            +L    + NN L  LP E+G+L  L  L+L  NQL     E   L+ L +L L N    
Sbjct: 475 ENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIVGLKHLQILKLKN---- 530

Query: 289 GLPPEIGKMTTLRKLL 304
            +P  + +  T+RKLL
Sbjct: 531 -IPALLSEKETIRKLL 545



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 16/248 (6%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           +  K D E NK+    N  + +   +  L  S N L  +P  IG L +L  L+L  NR+ 
Sbjct: 15  RFCKRDAEDNKVYRDFNEALKNPMDVRILDLSDNQLATLPNEIGKLRKLEWLNLSNNRLT 74

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
           ++P+ I    +L E  + +N L+  P E+ +L +L  L L  NQL     E   L +L  
Sbjct: 75  TLPNEIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQH 134

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLPENED 338
           L L NN L+ LP EIG++  L++L L  N L TL   +  G    L + YL       ED
Sbjct: 135 LYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEI--GKLQNLEQLYL-------ED 185

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           ++ +T  +++  +        ++L +   +L+ +P+EI +   + +L+LS N +  LP E
Sbjct: 186 NQLTTLPQEIGQLE-----NLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNE 240

Query: 399 LSSCASLQ 406
           +    +L+
Sbjct: 241 IGKLQNLE 248


>gi|340712839|ref|XP_003394961.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
           terrestris]
          Length = 610

 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 204/407 (50%), Gaps = 33/407 (8%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK+ R    L+L +  L ++P+ VYK               +L  L L  N +  + +++
Sbjct: 197 LKSLRV---LDLRHNKLSEIPDVVYK-------------LTNLTTLFLRFNRVRYVSDNI 240

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           RNL  LT+L++  NK+ ELPA IG+L  L + DVS N +  +P+EIG+   L   D   N
Sbjct: 241 RNLTNLTMLSLRENKIRELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHN 300

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L ++P ++GR + L+      N +TS+P+ LA+C  M +  VEGN+++ L + L+AS +
Sbjct: 301 ELLDIPDTIGRLVLLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLS 360

Query: 185 MLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNAL 242
            LT +  S+N     P       + +  ++L  N+I  IP  I S   +LA+  M  N L
Sbjct: 361 DLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQL 420

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           +ALP ++G    +  L+L +NQL +   +  C   L VL LSNN L  +P  I  +  LR
Sbjct: 421 TALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLR 480

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N + +L         P  + +LR        S   T+    I   T L+     
Sbjct: 481 VLDLEENKIESL---------PNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTY---- 527

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQV 407
           LS+   NL+ +P EI     +  L ++ N+ +  LP EL+ C +L +
Sbjct: 528 LSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSI 574



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 159/375 (42%), Gaps = 88/375 (23%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L    +R++P         AG G    + V+L    ++HN++E L E++ N   L+ L
Sbjct: 249 LSLRENKIRELP---------AGIG----KLVNLITFDVSHNHLEHLPEEIGNCVQLSTL 295

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ HN+L ++P  IG L +L  L + +N +  IP  + +   + +F    NQ+ +LP  L
Sbjct: 296 DLQHNELLDIPDTIGRLVLLTRLGLRYNRLTSIPKSLANCKLMDEFSVEGNQVSQLPDGL 355

Query: 134 -------------------------------------------------GRCLNLSDFKA 144
                                                             R  NL+    
Sbjct: 356 LASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNM 415

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLT---------------VLSNNL-------IAS 182
             N +T+LP D+     M +L++  N+LT               +LSNNL       IA+
Sbjct: 416 KENQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIAN 475

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L   +N +  +P  IG L  L +L L  N++ S+P +I    +L    +G N L
Sbjct: 476 LRKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNL 535

Query: 243 SALPAELGKLSKLGTLDLHSN-QLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEI--GKMT 298
           + LP E+G L  L +L ++ N  L     E A    LS++ + N  LS +PPEI  G  +
Sbjct: 536 NYLPEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPLSQIPPEIVAGGPS 595

Query: 299 TLRKLLLTGNPLRTL 313
            + + L    P R++
Sbjct: 596 LVIQFLKMQGPYRSM 610


>gi|398341370|ref|ZP_10526073.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 398

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/301 (34%), Positives = 160/301 (53%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS + L+ +PNE+              +  +LQ+L L++N ++ L +++  L  L VL
Sbjct: 49  LDLSQQKLKTLPNEI-------------EQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVL 95

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + HN+L  LP  I +L  L+ L +S+N +  +P EI     L +     NQL  LP+ +
Sbjct: 96  ELIHNQLETLPNEIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEI 155

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL   +  NN + +LPE++     +  L++  N+LT L N  I     L EL    
Sbjct: 156 GQLKNLQRLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNE-IGQLQNLQELYLGS 214

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L +L  L L  NR+ ++P+ I    +L + Y+G+N L+ LP E+G+L 
Sbjct: 215 NQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLK 274

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L TL L SN+L     +  QL+ L  LDL NN L+  P EI ++  L+ L L  N L T
Sbjct: 275 NLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTT 334

Query: 313 L 313
           L
Sbjct: 335 L 335



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 154/298 (51%), Gaps = 15/298 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L +  L  +PNE+              +  DLQ+L L++N ++ L +++R L  L  L
Sbjct: 95  LELIHNQLETLPNEI-------------EQLKDLQRLYLSYNQLKTLPKEIRQLQNLQEL 141

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L+ LP  IG+L  L+ L +  N +M +P+EIG    L   +   NQL  LP+ +
Sbjct: 142 YLRDNQLTTLPTEIGQLKNLQRLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEI 201

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL +    +N +T+LP ++    K+ +L +  N+LT L N  I     L +L    
Sbjct: 202 GQLQNLQELYLGSNQLTALPNEIGQLQKLQELSLSTNRLTTLPNE-IGQLQNLQDLYLGS 260

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L L  NR+ ++   I    +L    + NN L+  P E+ +L 
Sbjct: 261 NQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLK 320

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L  LDL SNQL     E  QL+ L V +L+NN L+ LP EIG++  L++L L  N L
Sbjct: 321 NLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQL 378



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 158/337 (46%), Gaps = 38/337 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  I +L  L+ L +S+N +  +P EIG    L   +   NQL+ LP+
Sbjct: 48  VLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLETLPN 107

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  +L     S N + +LP+++     + +L +  N+LT L    I     L  L  
Sbjct: 108 EIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTE-IGQLKNLQRLQL 166

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +PE IG L  L  L+L  N++ ++P+ I    +L E Y+G+N L+ALP E+G+
Sbjct: 167 WNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLTALPNEIGQ 226

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L +N+L     E  QL+ L  L L +N L+ LP EIG++  L+ L L  N L
Sbjct: 227 LQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRL 286

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL   +                            E L  +        K L L    L+
Sbjct: 287 TTLSKDI----------------------------EQLQNL--------KSLDLWNNQLT 310

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             P EI +   +  LDL  N +  LP E+    +LQV
Sbjct: 311 TFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQV 347



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 129/309 (41%), Gaps = 61/309 (19%)

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           + M + + I +   +   D S  +LK LP+ + +  NL     S N + +LP+++     
Sbjct: 32  TYMDLTEAIQNPLDVRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQN 91

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L++  N+L  L                        P  I  L  L RL L  N++ +
Sbjct: 92  LRVLELIHNQLETL------------------------PNEIEQLKDLQRLYLSYNQLKT 127

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P  I    +L E Y+ +N L+ LP E+G+L  L  L L +NQL     E  QL+ L  L
Sbjct: 128 LPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLQLWNNQLMTLPEEIGQLKNLQTL 187

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           +L  N L+ LP EIG++  L++L L  N L  L + +  G    L               
Sbjct: 188 NLGYNQLTALPNEIGQLQNLQELYLGSNQLTALPNEI--GQLQKL--------------- 230

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                              +ELSL    L+ +P+EI +   +  L L  N +  LP E+ 
Sbjct: 231 -------------------QELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIG 271

Query: 401 SCASLQVKF 409
              +LQ  +
Sbjct: 272 QLKNLQTLY 280



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 13/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+LS   L  +PNE+              +  +LQ L L  N +  L  ++  L  L  
Sbjct: 232 ELSLSTNRLTTLPNEI-------------GQLQNLQDLYLGSNQLTILPNEIGQLKNLQT 278

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ L   I +L  LKSLD+  N +   P EI     L   D  SNQL  LP  
Sbjct: 279 LYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKE 338

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           +G+  NL  F+ +NN +T+LP+++     + +L +  N+L+
Sbjct: 339 IGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLS 379


>gi|418755315|ref|ZP_13311522.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964326|gb|EKO32216.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 511

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 204/417 (48%), Gaps = 49/417 (11%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY++ D A +       +D++ L L  + +  L +++  L  L  LN+ +N+L+ LP 
Sbjct: 24  NKVYRDLDAALKN-----PMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPN 78

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            IG+L  L+ L +  N +  +P E+G+   L + +  +NQL  LP+ +G+  NL      
Sbjct: 79  EIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQALNLH 138

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG- 204
           NN + SLP+++    K+ +L + GN+L  L    I +   L EL  S++ L   PE IG 
Sbjct: 139 NNRLKSLPKEIGKLQKLERLYLGGNQLRTLPQE-IGTLQDLEELHLSRDQLKTFPEEIGK 197

Query: 205 --SLSRLI--------------------RLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
             SL RLI                    RL L  N++ ++P+ I    +L E  + NN L
Sbjct: 198 LRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQL 257

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
             LP E+G L  L  L L+SNQ +    +  QL+ L  L L++N L+ LP EIG++  L+
Sbjct: 258 VTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGQLENLQ 317

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK- 360
            L+L  N L++L   +  G     LK+L                  L  +   +    K 
Sbjct: 318 SLILARNQLKSLPKEI--GKLQK-LKWL------------ILANNQLTVLPQEIGQLEKL 362

Query: 361 -ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
            +L LE   L+ +P EIW+  ++  LDL+ N ++ LP E+     L+  + DL  N+
Sbjct: 363 EDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKLQKLE--YLDLSNNQ 417



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 157/307 (51%), Gaps = 15/307 (4%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+LS   L+  P E+ K                L++LIL  N +  L +++  L  L  
Sbjct: 180 ELHLSRDQLKTFPEEIGK-------------LRSLKRLILDSNQLVVLSQEIGKLRSLER 226

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+L+ LP  IG+L  L+ L++S N ++ +P EIG+   L      SNQ + LP  
Sbjct: 227 LILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQ 286

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +  NL D   ++N +T LP+++     +  L +  N+L  L    I     L  LI +
Sbjct: 287 IWQLQNLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQLKSLPKE-IGKLQKLKWLILA 345

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L +L  L L  N++ ++P  I     L    + NN L  LP E+GKL
Sbjct: 346 NNQLTVLPQEIGQLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKL 405

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            KL  LDL +NQL+    +  +L +L  LDLSNN L+ LP EIGK+  L  L L+GNP  
Sbjct: 406 QKLEYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLEDLDLSGNPFT 465

Query: 312 TLRSSLV 318
           T    +V
Sbjct: 466 TFPKEIV 472



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 142/298 (47%), Gaps = 22/298 (7%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R+   L L N  L  +PNE+ K               +L++L L++N +  L +++  L 
Sbjct: 222 RSLERLILENNQLATLPNEIGK-------------LQNLEELNLSNNQLVTLPQEIGALE 268

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L++  N+   LP  I +L  L+ L ++ N +  +P EIG    L     + NQLK 
Sbjct: 269 NLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQLKS 328

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--L 186
           LP  +G+   L     +NN +T LP+++    K+  L +E N+LT L   +   W +  L
Sbjct: 329 LPKEIGKLQKLKWLILANNQLTVLPQEIGQLEKLEDLYLEDNQLTTLPKEI---WKLEKL 385

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L  + N L  +PE IG L +L  LDL  N++  +P  I     L    + NN L+ LP
Sbjct: 386 KYLDLANNQLRLLPEEIGKLQKLEYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLP 445

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
            E+GKL KL  LDL  N    +  E   L+   +    N    +P  + +  T+RKLL
Sbjct: 446 KEIGKLEKLEDLDLSGNPFTTFPKEIVGLKHLKILKLKN----IPALLSERETIRKLL 499


>gi|410451688|ref|ZP_11305690.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014454|gb|EKO76584.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 511

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 127/416 (30%), Positives = 201/416 (48%), Gaps = 49/416 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L+N  L+ +P E+     E  +  KW        L L+ N ++ L +++  L  L VL
Sbjct: 66  LSLANNQLKTLPKEI-----ETLQKLKW--------LYLSENQLKTLPKEIGTLQNLEVL 112

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L  LP+ IG+L  LK L +  N ++ +P EIG+   L + + ++NQL+ LP  +
Sbjct: 113 DLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILPKEI 172

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA----SWTMLTE- 188
           G   +L D    NN + +LP+++     +  L++E N+L  L   + A     W  LT  
Sbjct: 173 GTLQHLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNN 232

Query: 189 -----------------LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                            L  + N L  +P+ IG L  L  L L  NR+ S P  I    +
Sbjct: 233 QLATLPKEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLPN 292

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L   ++  N  + LP E+G L +L  L+L  NQL     E  +L RL  L+L NN L+ L
Sbjct: 293 LQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATL 352

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EIG +  L+ L L  N L TL   +        L+ L+    + E ++ +T  E + T
Sbjct: 353 PKEIGTLQKLQHLYLANNQLATLPKEI------GQLQNLKDL--DLEYNQLATLPEAIGT 404

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +  RL      LSL+   L+ +P EI    +I KL+L+ N ++ LP  +    SL+
Sbjct: 405 LQ-RLEW----LSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQGIGQLQSLK 455



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 199/406 (49%), Gaps = 25/406 (6%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           + Y++F+EA +       +D++ L L +N +     ++  L  L  L++++N+L  LP  
Sbjct: 25  KFYRDFNEALKN-----PMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKE 79

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           I  L  LK L +S N +  +P EIG+   L   D   NQL+ LPS +G+  +L      +
Sbjct: 80  IETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEH 139

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N + +LP+++     + +L++  N+L +L    I +   L +L    N L  +P+ IG+L
Sbjct: 140 NQLITLPQEIGTLQDLEELNLANNQLRILPKE-IGTLQHLQDLNVFNNQLITLPQEIGTL 198

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  L+L  NR++++P  I     L   Y+ NN L+ LP E+GKL KL  L L +NQLK
Sbjct: 199 QNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPKEIGKLQKLEWLGLTNNQLK 258

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
               E  +L+ L  L L NN L   P EIG +  L++L L  N   TL         P  
Sbjct: 259 SLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTL---------PQE 309

Query: 326 LKYLRSRLPE-NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           +  L  RLP  N +    TT    I    RL      L+L    L+ +P EI    ++  
Sbjct: 310 IGTLH-RLPWLNLEHNQLTTLPQEIGRLERLEW----LNLYNNRLATLPKEIGTLQKLQH 364

Query: 385 LDLSRNSIQELPPELSSCASLQ---VKFSDLVTNKESCISGCYLYW 427
           L L+ N +  LP E+    +L+   ++++ L T  E+  +   L W
Sbjct: 365 LYLANNQLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEW 410



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 158/330 (47%), Gaps = 38/330 (11%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL+N  LR +P E+                  LQ L + +N +  L +++  L  L  
Sbjct: 157 ELNLANNQLRILPKEIGT-------------LQHLQDLNVFNNQLITLPQEIGTLQNLQS 203

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+ +N+L  LP  IG L  L+ L ++ N +  +P EIG    L     ++NQLK LP  
Sbjct: 204 LNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPKEIGKLQKLEWLGLTNNQLKSLPQE 263

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +    NN + S P+++     + +L +E N+ T L    I +   L  L   
Sbjct: 264 IGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQE-IGTLHRLPWLNLE 322

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L RL  L+L+ NR+ ++P  I     L   Y+ NN L+ LP E+G+L
Sbjct: 323 HNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKEIGQL 382

Query: 253 SKLGTLDLHSNQL-------------KEYCVEACQL-----------RLSVLDLSNNSLS 288
             L  LDL  NQL             +   ++  QL           ++  L+L+NN L 
Sbjct: 383 QNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLR 442

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            LP  IG++ +L+ L L+GNP  T    +V
Sbjct: 443 TLPQGIGQLQSLKDLDLSGNPFTTFPKEIV 472



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 13/155 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL N  L  +P E+       G   K      LQ L LA+N +  L +++  L  L  L
Sbjct: 342 LNLYNNRLATLPKEI-------GTLQK------LQHLYLANNQLATLPKEIGQLQNLKDL 388

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP AIG L  L+ L +  N +  +P+EIG+   +VK + ++NQL+ LP  +
Sbjct: 389 DLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQGI 448

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           G+  +L D   S N  T+ P+++     +  L ++
Sbjct: 449 GQLQSLKDLDLSGNPFTTFPKEIVGLKHLQMLKLK 483


>gi|242005578|ref|XP_002423641.1| leucine-rich repeat-containing protein, putative [Pediculus humanus
           corporis]
 gi|212506801|gb|EEB10903.1| leucine-rich repeat-containing protein, putative [Pediculus humanus
           corporis]
          Length = 595

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 210/440 (47%), Gaps = 74/440 (16%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-----------NFDEAGEGD--KWWEAVDLQKL 50
           ++K AR SG LNLS++ L   PNE++            +FD+  E D  KWWE   L+ L
Sbjct: 25  LMKEARKSGKLNLSDKQLTVWPNEIFDLSNSYSTNQNIDFDQTEEDDSCKWWEVEPLKTL 84

Query: 51  -----------------------ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
                                  +L HNN+  L  +L  L  L  LN+S N+L E P  +
Sbjct: 85  DLSSNYLKTIPVKIKILDSLVTLMLHHNNLNSLPGELGQLTKLVTLNLSQNELHEFPMEL 144

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
             +  LK++++S N     PD +     L   D SSN+++E+   +G    L +   S+N
Sbjct: 145 SGMKELKNINLSSNLCKIFPDFLYDLVLLNFLDISSNKIEEIKPGIGFLTRLVNLNLSHN 204

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            ++S+P ++  C  +  L++  NK+T                       +G+P+ +  + 
Sbjct: 205 NLSSIPLEITSCQALRDLNLSNNKITS----------------------SGLPD-LFDMK 241

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA-ELGKLSKLGTLDLHSNQLK 266
           +L  + L  N++ S+P  + GC  L E ++G N +  +   EL  LS L  ++L +N LK
Sbjct: 242 KLEMIQLQHNKLTSLP-CLRGCSELKEIHLGFNMIEEITVEELSTLSHLKVINLRNNHLK 300

Query: 267 EYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           E   E +C L L  LDLSNN L  LP  +  +  L  LL+ GN LR++R  +++G T  L
Sbjct: 301 ELPKEISCFLNLVRLDLSNNDLMELPNTLSILPHLEILLVEGNSLRSIRKDIIHGGTHRL 360

Query: 326 LKYLRSRLPENE-----DSEASTTKEDLITMATRLSV-TSKELSLEGMNLSAIPSEIWE- 378
           L +L+  +P  E      S+    KE+      R ++  SK L+L   +L  +   ++E 
Sbjct: 361 LNHLKLTMPLAEAEKYLQSQYPCEKEEF---PDRYAMRCSKALNLSNKSLCNVSKAVFEE 417

Query: 379 --AGEITKLDLSRNSIQELP 396
             A   T +DLS+N + E+P
Sbjct: 418 ALAVPCTIVDLSKNKLLEIP 437



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 152/333 (45%), Gaps = 59/333 (17%)

Query: 46  DLQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +L+++ L  N IE++  E+L  L  L V+N+ +N L ELP  I     L  LD+S N +M
Sbjct: 264 ELKEIHLGFNMIEEITVEELSTLSHLKVINLRNNHLKELPKEISCFLNLVRLDLSNNDLM 323

Query: 105 KIPDEI------------GSATALVKFDCSS-------NQLK------------------ 127
           ++P+ +            G++   ++ D          N LK                  
Sbjct: 324 ELPNTLSILPHLEILLVEGNSLRSIRKDIIHGGTHRLLNHLKLTMPLAEAEKYLQSQYPC 383

Query: 128 ---ELPSSLG-RC---LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
              E P     RC   LNLS+    N       E LA     + +D+  NKL  + +   
Sbjct: 384 EKEEFPDRYAMRCSKALNLSNKSLCNVSKAVFEEALA--VPCTIVDLSKNKLLEIPS--- 438

Query: 181 ASWTM---LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
            +W +   L +L  S N L  +P  I +   L  L++  N I  +P   + C  L E  +
Sbjct: 439 GTWLLCKTLNDLNISCNQLQEIPAEIKTCLNLRYLNISHNNIKELPDEFAACTRLRELDI 498

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPE 293
             N+ +  P  + K   L  L L +N++    ++A +L     L+ LDL+NN+L+ +PP 
Sbjct: 499 SFNSFNQPPMCVYKFPALEILLLGNNKIS--FIDAEELLNLKMLTHLDLTNNNLTEIPPL 556

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
           IGKMT LR L L GNPLR LR +++   T A+L
Sbjct: 557 IGKMTQLRTLKLEGNPLRVLRPAIIAKGTEAVL 589



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 107/241 (44%), Gaps = 26/241 (10%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L  L+   N LN +P  +G L++L+ L+L QN +   P  +SG   L    + +N     
Sbjct: 104 LVTLMLHHNNLNSLPGELGQLTKLVTLNLSQNELHEFPMELSGMKELKNINLSSNLCKIF 163

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  L  L  L  LD+ SN+++E       L RL  L+LS+N+LS +P EI     LR L 
Sbjct: 164 PDFLYDLVLLNFLDISSNKIEEIKPGIGFLTRLVNLNLSHNNLSSIPLEITSCQALRDLN 223

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE---------ASTTKEDLITMATRL 355
           L+ N        + +   P L    +  + + + ++          S  KE  +      
Sbjct: 224 LSNN-------KITSSGLPDLFDMKKLEMIQLQHNKLTSLPCLRGCSELKEIHLGFNMIE 276

Query: 356 SVTSKELS---------LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +T +ELS         L   +L  +P EI     + +LDLS N + ELP  LS    L+
Sbjct: 277 EITVEELSTLSHLKVINLRNNHLKELPKEISCFLNLVRLDLSNNDLMELPNTLSILPHLE 336

Query: 407 V 407
           +
Sbjct: 337 I 337



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 157/387 (40%), Gaps = 101/387 (26%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP-DEIGSATALVKFDC 121
           DL ++  L ++ + HNKL+ LP   G    LK + + FN I +I  +E+ + + L   + 
Sbjct: 236 DLFDMKKLEMIQLQHNKLTSLPCLRG-CSELKEIHLGFNMIEEITVEELSTLSHLKVINL 294

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
            +N LKELP  +   LNL     SNN +  LP  L+    +  L VEGN L  +  ++I 
Sbjct: 295 RNNHLKELPKEISCFLNLVRLDLSNNDLMELPNTLSILPHLEILLVEGNSLRSIRKDIIH 354

Query: 182 SWT--MLTELI-------ASKNLLNGMP----------------------ETIGSLSRLI 210
             T  +L  L        A K L +  P                      +++ ++S+ +
Sbjct: 355 GGTHRLLNHLKLTMPLAEAEKYLQSQYPCEKEEFPDRYAMRCSKALNLSNKSLCNVSKAV 414

Query: 211 R----------LDLHQNRILSIPSSISGCC-SLAEFYMGNNALSALPAELGKLSKLGTLD 259
                      +DL +N++L IPS     C +L +  +  N L  +PAE           
Sbjct: 415 FEEALAVPCTIVDLSKNKLLEIPSGTWLLCKTLNDLNISCNQLQEIPAE----------- 463

Query: 260 LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
                     ++ C L L  L++S+N++  LP E    T LR+L ++ N          N
Sbjct: 464 ----------IKTC-LNLRYLNISHNNIKELPDEFAACTRLRELDISFNSF--------N 504

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
            P   + K+                 E L+    ++S    E   E +NL  +       
Sbjct: 505 QPPMCVYKF--------------PALEILLLGNNKISFIDAE---ELLNLKML------- 540

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQ 406
              T LDL+ N++ E+PP +     L+
Sbjct: 541 ---THLDLTNNNLTEIPPLIGKMTQLR 564



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 15/193 (7%)

Query: 7   AARTSGSLNLSNRSLRDVPNEVY--------------KNFDEAGEGDKWWEAVDLQKLIL 52
           A R S +LNLSN+SL +V   V+              KN         W     L  L +
Sbjct: 393 AMRCSKALNLSNKSLCNVSKAVFEEALAVPCTIVDLSKNKLLEIPSGTWLLCKTLNDLNI 452

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           + N ++++  +++    L  LN+SHN + ELP        L+ LD+SFNS  + P  +  
Sbjct: 453 SCNQLQEIPAEIKTCLNLRYLNISHNNIKELPDEFAACTRLRELDISFNSFNQPPMCVYK 512

Query: 113 ATALVKFDCSSNQLKELPS-SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
             AL      +N++  + +  L     L+    +NN +T +P  +   +++  L +EGN 
Sbjct: 513 FPALEILLLGNNKISFIDAEELLNLKMLTHLDLTNNNLTEIPPLIGKMTQLRTLKLEGNP 572

Query: 172 LTVLSNNLIASWT 184
           L VL   +IA  T
Sbjct: 573 LRVLRPAIIAKGT 585


>gi|24216020|ref|NP_713501.1| hypothetical protein LA_3321 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075101|ref|YP_005989420.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|24197248|gb|AAN50519.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458892|gb|AER03437.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
          Length = 452

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 191/358 (53%), Gaps = 19/358 (5%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L +  +  L +++  L  L  L++S N L+ LP  IG+L  L+ LD+SFNS+  +P E+G
Sbjct: 55  LRYQKLTTLPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVG 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L + D   N+L  LP  +G+  NL +   ++N +T+LP+++     + +LD+  NK
Sbjct: 115 QLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNK 174

Query: 172 LTVLSNNLIASWTMLT-ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           LT L   +     + T  LI ++  L  +P+ IG L  L  L+L  N++ ++P  I    
Sbjct: 175 LTTLPKEIGQLQNLKTLNLIVTQ--LTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 232

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L    +  N ++ALP E+G+L  L  LDLH NQL     E  QL+ L  LDL  N L+ 
Sbjct: 233 NLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTT 292

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDL 348
           LP EIG++  L++L L  N L TL         P  ++ L++ R+ + ++++ +T  +++
Sbjct: 293 LPKEIGQLQNLQELCLDENQLTTL---------PKEIEQLQNLRVLDLDNNQLTTLPKEV 343

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           + + + L V    L+L    LS +P EI +   +  L L  N +  LP E+    +LQ
Sbjct: 344 LRLQS-LQV----LALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQ 396



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 159/337 (47%), Gaps = 38/337 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++ + KL+ LP  IG+L  L+ LD+SFNS+  +P EIG    L + D S N L  LP 
Sbjct: 52  TLDLRYQKLTTLPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N + +LP ++     + +LD+  NKLT L    I     L EL  
Sbjct: 112 EVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKE-IRQLRNLQELDL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N L  +P+ IG L  L  L+L   ++ ++P  I    +L    + +N L+ LP E+G+
Sbjct: 171 NSNKLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGE 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L  N++     E  QL+ L  LDL  N L+ LP EIG++  L++L L  N L
Sbjct: 231 LQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQL 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL         P  +  L++                            +EL L+   L+
Sbjct: 291 TTL---------PKEIGQLQN---------------------------LQELCLDENQLT 314

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +P EI +   +  LDL  N +  LP E+    SLQV
Sbjct: 315 TLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQV 351



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/269 (35%), Positives = 137/269 (50%), Gaps = 25/269 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++R L  L  L+++ NKL+ LP  IG+L  LK+L++    +  
Sbjct: 141 NLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLTTLPKEIGQLQNLKTLNLIVTQLTT 200

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +   NQL  LP  +G   NL       N IT+LP+++     +  L
Sbjct: 201 LPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWL 260

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L                        P+ IG L  L RLDLHQN++ ++P  
Sbjct: 261 DLHQNQLTTL------------------------PKEIGQLQNLQRLDLHQNQLTTLPKE 296

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E  +  N L+ LP E+ +L  L  LDL +NQL     E  +L+ L VL L +
Sbjct: 297 IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGS 356

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N LS LP EIG++  L+ L L  N L TL
Sbjct: 357 NRLSTLPKEIGQLQNLQVLGLISNQLTTL 385



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 178/362 (49%), Gaps = 15/362 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N++  L +++  L  L  L++S N L+ LP  +G+L  L+ LD+  N +  
Sbjct: 72  NLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLAT 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L + D +SN+L  LP  + +  NL +   ++N +T+LP+++     +  L
Sbjct: 132 LPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLTTLPKEIGQLQNLKTL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++   +LT L    I     L  L    N L  +P+ IG L  L  L L +NRI ++P  
Sbjct: 192 NLIVTQLTTLPKE-IGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKE 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +  N L+ LP E+G+L  L  LDLH NQL     E  QL+ L  L L  
Sbjct: 251 IGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EI ++  LR L L  N L TL   ++   +  +L    +RL       ++  
Sbjct: 311 NQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRL-------STLP 363

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
           KE  I     L V    L L    L+ +P EI +   + +L L  N +   P E+    +
Sbjct: 364 KE--IGQLQNLQV----LGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKN 417

Query: 405 LQ 406
           LQ
Sbjct: 418 LQ 419



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 137/266 (51%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L  LN+   +L+ LP  IGEL  LK+L++  N +  
Sbjct: 164 NLQELDLNSNKLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTT 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N++  LP  +G+  NL       N +T+LP+++     + +L
Sbjct: 224 LPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L    I     L EL   +N L  +P+ I  L  L  LDL  N++ ++P  
Sbjct: 284 DLHQNQLTTLPKE-IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKE 342

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +    SL    +G+N LS LP E+G+L  L  L L SNQL     E  QL+ L  L L  
Sbjct: 343 VLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDE 402

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+  P EI ++  L++L L  NPL
Sbjct: 403 NQLTTFPKEIRQLKNLQELHLYLNPL 428



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 1/223 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L+ L L  N +  L +++  L  L +L +  N+++ LP  IG+L  L+ LD+  N 
Sbjct: 207 ELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQ 266

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG    L + D   NQL  LP  +G+  NL +     N +T+LP+++     +
Sbjct: 267 LTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD++ N+LT L   ++   + L  L    N L+ +P+ IG L  L  L L  N++ ++
Sbjct: 327 RVLDLDNNQLTTLPKEVLRLQS-LQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTL 385

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           P  I    +L E  +  N L+  P E+ +L  L  L L+ N L
Sbjct: 386 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 428



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L VL++ +N+L+ LP  +  L  L+ L +  N +  
Sbjct: 302 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 361

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP  +G+  NL +     N +T+ P+++     + +L
Sbjct: 362 LPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQEL 421

Query: 166 DVEGNKLT 173
            +  N L+
Sbjct: 422 HLYLNPLS 429



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L VL +  N+LS LP  IG+L  L+ L +  N +  
Sbjct: 325 NLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTT 384

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 385 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430


>gi|255082906|ref|XP_002504439.1| predicted protein [Micromonas sp. RCC299]
 gi|226519707|gb|ACO65697.1| predicted protein [Micromonas sp. RCC299]
          Length = 522

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 179/340 (52%), Gaps = 21/340 (6%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +PA +G L  L+ LD++ N +  +P EIG  T+LVKF    N+L  +P+ +G+  +L   
Sbjct: 199 VPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIGQLTSLQWL 258

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             S+N + S+P D+   + +  L + GN+LT +    I   T L  L    N L  +P  
Sbjct: 259 DLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAE-IWQLTSLKVLGLRGNQLTSVPAE 317

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L+ L  L+L+ N++ S+P+ I    SL   ++G N L+++PAE+G+L+ L  L+L++
Sbjct: 318 IGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNLNN 377

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL     E  QL  L  L L  N L+ +P EIG++T+L+ L L GN L ++        
Sbjct: 378 NQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSV-------- 429

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLEGMNLSAIPSEIWEA 379
            PA +  L +       +E S  +  L ++   +    T KEL L    L+++P+EI + 
Sbjct: 430 -PAEIGQLTAL------TELSLQRNKLKSVPAEIGQLATLKELWLNDNLLTSVPAEIGQL 482

Query: 380 GEITKLDLSRNSIQELPPELSS--CASLQVKFSDLVTNKE 417
             +T L+L RN +  +P  +     A   V+  D +T  E
Sbjct: 483 RALTSLNLDRNRLTSVPAAIRELRAAGFYVQLDDGLTVDE 522



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 144/263 (54%), Gaps = 2/263 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N +  +  ++  L  L    +  N+L+ +PA IG+L  L+ LD+S N +  +
Sbjct: 209 LRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIGQLTSLQWLDLSDNRLASV 268

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P +IG  T+L     + NQL  +P+ + +  +L       N +TS+P ++   + +S+L+
Sbjct: 269 PADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGNQLTSVPAEIGQLTSLSELN 328

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT +    I   T L  L    N L  +P  IG L+ L  L+L+ N++ S+P+ I
Sbjct: 329 LNNNQLTSVPAE-IWQLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNLNNNQLTSVPAEI 387

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL   ++G N L+++PAE+G+L+ L  L L+ NQL     E  QL  L+ L L  N
Sbjct: 388 WQLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSVPAEIGQLTALTELSLQRN 447

Query: 286 SLSGLPPEIGKMTTLRKLLLTGN 308
            L  +P EIG++ TL++L L  N
Sbjct: 448 KLKSVPAEIGQLATLKELWLNDN 470



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 36/183 (19%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+N  L  VP E+             W+   L+ L L  N +  +  ++  L  L+ L
Sbjct: 327 LNLNNNQLTSVPAEI-------------WQLTSLRGLFLGGNRLTSVPAEIGRLTSLSEL 373

Query: 74  NVSHN-----------------------KLSELPAAIGELHMLKSLDVSFNSIMKIPDEI 110
           N+++N                       +L+ +PA IG L  LK L +  N +  +P EI
Sbjct: 374 NLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYGNQLTSVPAEI 433

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           G  TAL +     N+LK +P+ +G+   L +   ++N +TS+P ++     ++ L+++ N
Sbjct: 434 GQLTALTELSLQRNKLKSVPAEIGQLATLKELWLNDNLLTSVPAEIGQLRALTSLNLDRN 493

Query: 171 KLT 173
           +LT
Sbjct: 494 RLT 496


>gi|28261021|gb|AAO32794.1| scribbled [Drosophila melanogaster]
          Length = 1200

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 115/324 (35%), Positives = 172/324 (53%), Gaps = 20/324 (6%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLKELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNK-----LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL 116
            D++N   L  L+VS N      L+ LPA  G L  L+SL++  N +  +P+ I   T L
Sbjct: 77  PDIQNFENLVELDVSRNDIPDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 136

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
            + D   N++++LP  LG    L +    +N +  LP +L   +K++ LDV  N+L  L 
Sbjct: 137 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 196

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           N  I+    LT+L  ++NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  
Sbjct: 197 NE-ISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELI 255

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N LS LPA +G+++KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G
Sbjct: 256 LTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELG 315

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVN 319
             T L  L ++GN L  L  SLVN
Sbjct: 316 NCTVLHVLDVSGNQLLYLPYSLVN 339



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 113 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 172

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 173 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 232

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 233 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 291

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 292 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 350



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 157/312 (50%), Gaps = 19/312 (6%)

Query: 102 SIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           S+ ++P+EI   +  L +    +N +++LP +  R   L     S+N I  LP D+ +  
Sbjct: 24  SLPQVPEEILRYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFE 83

Query: 161 KMSKLDVEGNKLTVLS-NNLIASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQ 216
            + +LDV  N +  +S   L A +  LT+L +    +NLL  +PETI  L++L RLDL  
Sbjct: 84  NLVELDVSRNDIPDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGD 143

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 275
           N I  +P  +     L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L 
Sbjct: 144 NEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLV 203

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L+ LDL+ N L  LP  I K++ L  L L  N L+ L  +L N      L      L E
Sbjct: 204 SLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELI-----LTE 258

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           N  SE   +    I   T+L+     L+++   L  +P EI +   +  L L  N +++L
Sbjct: 259 NFLSELPAS----IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKL 310

Query: 396 PPELSSCASLQV 407
           PPEL +C  L V
Sbjct: 311 PPELGNCTVLHV 322



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 185 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 231

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 232 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 291

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 292 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 349

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 350 -NQSQPLLTFQPDT 362


>gi|195109404|ref|XP_001999277.1| GI24424 [Drosophila mojavensis]
 gi|193915871|gb|EDW14738.1| GI24424 [Drosophila mojavensis]
          Length = 694

 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 216/455 (47%), Gaps = 56/455 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEA--------------GEGDKWWEAVDL 47
           D + K AR +G+LNL+N+ +  VP  ++ N +EA               E D WW  V L
Sbjct: 104 DTLWKLARKTGTLNLTNKGMARVPERLF-NINEADADTKKRTLEQLSINEEDAWWNQVPL 162

Query: 48  QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP 107
             L L+ N +  +   + NL  LTVL +  N L ELP  IG+L  L  L++S N + ++P
Sbjct: 163 NNLDLSSNALTHISPKIENLLTLTVLQLHDNALVELPPQIGKLEKLVRLNLSHNKLKELP 222

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
            ++ S   L   + S N+ +EL   +     L    A NN I SLP  +    +++ L +
Sbjct: 223 PDLYSLPELRHLNISHNEFEELNPDISNLHMLEFLDAGNNNINSLPGGIGFLVRLTALLL 282

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
             N +  L  +++   + L +L   KN L  +PE +G L +L  L +  N I  +P +  
Sbjct: 283 ANNHIKELPPDIVYMRS-LQKLDLMKNDLVALPEDMGLLRKLQFLYVQHNDIKELP-NFE 340

Query: 228 GCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
           G   L+E +  NN +  +P EL + L  L  LDL  N++ +   E C LR L+ LD++NN
Sbjct: 341 GNEMLSELHASNNYIDHVPKELCENLPHLKILDLRDNKITQLPDEVCLLRNLNRLDITNN 400

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           S+S LP  +  +  L  L + GNP++T+R  ++   T  +LK L  R    E ++     
Sbjct: 401 SISVLPVTLSTLAHLISLQVDGNPIKTIRRDILQCGTARILKTLHDRAQAKERADGGA-- 458

Query: 346 EDL----------------------ITMATRLSVTSK-ELSLEGMNLSAIPSEIWEAG-- 380
           EDL                      +T   +L  T    ++LEG  L+ +P+ ++E    
Sbjct: 459 EDLPCSSSAAGSQLSMQQQQQLPANMTDKYKLRHTRTLAVNLEG--LTDVPTHVFELASE 516

Query: 381 -EITKLDLSRNSIQELPPELSSCASLQVKFSDLVT 414
            ++  +D +RN +  LP  L          SDLVT
Sbjct: 517 EKVHVVDFARNHLSTLPKGLQ-------HMSDLVT 544



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 160/359 (44%), Gaps = 51/359 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ SN  +  VP E+ +N               L+ L L  N I +L +++  L  L  L
Sbjct: 348 LHASNNYIDHVPKELCENLPH------------LKILDLRDNKITQLPDEVCLLRNLNRL 395

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI---GSATALVKFDCSSNQLKE-- 128
           ++++N +S LP  +  L  L SL V  N I  I  +I   G+A  L      + Q KE  
Sbjct: 396 DITNNSISVLPVTLSTLAHLISLQVDGNPIKTIRRDILQCGTARILKTLHDRA-QAKERA 454

Query: 129 ------LPSSLGRC-------------LNLSD-FKASNN--------CITSLPE---DLA 157
                 LP S                  N++D +K  +          +T +P    +LA
Sbjct: 455 DGGAEDLPCSSSAAGSQLSMQQQQQLPANMTDKYKLRHTRTLAVNLEGLTDVPTHVFELA 514

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
              K+  +D   N L+ L   L     ++TEL+ S N++N +P  I   +R+  L+L  N
Sbjct: 515 SEEKVHVVDFARNHLSTLPKGLQHMSDLVTELVLSHNVINNVPPFISQFTRITFLNLSNN 574

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--L 275
            I  +P       +L E  + NN   ALP  L +L  L  L    NQ+K   V   Q   
Sbjct: 575 LIKDLPPEFGLLNTLRELNIANNRFEALPNALYELQGLEILIASDNQIKAINVAGLQNLP 634

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           RLS LDL NN++  +PP +G +T +  L L GNP R  R  ++   T +++ YLR R+P
Sbjct: 635 RLSTLDLRNNNIEYVPPTLGNLTNITHLELVGNPFRQPRHQILMKGTDSIMSYLRDRIP 693



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 164/396 (41%), Gaps = 73/396 (18%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQKL L  N++  L ED+  L  L  L V HN + ELP   G   ML  L  S N I  +
Sbjct: 300 LQKLDLMKNDLVALPEDMGLLRKLQFLYVQHNDIKELPNFEGN-EMLSELHASNNYIDHV 358

Query: 107 PDEIGSATALVK-FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P E+      +K  D   N++ +LP  +    NL+    +NN I+ LP  L+  + +  L
Sbjct: 359 PKELCENLPHLKILDLRDNKITQLPDEVCLLRNLNRLDITNNSISVLPVTLSTLAHLISL 418

Query: 166 DVEGNKLTVLSNNLIASWT-----MLTELIASKNLLNGMPETIGSLSRLI---------- 210
            V+GN +  +  +++   T      L +   +K   +G  E +   S             
Sbjct: 419 QVDGNPIKTIRRDILQCGTARILKTLHDRAQAKERADGGAEDLPCSSSAAGSQLSMQQQQ 478

Query: 211 --------RLDLHQNRILSI--------PSSISGCCSLAEFYM---GNNALSALPAELGK 251
                   +  L   R L++        P+ +    S  + ++     N LS LP  L  
Sbjct: 479 QLPANMTDKYKLRHTRTLAVNLEGLTDVPTHVFELASEEKVHVVDFARNHLSTLPKGLQH 538

Query: 252 LSKLGT-LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +S L T L L  N +        Q  R++ L+LSNN +  LPPE G + TLR+L +  N 
Sbjct: 539 MSDLVTELVLSHNVINNVPPFISQFTRITFLNLSNNLIKDLPPEFGLLNTLRELNIANNR 598

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
              L ++L        L+ L                E LI    ++    K +++ G  L
Sbjct: 599 FEALPNALYE------LQGL----------------EILIASDNQI----KAINVAG--L 630

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             +P        ++ LDL  N+I+ +PP L +  ++
Sbjct: 631 QNLP-------RLSTLDLRNNNIEYVPPTLGNLTNI 659


>gi|434388059|ref|YP_007098670.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
 gi|428019049|gb|AFY95143.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
          Length = 993

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 196/388 (50%), Gaps = 29/388 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL    + ++P  + K                L  L L  N I  + E + NL  LT 
Sbjct: 214 SLNLGENQIAELPQMIGK-------------LTSLTSLKLWSNQIAIIPEAIGNLTSLTA 260

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S N+++ +P AIG L  L SLD+SFN I ++P  IG+ T+L      +NQ+ ELP +
Sbjct: 261 LGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRNNQIAELPQT 320

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   +L++     N I  LP+ + + + ++ L +  N++  L    I + T LT L  S
Sbjct: 321 IGNLTSLTNLFLGRNKIAELPQTIGNLTSLTSLYLSNNQIAELPQT-IGNLTSLTSLDLS 379

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N +  +P+TIG+L+ L  L+L+ N+I  +P +I    SL   ++ NN ++ LP  +G L
Sbjct: 380 FNQIAELPQTIGNLTSLTSLNLYNNQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGNL 439

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           + L +L+L SNQ+ E       L  L+ LDLS N ++ LP  IG +T+L  L L+ N + 
Sbjct: 440 TSLTSLNLWSNQIAELPQTIGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIA 499

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L  ++ N  + + L      L  N+ +E   T  +L ++         +L L    ++ 
Sbjct: 500 ELLQTIGNLTSLSDLD-----LSNNQIAELPQTIGNLTSLT--------DLKLYNNQIAV 546

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPEL 399
           IP        + KLDL  N +  +PPE+
Sbjct: 547 IPEWFRSLNNLEKLDLRGNPV-PIPPEI 573



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 188/361 (52%), Gaps = 15/361 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL L  N++ +L E +  L  L  L +  NKL+E+P AIG+L  L SL++  N I +
Sbjct: 165 NLKKLSLGGNSLSQLPESIALLTELEELYIWENKLTEIPQAIGKLTSLTSLNLGENQIAE 224

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG  T+L      SNQ+  +P ++G   +L+    S+N I  +PE + + + ++ L
Sbjct: 225 LPQMIGKLTSLTSLKLWSNQIAIIPEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSL 284

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N++  L    I + T LT L    N +  +P+TIG+L+ L  L L +N+I  +P +
Sbjct: 285 DLSFNQIAELPQT-IGNLTSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQT 343

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    SL   Y+ NN ++ LP  +G L+ L +LDL  NQ+ E       L  L+ L+L N
Sbjct: 344 IGNLTSLTSLYLSNNQIAELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLNLYN 403

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N ++ LP  IG +T+L  L L+ N +  L  ++ N     L       L  N+ +E   T
Sbjct: 404 NQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGN-----LTSLTSLNLWSNQIAELPQT 458

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
             +L       S+TS +LS     ++ +P  I     +T L+LS N I EL   + +  S
Sbjct: 459 IGNLT------SLTSLDLSFN--QIAELPQMIGNLTSLTNLNLSFNQIAELLQTIGNLTS 510

Query: 405 L 405
           L
Sbjct: 511 L 511



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 187/389 (48%), Gaps = 37/389 (9%)

Query: 41  WW-EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           W+ E   L +L L ++ + ++ E + +L  LT L  S N L  LP +I  L  LK L + 
Sbjct: 113 WFSEMTRLTELGLGNSGLAEIPELVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLG 172

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            NS+ ++P+ I   T L +     N+L E+P ++G+  +L+      N I  LP+ +   
Sbjct: 173 GNSLSQLPESIALLTELEELYIWENKLTEIPQAIGKLTSLTSLNLGENQIAELPQMIGKL 232

Query: 160 SKMSKLDVEGNKLTV---------------LSNNLIA-------SWTMLTELIASKNLLN 197
           + ++ L +  N++ +               LS+N IA       + T LT L  S N + 
Sbjct: 233 TSLTSLKLWSNQIAIIPEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIA 292

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +P+TIG+L+ L  L L  N+I  +P +I    SL   ++G N ++ LP  +G L+ L +
Sbjct: 293 ELPQTIGNLTSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGNLTSLTS 352

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L L +NQ+ E       L  L+ LDLS N ++ LP  IG +T+L  L L  N +  L  +
Sbjct: 353 LYLSNNQIAELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLNLYNNQIAELPQT 412

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           + N     L       L  N+ +E   T  +L ++ +        L+L    ++ +P  I
Sbjct: 413 IGN-----LTSLTNLFLSNNQIAELPQTIGNLTSLTS--------LNLWSNQIAELPQTI 459

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASL 405
                +T LDLS N I ELP  + +  SL
Sbjct: 460 GNLTSLTSLDLSFNQIAELPQMIGNLTSL 488



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 171/364 (46%), Gaps = 15/364 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L +  N I+ L + L  +  LT L +  NK+  LP    E+  L  L +  + + +I
Sbjct: 74  LTSLDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGLAEI 133

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ + S T L     S N L+ LP S+    NL       N ++ LPE +A  +++ +L 
Sbjct: 134 PELVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELY 193

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NKLT +    I   T LT L   +N +  +P+ IG L+ L  L L  N+I  IP +I
Sbjct: 194 IWENKLTEIP-QAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAI 252

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL    + +N ++ +P  +G L+ L +LDL  NQ+ E       L  L+ L L NN
Sbjct: 253 GNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRNN 312

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            ++ LP  IG +T+L  L L  N +  L  ++ N     L       L  N+ +E   T 
Sbjct: 313 QIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGN-----LTSLTSLYLSNNQIAELPQTI 367

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            +L       S+TS +LS     ++ +P  I     +T L+L  N I ELP  + +  SL
Sbjct: 368 GNLT------SLTSLDLSFN--QIAELPQTIGNLTSLTSLNLYNNQIAELPQTIGNLTSL 419

Query: 406 QVKF 409
              F
Sbjct: 420 TNLF 423



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 162/340 (47%), Gaps = 15/340 (4%)

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           LP LT L+V  NK+  LP  + ++  L  L +  N I  +P+     T L +    ++ L
Sbjct: 71  LPKLTSLDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGL 130

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
            E+P  +    NL+    S N +  LPE +++   + KL + GN L+ L  + IA  T L
Sbjct: 131 AEIPELVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPES-IALLTEL 189

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
            EL   +N L  +P+ IG L+ L  L+L +N+I  +P  I    SL    + +N ++ +P
Sbjct: 190 EELYIWENKLTEIPQAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIP 249

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
             +G L+ L  L L SNQ+         L  L+ LDLS N ++ LP  IG +T+L  L L
Sbjct: 250 EAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSL 309

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N +  L  ++ N     L       L  N+ +E   T  +L ++ +        L L 
Sbjct: 310 RNNQIAELPQTIGN-----LTSLTNLFLGRNKIAELPQTIGNLTSLTS--------LYLS 356

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              ++ +P  I     +T LDLS N I ELP  + +  SL
Sbjct: 357 NNQIAELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSL 396



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 126/243 (51%), Gaps = 14/243 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL LSN  + ++P  +         G+       L  L L+ N I +L + + NL  LT 
Sbjct: 352 SLYLSNNQIAELPQTI---------GN----LTSLTSLDLSFNQIAELPQTIGNLTSLTS 398

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+ +N+++ELP  IG L  L +L +S N I ++P  IG+ T+L   +  SNQ+ ELP +
Sbjct: 399 LNLYNNQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIAELPQT 458

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   +L+    S N I  LP+ + + + ++ L++  N++  L    I + T L++L  S
Sbjct: 459 IGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIAELLQT-IGNLTSLSDLDLS 517

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N +  +P+TIG+L+ L  L L+ N+I  IP       +L +  +  N +   P  LG  
Sbjct: 518 NNQIAELPQTIGNLTSLTDLKLYNNQIAVIPEWFRSLNNLEKLDLRGNPVPIPPEILGTN 577

Query: 253 SKL 255
            K 
Sbjct: 578 KKF 580



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 157/345 (45%), Gaps = 46/345 (13%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKF----------DCSSNQLKELPSSLGRCLNLSDFK 143
           K LD++  ++ ++P EIG  T L K               N L E+P  +     L+   
Sbjct: 19  KELDLAGMNLTELPPEIGKLTHLEKLILGKWDDKTGKAIGNLLTEIPPVILSLPKLTSLD 78

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN----------------------NLIA 181
              N I SLP+ LA  + ++KL + GNK+  L N                       L+ 
Sbjct: 79  VWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGLAEIPELVF 138

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           S T LT L  S+N L  +PE+I +L  L +L L  N +  +P SI+    L E Y+  N 
Sbjct: 139 SLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELYIWENK 198

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L+ +P  +GKL+ L +L+L  NQ+ E      +L  L+ L L +N ++ +P  IG +T+L
Sbjct: 199 LTEIPQAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAIGNLTSL 258

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
             L L+ N +  +  ++ N     L       L  N+ +E   T  +L ++ +       
Sbjct: 259 TALGLSSNQIAIIPEAIGN-----LTSLTSLDLSFNQIAELPQTIGNLTSLTS------- 306

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            LSL    ++ +P  I     +T L L RN I ELP  + +  SL
Sbjct: 307 -LSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGNLTSL 350



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 113/233 (48%), Gaps = 40/233 (17%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL N  + ++P  +         G+       L  L L++N I +L + + NL  LT 
Sbjct: 398 SLNLYNNQIAELPQTI---------GN----LTSLTNLFLSNNQIAELPQTIGNLTSLTS 444

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+++ELP  IG L  L SLD+SFN I ++P  IG+ T+L   + S NQ+ EL  +
Sbjct: 445 LNLWSNQIAELPQTIGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIAELLQT 504

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   +LSD   SNN I  LP+ + + + ++ L +  N++ V                  
Sbjct: 505 IGNLTSLSDLDLSNNQIAELPQTIGNLTSLTDLKLYNNQIAV------------------ 546

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
                 +PE   SL+ L +LDL  N +  IP  I G     +FY     L A+
Sbjct: 547 ------IPEWFRSLNNLEKLDLRGNPV-PIPPEILGTNK--KFYEDPGDLQAI 590



 Score = 42.0 bits (97), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 28/171 (16%)

Query: 260 LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL----------TGNP 309
           + + +  E    A + +   LDL+  +L+ LPPEIGK+T L KL+L           GN 
Sbjct: 1   MEAQEFLELIDRAAEEQWKELDLAGMNLTELPPEIGKLTHLEKLILGKWDDKTGKAIGNL 60

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK--------------EDLITMATRL 355
           L  +   +++ P    L    +++    D  A  T                +  +  TRL
Sbjct: 61  LTEIPPVILSLPKLTSLDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRL 120

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +    EL L    L+ IP  ++    +T L  S N++Q LP  +S+  +L+
Sbjct: 121 T----ELGLGNSGLAEIPELVFSLTNLTYLGFSENNLQVLPESISNLKNLK 167


>gi|410967549|ref|XP_003990281.1| PREDICTED: leucine-rich repeat-containing protein 40 [Felis catus]
          Length = 592

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 137/443 (30%), Positives = 217/443 (48%), Gaps = 43/443 (9%)

Query: 4   ILKAARTSGSLNLSNRSL-------------RDVPNEVYKNFDEAGEGDKWWEAVDLQKL 50
           +LKAAR SG LNLS R+L             R   N     F +    D     +D +  
Sbjct: 31  LLKAARKSGQLNLSGRNLSEDGGLLELILLSRSSKNNGTLYFPDRVLSDTHI-LLDFKST 89

Query: 51  IL-AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           IL  ++N+             T+  +  N+L+ LP+AI EL  L+ L+VS N +  +P E
Sbjct: 90  ILFMYSNV-------------TMTQIHDNQLTSLPSAIRELENLQKLNVSHNKLQILPKE 136

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           I +   L       N+L  +P    +  NL D   SNN +T++P      S + +L++  
Sbjct: 137 ITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLTTVPASFCSLSSLVRLNLSS 196

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+L  L    I+    L  L  + N L  +P  + ++  L  L L +N++  +P     C
Sbjct: 197 NQLKSLPAE-ISGMKRLKHLDCNSNFLETVPPELANMESLELLYLRRNKLRFLP-EFPSC 254

Query: 230 CSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             L E ++G N +  L P  L  L+ +  LDL  N+LK    E   L+ L  LDLSNN +
Sbjct: 255 RLLKELHVGENQIEMLGPEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDI 314

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           S LP  +GK+  L+ L L GNPLRT+R  ++N  T  +LKYLRS++ ++E S++    E 
Sbjct: 315 SSLPCSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDEPSQSDPVTET 373

Query: 348 LITMA--TRLS----VTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPE 398
            +T+   +R++    VT K L       + IP E+++A +   +T ++ S+N + E+P  
Sbjct: 374 AMTLPSESRVNVHAIVTLKILDYSDKQTTLIPDEVFDAVKSNIVTSVNFSKNQLCEIPKR 433

Query: 399 LSSCASLQVKFSDLVTNKESCIS 421
           +     + V   +L  N+ S IS
Sbjct: 434 IVELKEM-VSDVNLSFNRLSSIS 455



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 151/307 (49%), Gaps = 25/307 (8%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI- 110
           L  N ++ + +++  L  L  L++S+N +S LP ++G+LH LK L +  N +  I  EI 
Sbjct: 286 LRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKLH-LKFLALEGNPLRTIRREII 344

Query: 111 --GSATAL------VKFD--CSSNQLKE----LPS----SLGRCLNLSDFKASNNCITSL 152
             G+   L      +K D    S+ + E    LPS    ++   + L     S+   T +
Sbjct: 345 NKGTQEVLKYLRSKIKDDEPSQSDPVTETAMTLPSESRVNVHAIVTLKILDYSDKQTTLI 404

Query: 153 PEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           P+++ D  K   ++ ++   N+L  +   ++    M++++  S N L+ +   +  L +L
Sbjct: 405 PDEVFDAVKSNIVTSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNRLSSISLDLCMLQKL 464

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
             LDL  N + S+P  +     L    +  N    LP  L  +  L T+ + +NQ+    
Sbjct: 465 TFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEVLYHIPTLETILISNNQVGSVD 524

Query: 270 VEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
            +  +   +L  LDL NN L  +PPE+G    LR LLL GNP R  R++++   T A+L+
Sbjct: 525 PQKMKAMEKLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILE 584

Query: 328 YLRSRLP 334
           YLR R+P
Sbjct: 585 YLRDRIP 591



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 171/422 (40%), Gaps = 74/422 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L+ +P E+         G K  + +D        N +E +  +L N+  L +L
Sbjct: 192 LNLSSNQLKSLPAEI--------SGMKRLKHLDCNS-----NFLETVPPELANMESLELL 238

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSI-MKIPDEIGSATALVKFDCSSNQLKELPSS 132
            +  NKL  LP       +LK L V  N I M  P+ +    +++  D   N+LK +P  
Sbjct: 239 YLRRNKLRFLPE-FPSCRLLKELHVGENQIEMLGPEHLKHLNSILVLDLRDNKLKSVPDE 297

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +    +L     SNN I+SLP  L     +  L +EGN L  +   +I   T        
Sbjct: 298 ITLLQSLERLDLSNNDISSLPCSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLR 356

Query: 193 KNLLNGMP-------ETIGSLSRLIRLDLHQNRILSI-----------PSSISGCCS--- 231
             + +  P       ET  +L    R+++H    L I           P  +        
Sbjct: 357 SKIKDDEPSQSDPVTETAMTLPSESRVNVHAIVTLKILDYSDKQTTLIPDEVFDAVKSNI 416

Query: 232 LAEFYMGNNALSALPAELGKLSKL-GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +       N L  +P  + +L ++   ++L  N+L    ++ C L +L+ LDL NN L+ 
Sbjct: 417 VTSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNRLSSISLDLCMLQKLTFLDLRNNFLNS 476

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP E+  +  L+ + L+ N  + L   L + PT                           
Sbjct: 477 LPEEMESLIRLQTINLSFNRFKILPEVLYHIPT--------------------------- 509

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + T L +++ ++       S  P ++    ++  LDL  N + ++PPEL +C +L+   
Sbjct: 510 -LETIL-ISNNQVG------SVDPQKMKAMEKLITLDLQNNDLLQIPPELGNCVNLRTLL 561

Query: 410 SD 411
            D
Sbjct: 562 LD 563


>gi|421094655|ref|ZP_15555371.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362717|gb|EKP13754.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891510|gb|EMG02221.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 422

 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 190/370 (51%), Gaps = 39/370 (10%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L +L L+ N ++ L +++  L  +  L++S+N+L+ LP  IG+L  L+ LD++ N 
Sbjct: 61  ELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNL 120

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P +IG    L +   ++NQLK LP  +G+  NL +    NN + +LP+D+     +
Sbjct: 121 LTTLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQNL 180

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            +L+++GN+L  L  + I     LTEL  + N L  +P+ IG+L  L  L L  N + ++
Sbjct: 181 RELNLDGNQLKTLPKD-IGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTL 239

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P  I    +L   Y+G   L+ LP ++G L  L  L+L  NQ+     +  QL+ L VL 
Sbjct: 240 PKEIGKLKNLQVLYLGA-LLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLY 298

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           LS N L+ LP EIG++  LR+L L+GN + TL         P  +  L+S          
Sbjct: 299 LSENQLATLPKEIGQLQNLRELDLSGNQITTL---------PKDIGELQSL--------- 340

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                             +EL+L G  ++ +P EI +   + +L+L  N I  +P E+  
Sbjct: 341 ------------------RELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEIGH 382

Query: 402 CASLQVKFSD 411
             +LQV + D
Sbjct: 383 LKNLQVLYLD 392



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 36/269 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+N  L+ +P ++              +  +L++L L +N ++ L +D+  L  L  L
Sbjct: 137 LYLTNNQLKTLPKDI-------------GQLQNLRELYLDNNQLKTLPKDIGQLQNLREL 183

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+L  LP  IG+L  L  L+++ N +  +P +IG+   L +    +N+L  LP  +
Sbjct: 184 NLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEI 243

Query: 134 GRCLNLS----------------------DFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           G+  NL                       +   S N IT+LP+D+     +  L +  N+
Sbjct: 244 GKLKNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQ 303

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L  L    I     L EL  S N +  +P+ IG L  L  L+L  N+I ++P  I    S
Sbjct: 304 LATLPKE-IGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNQITTLPKEIGKLQS 362

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDL 260
           L E  +G N ++ +P E+G L  L  L L
Sbjct: 363 LRELNLGGNQITTIPKEIGHLKNLQVLYL 391


>gi|359683883|ref|ZP_09253884.1| lipoprotein, partial [Leptospira santarosai str. 2000030832]
          Length = 332

 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/274 (35%), Positives = 144/274 (52%), Gaps = 2/274 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L + +N +  L +++  L  L  LN+ +N+L  LP  IG L  L+ L ++ N +  
Sbjct: 21  NLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGTLQKLEWLYLTNNQLAT 80

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L     ++NQL+ LP  +G+  NL +    NN + S P+++   S + +L
Sbjct: 81  LPKEIGKLQRLEWLGLTNNQLRILPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRL 140

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +E N+ T L    I +   L  L    N L  +P+ IG L RL  L+L+ NR+ ++P  
Sbjct: 141 HLEYNRFTTLPKE-IGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKE 199

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I     L   Y+ NN L+ LP E+G+L  L  LDL  NQL     E   L RL  L L N
Sbjct: 200 IGTLQKLQHLYLANNQLATLPQEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKN 259

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           N L  LP EIG++  L+ L L+GNP  T    +V
Sbjct: 260 NQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIV 293



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 155/328 (47%), Gaps = 38/328 (11%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +++N+L+ LP  IG L  L+ L+V  N ++ +P EIG+   L   +  +N+L  LP  
Sbjct: 2   LRLAYNQLTTLPEEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKE 61

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G    L     +NN + +LP+++    ++  L +  N+L +L    I     L ELI  
Sbjct: 62  IGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLTNNQLRILPQE-IGKLQNLKELILE 120

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L   P+ IG+LS L RL L  NR  ++P  I     L    + +N L+ LP E+G+L
Sbjct: 121 NNRLESFPKEIGTLSNLQRLHLEYNRFTTLPKEIGTLHRLPWLNLEHNQLTTLPQEIGRL 180

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            +L  L+L++N+L     E   L +L  L L+NN L+ LP EIG++  L+ L L+ N L 
Sbjct: 181 ERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPQEIGQLQNLKDLDLSDNQLV 240

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL                    PE             I    RL      LSL+   L  
Sbjct: 241 TL--------------------PEE------------IGTLQRLEW----LSLKNNQLRT 264

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPEL 399
           +P EI +   +  LDLS N     P E+
Sbjct: 265 LPQEIGQLQNLKDLDLSGNPFTTFPQEI 292



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 136/292 (46%), Gaps = 18/292 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL N  L  +P E+       G   K      L+ L L +N +  L +++  L  L  
Sbjct: 47  SLNLENNRLVTLPKEI-------GTLQK------LEWLYLTNNQLATLPKEIGKLQRLEW 93

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +++N+L  LP  IG+L  LK L +  N +   P EIG+ + L +     N+   LP  
Sbjct: 94  LGLTNNQLRILPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPKE 153

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G    L      +N +T+LP+++    ++  L++  N+L  L    I +   L  L  +
Sbjct: 154 IGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKE-IGTLQKLQHLYLA 212

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  LDL  N+++++P  I     L    + NN L  LP E+G+L
Sbjct: 213 NNQLATLPQEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLPQEIGQL 272

Query: 253 SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
             L  LDL  N    +  E   L+   +    N    +P  + +  T+RKLL
Sbjct: 273 QNLKDLDLSGNPFTTFPQEIVGLKHLKILKLKN----IPTLLSEQETIRKLL 320



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 125/287 (43%), Gaps = 38/287 (13%)

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            + NQL  LP  +GR  NL D    NN + +LP+++     +  L++E N+L  L    I
Sbjct: 4   LAYNQLTTLPEEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKE-I 62

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            +   L  L  + N L  +P+ IG L RL  L L  N++  +P  I    +L E  + NN
Sbjct: 63  GTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLTNNQLRILPQEIGKLQNLKELILENN 122

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            L + P E+G LS L  L L  N+      E   L RL  L+L +N L+ LP EIG++  
Sbjct: 123 RLESFPKEIGTLSNLQRLHLEYNRFTTLPKEIGTLHRLPWLNLEHNQLTTLPQEIGRLER 182

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L L  N L TL                          E  T ++             
Sbjct: 183 LEWLNLYNNRLATL------------------------PKEIGTLQK------------L 206

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           + L L    L+ +P EI +   +  LDLS N +  LP E+ +   L+
Sbjct: 207 QHLYLANNQLATLPQEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLE 253


>gi|418735840|ref|ZP_13292245.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748568|gb|EKR01467.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 422

 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 190/370 (51%), Gaps = 39/370 (10%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L +L L+ N ++ L +++  L  +  L++S+N+L+ LP  IG+L  L+ LD++ N 
Sbjct: 61  ELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNL 120

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG    L + D ++NQLK LP  +G+  NL +    NN + +LP+D+     +
Sbjct: 121 LTTLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQNL 180

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            +L ++GN+L  L  + I     LTEL  + N L  +P+ IG+L  L  L L  N + ++
Sbjct: 181 RELYLDGNQLKTLPKD-IGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTL 239

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P  I    +L   Y+G   L+ LP ++G L  L  L+L  NQ+     +  QL+ L VL 
Sbjct: 240 PKEIGKLKNLQVSYLG-ALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLY 298

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           LS N L+ LP EIG++  LR+L L+GN + TL         P  +  L+S          
Sbjct: 299 LSENQLATLPKEIGQLQNLRELDLSGNQITTL---------PKDIGELQSL--------- 340

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                             +EL+L G  L+ +P +I +   + +L+L  N I  +P E+  
Sbjct: 341 ------------------RELNLSGNLLTTLPKDIGKLQSLRELNLGGNQITTIPKEIGH 382

Query: 402 CASLQVKFSD 411
             +LQV + D
Sbjct: 383 LKNLQVLYLD 392



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 124/257 (48%), Gaps = 12/257 (4%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           L+L+N  L+ +P ++   +N  E    +   + +        +L++L L  N ++ L +D
Sbjct: 137 LDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKD 196

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  LT LN+++N L+ LP  IG L  L  L +  N +  +P EIG    L +     
Sbjct: 197 IGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNL-QVSYLG 255

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
             L  LP+ +G   +L +   S N IT+LP+D+     +  L +  N+L  L    I   
Sbjct: 256 ALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKE-IGQL 314

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL  S N +  +P+ IG L  L  L+L  N + ++P  I    SL E  +G N ++
Sbjct: 315 QNLRELDLSGNQITTLPKDIGELQSLRELNLSGNLLTTLPKDIGKLQSLRELNLGGNQIT 374

Query: 244 ALPAELGKLSKLGTLDL 260
            +P E+G L  L  L L
Sbjct: 375 TIPKEIGHLKNLQVLYL 391



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 28/173 (16%)

Query: 252 LSKLGTL---------DLHSNQLKEY--CVEACQ--LRLSVLDLSNNSLSGLPPEIGKMT 298
           L K+GTL          L + ++  Y    EA Q    + +L L NN    LP EIG++ 
Sbjct: 6   LQKIGTLILILLCFLSQLKAQEIGTYHNLTEALQNPTDVRILSLHNNE--TLPKEIGELQ 63

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L +L L+ N L+TL   +       L K  R  L  N   + +T  +D+  +       
Sbjct: 64  NLTELYLSSNQLKTLPKEI-----GKLQKIERLSLSNN---QLTTLPKDIGKLKKL---- 111

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
            +EL L    L+ +P EI +   + +LDL+ N ++ LP ++    +L+  + D
Sbjct: 112 -RELDLTNNLLTTLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLD 163


>gi|326923993|ref|XP_003208217.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Meleagris
           gallopavo]
          Length = 582

 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 207/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+                L  L L  N I  +++D++NL  LT+L
Sbjct: 174 LDLRHNKLREIPSVVYR-------------LTSLATLYLRFNRITTVEKDIKNLSKLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P+EIGS T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P+ LA CS++ +L++E N ++ L   L++S   LT L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  + +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPS++     L++    +N + SLP +                     
Sbjct: 103 MRLDLSKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAE--------------------- 141

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
              +     L  L  S+N L  +P+++ +L +L  LDL  N++  IPS +    SLA  Y
Sbjct: 142 ---VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLY 198

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           +  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  LD+++N L  LP EIG
Sbjct: 199 LRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIG 258

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
             T +  L L  N L  L  ++ N  + + L    +RL     S A  ++ D        
Sbjct: 259 SCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELD-------- 310

Query: 356 SVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELP 396
                EL+LE  N+S +P  +  +  ++T L L+RN  Q  P
Sbjct: 311 -----ELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYP 347



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PS++     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    + A L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATL-YL 199

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   ++L++    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSKLTM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ SC   Q+   DL  N+
Sbjct: 247 HNQLEHLPEEIGSCT--QITNLDLQHNE 272


>gi|28261015|gb|AAO32791.1| scribbled [Drosophila melanogaster]
          Length = 1205

 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 115/326 (35%), Positives = 172/326 (52%), Gaps = 22/326 (6%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLKELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNK-------LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
            D++N   L  L+VS N        L+ LPA  G L  L+SL++  N +  +P+ I   T
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLT 136

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L + D   N++++LP  LG    L +    +N +  LP +L   +K++ LDV  N+L  
Sbjct: 137 KLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEE 196

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L N  I+    LT+L  ++NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E
Sbjct: 197 LPNE-ISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQE 255

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPE 293
             +  N LS LPA +G+++KL  L++  N L+   +E  Q   L VL L +N L  LPPE
Sbjct: 256 LILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPE 315

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVN 319
           +G  T L  L ++GN L  L  SLVN
Sbjct: 316 LGNCTVLHVLDVSGNQLLYLPYSLVN 341



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 115 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 174

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 175 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 234

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 235 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 293

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 294 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 352



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 154/314 (49%), Gaps = 21/314 (6%)

Query: 102 SIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           S+ ++P+EI   +  L +    +N +++LP +  R   L     S+N I  LP D+ +  
Sbjct: 24  SLPQVPEEILRYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFE 83

Query: 161 KMSKLDVEGNKLTVLSNNL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
            + +LDV  N +  +  +L        S T L  L   +NLL  +PETI  L++L RLDL
Sbjct: 84  NLVELDVSRNDIPDIDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDL 143

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             N I  +P  +     L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   
Sbjct: 144 GDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISG 203

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L  L+ LDL+ N L  LP  I K++ L  L L  N L+ L  +L N      L      L
Sbjct: 204 LVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELI-----L 258

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
            EN  SE   +    I   T+L+     L+++   L  +P EI +   +  L L  N ++
Sbjct: 259 TENFLSELPAS----IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLK 310

Query: 394 ELPPELSSCASLQV 407
           +LPPEL +C  L V
Sbjct: 311 KLPPELGNCTVLHV 324



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 187 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 233

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 234 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 293

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 294 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 351

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 352 -NQSQPLLTFQPDT 364


>gi|456823284|gb|EMF71754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 455

 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 180/339 (53%), Gaps = 17/339 (5%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  LN++  KL+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + D   N+L  L
Sbjct: 73  LQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 132

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G+  NL +   ++N +T+LP+++     + +LD+  N+LT L    I     L  L
Sbjct: 133 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKE-IGQLQNLKTL 191

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
            +    L  +P+ IG L  L  L+L  N++ ++P  I    +L    +  N ++ALP E+
Sbjct: 192 NSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEI 251

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L  LDLH NQL     E  QL+ L  LDL  N L+ LP EIG++  L++L L  N
Sbjct: 252 GQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 311

Query: 309 PLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
            L TL         P  ++ L++ R+ + ++++ +T  ++++ + + L V    L+L   
Sbjct: 312 QLTTL---------PKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQS-LQV----LALGSN 357

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            LS +P EI +   +  L L  N +  LP E+    +LQ
Sbjct: 358 RLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQ 396



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 158/301 (52%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+++ L  +P E+              +  +LQ+L L+ N++  L +++  L  L  L
Sbjct: 76  LNLNSQKLTTLPKEI-------------GQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 122

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+ LP  IG+L  L+ LD++ N +  +P EI     L + D   NQL  LP  +
Sbjct: 123 DLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEI 182

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL    +    +T+LP+++ +   +  L++  N+LT L    I     L  L+  +
Sbjct: 183 GQLQNLKTLNSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKE-IGELQNLEILVLRE 241

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +P+ IG L  L  LDLHQN++ ++P  I    +L    +  N L+ LP E+G+L 
Sbjct: 242 NRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 301

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  QL+ L VLDL NN L+ LP E+ ++ +L+ L L  N L T
Sbjct: 302 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 361

Query: 313 L 313
           L
Sbjct: 362 L 362



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 135/269 (50%), Gaps = 25/269 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++R L  L  L++  N+L+ LP  IG+L  LK+L+     +  
Sbjct: 141 NLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNSIVTQLTT 200

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +   NQL  LP  +G   NL       N IT+LP+++     +  L
Sbjct: 201 LPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWL 260

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L                        P+ IG L  L RLDLHQN++ ++P  
Sbjct: 261 DLHQNQLTTL------------------------PKEIGQLQNLQRLDLHQNQLTTLPKE 296

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E  +  N L+ LP E+ +L  L  LDL +NQL     E  +L+ L VL L +
Sbjct: 297 IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGS 356

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N LS LP EIG++  L+ L L  N L TL
Sbjct: 357 NRLSTLPKEIGQLQNLQVLGLISNQLTTL 385



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 172/362 (47%), Gaps = 15/362 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L    +  L +++  L  L  L++S N L+ LP  +G+L  L+ LD+  N +  
Sbjct: 72  NLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLAT 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L + D +SN+L  LP  + +  NL +     N +T+LP+++     +  L
Sbjct: 132 LPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +    +LT L    I     L  L    N L  +P+ IG L  L  L L +NRI ++P  
Sbjct: 192 NSIVTQLTTLPKE-IGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKE 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +  N L+ LP E+G+L  L  LDLH NQL     E  QL+ L  L L  
Sbjct: 251 IGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EI ++  LR L L  N L TL   ++   +  +L    +RL       ++  
Sbjct: 311 NQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRL-------STLP 363

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
           KE  I     L V    L L    L+ +P EI +   + +L L  N +   P E+    +
Sbjct: 364 KE--IGQLQNLQV----LGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKN 417

Query: 405 LQ 406
           LQ
Sbjct: 418 LQ 419



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 156/316 (49%), Gaps = 15/316 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +++LD+ +  +  +P EIG    L + + +S +L  LP  +G+  NL +   S N +T+L
Sbjct: 50  VRTLDLRYQKLTILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 109

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + +LD+  N+L  L    I     L EL  + N L  +P+ I  L  L  L
Sbjct: 110 PKEVGQLENLQRLDLHQNRLATLPME-IGQLKNLQELDLNSNKLTTLPKEIRQLRNLQEL 168

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           DLH+N++ ++P  I    +L         L+ LP E+G+L  L TL+L  NQL     E 
Sbjct: 169 DLHRNQLTTLPKEIGQLQNLKTLNSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEI 228

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            +L+ L +L L  N ++ LP EIG++  L+ L L  N L TL   +  G    L      
Sbjct: 229 GELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEI--GQLQNL-----Q 281

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
           RL  +++   +  KE  I     L    +EL L+   L+ +P EI +   +  LDL  N 
Sbjct: 282 RLDLHQNQLTTLPKE--IGQLQNL----QELCLDENQLTTLPKEIEQLQNLRVLDLDNNQ 335

Query: 392 IQELPPELSSCASLQV 407
           +  LP E+    SLQV
Sbjct: 336 LTTLPKEVLRLQSLQV 351



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 1/221 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L+ L L  N +  L +++  L  L +L +  N+++ LP  IG+L  L+ LD+  N 
Sbjct: 207 ELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQ 266

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG    L + D   NQL  LP  +G+  NL +     N +T+LP+++     +
Sbjct: 267 LTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD++ N+LT L   ++   + L  L    N L+ +P+ IG L  L  L L  N++ ++
Sbjct: 327 RVLDLDNNQLTTLPKEVLRLQS-LQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTL 385

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           P  I    +L E  +  N L+  P E+ +L  L  L L+ N
Sbjct: 386 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 426



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L VL++ +N+L+ LP  +  L  L+ L +  N +  
Sbjct: 302 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 361

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP  +G+  NL +     N +T+ P+++     + +L
Sbjct: 362 LPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQEL 421

Query: 166 DVEGNKLT 173
            +  N L+
Sbjct: 422 HLYLNPLS 429



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L VL +  N+LS LP  IG+L  L+ L +  N +  
Sbjct: 325 NLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTT 384

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 385 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430


>gi|255088489|ref|XP_002506167.1| predicted protein [Micromonas sp. RCC299]
 gi|226521438|gb|ACO67425.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 115/342 (33%), Positives = 178/342 (52%), Gaps = 23/342 (6%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  +N+  N+L+ LPA IG+L  L+ L +  N +  +P EIG  TALV+     N L EL
Sbjct: 9   LRTMNLGVNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVELKLEDNMLTEL 68

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+ +G+  +L + K   N +TS+P ++   + +   ++  N+LT L    I     L EL
Sbjct: 69  PAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYNQLTELPAE-IGQLKSLREL 127

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L  +P  IG L+ L+ L L  N + S+P+ I    SL E  + +N L+ LPAE+
Sbjct: 128 NLSNNHLTILPAEIGQLTSLVELKLEGNELTSVPAEIGQLASLVELKLEDNMLTELPAEI 187

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L  L L  N+L     E  QL  L V +L+ N L+ LP EIG++ +LR+L L+ N
Sbjct: 188 GQLKSLVELKLEGNELTSMPAEIGQLTSLVVSNLNYNQLTELPAEIGQLKSLRELNLSNN 247

Query: 309 PLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
            L +L         PA +  L+S    +L +N  +E       L ++         EL+L
Sbjct: 248 QLTSL---------PAEIGQLKSLVELKLEDNMLTELPAEIGQLKSLV--------ELNL 290

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
               L+++P+EI +   + +L L  N + ELP E+    SL+
Sbjct: 291 YNNRLTSVPAEIGQLTSLVELKLEDNMLTELPAEIGQLKSLR 332



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 209/418 (50%), Gaps = 35/418 (8%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           L A RT   +NL    L  +P E+              +   L++L L  N +  +  ++
Sbjct: 6   LGALRT---MNLGVNQLTSLPAEI-------------GQLTSLRELGLEGNELTSVPAEI 49

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L +  N L+ELPA IG+L  L  L +  N +  +P EIG   +LV  + + N
Sbjct: 50  GQLTALVELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYN 109

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL ELP+ +G+  +L +   SNN +T LP ++   + + +L +EGN+LT +    I    
Sbjct: 110 QLTELPAEIGQLKSLRELNLSNNHLTILPAEIGQLTSLVELKLEGNELTSVPAE-IGQLA 168

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L EL    N+L  +P  IG L  L+ L L  N + S+P+ I    SL    +  N L+ 
Sbjct: 169 SLVELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLTSLVVSNLNYNQLTE 228

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LPAE+G+L  L  L+L +NQL     E  QL+ L  L L +N L+ LP EIG++ +L +L
Sbjct: 229 LPAEIGQLKSLRELNLSNNQLTSLPAEIGQLKSLVELKLEDNMLTELPAEIGQLKSLVEL 288

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L ++ + +  G   +L++    +L +N  +E       L ++        +EL 
Sbjct: 289 NLYNNRLTSVPAEI--GQLTSLVEL---KLEDNMLTELPAEIGQLKSL--------RELK 335

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCIS 421
           L    L+++P+EI +   +T+LDL  N +  +P E+    SL    ++LV +K    S
Sbjct: 336 LWNNRLTSVPAEIGQLTSLTELDLRCNELTSVPAEIGQLTSL----TELVLHKNQLTS 389



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 13/120 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL N  L  VP E+              +   L +L L  N + +L  ++  L  L  L
Sbjct: 288 LNLYNNRLTSVPAEI-------------GQLTSLVELKLEDNMLTELPAEIGQLKSLREL 334

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + +N+L+ +PA IG+L  L  LD+  N +  +P EIG  T+L +     NQL  LP+ +
Sbjct: 335 KLWNNRLTSVPAEIGQLTSLTELDLRCNELTSVPAEIGQLTSLTELVLHKNQLTSLPAEI 394


>gi|421113137|ref|ZP_15573589.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
 gi|410801511|gb|EKS07677.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
          Length = 444

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/337 (33%), Positives = 172/337 (51%), Gaps = 15/337 (4%)

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
           S++ L  LP  IG+L  L+ LD+S N +M +P EIG    L K + + N+L  LP  +G+
Sbjct: 64  SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGK 123

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             NL +    NN +T+LPE++     + +L++  N+LT L    I     L EL    N 
Sbjct: 124 LQNLQELHLENNQLTTLPEEIGKLQNLQELNLGFNQLTALPKG-IEKLQKLQELHLYSNR 182

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +PE IG L  L +L+L  N++ ++P  I     L + Y+ +N L+ LP E+ KL  L
Sbjct: 183 LANLPEEIGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNL 242

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L  NQL     E  +L+ L  L L  N L+ LP EIGK+  L+ L L G+ L TL 
Sbjct: 243 RDLYLEGNQLTTLSKEIGKLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQLTTLP 302

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +        L+ LR    EN  ++ +T  + +  +        +EL L    L+ +P 
Sbjct: 303 KGIEK------LQNLRDLYLEN--NQLTTLPKGIEKLQ-----NLQELYLSSNKLTTLPE 349

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           EI +  ++ +LDLS+N +  LP E+     L+  + D
Sbjct: 350 EIEKLQKLQRLDLSKNKLTTLPKEIGKLQKLRGLYLD 386



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 156/308 (50%), Gaps = 15/308 (4%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL+   L ++P E+ K               +LQ+L L +N +  L E++  L  L  
Sbjct: 106 KLNLTRNRLANLPEEIGK-------------LQNLQELHLENNQLTTLPEEIGKLQNLQE 152

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ LP  I +L  L+ L +  N +  +P+EIG    L K +   NQL  LP  
Sbjct: 153 LNLGFNQLTALPKGIEKLQKLQELHLYSNRLANLPEEIGKLQNLQKLNLGVNQLTALPKG 212

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +   L      +N +T+LPE++     +  L +EGN+LT LS   I     L +L   
Sbjct: 213 IEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEGNQLTTLSKE-IGKLQNLRDLYLG 271

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L +L  L L  +++ ++P  I    +L + Y+ NN L+ LP  + KL
Sbjct: 272 GNQLTTLPKEIGKLQKLQTLHLEGSQLTTLPKGIEKLQNLRDLYLENNQLTTLPKGIEKL 331

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L L SN+L     E  +L +L  LDLS N L+ LP EIGK+  LR L L  N L+
Sbjct: 332 QNLQELYLSSNKLTTLPEEIEKLQKLQRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLK 391

Query: 312 TLRSSLVN 319
           TL   + N
Sbjct: 392 TLPEEIGN 399



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/315 (33%), Positives = 151/315 (47%), Gaps = 14/315 (4%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+L N  L  +P E+ K  N  E   G     A+         LQ+L L  N +  L E
Sbjct: 129 ELHLENNQLTTLPEEIGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLANLPE 188

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+  N+L+ LP  I +L  L+ L +  N +  +P+EI     L      
Sbjct: 189 EIGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLE 248

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  L   +G+  NL D     N +T+LP+++    K+  L +EG++LT L    I  
Sbjct: 249 GNQLTTLSKEIGKLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQLTTLPKG-IEK 307

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P+ I  L  L  L L  N++ ++P  I     L    +  N L
Sbjct: 308 LQNLRDLYLENNQLTTLPKGIEKLQNLQELYLSSNKLTTLPEEIEKLQKLQRLDLSKNKL 367

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+GKL KL  L L  NQLK    E   L+ L  L+L  NSL+  P EIGK+  L+
Sbjct: 368 TTLPKEIGKLQKLRGLYLDHNQLKTLPEEIGNLQSLESLNLRGNSLTSFPEEIGKLQKLQ 427

Query: 302 KLLLTGNPLRTLRSS 316
           +L L GNP   LRS 
Sbjct: 428 QLYLGGNPF--LRSQ 440



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 173/365 (47%), Gaps = 21/365 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N +  L +++  L  L  LN++ N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 80  NLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELHLENNQLTT 139

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L + +   NQL  LP  + +   L +    +N + +LPE++     + KL
Sbjct: 140 LPEEIGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLANLPEEIGKLQNLQKL 199

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT L    I     L +L    N L  +PE I  L  L  L L  N++ ++   
Sbjct: 200 NLGVNQLTALPKG-IEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEGNQLTTLSKE 258

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLS 283
           I    +L + Y+G N L+ LP E+GKL KL TL L  +QL      +E  Q  L  L L 
Sbjct: 259 IGKLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQLTTLPKGIEKLQ-NLRDLYLE 317

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP  I K+  L++L L+ N L TL   +       L K  R  L +N+      
Sbjct: 318 NNQLTTLPKGIEKLQNLQELYLSSNKLTTLPEEI-----EKLQKLQRLDLSKNK------ 366

Query: 344 TKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
               L T+   +    K   L L+   L  +P EI     +  L+L  NS+   P E+  
Sbjct: 367 ----LTTLPKEIGKLQKLRGLYLDHNQLKTLPEEIGNLQSLESLNLRGNSLTSFPEEIGK 422

Query: 402 CASLQ 406
              LQ
Sbjct: 423 LQKLQ 427


>gi|328779859|ref|XP_003249714.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis
           mellifera]
          Length = 565

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 204/407 (50%), Gaps = 33/407 (8%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK+ R    L+L +  L ++P+ VYK               +L  L L  N +  + +++
Sbjct: 152 LKSLRV---LDLRHNKLSEIPDVVYK-------------LTNLTTLFLRFNRVRYVSDNI 195

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           RNL  LT+L++  NK+ ELPA IG+L  L + DVS N +  +P+EIG+   L   D   N
Sbjct: 196 RNLTNLTMLSLRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHN 255

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L ++P ++G  ++L+      N +T++P+ LA+C  M +  VEGN+++ L + L+AS +
Sbjct: 256 ELLDIPDTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLS 315

Query: 185 MLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNAL 242
            LT +  S+N     P       + +  ++L  N+I  IP  I S   +LA+  M  N L
Sbjct: 316 DLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQL 375

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           +ALP ++G    +  L+L +NQL +   +  C   L VL LSNN L  +P  I  +  LR
Sbjct: 376 TALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLR 435

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N + +L         P  + +LR        S   T+    I   T L+     
Sbjct: 436 VLDLEENKIESL---------PNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTY---- 482

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQV 407
           LS+   NL+ +P EI     +  L ++ N+ +  LP EL+ C +L +
Sbjct: 483 LSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSI 529



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 158/375 (42%), Gaps = 88/375 (23%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L    +R++P         AG G    + ++L    ++HN++E L E++ N   L+ L
Sbjct: 204 LSLRENKIRELP---------AGIG----KLINLITFDVSHNHLEHLPEEIGNCVQLSTL 250

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ HN+L ++P  IG L  L  L + +N +  IP  + +   + +F    NQ+ +LP  L
Sbjct: 251 DLQHNELLDIPDTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGL 310

Query: 134 -------------------------------------------------GRCLNLSDFKA 144
                                                             R  NL+    
Sbjct: 311 LASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNM 370

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLT---------------VLSNNL-------IAS 182
             N +T+LP D+     M +L++  N+LT               +LSNNL       IA+
Sbjct: 371 KENQLTALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIAN 430

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L   +N +  +P  IG L  L +L L  N++ S+P +I    +L    +G N L
Sbjct: 431 LRKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNL 490

Query: 243 SALPAELGKLSKLGTLDLHSN-QLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEI--GKMT 298
           + LP E+G L  L +L ++ N  L     E A    LS++ + N  LS +PPEI  G  +
Sbjct: 491 NYLPEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPLSQIPPEIVAGGPS 550

Query: 299 TLRKLLLTGNPLRTL 313
            + + L    P R++
Sbjct: 551 LVIQFLKMQGPYRSM 565


>gi|380011078|ref|XP_003689640.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis florea]
          Length = 610

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 204/407 (50%), Gaps = 33/407 (8%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK+ R    L+L +  L ++P+ VYK               +L  L L  N +  + +++
Sbjct: 197 LKSLRV---LDLRHNKLSEIPDVVYK-------------LTNLTTLFLRFNRVRYVSDNI 240

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           RNL  LT+L++  NK+ ELPA IG+L  L + DVS N +  +P+EIG+   L   D   N
Sbjct: 241 RNLTNLTMLSLRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHN 300

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L ++P ++G  ++L+      N +T++P+ LA+C  M +  VEGN+++ L + L+AS +
Sbjct: 301 ELLDIPDTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLS 360

Query: 185 MLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNAL 242
            LT +  S+N     P       + +  ++L  N+I  IP  I S   +LA+  M  N L
Sbjct: 361 DLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQL 420

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           +ALP ++G    +  L+L +NQL +   +  C   L VL LSNN L  +P  I  +  LR
Sbjct: 421 TALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRKLR 480

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N + +L         P  + +LR        S   T+    I   T L+     
Sbjct: 481 VLDLEENKIESL---------PNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTY---- 527

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQV 407
           LS+   NL+ +P EI     +  L ++ N+ +  LP EL+ C +L +
Sbjct: 528 LSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSI 574



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 158/375 (42%), Gaps = 88/375 (23%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L    +R++P         AG G    + ++L    ++HN++E L E++ N   L+ L
Sbjct: 249 LSLRENKIRELP---------AGIG----KLINLITFDVSHNHLEHLPEEIGNCVQLSTL 295

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ HN+L ++P  IG L  L  L + +N +  IP  + +   + +F    NQ+ +LP  L
Sbjct: 296 DLQHNELLDIPDTIGNLISLTRLGLRYNRLTNIPKSLANCKLMDEFSVEGNQVSQLPDGL 355

Query: 134 -------------------------------------------------GRCLNLSDFKA 144
                                                             R  NL+    
Sbjct: 356 LASLSDLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNM 415

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLT---------------VLSNNL-------IAS 182
             N +T+LP D+     M +L++  N+LT               +LSNNL       IA+
Sbjct: 416 KENQLTALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIAN 475

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L   +N +  +P  IG L  L +L L  N++ S+P +I    +L    +G N L
Sbjct: 476 LRKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNL 535

Query: 243 SALPAELGKLSKLGTLDLHSN-QLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEI--GKMT 298
           + LP E+G L  L +L ++ N  L     E A    LS++ + N  LS +PPEI  G  +
Sbjct: 536 NYLPEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPLSQIPPEIVAGGPS 595

Query: 299 TLRKLLLTGNPLRTL 313
            + + L    P R++
Sbjct: 596 LVIQFLKMQGPYRSM 610


>gi|224052809|ref|XP_002197870.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Taeniopygia guttata]
          Length = 582

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 207/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+                L  L L  N I  +++D++NL  LT+L
Sbjct: 174 LDLRHNKLREIPSVVYR-------------LSSLATLYLRFNRITTVEKDIKNLSKLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P+EIGS T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P+ LA CS++ +L++E N ++ L   L++S   LT L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  + +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PS+I     L E Y+ +N L  LPAE+G                   
Sbjct: 103 MRLDLSKRSIHLLPSAIKELTQLTELYLYSNKLQCLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    + A L YL
Sbjct: 144 ---CLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLSSLATL-YL 199

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   ++L++    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSKLTM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ SC   Q+   DL  N+
Sbjct: 247 HNQLEHLPEEIGSCT--QITNLDLQHNE 272


>gi|410451706|ref|ZP_11305708.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014472|gb|EKO76602.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 515

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 182/362 (50%), Gaps = 15/362 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N +  L +++  L  L  LN++ N+L+ LP  IG+L  L+ LD+  N +  
Sbjct: 136 NLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELDLEGNQLAT 195

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG+   L   D   NQL  LP  +G+  NL      NN +T+ P+++ D   +  L
Sbjct: 196 LPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTFPKEIEDLQNLKIL 255

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L    +     L E+ +SKN L  +P+ IG+L  L  L L  N++ ++P  
Sbjct: 256 SLGNNQLTTLPKE-VGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQLTALPKE 314

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    +L + Y+  N L+ LP E+G L  L  L L +N+L  +  E   L +L  L L+ 
Sbjct: 315 IGNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIGNLQKLKWLGLNK 374

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ +P EIG +  L++L L+ N L T+   + N      L+ L+  L  N +   +  
Sbjct: 375 NQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIEN------LQNLQV-LDLNNNQLTALP 427

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
           KE  I     L    KEL L    L+ +P EI     +  LDLS N +   P E+     
Sbjct: 428 KE--IGNLQNL----KELDLTSNRLTTLPKEIGNLQSLESLDLSNNPLTSFPEEIGKLQH 481

Query: 405 LQ 406
           L+
Sbjct: 482 LK 483



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 183/387 (47%), Gaps = 27/387 (6%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILA-----HNN--IEKLKEDLRNLPLLTVLNVSHNKL 80
           VY N  EA     +    D+Q L L      H+N  +  L +++  L  L  L++S N+L
Sbjct: 93  VYYNLTEA-----FQHPTDVQYLYLGPRERKHSNDPLWTLPKEIGKLQNLRDLDLSSNQL 147

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
             LP  IG+L  L+ L+++ N +  +P+EIG    L + D   NQL  LP  +G   NL 
Sbjct: 148 MTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELDLEGNQLATLPEEIGNLQNLQ 207

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
                 N +T+LP+++     + KL +  N+LT      I     L  L    N L  +P
Sbjct: 208 TLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTFPKE-IEDLQNLKILSLGNNQLTTLP 266

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + +G L  L  +   +N++ ++P  I    +L E Y+ +N L+ALP E+G L  L  L L
Sbjct: 267 KEVGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQLTALPKEIGNLQNLQQLYL 326

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           + NQL    +E   L+ L  L L NN L+  P EIG +  L+ L L  N L T+   + N
Sbjct: 327 YGNQLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIGNLQKLKWLGLNKNQLTTIPKEIGN 386

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                 L+ L+     N  S   TT    I     L V    L L    L+A+P EI   
Sbjct: 387 ------LQNLKEL---NLSSNQLTTIPKEIENLQNLQV----LDLNNNQLTALPKEIGNL 433

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQ 406
             + +LDL+ N +  LP E+ +  SL+
Sbjct: 434 QNLKELDLTSNRLTTLPKEIGNLQSLE 460



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 162/333 (48%), Gaps = 38/333 (11%)

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
           S++ L  LP  IG+L  L+ LD+S N +M +P EIG    L K + + N+L  LP  +G+
Sbjct: 120 SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGK 179

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             NL +     N + +LPE++ +   +  LD+EGN+LT L                    
Sbjct: 180 LQNLQELDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTL-------------------- 219

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
               P+ IG L  L +L L+ NR+ + P  I    +L    +GNN L+ LP E+GKL  L
Sbjct: 220 ----PKEIGKLQNLKKLYLYNNRLTTFPKEIEDLQNLKILSLGNNQLTTLPKEVGKLQNL 275

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             +    NQL     E   L+ L  L L++N L+ LP EIG +  L++L L GN L TL 
Sbjct: 276 QEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTLP 335

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             + N      L+ L+  L    +   +  KE  I    +L    K L L    L+ IP 
Sbjct: 336 IEIGN------LQNLQG-LHLGNNKLTAFPKE--IGNLQKL----KWLGLNKNQLTTIPK 382

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           EI     + +L+LS N +  +P E+ +  +LQV
Sbjct: 383 EIGNLQNLKELNLSSNQLTTIPKEIENLQNLQV 415



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL L +N +    +++ +L  L +L++ +N+L+ LP  +G+L  L+ +  S N +  
Sbjct: 228 NLKKLYLYNNRLTTFPKEIEDLQNLKILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTT 287

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L +   + NQL  LP  +G   NL       N +T+LP ++ +   +  L
Sbjct: 288 LPKEIGNLQNLQELYLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGL 347

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  NKLT      I +   L  L  +KN L  +P+ IG+L  L  L+L  N++ +IP  
Sbjct: 348 HLGNNKLTAFPKE-IGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKE 406

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + NN L+ALP E+G L  L  LDL SN+L     E   L+ L  LDLSN
Sbjct: 407 IENLQNLQVLDLNNNQLTALPKEIGNLQNLKELDLTSNRLTTLPKEIGNLQSLESLDLSN 466

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNP 309
           N L+  P EIGK+  L++L L   P
Sbjct: 467 NPLTSFPEEIGKLQHLKRLRLENIP 491



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 120/259 (46%), Gaps = 34/259 (13%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           L+L N  L  +P EV K  N  E          +        +LQ+L LAHN +  L ++
Sbjct: 255 LSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQLTALPKE 314

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + NL  L  L +  N+L+ LP  IG L  L+ L +  N +   P EIG+   L     + 
Sbjct: 315 IGNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIGNLQKLKWLGLNK 374

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  +P  +G   NL +   S+N +T++P+++ +   +  LD+  N+LT L        
Sbjct: 375 NQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQNLQVLDLNNNQLTAL-------- 426

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P+ IG+L  L  LDL  NR+ ++P  I    SL    + NN L+
Sbjct: 427 ----------------PKEIGNLQNLKELDLTSNRLTTLPKEIGNLQSLESLDLSNNPLT 470

Query: 244 ALPAELGKLSKLGTLDLHS 262
           + P E+GKL  L  L L +
Sbjct: 471 SFPEEIGKLQHLKRLRLEN 489



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 5/120 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L+ N +  + +++ NL  L VL++++N+L+ LP  IG L  LK LD++ N +  
Sbjct: 389 NLKELNLSSNQLTTIPKEIENLQNLQVLDLNNNQLTALPKEIGNLQNLKELDLTSNRLTT 448

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+  +L   D S+N L   P  +G+  +L   +  N     +P  L    K+ KL
Sbjct: 449 LPKEIGNLQSLESLDLSNNPLTSFPEEIGKLQHLKRLRLEN-----IPTLLPQKEKIRKL 503


>gi|421100175|ref|ZP_15560811.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796765|gb|EKR98888.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 406

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 176/365 (48%), Gaps = 42/365 (11%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + VL++S   L+  P  I +   LK LD+S N +  +P EIG    L K 
Sbjct: 40  LTEALKNPMDVGVLDLSSKLLTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKL 99

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           + S N L ELP  +G+  NL     S N +T+LP+++    K+  L V  N+LT+L    
Sbjct: 100 NVSVNNLIELPQEIGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTILPKE- 158

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L ELI   N L  +PE IG L +  +L LH N++ ++P  +    +L + Y+  
Sbjct: 159 IGQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGLCKLQNLEQIYLHQ 218

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L++LP E+G+L KL TL L+SN+L     E  QL+ L  L L  N+L+ LP EIG++ 
Sbjct: 219 NRLTSLPKEIGQLRKLWTLYLYSNELTTLPEEIGQLQNLRQLSLKLNNLTTLPKEIGQLQ 278

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L  L L+ N L  +         P  +  L++                           
Sbjct: 279 NLDNLDLSDNQLTLI---------PKEIGQLQNL-------------------------- 303

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV----KFSDLVT 414
            K L L G +L+ +P EI +   +  LDLS NS+  LP E+    +L         DL+ 
Sbjct: 304 -KLLDLSGNSLTTLPKEIGQLQNLKLLDLSGNSLTTLPKEIGQLKNLYFLAMKGIPDLIL 362

Query: 415 NKESC 419
            KE+ 
Sbjct: 363 QKENI 367



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 161/310 (51%), Gaps = 15/310 (4%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK     G L+LS++ L   P  + K               +L+ L L++N ++ L +++
Sbjct: 44  LKNPMDVGVLDLSSKLLTTFPKGIEK-------------FQNLKHLDLSNNQLKALPKEI 90

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  LNVS N L ELP  IG+L  L+ L++S N +  +P EIG    L       N
Sbjct: 91  GQLQNLQKLNVSVNNLIELPQEIGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYN 150

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L  LP  +G+  NL +     N +TSLPE++    K  KL +  N+LT L   L     
Sbjct: 151 RLTILPKEIGQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGL-CKLQ 209

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L ++   +N L  +P+ IG L +L  L L+ N + ++P  I    +L +  +  N L+ 
Sbjct: 210 NLEQIYLHQNRLTSLPKEIGQLRKLWTLYLYSNELTTLPEEIGQLQNLRQLSLKLNNLTT 269

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+G+L  L  LDL  NQL     E  QL+ L +LDLS NSL+ LP EIG++  L+ L
Sbjct: 270 LPKEIGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNSLTTLPKEIGQLQNLKLL 329

Query: 304 LLTGNPLRTL 313
            L+GN L TL
Sbjct: 330 DLSGNSLTTL 339



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 6/136 (4%)

Query: 34  EAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHML 93
           E G+  K W       L L  N +  L E++  L  L  L++  N L+ LP  IG+L  L
Sbjct: 227 EIGQLRKLW------TLYLYSNELTTLPEEIGQLQNLRQLSLKLNNLTTLPKEIGQLQNL 280

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
            +LD+S N +  IP EIG    L   D S N L  LP  +G+  NL     S N +T+LP
Sbjct: 281 DNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNSLTTLPKEIGQLQNLKLLDLSGNSLTTLP 340

Query: 154 EDLADCSKMSKLDVEG 169
           +++     +  L ++G
Sbjct: 341 KEIGQLKNLYFLAMKG 356


>gi|260821310|ref|XP_002605976.1| hypothetical protein BRAFLDRAFT_126569 [Branchiostoma floridae]
 gi|229291313|gb|EEN61986.1| hypothetical protein BRAFLDRAFT_126569 [Branchiostoma floridae]
          Length = 519

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 177/385 (45%), Gaps = 84/385 (21%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK-NFDEAGEG--------DKWWEAVDLQKLILAH 54
           +LK AR SG LNLSNR L  VP+ V++ N D   E         D+WWE VDL KLILA 
Sbjct: 33  LLKQARKSGQLNLSNRGLEKVPDTVWRINLDVPEEAKNVTFDGEDRWWEQVDLTKLILAS 92

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N + +L  DL  LP L VL+V  N+L+ LP  IG+L  L+ L+VS      +P  +G  +
Sbjct: 93  NKLSELSPDLNQLPALVVLDVHDNELTSLPKEIGDLQHLQKLNVS------LPFSLGLMS 146

Query: 115 ALVKFDCSSNQLKEL------------------------------------PSSLGRCLN 138
           +L   +   N L+ +                                    P++ G  ++
Sbjct: 147 SLKSVNLDGNPLRTIRRDVIQRGTSELLKYLRTRIEEPKGGDAAPLTPDPEPAAPGSTID 206

Query: 139 ------LSDFKASNNCITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTEL 189
                       SN    S+P+DL D  +   +S +++  N LT     L+     LT+L
Sbjct: 207 TFTVHKTKSINYSNKNAASIPDDLLDTGRDMFVSDMNLSKNVLTTFPVGLVQLAATLTDL 266

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L+ +   IG L+RL  LDL   R    PS +     L   +  +N ++A+  + 
Sbjct: 267 NLSFNKLSALGAEIGQLTRLTTLDL---RFQQFPSVLYSLVKLENIFANDNHITAIDVD- 322

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
                 G L L +              L+ LDL NN +  +PP++G +T+LR L L GNP
Sbjct: 323 ------GLLKLPA--------------LATLDLQNNDIMQVPPQLGNVTSLRSLQLGGNP 362

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLP 334
            R  R +++   T  LL+YLR R+P
Sbjct: 363 FRVPRPAILAKSTADLLEYLRGRIP 387



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 16/183 (8%)

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L +  + +N LS L  +L +L  L  LD+H N+L     E   L+ L  L++S      L
Sbjct: 85  LTKLILASNKLSELSPDLNQLPALVVLDVHDNELTSLPKEIGDLQHLQKLNVS------L 138

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL-- 348
           P  +G M++L+ + L GNPLRT+R  ++   T  LLKYLR+R+ E +  +A+    D   
Sbjct: 139 PFSLGLMSSLKSVNLDGNPLRTIRRDVIQRGTSELLKYLRTRIEEPKGGDAAPLTPDPEP 198

Query: 349 ----ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSS 401
                T+ T     +K ++    N ++IP ++ + G    ++ ++LS+N +   P  L  
Sbjct: 199 AAPGSTIDTFTVHKTKSINYSNKNAASIPDDLLDTGRDMFVSDMNLSKNVLTTFPVGLVQ 258

Query: 402 CAS 404
            A+
Sbjct: 259 LAA 261


>gi|456875008|gb|EMF90242.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 557

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 186/384 (48%), Gaps = 36/384 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           DL++L L +N +  L +++  L  L  LN+++N+L  LP  IG L  L+ L+V  N ++ 
Sbjct: 131 DLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLIT 190

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L     + NQL  LP  +GR  NL D    NN + +LP+++     +  L
Sbjct: 191 LPQEIGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSL 250

Query: 166 DVEGNKLTVLSNNLIA----SWTMLTE------------------LIASKNLLNGMPETI 203
           ++E N+L  L   + A     W  LT                   L  + N L  +P+ I
Sbjct: 251 NLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQEI 310

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L  L  L L  NR+ S P  I    +L   ++  N  + LP E+G L +L  L+L  N
Sbjct: 311 GKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHN 370

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           QL     E  +L RL  L+L NN L+ LP EIG +  L+ L L  N L TL   +     
Sbjct: 371 QLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKEI----- 425

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
              L+ L+    + E ++ +T  E + T+  RL      LSL+   L+ +P EI    +I
Sbjct: 426 -GQLQNLKDL--DLEYNQLATLPEAIGTLQ-RLEW----LSLKNNQLTTLPEEIGTLQKI 477

Query: 383 TKLDLSRNSIQELPPELSSCASLQ 406
            KL+L+ N ++ LP  +    SL+
Sbjct: 478 VKLNLANNQLRTLPQGIGQLQSLK 501



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 184/362 (50%), Gaps = 15/362 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L LA+N ++ L +++  L  L  L +S N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 62  NLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQLTT 121

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP EIG+   L +    +NQL  LP  +G   +L +   +NN + +LP+++     +  L
Sbjct: 122 IPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDL 181

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +V  N+L  L    I +   L  L  + N L  +PE IG L  L  L++  N+++++P  
Sbjct: 182 NVFNNQLITLPQE-IGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLPQE 240

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    +L    + NN L  LP E+G L KL  L L +NQL     E  +L RL  L L+N
Sbjct: 241 IGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPQEIGKLQRLEWLGLTN 300

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L  LP EIGK+  L++L+L  N L +    +  G  P L      RL   E +  +T 
Sbjct: 301 NQLKSLPQEIGKLQNLKELILENNRLESFPKEI--GTLPNL-----QRL-HLEYNRFTTL 352

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
            +++ T+  RL      L+LE   L+ +P EI     +  L+L  N +  LP E+ +   
Sbjct: 353 PQEIGTLH-RLPW----LNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQK 407

Query: 405 LQ 406
           LQ
Sbjct: 408 LQ 409



 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 121/375 (32%), Positives = 176/375 (46%), Gaps = 16/375 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           DL++L LA+N +  L +++  L  L  LNV +N+L  LP  IG L  LK L +++N +  
Sbjct: 154 DLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTT 213

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L   +  +NQL  LP  +G   NL      NN + +LP+++    K+  L
Sbjct: 214 LPEEIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWL 273

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  + N L  +P+ IG L  L  L L  NR+ S P  
Sbjct: 274 YLTNNQLATLPQE-IGKLQRLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKE 332

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    +L   ++  N  + LP E+G L +L  L+L  NQL     E  +L RL  L+L N
Sbjct: 333 IGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYN 392

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL----LKYLR-SRLPE---- 335
           N L+ LP EIG +  L+ L L  N L TL   +  G    L    L+Y + + LPE    
Sbjct: 393 NRLATLPKEIGTLQKLQHLYLANNQLATLPKEI--GQLQNLKDLDLEYNQLATLPEAIGT 450

Query: 336 -NEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
                  S     L T+   +    K  +L+L    L  +P  I +   +  LDLS N  
Sbjct: 451 LQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPF 510

Query: 393 QELPPELSSCASLQV 407
              P E+     LQ+
Sbjct: 511 TTFPKEIVGLKHLQI 525



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 143/298 (47%), Gaps = 15/298 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL N  L  +P E+       G   K      L+ L L +N +  L +++  L  L  
Sbjct: 249 SLNLENNRLVTLPKEI-------GALQK------LEWLYLTNNQLATLPQEIGKLQRLEW 295

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +++N+L  LP  IG+L  LK L +  N +   P EIG+   L +     N+   LP  
Sbjct: 296 LGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQE 355

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G    L      +N +T+LP+++    ++  L++  N+L  L    I +   L  L  +
Sbjct: 356 IGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKE-IGTLQKLQHLYLA 414

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  LDL  N++ ++P +I     L    + NN L+ LP E+G L
Sbjct: 415 NNQLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTL 474

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            K+  L+L +NQL+       QL+ L  LDLS N  +  P EI  +  L+ L L   P
Sbjct: 475 QKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIVGLKHLQILKLKNIP 532



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 97/216 (44%), Gaps = 18/216 (8%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L   P  IG+L  L  L L  N++ ++P  I     L   Y+  N L+ LP E+GKL 
Sbjct: 48  NQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLATLPKEIGKLQ 107

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           +L  L L  NQL     E   L+ L  L L NN L  LP EIG +  L +L L  N LRT
Sbjct: 108 RLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRT 167

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLS 370
           L   +        L++L+         + +     LIT+   +      K L L    L+
Sbjct: 168 LPKEI------GTLQHLQ---------DLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLT 212

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P EI     +  L++  N +  LP E+ +  +LQ
Sbjct: 213 TLPEEIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQ 248


>gi|387016708|gb|AFJ50473.1| Leucine-rich repeat protein SHOC-2-like [Crotalus adamanteus]
          Length = 582

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 196/398 (49%), Gaps = 56/398 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           ++L +  LR++P  VY+                L  L L  N I  +++D++NL  LT+L
Sbjct: 174 VDLRHNKLREIPPVVYR-------------LTSLTTLYLRFNRITSVEKDIKNLSNLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T + K D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L       N ++++P  LA CSK+ +L++E N ++ L   L++S   LT L  ++
Sbjct: 281 GNLSTLKSLGLRYNRLSAIPRTLAQCSKLDELNLENNIISTLPEGLLSSLVNLTSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRNLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YLR                DL     RL +T+ +       
Sbjct: 459 KLESL---------PNEIAYLR----------------DL----QRLILTNNQ------- 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           LS +P  I     +T L L  N + +LP E+ +  +L+
Sbjct: 483 LSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLE 520



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 26/205 (12%)

Query: 70  LTVLNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           +  LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL +
Sbjct: 357 IYALNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNK 416

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           +P  +   ++L     SNN + +LP  + +  K+ +LD+E NKL  L N  IA    L  
Sbjct: 417 IPEDVSGLVSLEVLILSNNLLRNLPHGIGNLRKLRELDLEENKLESLPNE-IAYLRDLQR 475

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA------- 241
           LI + N L+ +P  IG L  L  L L +N +  +P  I    +L E Y+ +N        
Sbjct: 476 LILTNNQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPF 535

Query: 242 -----------------LSALPAEL 249
                            LS LPA++
Sbjct: 536 ELALCSKLSIMSIENCPLSTLPAQI 560



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 147/329 (44%), Gaps = 40/329 (12%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           V+ D +   +  LPSS+     L++     N + SLP ++     +  L +  N LT L 
Sbjct: 103 VRLDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  +    N L  +P  +  L+ L  L L  NRI S+   I    +L    
Sbjct: 163 DSL-GNLKQLRMVDLRHNKLREIPPVVYRLTSLTTLYLRFNRITSVEKDIKNLSNLTMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPL----RTLR-----------------------SSLVNGPTPALLKY 328
            ++TL+ L L  N L    RTL                        SSLVN  +  L + 
Sbjct: 282 NLSTLKSLGLRYNRLSAIPRTLAQCSKLDELNLENNIISTLPEGLLSSLVNLTSLTLARN 341

Query: 329 LRSRLPENEDSEASTT-----KEDLIT-----MATRLSVTSKELSLEGMNLSAIPSEIWE 378
                P    S+ ST      + + I      + +R  V SK L+++   L+++P +   
Sbjct: 342 CFQSYPVGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSK-LNMKDNQLTSLPLDFGT 400

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQV 407
              + +L+L+ N + ++P ++S   SL+V
Sbjct: 401 WTSMVELNLATNQLNKIPEDVSGLVSLEV 429



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLNKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L  LP  IG L  L+ LD+  N +  +P+EI     L +   ++
Sbjct: 421 VSGLVSLEVLILSNNLLRNLPHGIGNLRKLRELDLEENKLESLPNEIAYLRDLQRLILTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G  +NL+      N +T LPE+                        LA C
Sbjct: 481 NQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSTLPAQIVA 562



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 17/207 (8%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSS+     L E Y+  N L +LPAE+G L  L TL L  N L    
Sbjct: 103 VRLDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSLP 162

Query: 270 VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L+ L ++DL +N L  +PP + ++T+L  L L  N + ++   + N     +L  
Sbjct: 163 DSLGNLKQLRMVDLRHNKLREIPPVVYRLTSLTTLYLRFNRITSVEKDIKNLSNLTMLS- 221

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               + EN+  +      +L  + T        L +    L  +P EI    +ITKLDL 
Sbjct: 222 ----IRENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCTQITKLDLQ 269

Query: 389 RNSIQELPP---ELSSCASLQVKFSDL 412
            N + +LP     LS+  SL ++++ L
Sbjct: 270 HNELLDLPDTIGNLSTLKSLGLRYNRL 296


>gi|422002277|ref|ZP_16349515.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259209|gb|EKT88588.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 533

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 201/414 (48%), Gaps = 45/414 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L+N  L+ +P E+     E  +  KW        L L+ N ++ L +++  L  L VL
Sbjct: 66  LSLANNQLKTLPKEI-----ETLQKLKW--------LYLSENQLKTLPKEIGTLQNLEVL 112

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L  LP+ IG+L  L+ L +  N ++ +P EIG+   L + + ++NQL+ L   +
Sbjct: 113 DLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILSKEI 172

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L D    NN + +LP+++     +  L +  N+LT L    I     L +L    
Sbjct: 173 GTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLAYNQLTTLPKE-IGRLENLQDLNIFN 231

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG+L  L  L+L  NR++++P  I     L   Y+ NN L+ LP E+GKL 
Sbjct: 232 NQLITLPQEIGTLQNLQSLNLANNRLVTLPKEIGTLQKLEWLYLTNNQLATLPQEIGKLQ 291

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L L +NQLK    E  +L+ L  L L NN L   P EIG ++ L++L L  N   T
Sbjct: 292 KLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTT 351

Query: 313 LRSSLVNGPTPALLKYLRSRLP--ENEDSEASTTKEDLITMA---------TRLSVTSKE 361
           L         P  +  L  RLP    E ++ +T  +++  +           RL+   KE
Sbjct: 352 L---------PEEIGTLH-RLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKE 401

Query: 362 ---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                    L L    L+ +P EI +   +  LDLS N +  LP E+ +   L+
Sbjct: 402 IGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLE 455



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/274 (35%), Positives = 144/274 (52%), Gaps = 2/274 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L + +N +  L +++  L  L  LN+++N+L  LP  IG L  L+ L ++ N +  
Sbjct: 223 NLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTLPKEIGTLQKLEWLYLTNNQLAT 282

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L     ++NQLK LP  +G+  NL +    NN + S P+++   S + +L
Sbjct: 283 LPQEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRL 342

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +E N+ T L    I +   L  L    N L  +P+ IG L RL  L+L+ NR+ ++P  
Sbjct: 343 HLEYNRFTTLPEE-IGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKE 401

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I     L   Y+ NN L+ LP E+G+L  L  LDL  NQL     E   L RL  L L N
Sbjct: 402 IGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKN 461

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           N L  L  EIG++  L+ L L+GNP  T    +V
Sbjct: 462 NQLRTLSQEIGQLQNLKDLDLSGNPFTTFPQEIV 495



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/355 (32%), Positives = 174/355 (49%), Gaps = 15/355 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           DL++L LA+N +  L +++  L  L  L+V +N+L  LP  IG+L  LK L +++N +  
Sbjct: 154 DLEELNLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLAYNQLTT 213

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +  +NQL  LP  +G   NL     +NN + +LP+++    K+  L
Sbjct: 214 LPKEIGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTLPKEIGTLQKLEWL 273

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  + N L  +P+ IG L  L  L L  NR+ S P  
Sbjct: 274 YLTNNQLATLPQE-IGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKE 332

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    +L   ++  N  + LP E+G L +L  L+L  NQL     E  +L RL  L+L N
Sbjct: 333 IGTLSNLQRLHLEYNRFTTLPEEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYN 392

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EIG +  L+ L L  N L TL   +        L+ L+    +  D++  T 
Sbjct: 393 NRLATLPKEIGTLRKLQHLYLANNQLATLPKEI------GQLQNLKDL--DLSDNQLVTL 444

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            E++ T+  RL      LSL+   L  +  EI +   +  LDLS N     P E+
Sbjct: 445 PEEIGTLQ-RLEW----LSLKNNQLRTLSQEIGQLQNLKDLDLSGNPFTTFPQEI 494



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 192/397 (48%), Gaps = 29/397 (7%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           + Y++F+EA +       +D++ L L +N +     ++  L  L  L++++N+L  LP  
Sbjct: 25  KFYRDFNEALKN-----PMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKE 79

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           I  L  LK L +S N +  +P EIG+   L   D   NQL+ LPS +G+  +L      +
Sbjct: 80  IETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEH 139

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N + +LP+++     + +L++  N+L +LS   I +   L +L    N L  +P+ IG L
Sbjct: 140 NQLITLPQEIGTLQDLEELNLANNQLRILSKE-IGTLQHLQDLSVFNNQLITLPQEIGKL 198

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  L L  N++ ++P  I    +L +  + NN L  LP E+G L  L +L+L +N+L 
Sbjct: 199 QNLKYLRLAYNQLTTLPKEIGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLV 258

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
               E   L +L  L L+NN L+ LP EIGK+  L  L LT N L++L   +        
Sbjct: 259 TLPKEIGTLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQEI------GK 312

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE----------------LSLEGMNL 369
           L+ L+  + EN   E+   +   ++   RL +                    L+LE   L
Sbjct: 313 LQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPEEIGTLHRLPWLNLEHNQL 372

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           + +P EI     +  L+L  N +  LP E+ +   LQ
Sbjct: 373 TTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQ 409



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 34/225 (15%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           L L+N  L+ +P E+ K  N  E    +   E+         +LQ+L L +N    L E+
Sbjct: 296 LGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPEE 355

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  LN+ HN+L+ LP  IG L  L+ L++  N +  +P EIG+   L     ++
Sbjct: 356 IGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLAN 415

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL D   S+N + +LPE++    ++  L ++ N+L  LS       
Sbjct: 416 NQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLS------- 468

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
                            + IG L  L  LDL  N   + P  I G
Sbjct: 469 -----------------QEIGQLQNLKDLDLSGNPFTTFPQEIVG 496


>gi|195110491|ref|XP_001999813.1| GI22874 [Drosophila mojavensis]
 gi|193916407|gb|EDW15274.1| GI22874 [Drosophila mojavensis]
          Length = 1865

 Score =  153 bits (386), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 105/307 (34%), Positives = 159/307 (51%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++ K+               LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-KHLQS------------LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I     LT+L  ++
Sbjct: 195 GYLPGLQELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-IGGMVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G ++
Sbjct: 254 NLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCVNMQELILTENFLSELPASIGNMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  145 bits (365), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 117/365 (32%), Positives = 173/365 (47%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D    +++  L+
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLE 158

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +                         +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 159 LR------------------------ENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E    + L+ LDL+ N
Sbjct: 195 GYLPGLQELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL---VNGPTPALLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L   VN     L +   S LP +      
Sbjct: 255 LLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCVNMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+LS     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGNMTKLS----NLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  127 bits (318), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 75/239 (31%), Positives = 134/239 (56%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L+ L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLQELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +G  ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG++++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCVNMQELILTENFLSELPASIGNMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEIGG-------------MVSLTDLDLAQNLLETLPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG+ T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCVNMQELILTENFLSELPASIGNMTKLSNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W    +
Sbjct: 333 GQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSENQ 392

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 393 ---SQPLLTFQPDT 403



 Score = 46.6 bits (109), Expect = 0.021,   Method: Composition-based stats.
 Identities = 44/177 (24%), Positives = 76/177 (42%), Gaps = 14/177 (7%)

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L E ++  N +  LP    +L++L  L L  N++     +      L  LD+S N +  
Sbjct: 38  TLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPD 97

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           +P +I  + +L+    + NP+  L S         +L           D   +T   D  
Sbjct: 98  IPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL--------NDMSLTTLPADFG 149

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           ++ T+L    + L L    L  +P  I +  ++ +LDL  N I++LPP L     LQ
Sbjct: 150 SL-TQL----ESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLQ 201


>gi|418741977|ref|ZP_13298350.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410750335|gb|EKR07315.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 379

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/270 (35%), Positives = 154/270 (57%), Gaps = 4/270 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L +N +  L  ++  L  L VL++  N+L+ LP  IG+L  L+ L++ FN +  
Sbjct: 72  NLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PDE+G    L   +   N+L  LP  +G+  NL    +  N +T+ P+++    K+ +L
Sbjct: 132 LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQEL 191

Query: 166 DVEGNKLTVLSNNLIASWTM-LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           ++  N+LT L   ++    + + +LI+  N L  +P+ IG LS+L +L L+ N++ ++P 
Sbjct: 192 NLGFNRLTTLREEVVQLQNLQILDLIS--NPLTTLPKEIGQLSKLQKLYLYGNQLTTLPE 249

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I     L E Y+GNN L  LP E+ +L KL TL L  NQ+  +  E  QL+ L  L+L 
Sbjct: 250 EIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLG 309

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            N L+ LP EIG++  L++L L  N L TL
Sbjct: 310 FNQLTTLPQEIGQLQNLQELNLEFNQLATL 339



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 165/334 (49%), Gaps = 15/334 (4%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N     +LN+S +KL+ L   IG+L  L+ L +++N +  +P+EIG    L   
Sbjct: 40  LTEALQNPKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVL 99

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D  SN+L  LP  +G+  NL       N +T LP+++     +  L+++ NKLT+L    
Sbjct: 100 DLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEK- 158

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L  L +  N L   P+ IG L +L  L+L  NR+ ++   +    +L    + +
Sbjct: 159 IGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLIS 218

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L+ LP E+G+LSKL  L L+ NQL     E  QL +L  L L NN L  LP EI ++ 
Sbjct: 219 NPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQ 278

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L+ L L GN + T          P  +  L++    N      TT    I     L   
Sbjct: 279 KLQTLYLEGNQITTF---------PKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNL--- 326

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
            +EL+LE   L+ +P E+ +  ++ KL+L  N I
Sbjct: 327 -QELNLEFNQLATLPKEVGQLQKLRKLNLYNNPI 359



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 1/225 (0%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D+  +  +LQ L L  N +  L E +  L  L +LN   N+L+  P  IG+L  L+ L++
Sbjct: 134 DEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNL 193

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
            FN +  + +E+     L   D  SN L  LP  +G+   L       N +T+LPE++  
Sbjct: 194 GFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQ 253

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             K+ +L +  N L  L    I     L  L    N +   P+ IG L  L  L+L  N+
Sbjct: 254 LKKLQELYLGNNPLRTLPKE-IEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQ 312

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           + ++P  I    +L E  +  N L+ LP E+G+L KL  L+L++N
Sbjct: 313 LTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNN 357



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 123/260 (47%), Gaps = 15/260 (5%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           +L E L +      L++ G+KL  LS   I     L +L  + N L  +P  IG L  L 
Sbjct: 39  NLTEALQNPKDARILNLSGSKLATLSKE-IGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQ 97

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            LDL+ N +  +P  I    +L    +G N L+ LP E+G+L  L  L+L  N+L     
Sbjct: 98  VLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPE 157

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +  QL+ L +L+   N L+  P EIG++  L++L L  N L TLR  +V      +L  +
Sbjct: 158 KIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLI 217

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
                    S   TT    I   ++L    ++L L G  L+ +P EI +  ++ +L L  
Sbjct: 218 ---------SNPLTTLPKEIGQLSKL----QKLYLYGNQLTTLPEEIGQLKKLQELYLGN 264

Query: 390 NSIQELPPELSSCASLQVKF 409
           N ++ LP E+     LQ  +
Sbjct: 265 NPLRTLPKEIEQLQKLQTLY 284



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L L +N +  L +++  L  L  L +  N+++  P  IG+L  L+ L++ FN +  +
Sbjct: 257 LQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTL 316

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           P EIG    L + +   NQL  LP  +G+   L      NN I S
Sbjct: 317 PQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIAS 361


>gi|255072337|ref|XP_002499843.1| predicted protein [Micromonas sp. RCC299]
 gi|226515105|gb|ACO61101.1| predicted protein [Micromonas sp. RCC299]
          Length = 412

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 190/350 (54%), Gaps = 17/350 (4%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LNV+ N L+ LPA IG+L  L+ L ++ N +  +P +IG  T+L +     N+L  +P+ 
Sbjct: 33  LNVARNALTLLPAEIGQLTSLRELCLTGNQLTSVPADIGQLTSLERLWLHGNRLTSVPAE 92

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+   L +     N +TS+PE++   + ++ L +  N+LT L    I   T LTEL  +
Sbjct: 93  IGQFAALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAE-IGQLTALTELNLT 151

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +N L  +P  IG L+ L++L+L +N++ ++P+      SL E Y+ +N L+++PA++G+L
Sbjct: 152 ENQLTNVPAEIGQLTSLVKLNLTKNQLTNVPAEFWRLTSLGELYLDDNRLTSVPADIGQL 211

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           + L  L L+ NQL     E  QL  L +L LS+N L+ +P EI ++ +L +L L+GN L 
Sbjct: 212 TSLTWLGLYGNQLTSVPAEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLT 271

Query: 312 T--LRSSLVNGPTPALLKYLR-SRLPENEDSEASTTKEDLITMATRLSVTSKEL----SL 364
           +  L    +   T   L Y + + LP   +    T+ E L     RL+    E+    SL
Sbjct: 272 SVPLEIGQLTAMTELYLSYNQLTSLP--AEIGQLTSLEKLYLGDNRLTSVPAEIGQLTSL 329

Query: 365 EGM-----NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            G+      L+++P+EI +   +    L RN +  LP E+    SL V+F
Sbjct: 330 WGLYLNDNQLTSVPAEIGQLTSLEIFQLERNQLTSLPTEVGQLTSL-VEF 378



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/287 (35%), Positives = 160/287 (55%), Gaps = 5/287 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N +  + E++  L  LT L++  N+L+ LPA IG+L  L  L+++ N +  +
Sbjct: 99  LIELWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAEIGQLTALTELNLTENQLTNV 158

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+LVK + + NQL  +P+   R  +L +    +N +TS+P D+   + ++ L 
Sbjct: 159 PAEIGQLTSLVKLNLTKNQLTNVPAEFWRLTSLGELYLDDNRLTSVPADIGQLTSLTWLG 218

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+LT +    I   T L  L  S N L  +P  I  L  L RLDL  N++ S+P  I
Sbjct: 219 LYGNQLTSVPAE-IGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPLEI 277

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               ++ E Y+  N L++LPAE+G+L+ L  L L  N+L     E  QL  L  L L++N
Sbjct: 278 GQLTAMTELYLSYNQLTSLPAEIGQLTSLEKLYLGDNRLTSVPAEIGQLTSLWGLYLNDN 337

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY-LRS 331
            L+ +P EIG++T+L    L  N L +L + +  G   +L+++ LRS
Sbjct: 338 QLTSVPAEIGQLTSLEIFQLERNQLTSLPTEV--GQLTSLVEFRLRS 382



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 189/379 (49%), Gaps = 27/379 (7%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N +  +  D+  L  L  L +  N+L+ +PA IG+   L  L +  N +  +
Sbjct: 53  LRELCLTGNQLTSVPADIGQLTSLERLWLHGNRLTSVPAEIGQFAALIELWLWGNKLTSV 112

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EIG  T+L      SNQL  LP+ +G+   L++   + N +T++P ++   + + KL+
Sbjct: 113 PEEIGQLTSLTYLHLGSNQLTSLPAEIGQLTALTELNLTENQLTNVPAEIGQLTSLVKLN 172

Query: 167 VEGNKLTVLSNNLIASW---TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +  N+LT    N+ A +   T L EL    N L  +P  IG L+ L  L L+ N++ S+P
Sbjct: 173 LTKNQLT----NVPAEFWRLTSLGELYLDDNRLTSVPADIGQLTSLTWLGLYGNQLTSVP 228

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
           + I    SL    + +N L+++PAE+ +L  L  LDL  NQL    +E  QL  ++ L L
Sbjct: 229 AEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPLEIGQLTAMTELYL 288

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--RLPENEDSE 340
           S N L+ LP EIG++T+L KL L  N L ++         PA +  L S   L  N++  
Sbjct: 289 SYNQLTSLPAEIGQLTSLEKLYLGDNRLTSV---------PAEIGQLTSLWGLYLNDNQL 339

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL- 399
            S   E  I   T L +      LE   L+++P+E+ +   + +  L  N +  +P  + 
Sbjct: 340 TSVPAE--IGQLTSLEI----FQLERNQLTSLPTEVGQLTSLVEFRLRSNQLTSVPAAIL 393

Query: 400 -SSCASLQVKFSDLVTNKE 417
               A   V   D VT  E
Sbjct: 394 ELEAAGCDVDLDDGVTVDE 412



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 14/243 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+   L +VP E             +W    L +L L  N +  +  D+  L  LT L
Sbjct: 171 LNLTKNQLTNVPAE-------------FWRLTSLGELYLDDNRLTSVPADIGQLTSLTWL 217

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L+ +PA IG+L  L+ L +S N +  +P EI    +L + D S NQL  +P  +
Sbjct: 218 GLYGNQLTSVPAEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPLEI 277

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+   +++   S N +TSLP ++   + + KL +  N+LT +    I   T L  L  + 
Sbjct: 278 GQLTAMTELYLSYNQLTSLPAEIGQLTSLEKLYLGDNRLTSVPAE-IGQLTSLWGLYLND 336

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L    L +N++ S+P+ +    SL EF + +N L+++PA + +L 
Sbjct: 337 NQLTSVPAEIGQLTSLEIFQLERNQLTSLPTEVGQLTSLVEFRLRSNQLTSVPAAILELE 396

Query: 254 KLG 256
             G
Sbjct: 397 AAG 399



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 107/217 (49%), Gaps = 14/217 (6%)

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
           +A   L   +P  +G L+ L  L++ +N +  +P+ I    SL E  +  N L+++PA++
Sbjct: 11  LADCGLTGAVPAEVGRLTALRELNVARNALTLLPAEIGQLTSLRELCLTGNQLTSVPADI 70

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L+ L  L LH N+L     E  Q   L  L L  N L+ +P EIG++T+L  L L  N
Sbjct: 71  GQLTSLERLWLHGNRLTSVPAEIGQFAALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSN 130

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +  G   AL +     L EN+ +        L ++  +L++T  +       
Sbjct: 131 QLTSLPAEI--GQLTALTEL---NLTENQLTNVPAEIGQLTSLV-KLNLTKNQ------- 177

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           L+ +P+E W    + +L L  N +  +P ++    SL
Sbjct: 178 LTNVPAEFWRLTSLGELYLDDNRLTSVPADIGQLTSL 214


>gi|332017140|gb|EGI57939.1| Leucine-rich repeat protein soc-2-like protein [Acromyrmex
           echinatior]
          Length = 615

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 187/396 (47%), Gaps = 63/396 (15%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D  ++   L  L L  N ++ +K ++ NL  LT+L+   NK+ ELPA IGEL  L + DV
Sbjct: 220 DVVYKLTSLTTLFLRFNRVKYVKNNICNLTNLTMLSFRENKIKELPAGIGELVNLLTFDV 279

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N +  +P EIG    L   D   N+L +LP ++G  ++L+      N +TS+P+ LA+
Sbjct: 280 SHNHLEHLPPEIGKCVQLSTLDVQHNELLDLPDTIGNLVSLTRLGIRYNKLTSIPKSLAN 339

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE----------------- 201
           C  M +  VEGN+++ L + L+AS + LT +  S+NL    P                  
Sbjct: 340 CKLMDEFSVEGNQISHLPDGLLASLSYLTTITLSRNLFTSYPAGGPGQFVNAYSINVEHN 399

Query: 202 -----TIGSLSR---LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                  G  SR   L +L++ +N++ ++P  I    ++ E  +G N L+ LP ++  L 
Sbjct: 400 EIDKIPYGIFSRSKNLTKLNMKENKLNTLPLDIGSWVAMVELNLGTNQLTKLPDDIQCLQ 459

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L +N LK        L +L VLDL  N +  LP EIG MT L+KL+L  N L  
Sbjct: 460 SLEILILSNNGLKHIPTTIVNLQKLRVLDLEENYIDVLPNEIGLMTELQKLILQSNKLTE 519

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L         P  + +LR+                     T LSV   +       L+ +
Sbjct: 520 L---------PRTIGHLRN--------------------LTYLSVGENQ-------LTYL 543

Query: 373 PSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           P E+     +  L L+ N S+  LP EL+ C +L +
Sbjct: 544 PEEVGTLESLESLYLNDNKSLHNLPFELALCKNLGI 579



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 14/196 (7%)

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           RLDL +  I ++PSS+     L EFY+  N L+ LP E+G LS L TL L  N L     
Sbjct: 138 RLDLSKACITTLPSSVKELKHLREFYLYGNKLTTLPPEIGYLSNLETLALSENSLTNLPN 197

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
               L+ L VLDL +N L  +P  + K+T+L  L L  N ++ +++++ N     +L + 
Sbjct: 198 TLENLKSLRVLDLRHNKLIVIPDVVYKLTSLTTLFLRFNRVKYVKNNICNLTNLTMLSF- 256

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
                EN+  E      +L+ + T          +   +L  +P EI +  +++ LD+  
Sbjct: 257 ----RENKIKELPAGIGELVNLLT--------FDVSHNHLEHLPPEIGKCVQLSTLDVQH 304

Query: 390 NSIQELPPELSSCASL 405
           N + +LP  + +  SL
Sbjct: 305 NELLDLPDTIGNLVSL 320



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 30/222 (13%)

Query: 34  EAGEGDK-----WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
           E  E DK     +  + +L KL +  N +  L  D+ +   +  LN+  N+L++LP  I 
Sbjct: 397 EHNEIDKIPYGIFSRSKNLTKLNMKENKLNTLPLDIGSWVAMVELNLGTNQLTKLPDDIQ 456

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+ L +S N +  IP  I +   L   D   N +  LP+ +G    L      +N 
Sbjct: 457 CLQSLEILILSNNGLKHIPTTIVNLQKLRVLDLEENYIDVLPNEIGLMTELQKLILQSNK 516

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T LP  +     ++ L V  N+LT L                        PE +G+L  
Sbjct: 517 LTELPRTIGHLRNLTYLSVGENQLTYL------------------------PEEVGTLES 552

Query: 209 LIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSALPAEL 249
           L  L L+ N+ L ++P  ++ C +L    + N  LS +P E+
Sbjct: 553 LESLYLNDNKSLHNLPFELALCKNLGIMSIENCPLSHIPMEI 594


>gi|398341356|ref|ZP_10526059.1| hypothetical protein LkirsB1_19555 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 400

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 157/299 (52%), Gaps = 15/299 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL    L  +PNE+              + ++LQ L L HN +  L +++  L  L V
Sbjct: 96  TLNLDTNQLTTLPNEI-------------GQLINLQTLDLIHNQLVILPKEINQLQNLRV 142

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S+N+L  LP  IG+L  L++LD+  N +  +P+EIG    L   D S N L  LP  
Sbjct: 143 LGLSNNQLKILPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKE 202

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +   S+N + +LP+++     +  L +  N+LT L N  I     L EL   
Sbjct: 203 IGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNE-IGQLKNLYELYLG 261

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           KNLL  +P+ +G L  L  LDL  N+   IP+ I    +L    + NN  +ALP E+ +L
Sbjct: 262 KNLLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQL 321

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L  L L++NQLK    E  +L+ L VLDL++N L  LP EI K+  L+ L L  N L
Sbjct: 322 QNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPNEIEKLQNLQVLDLRNNEL 380



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 157/314 (50%), Gaps = 15/314 (4%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           + + LK       L+LS + L+ +P E+              +  +LQ L L +N +  L
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEI-------------GQLQNLQTLYLWNNQLTTL 84

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
             ++  L  L  LN+  N+L+ LP  IG+L  L++LD+  N ++ +P EI     L    
Sbjct: 85  PNEIGQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLG 144

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S+NQLK LP  +G+  NL       N + +LP ++     +  LD+  N LT+L    I
Sbjct: 145 LSNNQLKILPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKE-I 203

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                L EL  S N L  +P+ IG L  L  L L  N++ ++P+ I    +L E Y+G N
Sbjct: 204 GQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKN 263

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L+ LP E+G+L  L  LDL  NQ K    E  QL+ L  L L NN  + LP EI ++  
Sbjct: 264 LLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQLQN 323

Query: 300 LRKLLLTGNPLRTL 313
           L+ L L  N L+TL
Sbjct: 324 LQVLFLNNNQLKTL 337



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 166/338 (49%), Gaps = 17/338 (5%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG+L  L++L +  N +  +P+EIG    L   +  +NQL  LP+
Sbjct: 50  VLDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTTLPN 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+ +NL      +N +  LP+++     +  L +  N+L +L    I     L  L  
Sbjct: 110 EIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKE-IGQLENLQTLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P  IG L  L  LDL +N +  +P  I    +L E Y+ +N L  LP E+G+
Sbjct: 169 YTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQ 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL L  NQL     E  QL+ L  L L  N L+ LP E+G++  L+ L L  N  
Sbjct: 229 LENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLGYNQF 288

Query: 311 RTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           + + + +        L+ LR+ RL  N+ +  +  KE  I     L V    L L    L
Sbjct: 289 KIIPNEI------EQLQNLRTLRLRNNQFT--ALPKE--IRQLQNLQV----LFLNNNQL 334

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             +P+EI +   +  LDL+ N ++ LP E+    +LQV
Sbjct: 335 KTLPNEIEKLQNLQVLDLNDNQLKTLPNEIEKLQNLQV 372



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 141/303 (46%), Gaps = 37/303 (12%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S  +LK LP  +G+  NL      NN +T+LP ++     +  L+++ N+LT L   
Sbjct: 51  LDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTTL--- 107

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                                P  IG L  L  LDL  N+++ +P  I+   +L    + 
Sbjct: 108 ---------------------PNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLS 146

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
           NN L  LP E+G+L  L TLDL++NQLK    E  QL+ L  LDLS N L+ LP EIG++
Sbjct: 147 NNQLKILPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQL 206

Query: 298 TTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKE-----DLI 349
             LR+L L+ N L+TL      L N  T  L     + LP NE  +     E     +L+
Sbjct: 207 KNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLP-NEIGQLKNLYELYLGKNLL 265

Query: 350 TMATRLSVTSKELSLE--GMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           T   +     K L +   G N    IP+EI +   +  L L  N    LP E+    +LQ
Sbjct: 266 TTLPKEVGQLKNLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQLQNLQ 325

Query: 407 VKF 409
           V F
Sbjct: 326 VLF 328



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 113/253 (44%), Gaps = 35/253 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LSN  L+ +P E+              +  +LQ L L  N ++ L  ++  L  L  L
Sbjct: 143 LGLSNNQLKILPKEI-------------GQLENLQTLDLYTNQLKALPNEIGQLKNLQTL 189

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N L+ LP  IG+L  L+ L +S N +  +P EIG    L     S NQL  LP+ +
Sbjct: 190 DLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEI 249

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-------------- 179
           G+  NL +     N +T+LP+++     +  LD+  N+  ++ N +              
Sbjct: 250 GQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRNN 309

Query: 180 --------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                   I     L  L  + N L  +P  I  L  L  LDL+ N++ ++P+ I    +
Sbjct: 310 QFTALPKEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPNEIEKLQN 369

Query: 232 LAEFYMGNNALSA 244
           L    + NN LS+
Sbjct: 370 LQVLDLRNNELSS 382



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 13/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS+  L  +PNE+       G+    +E      L L  N +  L +++  L  L +
Sbjct: 234 TLHLSDNQLTTLPNEI-------GQLKNLYE------LYLGKNLLTTLPKEVGQLKNLKM 280

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ +N+   +P  I +L  L++L +  N    +P EI     L     ++NQLK LP+ 
Sbjct: 281 LDLGYNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQLQNLQVLFLNNNQLKTLPNE 340

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           + +  NL     ++N + +LP ++     +  LD+  N+L+
Sbjct: 341 IEKLQNLQVLDLNDNQLKTLPNEIEKLQNLQVLDLRNNELS 381


>gi|390347474|ref|XP_798409.3| PREDICTED: leucine-rich repeat protein SHOC-2-like
           [Strongylocentrotus purpuratus]
          Length = 550

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 201/402 (50%), Gaps = 38/402 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L+++P  VYK              + L  L L  N I ++ ED+ NL  LT+L
Sbjct: 135 LDLRHNKLKEIPEVVYK-------------LLSLTTLFLRFNRITQVGEDIHNLTKLTML 181

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+  LP  +G+L +L + DVS N +  +P+EIG+ T L   D   N+L +LP + 
Sbjct: 182 SLRENKIKALPRGVGKLTLLTTFDVSHNHLEHLPEEIGNCTQLSSLDLQHNELLDLPETT 241

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    LS      N +T +P+ L++C  + + +VEGN + +L   L+ S   LT +  S+
Sbjct: 242 GNLKCLSRLGLRYNRLTGIPKSLSNCVNLEEFNVEGNNIGILPEGLLCSLNKLTSICLSR 301

Query: 194 NLLNGMPETIGSLSRLIRLD---LHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G   +   +D   +  N+I  IP  I S    L +  M +N L+ALP ++
Sbjct: 302 NNFTAYP--VGGPQQFATVDTINMDHNQINKIPFGIFSRSKYLTKLNMKDNQLTALPLDV 359

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
              + +  L+L +NQ+ +   +   L  L VL LSNN L  LP  IG ++ LR+L L  N
Sbjct: 360 NSWTSMVELNLGTNQISKLPEDIEHLTSLEVLILSNNLLRRLPTRIGNLSRLRELDLEEN 419

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM- 367
            L  L         P+ L YL+      E  + S     L  +   +   S  + L+   
Sbjct: 420 RLEAL---------PSELAYLK------ELQKLSVQTNQLTQLPRSIGRLSNLVYLKAGE 464

Query: 368 -NLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
            NL+++P EI    ++ +L ++ N ++  LP EL+ C+SLQ+
Sbjct: 465 NNLASLPEEIGSLEQLQQLYINDNLNLNHLPFELALCSSLQI 506



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 119/377 (31%), Positives = 188/377 (49%), Gaps = 44/377 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L  N++  L E+L  L LL VL++ HNKL E+P  + +L  L +L + FN I +
Sbjct: 108 NLERLALNENSLTTLPEELEKLGLLKVLDLRHNKLKEIPEVVYKLLSLTTLFLRFNRITQ 167

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + ++I + T L       N++K LP  +G+   L+ F  S+N +  LPE++ +C+++S L
Sbjct: 168 VGEDIHNLTKLTMLSLRENKIKALPRGVGKLTLLTTFDVSHNHLEHLPEEIGNCTQLSSL 227

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N+L                          +PET G+L  L RL L  NR+  IP S
Sbjct: 228 DLQHNELL------------------------DLPETTGNLKCLSRLGLRYNRLTGIPKS 263

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LDL 282
           +S C +L EF +  N +  LP   L  L+KL ++ L  N    Y V   Q   +V  +++
Sbjct: 264 LSNCVNLEEFNVEGNNIGILPEGLLCSLNKLTSICLSRNNFTAYPVGGPQQFATVDTINM 323

Query: 283 SNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR----SRLPENE 337
            +N ++ +P  I  +   L KL +  N L  L    VN  T  +   L     S+LP  E
Sbjct: 324 DHNQINKIPFGIFSRSKYLTKLNMKDNQLTALPLD-VNSWTSMVELNLGTNQISKLP--E 380

Query: 338 DSEASTTKEDLI-------TMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           D E  T+ E LI        + TR+   S  +EL LE   L A+PSE+    E+ KL + 
Sbjct: 381 DIEHLTSLEVLILSNNLLRRLPTRIGNLSRLRELDLEENRLEALPSELAYLKELQKLSVQ 440

Query: 389 RNSIQELPPELSSCASL 405
            N + +LP  +   ++L
Sbjct: 441 TNQLTQLPRSIGRLSNL 457


>gi|421110794|ref|ZP_15571285.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803891|gb|EKS10018.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 558

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 188/384 (48%), Gaps = 36/384 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           DL++L L +N +  L +++  L  L  LN+++N+L  LP  IG L  L+ L+V  N ++ 
Sbjct: 132 DLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLIT 191

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L     + NQL  LP  +GR  NL D    NN + +LP+++     +  L
Sbjct: 192 LPQEIGTLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSL 251

Query: 166 DVEGNKLTV---------------LSNNLIAS-------WTMLTELIASKNLLNGMPETI 203
           ++E N+L                 L+NN +A+          L  L  + N L  +P+ I
Sbjct: 252 NLENNRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLANNQLKSLPQEI 311

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L  L  L L  NR+ S P  I    +L   ++  N  + LP E+G L +L  L+L  N
Sbjct: 312 GKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNGFTTLPQEIGTLHRLPWLNLEHN 371

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           QL     E  +L RL  L+L NN L+ LP EIG +  L+ L L  N L TL   +     
Sbjct: 372 QLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLANNQLATLPKEI----- 426

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
              L+ L     + E ++ +T  E + T+  RL      LSL+   L+ +P EI    +I
Sbjct: 427 -GQLQNLEDL--DLEYNQLATLPEAIGTLQ-RLEW----LSLKNNQLTTLPEEIGTLQKI 478

Query: 383 TKLDLSRNSIQELPPELSSCASLQ 406
            KL+L+ N ++ LP E+    +L+
Sbjct: 479 VKLNLANNQLRTLPQEIGQLQNLK 502



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 173/367 (47%), Gaps = 16/367 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           DL++L LA+N +  L +++  L  L  LNV +N+L  LP  IG L  LK L +++N +  
Sbjct: 155 DLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTT 214

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +  +NQL  LP  +G   NL      NN + +LP+++    K+  L
Sbjct: 215 LPKEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWL 274

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  + N L  +P+ IG L  L  L L  NR+ S P  
Sbjct: 275 YLTNNQLATLPKE-IGKLQRLEWLGLANNQLKSLPQEIGKLQNLKELILENNRLESFPKE 333

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    +L   ++  N  + LP E+G L +L  L+L  NQL     E  +L RL  L+L N
Sbjct: 334 IGTLSNLQRLHLEYNGFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYN 393

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL----LKYLR-SRLPE---- 335
           N L+ LP EIG +  L+ L L  N L TL   +  G    L    L+Y + + LPE    
Sbjct: 394 NRLATLPKEIGTLRKLQHLYLANNQLATLPKEI--GQLQNLEDLDLEYNQLATLPEAIGT 451

Query: 336 -NEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
                  S     L T+   +    K  +L+L    L  +P EI +   +  LDLS N  
Sbjct: 452 LQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRTLPQEIGQLQNLKDLDLSGNPF 511

Query: 393 QELPPEL 399
              P E+
Sbjct: 512 TTFPQEI 518



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 148/297 (49%), Gaps = 25/297 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L + +N +  L +++  L  L  LN+ +N+L  LP  IG L  L+ L ++ N +  
Sbjct: 224 NLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLAT 283

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L     ++NQLK LP  +G+  NL +    NN + S P+++   S + +L
Sbjct: 284 LPKEIGKLQRLEWLGLANNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRL 343

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +E N  T L    I +   L  L    N L  +P+ IG L RL  L+L+ NR+ ++P  
Sbjct: 344 HLEYNGFTTLPQE-IGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKE 402

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL-------------KEYCVEA 272
           I     L   Y+ NN L+ LP E+G+L  L  LDL  NQL             +   ++ 
Sbjct: 403 IGTLRKLQHLYLANNQLATLPKEIGQLQNLEDLDLEYNQLATLPEAIGTLQRLEWLSLKN 462

Query: 273 CQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            QL           ++  L+L+NN L  LP EIG++  L+ L L+GNP  T    +V
Sbjct: 463 NQLTTLPEEIGTLQKIVKLNLANNQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIV 519



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 190/397 (47%), Gaps = 25/397 (6%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L +N +  L +++  L  L  L +S N+L+ LP  IG+L  L+ L +  N +  IP E
Sbjct: 67  LYLENNQLTTLPQEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQE 126

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           IG+   L +    +NQL  LP  +G   +L +   +NN + +LP+++     +  L+V  
Sbjct: 127 IGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFN 186

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+L  L    I +   L  L  + N L  +P+ IG L  L  L++  N+++++P  I   
Sbjct: 187 NQLITLPQE-IGTLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNVFNNQLITLPQEIGTL 245

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLS 288
            +L    + NN L  LP E+G L KL  L L +NQL     E  +L RL  L L+NN L 
Sbjct: 246 QNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLANNQLK 305

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSL------------VNGPT--PALLKYLRSRLP 334
            LP EIGK+  L++L+L  N L +    +             NG T  P  +  L  RLP
Sbjct: 306 SLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNGFTTLPQEIGTLH-RLP 364

Query: 335 E-NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
             N +    TT    I    RL      L+L    L+ +P EI    ++  L L+ N + 
Sbjct: 365 WLNLEHNQLTTLPQEIGRLERLEW----LNLYNNRLATLPKEIGTLRKLQHLYLANNQLA 420

Query: 394 ELPPELSSCASLQ---VKFSDLVTNKESCISGCYLYW 427
            LP E+    +L+   ++++ L T  E+  +   L W
Sbjct: 421 TLPKEIGQLQNLEDLDLEYNQLATLPEAIGTLQRLEW 457



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 139/309 (44%), Gaps = 24/309 (7%)

Query: 2   DRILKAARTSGSLN------LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHN 55
           +R++   +  G+L       L+N  L  +P E+ K                L+ L LA+N
Sbjct: 256 NRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGK-------------LQRLEWLGLANN 302

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
            ++ L +++  L  L  L + +N+L   P  IG L  L+ L + +N    +P EIG+   
Sbjct: 303 QLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNGFTTLPQEIGTLHR 362

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L   +   NQL  LP  +GR   L      NN + +LP+++    K+  L +  N+L  L
Sbjct: 363 LPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLANNQLATL 422

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
               I     L +L    N L  +PE IG+L RL  L L  N++ ++P  I     + + 
Sbjct: 423 PKE-IGQLQNLEDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKL 481

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIG 295
            + NN L  LP E+G+L  L  LDL  N    +  E       +  L    L  +P  + 
Sbjct: 482 NLANNQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIV----GLKHLKILKLKKIPALLS 537

Query: 296 KMTTLRKLL 304
           K  T+RKLL
Sbjct: 538 KKETIRKLL 546


>gi|158286480|ref|XP_308777.4| AGAP006993-PA [Anopheles gambiae str. PEST]
 gi|157020488|gb|EAA04662.4| AGAP006993-PA [Anopheles gambiae str. PEST]
          Length = 626

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 174/344 (50%), Gaps = 19/344 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDK--------------WWEAVDLQKL 50
           +K A  SG LNLS + L  VP +V+ N  ++ E +K              WW    L  L
Sbjct: 39  IKQALKSGVLNLSGKGLATVPEKVW-NLSDSDENEKEVRYDLERTNDEESWWNQRSLTSL 97

Query: 51  ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI 110
            L+ N +  + E+++NL  LTVLN+  N L+ LPA IG L  L    V+ N + ++P+  
Sbjct: 98  DLSSNTLTTISENIQNLVDLTVLNLQDNALTSLPAGIGALTKLTKFSVARNKLTELPESF 157

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
                L   + S N+  E+  ++   + L     S N I +LP  +    ++ +L +  N
Sbjct: 158 FQLKELKHLNLSHNEFAEMNPNISDLIMLETLDVSFNSINALPGGVGFLVRLQQLTLSNN 217

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
            LT L N+ I +   L +L  +KN L  +P  +G L RL    +  N I  +P   +GC 
Sbjct: 218 HLTELPND-IVNLRKLQKLDLAKNDLKKLPPVMGELRRLECFYVQHNDIDELP-DFTGCE 275

Query: 231 SLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLS 288
           +L E ++ NN +  LP +  + L +L  LDL  N++++   E   L  L+ LDLSNN++S
Sbjct: 276 ALKELHISNNYIKTLPGDFCENLPQLKVLDLRDNKIEKLPDEIALLASLTRLDLSNNTIS 335

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
            LP  +  +  L  L + GNP+R++R  ++   T  +LK LR R
Sbjct: 336 SLPSCLSTLAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTLRER 379



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 4/175 (2%)

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           +D+  NKLT + + +    ++LTEL  S NLL  +P       ++  L+L  N++  +P 
Sbjct: 452 VDISKNKLTAVPSGITHLSSLLTELNVSFNLLQTVPAFFSQFDKISYLNLSNNQMTDLPE 511

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVL 280
            +    +L E  + +N L  +P  + +L  L  L    NQ++E       L    RL+ L
Sbjct: 512 VVGLLVTLRELNVISNQLKRIPDCVYELRGLEILLASGNQIEEIDATESGLGALKRLATL 571

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           DL+NN++  +PP +G +  +  L L GN  R  R  ++   T +++ YLR R+P+
Sbjct: 572 DLANNNIKHVPPVLGTLKNITTLELIGNSFRQPRHQILEKGTESIMSYLRDRIPQ 626



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 28/179 (15%)

Query: 255 LGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           L +LDL SN L     E  Q  + L+VL+L +N+L+ LP  IG +T L K  +  N L  
Sbjct: 94  LTSLDLSSNTLTTIS-ENIQNLVDLTVLNLQDNALTSLPAGIGALTKLTKFSVARNKLTE 152

Query: 313 LRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMAT---------------RLS 356
           L  S         LK L+   L  NE +E +    DLI + T                  
Sbjct: 153 LPESFFQ------LKELKHLNLSHNEFAEMNPNISDLIMLETLDVSFNSINALPGGVGFL 206

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP---ELSSCASLQVKFSDL 412
           V  ++L+L   +L+ +P++I    ++ KLDL++N +++LPP   EL       V+ +D+
Sbjct: 207 VRLQQLTLSNNHLTELPNDIVNLRKLQKLDLAKNDLKKLPPVMGELRRLECFYVQHNDI 265



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 3/106 (2%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           ++ LN+S+N++++LP  +G L  L+ L+V  N + +IPD +     L     S NQ++E+
Sbjct: 496 ISYLNLSNNQMTDLPEVVGLLVTLRELNVISNQLKRIPDCVYELRGLEILLASGNQIEEI 555

Query: 130 ---PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
               S LG    L+    +NN I  +P  L     ++ L++ GN  
Sbjct: 556 DATESGLGALKRLATLDLANNNIKHVPPVLGTLKNITTLELIGNSF 601



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 12/167 (7%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R   +L + +++L D+P  V   F +A E   +   +   KL    + I  L        
Sbjct: 421 RKGRALIVCSKALVDIPEAV---FLDALEACVYNVDISKNKLTAVPSGITHLSS------ 471

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           LLT LNVS N L  +PA   +   +  L++S N +  +P+ +G    L + +  SNQLK 
Sbjct: 472 LLTELNVSFNLLQTVPAFFSQFDKISYLNLSNNQMTDLPEVVGLLVTLRELNVISNQLKR 531

Query: 129 LPSSLGRCLNLSDFKASNNCITSL---PEDLADCSKMSKLDVEGNKL 172
           +P  +     L    AS N I  +      L    +++ LD+  N +
Sbjct: 532 IPDCVYELRGLEILLASGNQIEEIDATESGLGALKRLATLDLANNNI 578


>gi|328768383|gb|EGF78429.1| hypothetical protein BATDEDRAFT_90637 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 632

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 193/352 (54%), Gaps = 25/352 (7%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYK-------------NFDEAGEGDKWWEAVDL 47
           + ++++A+R++G LN+SN  L  +P+EV+              +FD   +   WWE  +L
Sbjct: 41  LQKLIQASRSNGRLNISNLELESIPDEVWGTNAAACQSTVLDVSFDRPLDQGSWWEVCEL 100

Query: 48  QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP 107
           ++L+ A N+I  +   + +L  L +L++ +N++S +P  +G L  L  L++SFN I  +P
Sbjct: 101 KRLVAADNHITAIDPRIADLGALVMLDLHNNQISSIPDVVGSLQALSILNLSFNCITCLP 160

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
           D +     LV+     N L +L  ++G    LS    S+N +++LP  ++  + ++KL+V
Sbjct: 161 DSLFQ-LPLVELHVQGNALVQLSDAIGNLSRLSHLDLSDNKLSALPPSISKMTCLTKLNV 219

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMP----ETIGSLSRLIRLDLHQNRILSIP 223
             N+LT L +  +++   LTEL  S NLL  +     +TI SL +L  LD+  NR+ S+ 
Sbjct: 220 SKNQLTSLESVDLSAIVQLTELNLSYNLLANLSAFSIDTI-SLPKLKILDVKHNRLSSLT 278

Query: 224 SSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
             ++ C  L +  +  N LS++ P     L +L TLDL  N L     +  QL RL  LD
Sbjct: 279 VKLT-CPELVDLCLSFNNLSSIAPGVFFDLIQLETLDLRDNALCVVPDDTLQLHRLKRLD 337

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L+NN++S L PE+G +  L   L+ GNP+R L +      T  LL++L+ R+
Sbjct: 338 LTNNNISRLQPELGLLHNLTMFLVYGNPIRGLPTL---DSTVKLLEHLQKRI 386



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 152/345 (44%), Gaps = 45/345 (13%)

Query: 29  YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
           + N      G  +++ + L+ L L  N +  + +D   L  L  L++++N +S L   +G
Sbjct: 293 FNNLSSIAPG-VFFDLIQLETLDLRDNALCVVPDDTLQLHRLKRLDLTNNNISRLQPELG 351

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATAL------VKFDCSSNQLKELPSS----LGRCLN 138
            LH L    V  N I  +P    +   L      +    SS+Q++  P++    + R ++
Sbjct: 352 LLHNLTMFLVYGNPIRGLPTLDSTVKLLEHLQKRIVIPASSHQIQ--PNANNAVVSRGID 409

Query: 139 LSD------------------------FKASNNCITSLPEDLADCSKM--SKLDVEGNKL 172
            SD                           SN  +  L  D+        S +DV  N+L
Sbjct: 410 QSDSLPPLHHLQQSSVAPSQQEYSSRIMNLSNQGLDVLGGDILSNFDFAPSTIDVSQNRL 469

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
             L N+       +  LIA +NLL   P        L  LDL +N+I  +  S+     L
Sbjct: 470 KNLPNHFNEYSNSVVTLIARQNLLTVFPNI--PFGHLKILDLSRNKITQLSESLPLLPRL 527

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLDLSNNSLSG 289
            E  +  N L  LP++L     L  L + +N+L+    + +  C   + +LD+SNNS+  
Sbjct: 528 DELNLSFNQLVYLPSQLS-FPNLTVLLVSNNRLEAIDPHMLIQCIPGIQILDVSNNSIQT 586

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +PPE+  +  ++ L L+GN  R  R++++   T A+ +YL+SR+P
Sbjct: 587 IPPELALLPCIKSLQLSGNMFRVPRAAILQKGTEAICEYLKSRIP 631



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 108/260 (41%), Gaps = 55/260 (21%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L  L+A+ N +  +   I  L  L+ LDLH N+I SIP  +    +L+   +  N ++ L
Sbjct: 100 LKRLVAADNHITAIDPRIADLGALVMLDLHNNQISSIPDVVGSLQALSILNLSFNCITCL 159

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  L +L  L  L +  N L +       L RLS LDLS+N LS LPP I KMT L KL 
Sbjct: 160 PDSLFQL-PLVELHVQGNALVQLSDAIGNLSRLSHLDLSDNKLSALPPSISKMTCLTKLN 218

Query: 305 LTGNPLRTLRS---------------------------SLVNGPTPALLKYLRSRL---- 333
           ++ N L +L S                             ++ P   +L    +RL    
Sbjct: 219 VSKNQLTSLESVDLSAIVQLTELNLSYNLLANLSAFSIDTISLPKLKILDVKHNRLSSLT 278

Query: 334 -----PE---------NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                PE         N  S A     DLI + T        L L    L  +P +  + 
Sbjct: 279 VKLTCPELVDLCLSFNNLSSIAPGVFFDLIQLET--------LDLRDNALCVVPDDTLQL 330

Query: 380 GEITKLDLSRNSIQELPPEL 399
             + +LDL+ N+I  L PEL
Sbjct: 331 HRLKRLDLTNNNISRLQPEL 350



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 20/181 (11%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEG------------DKWWEAVDLQKLILAHNNI 57
           +S  +NLSN+ L  +  ++  NFD A               + + E  +    ++A  N+
Sbjct: 433 SSRIMNLSNQGLDVLGGDILSNFDFAPSTIDVSQNRLKNLPNHFNEYSNSVVTLIARQNL 492

Query: 58  EKLKEDLRNLPL--LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
             +     N+P   L +L++S NK+++L  ++  L  L  L++SFN ++ +P ++ S   
Sbjct: 493 LTV---FPNIPFGHLKILDLSRNKITQLSESLPLLPRLDELNLSFNQLVYLPSQL-SFPN 548

Query: 116 LVKFDCSSNQLKEL-PSSLGRCL-NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           L     S+N+L+ + P  L +C+  +     SNN I ++P +LA    +  L + GN   
Sbjct: 549 LTVLLVSNNRLEAIDPHMLIQCIPGIQILDVSNNSIQTIPPELALLPCIKSLQLSGNMFR 608

Query: 174 V 174
           V
Sbjct: 609 V 609


>gi|255071327|ref|XP_002507745.1| predicted protein [Micromonas sp. RCC299]
 gi|226523020|gb|ACO69003.1| predicted protein [Micromonas sp. RCC299]
          Length = 419

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 185/361 (51%), Gaps = 15/361 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L  N +  +  ++  L  LT L++  N+L  +PA IG+L  L  L++  N +  +
Sbjct: 30  LRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQLTSLTELNLFDNQLTSV 89

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+LV+ D   N L  +P+ L +  +L      NN +TSLP ++   + + +L 
Sbjct: 90  PAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTSLPAEIGQLTSLKELG 149

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +   +LT L    I   T L E+    N L  +P  IG L+ L +L L+ N++ S+P+ +
Sbjct: 150 LHHIQLTSLPAE-IGQLTSLREVHLYGNQLTSLPAEIGQLTSLEKLYLYGNQLTSVPAEL 208

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               SL E  + +N L+ LPAE+G+L+ L  L L  NQL     E  QL  L+ L+L+ N
Sbjct: 209 WQLTSLEELDLKDNQLTNLPAEIGQLTSLWQLHLSGNQLTSVPAEIGQLASLTELELNGN 268

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP EIG++T+L++L L GN L +L         PA +  L S    +      T+ 
Sbjct: 269 QLTSLPAEIGQLTSLKELELNGNQLTSL---------PAEIGQLTSLRLLSLRDNLLTSV 319

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I   T L+    EL L G  L+++P+EI     +  L    N +  LP E+    SL
Sbjct: 320 PAEIGQLTSLT----ELELHGNQLTSVPAEIGLLTSLRGLGFKDNQLTSLPAEIGQLTSL 375

Query: 406 Q 406
           +
Sbjct: 376 R 376



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 110/326 (33%), Positives = 172/326 (52%), Gaps = 19/326 (5%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +PA +G L  L+ L++  N +  +P EIG  T+L +     NQL+ +P+ +G+  +L++ 
Sbjct: 20  VPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQLTSLTEL 79

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW--TMLTELIASKNLLNGMP 200
              +N +TS+P ++   + + +LD+E N LT +   L   W  T L  LI   N L  +P
Sbjct: 80  NLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAEL---WQLTSLERLILDNNQLTSLP 136

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             IG L+ L  L LH  ++ S+P+ I    SL E ++  N L++LPAE+G+L+ L  L L
Sbjct: 137 AEIGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYGNQLTSLPAEIGQLTSLEKLYL 196

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           + NQL     E  QL  L  LDL +N L+ LP EIG++T+L +L L+GN L ++      
Sbjct: 197 YGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIGQLTSLWQLHLSGNQLTSV------ 250

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
              PA +  L S      +    T+    I   T L    KEL L G  L+++P+EI + 
Sbjct: 251 ---PAEIGQLASLTELELNGNQLTSLPAEIGQLTSL----KELELNGNQLTSLPAEIGQL 303

Query: 380 GEITKLDLSRNSIQELPPELSSCASL 405
             +  L L  N +  +P E+    SL
Sbjct: 304 TSLRLLSLRDNLLTSVPAEIGQLTSL 329



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 169/323 (52%), Gaps = 23/323 (7%)

Query: 14  LNLSNRSLRDVPNEV------------YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           LNL +  L  VP E+            Y +        + W+   L++LIL +N +  L 
Sbjct: 79  LNLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVP--AELWQLTSLERLILDNNQLTSLP 136

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++  L  L  L + H +L+ LPA IG+L  L+ + +  N +  +P EIG  T+L K   
Sbjct: 137 AEIGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYGNQLTSLPAEIGQLTSLEKLYL 196

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
             NQL  +P+ L +  +L +    +N +T+LP ++   + + +L + GN+LT +    I 
Sbjct: 197 YGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIGQLTSLWQLHLSGNQLTSVPAE-IG 255

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               LTEL  + N L  +P  IG L+ L  L+L+ N++ S+P+ I    SL    + +N 
Sbjct: 256 QLASLTELELNGNQLTSLPAEIGQLTSLKELELNGNQLTSLPAEIGQLTSLRLLSLRDNL 315

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L+++PAE+G+L+ L  L+LH NQL     E   L  L  L   +N L+ LP EIG++T+L
Sbjct: 316 LTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLLTSLRGLGFKDNQLTSLPAEIGQLTSL 375

Query: 301 RKL-----LLTGNP--LRTLRSS 316
           R L     LLT  P  +R LR++
Sbjct: 376 RGLGLECNLLTSVPAAIRELRAA 398



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 124/226 (54%), Gaps = 17/226 (7%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            L+  +P  +G LS L +L+L  N++ S+P+ I    SL E  +G N L ++PAE+G+L+
Sbjct: 15  GLIGAVPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQLT 74

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L+L  NQL     E  QL  L  LDL  N L+ +P E+ ++T+L +L+L  N L +
Sbjct: 75  SLTELNLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTS 134

Query: 313 LRSSLVNGPTPAL----LKYLR-SRLPENEDSEASTTKE------DLITMATRLS-VTSK 360
           L + +  G   +L    L +++ + LP  E  + ++ +E       L ++   +  +TS 
Sbjct: 135 LPAEI--GQLTSLKELGLHHIQLTSLPA-EIGQLTSLREVHLYGNQLTSLPAEIGQLTSL 191

Query: 361 E-LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           E L L G  L+++P+E+W+   + +LDL  N +  LP E+    SL
Sbjct: 192 EKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIGQLTSL 237


>gi|359683929|ref|ZP_09253930.1| hypothetical protein Lsan2_04281 [Leptospira santarosai str.
           2000030832]
          Length = 504

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 118/379 (31%), Positives = 182/379 (48%), Gaps = 49/379 (12%)

Query: 34  EAGEGDKWW-------EAVDLQKLILA----HNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           EA E DK++          D++ L L      N +  L +++ NL  L  LN++ N+ + 
Sbjct: 83  EADEKDKYYNLTEALQHPTDVRVLDLGPPEGGNKLTTLPKEIGNLQNLQELNLNSNQFTT 142

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG L  L++LD+S N +  +P EIG+   L   D + NQLK LP  + +   L   
Sbjct: 143 LPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEAL 202

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              NN +T+LP+++    K+  L +  N+LT L    I +   L EL  + N    +PE 
Sbjct: 203 HLGNNELTTLPKEIEKLQKLEALHLGNNELTTLPKE-IGNLQNLQELNLNSNQFTTLPEE 261

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG+L +L +L L  +R+ ++P  I    +L E  + +N  + LP E+G L KL  LDL+ 
Sbjct: 262 IGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNY 321

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           +QL     E  +L +L  L L+ N L  LP EIGK+  L+ L L+ N L TL   + N  
Sbjct: 322 SQLTTLPKEIGKLQKLQKLSLAQNQLKTLPKEIGKLQNLKNLSLSHNELTTLPKEIGN-- 379

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
               L+ L                              KEL L G  L+ +P +I    +
Sbjct: 380 ----LQNL------------------------------KELDLGGNQLTTLPEKIGNLQK 405

Query: 382 ITKLDLSRNSIQELPPELS 400
           + +L L+ N ++ LP E+ 
Sbjct: 406 LQELFLAGNRLKTLPKEIG 424



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 179/371 (48%), Gaps = 33/371 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N    L E++ NL  L  L++SHN+L+ LP  IG L  L++LD++ N +  
Sbjct: 129 NLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKT 188

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EI     L      +N+L  LP  + +   L      NN +T+LP+++ +   + +L
Sbjct: 189 LPKEIEKLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQEL 248

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+ T L    I +   L +L  + + L  +P+ IG+L  L  L+L+ N+  ++P  
Sbjct: 249 NLNSNQFTTLPEE-IGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEE 307

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I     L +  +  + L+ LP E+GKL KL  L L  NQLK    E  +L+ L  L LS+
Sbjct: 308 IGNLQKLQKLDLNYSQLTTLPKEIGKLQKLQKLSLAQNQLKTLPKEIGKLQNLKNLSLSH 367

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EIG +  L++L L GN L TL   + N      L+ L               
Sbjct: 368 NELTTLPKEIGNLQNLKELDLGGNQLTTLPEKIGN------LQKL--------------- 406

Query: 345 KEDLITMATRLSVTSKELS---------LEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
            ++L     RL    KE+          L    L+ +P EI     +  L+LS NS+   
Sbjct: 407 -QELFLAGNRLKTLPKEIGNLQNLQTLNLNNNQLTTLPKEIGNLQSLESLNLSGNSLTSF 465

Query: 396 PPELSSCASLQ 406
           P E+     L+
Sbjct: 466 PEEIGKLQKLK 476



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 160/328 (48%), Gaps = 40/328 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L+   L+ +P E+ K                L+ L L +N +  L +++  L  L  
Sbjct: 178 TLDLAQNQLKTLPKEIEK-------------LQKLEALHLGNNELTTLPKEIEKLQKLEA 224

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ +N+L+ LP  IG L  L+ L+++ N    +P+EIG+   L K   + ++L  LP  
Sbjct: 225 LHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKE 284

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL +   ++N  T+LPE++ +  K+ KLD+  ++LT L    I     L +L  +
Sbjct: 285 IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSQLTTLPKE-IGKLQKLQKLSLA 343

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +N L  +P+ IG L  L  L L  N + ++P  I    +L E  +G N L+ LP ++G L
Sbjct: 344 QNQLKTLPKEIGKLQNLKNLSLSHNELTTLPKEIGNLQNLKELDLGGNQLTTLPEKIGNL 403

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR------------------------LSVLDLSNNSLS 288
            KL  L L  N+LK    E   L+                        L  L+LS NSL+
Sbjct: 404 QKLQELFLAGNRLKTLPKEIGNLQNLQTLNLNNNQLTTLPKEIGNLQSLESLNLSGNSLT 463

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
             P EIGK+  L+ L L GNP   LRS 
Sbjct: 464 SFPEEIGKLQKLKWLYLGGNPF--LRSQ 489


>gi|307150709|ref|YP_003886093.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
 gi|306980937|gb|ADN12818.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
          Length = 876

 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/325 (34%), Positives = 171/325 (52%), Gaps = 41/325 (12%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           ++LD+SF  +  +P EIG  TAL   D  +N+L  LPS +G+ +NL+    ++N +T+LP
Sbjct: 19  ETLDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEIGKLINLTSLNLTDNQLTALP 78

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
            ++   S +S+L +  NKLT L    I   T+L EL  S N L  +P TI +L  + RL 
Sbjct: 79  PEIGKLSNLSRLHLSYNKLTSLPPE-IGQLTILCELYLSHNHLETLPFTIENLVHISRLS 137

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L  N++ ++PS+I G   L+   + NN L+ LP E+G+L+ L  LD+  NQL     E  
Sbjct: 138 LSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLNSLNQLDVGYNQLTTLPPEIG 197

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           QL  L  +D+S N L+ LPPEIG++  L  L ++ N L  L         P  + YL   
Sbjct: 198 QLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTIL---------PPEIGYL--- 245

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
                         +LI+           L+L    LS++P EI +  ++ +L LS N +
Sbjct: 246 -------------SNLIS-----------LNLSYNKLSSLPPEIGQLTKLIQLRLSHNQL 281

Query: 393 QELPPE---LSSCASLQVKFSDLVT 414
           QELP E   L+   SL +K + L+T
Sbjct: 282 QELPAEIGHLTQLTSLVLKNNQLLT 306



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 158/307 (51%), Gaps = 15/307 (4%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS + L  +P E+ K                L+ L L +N +  L  ++  L  LT 
Sbjct: 20  TLDLSFKKLETLPPEIGK-------------LTALRYLDLRNNKLTTLPSEIGKLINLTS 66

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN++ N+L+ LP  IG+L  L  L +S+N +  +P EIG  T L +   S N L+ LP +
Sbjct: 67  LNLTDNQLTALPPEIGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLPFT 126

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +   +++S    S N +T+LP  +    ++S LD+  N+LT L    I     L +L   
Sbjct: 127 IENLVHISRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPE-IGQLNSLNQLDVG 185

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L  LI +D+  N++ S+P  I    +L    + NN L+ LP E+G L
Sbjct: 186 YNQLTTLPPEIGQLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTILPPEIGYL 245

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           S L +L+L  N+L     E  QL +L  L LS+N L  LP EIG +T L  L+L  N L 
Sbjct: 246 SNLISLNLSYNKLSSLPPEIGQLTKLIQLRLSHNQLQELPAEIGHLTQLTSLVLKNNQLL 305

Query: 312 TLRSSLV 318
           TL   L+
Sbjct: 306 TLPFELI 312



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 132/250 (52%), Gaps = 29/250 (11%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           +L L+HN++E L   + NL  ++ L++S+N+L+ LP+AI  L  L  LD++ N +  +P 
Sbjct: 112 ELYLSHNHLETLPFTIENLVHISRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPP 171

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           EIG   +L + D   NQL  LP  +G+ LNL     S N +TSLP ++     +  L + 
Sbjct: 172 EIGQLNSLNQLDVGYNQLTTLPPEIGQLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTIS 231

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+LT+L                        P  IG LS LI L+L  N++ S+P  I  
Sbjct: 232 NNQLTIL------------------------PPEIGYLSNLISLNLSYNKLSSLPPEIGQ 267

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSN 284
              L +  + +N L  LPAE+G L++L +L L +NQL     E  QL    +L+ LDL  
Sbjct: 268 LTKLIQLRLSHNQLQELPAEIGHLTQLTSLVLKNNQLLTLPFELIQLVQFFKLTQLDLQE 327

Query: 285 NSLSGLPPEI 294
           N LS +PPEI
Sbjct: 328 NLLS-IPPEI 336



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 36/142 (25%)

Query: 264 QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           +L++   +A + +   LDLS   L  LPPEIGK+T LR L L  N L TL S +      
Sbjct: 5   ELQQVIQQAIEEKAETLDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEI------ 58

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
                                          +++TS  L+L    L+A+P EI +   ++
Sbjct: 59  ----------------------------GKLINLTS--LNLTDNQLTALPPEIGKLSNLS 88

Query: 384 KLDLSRNSIQELPPELSSCASL 405
           +L LS N +  LPPE+     L
Sbjct: 89  RLHLSYNKLTSLPPEIGQLTIL 110


>gi|418686505|ref|ZP_13247671.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738938|gb|EKQ83670.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 469

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 196/399 (49%), Gaps = 29/399 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS + L+ +P E+              +  +LQ L L +N +  L +++  L  L VL
Sbjct: 51  LDLSEQKLKTLPKEI-------------GQLQNLQVLELNNNQLATLPKEIGQLKNLQVL 97

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +++N+L+ LP  IG+L  L+ L+++ N +  +P EIG    L   + ++NQL  LP  +
Sbjct: 98  ELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEI 157

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL       N +T+LPE++        L +  N+LT L    I     L EL  + 
Sbjct: 158 GQLKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKE-IGQLKNLRELYLNT 216

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N     P+ IG L  L +L+L+ N++ ++P+ I    +L E ++  N L  L AE+G+L 
Sbjct: 217 NQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQ 276

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  LDL+ NQLK    E  QL+ L VLDL+NN    +P EIG++  L+ L L  N  +T
Sbjct: 277 NLQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKT 336

Query: 313 LRSSLVNGPTPAL---------LKYLRSRLPENEDSEA-STTKEDLITMATRLSVTS--K 360
           +   +  G    L         LK L + + + ++ +  S     L T+   +      +
Sbjct: 337 VSEEI--GQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEIRQLKNLR 394

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           EL L    L  + +EI +   + KL L  N +  LP E+
Sbjct: 395 ELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 433



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 192/385 (49%), Gaps = 36/385 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L +++  L  L VL +++N+L+ LP  IG+L  L+ L+++ N + 
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLA 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L   + ++NQL  LP  +G+  NL   + +NN + +LP+++     +  
Sbjct: 106 TLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQW 165

Query: 165 LDVEGNKLT---------------VLSNNL-------IASWTMLTELIASKNLLNGMPET 202
           L++  N+LT               VLS N        I     L EL  + N     P+ 
Sbjct: 166 LNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKE 225

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L +L+L+ N++ ++P+ I    +L E ++  N L  L AE+G+L  L  LDL+ 
Sbjct: 226 IGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLND 285

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQLK    E  QL+ L VLDL+NN    +P EIG++  L+ L L  N  +T+   +    
Sbjct: 286 NQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEI---- 341

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
               LK L+     N   +  + +   I     L +    LSL    L+ +P+EI +   
Sbjct: 342 --GQLKNLQMLFLNNNQLKTLSAE---IGQLKNLQM----LSLNANQLTTLPNEIRQLKN 392

Query: 382 ITKLDLSRNSIQELPPELSSCASLQ 406
           + +L LS N ++ L  E+    +L+
Sbjct: 393 LRELHLSYNQLKTLSAEIGQLKNLK 417



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 19/298 (6%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R L+LS+ K     + +LP+++     +  L++  N+L  L    I     L  L  + N
Sbjct: 49  RVLDLSEQK-----LKTLPKEIGQLQNLQVLELNNNQLATLPKE-IGQLKNLQVLELNNN 102

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+ IG L  L  L+L+ N++ ++P  I    +L    + NN L+ LP E+G+L  
Sbjct: 103 QLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKN 162

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L +NQL     E  QL+    L LS N L+ LP EIG++  LR+L L  N     
Sbjct: 163 LQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAF 222

Query: 314 RSSLVNGPTPALLKYLRSRLPE--NEDSEASTTKE------DLITMATRLSVTS--KELS 363
              +        L    ++L    NE  +    +E       L T++  +      + L 
Sbjct: 223 PKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLD 282

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCIS 421
           L    L  +P EI +   +  LDL+ N  + +P E+    +LQV   DL  N+   +S
Sbjct: 283 LNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQV--LDLGYNQFKTVS 338


>gi|449279622|gb|EMC87166.1| Leucine-rich repeat protein SHOC-2 [Columba livia]
          Length = 582

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 206/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+                L  L L  N I  +++D++NL  LT+L
Sbjct: 174 LDLRHNKLREIPSVVYR-------------LSSLATLYLRFNRITTVEKDIKNLSKLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P+EIGS   +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCMQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P+ LA CS++ +L++E N ++ L   L++S   LT L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISALPEGLLSSLVKLTSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  + +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPS++     L++    +N + SLP +                     
Sbjct: 103 MRLDLSKRSIHMLPSAIKELTQLTELYLYSNKLQSLPAE--------------------- 141

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
              +     L  L  S+N L  +P+++ +L +L  LDL  N++  IPS +    SLA  Y
Sbjct: 142 ---VGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLSSLATLY 198

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           +  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  LD+++N L  LP EIG
Sbjct: 199 LRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIG 258

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
               +  L L  N L  L  ++ N  + + L    +RL     S A  ++ D        
Sbjct: 259 SCMQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELD-------- 310

Query: 356 SVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELP 396
                EL+LE  N+SA+P  +  +  ++T L L+RN  Q  P
Sbjct: 311 -----ELNLENNNISALPEGLLSSLVKLTSLTLARNCFQSYP 347



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PS+I     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHMLPSAIKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    + A L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLSSLATL-YL 199

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   ++L++    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSKLTM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ SC  +Q+   DL  N+
Sbjct: 247 HNQLEHLPEEIGSC--MQITNLDLQHNE 272


>gi|312373148|gb|EFR20955.1| hypothetical protein AND_18230 [Anopheles darlingi]
          Length = 606

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 214/471 (45%), Gaps = 70/471 (14%)

Query: 5   LKAARTSGSLNLSNRSLRDVP-------------NEVYKNFDEAGEGDKWWEAVDLQKLI 51
           +K A  +G LNL+ + L  VP              EV  + D   E D WW    L  L 
Sbjct: 38  IKQALKTGVLNLAGKGLASVPEKVWNLSDSDENEKEVRYDLDRTQEEDSWWNQKSLTTLD 97

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N +  + E+++NL  LTVLN+  N L+ LP  IG L  L  L+V+ N + ++PD   
Sbjct: 98  LSSNTLTVISENIQNLADLTVLNLQDNALTSLPEGIGALTKLSKLNVARNKLAELPDSFF 157

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN-------------------NCITSL 152
               L   + S N+  E+  ++   + L   K +N                   N I  L
Sbjct: 158 GLKELKHLNLSHNEFPEVHPNISDLIMLETLKGTNLYFHSRLRSRGHEPQDISFNSINLL 217

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P  +    ++ +L +  N+LT L N+ I +   L +L  SKN L  +P  +G L +L   
Sbjct: 218 PGGIGFLVRLQQLTLNNNRLTELPND-IVNLRNLHKLDLSKNDLKRLPPVMGELRKLECF 276

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVE 271
            +  N I  +P   +GC +L E +M NN +  LPA+  + L +L  LDL  N+++    E
Sbjct: 277 YVQHNDIDELP-DFTGCEALKELHMANNFIRTLPADFCENLPQLRVLDLRDNKIERLPDE 335

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
              L  L+ LDLSNN++S LP  +  +  L  L + GNP+R++R  ++   T  +LK LR
Sbjct: 336 IALLASLTRLDLSNNTISSLPSCLSTLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLR 395

Query: 331 SRLPENEDS------------------EASTTKEDLITM--ATRLSVTSKELSLEGMNLS 370
            R    + +                  E + T  D+  M     L V+SK        L 
Sbjct: 396 ERDGPKQSNSRSTETSTTSSKGTGGFFEEAATFPDVYQMRKGRALIVSSKA-------LV 448

Query: 371 AIPSEIW---EAGEITKLDLSRNSIQELPPELSSCAS----LQVKFSDLVT 414
            +P +++       +  +D+S+N + E+P  L+  AS    L V F+ L T
Sbjct: 449 DMPEQVFCDAREAAVYNVDVSKNKLAEVPAGLALLASQLTELNVSFNLLRT 499



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 148/357 (41%), Gaps = 87/357 (24%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L L+N  L ++PN++                 +L KL L+ N++++L   +  L  L  
Sbjct: 229 QLTLNNNRLTELPNDIVN-------------LRNLHKLDLSKNDLKRLPPVMGELRKLEC 275

Query: 73  LNVSHNKLSELP-----AAIGELHM------------------LKSLDVSFNSIMKIPDE 109
             V HN + ELP      A+ ELHM                  L+ LD+  N I ++PDE
Sbjct: 276 FYVQHNDIDELPDFTGCEALKELHMANNFIRTLPADFCENLPQLRVLDLRDNKIERLPDE 335

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL---- 165
           I    +L + D S+N +  LPS L    +L   +   N I S+  D+  C     L    
Sbjct: 336 IALLASLTRLDLSNNTISSLPSCLSTLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLR 395

Query: 166 DVEGNKLTVLSNNLI---------------ASWTMLTE------LIASKNLLNGMPETIG 204
           + +G K +   +                  A++  + +      LI S   L  MPE + 
Sbjct: 396 ERDGPKQSNSRSTETSTTSSKGTGGFFEEAATFPDVYQMRKGRALIVSSKALVDMPEQVF 455

Query: 205 SLSR---LIRLDLHQNRILSIPSSISGCCS-LAEFYMGNNALSALPAELGKLSKLGTLDL 260
             +R   +  +D+ +N++  +P+ ++   S L E  +  N L  +P+   +  K+     
Sbjct: 456 CDAREAAVYNVDVSKNKLAEVPAGLALLASQLTELNVSFNLLRTVPSFFSQFDKI----- 510

Query: 261 HSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                            + L+LSNNSL  LP  +G + TLR+L +  N LR L SS+
Sbjct: 511 -----------------AYLNLSNNSLEELPEVVGLLVTLRELNVVNNQLRCLSSSV 550



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 137/320 (42%), Gaps = 45/320 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+++N  +R +P +  +N  +            L+ L L  N IE+L +++  L  LT L
Sbjct: 298 LHMANNFIRTLPADFCENLPQ------------LRVLDLRDNKIERLPDEIALLASLTRL 345

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI---GSATALVKF----------- 119
           ++S+N +S LP+ +  L  L SL V  N I  I  +I   G+   L              
Sbjct: 346 DLSNNTISSLPSCLSTLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLRERDGPKQSNS 405

Query: 120 ---------DCSSNQLKELPSSLGRCLNLSDFKA---SNNCITSLPEDL---ADCSKMSK 164
                       +    E  ++      +   +A   S+  +  +PE +   A  + +  
Sbjct: 406 RSTETSTTSSKGTGGFFEEAATFPDVYQMRKGRALIVSSKALVDMPEQVFCDAREAAVYN 465

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           +DV  NKL  +   L    + LTEL  S NLL  +P       ++  L+L  N +  +P 
Sbjct: 466 VDVSKNKLAEVPAGLALLASQLTELNVSFNLLRTVPSFFSQFDKIAYLNLSNNSLEELPE 525

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVL 280
            +    +L E  + NN L  L + + +L  L  L    N+++E       L    RL+ L
Sbjct: 526 VVGLLVTLRELNVVNNQLRCLSSSVYELKGLEILLASGNRIEEIDASETGLGALKRLATL 585

Query: 281 DLSNNSLSGLPPEIGKMTTL 300
           DL+NN++  +PP +G +  +
Sbjct: 586 DLANNNIKHVPPVLGTLKNI 605



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 20/171 (11%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R   +L +S+++L D+P +V+ +  EA   +     VD+ K         KL E    L 
Sbjct: 435 RKGRALIVSSKALVDMPEQVFCDAREAAVYN-----VDVSK--------NKLAEVPAGLA 481

Query: 69  LL----TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           LL    T LNVS N L  +P+   +   +  L++S NS+ ++P+ +G    L + +  +N
Sbjct: 482 LLASQLTELNVSFNLLRTVPSFFSQFDKIAYLNLSNNSLEELPEVVGLLVTLRELNVVNN 541

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPED---LADCSKMSKLDVEGNKL 172
           QL+ L SS+     L    AS N I  +      L    +++ LD+  N +
Sbjct: 542 QLRCLSSSVYELKGLEILLASGNRIEEIDASETGLGALKRLATLDLANNNI 592


>gi|417763987|ref|ZP_12411960.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353819|gb|EJP05972.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 452

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 183/340 (53%), Gaps = 19/340 (5%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++S N L+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + D   N+L  L
Sbjct: 73  LQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 132

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT-E 188
           P  +G+  NL +   ++N +T+LP+++     + +LD+  N+LT L   +     + T  
Sbjct: 133 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLN 192

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI ++  L  +P+ IG L  L  L+L  N++ ++P  I    +L    +  N ++ALP E
Sbjct: 193 LIVTQ--LTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKE 250

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L  L  LDLH NQL     E  QL+ L  LDL  N L+ LP EIG++  L++L L  
Sbjct: 251 IGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE 310

Query: 308 NPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
           N L TL         P  ++ L++ R+ + ++++ +T  ++++ + + L V    L+L  
Sbjct: 311 NQLTTL---------PKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQS-LQV----LALGS 356

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             LS +P EI +   +  L L  N +  LP E+    +LQ
Sbjct: 357 NRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQ 396



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 159/336 (47%), Gaps = 38/336 (11%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ + KL+ LP  IG+L  L+ LD+SFNS+  +P EIG    L + D S N L  LP  
Sbjct: 53  LDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL       N + +LP ++     + +LD+  NKLT L    I     L EL   
Sbjct: 113 VGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKE-IRQLRNLQELDLH 171

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +N L  +P+ IG L  L  L+L   ++ ++P  I    +L    + +N L+ LP E+G+L
Sbjct: 172 RNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGEL 231

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L L  N++     E  QL+ L  LDL  N L+ LP EIG++  L++L L  N L 
Sbjct: 232 QNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLT 291

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL         P  +  L++                            +EL L+   L+ 
Sbjct: 292 TL---------PKEIGQLQN---------------------------LQELCLDENQLTT 315

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +P EI +   +  LDL  N +  LP E+    SLQV
Sbjct: 316 LPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQV 351



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 137/269 (50%), Gaps = 25/269 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++R L  L  L++  N+L+ LP  IG+L  LK+L++    +  
Sbjct: 141 NLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTT 200

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +   NQL  LP  +G   NL       N IT+LP+++     +  L
Sbjct: 201 LPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWL 260

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT+L                        P+ IG L  L RLDLHQN++ ++P  
Sbjct: 261 DLHQNQLTIL------------------------PKEIGQLQNLQRLDLHQNQLTTLPKE 296

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E  +  N L+ LP E+ +L  L  LDL +NQL     E  +L+ L VL L +
Sbjct: 297 IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGS 356

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N LS LP EIG++  L+ L L  N L TL
Sbjct: 357 NRLSTLPKEIGQLQNLQVLALISNQLTTL 385



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 177/362 (48%), Gaps = 15/362 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N++  L +++  L  L  L++S N L+ LP  +G+L  L+ LD+  N +  
Sbjct: 72  NLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLAT 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L + D +SN+L  LP  + +  NL +     N +T+LP+++     +  L
Sbjct: 132 LPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++   +LT L    I     L  L    N L  +P+ IG L  L  L L +NRI ++P  
Sbjct: 192 NLIVTQLTTLPKE-IGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKE 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +  N L+ LP E+G+L  L  LDLH NQL     E  QL+ L  L L  
Sbjct: 251 IGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EI ++  LR L L  N L TL   ++   +  +L    +RL       ++  
Sbjct: 311 NQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRL-------STLP 363

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
           KE  I     L V    L+L    L+ +P EI +   + +L L  N +   P E+    +
Sbjct: 364 KE--IGQLQNLQV----LALISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKN 417

Query: 405 LQ 406
           LQ
Sbjct: 418 LQ 419



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 136/266 (51%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L  LN+   +L+ LP  IGEL  LK+L++  N +  
Sbjct: 164 NLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTT 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N++  LP  +G+  NL       N +T LP+++     + +L
Sbjct: 224 LPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L    I     L EL   +N L  +P+ I  L  L  LDL  N++ ++P  
Sbjct: 284 DLHQNQLTTLPKE-IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKE 342

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +    SL    +G+N LS LP E+G+L  L  L L SNQL     E  QL+ L  L L  
Sbjct: 343 VLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDE 402

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+  P EI ++  L++L L  NPL
Sbjct: 403 NQLTTFPKEIRQLKNLQELHLYLNPL 428



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 114/223 (51%), Gaps = 1/223 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L+ L L  N +  L +++  L  L +L +  N+++ LP  IG+L  L+ LD+  N 
Sbjct: 207 ELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQ 266

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG    L + D   NQL  LP  +G+  NL +     N +T+LP+++     +
Sbjct: 267 LTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD++ N+LT L   ++   + L  L    N L+ +P+ IG L  L  L L  N++ ++
Sbjct: 327 RVLDLDNNQLTTLPKEVLRLQS-LQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTL 385

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           P  I    +L E  +  N L+  P E+ +L  L  L L+ N L
Sbjct: 386 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 428



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L VL++ +N+L+ LP  +  L  L+ L +  N +  
Sbjct: 302 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 361

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP  +G+  NL +     N +T+ P+++     + +L
Sbjct: 362 LPKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQEL 421

Query: 166 DVEGNKLT 173
            +  N L+
Sbjct: 422 HLYLNPLS 429



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L VL +  N+LS LP  IG+L  L+ L +  N +  
Sbjct: 325 NLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTT 384

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 385 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430


>gi|455791564|gb|EMF43371.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 452

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 185/359 (51%), Gaps = 38/359 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++ + KL+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + D   N+L  LP 
Sbjct: 52  TLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPM 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN-----------NLI 180
            +G+  NL +   ++N +T+LP+++     + +LD+  N+LT L             NLI
Sbjct: 112 EIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLI 171

Query: 181 ASW--TMLTELIASKNL---------LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
            +   T+  E+   +NL         L  +P+ IG L  L  L L +NRI ++P  I   
Sbjct: 172 VTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQL 231

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            +L    +  N L+ LP E+G+L  L  LDLH NQL     E  QL+ L  LDL  N L+
Sbjct: 232 QNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLT 291

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKED 347
            LP EIG++  L++L L  N L TL         P  ++ L++ R+ + ++++ +T  ++
Sbjct: 292 TLPKEIGQLQNLQELCLDENQLTTL---------PKEIEQLQNLRVLDLDNNQLTTLPKE 342

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           ++ + + L V    L+L    LS +P EI +   +  L L  N +  LP E+    +LQ
Sbjct: 343 VLRLQS-LQV----LALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQ 396



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 143/269 (53%), Gaps = 2/269 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++R L  L  L++  N+L+ LP  IG+L  LK+L++    +  
Sbjct: 118 NLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTT 177

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +   NQL  LP  +G   NL       N IT+LP+++     +  L
Sbjct: 178 LPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWL 237

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L    I     L  L   +N L  +P+ IG L  L RLDLHQN++ ++P  
Sbjct: 238 DLHQNQLTTLPKE-IGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKE 296

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E  +  N L+ LP E+ +L  L  LDL +NQL     E  +L+ L VL L +
Sbjct: 297 IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGS 356

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N LS LP EIG++  L+ L L  N L TL
Sbjct: 357 NRLSTLPKEIGQLQNLQVLGLISNQLTTL 385



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 179/362 (49%), Gaps = 15/362 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N++  L +++  L  L  L++  N+L+ LP  IG+L  L+ LD++ N +  
Sbjct: 72  NLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTT 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EI     L + D   NQL  LP  +G+  NL         +T+LP+++ +   +  L
Sbjct: 132 LPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT L    I     L  L+  +N +  +P+ IG L  L  LDLHQN++ ++P  
Sbjct: 192 NLLDNQLTTLPKE-IGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKE 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +  N L+ LP E+G+L  L  LDLH NQL     E  QL+ L  L L  
Sbjct: 251 IGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDE 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EI ++  LR L L  N L TL   ++   +  +L    +RL       ++  
Sbjct: 311 NQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRL-------STLP 363

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
           KE  I     L V    L L    L+ +P EI +   + +L L  N +   P E+    +
Sbjct: 364 KE--IGQLQNLQV----LGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKN 417

Query: 405 LQ 406
           LQ
Sbjct: 418 LQ 419



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 131/269 (48%), Gaps = 25/269 (9%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L+ L L  N +  L +++  L  L +L +  N+++ LP  IG+L  L+ LD+  N 
Sbjct: 184 ELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQ 243

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG    L + D   NQL  LP  +G+  NL       N +T+LP+++     +
Sbjct: 244 LTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNL 303

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            +L ++ N+LT L                        P+ I  L  L  LDL  N++ ++
Sbjct: 304 QELCLDENQLTTL------------------------PKEIEQLQNLRVLDLDNNQLTTL 339

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P  +    SL    +G+N LS LP E+G+L  L  L L SNQL     E  QL+ L  L 
Sbjct: 340 PKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELC 399

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  N L+  P EI ++  L++L L  NPL
Sbjct: 400 LDENQLTTFPKEIRQLKNLQELHLYLNPL 428



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 124/251 (49%), Gaps = 14/251 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL +  L  +P E+              E  +L+ L+L  N I  L +++  L  L  
Sbjct: 190 TLNLLDNQLTTLPKEI-------------GELQNLEILVLRENRITALPKEIGQLQNLQW 236

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+ LP  IG+L  L+ LD+  N +  +P EIG    L + D   NQL  LP  
Sbjct: 237 LDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKE 296

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +     N +T+LP+++     +  LD++ N+LT L   ++   + L  L   
Sbjct: 297 IGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQS-LQVLALG 355

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L+ +P+ IG L  L  L L  N++ ++P  I    +L E  +  N L+  P E+ +L
Sbjct: 356 SNRLSTLPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQL 415

Query: 253 SKLGTLDLHSN 263
             L  L L+ N
Sbjct: 416 KNLQELHLYLN 426



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L VL++ +N+L+ LP  +  L  L+ L +  N +  
Sbjct: 302 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 361

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP  +G+  NL +     N +T+ P+++     + +L
Sbjct: 362 LPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQEL 421

Query: 166 DVEGNKLT 173
            +  N L+
Sbjct: 422 HLYLNPLS 429



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 53/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L VL +  N+LS LP  IG+L  L+ L +  N +  
Sbjct: 325 NLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTT 384

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 385 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430


>gi|186681684|ref|YP_001864880.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
 gi|186464136|gb|ACC79937.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
          Length = 1185

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 188/362 (51%), Gaps = 38/362 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L L+ N I ++ E +  L  LT+L +S N+++E+P AI +L  L  LD+S N I +
Sbjct: 173 NLTRLNLSSNQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITE 232

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ I  +T L   D SSNQ+ ++P ++ +  NL     S+N IT +PE LA+ + + +L
Sbjct: 233 IPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQL 292

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N++T +   L A+ T LT+L  S N +  +PE + +L  L RL L+ N+I  IP +
Sbjct: 293 HLSSNQITEIPEAL-ANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQITEIPEA 351

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           ++   +L +  + +N ++ +P  L  L+ L  L L SNQ+ E      +L  L+ LDL  
Sbjct: 352 LANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDLRF 411

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N ++ +P  I  +T L +L L+ N +  +  +L N                         
Sbjct: 412 NQITQIPKVIANLTNLTELHLSSNQITQIPEALAN------------------------- 446

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               +T  T+L  +S +       ++ IP  I +   +T+LDLS N I E+P  + S + 
Sbjct: 447 ----LTNLTQLYFSSNQ-------ITQIPGAIAKLTNLTQLDLSGNQITEIPEAIESLSK 495

Query: 405 LQ 406
           L+
Sbjct: 496 LE 497



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 199/383 (51%), Gaps = 19/383 (4%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + + L++LIL    + ++ + + NL  LT L +S+N+++++P AI +L  L  L  S N 
Sbjct: 101 QILHLEELILIRVELTEIPDAIANLTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNK 160

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           I +IP+ I + T L + + SSNQ+ ++P  + +  NL+    S N IT +PE +A  + +
Sbjct: 161 ITQIPEAIANLTNLTRLNLSSNQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNL 220

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           + LD+  NK+T +   +  S T LT L  S N +  +PE I  L+ L  L L  N+I  I
Sbjct: 221 TLLDLSDNKITEIPEAITQS-TNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEI 279

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P +++   +L + ++ +N ++ +P  L  L+ L  L L  NQ+ E       L  L+ L 
Sbjct: 280 PEALANLTNLMQLHLSSNQITEIPEALANLTNLTQLYLSGNQITEIPEALANLPNLTRLY 339

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           L +N ++ +P  +  +T L +L+L  N +  +  +L N     L   ++  L  N+ +E 
Sbjct: 340 LYSNQITEIPEALANLTNLIQLVLFSNQIAEIPETLAN-----LTNLIQLVLFSNQIAEI 394

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             T   L T  TRL +   +       ++ IP  I     +T+L LS N I ++P  L++
Sbjct: 395 PETLAKL-TNLTRLDLRFNQ-------ITQIPKVIANLTNLTELHLSSNQITQIPEALAN 446

Query: 402 CASL-QVKFSDLVTNKESCISGC 423
             +L Q+ FS   +N+ + I G 
Sbjct: 447 LTNLTQLYFS---SNQITQIPGA 466



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 162/305 (53%), Gaps = 15/305 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  +  +P  + K               +L  L L+ N I ++ E +  L  LT+L
Sbjct: 177 LNLSSNQITQIPEVIAK-------------LTNLTLLYLSGNQITEIPEAIAQLTNLTLL 223

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S NK++E+P AI +   L  LD+S N I KIP+ I   T L     S NQ+ E+P +L
Sbjct: 224 DLSDNKITEIPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEAL 283

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL     S+N IT +PE LA+ + +++L + GN++T +   L A+   LT L    
Sbjct: 284 ANLTNLMQLHLSSNQITEIPEALANLTNLTQLYLSGNQITEIPEAL-ANLPNLTRLYLYS 342

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +PE + +L+ LI+L L  N+I  IP +++   +L +  + +N ++ +P  L KL+
Sbjct: 343 NQITEIPEALANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAKLT 402

Query: 254 KLGTLDLHSNQLKEYC-VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  LDL  NQ+ +   V A    L+ L LS+N ++ +P  +  +T L +L  + N +  
Sbjct: 403 NLTRLDLRFNQITQIPKVIANLTNLTELHLSSNQITQIPEALANLTNLTQLYFSSNQITQ 462

Query: 313 LRSSL 317
           +  ++
Sbjct: 463 IPGAI 467



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 194/379 (51%), Gaps = 19/379 (5%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           GD + E V       + NN++ L  +L  LP L  L++S N L  +P  + ++  L+ L 
Sbjct: 57  GDHFLEKV-------SGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELI 109

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           +    + +IPD I + T L +   S NQ+ ++P ++ +  NL+    S+N IT +PE +A
Sbjct: 110 LIRVELTEIPDAIANLTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIA 169

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           + + +++L++  N++T +   +IA  T LT L  S N +  +PE I  L+ L  LDL  N
Sbjct: 170 NLTNLTRLNLSSNQITQIP-EVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDN 228

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 276
           +I  IP +I+   +L    + +N ++ +P  + +L+ L  L L  NQ+ E       L  
Sbjct: 229 KITEIPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEALANLTN 288

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  L LS+N ++ +P  +  +T L +L L+GN +  +  +L N P    L    +++ E 
Sbjct: 289 LMQLHLSSNQITEIPEALANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQITEI 348

Query: 337 EDSEASTTK-EDLITMATRLSVTSK---------ELSLEGMNLSAIPSEIWEAGEITKLD 386
            ++ A+ T    L+  + +++   +         +L L    ++ IP  + +   +T+LD
Sbjct: 349 PEALANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAKLTNLTRLD 408

Query: 387 LSRNSIQELPPELSSCASL 405
           L  N I ++P  +++  +L
Sbjct: 409 LRFNQITQIPKVIANLTNL 427



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 132/306 (43%), Gaps = 54/306 (17%)

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDF------------------KASNNCITSLPEDLADC 159
           + D S  +L ELP  +G+   L                     K S N + +LP +L   
Sbjct: 20  ELDLSGQELTELPVEIGKLQQLESLILGKKVEGYERVGDHFLEKVSGNNLKTLPLELLGL 79

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
             + KLD+ GN L  + + ++     L ELI  +  L  +P+ I +L+ L +L L  N+I
Sbjct: 80  PNLRKLDISGNPLESIPD-VVTQILHLEELILIRVELTEIPDAIANLTNLTQLILSYNQI 138

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV 279
             IP +I+   +L      +N ++ +P  +  L+ L  L+L SNQ               
Sbjct: 139 TQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQ--------------- 183

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
                  ++ +P  I K+T L  L L+GN +  +  ++       LL      L +N+ +
Sbjct: 184 -------ITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLD-----LSDNKIT 231

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           E      + IT +T L+V    L L    ++ IP  I +   +  L LS N I E+P  L
Sbjct: 232 EIP----EAITQSTNLTV----LDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEAL 283

Query: 400 SSCASL 405
           ++  +L
Sbjct: 284 ANLTNL 289


>gi|421094636|ref|ZP_15555352.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362698|gb|EKP13735.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891450|gb|EMG02161.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 331

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 107/289 (37%), Positives = 149/289 (51%), Gaps = 10/289 (3%)

Query: 29  YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
           Y N  EA        A D++ L L HN ++ L +D+  L  L VL++  N+L+ LP  I 
Sbjct: 32  YDNLTEA-----LQNATDVRILSL-HNKLKTLPKDIGKLKKLRVLDLRGNQLTTLPKEIE 85

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           +L  L  L+++ N    IP+EIG    L +     NQLK LP  +G+  NL     SNN 
Sbjct: 86  QLQNLTELNLNKNQFTTIPNEIGYLKNLQELHIGGNQLKTLPKDIGKLKNLQVLHLSNNK 145

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           + +LP ++     + KL +  N+LT+L    I     LT+L  + N L  +P  IG L  
Sbjct: 146 LATLPNEIRKLQNLQKLYLSENQLTILPEE-IGKLKNLTKLDLNYNELTTLPNEIGKLQN 204

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L L  N++  +P  I     L   Y+  N    LP E+G+L KL  L L SNQLK +
Sbjct: 205 LQELTLGYNQLTVLPKEIRELQKLTVLYLSYNQFKTLPKEIGELQKLTVLYLRSNQLKMF 264

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
             E  +L+ L  LDLS+N L+ LP EIG++  LRKL L   P   LRS 
Sbjct: 265 PNEIGKLKELESLDLSHNQLTTLPKEIGELQNLRKLYLDDIP--ALRSQ 311



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 129/269 (47%), Gaps = 19/269 (7%)

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +N + +LP+D+    K+  LD+ GN+LT L    I     LTEL  +KN    +P  IG 
Sbjct: 51  HNKLKTLPKDIGKLKKLRVLDLRGNQLTTLPKE-IEQLQNLTELNLNKNQFTTIPNEIGY 109

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  L  L +  N++ ++P  I    +L   ++ NN L+ LP E+ KL  L  L L  NQL
Sbjct: 110 LKNLQELHIGGNQLKTLPKDIGKLKNLQVLHLSNNKLATLPNEIRKLQNLQKLYLSENQL 169

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL--VNGPT 322
                E  +L+ L+ LDL+ N L+ LP EIGK+  L++L L  N L  L   +  +   T
Sbjct: 170 TILPEEIGKLKNLTKLDLNYNELTTLPNEIGKLQNLQELTLGYNQLTVLPKEIRELQKLT 229

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
              L Y + +    E  E             +L+V    L L    L   P+EI +  E+
Sbjct: 230 VLYLSYNQFKTLPKEIGELQ-----------KLTV----LYLRSNQLKMFPNEIGKLKEL 274

Query: 383 TKLDLSRNSIQELPPELSSCASLQVKFSD 411
             LDLS N +  LP E+    +L+  + D
Sbjct: 275 ESLDLSHNQLTTLPKEIGELQNLRKLYLD 303



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 13/162 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN  L  +PNE+ K               +LQKL L+ N +  L E++  L  LT L
Sbjct: 139 LHLSNNKLATLPNEIRK-------------LQNLQKLYLSENQLTILPEEIGKLKNLTKL 185

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N+L+ LP  IG+L  L+ L + +N +  +P EI     L     S NQ K LP  +
Sbjct: 186 DLNYNELTTLPNEIGKLQNLQELTLGYNQLTVLPKEIRELQKLTVLYLSYNQFKTLPKEI 245

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           G    L+     +N +   P ++    ++  LD+  N+LT L
Sbjct: 246 GELQKLTVLYLRSNQLKMFPNEIGKLKELESLDLSHNQLTTL 287


>gi|418678790|ref|ZP_13240064.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321980|gb|EJO69840.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 379

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 147/269 (54%), Gaps = 2/269 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L +N +  L  ++  L  L VL++  N+L+ LP  IG+L  L+ L++ FN +  
Sbjct: 72  NLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PDE+G    L   +   N+L  LP  +G+  NL       N +T LPE +     +  L
Sbjct: 132 LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ NKLT+L    I     L  L +  N L   P+ IG LS+L +L L+ N++ ++P  
Sbjct: 192 NLDLNKLTILPEK-IGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEE 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I     L E Y+GNN L  LP E+ +L KL TL L  NQ+  +  E  QL+ L  L+L  
Sbjct: 251 IGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGF 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N L+ LP EIG++  L++L L  N L TL
Sbjct: 311 NQLTTLPQEIGQLQNLQELNLEFNQLATL 339



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 158/347 (45%), Gaps = 64/347 (18%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +LN+S +KL+ L   IG+L  L+ L +++N +  +P+EIG    L   D  SN+L  LP 
Sbjct: 52  ILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +T LP+++     +  L+++ NKLT+L                
Sbjct: 112 EIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   PE IG L  L  L+L  N++  +P  I    +L    +  N L+ LP ++G+
Sbjct: 156 --------PEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+   NQL  +  E  QL +L  L L  N L+ LP EIG++  L++L L  NPL
Sbjct: 208 LQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPL 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           RTL   +                            E L  + T        L LEG  ++
Sbjct: 268 RTLPKEI----------------------------EQLQKLQT--------LYLEGNQIT 291

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ---VKFSDLVT 414
             P EI +   + +L+L  N +  LP E+    +LQ   ++F+ L T
Sbjct: 292 TFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLAT 338



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 133/266 (50%), Gaps = 25/266 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L VLN+  NKL+ LP  IG+L  L+ L++  N +  
Sbjct: 118 NLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTI 177

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P++IG    L   +   N+L  LP  +G+  NL    +  N +T+ P+++   SK+ KL
Sbjct: 178 LPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKL 237

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            + GN+LT L                        PE IG L +L  L L  N + ++P  
Sbjct: 238 YLYGNQLTTL------------------------PEEIGQLKKLQELYLGNNPLRTLPKE 273

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I     L   Y+  N ++  P E+G+L  L  L+L  NQL     E  QL+ L  L+L  
Sbjct: 274 IEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEF 333

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP E+G++  LRKL L  NP+
Sbjct: 334 NQLATLPKEVGQLQKLRKLNLYNNPI 359



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 122/260 (46%), Gaps = 15/260 (5%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           +L E L +      L++ G+KL  LS   I     L +L  + N L  +P  IG L  L 
Sbjct: 39  NLTEALQNPKDARILNLSGSKLATLSKE-IGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQ 97

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            LDL+ N +  +P  I    +L    +G N L+ LP E+G+L  L  L+L  N+L     
Sbjct: 98  VLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPE 157

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +  QL+ L VL+L  N L+ LP +IG++  L+ L L  N L  L         P  +  L
Sbjct: 158 KIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTIL---------PEKIGQL 208

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           ++    N      TT    I   ++L    ++L L G  L+ +P EI +  ++ +L L  
Sbjct: 209 QNLQILNSQGNQLTTFPKEIGQLSKL----QKLYLYGNQLTTLPEEIGQLKKLQELYLGN 264

Query: 390 NSIQELPPELSSCASLQVKF 409
           N ++ LP E+     LQ  +
Sbjct: 265 NPLRTLPKEIEQLQKLQTLY 284


>gi|71895087|ref|NP_001026407.1| leucine-rich repeat protein SHOC-2 [Gallus gallus]
 gi|82231244|sp|Q5F4C4.1|SHOC2_CHICK RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|60098359|emb|CAH65010.1| hypothetical protein RCJMB04_1b13 [Gallus gallus]
          Length = 529

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 192/391 (49%), Gaps = 56/391 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+                L  L L  N I  +++D++ L  LT+L
Sbjct: 174 LDLRHNKLREIPSVVYR-------------LTSLATLYLRFNRITTVEKDIKTLSKLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P+EIGS T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P+ LA CS++ +L++E N ++ L   L++S   LT L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           L+ +P  I     +T L L  N +  LP E+
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 116/282 (41%), Gaps = 73/282 (25%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L  L +AHN +E L E++ +   +T L++ HN+L +LP  IG L  L  L + +N 
Sbjct: 236 ELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNR 295

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSL----------------------------- 133
           +  IP  +   + L + +  +N +  LP  L                             
Sbjct: 296 LSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFS 355

Query: 134 --------------------GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
                                R   LS     +N +TSLP D    + M +L++  N+LT
Sbjct: 356 TIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLT 415

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS------ 227
            +  + ++    L  LI S NLL  +P  IG+L +L  LDL +N++ S+P+ I+      
Sbjct: 416 KIPED-VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQ 474

Query: 228 -----------------GCCSLAEFYMGNNALSALPAELGKL 252
                               +L    +G N L+ LP E+GK+
Sbjct: 475 KLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGKI 516



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 39/282 (13%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D +   +  LPS++     L++    +N + SLP +                     
Sbjct: 103 MRLDLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAE--------------------- 141

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
              +     L  L  S+N L  +P+++ +L +L  LDL  N++  IPS +    SLA  Y
Sbjct: 142 ---VGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATLY 198

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           +  N ++ +  ++  LSKL  L +  N++K+   E  +L  L  LD+++N L  LP EIG
Sbjct: 199 LRFNRITTVEKDIKTLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIG 258

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
             T +  L L  N L  L  ++ N  + + L    +RL     S A  ++ D        
Sbjct: 259 SCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELD-------- 310

Query: 356 SVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELP 396
                EL+LE  N+S +P  +  +  ++T L L+RN  Q  P
Sbjct: 311 -----ELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYP 347



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 37/207 (17%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PS++     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLAKRSIHMLPSAVKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    + A L YL
Sbjct: 144 ---CLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLTSLATL-YL 199

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           R        +  +T ++D+ T++ +L++    LS+    +  +P+EI E   +  LD++ 
Sbjct: 200 RF-------NRITTVEKDIKTLS-KLTM----LSIRENKIKQLPAEIGELCNLITLDVAH 247

Query: 390 NSIQELPPELSSCASLQVKFSDLVTNK 416
           N ++ LP E+ SC   Q+   DL  N+
Sbjct: 248 NQLEHLPEEIGSCT--QITNLDLQHNE 272



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 36/144 (25%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+   L  +P +V      +G        V L+ LIL++N ++K              
Sbjct: 407 LNLATNQLTKIPEDV------SG-------LVSLEVLILSNNLLKK-------------- 439

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
                    LP  IG L  L+ LD+  N +  +P+EI     L K   ++NQL  LP  +
Sbjct: 440 ---------LPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490

Query: 134 GRCLNLSDFKASNNCITSLPEDLA 157
           G   NL+      N +T LPE++ 
Sbjct: 491 GHLTNLTHLGLGENLLTHLPEEIG 514


>gi|113477255|ref|YP_723316.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
 gi|110168303|gb|ABG52843.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
          Length = 1041

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/274 (38%), Positives = 150/274 (54%), Gaps = 2/274 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L L  N +  L E +  L  LT L +S NKL+ LP +IG+L  L SLD+  N +  
Sbjct: 96  NLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLSNLTSLDLGGNQLTS 155

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+ I   + L +     NQL  LP S+ +  NL++    +N +TSLPE +   S ++ L
Sbjct: 156 LPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTSL 215

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  NKLT L  + I   + LT L    N L  +PE+I +LS L  LDL  N++ S+P S
Sbjct: 216 DLSWNKLTSLPES-ITKLSNLTSLYLGSNQLTSLPESITTLSNLTVLDLGSNQLTSMPES 274

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I+   +L E Y+  N L+ LP  + KLS L  LDL +NQL        +L  L+ L+LS 
Sbjct: 275 ITKLSNLTELYLDGNQLTRLPESITKLSNLTKLDLRNNQLTRLPESITKLSNLTKLNLSW 334

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           N L+ LP  IGK++ L  L L  N L  L  S+ 
Sbjct: 335 NKLTSLPESIGKLSNLTSLYLRDNQLTILPESIT 368



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 124/369 (33%), Positives = 184/369 (49%), Gaps = 41/369 (11%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L VL++  N+L+ LP +IG+L  L SL +  N +  +P+ I   + L +    
Sbjct: 44  DVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLVNNKLTSLPESITKLSNLTELYLD 103

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP S+ +  NL++   S N +TSLPE +   S ++ LD+ GN+LT L  + I  
Sbjct: 104 GNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLSNLTSLDLGGNQLTSLPES-ITK 162

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            + LTEL    N L  +PE+I  LS L  L L  N++ S+P SI+   +L    +  N L
Sbjct: 163 LSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTSLDLSWNKL 222

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           ++LP  + KLS L +L L SNQL         L  L+VLDL +N L+ +P  I K++ L 
Sbjct: 223 TSLPESITKLSNLTSLYLGSNQLTSLPESITTLSNLTVLDLGSNQLTSMPESITKLSNLT 282

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L L GN L                    +RLPE+                T+LS  +K 
Sbjct: 283 ELYLDGNQL--------------------TRLPES---------------ITKLSNLTK- 306

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP---ELSSCASLQVKFSDLVTNKES 418
           L L    L+ +P  I +   +TKL+LS N +  LP    +LS+  SL ++ + L    ES
Sbjct: 307 LDLRNNQLTRLPESITKLSNLTKLNLSWNKLTSLPESIGKLSNLTSLYLRDNQLTILPES 366

Query: 419 CISGCYLYW 427
             +   L W
Sbjct: 367 ITTLSNLGW 375



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 189/393 (48%), Gaps = 51/393 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LS   L +VP +V             WE   L+ L L  N +  L E +  L  LT L
Sbjct: 31  LYLSGCKLTEVPGDV-------------WELEQLEVLDLGSNELTSLPESIGKLSNLTSL 77

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + +NKL+ LP +I +L  L  L +  N +  +P+ I   + L +   S N+L  LP S+
Sbjct: 78  YLVNNKLTSLPESITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESI 137

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL+      N +TSLPE +   S +++L +  N+LT L  + I   + LTEL    
Sbjct: 138 GKLSNLTSLDLGGNQLTSLPESITKLSNLTELYLGHNQLTSLPES-ITKLSNLTELYLGH 196

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +PE+I  LS L  LDL  N++ S+P SI+   +L   Y+G+N L++LP  +  LS
Sbjct: 197 NQLTSLPESITKLSNLTSLDLSWNKLTSLPESITKLSNLTSLYLGSNQLTSLPESITTLS 256

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  LDL SNQL        +L  L+ L L  N L+ LP  I K++ L KL L  N L  
Sbjct: 257 NLTVLDLGSNQLTSMPESITKLSNLTELYLDGNQLTRLPESITKLSNLTKLDLRNNQL-- 314

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                             +RLPE+                T+LS  +K L+L    L+++
Sbjct: 315 ------------------TRLPES---------------ITKLSNLTK-LNLSWNKLTSL 340

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           P  I +   +T L L  N +  LP  +++ ++L
Sbjct: 341 PESIGKLSNLTSLYLRDNQLTILPESITTLSNL 373



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 128/228 (56%), Gaps = 1/228 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L L HN +  L E +  L  LT L + HN+L+ LP +I +L  L SLD+S+N +  
Sbjct: 165 NLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTSLDLSWNKLTS 224

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+ I   + L      SNQL  LP S+    NL+     +N +TS+PE +   S +++L
Sbjct: 225 LPESITKLSNLTSLYLGSNQLTSLPESITTLSNLTVLDLGSNQLTSMPESITKLSNLTEL 284

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++GN+LT L  + I   + LT+L    N L  +PE+I  LS L +L+L  N++ S+P S
Sbjct: 285 YLDGNQLTRLPES-ITKLSNLTKLDLRNNQLTRLPESITKLSNLTKLNLSWNKLTSLPES 343

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           I    +L   Y+ +N L+ LP  +  LS LG L L++N L+   +E  
Sbjct: 344 IGKLSNLTSLYLRDNQLTILPESITTLSNLGWLYLNNNPLENPPIEIA 391



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 111/229 (48%), Gaps = 20/229 (8%)

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           A +  L  L  S   L  +P  +  L +L  LDL  N + S+P SI    +L   Y+ NN
Sbjct: 23  AKYQKLKWLYLSGCKLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLVNN 82

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            L++LP  + KLS L  L L  NQL        +L  L+ L LS N L+ LP  IGK++ 
Sbjct: 83  KLTSLPESITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLSN 142

Query: 300 LRKLLLTGNPLRTLRSSL--VNGPTPALLKYLR-SRLPENEDSEASTTKEDLITMATRLS 356
           L  L L GN L +L  S+  ++  T   L + + + LPE+            IT  + L+
Sbjct: 143 LTSLDLGGNQLTSLPESITKLSNLTELYLGHNQLTSLPES------------ITKLSNLT 190

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
               EL L    L+++P  I +   +T LDLS N +  LP  ++  ++L
Sbjct: 191 ----ELYLGHNQLTSLPESITKLSNLTSLDLSWNKLTSLPESITKLSNL 235


>gi|359728044|ref|ZP_09266740.1| hypothetical protein Lwei2_14432 [Leptospira weilii str.
           2006001855]
          Length = 456

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 177/385 (45%), Gaps = 43/385 (11%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y N  EA +        D+Q L L  N +  L +++  L  L  L+  +N+L  +P  I
Sbjct: 86  IYHNLTEALQN-----PTDVQILYLNSNQLITLPKEIGKLKKLRELHSYNNQLKAIPKEI 140

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G+L  L+ LD++ N +  IP EIG    L +     NQLK +P   G+  +L     SNN
Sbjct: 141 GKLQNLQKLDLNHNQLKTIPKEIGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNN 200

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + +LP++  D   +  L +  N+L  L    I     L EL    N L  +P+ IG L 
Sbjct: 201 QLKTLPKEFGDLKSLQVLYLSNNQLKTLPKE-IRKLKKLQELALYNNQLKTLPKEIGKLQ 259

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L L  N++  +P       SL + Y+ N  L+  P E+G+L  L  L L +NQL  
Sbjct: 260 NLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNEIGELQNLTELYLSNNQLTT 319

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
           +  E  +L+ L+ L LSNN L  LP +I K+  L+ L+L  N L T+             
Sbjct: 320 FPNEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVLILNNNQLTTI------------- 366

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                    NE  E              L V    L+L    L+ IP+EI E   + +L+
Sbjct: 367 --------PNEIGELKN-----------LQV----LTLNNNQLTTIPNEIGELKNLRELN 403

Query: 387 LSRNSIQELPPELSSCASLQVKFSD 411
           LSRN +Q LP E+    +LQ  + D
Sbjct: 404 LSRNQLQALPKEIGHLKNLQELYLD 428



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 150/307 (48%), Gaps = 33/307 (10%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAG-EGDK-------WWEAVDLQKLILAHNNIEKLKE 62
            L+L++  L+ +P E+ K  N  E G  G++       + +   LQ L L++N ++ L +
Sbjct: 148 KLDLNHNQLKTIPKEIGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNNQLKTLPK 207

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           +  +L  L VL +S+N+L  LP  I +L  L+ L +  N +  +P EIG    L     S
Sbjct: 208 EFGDLKSLQVLYLSNNQLKTLPKEIRKLKKLQELALYNNQLKTLPKEIGKLQNLQVLGLS 267

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQLK+LP   G+  +L     SN  +T+ P ++ +   +++L +  N+LT   N  I  
Sbjct: 268 YNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNEIGELQNLTELYLSNNQLTTFPNE-IGE 326

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              LTEL  S N L  +P+ I  L  L  L L+ N++ +IP+ I    +L    + NN L
Sbjct: 327 LQNLTELYLSNNQLQALPKKIEKLKNLQVLILNNNQLTTIPNEIGELKNLQVLTLNNNQL 386

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           + +P E+G+L  L  L+L  NQL+                       LP EIG +  L++
Sbjct: 387 TTIPNEIGELKNLRELNLSRNQLQ----------------------ALPKEIGHLKNLQE 424

Query: 303 LLLTGNP 309
           L L   P
Sbjct: 425 LYLDDIP 431


>gi|421110777|ref|ZP_15571268.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803874|gb|EKS10001.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 390

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 160/310 (51%), Gaps = 46/310 (14%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++ NL  L  L++  NK++ LP  IG+L  L+ L++SFN +  
Sbjct: 61  NLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLAT 120

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L +     NQ   LP  +G+  NL + ++S N +T+LP+++ +   + +L
Sbjct: 121 LPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLTTLPKEIGNLQNLQEL 180

Query: 166 DVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPETI 203
            +  N+LT L                 N L      I +   L +L+ ++N L  +P  I
Sbjct: 181 YLNENQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQKLVLNRNQLTALPIEI 240

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G+L  L  L+L +N++ ++P  I    +L   ++GNN L+ALP E+G L KL  L L+ N
Sbjct: 241 GNLQNLQGLNLDKNQLTTLPKEIRKLQNLQGLHLGNNKLTALPIEIGNLQKLKWLGLNKN 300

Query: 264 Q-------------LKEYCVEACQL-----------RLSVLDLSNNSLSGLPPEIGKMTT 299
           Q             LKE  + + QL           +L  LDL NN L+ LP EIG +  
Sbjct: 301 QLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGNLQN 360

Query: 300 LRKLLLTGNP 309
           L++L L GNP
Sbjct: 361 LQRLYLGGNP 370



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 175/351 (49%), Gaps = 19/351 (5%)

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
           KL E L+N   + VL ++  KL+ LP  IG+L  L+ L++  N +  +P EIG+   L K
Sbjct: 28  KLNEALQNPTQVRVLYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQK 87

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D   N++  LP  +G+  +L +   S N + +LP+++ +   + +L +  N+ T L   
Sbjct: 88  LDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEE 147

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I     L E+ +SKN L  +P+ IG+L  L  L L++N++ ++P  I    +L +  + 
Sbjct: 148 -IGKLQNLQEMESSKNQLTTLPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLN 206

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
            N L+ALP E+G L  L  L L+ NQL    +E   L+ L  L+L  N L+ LP EI K+
Sbjct: 207 RNQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQGLNLDKNQLTTLPKEIRKL 266

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L L  N L  L   + N      LK+L               K  L T+   +  
Sbjct: 267 QNLQGLHLGNNKLTALPIEIGNLQK---LKWL------------GLNKNQLTTIPKEIGN 311

Query: 358 TS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
               KEL+L    L+ IP EI    ++  LDL  N +  LP E+ +  +LQ
Sbjct: 312 LQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGNLQNLQ 362


>gi|383865861|ref|XP_003708391.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Megachile
           rotundata]
          Length = 610

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 202/407 (49%), Gaps = 33/407 (8%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK+ R    L+L +  L ++P+ VYK                L  L L  N +  + +++
Sbjct: 197 LKSLRV---LDLRHNKLSEIPDVVYK-------------LTSLTTLFLRFNRVRYVSDNI 240

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           RNL  LT+L++  NK+ ELPA IG+L  L + DVS N +  +P+EIG+   L   D   N
Sbjct: 241 RNLTNLTMLSLRENKIKELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHN 300

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L ++P ++G  ++L+      N ++++P+ LA+C  M +  VEGN+++ L + L+AS +
Sbjct: 301 ELLDIPDTIGNLISLTRLGLRYNRLSNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLS 360

Query: 185 MLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNAL 242
            LT +  S+N     P       + +  ++L  N+I  IP  I S   +L +  M  N L
Sbjct: 361 DLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQL 420

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           +ALP ++G    +  L+L +NQL +   +  C   L +L LSNN L  +P  I  +  LR
Sbjct: 421 TALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQSLEILILSNNLLKRIPASIANLRKLR 480

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N + +L         P  + +LR        S   T+    I   T L+     
Sbjct: 481 VLDLEENKIESL---------PNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTY---- 527

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQV 407
           LS+   NL+ +P EI     +  L ++ N+ +  LP EL+ C +L +
Sbjct: 528 LSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSI 574



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 151/330 (45%), Gaps = 23/330 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S +SI  +P  +   T LV+F    N+L  LP  +G   NL     S N +TSLP  
Sbjct: 134 LDLSKSSITNLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLANLETLALSENSLTSLPNT 193

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L +   +  LD+  NKL+ +  +++   T LT L    N +  + + I +L+ L  L L 
Sbjct: 194 LENLKSLRVLDLRHNKLSEIP-DVVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLSLR 252

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I    +L  F + +N L  LP E+G   +L TLDL  N+L +       L
Sbjct: 253 ENKIKELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNL 312

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL-----------------RSSL 317
             L+ L L  N LS +P  +     + +  + GN +  L                 R++ 
Sbjct: 313 ISLTRLGLRYNRLSNIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRNAF 372

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
              P+    ++        E ++       + + A  L+    +L+++   L+A+P +I 
Sbjct: 373 TAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLT----KLNMKENQLTALPLDIG 428

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQV 407
               + +L+L  N + ++P ++    SL++
Sbjct: 429 TWVNMVELNLGTNQLTKIPDDIQCLQSLEI 458



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 146/344 (42%), Gaps = 75/344 (21%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L    ++HN++E L E++ N   L+ L++ HN+L ++P  IG L  L  L + +N + 
Sbjct: 267 VNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLISLTRLGLRYNRLS 326

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSL------------------------------- 133
            IP  + +   + +F    NQ+ +LP  L                               
Sbjct: 327 NIPKSLANCKLMDEFSVEGNQVSQLPDGLLASLSDLTTITLSRNAFTAYPSGGPAQFTNV 386

Query: 134 ------------------GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT-- 173
                              R  NL+      N +T+LP D+     M +L++  N+LT  
Sbjct: 387 YSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALPLDIGTWVNMVELNLGTNQLTKI 446

Query: 174 -------------VLSNNL-------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
                        +LSNNL       IA+   L  L   +N +  +P  IG L  L +L 
Sbjct: 447 PDDIQCLQSLEILILSNNLLKRIPASIANLRKLRVLDLEENKIESLPNEIGFLRDLQKLI 506

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN-QLKEYCVE- 271
           L  N++ S+P +I    +L    +G N L+ LP E+G L  L +L ++ N  L     E 
Sbjct: 507 LQSNQVTSLPRAIGHLTNLTYLSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPFEL 566

Query: 272 ACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGNPLRTL 313
           A    LS++ + N  LS +PPEI  G  + + + L    P R++
Sbjct: 567 ALCTNLSIMSIENCPLSQIPPEIVAGGPSLVIQFLKMQGPYRSM 610



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 35/220 (15%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           +T L  SK+ +  +P T+  L+ L+   L+ N+++++P  I    +L    +  N+L++L
Sbjct: 131 VTRLDLSKSSITNLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLANLETLALSENSLTSL 190

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           P  L  L  L  LDL  N+L E                      +P  + K+T+L  L L
Sbjct: 191 PNTLENLKSLRVLDLRHNKLSE----------------------IPDVVYKLTSLTTLFL 228

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N +R +  ++ N     +L      L EN+  E       L+ + T          + 
Sbjct: 229 RFNRVRYVSDNIRNLTNLTMLS-----LRENKIKELPAGIGKLVNLIT--------FDVS 275

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             +L  +P EI    +++ LDL  N + ++P  + +  SL
Sbjct: 276 HNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLISL 315


>gi|255078866|ref|XP_002503013.1| predicted protein [Micromonas sp. RCC299]
 gi|226518279|gb|ACO64271.1| predicted protein [Micromonas sp. RCC299]
          Length = 423

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 176/364 (48%), Gaps = 38/364 (10%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +   L KL L  N++  +  ++  L  L  L + +N+L+ LPA IG+L  L+ L +  N 
Sbjct: 14  QLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQLTSLRELYLCNNK 73

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +   P EIG  TAL +     NQL  +P+ +G   +L +    +N +T +P ++   + +
Sbjct: 74  LTIAPAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLTGVPAEIVQLTTL 133

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             L + GN+LT L    I   T LT L    N L  +P  IG L+ L  L LH N++ S+
Sbjct: 134 EALWLHGNQLTSLPAE-IGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEALYLHGNQLTSV 192

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P+ I    SL +  + +N L+++PAE+G+L+ L  L L  NQL     E  QL  L+ L 
Sbjct: 193 PAEIGQLTSLEKLELYDNQLTSVPAEIGQLTSLKALWLFGNQLTSLPAEIGQLTSLTGLR 252

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           L NN L+ LP EIG++T+L  L L  N L ++         PA +  L S          
Sbjct: 253 LYNNRLTSLPAEIGQLTSLEALWLHDNQLTSV---------PAEIGQLTSL--------- 294

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                             KEL L G  L+++P+EI +   +  L L  N +  LP E+  
Sbjct: 295 ------------------KELWLHGNRLTSVPAEIGQLTSLGALSLYNNRLTSLPEEIGQ 336

Query: 402 CASL 405
             SL
Sbjct: 337 LTSL 340



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 200/417 (47%), Gaps = 27/417 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L  VP E+ +                LQ+L L +N +  L  ++  L  L  L
Sbjct: 21  LNLGRNHLTSVPAEIVQ-------------LTTLQELKLYNNQLTSLPAEIGQLTSLREL 67

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + +NKL+  PA IG+L  L  L +  N +  +P EIG  T+L +     NQL  +P+ +
Sbjct: 68  YLCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLTGVPAEI 127

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +   L       N +TSLP ++   + ++ L +  N+LT L    I   T L  L    
Sbjct: 128 VQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAE-IGQLTSLEALYLHG 186

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L +L+L+ N++ S+P+ I    SL   ++  N L++LPAE+G+L+
Sbjct: 187 NQLTSVPAEIGQLTSLEKLELYDNQLTSVPAEIGQLTSLKALWLFGNQLTSLPAEIGQLT 246

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L++N+L     E  QL  L  L L +N L+ +P EIG++T+L++L L GN L +
Sbjct: 247 SLTGLRLYNNRLTSLPAEIGQLTSLEALWLHDNQLTSVPAEIGQLTSLKELWLHGNRLTS 306

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE----------L 362
           + + +    +   L    +RL    +     T  D + +     ++  E          L
Sbjct: 307 VPAEIGQLTSLGALSLYNNRLTSLPEEIGQLTSLDRLYLGRNQLMSVPEEIGQLSSLLWL 366

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS--CASLQVKFSDLVTNKE 417
            L    L++IP+EI +   ++ LDLS N +  +P  +     A   V+  D VT  E
Sbjct: 367 YLGSNQLTSIPAEIAQLTSLSVLDLSGNQLTSVPAAIRELRAAGCDVRMDDGVTVGE 423



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 149/307 (48%), Gaps = 38/307 (12%)

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N +  +P EIG  T+L K +   N L  +P+ + +   L + K  NN +TSLP ++   +
Sbjct: 3   NQLTSLPAEIGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQLT 62

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            + +L +  NKLT+     I   T LTEL+   N L  +P  IG L+ L  L LH N++ 
Sbjct: 63  SLRELYLCNNKLTIAPAE-IGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLT 121

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
            +P+ I    +L   ++  N L++LPAE+G+L+ L  L L++N+L     E  QL  L  
Sbjct: 122 GVPAEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEA 181

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L  N L+ +P EIG++T+L KL L  N L ++         PA +  L S        
Sbjct: 182 LYLHGNQLTSVPAEIGQLTSLEKLELYDNQLTSV---------PAEIGQLTSL------- 225

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                               K L L G  L+++P+EI +   +T L L  N +  LP E+
Sbjct: 226 --------------------KALWLFGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEI 265

Query: 400 SSCASLQ 406
               SL+
Sbjct: 266 GQLTSLE 272



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 23/269 (8%)

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
           GN+LT L    I   T LT+L   +N L  +P  I  L+ L  L L+ N++ S+P+ I  
Sbjct: 2   GNQLTSLPAE-IGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQ 60

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             SL E Y+ NN L+  PAE+G+L+ L  L LH NQL     E   L  L  L L +N L
Sbjct: 61  LTSLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQL 120

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           +G+P EI ++TTL  L L GN L +L + +    +   L+   +RL         T+   
Sbjct: 121 TGVPAEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRL---------TSLPA 171

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            I   T L    + L L G  L+++P+EI +   + KL+L  N +  +P E+    SL+ 
Sbjct: 172 EIGQLTSL----EALYLHGNQLTSVPAEIGQLTSLEKLELYDNQLTSVPAEIGQLTSLKA 227

Query: 408 --KFSDLVTN------KESCISGCYLYWN 428
              F + +T+      + + ++G  LY N
Sbjct: 228 LWLFGNQLTSLPAEIGQLTSLTGLRLYNN 256


>gi|456822986|gb|EMF71456.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/269 (35%), Positives = 145/269 (53%), Gaps = 2/269 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L  ++R L  L +L++ +N+L+ LP  IG+L  L+ L +S+N +  
Sbjct: 116 NLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       +QL  LP  +G+  NL +   S+N +T LP+++     + + 
Sbjct: 176 LPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRF 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+LT+L    I     L EL    N L  +P+ IG L  L R  L  N+   +P  
Sbjct: 236 VLDNNQLTILPKE-IGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E Y+  N L+  P E+GKL KL TL+L +NQL     E  QL+ L  L+LS 
Sbjct: 295 IGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSE 354

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N L  +P EIG++  L+ L L+ N L TL
Sbjct: 355 NQLKTIPQEIGQLQNLKSLDLSNNQLTTL 383



 Score =  147 bits (372), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 185/391 (47%), Gaps = 22/391 (5%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ LIL+   +  L ++++ L  L +L++ HN+L+ LP  IG+L  L+ L + +N + 
Sbjct: 46  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     ++NQL  LP+ + +  NL      NN +T LP+++     + +
Sbjct: 106 ALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQE 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L   ++ L  +P+ IG L  L  LDL  N++  +P 
Sbjct: 166 LYLSYNQLTTLPKE-IGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L  F + NN L+ LP E+GKL  L  L L  NQL     E  QL+ L    L 
Sbjct: 225 EIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLD 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN  + LP EIG++  L++L L+ N L T    +       L K     L  N+ +    
Sbjct: 285 NNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEI-----GKLQKLQTLNLWNNQLTTLPE 339

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
             E L  + T        L+L    L  IP EI +   +  LDLS N +  LP E+    
Sbjct: 340 EIEQLKNLKT--------LNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLK 391

Query: 404 SLQV------KFSDLVTNK-ESCISGCYLYW 427
           +LQ       +FS     K    +  C +Y+
Sbjct: 392 NLQTLNLWNNQFSSQEKEKIRKLLPKCQIYF 422



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 150/301 (49%), Gaps = 20/301 (6%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           ++  +    L+L N  L  +P E+              +  +LQ+L L++N +  L +++
Sbjct: 134 IRQLKNLQMLDLGNNQLTILPKEI-------------GQLQNLQELYLSYNQLTTLPKEI 180

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L +L++  ++L+ LP  IG+L  L  LD+S N +  +P EIG    L +F   +N
Sbjct: 181 GKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNN 240

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL  LP  +G+  NL +    +N +T LP+++     + +  ++ N+ T+L    I    
Sbjct: 241 QLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKE-IGQLQ 299

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L EL  S N L   P+ IG L +L  L+L  N++ ++P  I    +L    +  N L  
Sbjct: 300 NLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKT 359

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           +P E+G+L  L +LDL +NQL     E  QL+ L  L+L NN  S    E      +RKL
Sbjct: 360 IPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLKNLQTLNLWNNQFSSQEKE-----KIRKL 414

Query: 304 L 304
           L
Sbjct: 415 L 415


>gi|421130081|ref|ZP_15590279.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410358680|gb|EKP05831.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 515

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 194/406 (47%), Gaps = 25/406 (6%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            LNL+   L  +P E+   KN  +    D  +  +        +L++L L  N +  L  
Sbjct: 73  ELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPN 132

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L VL ++HN+   +P  IG+L  L++L +  N +  +P+EIG    L      
Sbjct: 133 EIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLYLGNNQLTALPNEIGQIQNLQFLYLG 192

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           SN+L  LP  +G+  NL      +N  T LP+++     + +L +  N+LT L N  I  
Sbjct: 193 SNRLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNE-IGQ 251

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L  + N    + + IG L  L  L+L  N++ ++P+ I    +L   Y+GNN L
Sbjct: 252 LKNLRVLELTHNQFKTISKEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQL 311

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           +ALP E+G+L  L +L L +NQL     E  QL +L  L LS N L+ LP EIG++  L+
Sbjct: 312 TALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQKLQELYLSTNRLTTLPNEIGQLQNLQ 371

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L L  N L  L + +        L YLRS       +  +T  +D+  +        K 
Sbjct: 372 ELYLGSNQLTILPNEIGQLKNLQTL-YLRS-------NRLTTLSKDIEQLQ-----NLKS 418

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           L L    L+  P EI +   +  LDL  N +  LP E+    +LQV
Sbjct: 419 LDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQV 464



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L  N +  L  ++  L  L VL ++HN+   +   IG+L  L++L++ +N +  
Sbjct: 231 NLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTISKEIGQLKNLQTLNLGYNQLTA 290

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L      +NQL  LP+ +G+  NL      NN +T+LP ++    K+ +L
Sbjct: 291 LPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQKLQEL 350

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L N  I     L EL    N L  +P  IG L  L  L L  NR+ ++   
Sbjct: 351 YLSTNRLTTLPNE-IGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD 409

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + NN L+  P E+ +L  L  LDL SNQL     E  QL+ L V +L+N
Sbjct: 410 IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNN 469

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP EIG++  L++L L  N L
Sbjct: 470 NQLTTLPKEIGQLQNLQELYLIDNQL 495



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 182/366 (49%), Gaps = 15/366 (4%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++  N   
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+     L +    SN+L  LP+ +G+  NL   + ++N   ++P+++     +  
Sbjct: 106 ILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQT 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L N  I     L  L    N L  +P+ IG L  L +L+L+ N+   +P 
Sbjct: 166 LYLGNNQLTALPNE-IGQIQNLQFLYLGSNRLTILPKEIGQLKNLRKLNLYDNQFTILPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            +    +L E Y+G+N L+ LP E+G+L  L  L+L  NQ K    E  QL+ L  L+L 
Sbjct: 225 EVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTISKEIGQLKNLQTLNLG 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP EIG++  L+ L L  N L  L + +        L+ L+S    N    A  
Sbjct: 285 YNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEI------GQLQNLQSLYLGNNQLTALP 338

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            +   I    +L    +EL L    L+ +P+EI +   + +L L  N +  LP E+    
Sbjct: 339 NE---IGQLQKL----QELYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLK 391

Query: 404 SLQVKF 409
           +LQ  +
Sbjct: 392 NLQTLY 397



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 154/312 (49%), Gaps = 12/312 (3%)

Query: 13  SLNLSNRSLRDVPNEVYK----NFDEAGEG------DKWWEAVDLQKLILAHNNIEKLKE 62
           +L L N  L  +PNE+ +     F   G         +  +  +L+KL L  N    L +
Sbjct: 165 TLYLGNNQLTALPNEIGQIQNLQFLYLGSNRLTILPKEIGQLKNLRKLNLYDNQFTILPK 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +  N+L+ LP  IG+L  L+ L+++ N    I  EIG    L   +  
Sbjct: 225 EVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTISKEIGQLKNLQTLNLG 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP+ +G+  NL      NN +T+LP ++     +  L +  N+LT L N  I  
Sbjct: 285 YNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQNLQSLYLGNNQLTALPNE-IGQ 343

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L EL  S N L  +P  IG L  L  L L  N++  +P+ I    +L   Y+ +N L
Sbjct: 344 LQKLQELYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRL 403

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + L  ++ +L  L +LDL +NQL  +  E  QL+ L VLDL +N L+ LP EIG++  L+
Sbjct: 404 TTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQ 463

Query: 302 KLLLTGNPLRTL 313
              L  N L TL
Sbjct: 464 VFELNNNQLTTL 475



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 13/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LS   L  +PNE+              +  +LQ+L L  N +  L  ++  L  L  
Sbjct: 349 ELYLSTNRLTTLPNEI-------------GQLQNLQELYLGSNQLTILPNEIGQLKNLQT 395

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ L   I +L  LKSLD+  N +   P EI     L   D  SNQL  LP  
Sbjct: 396 LYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKE 455

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           +G+  NL  F+ +NN +T+LP+++     + +L +  N+L+
Sbjct: 456 IGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLS 496


>gi|418744841|ref|ZP_13301186.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794172|gb|EKR92082.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 485

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/269 (35%), Positives = 148/269 (55%), Gaps = 2/269 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L E++ NL  L  L++SHN+L+ LP  IG L  L++LD++ N +  
Sbjct: 133 NLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKT 192

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EI     L      +N+L  LP  +G   NL +   ++N  T+LPE++ +  K+ KL
Sbjct: 193 LPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKL 252

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  ++LT L    I +   L EL  + N    +PE IG+L +L  LDL+ +R+ ++P  
Sbjct: 253 SLAHSRLTTLPKE-IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKE 311

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I     L +  +  N L  LP E+GKL  L  L L+ N+L     E   L+ L  L L +
Sbjct: 312 IGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGS 371

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N L+ LP +IG +  L++L L GN L+TL
Sbjct: 372 NQLTTLPEKIGNLQKLQELSLAGNRLKTL 400



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 171/357 (47%), Gaps = 53/357 (14%)

Query: 34  EAGEGDKWW-------EAVDLQKLILA----HNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           EA E DK++          D++ L L      N +  L +++ NL  L  LN+  N+L+ 
Sbjct: 87  EADEKDKYYNLTEALQHPTDVRVLDLGPPEGGNKLTTLPKEIGNLQNLQELNLEGNQLTT 146

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG L  L++LD+S N +  +P EIG+   L   D + NQLK LP  + +   L   
Sbjct: 147 LPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEAL 206

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              NN +T+LP+++ +   + +L++  N+ T L                        PE 
Sbjct: 207 HLGNNELTTLPKEIGNLQNLQELNLNSNQFTTL------------------------PEE 242

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG+L +L +L L  +R+ ++P  I    +L E  + +N  + LP E+G L KL TLDL+ 
Sbjct: 243 IGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNY 302

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           ++L     E  +L +L  L+L  N L  LP EIGK+  L+ L L GN L TL   + N  
Sbjct: 303 SRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGN-- 360

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEI 376
               L+ L+         E S     L T+  ++    K  ELSL G  L  +P EI
Sbjct: 361 ----LQNLQ---------ELSLGSNQLTTLPEKIGNLQKLQELSLAGNRLKTLPKEI 404



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 161/328 (49%), Gaps = 40/328 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS+  L  +P E+       G   K      LQ L LA N ++ L +++  L  L  
Sbjct: 159 TLDLSHNRLTTLPKEI-------GNLQK------LQTLDLAQNQLKTLPKEIEKLQKLEA 205

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ +N+L+ LP  IG L  L+ L+++ N    +P+EIG+   L K   + ++L  LP  
Sbjct: 206 LHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKE 265

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL +   ++N  T+LPE++ +  K+  LD+  ++LT L    I     L +L   
Sbjct: 266 IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKE-IGKLQKLQKLNLY 324

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           KN L  +P+ IG L  L  L L+ N + ++P  I    +L E  +G+N L+ LP ++G L
Sbjct: 325 KNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNL 384

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR------------------------LSVLDLSNNSLS 288
            KL  L L  N+LK    E   L+                        L  L+LS NSL 
Sbjct: 385 QKLQELSLAGNRLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSLI 444

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
             P EIGK+  L+ L L GNP   LRS 
Sbjct: 445 SFPEEIGKLQKLKWLYLGGNPF--LRSQ 470


>gi|149173780|ref|ZP_01852409.1| putative lipoprotein [Planctomyces maris DSM 8797]
 gi|148847310|gb|EDL61644.1| putative lipoprotein [Planctomyces maris DSM 8797]
          Length = 470

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 179/362 (49%), Gaps = 16/362 (4%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           ++ N++ +L  ++ NL  LT LNVS N +  LP  IG L  LK LD+S N +M++  E G
Sbjct: 74  ISDNSLSELSPEIGNLKNLTWLNVSDNSIRYLPDEIGNLSQLKELDLSENKLMRLDPEFG 133

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
             ++L + + SSN LK LP   G   NL D    +N I SLP       +++ L + GN+
Sbjct: 134 QLSSLERLNLSSNWLKTLPPEFGMLENLRDLNLDSNSIASLPPVFEKLHQLNSLSMNGNE 193

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  ++++ I     L  L A KN +  +P  IG+L  L  LDL +N+I  +PS I    +
Sbjct: 194 MVTVTDS-IGGLKKLRYLYALKNRIKELPPQIGNLENLETLDLRENQIEFLPSEIGNLRN 252

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    +  N L++LP E+GKL  L  LDL  N L     E   L  L  L L NN+L+ +
Sbjct: 253 LKRLDLFKNHLTSLPPEIGKLKNLKDLDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLTSI 312

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P  I ++  + +L L  N L +L     N  +   L +L        D    T+    I 
Sbjct: 313 PASIIRLKKIPELYLQSNQLSSLPPEFGNHLSLGGL-FL--------DQNQFTSIPPEIW 363

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL-QVKF 409
               L    + LS     ++ +P+EI    ++  LDL  N I++LPPE+S   SL    F
Sbjct: 364 KLQNL----ERLSFADNQITELPAEIGRLKKLRSLDLIGNPIKQLPPEISQLTSLSSFSF 419

Query: 410 SD 411
            D
Sbjct: 420 DD 421



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 155/312 (49%), Gaps = 14/312 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGD-----------KWWEAVDLQKLILAHNNIEKLKE 62
           LN+S+ S+R +P+E+  N  +  E D           ++ +   L++L L+ N ++ L  
Sbjct: 95  LNVSDNSIRYLPDEI-GNLSQLKELDLSENKLMRLDPEFGQLSSLERLNLSSNWLKTLPP 153

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           +   L  L  LN+  N ++ LP    +LH L SL ++ N ++ + D IG    L      
Sbjct: 154 EFGMLENLRDLNLDSNSIASLPPVFEKLHQLNSLSMNGNEMVTVTDSIGGLKKLRYLYAL 213

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N++KELP  +G   NL       N I  LP ++ +   + +LD+  N LT L    I  
Sbjct: 214 KNRIKELPPQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPE-IGK 272

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P+  G L+ L +L L  N + SIP+SI     + E Y+ +N L
Sbjct: 273 LKNLKDLDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYLQSNQL 332

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           S+LP E G    LG L L  NQ      E  +L+ L  L  ++N ++ LP EIG++  LR
Sbjct: 333 SSLPPEFGNHLSLGGLFLDQNQFTSIPPEIWKLQNLERLSFADNQITELPAEIGRLKKLR 392

Query: 302 KLLLTGNPLRTL 313
            L L GNP++ L
Sbjct: 393 SLDLIGNPIKQL 404



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 115/222 (51%), Gaps = 2/222 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L    N++ ELP  IG L  L++LD+  N I  +P EIG+   L + D   N L  L
Sbjct: 207 LRYLYALKNRIKELPPQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSL 266

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G+  NL D    +N +TSLP++  D + + KL ++ N LT +  ++I     + EL
Sbjct: 267 PPEIGKLKNLKDLDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLTSIPASIIR-LKKIPEL 325

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N L+ +P   G+   L  L L QN+  SIP  I    +L      +N ++ LPAE+
Sbjct: 326 YLQSNQLSSLPPEFGNHLSLGGLFLDQNQFTSIPPEIWKLQNLERLSFADNQITELPAEI 385

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           G+L KL +LDL  N +K+   E  QL  LS     + +LS L
Sbjct: 386 GRLKKLRSLDLIGNPIKQLPPEISQLTSLSSFSFDDPTLSDL 427



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 155/358 (43%), Gaps = 65/358 (18%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           +D+S +S+   P    + T +   + S N L EL   +G   NL+    S+N I  LP++
Sbjct: 53  IDLSDDSLHLFP----TDTKVTWLNISDNSLSELSPEIGNLKNLTWLNVSDNSIRYLPDE 108

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           + + S++ +LD+  NKL  L        + L  L  S N L  +P   G L  L  L+L 
Sbjct: 109 IGNLSQLKELDLSENKLMRLDPEF-GQLSSLERLNLSSNWLKTLPPEFGMLENLRDLNLD 167

Query: 216 QNRILSIP-----------------------SSISGCCSLAEFYMGNNALSALPAELGKL 252
            N I S+P                        SI G   L   Y   N +  LP ++G L
Sbjct: 168 SNSIASLPPVFEKLHQLNSLSMNGNEMVTVTDSIGGLKKLRYLYALKNRIKELPPQIGNL 227

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L TLDL  NQ++    E   LR L  LDL  N L+ LPPEIGK+  L+ L L  N L 
Sbjct: 228 ENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLKNLKDLDLMHNDLT 287

Query: 312 TL-----------RSSLVNG---PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
           +L           + SL N      PA +  L+ ++PE            L   + +LS 
Sbjct: 288 SLPKEFGDLTGLEKLSLQNNNLTSIPASIIRLK-KIPE------------LYLQSNQLSS 334

Query: 358 TSKE----LSLEGM-----NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              E    LSL G+       ++IP EIW+   + +L  + N I ELP E+     L+
Sbjct: 335 LPPEFGNHLSLGGLFLDQNQFTSIPPEIWKLQNLERLSFADNQITELPAEIGRLKKLR 392



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 63/138 (45%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           ++ +   L+KL L +NN+  +   +  L  +  L +  N+LS LP   G    L  L + 
Sbjct: 292 EFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYLQSNQLSSLPPEFGNHLSLGGLFLD 351

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N    IP EI     L +   + NQ+ ELP+ +GR   L       N I  LP +++  
Sbjct: 352 QNQFTSIPPEIWKLQNLERLSFADNQITELPAEIGRLKKLRSLDLIGNPIKQLPPEISQL 411

Query: 160 SKMSKLDVEGNKLTVLSN 177
           + +S    +   L+ L++
Sbjct: 412 TSLSSFSFDDPTLSDLNH 429


>gi|255073607|ref|XP_002500478.1| predicted protein [Micromonas sp. RCC299]
 gi|226515741|gb|ACO61736.1| predicted protein [Micromonas sp. RCC299]
          Length = 383

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 184/364 (50%), Gaps = 31/364 (8%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           +L  L  L  LN+  N+L+ LPA IG+L  L+SL++ +N +  +P EI    +L      
Sbjct: 24  ELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQLASLEGLYLG 83

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  +P+ +G+  +L D     N +TS+P ++   + +++LD+  N+LT +    I  
Sbjct: 84  GNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQLTSVPAE-IWR 142

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            T LT L  + N L  +P  I  L+ L  L L  N + S+P+ I    +L +  +  N L
Sbjct: 143 LTSLTYLNLNDNQLTSVPAEIRQLTSLRELWLSANHLTSVPAEIWQLAALVKLSVTENQL 202

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +++PAE+ +L+ L  L LH NQL     E  QL  L+ L L +N L+ +P EIG++ +L 
Sbjct: 203 TSVPAEIWQLTSLTELYLHGNQLTSVPAEIGQLTSLTALSLYDNQLTSVPAEIGQIRSLV 262

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           KL L GN L +L         PA +  LR+ +    D    T+    I   T L+    E
Sbjct: 263 KLSLHGNRLTSL---------PAEIGQLRALVEFELDRNLLTSVPAEIGHLTSLT----E 309

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCIS 421
           LSL G  L+++PSEI +   + +L LS N +  +P  +                +E   +
Sbjct: 310 LSLHGNQLTSVPSEIGQLTSLGELSLSGNQLTSVPAAM----------------RELEAA 353

Query: 422 GCYL 425
           GCY+
Sbjct: 354 GCYM 357



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 150/274 (54%), Gaps = 6/274 (2%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N +  +  ++  L  L  L +  N+L+ +PA IG+L  L+ L +  N +  +
Sbjct: 54  LESLELGYNELTSVPVEIWQLASLEGLYLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSV 113

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+L + D   NQL  +P+ + R  +L+    ++N +TS+P ++   + + +L 
Sbjct: 114 PTEIGQLTSLTQLDLRDNQLTSVPAEIWRLTSLTYLNLNDNQLTSVPAEIRQLTSLRELW 173

Query: 167 VEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           +  N LT +   +   W +  L +L  ++N L  +P  I  L+ L  L LH N++ S+P+
Sbjct: 174 LSANHLTSVPAEI---WQLAALVKLSVTENQLTSVPAEIWQLTSLTELYLHGNQLTSVPA 230

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-LDLS 283
            I    SL    + +N L+++PAE+G++  L  L LH N+L     E  QLR  V  +L 
Sbjct: 231 EIGQLTSLTALSLYDNQLTSVPAEIGQIRSLVKLSLHGNRLTSLPAEIGQLRALVEFELD 290

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            N L+ +P EIG +T+L +L L GN L ++ S +
Sbjct: 291 RNLLTSVPAEIGHLTSLTELSLHGNQLTSVPSEI 324



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 123/253 (48%), Gaps = 17/253 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L  VP E+             W    L  L L  N +  +  ++R L  L  L
Sbjct: 126 LDLRDNQLTSVPAEI-------------WRLTSLTYLNLNDNQLTSVPAEIRQLTSLREL 172

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +S N L+ +PA I +L  L  L V+ N +  +P EI   T+L +     NQL  +P+ +
Sbjct: 173 WLSANHLTSVPAEIWQLAALVKLSVTENQLTSVPAEIWQLTSLTELYLHGNQLTSVPAEI 232

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L+     +N +TS+P ++     + KL + GN+LT L    I     L E    +
Sbjct: 233 GQLTSLTALSLYDNQLTSVPAEIGQIRSLVKLSLHGNRLTSLPAE-IGQLRALVEFELDR 291

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P  IG L+ L  L LH N++ S+PS I    SL E  +  N L+++PA + +L 
Sbjct: 292 NLLTSVPAEIGHLTSLTELSLHGNQLTSVPSEIGQLTSLGELSLSGNQLTSVPAAMRELE 351

Query: 254 KLG---TLDLHSN 263
             G    LDL S+
Sbjct: 352 AAGCYMDLDLDSD 364



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 106/213 (49%), Gaps = 14/213 (6%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            L   +P  +G LS L+ L+L  N++  +P+ I    SL    +G N L+++P E+ +L+
Sbjct: 16  GLTGAVPAELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQLA 75

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  QL  L  L L  N L+ +P EIG++T+L +L L  N L +
Sbjct: 76  SLEGLYLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQLTS 135

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +         PA +  L S    N +    T+    I   T L    +EL L   +L+++
Sbjct: 136 V---------PAEIWRLTSLTYLNLNDNQLTSVPAEIRQLTSL----RELWLSANHLTSV 182

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           P+EIW+   + KL ++ N +  +P E+    SL
Sbjct: 183 PAEIWQLAALVKLSVTENQLTSVPAEIWQLTSL 215



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 38/201 (18%)

Query: 208 RLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           R++ L+L +  +  ++P+ +    +L +  +G N L+ LPAE+G+L+ L +L+L  N+L 
Sbjct: 6   RVVELELKEFGLTGAVPAELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELT 65

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
              VE  QL  L  L L  N L+ +P EIG++T+L  L L  N L ++       PT   
Sbjct: 66  SVPVEIWQLASLEGLYLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSV-------PTE-- 116

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
                                  I   T L+    +L L    L+++P+EIW    +T L
Sbjct: 117 -----------------------IGQLTSLT----QLDLRDNQLTSVPAEIWRLTSLTYL 149

Query: 386 DLSRNSIQELPPELSSCASLQ 406
           +L+ N +  +P E+    SL+
Sbjct: 150 NLNDNQLTSVPAEIRQLTSLR 170


>gi|110763972|ref|XP_395550.3| PREDICTED: leucine-rich repeat-containing protein 40-like [Apis
           mellifera]
          Length = 602

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 209/446 (46%), Gaps = 81/446 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVY----------KNF----DEAGEGDKWWE------ 43
           I+ +AR +G+LNLS++ L  VP+ V+          KN     D   + ++WWE      
Sbjct: 30  IIISARKNGNLNLSSKGLFTVPDRVWTINDLTEEEIKNLHVELDYIHDNERWWEQEPLKM 89

Query: 44  ---------AVD--------LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
                    A+D        L  L L +N +E L  ++ NL  L +LN+S+NKL +LP  
Sbjct: 90  LDLSCNSLKAIDSKIECLTELTTLYLHNNLLEDLPIEIGNLKKLEILNLSNNKLEKLPHE 149

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
             +L  L+ L +  N+I ++    G    L   D S N L ELP  +G  + L     ++
Sbjct: 150 FYKLIELRQLSLKNNNIKQLDPAFGDFIMLTYLDLSYNNLTELPIGMGYLVRLISLDLNH 209

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +  LP DL +   + KL+   N L +L                           +G L
Sbjct: 210 NILKELPPDLTNMRALQKLNASYNDLEILP-------------------------PLGEL 244

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQL 265
            ++  + L  N++ + P  +SGC  L   ++ +N ++ +    L  + +L TL L +NQ+
Sbjct: 245 RKVETVMLQTNKLTTFP-DMSGCIQLRILHLADNNITEIDMSCLEGVGQLKTLTLGNNQI 303

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
           +    E  +L  L + DLS N ++ +P  IG M  +++L++ GN ++ +R+ ++   T  
Sbjct: 304 ESIPEEIIKLVYLEIFDLSYNKITLIPEHIGLMPNIKQLIIDGNDIKNIRTDIIRCGTSR 363

Query: 325 LLKYLRSRLPE-NEDSEASTT-------KEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +LKY++  L   N DS+   T         D  TM      ++K LSL G NL+ IP E+
Sbjct: 364 ILKYIQQGLKSTNLDSKKHVTLNTSTNIYPDRYTMH-----STKLLSLAGQNLTEIPQEV 418

Query: 377 WE---AGEITKLDLSRNSIQELPPEL 399
            E     ++  +DLSRN+   LP EL
Sbjct: 419 LENACKADVGTVDLSRNNFSTLPDEL 444



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 188/447 (42%), Gaps = 95/447 (21%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLSN  L  +P+E YK              ++L++L L +NNI++L     +  +LT L
Sbjct: 136 LNLSNNKLEKLPHEFYK-------------LIELRQLSLKNNNIKQLDPAFGDFIMLTYL 182

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S+N L+ELP  +G L  L SLD++ N + ++P ++ +  AL K + S N L+ LP  L
Sbjct: 183 DLSYNNLTELPIGMGYLVRLISLDLNHNILKELPPDLTNMRALQKLNASYNDLEILPP-L 241

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    +       N +T+ P D++ C ++  L +  N +T +  + +     L  L    
Sbjct: 242 GELRKVETVMLQTNKLTTFP-DMSGCIQLRILHLADNNITEIDMSCLEGVGQLKTLTLGN 300

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +PE I  L  L   DL  N+I  IP  I    ++ +  +  N +  +  ++ +  
Sbjct: 301 NQIESIPEEIIKLVYLEIFDLSYNKITLIPEHIGLMPNIKQLIIDGNDIKNIRTDIIRCG 360

Query: 254 ------------KLGTLD-------------------LHSNQL------------KEYCV 270
                       K   LD                   +HS +L            +E   
Sbjct: 361 TSRILKYIQQGLKSTNLDSKKHVTLNTSTNIYPDRYTMHSTKLLSLAGQNLTEIPQEVLE 420

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            AC+  +  +DLS N+ S LP E+  +T +  L LT N L  +   +         KYL+
Sbjct: 421 NACKADVGTVDLSRNNFSTLPDELHIITKVADLKLTSNQLTHIPEWICEK-----YKYLQ 475

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                                          L L    L ++PS I     + +L++S N
Sbjct: 476 I------------------------------LDLSKNCLESLPSNIGLLKYLQELNISFN 505

Query: 391 SIQELPPELSSCASLQVKFS--DLVTN 415
             +E+P  +   +SL++  +  +L+TN
Sbjct: 506 RYKEIPESVYDVSSLEILIANDNLITN 532



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 152/331 (45%), Gaps = 63/331 (19%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N IE + E++  L  L + ++S+NK++ +P  IG +  +K L +  N I  I
Sbjct: 293 LKTLTLGNNQIESIPEEIIKLVYLEIFDLSYNKITLIPEHIGLMPNIKQLIIDGNDIKNI 352

Query: 107 PDEI---GSATAL-----------------VKFDCSSN-------------------QLK 127
             +I   G++  L                 V  + S+N                    L 
Sbjct: 353 RTDIIRCGTSRILKYIQQGLKSTNLDSKKHVTLNTSTNIYPDRYTMHSTKLLSLAGQNLT 412

Query: 128 ELPSSL--GRC-LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           E+P  +    C  ++     S N  ++LP++L   +K++ L +  N+LT +   +   + 
Sbjct: 413 EIPQEVLENACKADVGTVDLSRNNFSTLPDELHIITKVADLKLTSNQLTHIPEWICEKYK 472

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L  SKN L  +P  IG L  L  L++  NR   IP S+    SL E  + N+ L  
Sbjct: 473 YLQILDLSKNCLESLPSNIGLLKYLQELNISFNRYKEIPESVYDVSSL-EILIANDNL-- 529

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
                  ++ +  L L   Q           +L++L+L+NN++  +PPE+G +  LR L 
Sbjct: 530 -------ITNIDILSLQKLQ-----------KLTILNLANNNIGYIPPELGNLKNLRNLS 571

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           L+GN  +  R +++   T  +L YLR+R+P+
Sbjct: 572 LSGNCFKQPRQAILMKSTEEILAYLRNRIPQ 602



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 37/168 (22%)

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N+L A+ +++  L++L TL LH+N L++  +E   L+ L +L+LSNN L  LP E  K+ 
Sbjct: 95  NSLKAIDSKIECLTELTTLYLHNNLLEDLPIEIGNLKKLEILNLSNNKLEKLPHEFYKLI 154

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            LR+L L  N ++ L         PA   ++                     M T L ++
Sbjct: 155 ELRQLSLKNNNIKQL--------DPAFGDFI---------------------MLTYLDLS 185

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                    NL+ +P  +     +  LDL+ N ++ELPP+L++  +LQ
Sbjct: 186 YN-------NLTELPIGMGYLVRLISLDLNHNILKELPPDLTNMRALQ 226


>gi|418707316|ref|ZP_13268142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772363|gb|EKR47551.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 424

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 179/376 (47%), Gaps = 23/376 (6%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG+L  L+ LD+S N ++ +P EI     L   D  SNQL  LP 
Sbjct: 51  VLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPK 110

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL +   SNN +T+ P+++    K+  L++  N++  +    I     L  L  
Sbjct: 111 EIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKE-IEKLQKLQSLYL 169

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L +L  L L  N+I ++P  I     L   Y+  N L+ LP E+ K
Sbjct: 170 PNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEK 229

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL +L L +NQL     E  QL+ L VL L+NN L+ +P EIG +  L+ L L  N L
Sbjct: 230 LQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQL 289

Query: 311 RTLRSSLVNGPTPALLKYLRSR---LPE-----NEDSEASTTKEDLITMATRLSVTS--K 360
            T+   +       +L    ++   LP+         E   +   L T+   +      +
Sbjct: 290 TTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQ 349

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV------KFSDLVT 414
           EL L    L+ IP EI +   + +L LS N +  +P E+    +LQ       +FS  + 
Sbjct: 350 ELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFS--IE 407

Query: 415 NKESC---ISGCYLYW 427
            KE     +  C +Y+
Sbjct: 408 EKERIRKLLPKCQIYF 423



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 128/253 (50%), Gaps = 14/253 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N  L  +P E+       G+  K      LQ L L++N I+ L +++  L  L  
Sbjct: 166 SLYLPNNQLTTLPQEI-------GKLQK------LQWLYLSYNQIKTLPQEIEKLQKLQW 212

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  I +L  L+SL +  N +  +P EIG    L     ++NQL  +P  
Sbjct: 213 LYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE 272

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL D    +N +T++P+++     +  LD+  N+LT+L    I     L EL  S
Sbjct: 273 IGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKE-IGKLQNLQELYLS 331

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++ +IP  I    +L E Y+ NN L  +P E+G+L
Sbjct: 332 NNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQL 391

Query: 253 SKLGTLDLHSNQL 265
             L TL L +NQ 
Sbjct: 392 QNLQTLYLRNNQF 404



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 13/161 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+N  L  +P E+                 +LQ L L  N +  + +++  L  L +L
Sbjct: 259 LFLNNNQLTTIPQEI-------------GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQML 305

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  L+ L +S N +  IP EIG    L +   S+NQL  +P  +
Sbjct: 306 DLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEI 365

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           G+  NL +   SNN + ++P+++     +  L +  N+ ++
Sbjct: 366 GQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSI 406


>gi|421127271|ref|ZP_15587495.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136024|ref|ZP_15596135.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019758|gb|EKO86572.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435361|gb|EKP84493.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 659

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 122/375 (32%), Positives = 195/375 (52%), Gaps = 16/375 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N++  L +++  L  L  L++S N L+ LP  +G+L  L+ L+++   +  
Sbjct: 72  NLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTT 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       NQL  LP  +G+  NL     +NN +T+LP ++     +  L
Sbjct: 132 LPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQML 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT+L    I     L EL  S N L  +P+ IG L  L RL+L+  ++ ++P  
Sbjct: 192 DLGNNQLTILPKE-IGQLQNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQKLTTLPKE 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +  N+L+ LP E+G+L  L  LDLH N+L    +E  QL+ L  LDL++
Sbjct: 251 IGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNS 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEA 341
           N L+ LP EI ++  L++L L  N L TL      L N  T  L+    + LP+ E  E 
Sbjct: 311 NKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPK-EIGEL 369

Query: 342 STTKEDLITMATRLSVTSKEL----SLEGMN-----LSAIPSEIWEAGEITKLDLSRNSI 392
              K  L  + T+L+   KE+    +L+ +N     L+ +P EI E   +  L+L  N +
Sbjct: 370 QNLK-TLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQL 428

Query: 393 QELPPELSSCASLQV 407
             LP E+    +L++
Sbjct: 429 TTLPKEIGELQNLEI 443



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 202/406 (49%), Gaps = 27/406 (6%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWW--------EAVDLQKLILAHNNIEKLKED 63
           L L+N  L  +P E+   KN      G+           +  +LQ+L L++N +  L ++
Sbjct: 168 LFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTILPKE 227

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  LN++  KL+ LP  IG+L  L+ LD+SFNS+  +P E+G    L + D   
Sbjct: 228 IGQLENLQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQ 287

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  +G+  NL +   ++N +T+LP+++     + +LD+  N+LT L   +    
Sbjct: 288 NRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQ 347

Query: 184 TMLT-ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            + T  LI ++  L  +P+ IG L  L  L+L   ++ ++P  I    +L    +    L
Sbjct: 348 NLKTLNLIVTQ--LTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQL 405

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+G+L  L TL+L  NQL     E  +L+ L +L L  N ++ LP EIG++  L+
Sbjct: 406 TTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQ 465

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N L TL   +  G    L      RL  +++   +  KE  I     L    +E
Sbjct: 466 WLGLHQNQLTTLPKEI--GQLQNL-----QRLDLHQNQLTTLPKE--IGQLQNL----QE 512

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           L L+   L+ +P EI +   +  LDL  N +  LP E+    SLQV
Sbjct: 513 LCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQV 558



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 161/334 (48%), Gaps = 38/334 (11%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ + KL+ LP  IG+L  L+ LD+SFNS+  +P EIG    L + D S N L  LP  
Sbjct: 53  LDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKE 112

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     ++  +T+LP+++     +  L +  N+LT L    I     L  L  +
Sbjct: 113 VGQLENLQRLNLNSQKLTTLPKEIGQLKNLQLLILYYNQLTALPKE-IGQLKNLKVLFLN 171

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  I  L  L  LDL  N++  +P  I    +L E Y+  N L+ LP E+G+L
Sbjct: 172 NNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTILPKEIGQL 231

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L+S +L     E  QLR L  LDLS NSL+ LP E+G++  L++L L  N L 
Sbjct: 232 ENLQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLA 291

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL         P  +  L++                            +EL L    L+ 
Sbjct: 292 TL---------PMEIGQLKN---------------------------LQELDLNSNKLTT 315

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +P EI +   + +LDL RN +  LP E+    +L
Sbjct: 316 LPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNL 349



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 182/365 (49%), Gaps = 21/365 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L  ++R L  L +L++ +N+L+ LP  IG+L  L+ L +S+N +  
Sbjct: 164 NLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTI 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L + + +S +L  LP  +G+  NL     S N +T+LP+++     + +L
Sbjct: 224 LPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+L  L    I     L EL  + N L  +P+ I  L  L  LDLH+N++ ++P  
Sbjct: 284 DLHQNRLATLPME-IGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKE 342

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +    L+ LP E+G+L  L TL+L   QL     E  +L+ L  L+L  
Sbjct: 343 IGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIV 402

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
             L+ LP EIG++  L+ L L  N L TL                   + E ++ E    
Sbjct: 403 TQLTTLPKEIGELQNLKTLNLLDNQLTTLPKE----------------IGELQNLEILVL 446

Query: 345 KEDLITMATRLSVTSKELSLEGMN---LSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
           +E+ IT   +     + L   G++   L+ +P EI +   + +LDL +N +  LP E+  
Sbjct: 447 RENRITALPKEIGQLQNLQWLGLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQ 506

Query: 402 CASLQ 406
             +LQ
Sbjct: 507 LQNLQ 511



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 140/269 (52%), Gaps = 2/269 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++R L  L  L++  N+L+ LP  IG+L  LK+L++    +  
Sbjct: 302 NLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTT 361

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +    QL  LP  +G   NL         +T+LP+++ +   +  L
Sbjct: 362 LPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTL 421

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT L    I     L  L+  +N +  +P+ IG L  L  L LHQN++ ++P  
Sbjct: 422 NLLDNQLTTLPKE-IGELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQLTTLPKE 480

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +  N L+ LP E+G+L  L  L L  NQL     E  QL+ L VLDL N
Sbjct: 481 IGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDN 540

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N L+ LP E+ ++ +L+ L L  N L TL
Sbjct: 541 NQLTTLPKEVLRLQSLQVLALGSNRLSTL 569



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 124/242 (51%), Gaps = 2/242 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  LN+   +L+ LP  IGEL  LK+L++  N +  +P EIG    L       N++  L
Sbjct: 395 LKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITAL 454

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G+  NL       N +T+LP+++     + +LD+  N+LT L    I     L EL
Sbjct: 455 PKEIGQLQNLQWLGLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKE-IGQLQNLQEL 513

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
              +N L  +P+ I  L  L  LDL  N++ ++P  +    SL    +G+N LS LP E+
Sbjct: 514 CLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEI 573

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L  L L SNQL     E  QL+ L  L L  N L+  P EI ++  L++L L  N
Sbjct: 574 GQLQNLQVLGLISNQLMTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 633

Query: 309 PL 310
           PL
Sbjct: 634 PL 635



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 1/221 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L+ L L  N +  L +++  L  L +L +  N+++ LP  IG+L  L+ L +  N 
Sbjct: 414 ELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQ 473

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG    L + D   NQL  LP  +G+  NL +     N +T+LP+++     +
Sbjct: 474 LTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 533

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD++ N+LT L   ++   + L  L    N L+ +P+ IG L  L  L L  N+++++
Sbjct: 534 RVLDLDNNQLTTLPKEVLRLQS-LQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLMTL 592

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           P  I    +L E  +  N L+  P E+ +L  L  L L+ N
Sbjct: 593 PKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLN 633



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 15/259 (5%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T LP+++     + +LD+  N LT L    I     L EL  S N L  +P+ +G L  
Sbjct: 60  LTILPKEIGQLQNLQRLDLSFNSLTTLPKE-IGQLRNLQELDLSFNSLTTLPKEVGQLEN 118

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RL+L+  ++ ++P  I    +L    +  N L+ALP E+G+L  L  L L++NQL   
Sbjct: 119 LQRLNLNSQKLTTLPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTL 178

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL+ L +LDL NN L+ LP EIG++  L++L L+ N L  L         P  + 
Sbjct: 179 PTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTIL---------PKEIG 229

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            L +    N +S+  TT    I     L      L L   +L+ +P E+ +   + +LDL
Sbjct: 230 QLENLQRLNLNSQKLTTLPKEIGQLRNLQW----LDLSFNSLTTLPKEVGQLENLQRLDL 285

Query: 388 SRNSIQELPPELSSCASLQ 406
            +N +  LP E+    +LQ
Sbjct: 286 HQNRLATLPMEIGQLKNLQ 304



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 66/128 (51%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L VL++ +N+L+ LP  +  L  L+ L +  N +  
Sbjct: 509 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 568

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP  +G+  NL +     N +T+ P+++     + +L
Sbjct: 569 LPKEIGQLQNLQVLGLISNQLMTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQEL 628

Query: 166 DVEGNKLT 173
            +  N L+
Sbjct: 629 HLYLNPLS 636



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 54/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L VL +  N+LS LP  IG+L  L+ L +  N +M 
Sbjct: 532 NLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLMT 591

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L +     NQL   P  + +  NL +     N ++S
Sbjct: 592 LPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 637



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 70/157 (44%), Gaps = 37/157 (23%)

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           K+ TLDL   +L     E  QL+ L  LDLS NSL+ LP EIG++  L++L L+ N L T
Sbjct: 49  KVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTT 108

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L         P  +  L +                      RL++ S++L+        +
Sbjct: 109 L---------PKEVGQLEN--------------------LQRLNLNSQKLT-------TL 132

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           P EI +   +  L L  N +  LP E+    +L+V F
Sbjct: 133 PKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLF 169


>gi|418744965|ref|ZP_13301310.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794296|gb|EKR92206.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 465

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/308 (33%), Positives = 157/308 (50%), Gaps = 19/308 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL N  L+ +P E+ K                L++L L  N +  L +++  L  L  L
Sbjct: 135 LNLHNNRLKSLPKEIGK-------------LQKLKRLYLGGNQLRTLPQEIETLQDLEEL 181

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S ++L   P  IG+L  LK L +  N ++ +  EIG   +L +    +NQL  LP+ +
Sbjct: 182 HLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEI 241

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTELIA 191
           G+  NL +   SNN + +LP+++     +  L +  N+   L   +   W +  L +L  
Sbjct: 242 GKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQI---WQLQNLQDLHL 298

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N L  +P+ IG L +L  L L  N++ ++P  I     L    + NN L  LP E+GK
Sbjct: 299 AHNQLTVLPQEIGKLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGK 358

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  LDL +NQL+    +  +L +L  LDLSNN L+ LP EIGK+  L  L L+GNP 
Sbjct: 359 LEKLKYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLEDLDLSGNPF 418

Query: 311 RTLRSSLV 318
            T    +V
Sbjct: 419 TTFPKEIV 426



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 192/405 (47%), Gaps = 43/405 (10%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY++ D A +       +D++ L L  + +  L +++  L  L  LN+ +N+L+ LP 
Sbjct: 24  NKVYRDLDAALKN-----PMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPN 78

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            IG+L  L+ L +  N +  +P E+G+   L + +  +NQL  LP+ +G+  NL      
Sbjct: 79  EIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQVLNLH 138

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG- 204
           NN + SLP+++    K+ +L + GN+L  L    I +   L EL  S++ L   PE IG 
Sbjct: 139 NNRLKSLPKEIGKLQKLKRLYLGGNQLRTLPQE-IETLQDLEELHLSRDQLKTFPEEIGK 197

Query: 205 --SLSRLI--------------------RLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
             SL RLI                    RL L  N++ ++P+ I    +L E  + NN L
Sbjct: 198 LRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQL 257

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
             LP E+G L  L  L L+SNQ +    +  QL+ L  L L++N L+ LP EIGK+  L 
Sbjct: 258 VTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGKLEKLE 317

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N L TL   +        LKYL          + +  +  L+          K 
Sbjct: 318 DLYLEDNQLTTLPKEIWKLEK---LKYL----------DLANNQLRLLPEEIGKLEKLKY 364

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L L    L  +P +I +  ++  LDLS N +  LP E+     L+
Sbjct: 365 LDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLE 409



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 181/410 (44%), Gaps = 72/410 (17%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL N  L  +PNE+              +  +LQ L L +N +  L +++  L  L  
Sbjct: 65  ELNLENNQLATLPNEI-------------GQLENLQVLSLYNNRLRTLPQEVGTLQNLRE 111

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+ +N+L+ LP  IG+L  L+ L++  N +  +P EIG    L +     NQL+ LP  
Sbjct: 112 LNLENNQLATLPNGIGQLENLQVLNLHNNRLKSLPKEIGKLQKLKRLYLGGNQLRTLPQE 171

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN--------------- 177
           +    +L +   S + + + PE++     + +L ++ N+L VLS                
Sbjct: 172 IETLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERLILEN 231

Query: 178 -------NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
                  N I     L EL  S N L  +P+ IG+L  L  L L+ N+  ++P  I    
Sbjct: 232 NQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQ 291

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +L + ++ +N L+ LP E+GKL KL  L L  NQL     E  +L +L  LDL+NN L  
Sbjct: 292 NLQDLHLAHNQLTVLPQEIGKLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRL 351

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP EIGK+  L+ L L+ N LR L   +  G    L                        
Sbjct: 352 LPEEIGKLEKLKYLDLSNNQLRLLPQKI--GKLEKL------------------------ 385

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                     K L L    L+ +P EI +  ++  LDLS N     P E+
Sbjct: 386 ----------KYLDLSNNQLATLPKEIGKLEKLEDLDLSGNPFTTFPKEI 425



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 144/294 (48%), Gaps = 22/294 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+LS   L+  P E+ K                L++LIL  N +  L +++  L  L  
Sbjct: 180 ELHLSRDQLKTFPEEIGK-------------LRSLKRLILDSNQLVVLSQEIGKLRSLER 226

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+L+ LP  IG+L  L+ L++S N ++ +P EIG+   L      SNQ + LP  
Sbjct: 227 LILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQ 286

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTELI 190
           + +  NL D   ++N +T LP+++    K+  L +E N+LT L   +   W +  L  L 
Sbjct: 287 IWQLQNLQDLHLAHNQLTVLPQEIGKLEKLEDLYLEDNQLTTLPKEI---WKLEKLKYLD 343

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            + N L  +PE IG L +L  LDL  N++  +P  I     L    + NN L+ LP E+G
Sbjct: 344 LANNQLRLLPEEIGKLEKLKYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIG 403

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           KL KL  LDL  N    +  E   L+   +    N    +P  + +  T+RKLL
Sbjct: 404 KLEKLEDLDLSGNPFTTFPKEIVGLKHLKILKLKN----IPALLSERETIRKLL 453


>gi|418727710|ref|ZP_13286298.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959068|gb|EKO22845.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 423

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/269 (35%), Positives = 145/269 (53%), Gaps = 2/269 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L  ++R L  L +L++ +N+L+ LP  IG+L  L+ L +S+N +  
Sbjct: 116 NLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       +QL  LP  +G+  NL +   S+N +T LP+++     + + 
Sbjct: 176 LPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRF 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+LT+L    I     L EL    N L  +P+ IG L  L R  L  N+   +P  
Sbjct: 236 VLDNNQLTILPKE-IGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E Y+  N L+  P E+GKL KL TL+L +NQL     E  QL+ L  L+LS 
Sbjct: 295 IGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSE 354

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N L  +P EIG++  L+ L L+ N L TL
Sbjct: 355 NQLKTIPQEIGQLQNLKLLDLSNNQLTTL 383



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 185/391 (47%), Gaps = 22/391 (5%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ LIL+   +  L ++++ L  L +L++ HN+L+ LP  IG+L  L+ L + +N + 
Sbjct: 46  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     ++NQL  LP+ + +  NL      NN +T LP+++     + +
Sbjct: 106 ALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQE 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L   ++ L  +P+ IG L  L  LDL  N++  +P 
Sbjct: 166 LYLSYNQLTTLPKE-IGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L  F + NN L+ LP E+GKL  L  L L  NQL     E  QL+ L    L 
Sbjct: 225 EIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLD 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN  + LP EIG++  L++L L+ N L T    +       L K     L  N+ +    
Sbjct: 285 NNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEI-----GKLQKLQTLNLWNNQLTTLPE 339

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
             E L  + T        L+L    L  IP EI +   +  LDLS N +  LP E+    
Sbjct: 340 EIEQLKNLKT--------LNLSENQLKTIPQEIGQLQNLKLLDLSNNQLTTLPKEIEQLK 391

Query: 404 SLQV------KFSDLVTNK-ESCISGCYLYW 427
           +LQ       +FS     K    +  C +Y+
Sbjct: 392 NLQTLNLWNNQFSSQEKEKIRKLLPKCQIYF 422



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 146/300 (48%), Gaps = 38/300 (12%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           ++  +    L+L N  L  +P E+              +  +LQ+L L++N +  L +++
Sbjct: 134 IRQLKNLQMLDLGNNQLTILPKEI-------------GQLQNLQELYLSYNQLTTLPKEI 180

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L +L++  ++L+ LP  IG+L  L  LD+S N +  +P EIG    L +F   +N
Sbjct: 181 GKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNN 240

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL  LP  +G+  NL +    +N +T LP+++     + +  ++ N+ T+L         
Sbjct: 241 QLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTIL--------- 291

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
                          P+ IG L  L  L L  N++ + P  I     L    + NN L+ 
Sbjct: 292 ---------------PKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTT 336

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+ +L  L TL+L  NQLK    E  QL+ L +LDLSNN L+ LP EI ++  L+ L
Sbjct: 337 LPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKLLDLSNNQLTTLPKEIEQLKNLQTL 396


>gi|45656720|ref|YP_000806.1| hypothetical protein LIC10829 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084297|ref|ZP_15545160.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102948|ref|ZP_15563550.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599956|gb|AAS69443.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367263|gb|EKP22649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433197|gb|EKP77545.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 402

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 177/365 (48%), Gaps = 15/365 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L  LN+S N++  +P  I +L  L+SL +  N +  
Sbjct: 3   NLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTT 62

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       NQL  LP  +G+  NL     S N I ++P+++    K+  L
Sbjct: 63  LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSL 122

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+LT L    I     L  L  S N L  +P+ IG L  L  LDL  NR+ ++P  
Sbjct: 123 GLDNNQLTTLPQE-IGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE 181

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  LDL +
Sbjct: 182 IGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRS 241

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+  P EIG++  L+ L L  N L TL         P  +  L++    + DS   TT
Sbjct: 242 NQLTIFPKEIGQLKNLQVLDLGSNQLTTL---------PEGIGQLKNLQTLDLDSNQLTT 292

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I     L +    L L    L  +P EI +   +  L L  N +  LP E+    +
Sbjct: 293 LPQEIKQLKNLQL----LDLSYNQLKTLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQN 348

Query: 405 LQVKF 409
           L+V F
Sbjct: 349 LKVLF 353



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 177/395 (44%), Gaps = 51/395 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLS   ++ +P E+ K                LQ L L +N +  L +++  L  L  
Sbjct: 29  KLNLSANQIKTIPKEIEK-------------LQKLQSLYLPNNQLTTLPQEIGQLQKLQW 75

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  IG+L  LKSL++S+N I  IP EI     L      +NQL  LP  
Sbjct: 76  LYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE 135

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     S N +T+LP+++     +  LD+  N+LT L    I     L EL   
Sbjct: 136 IGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGHLQNLQELYLV 194

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L  L  L+L  NR+ ++   I    +L    + +N L+  P E+G+L
Sbjct: 195 SNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQL 254

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  LDL SNQL        QL+ L  LDL +N L+ LP EI ++  L+ L L+ N L+
Sbjct: 255 KNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLK 314

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL   +                            E L  + T        L L    L+ 
Sbjct: 315 TLPKEI----------------------------EQLKNLQT--------LYLGYNQLTV 338

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +P EI +   +  L L+ N +  LP E+    +LQ
Sbjct: 339 LPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQ 373



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 105/299 (35%), Positives = 152/299 (50%), Gaps = 15/299 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNLS   ++ +P E+ K                LQ L L +N +  L +++  L  L  
Sbjct: 98  SLNLSYNQIKTIPKEIEK-------------LQKLQSLGLDNNQLTTLPQEIGQLQNLQS 144

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S N+L+ LP  IG+L  L+SLD+S N +  +P EIG    L +    SNQL  LP+ 
Sbjct: 145 LDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNE 204

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL      NN +T+L +++     +  LD+  N+LT+     I     L  L   
Sbjct: 205 IGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKE-IGQLKNLQVLDLG 263

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +PE IG L  L  LDL  N++ ++P  I    +L    +  N L  LP E+ +L
Sbjct: 264 SNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQL 323

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L TL L  NQL     E  QL+ L VL L+NN L+ LP EIG++  L++L L  N L
Sbjct: 324 KNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQL 382



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 14/231 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+LS   L  +P E+                 +LQ+L L  N +  L  ++  L  L  
Sbjct: 167 SLDLSTNRLTTLPQEI-------------GHLQNLQELYLVSNQLTILPNEIGQLKNLQT 213

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+ +N+L+ L   I +L  LKSLD+  N +   P EIG    L   D  SNQL  LP  
Sbjct: 214 LNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEG 273

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL      +N +T+LP+++     +  LD+  N+L  L    I     L  L   
Sbjct: 274 IGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKE-IEQLKNLQTLYLG 332

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
            N L  +P+ IG L  L  L L+ N++ ++P  I    +L E Y+ NN LS
Sbjct: 333 YNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLS 383



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 68/129 (52%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L E +  L  L  L++  N+L+ LP  I +L  L+ LD+S+N +  
Sbjct: 256 NLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKT 315

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EI     L       NQL  LP  +G+  NL     +NN +T+LP+++     + +L
Sbjct: 316 LPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQEL 375

Query: 166 DVEGNKLTV 174
            +  N+L++
Sbjct: 376 YLNNNQLSI 384



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 16/212 (7%)

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           +  L  L+L++N++  +P  I    +L +  +  N +  +P E+ KL KL +L L +NQL
Sbjct: 1   MKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQL 60

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                E  QL +L  L L  N L+ LP EIG++  L+ L L+ N ++T+         P 
Sbjct: 61  TTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTI---------PK 111

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
            ++ L+       D+   TT    I     L    + L L    L+ +P EI +   +  
Sbjct: 112 EIEKLQKLQSLGLDNNQLTTLPQEIGQLQNL----QSLDLSTNRLTTLPQEIGQLQNLQS 167

Query: 385 LDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           LDLS N +  LP E+    +LQ  +  LV+N+
Sbjct: 168 LDLSTNRLTTLPQEIGHLQNLQELY--LVSNQ 197


>gi|428306331|ref|YP_007143156.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
 gi|428247866|gb|AFZ13646.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
          Length = 1011

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 184/355 (51%), Gaps = 45/355 (12%)

Query: 14  LNLSNRSLRDVPNEVYK----------NFDEAGE--GDKWWEAVDLQKLILAHNNIEKLK 61
           L+LS + L ++P E+ K             EA E  GD++ E V       + NN++ L 
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLILGKKIEAYEFVGDRYLEKV-------SGNNLKTLP 73

Query: 62  EDLRNLPLLTVLNVSHN-----------------------KLSELPAAIGELHMLKSLDV 98
            +L  LP L  L++S N                       KL+E+P AI +L  L  LD+
Sbjct: 74  LELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIAKLTNLTQLDL 133

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N I +IP+ I   T L +    +NQ+ ++P ++ +  NL+ F  SNN IT +PE +A+
Sbjct: 134 SNNQITQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNNQITQIPEAIAN 193

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
            + +++L +  N++T +    IA+ T LT+L    N +  +PE I +L  L +LDL  N+
Sbjct: 194 LTNLTQLILSNNQITQIP-EAIANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLNNK 252

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           I  IP +I+   +L +  + +N ++ +P  + KL+ L  LDLHSN++ +      +L  L
Sbjct: 253 ITQIPEAIAKLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHSNKITQIPEAIAKLTNL 312

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP-TPALLKYLRS 331
           + LDL +N ++ +P  I K+T L +L L+ N +  +   ++N      +L YLR 
Sbjct: 313 TQLDLRSNKITQIPEAIAKLTNLTQLDLSDNSITNIPLEMLNSKDAKEILNYLRQ 367



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 171/359 (47%), Gaps = 57/359 (15%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSL------------------DVSFNSIMKIPDEIGSAT 114
           L++S  +L+ELP  IG+L  L+SL                   VS N++  +P E+    
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLILGKKIEAYEFVGDRYLEKVSGNNLKTLPLELLGLP 80

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L K D S N L+ +P  + + L+L +       +T +P+ +A  + +++LD+  N++T 
Sbjct: 81  NLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIAKLTNLTQLDLSNNQITQ 140

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           +    IA  T LT+L+   N +  +PE I  L+ L +  L  N+I  IP +I+   +L +
Sbjct: 141 IPE-AIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNNQITQIPEAIANLTNLTQ 199

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
             + NN ++ +P  +  L+ L  LDL +N++ +       L  L+ LDL NN ++ +P  
Sbjct: 200 LILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLNNKITQIPEA 259

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           I K+T L +L+L+ N +                    +++PE             I   T
Sbjct: 260 IAKLTNLTQLILSDNKI--------------------TQIPE------------AIAKLT 287

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL-QVKFSD 411
            L+    +L L    ++ IP  I +   +T+LDL  N I ++P  ++   +L Q+  SD
Sbjct: 288 NLT----QLDLHSNKITQIPEAIAKLTNLTQLDLRSNKITQIPEAIAKLTNLTQLDLSD 342



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 42/190 (22%)

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 293
           E  +    L+ LP E+GKL +L +L L   +++ Y     +    V   S N+L  LP E
Sbjct: 20  ELDLSGQELTELPGEIGKLQQLESLIL-GKKIEAYEFVGDRYLEKV---SGNNLKTLPLE 75

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           +  +  LRKL ++GNPL ++                                 D++T   
Sbjct: 76  LLGLPNLRKLDISGNPLESI--------------------------------PDVVTQIL 103

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ--VKFSD 411
            L    +EL L  + L+ IP  I +   +T+LDLS N I ++P  ++   +L   V F++
Sbjct: 104 HL----EELILIRVKLTEIPDAIAKLTNLTQLDLSNNQITQIPEAIAKLTNLTQLVLFNN 159

Query: 412 LVTNKESCIS 421
            +T     I+
Sbjct: 160 QITQIPEAIA 169


>gi|418744885|ref|ZP_13301230.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794216|gb|EKR92126.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 367

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 154/288 (53%), Gaps = 25/288 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L  N +  L +++ NL  L  L++  NK++ LP  IG+L  L+ L++SFN +  
Sbjct: 61  NLKELNLWENKLTTLPQEIGNLQHLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLAT 120

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L +     NQ   LP  +G+  NL +   + N +T+LP+++ +   + +L
Sbjct: 121 LPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQEL 180

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L    I     L +L+ ++N L  +P  IG+L  L  L+L +N++ ++P  
Sbjct: 181 YLNENQLTALPKE-IGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTLPKE 239

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ-------------LKEYCVEA 272
           I    +L   ++GNN L+ALP E+  L KL  L L+ NQ             LKE  + +
Sbjct: 240 IGKLQNLQGLHLGNNKLTALPIEIENLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSS 299

Query: 273 CQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            QL           +L  LDL NN L+ LP EIGK+  L+ L L GNP
Sbjct: 300 NQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGKLQNLQDLYLGGNP 347



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 165/350 (47%), Gaps = 42/350 (12%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + VL+++  KL  LP  IG+L  LK L++  N +  +P EIG+   L K 
Sbjct: 29  LNEALQNPTQVRVLHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQKL 88

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D   N++  LP  +G+  +L +   S N + +LP+++ +   + +L +  N+ T L    
Sbjct: 89  DLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTAL---- 144

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
                               PE IG L  L  L L++N++ ++P  I    +L E Y+  
Sbjct: 145 --------------------PEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNE 184

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L+ALP E+GKL  L  L L+ NQL    +E   L+ L  L+L  N L+ LP EIGK+ 
Sbjct: 185 NQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTLPKEIGKLQ 244

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L+ L L  N L  L   + N      LK+L               K  L T+   +   
Sbjct: 245 NLQGLHLGNNKLTALPIEIENLQK---LKWL------------GLNKNQLTTIPKEIGNL 289

Query: 359 S--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              KEL+L    L+ IP EI    ++  LDL  N +  LP E+    +LQ
Sbjct: 290 QNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGKLQNLQ 339


>gi|417781236|ref|ZP_12428988.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778487|gb|EKR63113.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 400

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 186/385 (48%), Gaps = 45/385 (11%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
            Y N  EA        A D++ L L HNN E L +++  L  LT L +S+N+L  LP  I
Sbjct: 30  TYHNLTEA-----LRNATDVRILSL-HNN-ETLPKEIGELQNLTKLYLSNNQLQALPKEI 82

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G+L  L+ L ++ N +  IP+EIG    L      +NQL+ LP  +G+   L     ++N
Sbjct: 83  GKLKKLQVLTLNNNQLTTIPNEIGELKKLQVLYLDNNQLQALPKEIGKLKKLQVLYLNDN 142

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + +LP+++    K+ +LD   N LT L    I     L ELI S N L  +P+ IG L 
Sbjct: 143 QLKTLPKEIEYLQKLRELDSTNNPLTTLPKE-IGYLKNLEELILSNNELTTLPKEIGKLK 201

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L L  + + ++P+ I    +L + Y+    L+ LP ++G L  L  L L  NQLK 
Sbjct: 202 NLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPNDIGYLKNLQELYLSDNQLKT 261

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              +  +L+ L VL LS N L+ LP E GK+ +LR+L L+GN L TL         P   
Sbjct: 262 LPNDIGKLKNLQVLHLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTL---------PKEF 312

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
             L+S                            +EL+L G  L+ +P EI +   + +L+
Sbjct: 313 GKLQSL---------------------------RELNLSGNQLTTLPKEIGKLQSLRELN 345

Query: 387 LSRNSIQELPPELSSCASLQVKFSD 411
           LS N +  LP E+    +LQ  + D
Sbjct: 346 LSGNQLTTLPKEIGHLKNLQELYLD 370


>gi|418719292|ref|ZP_13278492.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410744445|gb|EKQ93186.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 399

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 188/385 (48%), Gaps = 46/385 (11%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
            Y N  EA          D++ L L HNN E L +++  L  LT L +S N+L  LP  I
Sbjct: 30  TYHNLTEA-----LQNPTDVRILSL-HNN-ETLPKEIGELQNLTELYLSSNQLKTLPKEI 82

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G+L  ++ L +S N +  +P +IG    L + D ++N L  LP  +G+  NL +    NN
Sbjct: 83  GKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNN 142

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + +LP+D+     + +L ++GN+L  L  + I     LTEL  + N L  +P+ IG+L 
Sbjct: 143 QLKTLPKDIGQLQNLRELYLDGNQLKTLPKD-IGKLQNLTELNLTNNPLTTLPKDIGNLK 201

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L L  N + ++P  I    +L   Y+G   L+ LP ++G L  L  L+L  NQ+  
Sbjct: 202 NLGELLLINNELTTLPKEIGKLKNLQVLYLG-ALLTTLPNDIGYLKSLRELNLSGNQITT 260

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              +  QL+ L VL LS N L+ LP EIG++  LR+L L+GN + TL         P  +
Sbjct: 261 LPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTL---------PKEI 311

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
             L+S                            +EL+L G  ++ +P EI +   + +L+
Sbjct: 312 GELQSL---------------------------RELNLSGNQITTLPKEIGKLQSLRELN 344

Query: 387 LSRNSIQELPPELSSCASLQVKFSD 411
           L  N I  +P E+    +LQV + D
Sbjct: 345 LGGNQITTIPKEIGHLKNLQVLYLD 369



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 159/301 (52%), Gaps = 16/301 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LS+  L+ +P E+ K                +++L L++N +  L +D+  L  L  L
Sbjct: 68  LYLSSNQLKTLPKEIGK-------------LQKIERLSLSNNQLTTLPKDIGKLKKLREL 114

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N L+ LP  IG+L  L+ L +  N +  +P +IG    L +     NQLK LP  +
Sbjct: 115 DLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDI 174

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL++   +NN +T+LP+D+ +   + +L +  N+LT L    I     L  L    
Sbjct: 175 GKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKE-IGKLKNLQVLYLGA 233

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            LL  +P  IG L  L  L+L  N+I ++P  I    +L   Y+  N L+ LP E+G+L 
Sbjct: 234 -LLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQ 292

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  LDL  NQ+     E  +L+ L  L+LS N ++ LP EIGK+ +LR+L L GN + T
Sbjct: 293 NLRELDLSGNQITTLPKEIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITT 352

Query: 313 L 313
           +
Sbjct: 353 I 353



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 118/247 (47%), Gaps = 15/247 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L N  L+ +P ++              +  +L++L L  N ++ L +D+  L  LT L
Sbjct: 137 LYLYNNQLKTLPKDI-------------GQLQNLRELYLDGNQLKTLPKDIGKLQNLTEL 183

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+++N L+ LP  IG L  L  L +  N +  +P EIG    L      +  L  LP+ +
Sbjct: 184 NLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGA-LLTTLPNDI 242

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L +   S N IT+LP+D+     +  L +  N+L  L    I     L EL  S 
Sbjct: 243 GYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKE-IGQLQNLRELDLSG 301

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +P+ IG L  L  L+L  N+I ++P  I    SL E  +G N ++ +P E+G L 
Sbjct: 302 NQITTLPKEIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGNQITTIPKEIGHLK 361

Query: 254 KLGTLDL 260
            L  L L
Sbjct: 362 NLQVLYL 368


>gi|418728103|ref|ZP_13286683.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777148|gb|EKR57116.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 447

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 194/403 (48%), Gaps = 23/403 (5%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L + +  L  L +L++S N+L  LP  I +L  L+ LD+S N ++
Sbjct: 47  LDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLI 106

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EI     L   D  SNQL  LP  +G+  NL +   SNN +T+ P+++    K+  
Sbjct: 107 ILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQW 166

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N++  +    I     L  L    N L  +P+ IG L +L  L+L  N+I ++P 
Sbjct: 167 LNLSANQIKTIPKE-IEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQ 225

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I     L   Y+  N L+ LP E+ KL KL +L L +NQL     E  QL+ L VL L+
Sbjct: 226 EIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLN 285

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPE----- 335
           NN L+ +P EIG +  L+ L L  N L T+   +       +L    ++   LP+     
Sbjct: 286 NNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKL 345

Query: 336 NEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
               E   +   L T+   +      +EL L    L+ IP EI +   + +L LS N + 
Sbjct: 346 QNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLI 405

Query: 394 ELPPELSSCASLQV------KFSDLVTNKESC---ISGCYLYW 427
            +P E+    +LQ       +FS  +  KE     +  C +Y+
Sbjct: 406 TIPKEIGQLQNLQTLYLRNNQFS--IEEKERIRKLLPKCQIYF 446



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 15/297 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LSN  L   P E+       G+  K      LQ L L+ N I+ + +++  L  L  
Sbjct: 143 ELYLSNNQLTTFPKEI-------GKLQK------LQWLNLSANQIKTIPKEIEKLQKLQS 189

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+L+ LP  IG+L  L+ L++S+N I  +P EI     L       NQL  LP  
Sbjct: 190 LYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQE 249

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +   L      NN +T+LP+++     +  L +  N+LT +    I     L +L   
Sbjct: 250 IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE-IGHLQNLQDLYLV 308

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  LDL  N++  +P  I    +L E Y+ NN L+ +P E+G+L
Sbjct: 309 SNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQL 368

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
             L  L L +NQL     E  QL+ L  L LSNN L  +P EIG++  L+ L L  N
Sbjct: 369 QNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 425



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 128/253 (50%), Gaps = 14/253 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N  L  +P E+       G+  K      LQ L L++N I+ L +++  L  L  
Sbjct: 189 SLYLPNNQLTTLPQEI-------GKLQK------LQWLNLSYNQIKTLPQEIEKLQKLQW 235

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  I +L  L+SL +  N +  +P EIG    L     ++NQL  +P  
Sbjct: 236 LYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE 295

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL D    +N +T++P+++     +  LD+  N+LT+L    I     L EL  S
Sbjct: 296 IGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKE-IGKLQNLQELYLS 354

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++ +IP  I    +L E Y+ NN L  +P E+G+L
Sbjct: 355 NNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQL 414

Query: 253 SKLGTLDLHSNQL 265
             L TL L +NQ 
Sbjct: 415 QNLQTLYLRNNQF 427



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 109/230 (47%), Gaps = 14/230 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   ++ +P E+ K                LQ L L  N +  L +++  L  L  L
Sbjct: 213 LNLSYNQIKTLPQEIEK-------------LQKLQWLYLHKNQLTTLPQEIEKLQKLESL 259

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + +N+L+ LP  IG+L  LK L ++ N +  IP EIG    L      SNQL  +P  +
Sbjct: 260 GLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEI 319

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL      NN +T LP+++     + +L +  N+LT +    I     L EL  S 
Sbjct: 320 GQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKE-IGQLQNLQELYLSN 378

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
           N L  +P+ IG L  L  L L  N++++IP  I    +L   Y+ NN  S
Sbjct: 379 NQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFS 428



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 13/161 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+N  L  +P E+                 +LQ L L  N +  + +++  L  L +L
Sbjct: 282 LFLNNNQLTTIPQEI-------------GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQML 328

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  L+ L +S N +  IP EIG    L +   S+NQL  +P  +
Sbjct: 329 DLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEI 388

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           G+  NL +   SNN + ++P+++     +  L +  N+ ++
Sbjct: 389 GQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSI 429


>gi|421118972|ref|ZP_15579299.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348312|gb|EKO99138.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 448

 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 202/426 (47%), Gaps = 30/426 (7%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           +V  + Y +  EA +       +D++ LIL+   ++ L + +  L  L +L++S N+L  
Sbjct: 31  EVEPKTYMDLTEAFQN-----PLDVRVLILSEQKLKALPKKIGQLKNLQMLDLSDNQLII 85

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  I +L  L+ LD+  N ++ +P EI     L   D  SNQL  LP  +G+  NL + 
Sbjct: 86  LPKEIRQLKNLQMLDLHSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQEL 145

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN +T+ P+++    K+  L++  N++  +    I     L  L    N L  +P+ 
Sbjct: 146 YLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKE-IEKLQKLQSLYLPNNQLTTLPQE 204

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L +L  L+L  N+I ++P  I     L   Y+  N L+ LP E+ KL KL +L L +
Sbjct: 205 IGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDN 264

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL     E  QL+ L VL L+NN L+ +P EIG +  L+ L L  N L T+   +    
Sbjct: 265 NQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQ 324

Query: 322 TPALLKYLRSRLP---------ENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLS 370
              +L    ++L          +N  +    +   L T+   +      +EL L    L+
Sbjct: 325 NLQMLDLGNNQLTILPKEIGKLQNLQT-LYLSNNQLTTIPKEIGQLQNLQELYLSNNQLT 383

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV------KFSDLVTNKESC---IS 421
            IP EI +   + +L LS N +  +P E+    +LQ       +FS  +  KE     + 
Sbjct: 384 TIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFS--IEEKERIRKLLP 441

Query: 422 GCYLYW 427
            C +Y+
Sbjct: 442 KCQIYF 447



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 15/297 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LSN  L   P E+       G+  K      LQ L L+ N I+ + +++  L  L  
Sbjct: 144 ELYLSNNQLTTFPKEI-------GKLQK------LQWLNLSANQIKTIPKEIEKLQKLQS 190

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+L+ LP  IG+L  L+ L++S+N I  +P EI     L       NQL  LP  
Sbjct: 191 LYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQE 250

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +   L      NN +T+LP+++     +  L +  N+LT +    I     L +L   
Sbjct: 251 IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE-IGHLQNLQDLYLV 309

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  LDL  N++  +P  I    +L   Y+ NN L+ +P E+G+L
Sbjct: 310 SNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQTLYLSNNQLTTIPKEIGQL 369

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
             L  L L +NQL     E  QL+ L  L LSNN L  +P EIG++  L+ L L  N
Sbjct: 370 QNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 426



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 127/253 (50%), Gaps = 14/253 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N  L  +P E+       G+  K      LQ L L++N I+ L +++  L  L  
Sbjct: 190 SLYLPNNQLTTLPQEI-------GKLQK------LQWLNLSYNQIKTLPQEIEKLQKLQW 236

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  I +L  L+SL +  N +  +P EIG    L     ++NQL  +P  
Sbjct: 237 LYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE 296

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL D    +N +T++P+++     +  LD+  N+LT+L    I     L  L  S
Sbjct: 297 IGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKE-IGKLQNLQTLYLS 355

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++ +IP  I    +L E Y+ NN L  +P E+G+L
Sbjct: 356 NNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQL 415

Query: 253 SKLGTLDLHSNQL 265
             L TL L +NQ 
Sbjct: 416 QNLQTLYLRNNQF 428



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 139/292 (47%), Gaps = 20/292 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   ++ +P E+ K                LQ L L +N +  L +++  L  L  L
Sbjct: 168 LNLSANQIKTIPKEIEK-------------LQKLQSLYLPNNQLTTLPQEIGKLQKLQWL 214

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S+N++  LP  I +L  L+ L +  N +  +P EI     L      +NQL  LP  +
Sbjct: 215 NLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEI 274

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     +NN +T++P+++     +  L +  N+LT +    I     L  L    
Sbjct: 275 GQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKE-IGQLQNLQMLDLGN 333

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG L  L  L L  N++ +IP  I    +L E Y+ NN L+ +P E+G+L 
Sbjct: 334 NQLTILPKEIGKLQNLQTLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 393

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
            L  L L +NQL     E  QL+ L  L L NN  S     I +   +RKLL
Sbjct: 394 NLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFS-----IEEKERIRKLL 440


>gi|440802335|gb|ELR23264.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 845

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 192/403 (47%), Gaps = 42/403 (10%)

Query: 46  DLQKLI--LAHNNI-EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           DL  L+  +AH N+ E L   +  L  LTVL++S N L +LP  +G+LH LKSLD+  N 
Sbjct: 101 DLSALVRLIAHCNLLEDLPPGVGELANLTVLDLSTNNLKQLPPEVGKLHALKSLDIDNNR 160

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGR-----CLNLS----------------- 140
           +  +P E G   +L +  C++N     P S+ R      LN+S                 
Sbjct: 161 LKTLPPEFGDLGSLTQLTCANNLFSHFPESICRLGFLKTLNISCNRITQLPDAIAQLGDS 220

Query: 141 --DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
             +   S N   + PE LA C  +  LD   N L  L++N I+    L  L  S N L  
Sbjct: 221 ITELDLSGNRFVTFPESLAGCRSLITLDFRDNNLCDLADN-ISQLCELATLNLSHNKLTT 279

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P  IG ++ L+ L+L +N+I  +P  +     L + Y+  NAL+ LP EL  ++ +  L
Sbjct: 280 LPRQIGEMTVLMELNLSKNKIAHLPPELGHLSFLGKLYLSRNALATLPIELSNIAFIQEL 339

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           DL +N L +  +E  +L +L  L L  N+L+ LPPE+G +  L+ L ++ N L TL + +
Sbjct: 340 DLSNNGLDDLPIEIFKLDKLQTLKLDCNNLTHLPPELGHLFRLQHLYVSNNQLTTLPAEI 399

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS-------------KELSL 364
                  +L   ++ + +  D   +    + I +   L   S             ++L L
Sbjct: 400 SQLSRLQVLSIYQNAIKQLPDGMGALKHIESICLGDNLLDESGLAALEKATMPALEQLVL 459

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            G  L++IP  +     + +L LSRN I ELP  ++    +++
Sbjct: 460 SGNRLTSIPEGLCNLASLKELYLSRNEIAELPEAITRLNKIRI 502



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 194/412 (47%), Gaps = 35/412 (8%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M+  +  AR + +L+L    LR +P  ++             +  +L  L ++ N++  L
Sbjct: 1   MEAKIATARQTFALDLQGFKLRALPKGLF-------------DLKELSALNVSSNDLTAL 47

Query: 61  KEDL-RNLPLLTVLNVSHNKLSELPA-AIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
           ++++ R LP LT L ++ NKL+ LP+   G L  L+ LDV  N +  +P  +G  +ALV+
Sbjct: 48  EDEVVRLLPALTSLRINGNKLTGLPSLGSGALKELEVLDVGKNRLRSLPGSVGDLSALVR 107

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
                N L++LP  +G   NL+    S N +  LP ++     +  LD++ N+L  L   
Sbjct: 108 LIAHCNLLEDLPPGVGELANLTVLDLSTNNLKQLPPEVGKLHALKSLDIDNNRLKTLPPE 167

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC-SLAEFYM 237
                  LT+L  + NL +  PE+I  L  L  L++  NRI  +P +I+    S+ E  +
Sbjct: 168 F-GDLGSLTQLTCANNLFSHFPESICRLGFLKTLNISCNRITQLPDAIAQLGDSITELDL 226

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 296
             N     P  L     L TLD   N L +      QL  L+ L+LS+N L+ LP +IG+
Sbjct: 227 SGNRFVTFPESLAGCRSLITLDFRDNNLCDLADNISQLCELATLNLSHNKLTTLPRQIGE 286

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           MT L +L L+ N +  L   L  G    L K   SR               L T+   LS
Sbjct: 287 MTVLMELNLSKNKIAHLPPEL--GHLSFLGKLYLSR-------------NALATLPIELS 331

Query: 357 VTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             +  +EL L    L  +P EI++  ++  L L  N++  LPPEL     LQ
Sbjct: 332 NIAFIQELDLSNNGLDDLPIEIFKLDKLQTLKLDCNNLTHLPPELGHLFRLQ 383



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 148/323 (45%), Gaps = 33/323 (10%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           D+    +  F E+  G +    +D +      NN+  L +++  L  L  LN+SHNKL+ 
Sbjct: 225 DLSGNRFVTFPESLAGCRSLITLDFRD-----NNLCDLADNISQLCELATLNLSHNKLTT 279

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IGE+ +L  L++S N I  +P E+G  + L K   S N L  LP  L     + + 
Sbjct: 280 LPRQIGEMTVLMELNLSKNKIAHLPPELGHLSFLGKLYLSRNALATLPIELSNIAFIQEL 339

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             SNN +  LP ++    K+  L ++ N LT L   L      L  L  S N L  +P  
Sbjct: 340 DLSNNGLDDLPIEIFKLDKLQTLKLDCNNLTHLPPEL-GHLFRLQHLYVSNNQLTTLPAE 398

Query: 203 IGSLSRLIRLDLHQNRILSIPSS------ISGCC--------------------SLAEFY 236
           I  LSRL  L ++QN I  +P        I   C                    +L +  
Sbjct: 399 ISQLSRLQVLSIYQNAIKQLPDGMGALKHIESICLGDNLLDESGLAALEKATMPALEQLV 458

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           +  N L+++P  L  L+ L  L L  N++ E      +L ++ + DLS+N+++ LP  I 
Sbjct: 459 LSGNRLTSIPEGLCNLASLKELYLSRNEIAELPEAITRLNKIRIFDLSDNAIAALPSFIS 518

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            + +LR++ L+ N L +L    V
Sbjct: 519 SLHSLREINLSYNRLSSLPPEFV 541



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 144/314 (45%), Gaps = 26/314 (8%)

Query: 12  GSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLT 71
            +LNLS+  L  +P ++              E   L +L L+ N I  L  +L +L  L 
Sbjct: 268 ATLNLSHNKLTTLPRQI-------------GEMTVLMELNLSKNKIAHLPPELGHLSFLG 314

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL--VKFDCSSNQLKEL 129
            L +S N L+ LP  +  +  ++ LD+S N +  +P EI     L  +K DC  N L  L
Sbjct: 315 KLYLSRNALATLPIELSNIAFIQELDLSNNGLDDLPIEIFKLDKLQTLKLDC--NNLTHL 372

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-----IASWT 184
           P  LG    L     SNN +T+LP +++  S++  L +  N +  L + +     I S  
Sbjct: 373 PPELGHLFRLQHLYVSNNQLTTLPAEISQLSRLQVLSIYQNAIKQLPDGMGALKHIESIC 432

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +   L+    L      T+ +L +L+   L  NR+ SIP  +    SL E Y+  N ++ 
Sbjct: 433 LGDNLLDESGLAALEKATMPALEQLV---LSGNRLTSIPEGLCNLASLKELYLSRNEIAE 489

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP  + +L+K+   DL  N +         L  L  ++LS N LS LPPE  K+T L  L
Sbjct: 490 LPEAITRLNKIRIFDLSDNAIAALPSFISSLHSLREINLSYNRLSSLPPEFVKLTNLCVL 549

Query: 304 LLTGNPLRTLRSSL 317
            L  N L  L   L
Sbjct: 550 YLMHNNLTDLPEDL 563



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 58/115 (50%)

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           +P L  L +S N+L+ +P  +  L  LK L +S N I ++P+ I     +  FD S N +
Sbjct: 451 MPALEQLVLSGNRLTSIPEGLCNLASLKELYLSRNEIAELPEAITRLNKIRIFDLSDNAI 510

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
             LPS +    +L +   S N ++SLP +    + +  L +  N LT L  +L A
Sbjct: 511 AALPSFISSLHSLREINLSYNRLSSLPPEFVKLTNLCVLYLMHNNLTDLPEDLQA 565


>gi|255087408|ref|XP_002505627.1| predicted protein [Micromonas sp. RCC299]
 gi|226520897|gb|ACO66885.1| predicted protein [Micromonas sp. RCC299]
          Length = 573

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 183/369 (49%), Gaps = 54/369 (14%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           +L  L  L  L++  N+L+ LPA IG+L  L+ L +  N +  +P EIG  TAL +   +
Sbjct: 23  ELGRLSALRKLSLHGNELTSLPAEIGQLTSLEGLRLFGNQLTSVPAEIGQLTALRELSLA 82

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  +P+ +G+  +L +   ++N +T++P ++   + +  L + GN+LT         
Sbjct: 83  ANRLMSVPAEIGQLTSLRELNLNSNQLTNVPAEIGQLTSLEGLRLYGNRLT--------- 133

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                           +PE IG L+ L+ L L  N+  S+P+ I    +L E  +  N L
Sbjct: 134 ---------------SVPEEIGQLTSLVVLVLGGNQFTSVPAEIGQLTALRELRLDGNRL 178

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +++PAE+G+L+ LG L L  NQL     E  QL  L  L+L  N L+ LP EIG++T+L 
Sbjct: 179 TSVPAEIGQLTSLGELSLSGNQLTSVPAEIGQLTLLKGLELYYNQLTSLPAEIGQLTSLE 238

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRS---RLPENEDSEASTTKE-------DLITM 351
            LLL  N L ++         PA ++ LR+   R+  ++      T E       DL+  
Sbjct: 239 HLLLDNNQLTSV---------PAEIRELRAAGCRVDLDDGHWEGVTMENGRVVKLDLVEF 289

Query: 352 A---------TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                      RLS   + L L G NL+++P+EI +   +    LS N +  +P E+   
Sbjct: 290 GLIGALPAEVGRLSAL-RWLQLGGNNLTSVPAEIGQLTSLMTFGLSDNKLTSVPAEIGQL 348

Query: 403 ASLQVKFSD 411
            SL+V + D
Sbjct: 349 TSLEVLYLD 357



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 200/415 (48%), Gaps = 48/415 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL++  L +VP E+              +   L+ L L  N +  + E++  L  L VL
Sbjct: 102 LNLNSNQLTNVPAEI-------------GQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVL 148

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+ + +PA IG+L  L+ L +  N +  +P EIG  T+L +   S NQL  +P+ +
Sbjct: 149 VLGGNQFTSVPAEIGQLTALRELRLDGNRLTSVPAEIGQLTSLGELSLSGNQLTSVPAEI 208

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI------------- 180
           G+   L   +   N +TSLP ++   + +  L ++ N+LT +   +              
Sbjct: 209 GQLTLLKGLELYYNQLTSLPAEIGQLTSLEHLLLDNNQLTSVPAEIRELRAAGCRVDLDD 268

Query: 181 ASWTMLTEL--------IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
             W  +T          +    L+  +P  +G LS L  L L  N + S+P+ I    SL
Sbjct: 269 GHWEGVTMENGRVVKLDLVEFGLIGALPAEVGRLSALRWLQLGGNNLTSVPAEIGQLTSL 328

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
             F + +N L+++PAE+G+L+ L  L L  N+L     E  +L  L+ L LS+N L+ +P
Sbjct: 329 MTFGLSDNKLTSVPAEIGQLTSLEVLYLDHNRLASMPAEIGRLTSLTTLFLSSNRLTSVP 388

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
            EIG++T+L+ L L+ N L ++         PA ++ LR+     ED + +      I  
Sbjct: 389 AEIGQLTSLKGLHLSRNQLTSV---------PAAIRDLRAAGCRLEDCDLTGLLPAEIGC 439

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              L +    L L G  L+++P+EI +   +  L+LSRN +  +P E+    SL+
Sbjct: 440 LGALRL----LQLAGNELTSVPAEIGQLTSLEVLELSRNKLTSVPVEIGQLTSLE 490



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 187/383 (48%), Gaps = 37/383 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L  N +  L  ++  L  L  L +  N+L+ +PA IG+L  L+ L ++ N +M +
Sbjct: 30  LRKLSLHGNELTSLPAEIGQLTSLEGLRLFGNQLTSVPAEIGQLTALRELSLAANRLMSV 89

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+L + + +SNQL  +P+ +G+  +L   +   N +TS+PE++   + +  L 
Sbjct: 90  PAEIGQLTSLRELNLNSNQLTNVPAEIGQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVLV 149

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+ T +    I   T L EL    N L  +P  IG L+ L  L L  N++ S+P+ I
Sbjct: 150 LGGNQFTSVPAE-IGQLTALRELRLDGNRLTSVPAEIGQLTSLGELSLSGNQLTSVPAEI 208

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL-------KEYCVEACQL---- 275
                L    +  N L++LPAE+G+L+ L  L L +NQL       +E     C++    
Sbjct: 209 GQLTLLKGLELYYNQLTSLPAEIGQLTSLEHLLLDNNQLTSVPAEIRELRAAGCRVDLDD 268

Query: 276 -----------RLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
                      R+  LDL    L G LP E+G+++ LR L L GN L ++         P
Sbjct: 269 GHWEGVTMENGRVVKLDLVEFGLIGALPAEVGRLSALRWLQLGGNNLTSV---------P 319

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
           A +  L S +         T+    I   T L V    L L+   L+++P+EI     +T
Sbjct: 320 AEIGQLTSLMTFGLSDNKLTSVPAEIGQLTSLEV----LYLDHNRLASMPAEIGRLTSLT 375

Query: 384 KLDLSRNSIQELPPELSSCASLQ 406
            L LS N +  +P E+    SL+
Sbjct: 376 TLFLSSNRLTSVPAEIGQLTSLK 398



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 188/391 (48%), Gaps = 42/391 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N +  +  ++  L  L  L++S N+L+ +PA IG+L +LK L++ +N +  +
Sbjct: 168 LRELRLDGNRLTSVPAEIGQLTSLGELSLSGNQLTSVPAEIGQLTLLKGLELYYNQLTSL 227

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSL------------------------GRC--LNLS 140
           P EIG  T+L      +NQL  +P+ +                        GR   L+L 
Sbjct: 228 PAEIGQLTSLEHLLLDNNQLTSVPAEIRELRAAGCRVDLDDGHWEGVTMENGRVVKLDLV 287

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
           +F      I +LP ++   S +  L + GN LT +    I   T L     S N L  +P
Sbjct: 288 EF----GLIGALPAEVGRLSALRWLQLGGNNLTSVPAE-IGQLTSLMTFGLSDNKLTSVP 342

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             IG L+ L  L L  NR+ S+P+ I    SL   ++ +N L+++PAE+G+L+ L  L L
Sbjct: 343 AEIGQLTSLEVLYLDHNRLASMPAEIGRLTSLTTLFLSSNRLTSVPAEIGQLTSLKGLHL 402

Query: 261 HSNQLKEYCVEACQLRLSVLDLSNNSLSGL-PPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             NQL         LR +   L +  L+GL P EIG +  LR L L GN L ++ + +  
Sbjct: 403 SRNQLTSVPAAIRDLRAAGCRLEDCDLTGLLPAEIGCLGALRLLQLAGNELTSVPAEIGQ 462

Query: 320 GPTPALLKYLRSRLPENEDSEAS-TTKEDLITMATRLS--------VTS-KELSLEGMNL 369
             +  +L+  R++L          T+ E L   + RL+        +TS K L L+   L
Sbjct: 463 LTSLEVLELSRNKLTSVPVEIGQLTSLERLYLSSNRLTSLPAEIGQLTSLKRLYLDHNQL 522

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +++P+EI +   +   DL RN +  +P E+ 
Sbjct: 523 TSVPAEIGQLAALQWFDLQRNELTSVPAEIG 553



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 132/252 (52%), Gaps = 2/252 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  NN+  +  ++  L  L    +S NKL+ +PA IG+L  L+ L +  N +  +
Sbjct: 305 LRWLQLGGNNLTSVPAEIGQLTSLMTFGLSDNKLTSVPAEIGQLTSLEVLYLDHNRLASM 364

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+L     SSN+L  +P+ +G+  +L     S N +TS+P  + D  + +   
Sbjct: 365 PAEIGRLTSLTTLFLSSNRLTSVPAEIGQLTSLKGLHLSRNQLTSVPAAIRDL-RAAGCR 423

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +E   LT L    I     L  L  + N L  +P  IG L+ L  L+L +N++ S+P  I
Sbjct: 424 LEDCDLTGLLPAEIGCLGALRLLQLAGNELTSVPAEIGQLTSLEVLELSRNKLTSVPVEI 483

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL   Y+ +N L++LPAE+G+L+ L  L L  NQL     E  QL  L   DL  N
Sbjct: 484 GQLTSLERLYLSSNRLTSLPAEIGQLTSLKRLYLDHNQLTSVPAEIGQLAALQWFDLQRN 543

Query: 286 SLSGLPPEIGKM 297
            L+ +P EIG++
Sbjct: 544 ELTSVPAEIGQL 555



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 163/345 (47%), Gaps = 60/345 (17%)

Query: 12  GSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLT 71
           G L+LS   L  VP E+              +   L+ L L +N +  L  ++  L  L 
Sbjct: 192 GELSLSGNQLTSVPAEI-------------GQLTLLKGLELYYNQLTSLPAEIGQLTSLE 238

Query: 72  VLNVSHNKLSELPAAIGELHM---------------------LKSLD-VSFNSIMKIPDE 109
            L + +N+L+ +PA I EL                       +  LD V F  I  +P E
Sbjct: 239 HLLLDNNQLTSVPAEIRELRAAGCRVDLDDGHWEGVTMENGRVVKLDLVEFGLIGALPAE 298

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           +G  +AL       N L  +P+ +G+  +L  F  S+N +TS+P ++   + +  L ++ 
Sbjct: 299 VGRLSALRWLQLGGNNLTSVPAEIGQLTSLMTFGLSDNKLTSVPAEIGQLTSLEVLYLDH 358

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI--- 226
           N+L  +    I   T LT L  S N L  +P  IG L+ L  L L +N++ S+P++I   
Sbjct: 359 NRLASMPAE-IGRLTSLTTLFLSSNRLTSVPAEIGQLTSLKGLHLSRNQLTSVPAAIRDL 417

Query: 227 --SGC----CSL-----AE---------FYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             +GC    C L     AE           +  N L+++PAE+G+L+ L  L+L  N+L 
Sbjct: 418 RAAGCRLEDCDLTGLLPAEIGCLGALRLLQLAGNELTSVPAEIGQLTSLEVLELSRNKLT 477

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              VE  QL  L  L LS+N L+ LP EIG++T+L++L L  N L
Sbjct: 478 SVPVEIGQLTSLERLYLSSNRLTSLPAEIGQLTSLKRLYLDHNQL 522



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 129/276 (46%), Gaps = 44/276 (15%)

Query: 134 GRC--LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           GR   L L DF  +      +P +L   S + KL + GN+LT L                
Sbjct: 4   GRVVKLELEDFDLTG----VVPAELGRLSALRKLSLHGNELTSL---------------- 43

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P  IG L+ L  L L  N++ S+P+ I    +L E  +  N L ++PAE+G+
Sbjct: 44  --------PAEIGQLTSLEGLRLFGNQLTSVPAEIGQLTALRELSLAANRLMSVPAEIGQ 95

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L+ L  L+L+SNQL     E  QL  L  L L  N L+ +P EIG++T+L  L+L GN  
Sbjct: 96  LTSLRELNLNSNQLTNVPAEIGQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVLVLGGNQF 155

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            ++ + +  G   AL +    RL  N  +        L ++         ELSL G  L+
Sbjct: 156 TSVPAEI--GQLTALREL---RLDGNRLTSVPAEIGQLTSLG--------ELSLSGNQLT 202

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           ++P+EI +   +  L+L  N +  LP E+    SL+
Sbjct: 203 SVPAEIGQLTLLKGLELYYNQLTSLPAEIGQLTSLE 238



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 13/124 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+   L  VP E+              +   L+ L L+ N +  +  ++  L  L  L
Sbjct: 446 LQLAGNELTSVPAEI-------------GQLTSLEVLELSRNKLTSVPVEIGQLTSLERL 492

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +S N+L+ LPA IG+L  LK L +  N +  +P EIG   AL  FD   N+L  +P+ +
Sbjct: 493 YLSSNRLTSLPAEIGQLTSLKRLYLDHNQLTSVPAEIGQLAALQWFDLQRNELTSVPAEI 552

Query: 134 GRCL 137
           G+ L
Sbjct: 553 GQLL 556


>gi|417764010|ref|ZP_12411983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353842|gb|EJP05995.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 427

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 194/403 (48%), Gaps = 23/403 (5%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L + +  L  L +L++S N+L  LP  I +L  L+ LD+S N ++
Sbjct: 27  LDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLI 86

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EI     L   D  SNQL  LP  +G+  NL +   SNN +T+ P+++    K+  
Sbjct: 87  ILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQW 146

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N++  +    I     L  L    N L  +P+ IG L +L  L+L  N+I ++P 
Sbjct: 147 LNLSANQIKTIPKE-IEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQ 205

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I     L   Y+  N L+ LP E+ KL KL +L L +NQL     E  QL+ L VL L+
Sbjct: 206 EIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLN 265

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPE----- 335
           NN L+ +P EIG +  L+ L L  N L T+   +       +L    ++   LP+     
Sbjct: 266 NNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKL 325

Query: 336 NEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
               E   +   L T+   +      +EL L    L+ IP EI +   + +L LS N + 
Sbjct: 326 QNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLI 385

Query: 394 ELPPELSSCASLQV------KFSDLVTNKESC---ISGCYLYW 427
            +P E+    +LQ       +FS  +  KE     +  C +Y+
Sbjct: 386 TIPKEIGQLQNLQTLYLRNNQFS--IEEKERIRKLLPKCQIYF 426



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 15/297 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LSN  L   P E+       G+  K      LQ L L+ N I+ + +++  L  L  
Sbjct: 123 ELYLSNNQLTTFPKEI-------GKLQK------LQWLNLSANQIKTIPKEIEKLQKLQS 169

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+L+ LP  IG+L  L+ L++S+N I  +P EI     L       NQL  LP  
Sbjct: 170 LYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQE 229

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +   L      NN +T+LP+++     +  L +  N+LT +    I     L +L   
Sbjct: 230 IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE-IGHLQNLQDLYLV 288

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  LDL  N++  +P  I    +L E Y+ NN L+ +P E+G+L
Sbjct: 289 SNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQL 348

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
             L  L L +NQL     E  QL+ L  L LSNN L  +P EIG++  L+ L L  N
Sbjct: 349 QNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 405



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 128/253 (50%), Gaps = 14/253 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N  L  +P E+       G+  K      LQ L L++N I+ L +++  L  L  
Sbjct: 169 SLYLPNNQLTTLPQEI-------GKLQK------LQWLNLSYNQIKTLPQEIEKLQKLQW 215

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  I +L  L+SL +  N +  +P EIG    L     ++NQL  +P  
Sbjct: 216 LYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE 275

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL D    +N +T++P+++     +  LD+  N+LT+L    I     L EL  S
Sbjct: 276 IGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKE-IGKLQNLQELYLS 334

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++ +IP  I    +L E Y+ NN L  +P E+G+L
Sbjct: 335 NNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQL 394

Query: 253 SKLGTLDLHSNQL 265
             L TL L +NQ 
Sbjct: 395 QNLQTLYLRNNQF 407



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 109/230 (47%), Gaps = 14/230 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   ++ +P E+ K                LQ L L  N +  L +++  L  L  L
Sbjct: 193 LNLSYNQIKTLPQEIEK-------------LQKLQWLYLHKNQLTTLPQEIEKLQKLESL 239

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + +N+L+ LP  IG+L  LK L ++ N +  IP EIG    L      SNQL  +P  +
Sbjct: 240 GLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEI 299

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL      NN +T LP+++     + +L +  N+LT +    I     L EL  S 
Sbjct: 300 GQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKE-IGQLQNLQELYLSN 358

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
           N L  +P+ IG L  L  L L  N++++IP  I    +L   Y+ NN  S
Sbjct: 359 NQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFS 408



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 13/161 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+N  L  +P E+                 +LQ L L  N +  + +++  L  L +L
Sbjct: 262 LFLNNNQLTTIPQEI-------------GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQML 308

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  L+ L +S N +  IP EIG    L +   S+NQL  +P  +
Sbjct: 309 DLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEI 368

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           G+  NL +   SNN + ++P+++     +  L +  N+ ++
Sbjct: 369 GQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSI 409


>gi|417761876|ref|ZP_12409877.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776956|ref|ZP_12424785.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418673273|ref|ZP_13234595.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942287|gb|EKN87903.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573245|gb|EKQ36298.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579766|gb|EKQ47605.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 374

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 185/392 (47%), Gaps = 49/392 (12%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L+ N I  L +++R L  L +L++  N+L+ LP  IG+L  L+ L +S N +  
Sbjct: 21  NLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTT 80

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L   + S+NQ+K +P  + +   L      NN +T+LP+++    K+  L
Sbjct: 81  FPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWL 140

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N++  L    I     L  L   KN L  +P+ I  L +L  L L  N++ ++P  
Sbjct: 141 NLSYNQIKTLPQE-IEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQE 199

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+G L  L  L L SNQL     E  QL+ L +LDL N
Sbjct: 200 IGQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGN 259

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EIGK+  L+ L L+ N L T+         P  +  L++             
Sbjct: 260 NQLTILPKEIGKLQNLQWLYLSNNQLTTI---------PKEIGQLQNL------------ 298

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                          +EL L    L+ IP EI +   + +L LS N +  +P E+    +
Sbjct: 299 ---------------QELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQN 343

Query: 405 LQV------KFSDLVTNKESC---ISGCYLYW 427
           LQ       +FS  +  KE     +  C +Y+
Sbjct: 344 LQTLYLRNNQFS--IEEKERIRKLLPKCQIYF 373



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 127/253 (50%), Gaps = 14/253 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N  L  +P E+       G+  K      LQ L L++N I+ L +++  L  L  
Sbjct: 116 SLYLPNNQLTTLPQEI-------GKLQK------LQWLNLSYNQIKTLPQEIEKLQKLQW 162

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  I +L  L+SL +  N +  +P EIG    L     ++NQL  LP  
Sbjct: 163 LYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTLPQE 222

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL D    +N +T++P+++     +  LD+  N+LT+L    I     L  L  S
Sbjct: 223 IGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKE-IGKLQNLQWLYLS 281

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++ +IP  I    +L E Y+ NN L  +P E+G+L
Sbjct: 282 NNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQL 341

Query: 253 SKLGTLDLHSNQL 265
             L TL L +NQ 
Sbjct: 342 QNLQTLYLRNNQF 354


>gi|73669795|ref|YP_305810.1| leucine-rich repeat-containing protein [Methanosarcina barkeri str.
           Fusaro]
 gi|72396957|gb|AAZ71230.1| leucine-rich-repeat protein [Methanosarcina barkeri str. Fusaro]
          Length = 863

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 163/316 (51%), Gaps = 22/316 (6%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L++ N+  L  ++  L   T L +S+N+L+ LP  I EL  LK LD+S+N +  +P +
Sbjct: 21  LRLSYKNLTSLPPEISELKNFTKLYISYNQLTSLPPEISELKNLKQLDISYNQLTSLPPD 80

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           I     L + +  +NQL  LP  + +  NL     S N +TSLP  + +   +++L +  
Sbjct: 81  ISKLKNLTQLNIRNNQLTSLPPGISKLKNLKQLDISENQLTSLPSGITELKDLTQLSISK 140

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+LT L    I+    L +L  S+N L  +P  I  L  L ++++++N++ S+P  IS  
Sbjct: 141 NQLTSLPPE-ISKLKNLKQLSISRNQLTSLPPEILELKSLTQINIYENQLTSLPHEISEL 199

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            SL +  +  N L++LP+E+  L  L  LD+  NQL    +E  +L+ L+ LD+S+N L+
Sbjct: 200 KSLTQLSISGNQLTSLPSEIANLESLTQLDISRNQLTSLPLEITELKNLTQLDISSNKLT 259

Query: 289 GLPPEI---------GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPE 335
            LPPEI         G  +  + + L GNPL      +V     A++ Y +S    + P 
Sbjct: 260 SLPPEILKLGIDIEWGNNSAEKGIFLEGNPLEKPPIEIVKQGREAVINYFKSLEGEKKPL 319

Query: 336 NE-------DSEASTT 344
           NE       D EA  T
Sbjct: 320 NEVKVLLVGDGEAGKT 335



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 61/306 (19%)

Query: 95  SLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE 154
           +L +S+ ++  +P EI       K   S NQL  LP  +    NL     S N +TSLP 
Sbjct: 20  ALRLSYKNLTSLPPEISELKNFTKLYISYNQLTSLPPEISELKNLKQLDISYNQLTSLPP 79

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           D++    +++L++  N+LT                         +P  I  L  L +LD+
Sbjct: 80  DISKLKNLTQLNIRNNQLT------------------------SLPPGISKLKNLKQLDI 115

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
            +N++ S+PS I+    L +  +  N L++LP E+ KL  L  L +  NQL     E  +
Sbjct: 116 SENQLTSLPSGITELKDLTQLSISKNQLTSLPPEISKLKNLKQLSISRNQLTSLPPEILE 175

Query: 275 LR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L+ L+ +++  N L+ LP EI ++ +L +L ++GN L +L S + N              
Sbjct: 176 LKSLTQINIYENQLTSLPHEISELKSLTQLSISGNQLTSLPSEIAN-------------- 221

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
                          +   T+L ++  +L+       ++P EI E   +T+LD+S N + 
Sbjct: 222 ---------------LESLTQLDISRNQLT-------SLPLEITELKNLTQLDISSNKLT 259

Query: 394 ELPPEL 399
            LPPE+
Sbjct: 260 SLPPEI 265



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 43/265 (16%)

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +E NK T L     A    +T L  S   L  +P  I  L    +L +  N++ S+P  I
Sbjct: 1   MESNKTTDLIRR--AQRNKVTALRLSYKNLTSLPPEISELKNFTKLYISYNQLTSLPPEI 58

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ-------------LKEYCVEAC 273
           S   +L +  +  N L++LP ++ KL  L  L++ +NQ             LK+  +   
Sbjct: 59  SELKNLKQLDISYNQLTSLPPDISKLKNLTQLNIRNNQLTSLPPGISKLKNLKQLDISEN 118

Query: 274 QLR-----------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           QL            L+ L +S N L+ LPPEI K+  L++L ++ N L +L         
Sbjct: 119 QLTSLPSGITELKDLTQLSISKNQLTSLPPEISKLKNLKQLSISRNQLTSL--------P 170

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAG 380
           P +L+ L+S       ++ +  +  L ++   +S      +LS+ G  L+++PSEI    
Sbjct: 171 PEILE-LKSL------TQINIYENQLTSLPHEISELKSLTQLSISGNQLTSLPSEIANLE 223

Query: 381 EITKLDLSRNSIQELPPELSSCASL 405
            +T+LD+SRN +  LP E++   +L
Sbjct: 224 SLTQLDISRNQLTSLPLEITELKNL 248



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 37/166 (22%)

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L++LP E+ +L     L +  NQL     E  +L+ L  LD+S N L+ LPP+I K+  L
Sbjct: 28  LTSLPPEISELKNFTKLYISYNQLTSLPPEISELKNLKQLDISYNQLTSLPPDISKLKNL 87

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
            +L +  N L +L       P  + LK L                              K
Sbjct: 88  TQLNIRNNQLTSL------PPGISKLKNL------------------------------K 111

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +L +    L+++PS I E  ++T+L +S+N +  LPPE+S   +L+
Sbjct: 112 QLDISENQLTSLPSGITELKDLTQLSISKNQLTSLPPEISKLKNLK 157


>gi|418707299|ref|ZP_13268125.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772346|gb|EKR47534.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 400

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 183/391 (46%), Gaps = 45/391 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ LIL+   +  L ++++ L  L +L++ HN+L+ LP  IG+L  L+ L + +N + 
Sbjct: 46  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     ++NQL  LP+ + +  NL      NN +T+LP+++     +  
Sbjct: 106 ALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQL 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  ++LT+L    I     L EL  S N L  +P+ IG L  L R  L  N++  +P 
Sbjct: 166 LSLYESQLTILPQE-IGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+G+N L+ LP E+G+L  L    L +NQ      E  QL+ L  L LS
Sbjct: 225 EIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLS 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+  P EIGK+  L+ L L  N L TL         P  ++ L++            
Sbjct: 285 YNQLTTFPKEIGKLQKLQTLNLWNNQLTTL---------PEEIEQLKNL----------- 324

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                           K L+L    L  IP EI +   +  LDLS N +  LP E+    
Sbjct: 325 ----------------KTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLK 368

Query: 404 SLQV------KFSDLVTNK-ESCISGCYLYW 427
           +LQ       +FS     K    +  C +Y+
Sbjct: 369 NLQTLNLWNNQFSSQEKEKIRKLLPKCQIYF 399


>gi|417782200|ref|ZP_12429933.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777793|gb|EKR62438.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 381

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/275 (35%), Positives = 142/275 (51%), Gaps = 25/275 (9%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E  +N   + VLN++  +L+ LP  I +   LK LD+S N +  +P EIG    L   
Sbjct: 39  LTEAFKNPMDVRVLNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQVL 98

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           + S+N L  LP  + +  NL     S N +T+LP+++    K+  L V  N+LTVL    
Sbjct: 99  NLSANNLINLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKE- 157

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L EL+   N L  +PE IG L +  RL LH N++ ++P  +    +L + Y+  
Sbjct: 158 IGQLQNLKELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLTTLPQGLCKLQNLEQIYLHQ 217

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------------------------ 275
           N L++LP E+G+L KL TL L+SN+L     E  QL                        
Sbjct: 218 NRLTSLPQEIGQLGKLWTLYLYSNELTTLPEEIGQLQNLRQLNLKLNNLTTLPKEIGQLQ 277

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           +L  LDLS+N L+ +P EIG++  LR L L+GNPL
Sbjct: 278 KLDNLDLSDNQLTSIPKEIGQLQNLRWLDLSGNPL 312



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 152/297 (51%), Gaps = 15/297 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+ R L  +P E+ K               +L++L L+ N ++ L +++  L  L VL
Sbjct: 52  LNLNERQLTVLPKEIEK-------------FQNLKQLDLSDNQLKVLPKEIGQLQNLQVL 98

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S N L  LP  I +L  LK L++S N +  +P EIG    L     S N+L  LP  +
Sbjct: 99  NLSANNLINLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKEI 158

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL +     N +T+LPE++    K  +L +  N+LT L   L      L ++   +
Sbjct: 159 GQLQNLKELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLTTLPQGL-CKLQNLEQIYLHQ 217

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG L +L  L L+ N + ++P  I    +L +  +  N L+ LP E+G+L 
Sbjct: 218 NRLTSLPQEIGQLGKLWTLYLYSNELTTLPEEIGQLQNLRQLNLKLNNLTTLPKEIGQLQ 277

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           KL  LDL  NQL     E  QL+ L  LDLS N L  LP EIG++  L  L + G P
Sbjct: 278 KLDNLDLSDNQLTSIPKEIGQLQNLRWLDLSGNPLVILPKEIGQLKNLYFLAMKGIP 334



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 140/315 (44%), Gaps = 61/315 (19%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ L+++   +  +P EI     L + D S NQLK LP  +G+  NL     S N + +L
Sbjct: 49  VRVLNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQVLNLSANNLINL 108

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + +L++ GN+LT L                        P+ IG L +L  L
Sbjct: 109 PKEIDQLQNLKRLNLSGNRLTTL------------------------PQEIGQLKKLEWL 144

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            +  NR+  +P  I    +L E  +  N+L+ LP E+G+L K   L LH NQL       
Sbjct: 145 HVSHNRLTVLPKEIGQLQNLKELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLTTLPQGL 204

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
           C+L+ L  + L  N L+ LP EIG++  L  L L  N L TL   +        L+ LR 
Sbjct: 205 CKLQNLEQIYLHQNRLTSLPQEIGQLGKLWTLYLYSNELTTLPEEI------GQLQNLR- 257

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                        +L+L+  NL+ +P EI +  ++  LDLS N 
Sbjct: 258 -----------------------------QLNLKLNNLTTLPKEIGQLQKLDNLDLSDNQ 288

Query: 392 IQELPPELSSCASLQ 406
           +  +P E+    +L+
Sbjct: 289 LTSIPKEIGQLQNLR 303



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 39/267 (14%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           +L E   +   +  L++   +LTVL    I  +  L +L  S N L  +P+ IG L  L 
Sbjct: 38  TLTEAFKNPMDVRVLNLNERQLTVLPKE-IEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQ 96

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            L+L  N ++++P  I    +L    +  N L+ LP E+G+L KL               
Sbjct: 97  VLNLSANNLINLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKL--------------- 141

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
                    L +S+N L+ LP EIG++  L++LLL GN L TL   +       L K+ R
Sbjct: 142 -------EWLHVSHNRLTVLPKEIGQLQNLKELLLYGNSLTTLPEEI-----GQLQKFER 189

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L    D++ +T  + L  +        +++ L    L+++P EI + G++  L L  N
Sbjct: 190 LYL---HDNQLTTLPQGLCKLQ-----NLEQIYLHQNRLTSLPQEIGQLGKLWTLYLYSN 241

Query: 391 SIQELPPELSSCASLQ---VKFSDLVT 414
            +  LP E+    +L+   +K ++L T
Sbjct: 242 ELTTLPEEIGQLQNLRQLNLKLNNLTT 268


>gi|443691592|gb|ELT93406.1| hypothetical protein CAPTEDRAFT_215585 [Capitella teleta]
          Length = 534

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 192/391 (49%), Gaps = 34/391 (8%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           +VPN VY                 L  L L  N I+ +++D+RNL  LT+L++  NK+ E
Sbjct: 136 EVPNVVYS-------------LASLTHLFLRFNRIKVVEDDIRNLKNLTMLSLRENKIKE 182

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP+ IG+L  L + DVS N +  +P+E+G    +   D   N+L ++P S+G    L+  
Sbjct: 183 LPSGIGQLFNLSTFDVSHNHLEHLPEELGQCVQMNSLDLQHNELLDIPESIGNLTLLTRL 242

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
               N + S+P  L++C  M + +VEGN ++ L   L++S T L  +  S+N     P  
Sbjct: 243 GLRYNRLNSVPRSLSNCVNMDEFNVEGNNISQLPEGLLSSLTKLQSITLSRNAFASYP-- 300

Query: 203 IGSLSRL---IRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +G  ++      ++L  N+I  +P  I S    L +  M +N LS+LP ++G  + +  L
Sbjct: 301 VGGPAQFCSAYSINLEHNQINKVPFGIFSQASCLTKLNMKDNQLSSLPLDIGTWANMVEL 360

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           +L +NQL +   +   L  L VL LSNNSL  LP  IG +  LR L L  N L +L    
Sbjct: 361 NLGTNQLMKISEDIKDLVNLEVLTLSNNSLKRLPATIGNLKKLRHLDLEENKLESL---- 416

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                P  + +L+        S   T+    I   + L    + L     NL+ IP EI 
Sbjct: 417 -----PQEIGFLKELTKLVVQSNQITSLPRAIGHLSNL----QYLGAGENNLTNIPKEIG 467

Query: 378 EAGEITKLDLSRN-SIQELPPELSSCASLQV 407
               +  L ++ N ++  LP EL+ C++LQ+
Sbjct: 468 TLENLESLYINDNPNLHNLPFELALCSNLQI 498



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 141/305 (46%), Gaps = 19/305 (6%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D   + +  LPSS+     L++     N   +LP +L   + +  L +  N L  L 
Sbjct: 56  IRLDLCKSSITTLPSSIKELSQLTEIFLYGNKFVTLPPELGHLANLDTLALSENSLQSLP 115

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           + L A+   L  L    N L  +P  + SL+ L  L L  NRI  +   I    +L    
Sbjct: 116 DTL-ANLRRLRVLDLRHNKLCEVPNVVYSLASLTHLFLRFNRIKVVEDDIRNLKNLTMLS 174

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LP+ +G+L  L T D+  N L+    E  Q ++++ LDL +N L  +P  IG
Sbjct: 175 LRENKIKELPSGIGQLFNLSTFDVSHNHLEHLPEELGQCVQMNSLDLQHNELLDIPESIG 234

Query: 296 KMTTLRKLLLTGNPLRTLRSSL---VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            +T L +L L  N L ++  SL   VN     +     S+LPE   S  S TK   IT++
Sbjct: 235 NLTLLTRLGLRYNRLNSVPRSLSNCVNMDEFNVEGNNISQLPEGLLS--SLTKLQSITLS 292

Query: 353 TRLSV-----------TSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELS 400
                           ++  ++LE   ++ +P  I+ +A  +TKL++  N +  LP ++ 
Sbjct: 293 RNAFASYPVGGPAQFCSAYSINLEHNQINKVPFGIFSQASCLTKLNMKDNQLSSLPLDIG 352

Query: 401 SCASL 405
           + A++
Sbjct: 353 TWANM 357



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 94/213 (44%), Gaps = 40/213 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           IRLDL ++ I ++PSSI     L E ++  N    LP ELG L+ L TL L  N L+   
Sbjct: 56  IRLDLCKSSITTLPSSIKELSQLTEIFLYGNKFVTLPPELGHLANLDTLALSENSLQSLP 115

Query: 270 -VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
              A   RL VLDL +N L  +P  +  + +L  L L  N ++ +   + N      LK 
Sbjct: 116 DTLANLRRLRVLDLRHNKLCEVPNVVYSLASLTHLFLRFNRIKVVEDDIRN------LKN 169

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           L                    TM          LSL    +  +PS I +   ++  D+S
Sbjct: 170 L--------------------TM----------LSLRENKIKELPSGIGQLFNLSTFDVS 199

Query: 389 RNSIQELPPELSSCA---SLQVKFSDLVTNKES 418
            N ++ LP EL  C    SL ++ ++L+   ES
Sbjct: 200 HNHLEHLPEELGQCVQMNSLDLQHNELLDIPES 232


>gi|260812948|ref|XP_002601182.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
 gi|229286473|gb|EEN57194.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
          Length = 462

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 195/396 (49%), Gaps = 34/396 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS+  L  +P EV             W+   L+ L L+ N ++ L  ++  L  +  L
Sbjct: 97  LDLSHCQLHTLPLEV-------------WKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHL 143

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S  +L  LP+ +G L  L+ LD+S N +  +P E+G  T L K D  SN L+ LP+ +
Sbjct: 144 DLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQTLPAEVGHLTNLEKLDLCSNPLQTLPAEV 203

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G C N+     S+  + +LP ++   +++  LD+  N L  L    +   T +  L  S 
Sbjct: 204 GHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLDLRSNPLQTLPTE-VGHLTNVKYLNLSD 262

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
             L+ +P  +G L++L +LDL  N + ++P+ +  C ++    + +  L  LP E+ KL+
Sbjct: 263 CQLHILPPEVGRLTQLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLT 322

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           +L  L L SN L+    E  QL  +  L+LS+  L  LPPE+GK+T L +L L+ NPL+T
Sbjct: 323 QLEWLSLSSNPLQTLPAEVGQLTNVKQLNLSDCQLHTLPPEVGKLTQLERLDLSSNPLQT 382

Query: 313 LRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L +    L N     L + L   LP              +   T+L    + L L    L
Sbjct: 383 LPAEVGQLTNVKHLDLSQCLLHTLPPE------------VGRLTQL----EWLDLRSNPL 426

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            A+P+E+ +   +  LDLS   +  LPPE+     L
Sbjct: 427 HALPAEVGQLTNVKHLDLSHCQLHTLPPEVGRLTQL 462



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 191/400 (47%), Gaps = 35/400 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +++ L L+   +  L  ++  L  L  L++S N L  LPA +G+L  +K L++S   +  
Sbjct: 1   NIKHLDLSDCQLHTLPPEVGKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQLRT 60

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+G  T L   D SSN L+ LP+ +G+  N+     S+  + +LP ++   +++  L
Sbjct: 61  LPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSHCQLHTLPLEVWKLTQLEWL 120

Query: 166 DVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGMPETI 203
           D+  N L  L   +                      +   T L  L  S N L  +P  +
Sbjct: 121 DLSSNPLQTLPAEVGQLTNVKHLDLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQTLPAEV 180

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L+ L +LDL  N + ++P+ +  C ++    + +  L  LP E+ KL++L  LDL SN
Sbjct: 181 GHLTNLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLDLRSN 240

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
            L+    E   L  +  L+LS+  L  LPPE+G++T L KL L  NPL+TL + + +   
Sbjct: 241 PLQTLPTEVGHLTNVKYLNLSDCQLHILPPEVGRLTQLEKLDLCSNPLQTLPAEVGHCTN 300

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT----------SKELSLEGMNLSAI 372
              L     +L          T+ + +++++    T           K+L+L    L  +
Sbjct: 301 VKHLDLSHCQLRTLPFEVWKLTQLEWLSLSSNPLQTLPAEVGQLTNVKQLNLSDCQLHTL 360

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDL 412
           P E+ +  ++ +LDLS N +Q LP E+    +  VK  DL
Sbjct: 361 PPEVGKLTQLERLDLSSNPLQTLPAEVGQLTN--VKHLDL 398



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 197/406 (48%), Gaps = 36/406 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  LR +P EV +                L+ L L+ N ++ L  ++  L  +  L
Sbjct: 51  LNLSHCQLRTLPPEVGR-------------LTQLEWLDLSSNPLQTLPAEVGQLTNVKHL 97

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++SH +L  LP  + +L  L+ LD+S N +  +P E+G  T +   D S  QL+ LPS +
Sbjct: 98  DLSHCQLHTLPLEVWKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSQCQLRTLPSEV 157

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           GR   L     S+N + +LP ++   + + KLD+  N L  L    +   T +  L  S 
Sbjct: 158 GRLTQLEWLDLSSNPLQTLPAEVGHLTNLEKLDLCSNPLQTLPAE-VGHCTNVKHLDLSH 216

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
             L  +P  +  L++L  LDL  N + ++P+ +    ++    + +  L  LP E+G+L+
Sbjct: 217 CQLRTLPFEVWKLTQLEWLDLRSNPLQTLPTEVGHLTNVKYLNLSDCQLHILPPEVGRLT 276

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           +L  LDL SN L+    E      +  LDLS+  L  LP E+ K+T L  L L+ NPL+T
Sbjct: 277 QLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLSLSSNPLQT 336

Query: 313 LRSSLVNGPTPALLKYLRSRLPEN-EDSEASTTKEDL--ITMATRLSVTSKELSLEGMNL 369
           L         PA +  L +    N  D +  T   ++  +T   RL ++S         L
Sbjct: 337 L---------PAEVGQLTNVKQLNLSDCQLHTLPPEVGKLTQLERLDLSSNP-------L 380

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTN 415
             +P+E+ +   +  LDLS+  +  LPPE+      Q+++ DL +N
Sbjct: 381 QTLPAEVGQLTNVKHLDLSQCLLHTLPPEVGRLT--QLEWLDLRSN 424


>gi|195452978|ref|XP_002073584.1| GK13066 [Drosophila willistoni]
 gi|194169669|gb|EDW84570.1| GK13066 [Drosophila willistoni]
          Length = 650

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 174/342 (50%), Gaps = 17/342 (4%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVY--KNFDEAG-----------EGDKWWEAVDLQKLIL 52
           K AR SG+LNLSN+ L  VP ++Y   + DE             E D WW  V +  L L
Sbjct: 57  KLARRSGNLNLSNKGLARVPQKLYDINDVDEDSKAANLEQLCIKEEDAWWNQVPITNLDL 116

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           + N + +L   + NL  LTVL +  N L ELP  IG+L  L  L++S N + ++P E+ S
Sbjct: 117 SSNTLSRLSPKIENLMTLTVLILHDNALVELPPQIGKLEKLTRLNLSHNKLSQLPRELFS 176

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
              L   + S N+  EL   +     L    AS+N + SLP  +    +++ L +  N +
Sbjct: 177 LPVLRHLNISYNEFTELNPDVSDLHMLEWLDASHNKLQSLPGGIGFLVRLTSLLLPYNHI 236

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
             L  +L+ +  +L +L   +N +  +P+ +G + +L  L +  N I  +P    G  +L
Sbjct: 237 KELPPDLV-NMRVLQKLDLMQNDIIKLPDDMGLIRKLECLYIQHNDIKELPE-FEGNEAL 294

Query: 233 AEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
            E +  NN ++++P  L   L  L   DL  NQ+ +   E C LR L  LD+SNNS+S L
Sbjct: 295 TEVHASNNYITSIPKGLCTNLPHLKIFDLRDNQITQLPDEVCLLRNLQRLDVSNNSISVL 354

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           P  +  +  L  L + GNP++T+R  ++   T  +LK L+ R
Sbjct: 355 PVTLSSLAHLVNLQVEGNPIKTIRRDIIQCGTTRILKVLQDR 396



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 100/191 (52%), Gaps = 5/191 (2%)

Query: 149 ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +T++P+ + + ++   ++ +D   NKL  L N L     ++ EL+ S NL++ +P+ I  
Sbjct: 459 LTNVPDQVFEIARSENVNVVDFARNKLGTLPNGLQYMRDLVKELVLSHNLISFVPQFISQ 518

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            +R+  L+L  N +  +P       +L E  + NN    +P+ L +L +L  L    N +
Sbjct: 519 FTRITFLNLSNNLLKELPKEFGVLNTLRELNIANNRFDCIPSCLYELQRLEILVASENHI 578

Query: 266 KEYCVEACQLR--LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           KE  V   +    L+ LDL NN +  +PP +G +T +  L L GNP R  R  ++   T 
Sbjct: 579 KELNVSGLKAMSCLATLDLRNNDIEFIPPILGNLTNITHLELIGNPFRQPRHQILIKGTE 638

Query: 324 ALLKYLRSRLP 334
           +++ YLR R+P
Sbjct: 639 SIMSYLRDRIP 649



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 160/405 (39%), Gaps = 84/405 (20%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQKL L  N+I KL +D+  +  L  L + HN + ELP   G    L  +  S N I  I
Sbjct: 249 LQKLDLMQNDIIKLPDDMGLIRKLECLYIQHNDIKELPEFEGN-EALTEVHASNNYITSI 307

Query: 107 PDEIGSATALVK-FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P  + +    +K FD   NQ+ +LP  +    NL     SNN I+ LP  L+  + +  L
Sbjct: 308 PKGLCTNLPHLKIFDLRDNQITQLPDEVCLLRNLQRLDVSNNSISVLPVTLSSLAHLVNL 367

Query: 166 DVEGNKLTVLSNNLIASWT-----------------------------MLTELIASKNLL 196
            VEGN +  +  ++I   T                              LTE + +  L 
Sbjct: 368 QVEGNPIKTIRRDIIQCGTTRILKVLQDRAQAQPKEKGGANGGSGSGGSLTETMDALRLG 427

Query: 197 NG------MPETIGSLSRLIR---LDLHQNRILSIPSSI-----SGCCSLAEFYMGNNAL 242
            G      MPE      +L     L ++   + ++P  +     S   ++ +F    N L
Sbjct: 428 GGQTNDGIMPENFPDRYKLRHTHTLAVNLEELTNVPDQVFEIARSENVNVVDF--ARNKL 485

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTL 300
             LP  L  +  L    + S+ L  +  +      R++ L+LSNN L  LP E G + TL
Sbjct: 486 GTLPNGLQYMRDLVKELVLSHNLISFVPQFISQFTRITFLNLSNNLLKELPKEFGVLNTL 545

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           R+L +  N    + S L          Y   RL      E     E+ I          K
Sbjct: 546 RELNIANNRFDCIPSCL----------YELQRL------EILVASENHI----------K 579

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           EL++ G+   +          +  LDL  N I+ +PP L +  ++
Sbjct: 580 ELNVSGLKAMSC---------LATLDLRNNDIEFIPPILGNLTNI 615



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 130/316 (41%), Gaps = 39/316 (12%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPET 202
           SN  +  +P+ L D + + +     N   +      A W    +T L  S N L+ +   
Sbjct: 68  SNKGLARVPQKLYDINDVDEDSKAANLEQLCIKEEDAWWNQVPITNLDLSSNTLSRLSPK 127

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           I +L  L  L LH N ++ +P  I     L    + +N LS LP EL  L  L  L++  
Sbjct: 128 IENLMTLTVLILHDNALVELPPQIGKLEKLTRLNLSHNKLSQLPRELFSLPVLRHLNISY 187

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+  E   +   L  L  LD S+N L  LP  IG +  L  LLL  N ++ L   LVN  
Sbjct: 188 NEFTELNPDVSDLHMLEWLDASHNKLQSLPGGIGFLVRLTSLLLPYNHIKELPPDLVNMR 247

Query: 322 TPALLKYLRS--------------------------RLPENEDSEAST---TKEDLITMA 352
               L  +++                           LPE E +EA T      + IT  
Sbjct: 248 VLQKLDLMQNDIIKLPDDMGLIRKLECLYIQHNDIKELPEFEGNEALTEVHASNNYITSI 307

Query: 353 TRLSVTS----KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA---SL 405
            +   T+    K   L    ++ +P E+     + +LD+S NSI  LP  LSS A   +L
Sbjct: 308 PKGLCTNLPHLKIFDLRDNQITQLPDEVCLLRNLQRLDVSNNSISVLPVTLSSLAHLVNL 367

Query: 406 QVKFSDLVTNKESCIS 421
           QV+ + + T +   I 
Sbjct: 368 QVEGNPIKTIRRDIIQ 383



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 1/146 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELH-MLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           + V++ + NKL  LP  +  +  ++K L +S N I  +P  I   T +   + S+N LKE
Sbjct: 475 VNVVDFARNKLGTLPNGLQYMRDLVKELVLSHNLISFVPQFISQFTRITFLNLSNNLLKE 534

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP   G    L +   +NN    +P  L +  ++  L    N +  L+ + + + + L  
Sbjct: 535 LPKEFGVLNTLRELNIANNRFDCIPSCLYELQRLEILVASENHIKELNVSGLKAMSCLAT 594

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDL 214
           L    N +  +P  +G+L+ +  L+L
Sbjct: 595 LDLRNNDIEFIPPILGNLTNITHLEL 620


>gi|388329668|gb|AFK29223.1| scribbled, partial [Drosophila buzzatii]
          Length = 499

 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 171/352 (48%), Gaps = 35/352 (9%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK----------------------NFDEAGEGD 39
           + IL+ +RT   L L    +RD+P   ++                      NF+   E D
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELD 89

Query: 40  KWWEAV--------DLQKLILAH---NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
                +         LQ L +A    N I KL      L  LTVL ++   L+ LPA  G
Sbjct: 90  VSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFG 149

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+SL++  N +  +P+ I   T L + D   N++++LP  LG   NL +    +N 
Sbjct: 150 SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPNLHELWLDHNQ 209

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +  LP +L   +K++ LDV  N+L  L N  I     LT+L  ++NLL  +P+ I  LSR
Sbjct: 210 LQRLPPELGLLTKLTYLDVSENRLEELPNE-IGGMVSLTDLDLAQNLLETLPDGISKLSR 268

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L L QNR+  +  ++  C ++ E  +  N LS LPA +G ++KL  L++  N L+  
Sbjct: 269 LTILKLDQNRLQRLNETLGNCENMQELILTENFLSELPASIGNMTKLSNLNVDRNALEYL 328

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  L  SLVN
Sbjct: 329 PLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVN 380



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 172/362 (47%), Gaps = 38/362 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPAD----------- 147

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 148 -------------FGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNN 285
               +L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E    + L+ LDL+ N
Sbjct: 195 GYLPNLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N      L      L EN  SE   + 
Sbjct: 255 LLETLPDGISKLSRLTILKLDQNRLQRLNETLGNCENMQELI-----LTENFLSELPAS- 308

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I   T+LS     L+++   L  +P EI +   +  L L  N +++LPPEL +C  L
Sbjct: 309 ---IGNMTKLS----NLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 406 QV 407
            V
Sbjct: 362 HV 363



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 132/240 (55%), Gaps = 1/240 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPNLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +G  ++L+D   + N + +LP+ ++  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDGISKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N  + +   + ELI ++N L+ +P +IG++++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NETLGNCENMQELILTENFLSELPASIGNMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N 
Sbjct: 333 GQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSENQ 392



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+       G        V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEI------GG-------MVSLTDLDLAQNLLETLPDGISKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG+ T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNETLGNCENMQELILTENFLSELPASIGNMTKLSNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 14/177 (7%)

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L E ++  N +  LP    +L++L  L L  N++     +      L  LD+S N +  
Sbjct: 38  TLEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPD 97

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           +P +I  + +L+    + NP+  L S         +L           D   +T   D  
Sbjct: 98  IPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL--------NDMSLTTLPADFG 149

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           ++ T+L    + L L    L  +P  I +  ++ +LDL  N I++LPP L    +L 
Sbjct: 150 SL-TQL----ESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPNLH 201


>gi|118399299|ref|XP_001031975.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
 gi|89286311|gb|EAR84312.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
          Length = 5365

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 207/408 (50%), Gaps = 18/408 (4%)

Query: 5    LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
            LK AR +G L L    L++ P ++ + + +    D WWE   L KL L++N I+++ ED 
Sbjct: 1565 LKRARRTGQLTLIGLELKEFPKQIAQ-YQDLQLDDNWWEIAPLTKLDLSNNEIKQIPEDF 1623

Query: 65   RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             +   + ++ + +NKL  LP ++ +L  LKS+D S N I ++P  +    +LV+ + S N
Sbjct: 1624 THEKEIQLVRMLNNKLFTLPNSLFQLTQLKSIDFSKNQIKQLPYSLVQCPSLVEINLSEN 1683

Query: 125  QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
            +++ELP ++    NL     S N + ++P  L + + + K+D+  NK++ +     +   
Sbjct: 1684 KIEELPMNMHYLQNLEILNLSQNNLRAVPIFL-EKTPLKKVDLSENKISHIPQPAFSGCL 1742

Query: 185  MLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
            +L  LI SKNL+  + E    +L  L+ L L QNR++     +     L +  +  N + 
Sbjct: 1743 LLENLILSKNLIQQIDEGAFQNLKSLVNLYLDQNRLVEF-QEVPQSEKLDQLVLSYNRIE 1801

Query: 244  ALPAELGKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
            +   +   +  L  L +++N+LK  +  +  C+  +  LDL+NN L  +P EIG +  L 
Sbjct: 1802 SF-TQFENIPNLSALVINNNKLKNLDKSILICK-NIKTLDLTNNDLPDIPSEIGLLPKLV 1859

Query: 302  KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST---------TKEDLITMA 352
            +  + GNPL+ +R+++ N    A+ KYLR R+  +     S           K D I + 
Sbjct: 1860 RFTVEGNPLKCIRNTIKNAGAEAIKKYLRDRIQGDYTQVESAMDPKMNFIQKKLDPIEVL 1919

Query: 353  TRLSVTSKELSLEGMNLSAIPSE-IWEAGEITKLDLSRNSIQELPPEL 399
             R    + E  +   NL+    E ++    +T LD+S N IQ +P +L
Sbjct: 1920 LREFYRNNEFIVSNQNLTKFDDERLYNLKGLTHLDISNNKIQIIPEQL 1967



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 163/397 (41%), Gaps = 118/397 (29%)

Query: 32   FDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELH 91
            F E  + +K      L +L+L++N IE   +   N+P L+ L +++NKL  L  +I    
Sbjct: 1781 FQEVPQSEK------LDQLVLSYNRIESFTQ-FENIPNLSALVINNNKLKNLDKSILICK 1833

Query: 92   MLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK------------------------ 127
             +K+LD++ N +  IP EIG    LV+F    N LK                        
Sbjct: 1834 NIKTLDLTNNDLPDIPSEIGLLPKLVRFTVEGNPLKCIRNTIKNAGAEAIKKYLRDRIQG 1893

Query: 128  ---ELPSSLGRCLNL------------------SDFKASNNCITSLP-EDLADCSKMSKL 165
               ++ S++   +N                   ++F  SN  +T    E L +   ++ L
Sbjct: 1894 DYTQVESAMDPKMNFIQKKLDPIEVLLREFYRNNEFIVSNQNLTKFDDERLYNLKGLTHL 1953

Query: 166  DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            D+  NK+ ++   L+     L++L A+ N L  +P++I  L +L  L+  QN I      
Sbjct: 1954 DISNNKIQIIPEQLVNYEKSLSKLHANNNNLIALPQSILQLRQLQSLEFKQNNI------ 2007

Query: 226  ISGCCSLAEFYMGNNA-----------LSALPAELGKLS-----------KLGTLDLHSN 263
                    E++  NN+           L  L   + KL             L  L+L  N
Sbjct: 2008 --------EYFFDNNSQLKQCWQVFPNLQHLDLSINKLKSISGLIISFMPSLRVLNLAYN 2059

Query: 264  QLKE----YCVEACQLRLSVLDLSNNSLSGL------------------------PPEIG 295
            Q+ +    +   A   +L V+D+SNNSL  L                        P E+G
Sbjct: 2060 QISDLSPLFSTSAKLNKLEVIDVSNNSLQELSEQIAYTLPMLQNLNLENNNLQKIPTELG 2119

Query: 296  KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
             M  L+ L + GNPL+ ++ +++   T ++L YLR+R
Sbjct: 2120 FM-KLKTLKIDGNPLKLIKRAVIEKGTVSILDYLRTR 2155


>gi|418728092|ref|ZP_13286672.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777137|gb|EKR57105.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 143/269 (53%), Gaps = 2/269 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L  ++R L  L +L++ +N+L+ LP  IG+L  L+ L +S+N +  
Sbjct: 116 NLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       +QL  LP  +G+  NL +   S+N +T LP+++     + + 
Sbjct: 176 LPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRF 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+LT+L    I     L EL    N L  +P+ IG L  L R  L  N+   +P  
Sbjct: 236 VLDNNQLTILPKE-IGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E Y+  N L+  P E+GKL KL TL+L +NQL     E  QL+ L  L+LS 
Sbjct: 295 IGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSE 354

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N L  +P EIG++  L+ L L  N L  L
Sbjct: 355 NQLKTIPQEIGQLQNLKSLDLRNNQLTIL 383



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 175/363 (48%), Gaps = 15/363 (4%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ LIL+   +  L ++++ L  L +L++ HN+L+ LP  IG+L  L+ L + +N + 
Sbjct: 46  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     ++NQL  LP+ + +  NL      NN +T LP+++     + +
Sbjct: 106 ALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQE 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L   ++ L  +P+ IG L  L  LDL  N++  +P 
Sbjct: 166 LYLSYNQLTTLPKE-IGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L  F + NN L+ LP E+GKL  L  L L  NQL     E  QL+ L    L 
Sbjct: 225 EIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLD 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN  + LP EIG++  L++L L+ N L T    +       L K     L  N+ +    
Sbjct: 285 NNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEI-----GKLQKLQTLNLWNNQLTTLPE 339

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
             E L  + T        L+L    L  IP EI +   +  LDL  N +  LP E+    
Sbjct: 340 EIEQLKNLKT--------LNLSENQLKTIPQEIGQLQNLKSLDLRNNQLTILPKEIGQLK 391

Query: 404 SLQ 406
           +LQ
Sbjct: 392 NLQ 394



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 148/305 (48%), Gaps = 38/305 (12%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           ++  +    L+L N  L  +P E+              +  +LQ+L L++N +  L +++
Sbjct: 134 IRQLKNLQMLDLGNNQLTILPKEI-------------GQLQNLQELYLSYNQLTTLPKEI 180

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L +L++  ++L+ LP  IG+L  L  LD+S N +  +P EIG    L +F   +N
Sbjct: 181 GKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNN 240

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL  LP  +G+  NL +    +N +T LP+++     + +  ++ N+ T+L         
Sbjct: 241 QLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTIL--------- 291

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
                          P+ IG L  L  L L  N++ + P  I     L    + NN L+ 
Sbjct: 292 ---------------PKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTT 336

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+ +L  L TL+L  NQLK    E  QL+ L  LDL NN L+ LP EIG++  L++L
Sbjct: 337 LPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLRNNQLTILPKEIGQLKNLQEL 396

Query: 304 LLTGN 308
            L  N
Sbjct: 397 YLNNN 401



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 73/172 (42%), Gaps = 37/172 (21%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           +    L+ LP E+ +L  L  LDL  NQL     E  QL+ L +L L  N L+ LP EIG
Sbjct: 53  LSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIG 112

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           ++  L+ L L  N L TL         P  ++ L++                        
Sbjct: 113 QLKNLKVLFLNNNQLTTL---------PTEIRQLKNL----------------------- 140

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
               + L L    L+ +P EI +   + +L LS N +  LP E+    +LQ+
Sbjct: 141 ----QMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQL 188


>gi|291234605|ref|XP_002737242.1| PREDICTED: leucine rich repeat containing 7-like [Saccoglossus
           kowalevskii]
          Length = 679

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 129/402 (32%), Positives = 199/402 (49%), Gaps = 38/402 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L+++P  VY+                L  L L  N I  + E+L NL  LT+L
Sbjct: 134 LDLRHNKLKEIPEVVYR-------------LTSLTTLFLRFNRISDVDEELSNLTNLTML 180

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LP  IG L  L + DVS N +  +P EIG+   L   D   N+L +LP SL
Sbjct: 181 SLRENKIRKLPQGIGNLTHLITFDVSHNHLEHLPSEIGNCEQLSSLDLQHNELLDLPDSL 240

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    LS      N + ++P+ L +C  M + +VE N ++ L   L++S   LT L  S+
Sbjct: 241 GNLRQLSRLGLRYNRLQAIPKSLCNCLDMEEFNVENNNISSLPEGLLSSLVNLTSLCLSR 300

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N  N  P  IG     + +  +++  N I  IP  I +    L +  M  N L+ALP ++
Sbjct: 301 NNFNSYP--IGGPTQFATVYSINMEHNHITKIPFGIFTRAKYLTKLNMKENQLTALPLDV 358

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G    +  L+L +NQL +   +   L  L VL LSNN L  LP  IG +  +R L L  N
Sbjct: 359 GSWMSMVELNLGTNQLSKLPEDIQALTSLEVLILSNNLLKKLPRGIGNLQKMRVLDLEEN 418

Query: 309 PLRTLRSSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            L +L         P+ + YL S  RL   + ++ ST   ++  + T      + LS+  
Sbjct: 419 KLESL---------PSEIAYLCSLQRLVL-QSNQLSTLPRNIGHLGTL-----QYLSVGE 463

Query: 367 MNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
            NL+++P EI     + +L L+ N ++  LP EL+ C+SLQ+
Sbjct: 464 NNLTSLPEEIGTLENLEQLYLNDNPNLHNLPFELALCSSLQI 505



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 37/215 (17%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           SK+ ++ +P +I  L++L+ L L+ NR+  +P+ I    +L +  +  N+L++LP  L +
Sbjct: 68  SKSCISVLPSSIKDLTQLVELYLYGNRLQYLPNEIGYLSNLQKLALSENSLTSLPVSLER 127

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  +  LDL  N+LKE      +L  L+ L L  N +S +  E+  +T L  L L  N +
Sbjct: 128 LKVIKVLDLRHNKLKEIPEVVYRLTSLTTLFLRFNRISDVDEELSNLTNLTMLSLRENKI 187

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           R L   + N                             +T      V+         +L 
Sbjct: 188 RKLPQGIGN-----------------------------LTHLITFDVSHN-------HLE 211

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            +PSEI    +++ LDL  N + +LP  L +   L
Sbjct: 212 HLPSEIGNCEQLSSLDLQHNELLDLPDSLGNLRQL 246


>gi|124002734|ref|ZP_01687586.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991962|gb|EAY31349.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 500

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 200/430 (46%), Gaps = 42/430 (9%)

Query: 12  GSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLT 71
           G  + S +   D+    Y N D+A +         +Q+L L+   ++K+ +++  L  L 
Sbjct: 6   GRFSASAQKKMDINRLFYSNLDQALQNKS-----KVQRLNLSSQKLKKIPQNIVLLKNLE 60

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            LN+ +N+L+  P  + +L  LK L +  N+I  +P  I S  +L   D   N L +LP 
Sbjct: 61  ELNLGNNQLTVFPKVLFQLKKLKILRLYNNNIKHLPQGIDSLKSLEVLDIQRNSLVDLPG 120

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL---------------- 175
            + R  NL+    +NN +  LPE++    KM   +  GN+L  L                
Sbjct: 121 KIVRLRNLTQLNIANNKVKELPENIGKLKKMRVFEAYGNQLKQLPASFSSLRKLESLGLG 180

Query: 176 SNNL----IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
            N L    +  +  L  L  S+N L  +P+ +GSL +L  L L QN +  +P  I     
Sbjct: 181 KNQLESVSLGKYKNLQSLDISRNRLTKIPDNLGSLKKLTSLFLQQNNLTKLPEKIGALSQ 240

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L   Y+  N +  LP EL  L +L  + L  NQL E   +  +L +L VL L +N L  L
Sbjct: 241 LRRLYLNENKIKQLPKELTSLVQLQVVKLEHNQLLELPNDIGKLSQLKVLSLHHNLLRAL 300

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK--YLR-----------SRLPENE 337
           P  IG +T L  L L+ N L  L SSL N    A LK  ++R           S+L + E
Sbjct: 301 PESIGNLTLLPTLQLSNNRLELLPSSLGNM---ASLKSIWVRKNNLQTLPKSISQLKKIE 357

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
              AS  +  L+ +        K L++ G  L+ IPSE+W   E+  LD SRN I  LP 
Sbjct: 358 RIYASQNQISLLPVELAELTQLKSLAISGNLLTEIPSELWGLEELYYLDASRNQITSLPN 417

Query: 398 ELSSCASLQV 407
           ++S   SL++
Sbjct: 418 KISDLRSLRI 427



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 147/291 (50%), Gaps = 8/291 (2%)

Query: 30  KNFDEAGEGDKWWEAV------DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSEL 83
           +  +  G G    E+V      +LQ L ++ N + K+ ++L +L  LT L +  N L++L
Sbjct: 172 RKLESLGLGKNQLESVSLGKYKNLQSLDISRNRLTKIPDNLGSLKKLTSLFLQQNNLTKL 231

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P  IG L  L+ L ++ N I ++P E+ S   L       NQL ELP+ +G+   L    
Sbjct: 232 PEKIGALSQLRRLYLNENKIKQLPKELTSLVQLQVVKLEHNQLLELPNDIGKLSQLKVLS 291

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
             +N + +LPE + + + +  L +  N+L +L ++L  +   L  +   KN L  +P++I
Sbjct: 292 LHHNLLRALPESIGNLTLLPTLQLSNNRLELLPSSL-GNMASLKSIWVRKNNLQTLPKSI 350

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
             L ++ R+   QN+I  +P  ++    L    +  N L+ +P+EL  L +L  LD   N
Sbjct: 351 SQLKKIERIYASQNQISLLPVELAELTQLKSLAISGNLLTEIPSELWGLEELYYLDASRN 410

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           Q+     +   LR L +L LS+N L  LP  I ++  LR+L L  N L  L
Sbjct: 411 QITSLPNKISDLRSLRILVLSHNRLRTLPFGITRLKNLRELYLDNNQLAKL 461



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 115/221 (52%), Gaps = 5/221 (2%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V LQ + L HN + +L  D+  L  L VL++ HN L  LP +IG L +L +L +S N + 
Sbjct: 262 VQLQVVKLEHNQLLELPNDIGKLSQLKVLSLHHNLLRALPESIGNLTLLPTLQLSNNRLE 321

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  +G+  +L       N L+ LP S+ +   +    AS N I+ LP +LA+ +++  
Sbjct: 322 LLPSSLGNMASLKSIWVRKNNLQTLPKSISQLKKIERIYASQNQISLLPVELAELTQLKS 381

Query: 165 LDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           L + GN LT + + L   W +  L  L AS+N +  +P  I  L  L  L L  NR+ ++
Sbjct: 382 LAISGNLLTEIPSEL---WGLEELYYLDASRNQITSLPNKISDLRSLRILVLSHNRLRTL 438

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           P  I+   +L E Y+ NN L+ LP  +G L  L    +  N
Sbjct: 439 PFGITRLKNLRELYLDNNQLAKLPPNMGALLNLKIFTMKRN 479



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 61/127 (48%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           ++++  + N I  L  +L  L  L  L +S N L+E+P+ +  L  L  LD S N I  +
Sbjct: 356 IERIYASQNQISLLPVELAELTQLKSLAISGNLLTEIPSELWGLEELYYLDASRNQITSL 415

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P++I    +L     S N+L+ LP  + R  NL +    NN +  LP ++     +    
Sbjct: 416 PNKISDLRSLRILVLSHNRLRTLPFGITRLKNLRELYLDNNQLAKLPPNMGALLNLKIFT 475

Query: 167 VEGNKLT 173
           ++ N  T
Sbjct: 476 MKRNGFT 482



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           S++ RL+L   ++  IP +I    +L E  +GNN L+  P  L +L KL  L L++N +K
Sbjct: 34  SKVQRLNLSSQKLKKIPQNIVLLKNLEELNLGNNQLTVFPKVLFQLKKLKILRLYNNNIK 93

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
                   L+ L VLD+  NSL  LP +I ++  L +L +  N ++ L  ++       +
Sbjct: 94  HLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRLRNLTQLNIANNKVKELPENIGKLKKMRV 153

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
            +   ++L +   S +S  K + + +            LE ++L        +   +  L
Sbjct: 154 FEAYGNQLKQLPASFSSLRKLESLGLGKN--------QLESVSLG-------KYKNLQSL 198

Query: 386 DLSRNSIQELPPELSSCASLQVKF 409
           D+SRN + ++P  L S   L   F
Sbjct: 199 DISRNRLTKIPDNLGSLKKLTSLF 222



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 55/109 (50%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L+ L ++ N + ++  +L  L  L  L+ S N+++ LP  I +L  L+ L +S N 
Sbjct: 375 ELTQLKSLAISGNLLTEIPSELWGLEELYYLDASRNQITSLPNKISDLRSLRILVLSHNR 434

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +  +P  I     L +    +NQL +LP ++G  LNL  F    N  T+
Sbjct: 435 LRTLPFGITRLKNLRELYLDNNQLAKLPPNMGALLNLKIFTMKRNGFTN 483



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 13/112 (11%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL +S   L ++P+E+             W   +L  L  + N I  L   + +L  L +
Sbjct: 381 SLAISGNLLTEIPSEL-------------WGLEELYYLDASRNQITSLPNKISDLRSLRI 427

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           L +SHN+L  LP  I  L  L+ L +  N + K+P  +G+   L  F    N
Sbjct: 428 LVLSHNRLRTLPFGITRLKNLRELYLDNNQLAKLPPNMGALLNLKIFTMKRN 479


>gi|347971997|ref|XP_313783.5| AGAP004485-PA [Anopheles gambiae str. PEST]
 gi|333469123|gb|EAA44595.5| AGAP004485-PA [Anopheles gambiae str. PEST]
          Length = 595

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 196/398 (49%), Gaps = 30/398 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L D+P+ +YK                L  L L  N I  + ++L+NL  LT+L
Sbjct: 188 LDLRHNKLSDIPDVIYK-------------LHTLTTLYLRFNRIRVVGDNLKNLSSLTML 234

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELPAAIG L  L +LD+S N +  +P+ IG+   L   D   N L ++P S+
Sbjct: 235 SLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDIPESI 294

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL       N +TS+P  L +C+ M + +VEGN ++ L + L+AS + LT +  S+
Sbjct: 295 GNLSNLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSR 354

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N  +  P       + +  ++L  N+I  I   I S    L +  M  NAL++LP ++G 
Sbjct: 355 NAFHSYPSGGPAQFTNVTSINLEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGT 414

Query: 252 LSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            +++  L+  +N L +   +  C   L +L LSNN L  +P  IG +  LR L L  N L
Sbjct: 415 WTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEENRL 474

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +L S +       LL  L+  + ++    A       +T  T LSV          NL 
Sbjct: 475 ESLPSEI------GLLHDLQKLILQSNQLSALPRTIGHLTNLTYLSVGEN-------NLQ 521

Query: 371 AIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
            +P EI     +  L ++ N S+ +LP EL+ C +L +
Sbjct: 522 FLPEEIGTLENLESLYINDNPSLIKLPYELALCQNLAI 559



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 154/341 (45%), Gaps = 52/341 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+HN+++ L E + N   LT L++ HN L ++P +IG L  L  L + +N + 
Sbjct: 252 VNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDIPESIGNLSNLMRLGLRYNQLT 311

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSL------------------------------- 133
            IP  + + T + +F+   N + +LP  L                               
Sbjct: 312 SIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNV 371

Query: 134 ------------------GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
                              R   L+      N +TSLP D+   ++M +L+   N LT L
Sbjct: 372 TSINLEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKL 431

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
            ++ I     L  LI S NLL  +P TIG+L +L  LDL +NR+ S+PS I     L + 
Sbjct: 432 PDD-IHCLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKL 490

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN-SLSGLPPE 293
            + +N LSALP  +G L+ L  L +  N L+    E   L  L  L +++N SL  LP E
Sbjct: 491 ILQSNQLSALPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESLYINDNPSLIKLPYE 550

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +     L  + +   PL  L   +V+G    +++YL+   P
Sbjct: 551 LALCQNLAIMSIENCPLSALPPEVVSGGPSLVIQYLKLHSP 591



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 27/229 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S +SI  IP  +   T+LV+F    N++  LP  +G   NL     + N +TSL
Sbjct: 116 IQRLDLSKSSITVIPASVKDCTSLVEFYLYGNKISSLPPEIGCLANLKTLALNENSLTSL 175

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+ L +  ++  LD+  NKL+                         +P+ I  L  L  L
Sbjct: 176 PDSLQNLKQLKVLDLRHNKLS------------------------DIPDVIYKLHTLTTL 211

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CV 270
            L  NRI  +  ++    SL    +  N +  LPA +G L  L TLDL  N LK     +
Sbjct: 212 YLRFNRIRVVGDNLKNLSSLTMLSLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPEAI 271

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             C + L+ LDL +N L  +P  IG ++ L +L L  N L ++  SL N
Sbjct: 272 GNC-VNLTALDLQHNDLLDIPESIGNLSNLMRLGLRYNQLTSIPVSLKN 319


>gi|421090942|ref|ZP_15551731.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000269|gb|EKO50914.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/266 (34%), Positives = 142/266 (53%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L++N ++ L +++R L  L  L +  N+L+ LP  IG+L  L+ L +  N +M 
Sbjct: 116 NLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L   + S NQ+K +P  + +   L      NN +T+LP ++    K+ +L
Sbjct: 176 LPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQEL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L N  I     L +L    N L  +P  IG L  L  L L  NR+ ++   
Sbjct: 236 SLSTNRLTTLPNE-IGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + NN L+  P E+ +L  L  LDL SNQL     E  QL+ L V +L+N
Sbjct: 295 IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNN 354

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP EIG++  L++L L  N L
Sbjct: 355 NQLTTLPKEIGQLQNLQELYLIDNQL 380



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 161/311 (51%), Gaps = 12/311 (3%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     K   +  +L+ L L HN ++ L E+
Sbjct: 51  LDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPEE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +S+N+L  LP  I +L  L+ L +  N +  +P EIG    L +    +
Sbjct: 111 IEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL   + S N I ++P+++    K+  L +  N+LT L N  I   
Sbjct: 171 NQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNE-IGQL 229

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL  S N L  +P  IG L  L  L L  N++  +P+ I    +L   Y+ +N L+
Sbjct: 230 QKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLT 289

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            L  ++ +L  L +LDL +NQL  +  E  QL+ L VLDL +N L+ LP EIG++  L+ 
Sbjct: 290 TLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQV 349

Query: 303 LLLTGNPLRTL 313
             L  N L TL
Sbjct: 350 FELNNNQLTTL 360



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 153/337 (45%), Gaps = 38/337 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG L  L+ L +S+N +  +P EIG    L   +   NQLK LP 
Sbjct: 50  VLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPE 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL     S N + +LP+++     + +L +  N+LT L    I     L  L  
Sbjct: 110 EIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTE-IGQLKNLQRLHL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +PE IG L  L  L+L  N+I +IP  I     L    +GNN L+ALP E+G+
Sbjct: 169 WNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQ 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L +N+L     E  QL+ L  L L +N L+ LP EIG++  L+ L L  N L
Sbjct: 229 LQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL   +                            E L  +        K L L    L+
Sbjct: 289 TTLSKDI----------------------------EQLQNL--------KSLDLWNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             P EI +   +  LDL  N +  LP E+    +LQV
Sbjct: 313 TFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQV 349



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 130/309 (42%), Gaps = 61/309 (19%)

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           + M + + I +   +   D S  +LK LP  +GR  NL +   S N + +LP+++     
Sbjct: 34  TYMDLTEAIQNPLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQN 93

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L++  N+L  L                        PE I  L  L RL L  N++ +
Sbjct: 94  LRVLELIHNQLKTL------------------------PEEIEQLKNLQRLYLSYNQLKT 129

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P  I    +L E Y+ +N L+ LP E+G+L  L  L L +NQL     E  QL+ L VL
Sbjct: 130 LPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVL 189

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           +LS N +  +P EI K+  L+ L L  N L  L + +  G    L               
Sbjct: 190 ELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEI--GQLQKL--------------- 232

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                              +ELSL    L+ +P+EI +   +  L L  N +  LP E+ 
Sbjct: 233 -------------------QELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIG 273

Query: 401 SCASLQVKF 409
              +LQ  +
Sbjct: 274 QLKNLQTLY 282



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 13/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+LS   L  +PNE+              +  +LQ L L  N +  L  ++  L  L  
Sbjct: 234 ELSLSTNRLTTLPNEI-------------GQLQNLQDLYLGSNQLTILPNEIGQLKNLQT 280

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ L   I +L  LKSLD+  N +   P EI     L   D  SNQL  LP  
Sbjct: 281 LYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKE 340

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           +G+  NL  F+ +NN +T+LP+++     + +L +  N+L+
Sbjct: 341 IGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLS 381


>gi|300868028|ref|ZP_07112666.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
 gi|300333948|emb|CBN57844.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
          Length = 376

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 177/366 (48%), Gaps = 59/366 (16%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
            LQ+L L  N + K+ E + +L  L +LN+S+NKL+E+P AI  L  L++L++ +N + +
Sbjct: 44  QLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLTEVPEAIASLSQLQTLNLIYNKLTE 103

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+ I + T L K   S+NQL ++P ++     L     + N +T +PE +A  S++ +L
Sbjct: 104 VPEAIATLTQLQKLYLSNNQLTQVPEAIASLSQLQTLNLNFNQLTEVPEAIASLSQLRRL 163

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT +    IAS T L  L  + N L  +PE I SL++L RL L  N + ++P +
Sbjct: 164 NLSYNQLTEVPET-IASLTQLEWLYLNNNQLRKVPEAIASLTQLQRLSLSDNELTAVPEA 222

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I+    L    + NN L+ LP  +  L++L  L L  NQL E                  
Sbjct: 223 IASLSQLRSLNLSNNQLTELPEAIASLTQLQELYLVGNQLTE------------------ 264

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
               LP  I  +T L++L L GN L  +  ++ +                          
Sbjct: 265 ----LPEAIASLTQLQELYLVGNELTAVPEAIAS-------------------------- 294

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              +T   RLS++  E       L+A+P  I     +  LDLS N + ++P  ++S + L
Sbjct: 295 ---LTQLQRLSLSDNE-------LTAVPEAIASLTHLQGLDLSYNQLTQVPEAIASLSQL 344

Query: 406 QVKFSD 411
           Q  + D
Sbjct: 345 QELYLD 350



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 156/309 (50%), Gaps = 37/309 (11%)

Query: 14  LNLSNRSLRDVP------------NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           LNLSN  L +VP            N +Y    E  E         LQKL L++N + ++ 
Sbjct: 71  LNLSNNKLTEVPEAIASLSQLQTLNLIYNKLTEVPEAIATL--TQLQKLYLSNNQLTQVP 128

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           E + +L  L  LN++ N+L+E+P AI  L  L+ L++S+N + ++P+ I S T L     
Sbjct: 129 EAIASLSQLQTLNLNFNQLTEVPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYL 188

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           ++NQL+++P ++     L     S+N +T++PE +A  S++  L++  N+LT L    IA
Sbjct: 189 NNNQLRKVPEAIASLTQLQRLSLSDNELTAVPEAIASLSQLRSLNLSNNQLTELPEA-IA 247

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           S T L EL    N L  +PE I SL++L  L L  N + ++P +I+    L    + +N 
Sbjct: 248 SLTQLQELYLVGNQLTELPEAIASLTQLQELYLVGNELTAVPEAIASLTQLQRLSLSDNE 307

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L+A+P  +  L+ L  LDL  NQL +                      +P  I  ++ L+
Sbjct: 308 LTAVPEAIASLTHLQGLDLSYNQLTQ----------------------VPEAIASLSQLQ 345

Query: 302 KLLLTGNPL 310
           +L L  NPL
Sbjct: 346 ELYLDDNPL 354



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 13/135 (9%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNLSN  L ++P  +                  LQ+L L  N + +L E + +L  L  
Sbjct: 231 SLNLSNNQLTELPEAIAS-------------LTQLQELYLVGNQLTELPEAIASLTQLQE 277

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ +P AI  L  L+ L +S N +  +P+ I S T L   D S NQL ++P +
Sbjct: 278 LYLVGNELTAVPEAIASLTQLQRLSLSDNELTAVPEAIASLTHLQGLDLSYNQLTQVPEA 337

Query: 133 LGRCLNLSDFKASNN 147
           +     L +    +N
Sbjct: 338 IASLSQLQELYLDDN 352


>gi|348524990|ref|XP_003450005.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oreochromis
           niloticus]
          Length = 570

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 203/405 (50%), Gaps = 44/405 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P  VY+                L  L L  N I  +++D+RNL  LT+L
Sbjct: 162 LDLRHNKLREIPPVVYR-------------LTSLTTLYLRFNRITTVEKDIRNLSKLTML 208

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG  T +   D   N+L +LP ++
Sbjct: 209 SIRENKIKQLPAEIGELCSLITLDVAHNQLEHLPKEIGHCTQITNLDLQHNELLDLPETI 268

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +++      N ++++P  LA C ++ +L++E N ++VL   L++S   LT L  ++
Sbjct: 269 GNLASINRLGLRYNRLSAIPRSLAQCRELEELNLENNNISVLPEGLLSSLVNLTSLTLAR 328

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L+ALP + 
Sbjct: 329 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDF 386

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   + C L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 387 GTWTSMVELNLATNQLTKIPEDICGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 446

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR-----LSVTSKELS 363
            L  L         P  + YL+       D +      + +TM  R     L++T   L 
Sbjct: 447 KLECL---------PNEIAYLK-------DLQKLVLTNNQLTMLPRGIGHLLNLT--HLG 488

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L    L  +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 489 LGENQLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 533



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 161/361 (44%), Gaps = 37/361 (10%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           +L L+  +I  L   ++ L  LT L +  NKL  LPA +G L  L +L +S NS+  +PD
Sbjct: 92  RLDLSKRSIHTLPTSIKELTQLTELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPD 151

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            + S   L   D   N+L+E+P  + R  +L+      N IT++ +D+ + SK++ L + 
Sbjct: 152 SLDSLKKLRMLDLRHNKLREIPPVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIR 211

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            NK+  L                        P  IG L  LI LD+  N++  +P  I  
Sbjct: 212 ENKIKQL------------------------PAEIGELCSLITLDVAHNQLEHLPKEIGH 247

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 288
           C  +    + +N L  LP  +G L+ +  L L  N+L        Q R        N+  
Sbjct: 248 CTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAQCRELEELNLENNNI 307

Query: 289 GLPPE--IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
            + PE  +  +  L  L L  N     +S  V GP+     Y       + + E +   +
Sbjct: 308 SVLPEGLLSSLVNLTSLTLARN---CFQSYPVGGPSQFSTIY-------SLNMEHNRINK 357

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
               + +R  V SK L+++   L+A+P +      + +L+L+ N + ++P ++   ASL+
Sbjct: 358 IPFGIFSRAKVLSK-LNMKDNQLTALPLDFGTWTSMVELNLATNQLTKIPEDICGLASLE 416

Query: 407 V 407
           V
Sbjct: 417 V 417



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 121/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 348 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDFGTWTSMVELNLATNQLTKIPE 407

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +    +L     SNN +  LP  + +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 408 DICGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNE-IAYLKDLQKLVL 466

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L  L  L L +N++  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 467 TNNQLTMLPRGIGHLLNLTHLGLGENQLQHLPEEIGTLENLEELYLNDNPNLHSLPFELA 526

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  L+ LPP+I  G  + + + L    
Sbjct: 527 LCSKL----------------------SIMSIENCPLTHLPPQIVAGGPSFIIQFLKMQG 564

Query: 309 PLRTL 313
           P R +
Sbjct: 565 PYRAM 569



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 362 IFSRAKVLSKLNMKDNQLTALPLDF----------GTWTSMVELN---LATNQLTKIPED 408

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 409 ICGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTN 468

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G  LNL+      N +  LPE+                        LA C
Sbjct: 469 NQLTMLPRGIGHLLNLTHLGLGENQLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 528

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   LT L   ++A 
Sbjct: 529 SKLSIMSIENCPLTHLPPQIVAG 551


>gi|324500178|gb|ADY40092.1| Protein lap1 [Ascaris suum]
          Length = 1428

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 17/302 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    + D+P E+              E   L+ L L+ N I +L   +  L  +T L
Sbjct: 88  LNLKGNDVSDLPEEIK-------------ECTQLKILDLSSNPITRLPPTITLLTSMTHL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+++P  IG L  L+SL+V  N +  IP  I   T L + D   N+L +LPS +
Sbjct: 135 GLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEI 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL +     N + +LPE +  C  + +LDV  NKL VL ++ I     L +L  S 
Sbjct: 195 GLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDD-IGDLEQLNDLTVSH 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P ++G L +L  L + +N I  +  ++  C +L+E Y+  N L+ +P  LG L 
Sbjct: 254 NCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLK 313

Query: 254 KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            L TL+L  NQLKE    +  C + LSVL L +N L  LP EIG++  LR L +  N L 
Sbjct: 314 ALRTLNLDKNQLKEIPSTIGGC-ISLSVLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLN 372

Query: 312 TL 313
            L
Sbjct: 373 FL 374



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 181/378 (47%), Gaps = 29/378 (7%)

Query: 21  LRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL 80
           L+ VPN++ +N            A  L++  L  N+I+ L++ L     L  L++S N++
Sbjct: 25  LQSVPNDIDRN------------ARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEI 72

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
             +P  I  L  L+ L++  N +  +P+EI   T L   D SSN +  LP ++    +++
Sbjct: 73  IRVPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMT 132

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               ++  +T +P D+     +  L+V  N L  +  + I+  T L  L    N L+ +P
Sbjct: 133 HLGLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPS-ISQLTQLQRLDLGHNELDDLP 191

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             IG LS L  L + QN + ++P SI  C SL +  +  N L  LP ++G L +L  L +
Sbjct: 192 SEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTV 251

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             N L+        L+ L++L +  N+++ L P +G  T L +L LT N L  + +SL N
Sbjct: 252 SHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGN 311

Query: 320 GPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                 LK LR+  L +N+  E  +T    I+++         LSL    L  +P EI  
Sbjct: 312 ------LKALRTLNLDKNQLKEIPSTIGGCISLSV--------LSLRDNLLEQLPLEIGR 357

Query: 379 AGEITKLDLSRNSIQELP 396
              +  LD+  N +  LP
Sbjct: 358 LENLRVLDVCNNRLNFLP 375



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 139/287 (48%), Gaps = 15/287 (5%)

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S N++  +P+ +   + L +     N ++ LPE++ +C+++  LD+  N +T L    I 
Sbjct: 68  SENEIIRVPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPT-IT 126

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
             T +T L  +   L  MP  IG L  L  L++ +N + +IP SIS    L    +G+N 
Sbjct: 127 LLTSMTHLGLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNE 186

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L  LP+E+G LS L  L +  N L+       Q R L  LD+S N L  LP +IG +  L
Sbjct: 187 LDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQL 246

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
             L ++ N L+ L +S+ +    A+LK          D  A T     +   T LS    
Sbjct: 247 NDLTVSHNCLQVLPTSVGHLKKLAILKV---------DRNAITQLTPAVGSCTALS---- 293

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           EL L    L+ +P+ +     +  L+L +N ++E+P  +  C SL V
Sbjct: 294 ELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSV 340



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 1/200 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L +  N++E L E +     L  L+VS NKL  LP  IG+L  L  L VS N +  
Sbjct: 199 NLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHNCLQV 258

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  +G    L       N + +L  ++G C  LS+   + N +T +P  L +   +  L
Sbjct: 259 LPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTL 318

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ N+L  + +  I     L+ L    NLL  +P  IG L  L  LD+  NR+  +P +
Sbjct: 319 NLDKNQLKEIPST-IGGCISLSVLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLNFLPFT 377

Query: 226 ISGCCSLAEFYMGNNALSAL 245
           I+   +L   ++  +   A+
Sbjct: 378 INVLFNLQALWLSESQSQAM 397



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 14/246 (5%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++  LD     L  + N++  +   L E     N +  + + +    +L  L L +N I+
Sbjct: 14  QIDVLDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEII 73

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
            +P+ I+    L E  +  N +S LP E+ + ++L  LDL SN +         L  ++ 
Sbjct: 74  RVPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTH 133

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L++ SL+ +P +IG +  LR L +  N LRT+  S+       L +  R  L  NE  
Sbjct: 134 LGLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQ-----LTQLQRLDLGHNE-- 186

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                 +DL +    LS   +EL ++  +L A+P  I +   + +LD+S N +  LP ++
Sbjct: 187 -----LDDLPSEIGLLS-NLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDI 240

Query: 400 SSCASL 405
                L
Sbjct: 241 GDLEQL 246



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 19/204 (9%)

Query: 212 LDLHQNRILSIPSSIS-GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           LD  Q  + S+P+ I     +L E Y+  N +  L   L +  KL TL L  N++     
Sbjct: 18  LDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEIIRVPT 77

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +   L  L  L+L  N +S LP EI + T L+ L L+ NP+  L       PT  LL  +
Sbjct: 78  DIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRL------PPTITLLTSM 131

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN--LSAIPSEIWEAGEITKLDL 387
            + L  N+ S        L  M   +       SLE     L  IP  I +  ++ +LDL
Sbjct: 132 -THLGLNDIS--------LTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDL 182

Query: 388 SRNSIQELPPELSSCASLQVKFSD 411
             N + +LP E+   ++LQ  + D
Sbjct: 183 GHNELDDLPSEIGLLSNLQELYVD 206


>gi|148225142|ref|NP_001080350.1| leucine-rich repeat protein SHOC-2 [Xenopus laevis]
 gi|82242622|sp|Q8AVI4.1|SHOC2_XENLA RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|27503220|gb|AAH42263.1| Shoc2-prov protein [Xenopus laevis]
          Length = 577

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 202/400 (50%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P  VY+                L  L L  N I  +++DL+ LP LT+L
Sbjct: 169 LDLRHNKLREIPPVVYR-------------LSSLTTLFLRFNRITAVEKDLKMLPKLTML 215

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+  LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 216 SIRENKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 275

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  L+ CS++ +L++E N ++ L   L++S   +  L  ++
Sbjct: 276 GNLSSLSRLGLRYNRLSAVPRSLSKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLAR 335

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 336 NCFQSYP--VGGPSQFSSIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 393

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  + VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 394 GTWTSMVELNLATNQLTKIPEDVSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 453

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 454 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 500

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 501 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 540



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 355 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 414

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   +++     SNN +  LP  + +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 415 DVSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 473

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 474 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 533

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 534 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 571

Query: 309 PLRTL 313
           P R +
Sbjct: 572 PYRAM 576



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 160/341 (46%), Gaps = 18/341 (5%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L+++   +  LP +I +L  +  L +  N +  +P E+G+   LVK   S N L  LP
Sbjct: 98  TRLDLAKKSIHMLPVSIKDLTQITELYLYGNKLQSLPAEVGNLVNLVKLALSENSLTSLP 157

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
            SL     L      +N +  +P  +   S ++ L +  N++T +  +L      LT L 
Sbjct: 158 DSLDNLKKLCMLDLRHNKLREIPPVVYRLSSLTTLFLRFNRITAVEKDL-KMLPKLTMLS 216

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +N +  +P  IG L  LI LD+  N++  +P  I  C  +    + +N L  LP  +G
Sbjct: 217 IRENKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 276

Query: 251 KLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            LS L  L L  N+L      +  C   L  L+L NN++S LP   G +++L K+    N
Sbjct: 277 NLSSLSRLGLRYNRLSAVPRSLSKCS-ELDELNLENNNISTLPE--GLLSSLVKV----N 329

Query: 309 PLRTLRSSLVNGPT--PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            L   R+   + P   P+    + S      + E +   +    + +R  V SK L+++ 
Sbjct: 330 SLTLARNCFQSYPVGGPSQFSSIYSL-----NMEHNRINKIPFGIFSRAKVLSK-LNMKD 383

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             L+++P +      + +L+L+ N + ++P ++S   S++V
Sbjct: 384 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSIEV 424



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 369 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 415

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  + VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 416 VSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 475

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 476 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 535

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 536 SKLSIMSIENCPLSHLPPQIVA 557


>gi|418678197|ref|ZP_13239471.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418686545|ref|ZP_13247711.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418740868|ref|ZP_13297244.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400321387|gb|EJO69247.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410738978|gb|EKQ83710.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410751463|gb|EKR08440.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/266 (34%), Positives = 142/266 (53%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L++N ++ L +++R L  L  L +  N+L+ LP  IG+L  L+ L +  N +M 
Sbjct: 116 NLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L   + S NQ+K +P  + +   L      NN +T+LP ++    K+ +L
Sbjct: 176 LPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQEL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L N  I     L +L    N L  +P  IG L  L  L L  NR+ ++   
Sbjct: 236 SLSTNRLTTLPNE-IGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + NN L+  P E+ +L  L  LDL SNQL     E  QL+ L V +L+N
Sbjct: 295 IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNN 354

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP EIG++  L++L L  N L
Sbjct: 355 NQLTTLPNEIGQLQNLQELYLIDNQL 380



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 161/311 (51%), Gaps = 12/311 (3%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     K   +  +L+ L L HN ++ L E+
Sbjct: 51  LDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPEE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +S+N+L  LP  I +L  L+ L +  N +  +P EIG    L +    +
Sbjct: 111 IEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL   + S N I ++P+++    K+  L +  N+LT L N  I   
Sbjct: 171 NQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNE-IGQL 229

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL  S N L  +P  IG L  L  L L  N++  +P+ I    +L   Y+ +N L+
Sbjct: 230 QKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLT 289

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            L  ++ +L  L +LDL +NQL  +  E  QL+ L VLDL +N L+ LP EIG++  L+ 
Sbjct: 290 TLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQV 349

Query: 303 LLLTGNPLRTL 313
             L  N L TL
Sbjct: 350 FELNNNQLTTL 360



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 153/337 (45%), Gaps = 38/337 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG L  L+ L +S+N +  +P EIG    L   +   NQLK LP 
Sbjct: 50  VLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPE 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL     S N + +LP+++     + +L +  N+LT L    I     L  L  
Sbjct: 110 EIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTE-IGQLKNLQRLHL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +PE IG L  L  L+L  N+I +IP  I     L    +GNN L+ALP E+G+
Sbjct: 169 WNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQ 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L +N+L     E  QL+ L  L L +N L+ LP EIG++  L+ L L  N L
Sbjct: 229 LQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL   +                            E L  +        K L L    L+
Sbjct: 289 TTLSKDI----------------------------EQLQNL--------KSLDLWNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             P EI +   +  LDL  N +  LP E+    +LQV
Sbjct: 313 TFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQV 349



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 130/309 (42%), Gaps = 61/309 (19%)

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           + M + + I +   +   D S  +LK LP  +GR  NL +   S N + +LP+++     
Sbjct: 34  TYMDLTEAIQNPLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQN 93

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L++  N+L  L                        PE I  L  L RL L  N++ +
Sbjct: 94  LRVLELIHNQLKTL------------------------PEEIEQLKNLQRLYLSYNQLKT 129

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P  I    +L E Y+ +N L+ LP E+G+L  L  L L +NQL     E  QL+ L VL
Sbjct: 130 LPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVL 189

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           +LS N +  +P EI K+  L+ L L  N L  L + +  G    L               
Sbjct: 190 ELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEI--GQLQKL--------------- 232

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                              +ELSL    L+ +P+EI +   +  L L  N +  LP E+ 
Sbjct: 233 -------------------QELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIG 273

Query: 401 SCASLQVKF 409
              +LQ  +
Sbjct: 274 QLKNLQTLY 282



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 13/161 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+LS   L  +PNE+              +  +LQ L L  N +  L  ++  L  L  
Sbjct: 234 ELSLSTNRLTTLPNEI-------------GQLQNLQDLYLGSNQLTILPNEIGQLKNLQT 280

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ L   I +L  LKSLD+  N +   P EI     L   D  SNQL  LP  
Sbjct: 281 LYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKE 340

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           +G+  NL  F+ +NN +T+LP ++     + +L +  N+L+
Sbjct: 341 IGQLKNLQVFELNNNQLTTLPNEIGQLQNLQELYLIDNQLS 381


>gi|324501497|gb|ADY40666.1| Protein lap1 [Ascaris suum]
          Length = 1224

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/302 (34%), Positives = 154/302 (50%), Gaps = 17/302 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    + D+P E+              E   L+ L L+ N I +L   +  L  +T L
Sbjct: 88  LNLKGNDVSDLPEEIK-------------ECTQLKILDLSSNPITRLPPTITLLTSMTHL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+++P  IG L  L+SL+V  N +  IP  I   T L + D   N+L +LPS +
Sbjct: 135 GLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEI 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL +     N + +LPE +  C  + +LDV  NKL VL ++ I     L +L  S 
Sbjct: 195 GLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDD-IGDLEQLNDLTVSH 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P ++G L +L  L + +N I  +  ++  C +L+E Y+  N L+ +P  LG L 
Sbjct: 254 NCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLK 313

Query: 254 KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            L TL+L  NQLKE    +  C + LSVL L +N L  LP EIG++  LR L +  N L 
Sbjct: 314 ALRTLNLDKNQLKEIPSTIGGC-ISLSVLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLN 372

Query: 312 TL 313
            L
Sbjct: 373 FL 374



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 181/378 (47%), Gaps = 29/378 (7%)

Query: 21  LRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL 80
           L+ VPN++ +N            A  L++  L  N+I+ L++ L     L  L++S N++
Sbjct: 25  LQSVPNDIDRN------------ARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEI 72

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
             +P  I  L  L+ L++  N +  +P+EI   T L   D SSN +  LP ++    +++
Sbjct: 73  IRVPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMT 132

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               ++  +T +P D+     +  L+V  N L  +  + I+  T L  L    N L+ +P
Sbjct: 133 HLGLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPS-ISQLTQLQRLDLGHNELDDLP 191

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             IG LS L  L + QN + ++P SI  C SL +  +  N L  LP ++G L +L  L +
Sbjct: 192 SEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTV 251

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             N L+        L+ L++L +  N+++ L P +G  T L +L LT N L  + +SL N
Sbjct: 252 SHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGN 311

Query: 320 GPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                 LK LR+  L +N+  E  +T    I+++         LSL    L  +P EI  
Sbjct: 312 ------LKALRTLNLDKNQLKEIPSTIGGCISLSV--------LSLRDNLLEQLPLEIGR 357

Query: 379 AGEITKLDLSRNSIQELP 396
              +  LD+  N +  LP
Sbjct: 358 LENLRVLDVCNNRLNFLP 375



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 139/287 (48%), Gaps = 15/287 (5%)

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S N++  +P+ +   + L +     N ++ LPE++ +C+++  LD+  N +T L    I 
Sbjct: 68  SENEIIRVPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPT-IT 126

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
             T +T L  +   L  MP  IG L  L  L++ +N + +IP SIS    L    +G+N 
Sbjct: 127 LLTSMTHLGLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNE 186

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L  LP+E+G LS L  L +  N L+       Q R L  LD+S N L  LP +IG +  L
Sbjct: 187 LDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQL 246

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
             L ++ N L+ L +S+ +    A+LK          D  A T     +   T LS    
Sbjct: 247 NDLTVSHNCLQVLPTSVGHLKKLAILKV---------DRNAITQLTPAVGSCTALS---- 293

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           EL L    L+ +P+ +     +  L+L +N ++E+P  +  C SL V
Sbjct: 294 ELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSV 340



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 1/200 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L +  N++E L E +     L  L+VS NKL  LP  IG+L  L  L VS N +  
Sbjct: 199 NLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHNCLQV 258

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  +G    L       N + +L  ++G C  LS+   + N +T +P  L +   +  L
Sbjct: 259 LPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTL 318

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ N+L  + +  I     L+ L    NLL  +P  IG L  L  LD+  NR+  +P +
Sbjct: 319 NLDKNQLKEIPST-IGGCISLSVLSLRDNLLEQLPLEIGRLENLRVLDVCNNRLNFLPFT 377

Query: 226 ISGCCSLAEFYMGNNALSAL 245
           I+   +L   ++  +   A+
Sbjct: 378 INVLFNLQALWLSESQSQAM 397



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 14/246 (5%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++  LD     L  + N++  +   L E     N +  + + +    +L  L L +N I+
Sbjct: 14  QIDVLDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEII 73

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
            +P+ I+    L E  +  N +S LP E+ + ++L  LDL SN +         L  ++ 
Sbjct: 74  RVPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTH 133

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L++ SL+ +P +IG +  LR L +  N LRT+  S+       L +  R  L  NE  
Sbjct: 134 LGLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQ-----LTQLQRLDLGHNE-- 186

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                 +DL +    LS   +EL ++  +L A+P  I +   + +LD+S N +  LP ++
Sbjct: 187 -----LDDLPSEIGLLS-NLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDI 240

Query: 400 SSCASL 405
                L
Sbjct: 241 GDLEQL 246



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 19/204 (9%)

Query: 212 LDLHQNRILSIPSSIS-GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           LD  Q  + S+P+ I     +L E Y+  N +  L   L +  KL TL L  N++     
Sbjct: 18  LDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEIIRVPT 77

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +   L  L  L+L  N +S LP EI + T L+ L L+ NP+  L       PT  LL  +
Sbjct: 78  DIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRL------PPTITLLTSM 131

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN--LSAIPSEIWEAGEITKLDL 387
            + L  N+ S        L  M   +       SLE     L  IP  I +  ++ +LDL
Sbjct: 132 -THLGLNDIS--------LTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDL 182

Query: 388 SRNSIQELPPELSSCASLQVKFSD 411
             N + +LP E+   ++LQ  + D
Sbjct: 183 GHNELDDLPSEIGLLSNLQELYVD 206


>gi|359683881|ref|ZP_09253882.1| lipoprotein [Leptospira santarosai str. 2000030832]
          Length = 440

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 188/406 (46%), Gaps = 45/406 (11%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY++F+EA +      A+D++ L L  N +  L +++  L  L  LN+ +N+ + LP 
Sbjct: 24  NKVYRDFNEALKN-----AMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQ 78

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF-----------------------DCS 122
            IG L  L+SL +  N +  +P EIG    L +                        D  
Sbjct: 79  EIGTLQNLQSLSLESNRLEGLPKEIGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDLI 138

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N+L+ LP  +G+  NL      +N +T+LP+++     +  L + GN+LT+L    I +
Sbjct: 139 YNRLESLPKEIGQLQNLKRLYLVDNHLTTLPQEIWQLENLQTLSISGNQLTILPKE-IGT 197

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L  S   L   P+ IG+L  L  L L  NR+ + P  I    +L E Y+ +  L
Sbjct: 198 LQKLEDLNLSG--LAVFPQEIGTLQNLKGLYLSNNRLTTFPQEIGTLQNLKELYLSSTQL 255

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G+L KL  L L S QL     E  QL+ L +LDLS+N  +  P EIGK+  L 
Sbjct: 256 TTFPKEIGQLQKLEELYLPSTQLVTLSQEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLE 315

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N L TL   +       LL    +RL        +T  E+++ +    ++  + 
Sbjct: 316 YLFLEHNRLTTLPKEIGTLQRLKLLNLYNNRL--------TTLSEEIVGLQNLKNLNLRN 367

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
                  L+ +P EI +   +  LDLS N     P E+     LQ+
Sbjct: 368 NR-----LTVLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLQI 408



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 127/264 (48%), Gaps = 9/264 (3%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W+  +LQ L ++ N +  L +++  L  L  LN+S   L+  P  IG L  LK L +S N
Sbjct: 173 WQLENLQTLSISGNQLTILPKEIGTLQKLEDLNLSG--LAVFPQEIGTLQNLKGLYLSNN 230

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +   P EIG+   L +   SS QL   P  +G+   L +    +  + +L +++     
Sbjct: 231 RLTTFPQEIGTLQNLKELYLSSTQLTTFPKEIGQLQKLEELYLPSTQLVTLSQEIGQLQN 290

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  LD+  N+ T      I     L  L    N L  +P+ IG+L RL  L+L+ NR+ +
Sbjct: 291 LKLLDLSDNQFTTFPKE-IGKLRKLEYLFLEHNRLTTLPKEIGTLQRLKLLNLYNNRLTT 349

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +   I G  +L    + NN L+ LP E+G+L  L  LDL  N    +  E   L+ L +L
Sbjct: 350 LSEEIVGLQNLKNLNLRNNRLTVLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLQIL 409

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLL 304
            L N     +P  + K  T+RKLL
Sbjct: 410 RLEN-----IPALLSKKETIRKLL 428



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 125/289 (43%), Gaps = 19/289 (6%)

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           SNQL  LP  +GR   L +    NN  T+LP+++     +  L +E N+L  L    I  
Sbjct: 47  SNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNRLEGLPKE-IGR 105

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L    N L  +P+ IG L  L  LDL  NR+ S+P  I    +L   Y+ +N L
Sbjct: 106 LQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLVDNHL 165

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           + LP E+ +L  L TL +  NQL     E   L+  + DL+ + L+  P EIG +  L+ 
Sbjct: 166 TTLPQEIWQLENLQTLSISGNQLTILPKEIGTLQ-KLEDLNLSGLAVFPQEIGTLQNLKG 224

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK-- 360
           L L+ N L T    +        L+ L+         E   +   L T    +    K  
Sbjct: 225 LYLSNNRLTTFPQEI------GTLQNLK---------ELYLSSTQLTTFPKEIGQLQKLE 269

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           EL L    L  +  EI +   +  LDLS N     P E+     L+  F
Sbjct: 270 ELYLPSTQLVTLSQEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLF 318



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 129/288 (44%), Gaps = 27/288 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N +E L +++  L  L  L +  N L+ LP  I +L  L++L +S N +  
Sbjct: 131 NLQNLDLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTLPQEIWQLENLQTLSISGNQLTI 190

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L   + S   L   P  +G   NL     SNN +T+ P+++     + +L
Sbjct: 191 LPKEIGTLQKLEDLNLSG--LAVFPQEIGTLQNLKGLYLSNNRLTTFPQEIGTLQNLKEL 248

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +   +LT      I     L EL      L  + + IG L  L  LDL  N+  + P  
Sbjct: 249 YLSSTQLTTFPKE-IGQLQKLEELYLPSTQLVTLSQEIGQLQNLKLLDLSDNQFTTFPKE 307

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK---EYCV------------ 270
           I     L   ++ +N L+ LP E+G L +L  L+L++N+L    E  V            
Sbjct: 308 IGKLRKLEYLFLEHNRLTTLPKEIGTLQRLKLLNLYNNRLTTLSEEIVGLQNLKNLNLRN 367

Query: 271 --------EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
                   E  QL+ L  LDLS N  +  P EI  +  L+ L L   P
Sbjct: 368 NRLTVLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLQILRLENIP 415



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 111/254 (43%), Gaps = 36/254 (14%)

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           K D E NK+    N  + +   +  L    N L  +P+ IG L +L  L+L  N+  ++P
Sbjct: 18  KRDAEKNKVYRDFNEALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALP 77

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
             I    +L    + +N L  LP E+G+L  L  L L +N L     E   L+ L  LDL
Sbjct: 78  QEIGTLQNLQSLSLESNRLEGLPKEIGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDL 137

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
             N L  LP EIG++  L++L L  N L TL   +                         
Sbjct: 138 IYNRLESLPKEIGQLQNLKRLYLVDNHLTTLPQEIWQ----------------------- 174

Query: 343 TTKEDLITMAT---RLSVTSKELS----LEGMNLSAI---PSEIWEAGEITKLDLSRNSI 392
              E+L T++    +L++  KE+     LE +NLS +   P EI     +  L LS N +
Sbjct: 175 --LENLQTLSISGNQLTILPKEIGTLQKLEDLNLSGLAVFPQEIGTLQNLKGLYLSNNRL 232

Query: 393 QELPPELSSCASLQ 406
              P E+ +  +L+
Sbjct: 233 TTFPQEIGTLQNLK 246


>gi|418693084|ref|ZP_13254147.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356742|gb|EJP12900.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 738

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 171/372 (45%), Gaps = 47/372 (12%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++++ L L+  N   L +++  L  L  L +  N+L+  PA I EL  L+SLD+S N ++
Sbjct: 48  LNVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNQLATFPAVIVELQKLESLDLSENRLV 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+EIG    L +     N+L   P  +G+  NL      +N + +LP ++     + K
Sbjct: 108 MLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+LTVL    I     L  L    N L  +P  IG L  L  L L +N++ + P 
Sbjct: 168 LNLRKNRLTVLPKE-IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPK 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL---------HSNQLKEYCVEACQL 275
            I    +L E  +  N L  LP E+G+L KL  L+L           NQL     E  QL
Sbjct: 227 EIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQL 286

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           + L +L LS N L+ LP EIG++  L+ L L GN L TL         P  +  L++   
Sbjct: 287 KNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL---------PREINKLKN--- 334

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                                    KEL L G  L+ +P EIWE   +T L L  N I  
Sbjct: 335 ------------------------LKELYLNGNKLTIVPKEIWELENLTILRLKNNRIST 370

Query: 395 LPPELSSCASLQ 406
           LP E+    +LQ
Sbjct: 371 LPKEIEKSKNLQ 382



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 185/415 (44%), Gaps = 57/415 (13%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG--------EGDKWWEAVDLQKLILAHNNIEKLKE 62
           SL+LS   L  +PNE+   +N  E G           +  +  +LQ L L  N +  L  
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPV 157

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+  N+L+ LP  IG+L  L++L++  N +  +P EIG    L     S
Sbjct: 158 EIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL   P  +G+  NL +   + N + +LP+++    K+ KL+++GN++T L       
Sbjct: 218 ENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTL------- 270

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                      N L  +P  IG L  L  L L  NR+ ++P  I    +L    +G N L
Sbjct: 271 --------PKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQL 322

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+ KL  L  L L+ N+L     E  +L  L++L L NN +S LP EI K   L+
Sbjct: 323 TTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQ 382

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L L GN L TL   +                            E+L     R+ +   E
Sbjct: 383 ELNLRGNRLVTLPGEI----------------------GELKLLEELNLENNRIKILPNE 420

Query: 362 L---------SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +         +L G  L++IP EI     +  L L  N ++ LP ++     L+V
Sbjct: 421 IGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 475



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 188/418 (44%), Gaps = 38/418 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS ++   +P E+ K               +LQKL L  N +      +  L  L  L
Sbjct: 53  LDLSGQNFTTLPKEIEK-------------LKNLQKLYLFDNQLATFPAVIVELQKLESL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N+L  LP  IG L  L+ L +  N ++  P EIG    L   +   NQL  LP  +
Sbjct: 100 DLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           GR  NL       N +T LP+++     +  L+++ N+L  L    I     L  L  S+
Sbjct: 160 GRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVE-IGQLQNLQTLGLSE 218

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM-GN--------NALSA 244
           N L   P+ IG L  L  LDL+ N++ ++P  I     L +  + GN        N L+ 
Sbjct: 219 NQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTT 278

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LPAE+G+L  L  L L  N+L     E  QL+ L  LDL  N L+ LP EI K+  L++L
Sbjct: 279 LPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKEL 338

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENEDSEASTTKEDLITMATRLSVTSK 360
            L GN L  +   +       +L+   +R   LP+  + E S   ++L     RL     
Sbjct: 339 YLNGNKLTIVPKEIWELENLTILRLKNNRISTLPK--EIEKSKNLQELNLRGNRLVTLPG 396

Query: 361 ELSLEGM---------NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           E+    +          +  +P+EI     +   +LS N +  +P E+ +  +L++ +
Sbjct: 397 EIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLY 454



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 167/390 (42%), Gaps = 65/390 (16%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L +L++S+N+L+ LP  IG+L  LKSLD+  N +  +P EI     L +   + N+L  +
Sbjct: 289 LQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIV 348

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +    NL+  +  NN I++LP+++     + +L++ GN+L  L    I    +L EL
Sbjct: 349 PKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGE-IGELKLLEEL 407

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N +  +P  IG+L  L   +L  N++ SIP  I    +L   Y+ NN L  LP ++
Sbjct: 408 NLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 467

Query: 250 GKLSKLGTLDLHSN---------------------------------------------- 263
            KL  L  L+L  N                                              
Sbjct: 468 EKLQDLEVLNLLINPLLSKERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSL 527

Query: 264 -----QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                Q   +  E  +L+ L  L L + SL  LP EI ++  L +L L  N L++L   +
Sbjct: 528 SLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEI 587

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                  LL+ LRS      D  A+   E L     RL    + L L        P EIW
Sbjct: 588 ------GLLRNLRSL-----DIGANNEFEVLPKEIARLQ-NLRSLLLNQNRFKIFPKEIW 635

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQV 407
           E  ++  L+++ N +  LP ++     LQ+
Sbjct: 636 ELKKLVILNVNTNQLDALPEKIGRLKGLQM 665



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 138/308 (44%), Gaps = 39/308 (12%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPED-----------------------LADCSKMSK 164
           +L  +L   LN+     S    T+LP++                       + +  K+  
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNQLATFPAVIVELQKLES 98

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N+L +L N  I     L EL   KN L   P+ IG L  L  L+L  N++ ++P 
Sbjct: 99  LDLSENRLVMLPNE-IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPV 157

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L +  +  N L+ LP E+G+L  L TL+L  NQL    VE  QL+ L  L LS
Sbjct: 158 EIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+  P EIG++  L++L L GN L+TL         P  +  L+     N D    T
Sbjct: 218 ENQLTTFPKEIGQLENLQELDLNGNQLKTL---------PKEIGQLQKLEKLNLDGNQIT 268

Query: 344 T---KEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           T      L T+   +      + LSL    L+ +P EI +   +  LDL  N +  LP E
Sbjct: 269 TLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPRE 328

Query: 399 LSSCASLQ 406
           ++   +L+
Sbjct: 329 INKLKNLK 336



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 6/194 (3%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ + + S  P  I  L  L+SL +   S++ +P EI     L +     NQLK LP  
Sbjct: 527 LSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKE 586

Query: 133 LGRCLNLSDFK-ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTEL 189
           +G   NL      +NN    LP+++A    +  L +  N+  +    +   W +  L  L
Sbjct: 587 IGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI---WELKKLVIL 643

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N L+ +PE IG L  L  LDL  NR+ ++PS I    +L E Y+  N +  LP E+
Sbjct: 644 NVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEI 703

Query: 250 GKLSKLGTLDLHSN 263
            +L  L  L L+ N
Sbjct: 704 ARLQNLRKLTLYEN 717



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 181/414 (43%), Gaps = 37/414 (8%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG-EGDKW-------WEAVDLQKLILAHNNIEKLKE 62
           SL+L    L  +P E+   KN  E    G+K        WE  +L  L L +N I  L +
Sbjct: 314 SLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPK 373

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++     L  LN+  N+L  LP  IGEL +L+ L++  N I  +P+EIG+   L  F+ S
Sbjct: 374 EIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLS 433

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV--------EGNKLTV 174
            N+L  +P  +G   NL      NN + +LP  +     +  L++        E  K+  
Sbjct: 434 GNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQA 493

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L  N       + E    +NL   + + +  LS    L L   +    P  I    +L  
Sbjct: 494 LLPNCNIDLRDVEEGETYRNLNLALEQPLKILS----LSLEYQQFSLFPKEILRLKNLRS 549

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL-SNNSLSGLPP 292
             + + +L ALP E+ +L  L  L L  NQLK    E   LR L  LD+ +NN    LP 
Sbjct: 550 LSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPK 609

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EI ++  LR LLL  N  +           P  +  L+  +  N ++       + I   
Sbjct: 610 EIARLQNLRSLLLNQNRFKIF---------PKEIWELKKLVILNVNTNQLDALPEKIGRL 660

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             L +    L L    L+ +PSEI +   +T+L L  N I+ LP E++   +L+
Sbjct: 661 KGLQM----LDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLR 710



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 62/118 (52%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           A+N  E L +++  L  L  L ++ N+    P  I EL  L  L+V+ N +  +P++IG 
Sbjct: 600 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 659

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
              L   D S N+L  LPS +G+  NL++     N I +LPE++A    + KL +  N
Sbjct: 660 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 2/117 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L+L  N  +   +++  L  L +LNV+ N+L  LP  IG L  L+ LD+S N +  
Sbjct: 616 NLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTT 675

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +P EIG    L +     N++K LP  + R  NL       N I   P++L    K+
Sbjct: 676 LPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYENPIP--PQELDKIRKL 730



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           WE   L  L +  N ++ L E +  L  L +L++SHN+L+ LP+ IG+LH L  L + +N
Sbjct: 635 WELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYN 694

Query: 102 SIMKIPDEIGSATALVKFDCSSN 124
            I  +P+EI     L K     N
Sbjct: 695 RIKTLPEEIARLQNLRKLTLYEN 717


>gi|170032991|ref|XP_001844363.1| leucine-rich repeat protein SHOC-2 [Culex quinquefasciatus]
 gi|261277883|sp|B0W6M9.1|SUR8_CULQU RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|167873320|gb|EDS36703.1| leucine-rich repeat protein SHOC-2 [Culex quinquefasciatus]
          Length = 628

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 192/406 (47%), Gaps = 54/406 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ +YK                L  L L  N I+ + ++L+NL  LT+L
Sbjct: 221 LDLRHNKLSEIPDVIYK-------------LHTLTTLYLRFNRIKVVGDNLKNLSSLTML 267

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELPAAIG L  L +LD+S N +  +P+ IG+   L   D   N L ++P ++
Sbjct: 268 SLRENKIHELPAAIGHLRNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDIPETI 327

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL       N +T++P  L +C  M + +VEGN ++ L + L+AS + LT +  S+
Sbjct: 328 GNLANLQRLGLRYNQLTAIPVSLRNCIHMDEFNVEGNSISQLPDGLLASLSNLTTITLSR 387

Query: 194 NLLNGMPE----------------------TIGSLSR---LIRLDLHQNRILSIPSSISG 228
           N  +  P                         G  SR   L +L++ +N + S+P  I  
Sbjct: 388 NAFHSYPSGGPAQFTNVTSINMEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGT 447

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
              + E   G N+L+ LP ++  L  L  L L +N LK        L +L VLDL  N L
Sbjct: 448 WSQMVELNFGTNSLAKLPDDIHCLQNLEILILSNNMLKRIPNTIGNLKKLRVLDLEENRL 507

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL---------LKYLRSRLP--EN 336
             LP EIG +  L+KL+L  N L++L  ++  G    L         L+YL   +   EN
Sbjct: 508 ESLPSEIGLLHDLQKLILQSNALQSLPRTI--GHLTNLTYLSVGENNLQYLPEEIGTLEN 565

Query: 337 EDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAG 380
            +S        L+ +   L++      +S+E   LSA+P E+   G
Sbjct: 566 LESLYINDNASLVKLPYELALCQNLAIMSIENCPLSALPPEVVGGG 611



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 99/199 (49%), Gaps = 14/199 (7%)

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           ++RLDL ++ I  IP S+  C SL EFY+  N +S+LP E+G LS L TL L+ N L   
Sbjct: 149 ILRLDLSKSSITVIPPSVKDCTSLIEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSL 208

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                 L+ L VLDL +N LS +P  I K+ TL  L L  N ++ +  +L N  +  +L 
Sbjct: 209 PDSLQNLKALKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSSLTMLS 268

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                L EN+  E       L  + T        L L   +L  +P  I     +T LDL
Sbjct: 269 -----LRENKIHELPAAIGHLRNLTT--------LDLSHNHLKHLPEAIGNCVNLTALDL 315

Query: 388 SRNSIQELPPELSSCASLQ 406
             N + ++P  + + A+LQ
Sbjct: 316 QHNDLLDIPETIGNLANLQ 334



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 120/252 (47%), Gaps = 10/252 (3%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL-LTVLN 74
           LSN +   +    + ++   G      +  ++  + + HN I+K++  + +    LT LN
Sbjct: 377 LSNLTTITLSRNAFHSYPSGGPA----QFTNVTSINMEHNQIDKIQYGIFSRAKGLTKLN 432

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           +  N L+ LP  IG    +  L+   NS+ K+PD+I     L     S+N LK +P+++G
Sbjct: 433 MKENALTSLPLDIGTWSQMVELNFGTNSLAKLPDDIHCLQNLEILILSNNMLKRIPNTIG 492

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
               L       N + SLP ++     + KL ++ N L  L    I   T LT L   +N
Sbjct: 493 NLKKLRVLDLEENRLESLPSEIGLLHDLQKLILQSNALQSLPRT-IGHLTNLTYLSVGEN 551

Query: 195 LLNGMPETIGSLSRLIRLDLHQN-RILSIPSSISGCCSLAEFYMGNNALSALPAEL---G 250
            L  +PE IG+L  L  L ++ N  ++ +P  ++ C +LA   + N  LSALP E+   G
Sbjct: 552 NLQYLPEEIGTLENLESLYINDNASLVKLPYELALCQNLAIMSIENCPLSALPPEVVGGG 611

Query: 251 KLSKLGTLDLHS 262
               +  L LHS
Sbjct: 612 PSLVIQYLKLHS 623


>gi|428310898|ref|YP_007121875.1| hypothetical protein Mic7113_2682 [Microcoleus sp. PCC 7113]
 gi|428252510|gb|AFZ18469.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 1126

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 197/389 (50%), Gaps = 30/389 (7%)

Query: 13   SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            SLNL+ + L ++P E+         G+      DL  L L  N +  L  ++ NL  L V
Sbjct: 748  SLNLAGKQLTELPKEI---------GN----LTDLTWLYLNRNQLATLPPEIGNLINLRV 794

Query: 73   LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-PDEIGSATALVKFDCSSNQLKELPS 131
            L++ +N+L++LP  IG L  L+ L +S N  +K+ P +I + T L + + SSNQLK LP 
Sbjct: 795  LSLENNRLTKLPKEIGNLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPK 854

Query: 132  SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
             +G   NL+    S+N +  LP+++ + + ++ LD+ GN+LT L    I + T L  L  
Sbjct: 855  EIGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPE-IGNLTNLEVLYL 913

Query: 192  SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            S+N L  +P+ IG+L+ L  LDL +N  + +P+ I    +L   Y+    L+ L  E+G 
Sbjct: 914  SRNQLTALPKEIGNLTNLTELDLSENENV-LPAEIGNLTNLRRLYLNRKQLTVLVPEIGN 972

Query: 252  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L+ L TL L  NQL     E  +L +L  LD++ N L  LPPEIG +T L +L L  N L
Sbjct: 973  LTNLKTLSLKDNQLIALPPEIGKLTQLKWLDINKNQLRQLPPEIGNLTNLTELYLYDNQL 1032

Query: 311  RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
              L   + N      L   +++L          T  +LI           EL L+   L+
Sbjct: 1033 TALPKEIGNLTNLTKLHLYKNKLMALPPEMGRLT--NLI-----------ELYLDYNQLT 1079

Query: 371  AIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            A+P EI     +T+L    N +    PE+
Sbjct: 1080 ALPPEIGNLTNLTQLSFYNNQLISPSPEI 1108



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/311 (35%), Positives = 162/311 (52%), Gaps = 25/311 (8%)

Query: 47   LQKLILAHN-NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
            L+ L L+ N  ++ L + + NL  LT LN+S N+L  LP  IG L  L  L++S N +  
Sbjct: 815  LRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKV 874

Query: 106  IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            +P EIG+ T L   D + NQL ELP  +G   NL     S N +T+LP+++ + + +++L
Sbjct: 875  LPKEIGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLSRNQLTALPKEIGNLTNLTEL 934

Query: 166  DVEGN----------------------KLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
            D+  N                      +LTVL    I + T L  L    N L  +P  I
Sbjct: 935  DLSENENVLPAEIGNLTNLRRLYLNRKQLTVLVPE-IGNLTNLKTLSLKDNQLIALPPEI 993

Query: 204  GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
            G L++L  LD+++N++  +P  I    +L E Y+ +N L+ALP E+G L+ L  L L+ N
Sbjct: 994  GKLTQLKWLDINKNQLRQLPPEIGNLTNLTELYLYDNQLTALPKEIGNLTNLTKLHLYKN 1053

Query: 264  QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
            +L     E  +L  L  L L  N L+ LPPEIG +T L +L    N L +    +V   T
Sbjct: 1054 KLMALPPEMGRLTNLIELYLDYNQLTALPPEIGNLTNLTQLSFYNNQLISPSPEIVKQGT 1113

Query: 323  PALLKYLRSRL 333
             A+L YLR +L
Sbjct: 1114 QAILAYLREQL 1124



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 167/359 (46%), Gaps = 61/359 (16%)

Query: 71   TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
            T LN++  +L+ELP  IG L  L  L ++ N +  +P EIG+   L      +N+L +LP
Sbjct: 747  TSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRVLSLENNRLTKLP 806

Query: 131  SSLGRCLNLSDFKASNNC-ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
              +G   +L     S N  +  LP+ +++ + +++L++  N+L VL    I + T LT+L
Sbjct: 807  KEIGNLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPKE-IGNLTNLTQL 865

Query: 190  IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
              S N L  +P+ IG+L+ L  LDL+ N++  +P  I    +L   Y+  N L+ALP E+
Sbjct: 866  NLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLSRNQLTALPKEI 925

Query: 250  GKLSKLGTLDLHSNQ------------LKEYCVEACQL-----------RLSVLDLSNNS 286
            G L+ L  LDL  N+            L+   +   QL            L  L L +N 
Sbjct: 926  GNLTNLTELDLSENENVLPAEIGNLTNLRRLYLNRKQLTVLVPEIGNLTNLKTLSLKDNQ 985

Query: 287  LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
            L  LPPEIGK+T L+ L +  N LR L   + N                           
Sbjct: 986  LIALPPEIGKLTQLKWLDINKNQLRQLPPEIGN--------------------------- 1018

Query: 347  DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                  T L+    EL L    L+A+P EI     +TKL L +N +  LPPE+    +L
Sbjct: 1019 -----LTNLT----ELYLYDNQLTALPKEIGNLTNLTKLHLYKNKLMALPPEMGRLTNL 1068



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 129/302 (42%), Gaps = 63/302 (20%)

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EI   T     + +  QL ELP  +G   +L+    + N + +LP ++ +   +  L 
Sbjct: 737 PKEIFQLTNQTSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRVLS 796

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI-PSS 225
           +E N+LT L                        P+ IG+LS L  L L  N  L + P  
Sbjct: 797 LENNRLTKL------------------------PKEIGNLSHLRGLYLSGNYQLKVLPKK 832

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSN 284
           IS   +L +  + +N L  LP E+G L+ L  L+L SNQLK    E      L++LDL+ 
Sbjct: 833 ISNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNG 892

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LPPEIG +T L  L L+ N L  L   + N                         
Sbjct: 893 NQLTELPPEIGNLTNLEVLYLSRNQLTALPKEIGN------------------------- 927

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               +T  T L ++  E        + +P+EI     + +L L+R  +  L PE+ +  +
Sbjct: 928 ----LTNLTELDLSENE--------NVLPAEIGNLTNLRRLYLNRKQLTVLVPEIGNLTN 975

Query: 405 LQ 406
           L+
Sbjct: 976 LK 977



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 52/219 (23%)

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P+ I  L+    L+L   ++  +P  I     L   Y+  N L+ LP E+G L       
Sbjct: 737 PKEIFQLTNQTSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNL------- 789

Query: 260 LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
                          + L VL L NN L+ LP EIG ++ LR L L+GN           
Sbjct: 790 ---------------INLRVLSLENNRLTKLPKEIGNLSHLRGLYLSGN----------- 823

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL----SLEGMNLSA---- 371
                   Y    LP+   +  + T+ +L   + +L V  KE+    +L  +NLS+    
Sbjct: 824 --------YQLKVLPKKISNLTNLTQLNL--SSNQLKVLPKEIGNLTNLTQLNLSSNQLK 873

Query: 372 -IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            +P EI     +T LDL+ N + ELPPE+ +  +L+V +
Sbjct: 874 VLPKEIGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLY 912


>gi|421099974|ref|ZP_15560616.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796955|gb|EKR99072.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 398

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 180/354 (50%), Gaps = 17/354 (4%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++  N+L+ LP  IG+L  L+ LD++ N +  +P EI     L   
Sbjct: 32  LTEALQNPTDVRILDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVL 91

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
             S N+L  LP  +     L +     N +T+LP+D+    ++ +L ++ N+LT L    
Sbjct: 92  HLSHNKLTSLPKDIEHLKELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKE- 150

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L  L    N L  +P+ IG L  L  L L+ N++ ++P  I     L   ++ +
Sbjct: 151 IGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYD 210

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L+ LP E+GKL  L  L+L +NQLK    E  QL+ L VL+LS+N L+ LP +IGK+ 
Sbjct: 211 NQLTTLPKEIGKLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQ 270

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSV 357
            L++L LT N L TL         P  + YL+  ++ E  +++  T  ++ I     L V
Sbjct: 271 NLQELYLTNNQLTTL---------PKDIGYLKELQILELTNNQLKTLPKE-IGQLQNLQV 320

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
               L+L    L+ +P +I +   + +L L+ N +  LP ++     LQ+   D
Sbjct: 321 ----LNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQILHLD 370



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 152/292 (52%), Gaps = 25/292 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI------GELHM------- 92
           +LQ L L +N +  L +++ +L  L VL++SHNKL+ LP  I       ELH+       
Sbjct: 64  NLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTSLPKDIEHLKELQELHLDYNQLTT 123

Query: 93  ----------LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
                     L+ L + +N +  +P EIG    L       NQL  LP  +G    L   
Sbjct: 124 LPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVL 183

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              +N +T+LP+++    ++  L +  N+LT L    I     L  L  + N L  +P+ 
Sbjct: 184 HLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKE-IGKLQNLQVLELTNNQLKTLPKE 242

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L+L  N++ ++P+ I    +L E Y+ NN L+ LP ++G L +L  L+L +
Sbjct: 243 IGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQILELTN 302

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           NQLK    E  QL+ L VL+LS+N L+ LP +IGK+  L++L LT N L TL
Sbjct: 303 NQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTL 354



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 164/356 (46%), Gaps = 49/356 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L+N  L  +P E+                 +LQ L L+HN +  L +D+ +L  L  L
Sbjct: 68  LDLTNNQLTALPKEI-------------EHLKELQVLHLSHNKLTSLPKDIEHLKELQEL 114

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  I  L  L+ L + +N +  +P EIG    L       NQL  LP  +
Sbjct: 115 HLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEI 174

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L      +N +T+LP+++    ++  L +  N+LT L    I     L  L  + 
Sbjct: 175 GYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKE-IGKLQNLQVLELTN 233

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG L  L  L+L  N++ ++P+ I    +L E Y+ NN L+ LP ++G L 
Sbjct: 234 NQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNNQLTTLPKDIGYLK 293

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLS-----------------------NNSLSG 289
           +L  L+L +NQLK    E  QL+ L VL+LS                       NN L+ 
Sbjct: 294 ELQILELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTT 353

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           LP +IG +  L+ L L   P   LRS           K +R  LPE   +    TK
Sbjct: 354 LPKDIGYLKELQILHLDDIP--ALRSQ---------EKKIRKLLPEAHIAFTKITK 398


>gi|429961438|gb|ELA40983.1| hypothetical protein VICG_02013 [Vittaforma corneae ATCC 50505]
          Length = 875

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 172/364 (47%), Gaps = 40/364 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+KL L+HNN++ L  ++  L  L  L +S+NKL  L   IGEL  L +L +  N + 
Sbjct: 67  VKLEKLELSHNNLKALPSEIGELKNLQHLVLSNNKLKTLSDVIGELENLSTLHLDDNELE 126

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    L   D   NQ +  P+ + +  NL      NN + S P  +A+  K+  
Sbjct: 127 TLPAAIGELENLRDLDLGDNQFESFPTVIRKLKNLERLILDNNKLESFPTVIAELRKLQT 186

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++ GNKL +L                        P+ IG L  L  L+L  N++ S+P 
Sbjct: 187 LELLGNKLKLL------------------------PDEIGELKNLQYLNLSLNKLESLPP 222

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   ++G+N L  LP  +G+L  L  L LH N LK   VE  +L+ L +L LS
Sbjct: 223 EIGELKNLQHLFLGDNKLEILPIAIGELENLQKLYLHRNNLKTLPVEIEKLKELRILQLS 282

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLPENEDSEAS 342
            N L  LP EI K+  LR L L+GN L TL  ++  G    L K YL            +
Sbjct: 283 GNKLETLPVEIEKLKELRILQLSGNKLETLPVAI--GELENLQKLYL------------N 328

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
             K + +  A       +EL L    L  +PSEI E G++  LDL  N ++ LP  +   
Sbjct: 329 DNKLETLPAAIGELDNLRELCLRNNKLKILPSEIGELGDLQYLDLKNNKLETLPAAIGEL 388

Query: 403 ASLQ 406
            +L+
Sbjct: 389 KNLR 392



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 38/240 (15%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS   L  +P E+   KN      GD   E +        +LQKL L  NN++ L  +
Sbjct: 210 LNLSLNKLESLPPEIGELKNLQHLFLGDNKLEILPIAIGELENLQKLYLHRNNLKTLPVE 269

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L +L +S NKL  LP  I +L  L+ L +S N +  +P  IG    L K   + 
Sbjct: 270 IEKLKELRILQLSGNKLETLPVEIEKLKELRILQLSGNKLETLPVAIGELENLQKLYLND 329

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L+ LP+++G   NL +    NN +  LP ++ +   +  LD++ NKL  L        
Sbjct: 330 NKLETLPAAIGELDNLRELCLRNNKLKILPSEIGELGDLQYLDLKNNKLETL-------- 381

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI---SGCCSLAEFYMGNN 240
                           P  IG L  L  L+L  N++ ++P  I   SG   L     GNN
Sbjct: 382 ----------------PAAIGELKNLRELNLSGNKLETLPIEIEKLSGSMQLLNL-RGNN 424



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 91/192 (47%), Gaps = 14/192 (7%)

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           I SI S+I     L +  + +N L ALP+E+G+L  L  L L +N+LK       +L  L
Sbjct: 56  ITSIDSNIKRLVKLEKLELSHNNLKALPSEIGELKNLQHLVLSNNKLKTLSDVIGELENL 115

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
           S L L +N L  LP  IG++  LR L L  N   +  + +        LK L   + +N 
Sbjct: 116 STLHLDDNELETLPAAIGELENLRDLDLGDNQFESFPTVIRK------LKNLERLILDNN 169

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
             E+  T   +I    +L      L L G  L  +P EI E   +  L+LS N ++ LPP
Sbjct: 170 KLESFPT---VIAELRKLQT----LELLGNKLKLLPDEIGELKNLQYLNLSLNKLESLPP 222

Query: 398 ELSSCASLQVKF 409
           E+    +LQ  F
Sbjct: 223 EIGELKNLQHLF 234


>gi|418668175|ref|ZP_13229578.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756032|gb|EKR17659.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 402

 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 162/318 (50%), Gaps = 14/318 (4%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAV-----------DLQKLILA 53
           +K  +   SL+L+N   + +P E+ +      E + W   +           +LQ L L 
Sbjct: 67  IKQLQNLKSLDLANNQFKTLPKEIGQ-LQNLQELNLWNNQLTTLPKEIEQLKNLQTLGLG 125

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N +  L +++  L  L VL +++N+L+ LP  I +L  L++L +  N I  IP+ I   
Sbjct: 126 YNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGNNQIKIIPNGIWQL 185

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L K     NQ+K +P  +G+  NL +    NN + +LP+++     +  L +  N+LT
Sbjct: 186 QNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKEIEQLKNLQTLHLGSNQLT 245

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L    N L  +P+ IG L  L  L L+ N++ ++P  I    +L 
Sbjct: 246 TLPNE-IEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYNQLTALPKEIGQLQNLK 304

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
              + NN L+ LP E+G+L  L +LDL +NQL    +E  QL+ L  LDL NN L+ LP 
Sbjct: 305 SLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTILPK 364

Query: 293 EIGKMTTLRKLLLTGNPL 310
           EIG++  L++L L  N L
Sbjct: 365 EIGQLKNLQELYLNNNQL 382



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 155/338 (45%), Gaps = 19/338 (5%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  I +L  LKSLD++ N    +P EIG    L + +  +NQL  LP 
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLTTLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL       N +T+L +++     +  L +  N+LT L    I     L  L  
Sbjct: 112 EIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKE-IEQLKNLQTLGL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N +  +P  I  L  L +L L  N+I +IP  I    +L E  + NN L  LP E+ +
Sbjct: 171 GNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKEIEQ 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL L SNQL     E  QL+ L  LDL  N L+ LP EIG++  L++L L  N L
Sbjct: 231 LKNLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLYYNQL 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMN 368
             L   +        L+ L+S                L T+   +      K L L    
Sbjct: 291 TALPKEI------GQLQNLKS---------LDLRNNQLTTLPIEIGQLQNLKSLDLRNNQ 335

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L+ +P EI +   +  LDL  N +  LP E+    +LQ
Sbjct: 336 LTTLPIEIGQLQNLKSLDLRNNQLTILPKEIGQLKNLQ 373



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 129/283 (45%), Gaps = 19/283 (6%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP+++     +  LD+  N+   L    I     L EL    N
Sbjct: 51  RVLNLSSQK-----LTTLPKEIKQLQNLKSLDLANNQFKTLPKE-IGQLQNLQELNLWNN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+ I  L  L  L L  N++ ++   I    +L   ++ NN L+ LP E+ +L  
Sbjct: 105 QLTTLPKEIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKN 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L TL L +NQ+K       QL+ L  L L  N +  +P EIG++  L++L L  N L+TL
Sbjct: 165 LQTLGLGNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTL 224

Query: 314 RS---SLVNGPTPALLKYLRSRLPENEDSEASTTK------EDLITMATRLSVTS--KEL 362
                 L N  T  L     + LP NE  +    +        L T+   +      +EL
Sbjct: 225 PKEIEQLKNLQTLHLGSNQLTTLP-NEIEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQEL 283

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           SL    L+A+P EI +   +  LDL  N +  LP E+    +L
Sbjct: 284 SLYYNQLTALPKEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNL 326


>gi|195399814|ref|XP_002058514.1| GJ14282 [Drosophila virilis]
 gi|194142074|gb|EDW58482.1| GJ14282 [Drosophila virilis]
          Length = 750

 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 172/346 (49%), Gaps = 17/346 (4%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVY--KNFDE-----------AGEGDKWWEAVDLQ 48
           D + K AR +G+LN++N+ +  VP  +Y     DE             E D WW  V L+
Sbjct: 54  DNLWKLARKTGTLNMTNKGMSRVPERIYDINEPDEDSKKANLVQLSISEEDAWWNQVPLE 113

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
            L L+ N +  +   + NL  LTVL +  N L  LP  IG+L  L  L++  N + ++P 
Sbjct: 114 NLDLSSNALSHISPKIENLLTLTVLQLHDNALVALPPEIGKLEKLVRLNLGHNKLSELPI 173

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           E+ S   L   + S N+  EL   +     L    A NN I SLP  +    +++ L + 
Sbjct: 174 ELFSLPELRHLNISHNEFIELNPDISNLHMLEFLDAGNNNINSLPGGIGFLVRLTALLLA 233

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N +  L  +++   + L +L   KN L G+PE +G L +L  L +  N I  +P    G
Sbjct: 234 NNHIKELPPDIVYMRS-LQKLDLMKNDLIGLPEDMGLLRKLQCLYIQHNDIKELP-DFEG 291

Query: 229 CCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNS 286
             +L E +  NN +  +P +L   L  L  LDL  N++ +   E C LR L+ LD+SNNS
Sbjct: 292 NEALNELHASNNFIERVPKDLCANLPHLKILDLRDNKITQLPDEVCLLRNLNRLDVSNNS 351

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           +S LP  +  +  L  L + GNP++T+R  ++   T  +LK L+ R
Sbjct: 352 ISVLPVTLASLAHLISLQVDGNPIKTIRRDILQCGTARILKTLQDR 397



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 2/182 (1%)

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           +LA   K+  +D   N+L+     L     ++TEL+ + N++  +P  I   +R+  L+L
Sbjct: 568 ELASAEKVHVVDFARNQLSAFPPGLQRMSNLVTELVLAHNVIASVPTFISQFTRITFLNL 627

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             N I  +P       +L E  + NN    LP  L +L  L  L    N +K   V   +
Sbjct: 628 SNNVIKDLPPEFGLLNTLRELNIANNRFEYLPKGLYELQGLEILVASDNHIKALNVAGLE 687

Query: 275 --LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
              RL+ LDL NN +  +PP +G +T +  L L GNP R  R  ++   T A++ YLR R
Sbjct: 688 SLPRLNTLDLRNNDIEYVPPILGNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDR 747

Query: 333 LP 334
           +P
Sbjct: 748 IP 749



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 63/311 (20%)

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +   L   D SSN L  +   +   L L+  +  +N + +LP ++    K+ +L++  NK
Sbjct: 108 NQVPLENLDLSSNALSHISPKIENLLTLTVLQLHDNALVALPPEIGKLEKLVRLNLGHNK 167

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L+ L                        P  + SL  L  L++  N  + +   IS    
Sbjct: 168 LSEL------------------------PIELFSLPELRHLNISHNEFIELNPDISNLHM 203

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L     GNN +++LP  +G L +L  L L +N +KE   +   +R L  LDL  N L GL
Sbjct: 204 LEFLDAGNNNINSLPGGIGFLVRLTALLLANNHIKELPPDIVYMRSLQKLDLMKNDLIGL 263

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA--------- 341
           P ++G +  L+ L +  N ++                     LP+ E +EA         
Sbjct: 264 PEDMGLLRKLQCLYIQHNDIK--------------------ELPDFEGNEALNELHASNN 303

Query: 342 --STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                 +DL      L +    L L    ++ +P E+     + +LD+S NSI  LP  L
Sbjct: 304 FIERVPKDLCANLPHLKI----LDLRDNKITQLPDEVCLLRNLNRLDVSNNSISVLPVTL 359

Query: 400 SSCA---SLQV 407
           +S A   SLQV
Sbjct: 360 ASLAHLISLQV 370



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 1/146 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           + V++ + N+LS  P  +  + +++  L ++ N I  +P  I   T +   + S+N +K+
Sbjct: 575 VHVVDFARNQLSAFPPGLQRMSNLVTELVLAHNVIASVPTFISQFTRITFLNLSNNVIKD 634

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP   G    L +   +NN    LP+ L +   +  L    N +  L+   + S   L  
Sbjct: 635 LPPEFGLLNTLRELNIANNRFEYLPKGLYELQGLEILVASDNHIKALNVAGLESLPRLNT 694

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDL 214
           L    N +  +P  +G+L+ +  L+L
Sbjct: 695 LDLRNNDIEYVPPILGNLTNITHLEL 720



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 7/128 (5%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           +L+LAHN I  +   +     +T LN+S+N + +LP   G L+ L+ L+++ N    +P 
Sbjct: 601 ELVLAHNVIASVPTFISQFTRITFLNLSNNVIKDLPPEFGLLNTLRELNIANNRFEYLPK 660

Query: 109 EIGSATALVKFDCSSNQLKELP----SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +     L     S N +K L      SL R LN  D +  NN I  +P  L + + ++ 
Sbjct: 661 GLYELQGLEILVASDNHIKALNVAGLESLPR-LNTLDLR--NNDIEYVPPILGNLTNITH 717

Query: 165 LDVEGNKL 172
           L++ GN  
Sbjct: 718 LELVGNPF 725



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 40/189 (21%)

Query: 222 IPSSISGCCSLAEFYM---GNNALSALPAELGKLSKLGT-LDLHSNQLKEYCVEACQL-R 276
           +P+ +    S  + ++     N LSA P  L ++S L T L L  N +        Q  R
Sbjct: 562 VPTHVFELASAEKVHVVDFARNQLSAFPPGLQRMSNLVTELVLAHNVIASVPTFISQFTR 621

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           ++ L+LSNN +  LPPE G + TLR+L +  N                  +YL   L E 
Sbjct: 622 ITFLNLSNNVIKDLPPEFGLLNTLRELNIANN----------------RFEYLPKGLYEL 665

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           +  E     ++ I          K L++ G  L ++P        +  LDL  N I+ +P
Sbjct: 666 QGLEILVASDNHI----------KALNVAG--LESLP-------RLNTLDLRNNDIEYVP 706

Query: 397 PELSSCASL 405
           P L +  ++
Sbjct: 707 PILGNLTNI 715


>gi|24650336|ref|NP_733156.1| scribbled, isoform C [Drosophila melanogaster]
 gi|23172364|gb|AAN14078.1| scribbled, isoform C [Drosophila melanogaster]
          Length = 1247

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 171/362 (47%), Gaps = 38/362 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N      L      L EN  SE   + 
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELI-----LTENFLSELPAS- 308

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C  L
Sbjct: 309 ---IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 406 QV 407
            V
Sbjct: 362 HV 363



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|6850952|emb|CAB71137.1| vartul-2 protein [Drosophila melanogaster]
          Length = 1247

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 171/362 (47%), Gaps = 38/362 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N      L      L EN  SE   + 
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELI-----LTENFLSELPAS- 308

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C  L
Sbjct: 309 ---IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 406 QV 407
            V
Sbjct: 362 HV 363



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLKELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|456875032|gb|EMF90266.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 664

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 165/329 (50%), Gaps = 15/329 (4%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S N+L+ LP  IG+L  L+ L+++ N +  +P+EIG    L +   + N+L  LP  
Sbjct: 173 LDLSSNQLTILPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTRNRLANLPEE 232

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL       N +T+LP+++ +  K+ +L +  N+   L    I     L EL   
Sbjct: 233 IGKLQNLQILNLGVNQLTTLPKEIGNLQKLQELYLGDNQFATLP-KAIGKLQKLQELDLG 291

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ I  L +L +L L+ NR+ ++P  I    +L    + NN L+ LP E+GKL
Sbjct: 292 INQLTTLPKEIEKLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKL 351

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            KL  L L +NQL     E  +L+ L  L LSNN L+ LP EIGK+  L++L L  N L 
Sbjct: 352 QKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLT 411

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL         P  +  L++      D    TT  + I    +L    K+L   G   + 
Sbjct: 412 TL---------PKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKL----KKLYSSGNQFTT 458

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +P EIW    +  L+L  N +  LP E+ 
Sbjct: 459 VPEEIWNLQNLQALNLYSNQLTSLPKEIG 487



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 160/336 (47%), Gaps = 38/336 (11%)

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
           S++ L  LP  IG+L  L+ LD+S N +  +P EIG    L K + + N+L  LP  +G+
Sbjct: 153 SNDPLWTLPKEIGKLQNLRDLDLSSNQLTILPKEIGKLQNLQKLNLTRNRLANLPEEIGK 212

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             NL +   + N + +LPE++     +  L++  N+LT L    I +   L EL    N 
Sbjct: 213 LQNLQELHLTRNRLANLPEEIGKLQNLQILNLGVNQLTTLPKE-IGNLQKLQELYLGDNQ 271

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
              +P+ IG L +L  LDL  N++ ++P  I     L + Y+ +N L+ LP E+ KL  L
Sbjct: 272 FATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQQLYLYSNRLANLPEEIEKLQNL 331

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L++NQL     E  +L +L  L L NN L+ LP EIGK+  L+ L L+ N L TL 
Sbjct: 332 QWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLP 391

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +        L++L+                              EL LE   L+ +P 
Sbjct: 392 KEI------GKLQHLQ------------------------------ELHLENNQLTTLPK 415

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFS 410
           EI +   + +L L  N +  LP E+     L+  +S
Sbjct: 416 EIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYS 451



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 193/406 (47%), Gaps = 25/406 (6%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDE--------AGEGDKWWEAVDLQKLILAHNNIEKLKE 62
            LNL+   L ++P E+ K  N  E        A   ++  +  +LQ L L  N +  L +
Sbjct: 195 KLNLTRNRLANLPEEIGKLQNLQELHLTRNRLANLPEEIGKLQNLQILNLGVNQLTTLPK 254

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++ NL  L  L +  N+ + LP AIG+L  L+ LD+  N +  +P EI     L +    
Sbjct: 255 EIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQQLYLY 314

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           SN+L  LP  + +  NL     +NN +T+LP+++    K+  L +E N+LT L    I  
Sbjct: 315 SNRLANLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKE-IGK 373

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L  S N L  +P+ IG L  L  L L  N++ ++P  I    +L E  +  N L
Sbjct: 374 LQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRL 433

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+ KL KL  L    NQ      E   L+ L  L+L +N L+ LP EIG +  L+
Sbjct: 434 TTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQ 493

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L+ N L TL   +       LL YL        D++ +T  +++  +        +E
Sbjct: 494 LLYLSDNQLATLPKEIGKLQNLQLL-YL-------SDNQLTTLPKEIGKLQ-----NLQE 540

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           L L    L+ +P EI     +  L+L+ N +  LP E+ +  +LQV
Sbjct: 541 LYLRDNQLTTLPKEIGNLQNLQVLNLNHNRLTTLPKEIGNLQNLQV 586



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 180/363 (49%), Gaps = 23/363 (6%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L L  N +  L E++  L  L  L +++N+L+ LP  IG+L  L++L +  N +  +
Sbjct: 308 LQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTL 367

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L     S+NQL  LP  +G+  +L +    NN +T+LP+++     + +L 
Sbjct: 368 PKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELR 427

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+LT L    I     L +L +S N    +PE I +L  L  L+L+ N++ S+P  I
Sbjct: 428 LDYNRLTTLPEE-IEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEI 486

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L   Y+ +N L+ LP E+GKL  L  L L  NQL     E  +L+ L  L L +N
Sbjct: 487 GNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDN 546

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP EIG +  L+ L L  N L TL   + N     +L    +RL         TT 
Sbjct: 547 QLTTLPKEIGNLQNLQVLNLNHNRLTTLPKEIGNLQNLQVLNLNHNRL---------TTL 597

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL--------SRNSIQELPP 397
            + I     L +    L L+   L+ +P EI +   + +LDL         +  IQ+L P
Sbjct: 598 PEEIGKLQNLQL----LHLDNNQLTTLPEEIGKLQNLKELDLVGNPSLIGQKEKIQKLLP 653

Query: 398 ELS 400
            +S
Sbjct: 654 NVS 656



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 180/373 (48%), Gaps = 12/373 (3%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L  N +  L E++  L  L  L+++ N+L+ LP  IG+L  L+ L++  N +  
Sbjct: 192 NLQKLNLTRNRLANLPEEIGKLQNLQELHLTRNRLANLPEEIGKLQNLQILNLGVNQLTT 251

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L +     NQ   LP ++G+   L +     N +T+LP+++    K+ +L
Sbjct: 252 LPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQQL 311

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  + N L  +P+ IG L +L  L L  N++ ++P  
Sbjct: 312 YLYSNRLANLPEE-IEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKE 370

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + NN L+ LP E+GKL  L  L L +NQL     E  +L+ L  L L  
Sbjct: 371 IGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDY 430

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EI K+  L+KL  +GN   T+   + N      L    ++L        +  
Sbjct: 431 NRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQ 490

Query: 345 KEDLITMA-TRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
              L+ ++  +L+   KE         L L    L+ +P EI +   + +L L  N +  
Sbjct: 491 NLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTT 550

Query: 395 LPPELSSCASLQV 407
           LP E+ +  +LQV
Sbjct: 551 LPKEIGNLQNLQV 563



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 150/291 (51%), Gaps = 23/291 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N +  L +++  L  L  L++ +N+L+ LP  IG+L  L+ L +S N +  
Sbjct: 330 NLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTT 389

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L +    +NQL  LP  +G+  NL + +   N +T+LPE++    K+ KL
Sbjct: 390 LPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKL 449

Query: 166 DVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPETI 203
              GN+ T +                SN L      I +   L  L  S N L  +P+ I
Sbjct: 450 YSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEI 509

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L  L  L L  N++ ++P  I    +L E Y+ +N L+ LP E+G L  L  L+L+ N
Sbjct: 510 GKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIGNLQNLQVLNLNHN 569

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +L     E   L+ L VL+L++N L+ LP EIGK+  L+ L L  N L TL
Sbjct: 570 RLTTLPKEIGNLQNLQVLNLNHNRLTTLPEEIGKLQNLQLLHLDNNQLTTL 620



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 1/176 (0%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           ++ W   +LQ L L  N +  L +++ NL  L +L +S N+L+ LP  IG+L  L+ L +
Sbjct: 461 EEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYL 520

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N +  +P EIG    L +     NQL  LP  +G   NL     ++N +T+LP+++ +
Sbjct: 521 SDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIGNLQNLQVLNLNHNRLTTLPKEIGN 580

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
              +  L++  N+LT L    I     L  L    N L  +PE IG L  L  LDL
Sbjct: 581 LQNLQVLNLNHNRLTTLPEE-IGKLQNLQLLHLDNNQLTTLPEEIGKLQNLKELDL 635


>gi|428311014|ref|YP_007121991.1| hypothetical protein Mic7113_2802 [Microcoleus sp. PCC 7113]
 gi|428252626|gb|AFZ18585.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 348

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 171/334 (51%), Gaps = 21/334 (6%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           +T L++ +++L+ LPA IG L  L  L +  N +  +P EIG  T L + D S NQLK L
Sbjct: 18  VTSLDLHNHQLTTLPAEIGNLTHLTRLSLYGNQLGMLPPEIGQLTNLKELDLSGNQLKAL 77

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G   NL+D    NN +T+LP+++ + + ++ L ++ N+LT L    I     LT L
Sbjct: 78  PEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLTGLSLDSNQLTALPEE-IGKLINLTRL 136

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N L G+P+ IG+L+ L RL    N+++++P  I    +L    + NN L  LP ++
Sbjct: 137 SLYSNRLTGLPKEIGNLTHLNRLSCDNNQLMTLPKEIGNFINLTGLSLDNNQLRELPQDI 196

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G L+ L  L + +N+L     E   L  L+ L L NN L+ L  EIG +T L  L +  N
Sbjct: 197 GNLTNLTRLSIDNNKLTSLPKEIGNLTNLTQLSLDNNKLTELLKEIGNLTHLTALAIDSN 256

Query: 309 PLRTL---RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
            L++L      L+N  T +L K   S LP         T    +T  T+LS+ S +    
Sbjct: 257 QLKSLPEEMGQLINLTTLSLYKNQLSSLP---------TAIGNLTHLTKLSLYSNQ---- 303

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
              L+A+P EI     +T L L  N +   P E+
Sbjct: 304 ---LTALPKEIGILTNLTSLSLDNNPLTSPPSEI 334



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 155/293 (52%), Gaps = 2/293 (0%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           +  +  +L++L L+ N ++ L E++ NL  LT L + +N+L+ LP  IG L  L  L + 
Sbjct: 57  EIGQLTNLKELDLSGNQLKALPEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLTGLSLD 116

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N +  +P+EIG    L +    SN+L  LP  +G   +L+     NN + +LP+++ + 
Sbjct: 117 SNQLTALPEEIGKLINLTRLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQLMTLPKEIGNF 176

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
             ++ L ++ N+L  L  + I + T LT L    N L  +P+ IG+L+ L +L L  N++
Sbjct: 177 INLTGLSLDNNQLRELPQD-IGNLTNLTRLSIDNNKLTSLPKEIGNLTNLTQLSLDNNKL 235

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
             +   I     L    + +N L +LP E+G+L  L TL L+ NQL         L  L+
Sbjct: 236 TELLKEIGNLTHLTALAIDSNQLKSLPEEMGQLINLTTLSLYKNQLSSLPTAIGNLTHLT 295

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            L L +N L+ LP EIG +T L  L L  NPL +  S ++   T A+L YLR 
Sbjct: 296 KLSLYSNQLTALPKEIGILTNLTSLSLDNNPLTSPPSEIIQQGTQAILAYLRQ 348



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 112/250 (44%), Gaps = 38/250 (15%)

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
           A   K++ LD+  ++LT L    I + T LT L    N L  +P  IG L+ L  LDL  
Sbjct: 13  AANDKVTSLDLHNHQLTTLPAE-IGNLTHLTRLSLYGNQLGMLPPEIGQLTNLKELDLSG 71

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 275
           N++ ++P  I    +L +  + NN L+ALP E+G L+ L  L L SNQL     E  +L 
Sbjct: 72  NQLKALPEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLTGLSLDSNQLTALPEEIGKLI 131

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L+ L L +N L+GLP EIG +T L +L    N L TL   + N                
Sbjct: 132 NLTRLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQLMTLPKEIGN---------------- 175

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
                                +    LSL+   L  +P +I     +T+L +  N +  L
Sbjct: 176 --------------------FINLTGLSLDNNQLRELPQDIGNLTNLTRLSIDNNKLTSL 215

Query: 396 PPELSSCASL 405
           P E+ +  +L
Sbjct: 216 PKEIGNLTNL 225



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 88/171 (51%), Gaps = 13/171 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L N  LR++P ++                 +L +L + +N +  L +++ NL  LT L
Sbjct: 182 LSLDNNQLRELPQDI-------------GNLTNLTRLSIDNNKLTSLPKEIGNLTNLTQL 228

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +NKL+EL   IG L  L +L +  N +  +P+E+G    L       NQL  LP+++
Sbjct: 229 SLDNNKLTELLKEIGNLTHLTALAIDSNQLKSLPEEMGQLINLTTLSLYKNQLSSLPTAI 288

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           G   +L+     +N +T+LP+++   + ++ L ++ N LT   + +I   T
Sbjct: 289 GNLTHLTKLSLYSNQLTALPKEIGILTNLTSLSLDNNPLTSPPSEIIQQGT 339


>gi|421108955|ref|ZP_15569484.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410005922|gb|EKO59704.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 400

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 178/394 (45%), Gaps = 74/394 (18%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS + L+ +PNE+              +  +LQ+L L++N ++ L +++  L  L VL
Sbjct: 51  LDLSEQKLKTLPNEIE-------------QLKNLQRLYLSYNQLKTLPKEIGQLQNLRVL 97

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + HN+L+ LP  IG L  L+ L +++N +  +P+EIG    L +    +NQL  LP  +
Sbjct: 98  ELIHNQLTTLPKEIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKEI 157

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL      NN +T+LP+++     +   ++  N+LT L                  
Sbjct: 158 GQLKNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTL------------------ 199

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 PE IG L  L  L+L+ N++ ++P  I    +L    +G N  + LP E+GKL 
Sbjct: 200 ------PEEIGKLKNLQVLELNNNQLTTLPKEIGQLKNLQWLDLGYNQFTILPEEIGKLK 253

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L LH NQ K    E  +L+ L VL L +N    +P EIGK+  L+ L L  N  + 
Sbjct: 254 NLQVLHLHDNQFKIIPKEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLKMLSLGYNQFKI 313

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +   +                            E L  +          L+L+   L+ +
Sbjct: 314 IPKEI----------------------------EQLQNLQW--------LNLDANQLTTL 337

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           P EI +   + +L LS N  + LP E+    +L+
Sbjct: 338 PKEIEQLQNLQELYLSYNQFKTLPKEIGQLKNLK 371



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 144/306 (47%), Gaps = 15/306 (4%)

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           + M + + I +   +   D S  +LK LP+ + +  NL     S N + +LP+++     
Sbjct: 34  TYMDLTEAIQNPLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQN 93

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L++  N+LT L    I     L EL  + N L  +P  IG L  L RL L  N++++
Sbjct: 94  LRVLELIHNQLTTLPKE-IGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMT 152

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P  I    +L   Y+ NN L+ LP E+G+L  L   +L++NQL     E  +L+ L VL
Sbjct: 153 LPKEIGQLKNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVL 212

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           +L+NN L+ LP EIG++  L+ L L  N    L   +        LK L+  L  +++  
Sbjct: 213 ELNNNQLTTLPKEIGQLKNLQWLDLGYNQFTILPEEI------GKLKNLQV-LHLHDNQF 265

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
               KE  I     L V    L L       IP EI +   +  L L  N  + +P E+ 
Sbjct: 266 KIIPKE--IGKLKNLQV----LHLHDNQFKIIPKEIGKLKNLKMLSLGYNQFKIIPKEIE 319

Query: 401 SCASLQ 406
              +LQ
Sbjct: 320 QLQNLQ 325



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 104/244 (42%), Gaps = 38/244 (15%)

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+   KL  L N  I     L  L  S N L  +P+ IG L  L  L+L  N++ ++P 
Sbjct: 51  LDLSEQKLKTLPNE-IEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLTTLPK 109

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+  N L+ LP E+G+L  L  L L +NQL     E  QL+ L  L L 
Sbjct: 110 EIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKEIGQLKNLQTLYLW 169

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP EIG++  L+   L  N L TL                    PE        
Sbjct: 170 NNQLTTLPKEIGQLKNLQVFELNNNQLTTL--------------------PEE------- 202

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                I     L V    L L    L+ +P EI +   +  LDL  N    LP E+    
Sbjct: 203 -----IGKLKNLQV----LELNNNQLTTLPKEIGQLKNLQWLDLGYNQFTILPEEIGKLK 253

Query: 404 SLQV 407
           +LQV
Sbjct: 254 NLQV 257



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N  + + +++  L  L VL++  N+   +P  IG+L  LK L + +N    
Sbjct: 254 NLQVLHLHDNQFKIIPKEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLKMLSLGYNQFKI 313

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP EI     L   +  +NQL  LP  + +  NL +   S N   +LP+++     + KL
Sbjct: 314 IPKEIEQLQNLQWLNLDANQLTTLPKEIEQLQNLQELYLSYNQFKTLPKEIGQLKNLKKL 373

Query: 166 DVEGNKLT 173
            +  ++L+
Sbjct: 374 YLNNHQLS 381



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 13/138 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +   + +P E+ K               +LQ L L  N  + + +++  L  L +L
Sbjct: 258 LHLHDNQFKIIPKEIGK-------------LKNLQVLHLHDNQFKIIPKEIGKLKNLKML 304

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+   +P  I +L  L+ L++  N +  +P EI     L +   S NQ K LP  +
Sbjct: 305 SLGYNQFKIIPKEIEQLQNLQWLNLDANQLTTLPKEIEQLQNLQELYLSYNQFKTLPKEI 364

Query: 134 GRCLNLSDFKASNNCITS 151
           G+  NL     +N+ ++S
Sbjct: 365 GQLKNLKKLYLNNHQLSS 382



 Score = 45.4 bits (106), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 15/143 (10%)

Query: 269 CVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
             EA Q  L + VLDLS   L  LP EI ++  L++L L+ N L+TL   +       +L
Sbjct: 38  LTEAIQNPLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVL 97

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + + ++L        +  KE       RL    +EL L    L+ +P+EI +   + +L 
Sbjct: 98  ELIHNQL-------TTLPKE-----IGRLQ-NLQELYLNYNQLTILPNEIGQLKNLQRLH 144

Query: 387 LSRNSIQELPPELSSCASLQVKF 409
           L  N +  LP E+    +LQ  +
Sbjct: 145 LFNNQLMTLPKEIGQLKNLQTLY 167


>gi|421127222|ref|ZP_15587446.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136033|ref|ZP_15596144.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019767|gb|EKO86581.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435312|gb|EKP84444.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 427

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 192/403 (47%), Gaps = 23/403 (5%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L + +  L  L +L++S N+L  LP  I +L  L+ LD+  N ++
Sbjct: 27  LDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLI 86

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EI     L   D  SNQL  LP  +G+  NL +   SNN +T+ P+++    K+  
Sbjct: 87  ILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQW 146

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N++  +    I     L  L    N L  +P+ IG L +L  L L  N+I ++P 
Sbjct: 147 LNLSANQIKTIPKE-IEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQ 205

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I     L   Y+  N L+ LP E+ KL KL +L L +NQL     E  QL+ L VL L+
Sbjct: 206 EIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLN 265

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPE----- 335
           NN L+ +P EIG +  L+ L L  N L T+   +       +L    ++   LP+     
Sbjct: 266 NNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKL 325

Query: 336 NEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
               E   +   L T+   +      +EL L    L+ IP EI +   + +L LS N + 
Sbjct: 326 QNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLI 385

Query: 394 ELPPELSSCASLQV------KFSDLVTNKESC---ISGCYLYW 427
            +P E+    +LQ       +FS  +  KE     +  C +Y+
Sbjct: 386 TIPKEIGQLQNLQTLYLRNNQFS--IEEKERIRKLLPKCQIYF 426



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 15/297 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LSN  L   P E+       G+  K      LQ L L+ N I+ + +++  L  L  
Sbjct: 123 ELYLSNNQLTTFPKEI-------GKLQK------LQWLNLSANQIKTIPKEIEKLQKLQS 169

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+L+ LP  IG+L  L+ L +S+N I  +P EI     L       NQL  LP  
Sbjct: 170 LYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQE 229

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +   L      NN +T+LP+++     +  L +  N+LT +    I     L +L   
Sbjct: 230 IEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE-IGHLQNLQDLYLV 288

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  LDL  N++  +P  I    +L E Y+ NN L+ +P E+G+L
Sbjct: 289 SNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQL 348

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
             L  L L +NQL     E  QL+ L  L LSNN L  +P EIG++  L+ L L  N
Sbjct: 349 QNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNN 405



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 128/253 (50%), Gaps = 14/253 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N  L  +P E+       G+  K      LQ L L++N I+ L +++  L  L  
Sbjct: 169 SLYLPNNQLTTLPQEI-------GKLQK------LQWLYLSYNQIKTLPQEIEKLQKLQW 215

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  I +L  L+SL +  N +  +P EIG    L     ++NQL  +P  
Sbjct: 216 LYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQE 275

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL D    +N +T++P+++     +  LD+  N+LT+L    I     L EL  S
Sbjct: 276 IGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKE-IGKLQNLQELYLS 334

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  L L  N++ +IP  I    +L E Y+ NN L  +P E+G+L
Sbjct: 335 NNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQL 394

Query: 253 SKLGTLDLHSNQL 265
             L TL L +NQ 
Sbjct: 395 QNLQTLYLRNNQF 407



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 13/161 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+N  L  +P E+                 +LQ L L  N +  + +++  L  L +L
Sbjct: 262 LFLNNNQLTTIPQEI-------------GHLQNLQDLYLVSNQLTTIPKEIGQLQNLQML 308

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  L+ L +S N +  IP EIG    L +   S+NQL  +P  +
Sbjct: 309 DLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLTTIPKEI 368

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           G+  NL +   SNN + ++P+++     +  L +  N+ ++
Sbjct: 369 GQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSI 409


>gi|391343057|ref|XP_003745831.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Metaseiulus
           occidentalis]
          Length = 516

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 181/364 (49%), Gaps = 16/364 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N I ++  ++  L  LT+L++  NK+  LPA IG L  L +LD S N ++ +
Sbjct: 130 LTTLFLRFNRIREVSNEIAQLSNLTMLSLRENKIRMLPAGIGLLEQLVTLDASNNHMLHL 189

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L   D   N+L ++P +LG   +L       N +TS+P+  A C+ M + +
Sbjct: 190 PPEIGKCKNLSTLDVQHNELIDVPETLGNLKSLVRLGLRYNQLTSVPKSFAACALMQEFN 249

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP-ETIGSLSRLIRLDLHQNRILSIPSS 225
           VE N ++ L + L++S+T +T L  S+N     P    G  + +  ++   N I  IP  
Sbjct: 250 VESNNISALPDGLLSSFTQMTSLTLSRNQFTSYPVGGPGQFTSVHSINFEHNHISKIPFG 309

Query: 226 I-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
           + S   +L++  M +N LSALP ++G  + +  L+L +NQL +   +   L  L VL LS
Sbjct: 310 MFSRAKNLSKLNMKDNQLSALPLDIGTWTNMVELNLATNQLVKIPDDIQYLHSLEVLVLS 369

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L  LP  IG ++ LR L L  N L  L + +        L  L+  + +N   +   
Sbjct: 370 NNILRRLPGSIGGLSKLRVLDLEENKLEQLPNEI------GFLHDLQKLMVQNNLLQTLP 423

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                +T  T L+V          N+  IP EI     +  L L+ N +  LP EL+ C+
Sbjct: 424 RAIGHLTSLTYLNVGEN-------NVQHIPEEIGTMEALESLYLNDNPLHALPFELALCS 476

Query: 404 SLQV 407
           +LQ+
Sbjct: 477 NLQI 480



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 171/404 (42%), Gaps = 87/404 (21%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           ++   R+  +L L    +R+V NE+              +  +L  L L  N I  L   
Sbjct: 123 VIYTLRSLTTLFLRFNRIREVSNEI-------------AQLSNLTMLSLRENKIRMLPAG 169

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L+ S+N +  LP  IG+   L +LDV  N ++ +P+ +G+  +LV+     
Sbjct: 170 IGLLEQLVTLDASNNHMLHLPPEIGKCKNLSTLDVQHNELIDVPETLGNLKSLVRLGLRY 229

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDL--------------------------- 156
           NQL  +P S   C  + +F   +N I++LP+ L                           
Sbjct: 230 NQLTSVPKSFAACALMQEFNVESNNISALPDGLLSSFTQMTSLTLSRNQFTSYPVGGPGQ 289

Query: 157 ----------------------ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL----- 189
                                 +    +SKL+++ N+L+ L  + I +WT + EL     
Sbjct: 290 FTSVHSINFEHNHISKIPFGMFSRAKNLSKLNMKDNQLSALPLD-IGTWTNMVELNLATN 348

Query: 190 ------------------IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                             + S N+L  +P +IG LS+L  LDL +N++  +P+ I     
Sbjct: 349 QLVKIPDDIQYLHSLEVLVLSNNILRRLPGSIGGLSKLRVLDLEENKLEQLPNEIGFLHD 408

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L +  + NN L  LP  +G L+ L  L++  N ++    E   +  L  L L++N L  L
Sbjct: 409 LQKLMVQNNLLQTLPRAIGHLTSLTYLNVGENNVQHIPEEIGTMEALESLYLNDNPLHAL 468

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           P E+   + L+ + +   PL  + + +V G    +++YL+ + P
Sbjct: 469 PFELALCSNLQIMSIENCPLSQMPAEIVIGGPSLVIQYLKMKGP 512



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 157/340 (46%), Gaps = 16/340 (4%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++S + ++ LPA + +L  L  L +  N +  +P+EIG    L     S N L  LP
Sbjct: 39  TRLDLSRSNITALPANVKDLTHLVELYLYGNKLSTLPNEIGGLVNLATLALSENSLTHLP 98

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
            SL     L      +N  T +P  +     ++ L +  N++  +SN  IA  + LT L 
Sbjct: 99  DSLTNLKQLRVLDLRHNKFTEIPPVIYTLRSLTTLFLRFNRIREVSNE-IAQLSNLTMLS 157

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +N +  +P  IG L +L+ LD   N +L +P  I  C +L+   + +N L  +P  LG
Sbjct: 158 LRENKIRMLPAGIGLLEQLVTLDASNNHMLHLPPEIGKCKNLSTLDVQHNELIDVPETLG 217

Query: 251 KLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPE-IGKMTTLRKLLLTG 307
            L  L  L L  NQL        AC L +   ++ +N++S LP   +   T +  L L+ 
Sbjct: 218 NLKSLVRLGLRYNQLTSVPKSFAACAL-MQEFNVESNNISALPDGLLSSFTQMTSLTLSR 276

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N      S  V GP     ++        E +  S     + + A  LS    +L+++  
Sbjct: 277 N---QFTSYPVGGPG----QFTSVHSINFEHNHISKIPFGMFSRAKNLS----KLNMKDN 325

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            LSA+P +I     + +L+L+ N + ++P ++    SL+V
Sbjct: 326 QLSALPLDIGTWTNMVELNLATNQLVKIPDDIQYLHSLEV 365



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 117/295 (39%), Gaps = 77/295 (26%)

Query: 150 TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           TS+  DL    ++++   EGN                T L  S++ +  +P  +  L+ L
Sbjct: 18  TSIQADLDVAKELTRCRDEGN----------------TRLDLSRSNITALPANVKDLTHL 61

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ----- 264
           + L L+ N++ ++P+ I G  +LA   +  N+L+ LP  L  L +L  LDL  N+     
Sbjct: 62  VELYLYGNKLSTLPNEIGGLVNLATLALSENSLTHLPDSLTNLKQLRVLDLRHNKFTEIP 121

Query: 265 ------------------LKEYCVEACQL------------------------RLSVLDL 282
                             ++E   E  QL                        +L  LD 
Sbjct: 122 PVIYTLRSLTTLFLRFNRIREVSNEIAQLSNLTMLSLRENKIRMLPAGIGLLEQLVTLDA 181

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           SNN +  LPPEIGK   L  L +  N L  +  +L N     L   +R  L  N+ +   
Sbjct: 182 SNNHMLHLPPEIGKCKNLSTLDVQHNELIDVPETLGN-----LKSLVRLGLRYNQLTSVP 236

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA-GEITKLDLSRNSIQELP 396
            +      M        +E ++E  N+SA+P  +  +  ++T L LSRN     P
Sbjct: 237 KSFAACALM--------QEFNVESNNISALPDGLLSSFTQMTSLTLSRNQFTSYP 283


>gi|301627568|ref|XP_002942945.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Xenopus
           (Silurana) tropicalis]
          Length = 582

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 125/400 (31%), Positives = 201/400 (50%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P  VY+                L  L L  N I  +++D++ L  LT+L
Sbjct: 174 LDLRHNKLREIPAVVYR-------------LSSLTTLFLRFNRITAVEKDIKTLSKLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+  LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS++ +L++E N ++ L   L++S   +  L  ++
Sbjct: 281 GNLCSLSRLGLRYNRLSAVPRSLAKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  + VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 114/224 (50%), Gaps = 25/224 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   +++     SNN +  LP  + +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI 294
             SKL                      S++ + N  LS LPP+I
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQI 560



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 160/342 (46%), Gaps = 20/342 (5%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L+++   +  LP +I +L  +  L +  N +  +P E+G    LVK   S N L  LP
Sbjct: 103 TRLDLAKKSIHMLPVSIKDLTQITELYLYGNKLQSLPAEVGCLVNLVKLALSENSLTSLP 162

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
            SL     L      +N +  +P  +   S ++ L +  N++T +  + I + + LT L 
Sbjct: 163 DSLDNLKKLCMLDLRHNKLREIPAVVYRLSSLTTLFLRFNRITAVEKD-IKTLSKLTMLS 221

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +N +  +P  IG L  LI LD+  N++  +P  I  C  +    + +N L  LP  +G
Sbjct: 222 IRENKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 251 KLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK---LLL 305
            L  L  L L  N+L      +  C   L  L+L NN++S LP   G +++L K   L L
Sbjct: 282 NLCSLSRLGLRYNRLSAVPRSLAKCS-ELDELNLENNNISTLPE--GLLSSLVKVNSLTL 338

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N     +S  V GP+     Y       + + E +   +    + +R  V SK L+++
Sbjct: 339 ARN---CFQSYPVGGPSQFSTIY-------SLNMEHNRINKIPFGIFSRAKVLSK-LNMK 387

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
              L+++P +      + +L+L+ N + ++P ++S   S++V
Sbjct: 388 DNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSIEV 429



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 38/221 (17%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  + VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIASW-TMLTELIASKNLLNGM 199
           SK+S + +E   L+ L   ++A   + + + +  + L   M
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGLYRAM 581


>gi|307178161|gb|EFN66969.1| Leucine-rich repeat protein SHOC-2 [Camponotus floridanus]
          Length = 624

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 206/407 (50%), Gaps = 33/407 (8%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK+ R    L+L +  L ++P+ VYK                L  L L  N ++ + +++
Sbjct: 211 LKSLRV---LDLRHNKLNEIPDVVYK-------------LTSLTTLFLRFNRVKYVNDNI 254

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           R L  LT+L++  NK+ ELPA +GEL  L + DVS N +  +P+EIG+   L   D   N
Sbjct: 255 RYLTNLTMLSLRENKIKELPAGVGELVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHN 314

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L ++P ++G  ++L+      N ++++P+ LA+C  M +  VEGN+++ L + L++S +
Sbjct: 315 ELLDIPDTIGNLVSLTRLGLRYNRLSNIPKSLANCKMMDEFSVEGNQVSHLPDGLLSSLS 374

Query: 185 MLTELIASKNLLNGMPETIGS-LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNAL 242
            LT +  S+N     P    S  + +  ++L  N+I  IP +I S   +L +  M  N L
Sbjct: 375 DLTTITLSRNNFTAYPSGGPSQFTNVYSINLEHNKIDKIPYAIFSRAKNLTKLNMKENQL 434

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +ALP ++G    +  L+L +NQL +   +   L+ L +L LSNN L  +P  I  +  LR
Sbjct: 435 TALPLDIGTWVNMVELNLGTNQLMKIPDDIQYLKSLEILILSNNLLKRIPATIANLRKLR 494

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L  N + +L + +        L+ L+  + ++    +       +T  T LSV    
Sbjct: 495 VLDLEENRIDSLPNEI------GFLRELQKLILQSNQVVSLPRAIGHLTNLTYLSVGEN- 547

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQV 407
                 NL+ +P EI     +  L ++ N+ +  LP EL+ C +L +
Sbjct: 548 ------NLNYLPEEIGTLENLESLYINDNANLHNLPFELALCTNLSI 588



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 153/330 (46%), Gaps = 17/330 (5%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +K LD+S  SI  +P  +   T L +F    N+L  LP  +G   NL     S N +TSL
Sbjct: 145 VKRLDLSKASITNLPSSVRELTHLREFYIYGNKLATLPPEIGCLANLETLALSENSLTSL 204

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P  L +   +  LD+  NKL  +  +++   T LT L    N +  + + I  L+ L  L
Sbjct: 205 PNTLENLKSLRVLDLRHNKLNEIP-DVVYKLTSLTTLFLRFNRVKYVNDNIRYLTNLTML 263

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  +P+ +    +L  F + +N L  LP E+G   +L TLDL  N+L +     
Sbjct: 264 SLRENKIKELPAGVGELVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTI 323

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLK 327
             L  L+ L L  N LS +P  +     + +  + GN +  L     SSL +  T  L +
Sbjct: 324 GNLVSLTRLGLRYNRLSNIPKSLANCKMMDEFSVEGNQVSHLPDGLLSSLSDLTTITLSR 383

Query: 328 YLRSRLPENEDSEASTT--------KEDLITMA--TRLSVTSKELSLEGMNLSAIPSEIW 377
              +  P    S+ +          K D I  A  +R    +K L+++   L+A+P +I 
Sbjct: 384 NNFTAYPSGGPSQFTNVYSINLEHNKIDKIPYAIFSRAKNLTK-LNMKENQLTALPLDIG 442

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQV 407
               + +L+L  N + ++P ++    SL++
Sbjct: 443 TWVNMVELNLGTNQLMKIPDDIQYLKSLEI 472



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 109/436 (25%), Positives = 174/436 (39%), Gaps = 118/436 (27%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG------------------ 88
           +++L L+  +I  L   +R L  L    +  NKL+ LP  IG                  
Sbjct: 145 VKRLDLSKASITNLPSSVRELTHLREFYIYGNKLATLPPEIGCLANLETLALSENSLTSL 204

Query: 89  -----ELHMLKSLDVSFNSIMKIPDEIGSATAL---------VKF--------------D 120
                 L  L+ LD+  N + +IPD +   T+L         VK+               
Sbjct: 205 PNTLENLKSLRVLDLRHNKLNEIPDVVYKLTSLTTLFLRFNRVKYVNDNIRYLTNLTMLS 264

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
              N++KELP+ +G  +NL  F  S+N +  LPE++ +C ++S LD++ N+L        
Sbjct: 265 LRENKIKELPAGVGELVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELL------- 317

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                             +P+TIG+L  L RL L  NR+ +IP S++ C  + EF +  N
Sbjct: 318 -----------------DIPDTIGNLVSLTRLGLRYNRLSNIPKSLANCKMMDEFSVEGN 360

Query: 241 ALSALP-AELGKLSKLGTLDLHSNQLKE--------------------------YCVEAC 273
            +S LP   L  LS L T+ L  N                              Y + + 
Sbjct: 361 QVSHLPDGLLSSLSDLTTITLSRNNFTAYPSGGPSQFTNVYSINLEHNKIDKIPYAIFSR 420

Query: 274 QLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR- 332
              L+ L++  N L+ LP +IG    + +L L  N L  +         P  ++YL+S  
Sbjct: 421 AKNLTKLNMKENQLTALPLDIGTWVNMVELNLGTNQLMKI---------PDDIQYLKSLE 471

Query: 333 ---LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
              L  N       T  +L  +        + L LE   + ++P+EI    E+ KL L  
Sbjct: 472 ILILSNNLLKRIPATIANLRKL--------RVLDLEENRIDSLPNEIGFLRELQKLILQS 523

Query: 390 NSIQELPPELSSCASL 405
           N +  LP  +    +L
Sbjct: 524 NQVVSLPRAIGHLTNL 539



 Score = 47.0 bits (110), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 37/168 (22%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L  +P+++           ++ +++++  LIL++N ++++   + NL  L VL
Sbjct: 450 LNLGTNQLMKIPDDI-----------QYLKSLEI--LILSNNLLKRIPATIANLRKLRVL 496

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N++  LP  IG L  L+ L +  N ++ +P  IG  T L       N L  LP  +
Sbjct: 497 DLEENRIDSLPNEIGFLRELQKLILQSNQVVSLPRAIGHLTNLTYLSVGENNLNYLPEEI 556

Query: 134 G------------------------RCLNLSDFKASNNCITSLPEDLA 157
           G                         C NLS     N  ++ +P ++ 
Sbjct: 557 GTLENLESLYINDNANLHNLPFELALCTNLSIMSIENCPLSQIPAEIV 604


>gi|456891504|gb|EMG02215.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 402

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 104/301 (34%), Positives = 151/301 (50%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L  +PNE+ K  +           +D  +     N+I KLK        L  L
Sbjct: 70  LNLYRNQLTTLPNEIGKLQNLQ------LLNLDKNQFTALPNDIGKLKN-------LQEL 116

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N+L+  P  IG+L  L+ L +S N +  +P++IG    L   D   NQL  LP+ +
Sbjct: 117 HLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGQLQNLQVLDLEHNQLTTLPNDI 176

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+   L       N + +L +++    ++  LD+ GN+LT L    I     L EL   K
Sbjct: 177 GKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKE-IGELKNLRELHLYK 235

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L +  N++ ++P  I    +L E Y+  N L  LP E+G+L 
Sbjct: 236 NQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQ 295

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  LDLH N+LK    E  +L+ L+VLDL NN L  LP EIG++ +L  L L  N L+T
Sbjct: 296 NLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKT 355

Query: 313 L 313
           L
Sbjct: 356 L 356



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 170/348 (48%), Gaps = 15/348 (4%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S+ +L+ LP  IGEL  L+ L++  N +  +P+EIG    L   
Sbjct: 34  LTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLL 93

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           +   NQ   LP+ +G+  NL +   S N +T+ P D+     + +L +  N+LT L N+ 
Sbjct: 94  NLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPND- 152

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L  L    N L  +P  IG L +L RL L +N++ ++   I     L    +  
Sbjct: 153 IGQLQNLQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNG 212

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L+ LP E+G+L  L  L L+ NQLK    +  +L+ L VL + +N L  LP EIG++ 
Sbjct: 213 NQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQ 272

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L++L L  N L+TL   +       +L    + L        +  KE  I     L+V 
Sbjct: 273 NLQELYLYTNQLKTLPKEIGELQNLTVLDLHINEL-------KTLPKE--IGELQNLTV- 322

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              L L    L  +P EI E   +T LDL  N ++ LP E+     L+
Sbjct: 323 ---LDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLKELR 367



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 135/297 (45%), Gaps = 36/297 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+LS   L   PN++              +  +L++L L+ N +  L  D+  L  L V
Sbjct: 115 ELHLSFNQLTTFPNDI-------------GQLQNLRELHLSVNQLTTLPNDIGQLQNLQV 161

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ HN+L+ LP  IG+L  L+ L +  N +  +  EIG    L   D + NQL  LP  
Sbjct: 162 LDLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKE 221

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL +     N + +LP D+ +   +  L +  N+L  L    I     L EL   
Sbjct: 222 IGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKE-IGELQNLQELYLY 280

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L  L  LDLH N + ++P  I    +L    + NN L  LP E+G+L
Sbjct: 281 TNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGEL 340

Query: 253 SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
                                   L+VLDL NN L  LP EIGK+  LRKL L   P
Sbjct: 341 QS----------------------LTVLDLRNNELKTLPNEIGKLKELRKLHLDDIP 375



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 142/301 (47%), Gaps = 14/301 (4%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S+ +L  LP  +G   NL       N +T+LP ++     +  L+++ N+ T L N+
Sbjct: 47  LDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTALPND 106

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I     L EL  S N L   P  IG L  L  L L  N++ ++P+ I    +L    + 
Sbjct: 107 -IGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGQLQNLQVLDLE 165

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
           +N L+ LP ++GKL KL  L L  NQLK    E   L+ L VLDL+ N L+ LP EIG++
Sbjct: 166 HNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGEL 225

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTTKEDLITMATRL 355
             LR+L L  N L+TL + +       +L    ++L     E  E    +E L     +L
Sbjct: 226 KNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQE-LYLYTNQL 284

Query: 356 SVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
               KE         L L    L  +P EI E   +T LDL  N ++ LP E+    SL 
Sbjct: 285 KTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSLT 344

Query: 407 V 407
           V
Sbjct: 345 V 345


>gi|456825507|gb|EMF73903.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 588

 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 132/445 (29%), Positives = 197/445 (44%), Gaps = 66/445 (14%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS ++   +P E+   KN       D     +        +L+KL L  N +  L ++
Sbjct: 55  LNLSGQNFTTLPKEIEKLKNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKE 114

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  LN+  N+L+ LP  IG+L  L++L +S N +   P EIG    L + +   
Sbjct: 115 IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKW 174

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL---- 179
           N+L  LP  +G+  NL + + S N +T+ P+++    K+  L +  N+LT     +    
Sbjct: 175 NRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLK 234

Query: 180 ------------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
                             I     L +L  S N L  +P  IG L +L  L L +N++ +
Sbjct: 235 NLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTT 294

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P  I    +L    +G N L+ LP E+G+L  L  L L  NQL  +  E  QL  L  L
Sbjct: 295 LPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQEL 354

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           DL NN L+ LP EIG++  L  L L+ N L T    +        LK L           
Sbjct: 355 DLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEI------GQLKKL----------- 397

Query: 341 ASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                +DL     RL +  KE         LSL    L+ +P EI +   +  L+LS N 
Sbjct: 398 -----QDLGLSYNRLVILPKEIGQLKNLQTLSLSYNRLTTLPKEIGQLKNLENLELSENR 452

Query: 392 IQELPPELSSCASLQVKFSDLVTNK 416
           +  LP E+    +LQ    DL TN+
Sbjct: 453 LATLPKEIGQLQNLQK--LDLDTNR 475



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 170/370 (45%), Gaps = 33/370 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N +    +++  L  L  L +  N+L+  P  IG+L  L+ LD+ +N    
Sbjct: 189 NLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKT 248

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +  EIG    L++ + S NQL  LP+ +G+   L D     N +T+LP+++     +  L
Sbjct: 249 VSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNL 308

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L    I     L  L   +N L   P+ IG L  L  LDL  NR+ ++P  
Sbjct: 309 DLGTNQLTTLPKE-IGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKE 367

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +  N L+  P E+G+L KL  L L  N+L     E  QL+ L  L LS 
Sbjct: 368 IGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLKNLQTLSLSY 427

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EIG++  L  L L+ N L TL                    P+      +  
Sbjct: 428 NRLTTLPKEIGQLKNLENLELSENRLATL--------------------PKEIGQLQNLQ 467

Query: 345 KEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           K DL T   R +   KE         L L    L+A+P EI +   +  LDL+ N +  L
Sbjct: 468 KLDLDT--NRFATFPKEIGQLQNLYNLDLGNNQLTALPKEIAQLKNLYDLDLNTNQLTTL 525

Query: 396 PPELSSCASL 405
           P E+    +L
Sbjct: 526 PKEIGQLKNL 535



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 152/312 (48%), Gaps = 12/312 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEG--------DKWWEAVDLQKLILAHNNIEKLKE 62
           +L LS   L   P E+   K   + G G         +  +  +LQ L L +N  + + +
Sbjct: 192 NLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSK 251

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+S+N+L+ LPA IG+L  L+ L +  N +  +P EIG    L   D  
Sbjct: 252 EIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLG 311

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQL  LP  +G+  NL +     N +T+ P+++     + +LD+  N+LT L    I  
Sbjct: 312 TNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKE-IGQ 370

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L  S+N L   P+ IG L +L  L L  NR++ +P  I    +L    +  N L
Sbjct: 371 LKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLKNLQTLSLSYNRL 430

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+G+L  L  L+L  N+L     E  QL+ L  LDL  N  +  P EIG++  L 
Sbjct: 431 TTLPKEIGQLKNLENLELSENRLATLPKEIGQLQNLQKLDLDTNRFATFPKEIGQLQNLY 490

Query: 302 KLLLTGNPLRTL 313
            L L  N L  L
Sbjct: 491 NLDLGNNQLTAL 502



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 152/361 (42%), Gaps = 42/361 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S    + LP  I +L  L++L++  N +  +P EIG    L K +   N+L  LP 
Sbjct: 54  VLNLSGQNFTTLPKEIEKLKNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPK 113

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL      +N + +LP ++     +  L +  N+LT      I     L EL  
Sbjct: 114 EIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKE-IGQLENLQELNL 172

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  L+L +N++ + P  I     L +  +G N L+  P E+G+
Sbjct: 173 KWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQ 232

Query: 252 LSKLGTLDLHSNQLKEYC-----------------------VEACQL-RLSVLDLSNNSL 287
           L  L  LDL  NQ K                           E  QL +L  L L  N L
Sbjct: 233 LKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQL 292

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           + LP EIG++  L  L L  N L TL   +        LK L +             +  
Sbjct: 293 TTLPKEIGQLKNLYNLDLGTNQLTTLPKEI------GQLKNLYN---------LGLGRNQ 337

Query: 348 LITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           L T    +      +EL L    L+A+P EI +   +  L+LS N +   P E+     L
Sbjct: 338 LTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKL 397

Query: 406 Q 406
           Q
Sbjct: 398 Q 398



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 131/290 (45%), Gaps = 12/290 (4%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           ++L  +L   LN+     S    T+LP+++     +  L+++ N+L  L    I     L
Sbjct: 40  RDLTKALQNPLNVRVLNLSGQNFTTLPKEIEKLKNLQTLNLQDNQLATLPVE-IGQLQNL 98

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
            +L   KN L  +P+ IG L  L  L+L  N++ ++P  I    +L    +  N L+  P
Sbjct: 99  EKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFP 158

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+G+L  L  L+L  N+L     E  QL+ L  L+LS N L+  P EIG++  L+ L L
Sbjct: 159 KEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGL 218

Query: 306 TGNPLRTLRSSLVNGPTPALLK--YLRSRLPENE------DSEASTTKEDLITMATRLSV 357
             N L T    +       +L   Y + +    E        + + +   L T+   +  
Sbjct: 219 GRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQ 278

Query: 358 TSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             K  +LSL    L+ +P EI +   +  LDL  N +  LP E+    +L
Sbjct: 279 LKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNL 328


>gi|255089727|ref|XP_002506785.1| predicted protein [Micromonas sp. RCC299]
 gi|226522058|gb|ACO68043.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 200/400 (50%), Gaps = 26/400 (6%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIE------KLKEDLRNLPLLTVLNVSHNKL 80
           E+ + + EA   + W E V L+   +    +E       +  +L  L  L  LN+  N+L
Sbjct: 4   ELQERWPEASPAEHW-EGVTLENGRVVELELEDVGLTGAVPAELGRLSALRKLNLGRNQL 62

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           + +PA IG+L  L+ L +  N +  +P EIG  T+L      SNQL  +P+ +G+  +L 
Sbjct: 63  TSVPAEIGQLTSLEELRLDRNQLTSVPAEIGQLTSLEVLYLESNQLTSVPAEIGQLASLE 122

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
            F  S N +TSLP ++   + +  L +  N+LT +    I   T L  L  ++N L  +P
Sbjct: 123 VFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTSVPAE-IWQITALEALWLNENQLTSLP 181

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             IG L+ L  L L  N++ S+P+ I     L    + +N L+++PAE+G+L+ L  L L
Sbjct: 182 AEIGQLTSLKELGLGGNQLTSVPADIGQLTLLEGLSLDSNQLTSVPAEIGQLASLKFLHL 241

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             NQL     E  QL  L  L+L +N L+ +P EIG++ +L++L+L+ N L ++      
Sbjct: 242 QGNQLASVPAEIGQLTLLEGLNLESNQLTSVPAEIGQLASLKRLILSRNQLTSV------ 295

Query: 320 GPTPALLKYLRSRLPEN-EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
              PA +  L S    N E ++ ++   ++  +A+      K L L    L+++P+EIW+
Sbjct: 296 ---PAEIGQLSSLDGLNLERNQLTSVPAEIGQLASL-----KLLHLSYNQLTSVPAEIWQ 347

Query: 379 AGEITKLDLSRNSIQELPPELSS--CASLQVKFSDLVTNK 416
              +  L L+ N +  +P  +     A  +V   D V  +
Sbjct: 348 LASLEWLWLNNNELTSVPAAIRELRAAGCRVYLGDGVMGR 387


>gi|418688840|ref|ZP_13249975.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361998|gb|EJP17951.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 492

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 175/365 (47%), Gaps = 15/365 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L  ++R L  L +L++ +N+L+ LP  IG+L  L+ L +S+N +  
Sbjct: 116 NLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       +QL  LP  +G+  NL       + +T LP+++     + +L
Sbjct: 176 LPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHEL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT+L    I     L  L   KN L  +P+ IG L  L  L+L  N+I +IP  
Sbjct: 236 DLSHNQLTILPKE-IGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I     L   Y+ NN L+ LP E+G+L  L +LDL +N+L     E   L+ L  L L +
Sbjct: 295 IEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS 354

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EIG++  L+ L L  N L TL   +        LK L  R      S   T 
Sbjct: 355 NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQN---LKSLDLR------SNQLTI 405

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I     L V    L L    L+ +P  I +   +  LDL  N +  LP E+    +
Sbjct: 406 FPKEIGQLKNLQV----LDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQN 461

Query: 405 LQVKF 409
           LQ  F
Sbjct: 462 LQELF 466



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 166/351 (47%), Gaps = 42/351 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL +S  KL+ LP  I +L  LK LD+  N +  +P EIG    L       NQL  LP 
Sbjct: 50  VLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     +NN +T+LP ++     +  LD+  N+LT+L    I     L EL  
Sbjct: 110 EIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKE-IGQLQNLQELYL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P+ IG L  L  L L+++++ ++P  I    +L    +  + L+ LP E+GK
Sbjct: 169 SYNQLTTLPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDL  NQL     E  QL +L  L L  N L+ LP EIG++  L+ L L+ N +
Sbjct: 229 LQNLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQI 288

Query: 311 RTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +T+   +        L+ L+S  LP N+                               L
Sbjct: 289 KTIPKEIEK------LQKLQSLYLPNNQ-------------------------------L 311

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCI 420
           + +P EI +   +  LDLS N +  LP E+    +LQ  +  LV+N+ + +
Sbjct: 312 TTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLY--LVSNQLTIL 360



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 189/395 (47%), Gaps = 54/395 (13%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ LIL+   +  L ++++ L  L +L++ HN+L+ LP  IG+L  L+ L + +N + 
Sbjct: 46  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     ++NQL  LP+ + +  NL      NN +T LP+++     + +
Sbjct: 106 ALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQE 165

Query: 165 LDVEGNKLTVLSN--------NLIASW-----TMLTELIASKNL---------LNGMPET 202
           L +  N+LT L           L++ +     T+  E+   +NL         L  +P+ 
Sbjct: 166 LYLSYNQLTTLPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQE 225

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  LDL  N++  +P  I     L   Y+  N L+ LP E+G+L  L +L+L  
Sbjct: 226 IGKLQNLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 285

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQ+K    E  +L +L  L L NN L+ LP EIG++  L+ L L+ N L TL        
Sbjct: 286 NQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL-------- 337

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAI 372
            P  + +L++              +DL  ++ +L++   E         L+L    L+ +
Sbjct: 338 -PQEIGHLQNL-------------QDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTL 383

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             EI +   +  LDL  N +   P E+    +LQV
Sbjct: 384 SKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQV 418



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 137/266 (51%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  + +  L +++  L  L  L++SHN+L+ LP  IG+L  L+ L +  N +  
Sbjct: 208 NLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQLTT 267

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   + S NQ+K +P  + +   L      NN +T+LP+++     +  L
Sbjct: 268 LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSL 327

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L    I     L +L    N L  +P  IG L  L  L+L  NR+ ++   
Sbjct: 328 DLSTNRLTTLPQE-IGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKE 386

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + +N L+  P E+G+L  L  LDL SNQL        QL+ L  LDL +
Sbjct: 387 IEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDS 446

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP EIG++  L++L L  N L
Sbjct: 447 NQLTTLPQEIGQLQNLQELFLNNNQL 472



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 160/334 (47%), Gaps = 35/334 (10%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWW--------EAVDLQKLILAHNNIEKLKED 63
           L L+N  L  +P E+   KN      G+           +  +LQ+L L++N +  L ++
Sbjct: 120 LFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKE 179

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L +L++  ++L+ LP  IG+L  L+ L +  + +  +P EIG    L + D S 
Sbjct: 180 IGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSH 239

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+   L       N +T+LP+++     +  L++  N++  +    I   
Sbjct: 240 NQLTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKE-IEKL 298

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L    N L  +P+ IG L  L  LDL  NR+ ++P  I    +L + Y+ +N L+
Sbjct: 299 QKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLT 358

Query: 244 ALPAELGKLSKLGTL-----------------------DLHSNQLKEYCVEACQLR-LSV 279
            LP E+G+L  L TL                       DL SNQL  +  E  QL+ L V
Sbjct: 359 ILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQV 418

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           LDL +N L+ LP  IG++  L+ L L  N L TL
Sbjct: 419 LDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTL 452



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + +++  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 277 NLKSLNLSYNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 336

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 337 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 396

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT+     I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 397 DLRSNQLTIFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 455

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 456 IGQLQNLQELFLNNNQLSS 474


>gi|195146028|ref|XP_002013992.1| GL23097 [Drosophila persimilis]
 gi|194102935|gb|EDW24978.1| GL23097 [Drosophila persimilis]
          Length = 1247

 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 165/314 (52%), Gaps = 15/314 (4%)

Query: 7   AARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRN 66
           A ++  S  L+ + + D+P+++           K  ++  LQ    + N I KL      
Sbjct: 127 ATQSQKSCGLAVQDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFTQ 173

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L  LT+L ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++
Sbjct: 174 LKNLTILGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEI 233

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           ++LP  LG    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    L
Sbjct: 234 EDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSL 292

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
           T+L  ++NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LP
Sbjct: 293 TDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELILTENFLSELP 352

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           A +G+++KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L +
Sbjct: 353 ASIGRMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDV 412

Query: 306 TGNPLRTLRSSLVN 319
           +GN L  L  SLVN
Sbjct: 413 SGNQLLYLPYSLVN 426



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 188/430 (43%), Gaps = 74/430 (17%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLNRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHN---------------------KLSELPAAIG--ELHMLKSLDV 98
            D++N   L  L+VS N                     + S+    I        KS  +
Sbjct: 77  PDIQNFENLVELDVSRNARTLSILFSPQISLLDLYFRERKSQAATTIDGHATQSQKSCGL 136

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           +   I  IPD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D   
Sbjct: 137 AVQDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFTQLKNLTILGLNDMSLTTLPADFG- 195

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
                                  S T L  L   +NLL  +PETI  L++L RLDL  N 
Sbjct: 196 -----------------------SLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 232

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           I  +P  +     L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L
Sbjct: 233 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 292

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
           + LDL+ N L  LP  I K++ L  L L  N L+ L  +L N      L      L EN 
Sbjct: 293 TDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELI-----LTENF 347

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            SE   +    I   T+LS     L+++   L  +P EI +   +  L L  N ++ LPP
Sbjct: 348 LSELPAS----IGRMTKLS----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPP 399

Query: 398 ELSSCASLQV 407
           EL +C  L V
Sbjct: 400 ELGNCTVLHV 409



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 200 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 259

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 260 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILK 319

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 320 LDQNRLQRL-NDTLGNCDNMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEI 378

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 379 GQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 437



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 272 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLETLPDGIAKLSRLTIL 318

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 319 KLDQNRLQRLNDTLGNCDNMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEI 378

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 379 GQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 436

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 437 -NQSQPLLTFQPDT 449



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 142/328 (43%), Gaps = 45/328 (13%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
           +P   G    ++ +D    S+ ++P+EI   +  L +    +N +++LP +  R   L  
Sbjct: 5   IPIFKGCNRQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLNRLRK 64

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
              S+N I  LP D+ +   + +LDV  N  T            L+ L + +  L     
Sbjct: 65  LGLSDNEIGRLPPDIQNFENLVELDVSRNART------------LSILFSPQISL----- 107

Query: 202 TIGSLSRLIRLDLH-QNRILSIPSSISGCCSLAEFYMG--NNALSALPAELGKLSKLGTL 258
                     LDL+ + R     ++I G  + ++   G     +  +P ++  L  L   
Sbjct: 108 ----------LDLYFRERKSQAATTIDGHATQSQKSCGLAVQDIPDIPDDIKHLQSLQVA 157

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           D  SN + +      QL+ L++L L++ SL+ LP + G +T L  L L  N L+ L  ++
Sbjct: 158 DFSSNPIPKLPSGFTQLKNLTILGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETI 217

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                  L K  R  L +NE        EDL      L     EL L+   L  +P E+ 
Sbjct: 218 SQ-----LTKLKRLDLGDNE-------IEDLPPYLGYLPGL-HELWLDHNQLQRLPPELG 264

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASL 405
              ++T LD+S N ++ELP E+S   SL
Sbjct: 265 LLTKLTYLDVSENRLEELPNEISGLVSL 292



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 112/274 (40%), Gaps = 40/274 (14%)

Query: 136 CLNLSDFKASNNC-ITSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           C    +F    +C +  +PE++   S+ + +L ++ N +  L  N       L +L  S 
Sbjct: 11  CNRQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFF-RLNRLRKLGLSD 69

Query: 194 NLLNGMPETIGSLSRLIRLDLHQN-RILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           N +  +P  I +   L+ LD+ +N R LSI    S   SL + Y              K 
Sbjct: 70  NEIGRLPPDIQNFENLVELDVSRNARTLSI--LFSPQISLLDLYFRER----------KS 117

Query: 253 SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
               T+D H+ Q ++ C       L+V D+ +     +P +I  + +L+    + NP+  
Sbjct: 118 QAATTIDGHATQSQKSC------GLAVQDIPD-----IPDDIKHLQSLQVADFSSNPIPK 166

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L S         +L           D   +T   D  ++ T+L    + L L    L  +
Sbjct: 167 LPSGFTQLKNLTILGL--------NDMSLTTLPADFGSL-TQL----ESLELRENLLKHL 213

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           P  I +  ++ +LDL  N I++LPP L     L 
Sbjct: 214 PETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLH 247


>gi|427783827|gb|JAA57365.1| Putative leucine-rich repeat protein shoc-2 [Rhipicephalus
           pulchellus]
          Length = 626

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 193/421 (45%), Gaps = 76/421 (18%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++ +  L ++P  VYK                L  L L  N I ++ E++ NL  LT+L
Sbjct: 219 LDVRHNKLNEIPEVVYK-------------LTSLTTLFLRFNRIREVSENIANLTNLTML 265

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELPA IG+L  L + D S N +  +P EIG+   L   D   N+L +LP ++
Sbjct: 266 SLRENKIRELPAGIGKLTQLVTFDASNNHLKHLPAEIGNCVQLSTLDVQHNELVDLPDTI 325

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  + LS F    N +T++P+ L++C  ++  +VE N ++ L   L+AS+T L  L  S+
Sbjct: 326 GNLMVLSRFGIRYNQLTAVPKSLSNCVLITDFNVESNLVSQLPEGLLASFTNLHTLTLSR 385

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P       + +  +++  N+I  IP  I S    L++  M  N L++LP +LG 
Sbjct: 386 NNFASYPSGGPAQFTTVTSINMEHNQINKIPFGIFSRAKHLSKLNMKENQLTSLPLDLGT 445

Query: 252 LSKLGTLDLHSNQLKE--------YCVEACQLR----------------LSVLDLSNNSL 287
            + +  L+L +NQL +         C+E   L                 L VLDL  N L
Sbjct: 446 WTTMVELNLGTNQLNKIPDDIQYLVCLEVLILSNNLLRRLPATIGSLGALRVLDLEENRL 505

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
            GLP EIG +  L++L++  N L  L         P  + YL                  
Sbjct: 506 DGLPNEIGHLKNLQRLVVQSNQLTNL---------PRAIGYL------------------ 538

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQ 406
                    V    LS+   NL+ IP EI     +  L ++ N ++  LP EL+ C +LQ
Sbjct: 539 ---------VNLTYLSVGENNLNQIPEEIGTLENLESLYINDNPNLHSLPFELALCTNLQ 589

Query: 407 V 407
           +
Sbjct: 590 I 590



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 160/340 (47%), Gaps = 16/340 (4%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++S + ++ LP+++ EL  L+   +  N +  +PDE+GS   L     S N L  LP
Sbjct: 148 TRLDLSKSSITVLPSSVRELSHLEEFYLYGNKLATLPDELGSLVHLETLALSENSLTTLP 207

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
            +L     L      +N +  +PE +   + ++ L +  N++  +S N IA+ T LT L 
Sbjct: 208 DTLANLKQLRVLDVRHNKLNEIPEVVYKLTSLTTLFLRFNRIREVSEN-IANLTNLTMLS 266

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +N +  +P  IG L++L+  D   N +  +P+ I  C  L+   + +N L  LP  +G
Sbjct: 267 LRENKIRELPAGIGKLTQLVTFDASNNHLKHLPAEIGNCVQLSTLDVQHNELVDLPDTIG 326

Query: 251 KLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPE-IGKMTTLRKLLLTG 307
            L  L    +  NQL      +  C L ++  ++ +N +S LP   +   T L  L L+ 
Sbjct: 327 NLMVLSRFGIRYNQLTAVPKSLSNCVL-ITDFNVESNLVSQLPEGLLASFTNLHTLTLS- 384

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
                 R++  + P+    ++        E ++ +     + + A  LS    +L+++  
Sbjct: 385 ------RNNFASYPSGGPAQFTTVTSINMEHNQINKIPFGIFSRAKHLS----KLNMKEN 434

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            L+++P ++     + +L+L  N + ++P ++     L+V
Sbjct: 435 QLTSLPLDLGTWTTMVELNLGTNQLNKIPDDIQYLVCLEV 474



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 171/363 (47%), Gaps = 18/363 (4%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           +L L+ ++I  L   +R L  L    +  NKL+ LP  +G L  L++L +S NS+  +PD
Sbjct: 149 RLDLSKSSITVLPSSVRELSHLEEFYLYGNKLATLPDELGSLVHLETLALSENSLTTLPD 208

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            + +   L   D   N+L E+P  + +  +L+      N I  + E++A+ + ++ L + 
Sbjct: 209 TLANLKQLRVLDVRHNKLNEIPEVVYKLTSLTTLFLRFNRIREVSENIANLTNLTMLSLR 268

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            NK+  L    I   T L    AS N L  +P  IG+  +L  LD+  N ++ +P +I  
Sbjct: 269 ENKIRELPAG-IGKLTQLVTFDASNNHLKHLPAEIGNCVQLSTLDVQHNELVDLPDTIGN 327

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN---QLKEYCVEACQLRLSVLDLSNN 285
              L+ F +  N L+A+P  L     +   ++ SN   QL E  + A    L  L LS N
Sbjct: 328 LMVLSRFGIRYNQLTAVPKSLSNCVLITDFNVESNLVSQLPEGLL-ASFTNLHTLTLSRN 386

Query: 286 SLSGLPP-EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           + +  P     + TT+  + +  N +  +   +      +  K+L S+L   E+ + ++ 
Sbjct: 387 NFASYPSGGPAQFTTVTSINMEHNQINKIPFGIF-----SRAKHL-SKLNMKEN-QLTSL 439

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
             DL T  T +     EL+L    L+ IP +I     +  L LS N ++ LP  + S  +
Sbjct: 440 PLDLGTWTTMV-----ELNLGTNQLNKIPDDIQYLVCLEVLILSNNLLRRLPATIGSLGA 494

Query: 405 LQV 407
           L+V
Sbjct: 495 LRV 497


>gi|260788660|ref|XP_002589367.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
 gi|229274544|gb|EEN45378.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
          Length = 762

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 197/405 (48%), Gaps = 25/405 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN+ L  +P EV+             +  DL+ L +++N +  + E +  L  L  L
Sbjct: 17  LDLSNQGLTSIPEEVF-------------DITDLEALDVSNNKLTSIPEAIGRLQKLYRL 63

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           + + N L+ LP AI  L  LK L V  N++ ++PD +     L       N+LK+LP+ +
Sbjct: 64  DANGNMLTSLPQAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKI 123

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
             CLNL +F ASNN +++ P  +    K+ +L + GN+LT + +  + S   L  L    
Sbjct: 124 FSCLNLVNFDASNNNLSTFPPGVEKLQKVRELRIYGNQLTEVPSG-VCSLPNLELLSVGN 182

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L+  P  +  L +L  L ++ N++  +P  +    +L       N  S  P  + KL 
Sbjct: 183 NKLSTFPPGVEKLQKLRILYIYGNQLTEVPRGVCSLSNLESLEANGNKFSTFPLGVEKLQ 242

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L +H NQL E     C L  L VLD+ NN L   PP + K+  LR+L + GN L  
Sbjct: 243 KLTRLLIHDNQLTEVPSGVCSLPNLEVLDVGNNKLFTFPPGVEKLQKLRELYIYGNQLTE 302

Query: 313 LRSSLVNGPTPALLKYLRSRL---PENEDSEASTTK-----EDLITMATRL-SVTSKELS 363
           + S + + P   +L  + ++L   P   +     TK       L  + + + S+ + EL 
Sbjct: 303 VPSGVRSLPNLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTEVPSGVCSLPNLELL 362

Query: 364 LEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           + G N LS  P  + +  ++ +L +  N + E+PP + S  +L+V
Sbjct: 363 VVGNNMLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEV 407



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 170/362 (46%), Gaps = 15/362 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L + +N +      +  L  L +L +  N+L+E+P  +  L  L+SL+ + N    
Sbjct: 174 NLELLSVGNNKLSTFPPGVEKLQKLRILYIYGNQLTEVPRGVCSLSNLESLEANGNKFST 233

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  +     L +     NQL E+PS +    NL      NN + + P  +    K+ +L
Sbjct: 234 FPLGVEKLQKLTRLLIHDNQLTEVPSGVCSLPNLEVLDVGNNKLFTFPPGVEKLQKLREL 293

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            + GN+LT + +  + S   L  L    N L+  P  +  L +L +L ++ N++  +PS 
Sbjct: 294 YIYGNQLTEVPSG-VRSLPNLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTEVPSG 352

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           +    +L    +GNN LS  P  + KL KL  L ++ NQL E     C L  L VL + N
Sbjct: 353 VCSLPNLELLVVGNNMLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVLHVYN 412

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N LS  PP + K+  LR+L +  N L  + S + + P   +L    +++         +T
Sbjct: 413 NKLSTFPPGVEKLQKLRELRIHDNQLTEVPSRVCSLPNLEVLTVGNNKV---------ST 463

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               +   T+L    +EL + G  L+ +PS +     + KL +  N I+ LP +++  A 
Sbjct: 464 FPPGVEKLTKL----RELYINGNQLTEVPSGVCSLPNLEKLSVGGNPIRRLPDDVTRLAR 519

Query: 405 LQ 406
           L+
Sbjct: 520 LK 521



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 184/413 (44%), Gaps = 46/413 (11%)

Query: 11  SGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLL 70
           SG  +L N  + DV N     F    E     +   L++L +  N + ++   +R+LP L
Sbjct: 259 SGVCSLPNLEVLDVGNNKLFTFPPGVE-----KLQKLRELYIYGNQLTEVPSGVRSLPNL 313

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS------------------ 112
            VL+V +NKLS  P  + +L  L  L ++ N + ++P  + S                  
Sbjct: 314 EVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTEVPSGVCSLPNLELLVVGNNMLSTFP 373

Query: 113 -----ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
                   L +     NQL E+P  +    NL      NN +++ P  +    K+ +L +
Sbjct: 374 PGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVLHVYNNKLSTFPPGVEKLQKLRELRI 433

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
             N+LT + +  + S   L  L    N ++  P  +  L++L  L ++ N++  +PS + 
Sbjct: 434 HDNQLTEVPSR-VCSLPNLEVLTVGNNKVSTFPPGVEKLTKLRELYINGNQLTEVPSGVC 492

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNS 286
              +L +  +G N +  LP ++ +L++L  L + + Q  E+  +  QL+ L VL      
Sbjct: 493 SLPNLEKLSVGGNPIRRLPDDVTRLARLKALSVPNCQFDEFPRQVLQLKTLEVLYAGGCK 552

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEASTTK 345
              +P E+G +  L  L L  N LRTL S++ +      L  LR  RL +N+        
Sbjct: 553 FDMVPDEVGNLQHLCYLSLEYNLLRTLPSTMSH------LHNLRVVRLNKNKFDTFPEVL 606

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
            +L  M        ++L +   N++ +P+ +  A ++  LD+S N +   PP+
Sbjct: 607 CELPAM--------EKLDISNNNITRLPTALHRADKLRDLDVSGNPL-AYPPQ 650



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 147/340 (43%), Gaps = 34/340 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L++ +N +      +  L  L  L +  N+L+E+P  +  L  L+ L V  N +  
Sbjct: 358 NLELLVVGNNMLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVLHVYNNKLST 417

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  +     L +     NQL E+PS +    NL      NN +++ P  +   +K+ +L
Sbjct: 418 FPPGVEKLQKLRELRIHDNQLTEVPSRVCSLPNLEVLTVGNNKVSTFPPGVEKLTKLREL 477

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            + GN+LT + +  + S   L +L    N +  +P+ +  L+RL  L +   +    P  
Sbjct: 478 YINGNQLTEVPSG-VCSLPNLEKLSVGGNPIRRLPDDVTRLARLKALSVPNCQFDEFPRQ 536

Query: 226 ISGCCSLAEFYMGN-----------------------NALSALPAELGKLSKLGTLDLHS 262
           +    +L   Y G                        N L  LP+ +  L  L  + L+ 
Sbjct: 537 VLQLKTLEVLYAGGCKFDMVPDEVGNLQHLCYLSLEYNLLRTLPSTMSHLHNLRVVRLNK 596

Query: 263 NQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+   +    C+L  +  LD+SNN+++ LP  + +   LR L ++GNPL      +    
Sbjct: 597 NKFDTFPEVLCELPAMEKLDISNNNITRLPTALHRADKLRDLDVSGNPLAYPPQDVCEQG 656

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           T A++ +L+         EA   K+ ++    RLSV + +
Sbjct: 657 TGAIMAFLK--------QEADKEKK-ILRAFNRLSVRASQ 687



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 14/201 (6%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           + LDL    + SIP  +     L    + NN L+++P  +G+L KL  LD + N L    
Sbjct: 15  LYLDLSNQGLTSIPEEVFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDANGNMLTSLP 74

Query: 270 VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L+ L  L + +N+LS LP  +  +  L  L +  N L+ L + +      + L  
Sbjct: 75  QAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIF-----SCLNL 129

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           +      N  S      E L  +        +EL + G  L+ +PS +     +  L + 
Sbjct: 130 VNFDASNNNLSTFPPGVEKLQKV--------RELRIYGNQLTEVPSGVCSLPNLELLSVG 181

Query: 389 RNSIQELPPELSSCASLQVKF 409
            N +   PP +     L++ +
Sbjct: 182 NNKLSTFPPGVEKLQKLRILY 202


>gi|17227620|ref|NP_484168.1| hypothetical protein alr0124 [Nostoc sp. PCC 7120]
 gi|17135102|dbj|BAB77648.1| leucine-rich-repeat protein [Nostoc sp. PCC 7120]
          Length = 1119

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 154/273 (56%), Gaps = 2/273 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +LIL+ N I ++ E L  L  LT LN+S+N+++E+P A+ +L  L  L++S+N I +
Sbjct: 127 NLTQLILSDNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITE 186

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ +   T L + +   NQ  E+P +L +  NL+    S N  T +PE LA  + +++L
Sbjct: 187 IPEALAKLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIPEALAKLTNLTQL 246

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N++  +    IA  T LT LI S N +  +PETI  L+ L +L L  N+I  IP +
Sbjct: 247 ILSDNQIKEIPET-IAKLTNLTHLILSGNQIKEIPETIAKLTNLTQLGLDGNQIKEIPEA 305

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I+   +L +  +  N +  +P  + KL+ L  L L  NQ+KE      +L  L+ L LS+
Sbjct: 306 IAKLTNLTQLGLDGNQIKEIPEAITKLTNLTHLILSGNQIKEIPETIAKLTNLTQLALSS 365

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           N ++ +P  + ++T L +L L+ N +  +  +L
Sbjct: 366 NQITEIPEVLAQLTNLTQLFLSSNQITQIPEAL 398



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 150/274 (54%), Gaps = 2/274 (0%)

Query: 36  GEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS 95
           G  D   + + L++LIL    + ++ E L  L  LT L +S N+++E+P A+ +L  L  
Sbjct: 94  GIPDVVMQILHLEELILIRVQLTEIPEALAKLTNLTQLILSDNQITEIPEALAKLTNLTQ 153

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           L++S+N I +IP+ +   T L + + S NQ+ E+P +L +  NL+      N  T +PE 
Sbjct: 154 LNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLRGNQRTEIPEA 213

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           LA  + +++L++  N+ T +   L A  T LT+LI S N +  +PETI  L+ L  L L 
Sbjct: 214 LAKLTNLTRLNLSYNQRTEIPEAL-AKLTNLTQLILSDNQIKEIPETIAKLTNLTHLILS 272

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N+I  IP +I+   +L +  +  N +  +P  + KL+ L  L L  NQ+KE      +L
Sbjct: 273 GNQIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGNQIKEIPEAITKL 332

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
             L+ L LS N +  +P  I K+T L +L L+ N
Sbjct: 333 TNLTHLILSGNQIKEIPETIAKLTNLTQLALSSN 366



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 207/435 (47%), Gaps = 45/435 (10%)

Query: 4   ILKAARTSG--SLNLSNRSLRDVPNEVYK--NFDEA--GEGDKWWEAVDLQKLILA-HNN 56
           +++ A T G   L+LS + L ++P E+ K    +    G+    +E V  +    A  NN
Sbjct: 9   LIEQAATEGWRELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEKVGYRIFQKALGNN 68

Query: 57  IEKLKEDLRNLPLLTVLNVSHN-----------------------KLSELPAAIGELHML 93
           ++ L  +L +LP L  L++S N                       +L+E+P A+ +L  L
Sbjct: 69  LKTLPIELLSLPNLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPEALAKLTNL 128

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
             L +S N I +IP+ +   T L + + S NQ+ E+P +L +  NL+    S N IT +P
Sbjct: 129 TQLILSDNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIP 188

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           E LA  + +++L++ GN+ T +   L A  T LT L  S N    +PE +  L+ L +L 
Sbjct: 189 EALAKLTNLTQLNLRGNQRTEIPEAL-AKLTNLTRLNLSYNQRTEIPEALAKLTNLTQLI 247

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L  N+I  IP +I+   +L    +  N +  +P  + KL+ L  L L  NQ+KE      
Sbjct: 248 LSDNQIKEIPETIAKLTNLTHLILSGNQIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIA 307

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           +L  L+ L L  N +  +P  I K+T L  L+L+GN ++ +  ++       L    +  
Sbjct: 308 KLTNLTQLGLDGNQIKEIPEAITKLTNLTHLILSGNQIKEIPETIA-----KLTNLTQLA 362

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
           L  N+ +E      +++   T L+    +L L    ++ IP  +     +T L L  N I
Sbjct: 363 LSSNQITEIP----EVLAQLTNLT----QLFLSSNQITQIPEALAPLTNLTTLHLRVNQI 414

Query: 393 QELPPELSSCASLQV 407
            ++P  + S   L++
Sbjct: 415 TQIPEAIESLPKLEL 429



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 157/308 (50%), Gaps = 17/308 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLS   + ++P  + K               +L +L L  N   ++ E L  L  LT 
Sbjct: 176 QLNLSYNQITEIPEALAK-------------LTNLTQLNLRGNQRTEIPEALAKLTNLTR 222

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S+N+ +E+P A+ +L  L  L +S N I +IP+ I   T L     S NQ+KE+P +
Sbjct: 223 LNLSYNQRTEIPEALAKLTNLTQLILSDNQIKEIPETIAKLTNLTHLILSGNQIKEIPET 282

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +  NL+      N I  +PE +A  + +++L ++GN++  +    I   T LT LI S
Sbjct: 283 IAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGNQIKEIPE-AITKLTNLTHLILS 341

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N +  +PETI  L+ L +L L  N+I  IP  ++   +L + ++ +N ++ +P  L  L
Sbjct: 342 GNQIKEIPETIAKLTNLTQLALSSNQITEIPEVLAQLTNLTQLFLSSNQITQIPEALAPL 401

Query: 253 SKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           + L TL L  NQ+ +    +E+   +L +LDL  N L   P  +G +  +  +    N L
Sbjct: 402 TNLTTLHLRVNQITQIPEAIESLP-KLELLDLRGNPLPISPEILGSVYQVGSVEEIFNYL 460

Query: 311 RTLRSSLV 318
           R LRS  V
Sbjct: 461 RLLRSGEV 468



 Score = 39.3 bits (90), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 50/93 (53%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L L+ N I ++ E L  L  LT L++  N+++++P AI  L  L+ LD+  N +  
Sbjct: 380 NLTQLFLSSNQITQIPEALAPLTNLTTLHLRVNQITQIPEAIESLPKLELLDLRGNPLPI 439

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLN 138
            P+ +GS   +   +   N L+ L S   R LN
Sbjct: 440 SPEILGSVYQVGSVEEIFNYLRLLRSGEVRPLN 472


>gi|62472958|ref|NP_001014669.1| scribbled, isoform I [Drosophila melanogaster]
 gi|61679402|gb|AAX52996.1| scribbled, isoform I [Drosophila melanogaster]
          Length = 1711

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 171/362 (47%), Gaps = 38/362 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N      L      L EN  SE   + 
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELI-----LTENFLSELPAS- 308

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C  L
Sbjct: 309 ---IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 406 QV 407
            V
Sbjct: 362 HV 363



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|418701720|ref|ZP_13262642.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759284|gb|EKR25499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 356

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 139/270 (51%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D+Q LIL    ++ +  ++  L  L  L+++ N+L+ LP  IG+LH L+ LD+ FN + 
Sbjct: 48  LDVQVLILREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQLT 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L+      NQL  LP  +G+  NL       N  T+LP++      + K
Sbjct: 108 TLPKEIGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+   L    I     L EL  + N    +P+    L  L  L+L  N++ ++P 
Sbjct: 168 LTLGYNQFKTLPKE-IGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPK 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   Y+ NN L+ALP E+G+L  L  LDL  NQL     E  QL+ L  L L 
Sbjct: 227 EIEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLG 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           NN L+ LP EIG++  L++L L  N L TL
Sbjct: 287 NNQLTALPKEIGQLKNLQELNLWNNQLTTL 316



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 145/305 (47%), Gaps = 27/305 (8%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWW---------------EAVDLQKLILAHNNIEKL 60
           L  + L+ VPNE+     E  +  +W                +  DLQ L L  N +  L
Sbjct: 55  LREQKLKTVPNEI-----EQLKNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQLTTL 109

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +++  L  L  L + +N+L+ LP  IG+L  L+ L++  N    +P E     +L K  
Sbjct: 110 PKEIGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQKLT 169

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
              NQ K LP  +G+  NL +   ++N  T LP+       +  L++  N+LT L    I
Sbjct: 170 LGYNQFKTLPKEIGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPKE-I 228

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                L  L  + N L  +P+ IG L  L  LDL  N++ ++P  I    +L   Y+GNN
Sbjct: 229 EQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLGNN 288

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L+ALP E+G+L  L  L+L +NQL    +E  QL+ L  L L NN  S     I +   
Sbjct: 289 QLTALPKEIGQLKNLQELNLWNNQLTTLPIEIGQLQNLQTLYLRNNQFS-----IEEKER 343

Query: 300 LRKLL 304
           +RKLL
Sbjct: 344 IRKLL 348



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 119/284 (41%), Gaps = 38/284 (13%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           +EL  +L   L++         + ++P ++     +  L +  N+LT+L           
Sbjct: 38  RELTKALQNPLDVQVLILREQKLKTVPNEIEQLKNLQWLHLNTNQLTIL----------- 86

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                        P+ IG L  L  LDL  N++ ++P  I    +L   Y+G N L+ALP
Sbjct: 87  -------------PKEIGQLHDLQWLDLDFNQLTTLPKEIGQLKNLLTLYLGYNQLTALP 133

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+G+L  L  L+L +NQ      E  QL+ L  L L  N    LP EIG++  L++L L
Sbjct: 134 KEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQKLTLGYNQFKTLPKEIGQLKNLQELYL 193

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N    L         P   + L++    N      TT    I     L      L L 
Sbjct: 194 NDNQFTIL---------PKKFEQLKNLHVLNLGYNQLTTLPKEIEQLKNLHT----LYLN 240

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
              L+A+P EI +  ++  LDL  N +  LP E+    +LQ  +
Sbjct: 241 NNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLY 284



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 10/172 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGD--------KWWEAVDLQKLILAHNNIEKLKE 62
            L L     + +P E+   KN  E    D        K+ +  +L  L L +N +  L +
Sbjct: 167 KLTLGYNQFKTLPKEIGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPK 226

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +++N+L+ LP  IG+LH L+ LD+ +N +  +P EIG    L      
Sbjct: 227 EIEQLKNLHTLYLNNNQLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLG 286

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +NQL  LP  +G+  NL +    NN +T+LP ++     +  L +  N+ ++
Sbjct: 287 NNQLTALPKEIGQLKNLQELNLWNNQLTTLPIEIGQLQNLQTLYLRNNQFSI 338


>gi|428297417|ref|YP_007135723.1| adenylate cyclase [Calothrix sp. PCC 6303]
 gi|428233961|gb|AFY99750.1| Adenylate cyclase [Calothrix sp. PCC 6303]
          Length = 1034

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 187/370 (50%), Gaps = 28/370 (7%)

Query: 35  AGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLK 94
           A    + W+ ++L  + L+     +L  ++ NL  LT L ++ N+LS LP A G L  L 
Sbjct: 11  AQAAKEQWKELNLSGMDLS-----ELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLT 65

Query: 95  SLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE 154
            L +S N +  +P+  G+ T+L     ++NQ+  LP S+G   +L+    S N + +LPE
Sbjct: 66  HLYLSANQLNALPEAFGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPE 125

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
              + + ++ LD+  N LT L ++ + + T L  L  + N L  +P++ G+L+ L  LDL
Sbjct: 126 AFGNLTSLTFLDLNSNPLTGLPDS-VGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDL 184

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
            +N++ ++P +     SL   Y+  N ++ALP  +G L+ L  L L +NQL         
Sbjct: 185 SENQLNALPEAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNNQLNTLPESIVN 244

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR- 332
           L  L+ L LS N L+ LP   G +++L  L L+GN L  L  +  N  +   L YL S  
Sbjct: 245 LTNLTDLYLSENQLNALPETFGNLSSLTDLYLSGNQLNALPETFGNLSSLTYL-YLNSNQ 303

Query: 333 ---LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
              LPE+            I    +L    KEL L    L  +P E+ +  ++ KLD+  
Sbjct: 304 LTGLPES------------IGQLNKL----KELILYDNKLLTLPQELTKLTQLKKLDIRN 347

Query: 390 NSIQELPPEL 399
           N + ELPPE+
Sbjct: 348 NDLGELPPEV 357



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 171/327 (52%), Gaps = 13/327 (3%)

Query: 4   ILKAARTS-GSLNLSNRSLRDVPNEV---------YKNFDEAGE-GDKWWEAVDLQKLIL 52
           I +AA+     LNLS   L ++P+E+         Y N ++     + +     L  L L
Sbjct: 10  IAQAAKEQWKELNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYL 69

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           + N +  L E   NL  L  L +++N+++ LP +IG L  L SLD+S N +  +P+  G+
Sbjct: 70  SANQLNALPEAFGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFGN 129

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            T+L   D +SN L  LP S+G   +L     +NN + +LP+   + + ++ LD+  N+L
Sbjct: 130 LTSLTFLDLNSNPLTGLPDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQL 189

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
             L      + + LT L  S N +N +PE+IG+L+ L  L L  N++ ++P SI    +L
Sbjct: 190 NALP-EAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNNQLNTLPESIVNLTNL 248

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
            + Y+  N L+ALP   G LS L  L L  NQL         L  L+ L L++N L+GLP
Sbjct: 249 TDLYLSENQLNALPETFGNLSSLTDLYLSGNQLNALPETFGNLSSLTYLYLNSNQLTGLP 308

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLV 318
             IG++  L++L+L  N L TL   L 
Sbjct: 309 ESIGQLNKLKELILYDNKLLTLPQELT 335



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 147/276 (53%), Gaps = 23/276 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N I  L E + NL  LT L++S N+L+ LP A G L  L  LD++ N +  +
Sbjct: 87  LRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLNSNPLTGL 146

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +G+ T+L     ++NQLK LP S G   +L+    S N + +LPE   + S ++ L 
Sbjct: 147 PDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQLNALPEAFGNLSSLTYLY 206

Query: 167 VEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGMPETIG 204
           + GN++  L  ++                      I + T LT+L  S+N LN +PET G
Sbjct: 207 LSGNQINALPESIGNLTNLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQLNALPETFG 266

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           +LS L  L L  N++ ++P +     SL   Y+ +N L+ LP  +G+L+KL  L L+ N+
Sbjct: 267 NLSSLTDLYLSGNQLNALPETFGNLSSLTYLYLNSNQLTGLPESIGQLNKLKELILYDNK 326

Query: 265 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
           L     E  +L +L  LD+ NN L  LPPE+ +  T
Sbjct: 327 LLTLPQELTKLTQLKKLDIRNNDLGELPPEVKRKYT 362



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 92/212 (43%), Gaps = 39/212 (18%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L+ +P  IG+L+ L  L L++N++ ++P +     SL   Y+  N L+ALP   G L+ L
Sbjct: 28  LSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNALPEAFGNLTSL 87

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L++NQ+         L  L+ LDLS N L+ LP   G +T+L  L L  NPL  L 
Sbjct: 88  RYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLNSNPLTGLP 147

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS-KELSLEGMNLSAIP 373
            S+ N                                     +TS K L L    L A+P
Sbjct: 148 DSVGN-------------------------------------LTSLKHLYLNNNQLKALP 170

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                   +T LDLS N +  LP    + +SL
Sbjct: 171 DSAGNLTSLTFLDLSENQLNALPEAFGNLSSL 202



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 75/141 (53%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L+ L L +N +  L E + NL  LT L +S N+L+ LP   G L  L  L +S N + 
Sbjct: 223 TNLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQLNALPETFGNLSSLTDLYLSGNQLN 282

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+  G+ ++L     +SNQL  LP S+G+   L +    +N + +LP++L   +++ K
Sbjct: 283 ALPETFGNLSSLTYLYLNSNQLTGLPESIGQLNKLKELILYDNKLLTLPQELTKLTQLKK 342

Query: 165 LDVEGNKLTVLSNNLIASWTM 185
           LD+  N L  L   +   +T 
Sbjct: 343 LDIRNNDLGELPPEVKRKYTQ 363



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 69/185 (37%), Gaps = 58/185 (31%)

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 281
           +PS I    SL + Y+  N LS LP   G L+ L  L L +NQ                 
Sbjct: 31  LPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQ----------------- 73

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
                L+ LP   G +T+LR L L  N +  L  S+ N                      
Sbjct: 74  -----LNALPEAFGNLTSLRYLKLNNNQINALPESIGN---------------------- 106

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                  +T  T L +++ +L+       A+P        +T LDL+ N +  LP  + +
Sbjct: 107 -------LTSLTSLDLSANQLN-------ALPEAFGNLTSLTFLDLNSNPLTGLPDSVGN 152

Query: 402 CASLQ 406
             SL+
Sbjct: 153 LTSLK 157



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 15/147 (10%)

Query: 269 CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
             +A + +   L+LS   LS LP EIG +T+L  L L  N L TL  +  N     L   
Sbjct: 10  IAQAAKEQWKELNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGN-----LTSL 64

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               L  N+ +       +L ++        + L L    ++A+P  I     +T LDLS
Sbjct: 65  THLYLSANQLNALPEAFGNLTSL--------RYLKLNNNQINALPESIGNLTSLTSLDLS 116

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTN 415
            N +  LP    +  SL   F DL +N
Sbjct: 117 ANQLNALPEAFGNLTSL--TFLDLNSN 141


>gi|24650332|ref|NP_733154.1| scribbled, isoform A [Drosophila melanogaster]
 gi|386766560|ref|NP_001036761.3| scribbled, isoform B [Drosophila melanogaster]
 gi|23172362|gb|AAN14076.1| scribbled, isoform A [Drosophila melanogaster]
 gi|383292965|gb|ABI31210.3| scribbled, isoform B [Drosophila melanogaster]
          Length = 1756

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|442621262|ref|NP_001262989.1| scribbled, isoform U [Drosophila melanogaster]
 gi|440217926|gb|AGB96369.1| scribbled, isoform U [Drosophila melanogaster]
          Length = 1766

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|386766575|ref|NP_733155.2| scribbled, isoform P [Drosophila melanogaster]
 gi|383292969|gb|AAN14077.2| scribbled, isoform P [Drosophila melanogaster]
          Length = 1729

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 171/362 (47%), Gaps = 38/362 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N      L      L EN  SE   + 
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELI-----LTENFLSELPAS- 308

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C  L
Sbjct: 309 ---IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 406 QV 407
            V
Sbjct: 362 HV 363



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|7144483|gb|AAF26357.2| Scribble [Drosophila melanogaster]
          Length = 1756

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|386766567|ref|NP_001247318.1| scribbled, isoform K [Drosophila melanogaster]
 gi|383292966|gb|AFH06635.1| scribbled, isoform K [Drosophila melanogaster]
          Length = 2331

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|157106660|ref|XP_001649425.1| shoc2 [Aedes aegypti]
 gi|108868804|gb|EAT33029.1| AAEL014718-PA [Aedes aegypti]
          Length = 527

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 193/421 (45%), Gaps = 76/421 (18%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ +YK                L  L L  N I+ + ++L+NL  LT+L
Sbjct: 120 LDLRHNKLSEIPDVIYK-------------LHTLTTLYLRFNRIKVVGDNLKNLSHLTML 166

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELP+AIG L  L +LD+S N +  +P EIG+   L   D   N L ++P ++
Sbjct: 167 SLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETI 226

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL       N +TS+P  L +C+ M + +VEGN ++ L + L+AS + LT +  S+
Sbjct: 227 GNLANLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSR 286

Query: 194 NLLNGMPE----------------------TIGSLSR---LIRLDLHQNRILSIPSSISG 228
           N  +  P                         G  SR   L +L++ +N + S+P  I  
Sbjct: 287 NAFHSYPSGGPAQFTNVTSINMEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGT 346

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
              + E   G N+L+ LP ++  L  L  L L +N LK        L +L VLDL  N L
Sbjct: 347 WTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNVLKRIPNTIGNLKKLRVLDLEENRL 406

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             LP EIG +  L+KL+L  N L +L         P  + +L                  
Sbjct: 407 ESLPSEIGLLHDLQKLILQSNQLTSL---------PRTIGHL------------------ 439

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQ 406
             T  T LSV          NL  +P EI     +  L ++ N S+ +LP EL+ C +L 
Sbjct: 440 --TNLTYLSVGEN-------NLQFLPEEIGTLENLESLYINDNASLVKLPYELALCQNLA 490

Query: 407 V 407
           +
Sbjct: 491 I 491



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 176/390 (45%), Gaps = 70/390 (17%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N++  L + L+NL  L VL++ HNKLSE+P  I +LH L +L + FN I  
Sbjct: 93  NLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKV 152

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D + + + L       N++ ELPS++G  +NL+    S+N +  LP ++ +C  ++ L
Sbjct: 153 VGDNLKNLSHLTMLSLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTAL 212

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N L                          +PETIG+L+ L+RL L  N++ SIP S
Sbjct: 213 DLQHNDLL------------------------DIPETIGNLANLMRLGLRYNQLTSIPVS 248

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYC--------------V 270
           +  C  + EF +  N +S LP   L  LS L T+ L  N    Y               +
Sbjct: 249 LKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINM 308

Query: 271 EACQLR------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS-- 316
           E  Q+             L+ L++  N+L+ LP +IG  T + +L    N L  L     
Sbjct: 309 EHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDIH 368

Query: 317 -LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            L N     L   +  R+P            + I    +L V    L LE   L ++PSE
Sbjct: 369 CLQNLEILILSNNVLKRIP------------NTIGNLKKLRV----LDLEENRLESLPSE 412

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASL 405
           I    ++ KL L  N +  LP  +    +L
Sbjct: 413 IGLLHDLQKLILQSNQLTSLPRTIGHLTNL 442



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 153/341 (44%), Gaps = 52/341 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+HN+++ L  ++ N   LT L++ HN L ++P  IG L  L  L + +N + 
Sbjct: 184 VNLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETIGNLANLMRLGLRYNQLT 243

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSL------------------------------- 133
            IP  + + T + +F+   N + +LP  L                               
Sbjct: 244 SIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNV 303

Query: 134 ------------------GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
                              R   L+      N +TSLP D+   ++M +L+   N LT L
Sbjct: 304 TSINMEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKL 363

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
            ++ I     L  LI S N+L  +P TIG+L +L  LDL +NR+ S+PS I     L + 
Sbjct: 364 PDD-IHCLQNLEILILSNNVLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKL 422

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN-SLSGLPPE 293
            + +N L++LP  +G L+ L  L +  N L+    E   L  L  L +++N SL  LP E
Sbjct: 423 ILQSNQLTSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESLYINDNASLVKLPYE 482

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +     L  + +   PL  L   +V+G    +++YL+   P
Sbjct: 483 LALCQNLAIMSIENCPLSALPPEVVSGGPSLVIQYLKLHSP 523



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 153/329 (46%), Gaps = 15/329 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S +SI  IP  +   T+LV+F    N++  LP  +G   NL     + N +TSL
Sbjct: 48  IQRLDLSKSSITIIPPSVKDCTSLVEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+ L +  ++  LD+  NKL+ +  ++I     LT L    N +  + + + +LS L  L
Sbjct: 108 PDSLQNLKQLKVLDLRHNKLSEIP-DVIYKLHTLTTLYLRFNRIKVVGDNLKNLSHLTML 166

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  +PS+I    +L    + +N L  LPAE+G    L  LDL  N L +     
Sbjct: 167 SLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETI 226

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLK 327
             L  L  L L  N L+ +P  +   T + +  + GN +  L     +SL N  T  L +
Sbjct: 227 GNLANLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSR 286

Query: 328 YLRSRLPENEDSE----ASTTKEDLITMATRLSVTSKELSLEGMN-----LSAIPSEIWE 378
                 P    ++     S   E       +  + S+   L  +N     L+++P +I  
Sbjct: 287 NAFHSYPSGGPAQFTNVTSINMEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGT 346

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQV 407
             ++ +L+   NS+ +LP ++    +L++
Sbjct: 347 WTQMVELNFGTNSLTKLPDDIHCLQNLEI 375


>gi|322510775|gb|ADX06089.1| putative leucine-rich repeat ribonuclease inhibitor family protein
           [Organic Lake phycodnavirus 1]
          Length = 598

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 184/383 (48%), Gaps = 34/383 (8%)

Query: 42  WEAVDLQKLI---------------LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           WE  DL+KL                LA+N +  + + + NL  L  L++ +N+L +LP +
Sbjct: 4   WEIEDLKKLDDLEFNKELQNVISFNLANNELSTIPDSIGNLIHLQQLDIRNNELGQLPDS 63

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG L  L+ LD+  N + ++PD IG+   L + D   N L +LP S+G  + L     + 
Sbjct: 64  IGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIEDNWLNQLPESIGNLIELEILNVNL 123

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LPE++ +  KM  L +E N+LT+L  + I     L +L  S N L+ +PE+I +L
Sbjct: 124 NRLTLLPENIGNIKKMRSLYIESNELTLLPVS-IGGLQNLEQLFTSSNRLSQIPESICNL 182

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           + L  LD+  N +  +P  I     L +  +GNN LS LP  +  L+ L  LD+  N+L 
Sbjct: 183 TNLQMLDIKDNELTQLPKHIGKLRKLKKLDIGNNELSELPESITNLTHLQMLDIGYNELS 242

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           E       L  L  L + NN L+ LP  I  +T LR L +  N L  L   + N     +
Sbjct: 243 ELPESISNLTNLQELYIENNQLTQLPESITNLTNLRMLYIHNNQLSQLPLRIGNLTHLQI 302

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLEGMNLSAIPSEIWEAGEIT 383
           L    ++L E               +  R+S     ++L ++   L+ +P  I     + 
Sbjct: 303 LAIANNKLSE---------------LPERISNLTNLQKLYIQNNQLTRLPLRIGNLTNLK 347

Query: 384 KLDLSRNSIQELPPELSSCASLQ 406
            LD+  N + ++P  +S+  +L+
Sbjct: 348 VLDIKNNQLTQIPESISNLTNLE 370



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 162/332 (48%), Gaps = 38/332 (11%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           K  +   S NL+N  L  +P             D     + LQ+L + +N + +L + + 
Sbjct: 19  KELQNVISFNLANNELSTIP-------------DSIGNLIHLQQLDIRNNELGQLPDSIG 65

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLD-----------------------VSFNS 102
           NL  L  L++ +N+L +LP +IG L  L+ LD                       V+ N 
Sbjct: 66  NLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIEDNWLNQLPESIGNLIELEILNVNLNR 125

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P+ IG+   +      SN+L  LP S+G   NL     S+N ++ +PE + + + +
Sbjct: 126 LTLLPENIGNIKKMRSLYIESNELTLLPVSIGGLQNLEQLFTSSNRLSQIPESICNLTNL 185

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD++ N+LT L  + I     L +L    N L+ +PE+I +L+ L  LD+  N +  +
Sbjct: 186 QMLDIKDNELTQLPKH-IGKLRKLKKLDIGNNELSELPESITNLTHLQMLDIGYNELSEL 244

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P SIS   +L E Y+ NN L+ LP  +  L+ L  L +H+NQL +  +    L  L +L 
Sbjct: 245 PESISNLTNLQELYIENNQLTQLPESITNLTNLRMLYIHNNQLSQLPLRIGNLTHLQILA 304

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           ++NN LS LP  I  +T L+KL +  N L  L
Sbjct: 305 IANNKLSELPERISNLTNLQKLYIQNNQLTRL 336



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 148/289 (51%), Gaps = 25/289 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           + LQ+L +  N + +L E + NL  L +LNV+ N+L+ LP  IG +  ++SL +  N + 
Sbjct: 91  IHLQQLDIEDNWLNQLPESIGNLIELEILNVNLNRLTLLPENIGNIKKMRSLYIESNELT 150

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    L +   SSN+L ++P S+    NL      +N +T LP+ +    K+ K
Sbjct: 151 LLPVSIGGLQNLEQLFTSSNRLSQIPESICNLTNLQMLDIKDNELTQLPKHIGKLRKLKK 210

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N+L+ L  + I + T L  L    N L+ +PE+I +L+ L  L +  N++  +P 
Sbjct: 211 LDIGNNELSELPES-ITNLTHLQMLDIGYNELSELPESISNLTNLQELYIENNQLTQLPE 269

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-------------CVE 271
           SI+   +L   Y+ NN LS LP  +G L+ L  L + +N+L E               ++
Sbjct: 270 SITNLTNLRMLYIHNNQLSQLPLRIGNLTHLQILAIANNKLSELPERISNLTNLQKLYIQ 329

Query: 272 ACQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
             QL            L VLD+ NN L+ +P  I  +T L  L+LT NP
Sbjct: 330 NNQLTRLPLRIGNLTNLKVLDIKNNQLTQIPESISNLTNLETLVLTNNP 378



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 38/320 (11%)

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           EL  + S +++ N +  IPD IG+   L + D  +N+L +LP S+G  ++L      NN 
Sbjct: 20  ELQNVISFNLANNELSTIPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIRNNE 79

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +  LP+ + +   + +LD+E N            W            LN +PE+IG+L  
Sbjct: 80  LGQLPDSIGNLIHLQQLDIEDN------------W------------LNQLPESIGNLIE 115

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L+++ NR+  +P +I     +   Y+ +N L+ LP  +G L  L  L   SN+L + 
Sbjct: 116 LEILNVNLNRLTLLPENIGNIKKMRSLYIESNELTLLPVSIGGLQNLEQLFTSSNRLSQI 175

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
               C L  L +LD+ +N L+ LP  IGK+  L+KL +  N L  L  S+ N     +L 
Sbjct: 176 PESICNLTNLQMLDIKDNELTQLPKHIGKLRKLKKLDIGNNELSELPESITNLTHLQMLD 235

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                +  NE SE   +  +L  +        +EL +E   L+ +P  I     +  L +
Sbjct: 236 -----IGYNELSELPESISNLTNL--------QELYIENNQLTQLPESITNLTNLRMLYI 282

Query: 388 SRNSIQELPPELSSCASLQV 407
             N + +LP  + +   LQ+
Sbjct: 283 HNNQLSQLPLRIGNLTHLQI 302



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 44/263 (16%)

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           ++ D  K+  L+       V+S NL            + N L+ +P++IG+L  L +LD+
Sbjct: 5   EIEDLKKLDDLEFNKELQNVISFNL------------ANNELSTIPDSIGNLIHLQQLDI 52

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             N +  +P SI     L +  + NN L  LP  +G L  L  LD+  N L +       
Sbjct: 53  RNNELGQLPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIEDNWLNQLPESIGN 112

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L  L +L+++ N L+ LP  IG +  +R L +  N L  L  S+  G    L        
Sbjct: 113 LIELEILNVNLNRLTLLPENIGNIKKMRSLYIESNELTLLPVSI--GGLQNL-------- 162

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITK 384
                       E L T + RLS   +          L ++   L+ +P  I +  ++ K
Sbjct: 163 ------------EQLFTSSNRLSQIPESICNLTNLQMLDIKDNELTQLPKHIGKLRKLKK 210

Query: 385 LDLSRNSIQELPPELSSCASLQV 407
           LD+  N + ELP  +++   LQ+
Sbjct: 211 LDIGNNELSELPESITNLTHLQM 233



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 60/109 (55%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L + +N + +L   + NL  L +L +++NKLSELP  I  L  L+ L +  N + +
Sbjct: 276 NLRMLYIHNNQLSQLPLRIGNLTHLQILAIANNKLSELPERISNLTNLQKLYIQNNQLTR 335

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE 154
           +P  IG+ T L   D  +NQL ++P S+    NL     +NN    +P+
Sbjct: 336 LPLRIGNLTNLKVLDIKNNQLTQIPESISNLTNLETLVLTNNPNLFIPD 384



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 2/123 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L +A+N + +L E + NL  L  L + +N+L+ LP  IG L  LK LD+  N + +I
Sbjct: 300 LQILAIANNKLSELPERISNLTNLQKLYIQNNQLTRLPLRIGNLTNLKVLDIKNNQLTQI 359

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC-SKMSKL 165
           P+ I + T L     ++N    +P  L R +N+       N +   P ++ D  +K+S  
Sbjct: 360 PESISNLTNLETLVLTNNPNLFIPDWL-RQMNIRFIHYDVNNVDVNPFEVHDVFNKISDE 418

Query: 166 DVE 168
            VE
Sbjct: 419 QVE 421


>gi|281362651|ref|NP_001163745.1| scribbled, isoform J [Drosophila melanogaster]
 gi|272477194|gb|ACZ95039.1| scribbled, isoform J [Drosophila melanogaster]
          Length = 2426

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|6782322|emb|CAB70601.1| Vartul-1 protein [Drosophila melanogaster]
          Length = 1756

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLKELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|28261017|gb|AAO32792.1| scribbled [Drosophila melanogaster]
          Length = 1850

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLKELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|24650330|ref|NP_524754.2| scribbled, isoform D [Drosophila melanogaster]
 gi|51701662|sp|Q7KRY7.1|LAP4_DROME RecName: Full=Protein lap4; AltName: Full=Protein scribble;
           AltName: Full=Protein smell-impaired
 gi|23172361|gb|AAF56598.2| scribbled, isoform D [Drosophila melanogaster]
          Length = 1851

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|386766573|ref|NP_001247320.1| scribbled, isoform O [Drosophila melanogaster]
 gi|383292968|gb|AFH06637.1| scribbled, isoform O [Drosophila melanogaster]
          Length = 2515

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|255081704|ref|XP_002508074.1| predicted protein [Micromonas sp. RCC299]
 gi|226523350|gb|ACO69332.1| predicted protein [Micromonas sp. RCC299]
          Length = 344

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 175/361 (48%), Gaps = 40/361 (11%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L  +L  L  L  LNVS N L+ LP  IG+L  L  L ++ N +  +P EIG   +L   
Sbjct: 21  LPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQLTSVPAEIGQLASLRVL 80

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D S NQL  LP+ +G    L +     N +TS+P ++   + + KL ++ N+LT +    
Sbjct: 81  DLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKLLLDDNELTSVPAE- 139

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I   T L  L  + N L  +P  IG L+ L    L  NR+ S+P+ I    SL E ++  
Sbjct: 140 IGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSGNRLASVPAEIGLLASLTELFLSG 199

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L+++PAE+G+L+ L  L L  N+L     E  QL  L VL L +N L+ +P E+G++T
Sbjct: 200 NQLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLASLMVLSLRDNELTSVPAEVGQLT 259

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
           +L+ L L GN L ++         PA +  L                    T+ T     
Sbjct: 260 SLKSLYLYGNQLTSV---------PAEIGQL--------------------TLLT----- 285

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS--CASLQVKFSDLVTNK 416
             EL L+   L+++P+EI +   + KL L  N +  +P E+     A   V+  D VT  
Sbjct: 286 --ELFLDDNELTSVPAEIGQLRSLEKLYLDDNKLTSVPAEIRELRAAGCNVELDDGVTVD 343

Query: 417 E 417
           E
Sbjct: 344 E 344



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 152/286 (53%), Gaps = 11/286 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L KL L  N +  +  ++  L  L VL++S N+L+ LPA IG L  L+ L +  N +  +
Sbjct: 54  LVKLSLTENQLTSVPAEIGQLASLRVLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTSV 113

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EI   T+L K     N+L  +P+ +G+  +L     ++N +TS+P ++   + +++  
Sbjct: 114 PAEIWQLTSLRKLLLDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESG 173

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+L  +    I     LTEL  S N L  +P  IG L+ L  L L  N + S+P   
Sbjct: 174 LSGNRLASVPAE-IGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEET 232

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL    + +N L+++PAE+G+L+ L +L L+ NQL     E  QL  L+ L L +N
Sbjct: 233 GQLASLMVLSLRDNELTSVPAEVGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDN 292

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            L+ +P EIG++ +L KL L  N L ++         PA ++ LR+
Sbjct: 293 ELTSVPAEIGQLRSLEKLYLDDNKLTSV---------PAEIRELRA 329



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 114/215 (53%), Gaps = 1/215 (0%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W+   L+KL+L  N +  +  ++  L  L VL ++ N+L+ +PA IG+L  L    +S N
Sbjct: 118 WQLTSLRKLLLDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSGN 177

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P EIG   +L +   S NQL  +P+ +G+  +L +    +N +TS+PE+    + 
Sbjct: 178 RLASVPAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLAS 237

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L +  N+LT +    +   T L  L    N L  +P  IG L+ L  L L  N + S
Sbjct: 238 LMVLSLRDNELTSVPAE-VGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDNELTS 296

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
           +P+ I    SL + Y+ +N L+++PAE+ +L   G
Sbjct: 297 VPAEIGQLRSLEKLYLDDNKLTSVPAEIRELRAAG 331



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 141/279 (50%), Gaps = 26/279 (9%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++ +LD+E   LT      +   + L EL  S+N L  +P  IG L+ L++L L +N++ 
Sbjct: 6   RVVELDLEDVDLTAALPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQLT 65

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
           S+P+ I    SL    + +N L++LPAE+G L+ L  L L+ NQL     E  QL  L  
Sbjct: 66  SVPAEIGQLASLRVLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRK 125

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L +N L+ +P EIG++T+L  L LT N L ++         PA +  L S       +
Sbjct: 126 LLLDDNELTSVPAEIGQLTSLEVLGLTDNQLTSV---------PAEIGQLASL------T 170

Query: 340 EASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
           E+  +   L ++   + + +   EL L G  L+++P+EI +   + +L L  N +  +P 
Sbjct: 171 ESGLSGNRLASVPAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPE 230

Query: 398 ELSSCASLQV---KFSDLVT-----NKESCISGCYLYWN 428
           E    ASL V   + ++L +      + + +   YLY N
Sbjct: 231 ETGQLASLMVLSLRDNELTSVPAEVGQLTSLKSLYLYGN 269


>gi|418712114|ref|ZP_13272859.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791381|gb|EKR85057.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 379

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/243 (37%), Positives = 135/243 (55%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  I +L  LKSLD++ N    +P EIG    L + +  +NQLK LP 
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     S N +T+ P+++     + KL+++ N+LT L    I     L +L  
Sbjct: 112 EIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQE-IGQLKNLQKLNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  + + IG L  L +L+L +NR+ ++P+ I    +L E Y+ NN L+ LP E+G+
Sbjct: 171 DYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQ 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L  NQL     E  QL+ L +L   NN L+ LP EIG++  L+ L L+ N L
Sbjct: 231 LKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQL 290

Query: 311 RTL 313
            TL
Sbjct: 291 TTL 293



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 154/314 (49%), Gaps = 15/314 (4%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           + + LK       LNLS++ L  +P E+              +  +L+ L LA+N  + L
Sbjct: 40  LTKALKNPLDVRVLNLSSQKLTTLPKEIK-------------QLQNLKSLDLANNQFKTL 86

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +++  L  L  LN+ +N+L  LP  IG+L  L++L +S N +   P EIG    L K +
Sbjct: 87  PKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLN 146

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
              NQL  L   +G+  NL       N +T+L +++     + KL+++ N+L  L N  I
Sbjct: 147 LDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNE-I 205

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                L EL  S N L  +PE IG L  L  L L  N++  +P  I    +L   Y  NN
Sbjct: 206 GQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNN 265

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L+ LP E+G+L KL  L L  NQL     E  QL  L  L L++N L+ LP EIG++  
Sbjct: 266 ELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKN 325

Query: 300 LRKLLLTGNPLRTL 313
           L+  +   N L  L
Sbjct: 326 LQTFISFNNQLTML 339



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 143/277 (51%), Gaps = 15/277 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL N  L+++P E+              +  +LQ LIL+ N +    +++  L  L  
Sbjct: 98  ELNLWNNQLKNLPKEI-------------GQLQNLQTLILSVNRLTTFPQEIGQLKNLQK 144

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+ +N+L+ L   IG+L  L+ L++ +N +  +  EIG    L K +   N+LK LP+ 
Sbjct: 145 LNLDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNE 204

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +   SNN +T LPE++     +  L +  N+LT+L    I     L  L + 
Sbjct: 205 IGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKE-IGQLQNLKLLYSV 263

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG L +L  L L  N++ ++P  I    +L E Y+ +N L+ LP E+G+L
Sbjct: 264 NNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQL 323

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
             L T    +NQL     E  QL+ L  L L+NN LS
Sbjct: 324 KNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLS 360



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 127/282 (45%), Gaps = 38/282 (13%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP+++     +  LD+  N+   L    I     L EL    N
Sbjct: 51  RVLNLSSQK-----LTTLPKEIKQLQNLKSLDLANNQFKTLPKE-IGQLQNLQELNLWNN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+ IG L  L  L L  NR+ + P  I    +L +  +  N L+ L  E+G+L  
Sbjct: 105 QLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKN 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L  NQL     E  QL+ L  L+L  N L  LP EIG++  L++L L+ N L  L
Sbjct: 165 LQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTIL 224

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS-------LEG 366
              +        LK L++                LI    +L++  KE+        L  
Sbjct: 225 PEEI------GQLKNLQA----------------LILGDNQLTILPKEIGQLQNLKLLYS 262

Query: 367 MN--LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +N  L+ +P EI +  ++  L LS N +  LP E+    +LQ
Sbjct: 263 VNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQ 304



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 99/218 (45%), Gaps = 18/218 (8%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ I  L  L  LDL  N+  ++P  I    +L E  + NN L  LP E+G+L  L
Sbjct: 60  LTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNL 119

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            TL L  N+L  +  E  QL+ L  L+L  N L+ L  EIG++  L+KL L  N L TL 
Sbjct: 120 QTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTLL 179

Query: 315 SSLVNGPTPALLKYLRSRLPE--NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
             +        L   ++RL    NE  +    +E               L L    L+ +
Sbjct: 180 QEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQE---------------LYLSNNQLTIL 224

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFS 410
           P EI +   +  L L  N +  LP E+    +L++ +S
Sbjct: 225 PEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYS 262


>gi|281362655|ref|NP_001163746.1| scribbled, isoform L [Drosophila melanogaster]
 gi|272477196|gb|ACZ95040.1| scribbled, isoform L [Drosophila melanogaster]
          Length = 2585

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|195349707|ref|XP_002041384.1| GM10328 [Drosophila sechellia]
 gi|194123079|gb|EDW45122.1| GM10328 [Drosophila sechellia]
          Length = 1851

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+LS     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLS----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LSNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|386766577|ref|NP_001247321.1| scribbled, isoform Q [Drosophila melanogaster]
 gi|383292970|gb|AFH06638.1| scribbled, isoform Q [Drosophila melanogaster]
          Length = 2577

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|195504035|ref|XP_002098907.1| GE23676 [Drosophila yakuba]
 gi|194185008|gb|EDW98619.1| GE23676 [Drosophila yakuba]
          Length = 1857

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+LS     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLS----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LSNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|432848516|ref|XP_004066384.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oryzias
           latipes]
          Length = 582

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/398 (30%), Positives = 194/398 (48%), Gaps = 56/398 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P  VY+                L  L L  N I  +++D+RNL  LT+L
Sbjct: 174 LDLRHNKLREIPAVVYR-------------LTSLTTLYLRFNRITTVEKDIRNLSKLTML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +++      N ++++P  LA C ++ +L++E N ++VL   L++S   LT L  ++
Sbjct: 281 GNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  N I  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYSLNMEHNHINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   + C L  L VL LSNN L  LP  IG +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLAKIPEDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L  L         P  + YL+                DL           ++L L    
Sbjct: 459 KLECL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L+ +P  I     +T L L  N +Q LP E+ +  +L+
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLE 520



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 3/200 (1%)

Query: 52  LAHNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI 110
           + HN+I K+   +     +L+ LN+  N+L+ LP   G    +  L+++ N + KIP+++
Sbjct: 362 MEHNHINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPEDV 421

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
               +L     S+N LK+LP  +G    L +     N +  LP ++A    + KL +  N
Sbjct: 422 CGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTNN 481

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN-RILSIPSSISGC 229
           +LT L    I   T LT L   +NLL  +PE IG+L  L  L L+ N  + S+P  ++ C
Sbjct: 482 QLTTLPRG-IGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 230 CSLAEFYMGNNALSALPAEL 249
             LA   + N  L+ LPA++
Sbjct: 541 SKLAIMSIENCPLTHLPAQI 560



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LP+S+     L++    +N + SLP ++   S +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHMLPTSIKELNQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  S   L  L    N L  +P  +  L+ L  L L  NRI ++   I     L    
Sbjct: 163 DSL-DSLKKLRMLDLRHNKLREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            + ++ +L L  N L  +  SL 
Sbjct: 282 NLASINRLGLRYNRLSAIPRSLA 304



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 95/197 (48%), Gaps = 14/197 (7%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +P+SI     LAE Y+ +N L +LPAE+G LS L TL L  N L    
Sbjct: 103 MRLDLSKRSIHMLPTSIKELNQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLP 162

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L +L +LDL +N L  +P  + ++T+L  L L  N + T+   + N     L K 
Sbjct: 163 DSLDSLKKLRMLDLRHNKLREIPAVVYRLTSLTTLYLRFNRITTVEKDIRN-----LSKL 217

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               + EN+  +      +L  + T        L +    L  +P EI    +IT LDL 
Sbjct: 218 TMLSIRENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCTQITNLDLQ 269

Query: 389 RNSIQELPPELSSCASL 405
            N + +LP  + + AS+
Sbjct: 270 HNELLDLPETIGNLASI 286



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 87/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLAKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +  LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK++ + +E   LT L   ++A
Sbjct: 541 SKLAIMSIENCPLTHLPAQIVA 562


>gi|386766579|ref|NP_001247322.1| scribbled, isoform R [Drosophila melanogaster]
 gi|383292971|gb|AFH06639.1| scribbled, isoform R [Drosophila melanogaster]
          Length = 1951

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|281362657|ref|NP_001163747.1| scribbled, isoform M [Drosophila melanogaster]
 gi|272477197|gb|ACZ95041.1| scribbled, isoform M [Drosophila melanogaster]
          Length = 2490

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|116007092|ref|NP_001014670.2| scribbled, isoform H [Drosophila melanogaster]
 gi|113194844|gb|AAX52995.2| scribbled, isoform H [Drosophila melanogaster]
          Length = 1939

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|194907948|ref|XP_001981667.1| GG11485 [Drosophila erecta]
 gi|190656305|gb|EDV53537.1| GG11485 [Drosophila erecta]
          Length = 1855

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 169/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+LS     L+++   L  +P EI +   +  L L  N ++ LPPEL +C
Sbjct: 309 ------IGQMTKLS----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LSNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|195036246|ref|XP_001989582.1| GH18723 [Drosophila grimshawi]
 gi|193893778|gb|EDV92644.1| GH18723 [Drosophila grimshawi]
          Length = 1864

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTSLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N +      LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEM-GGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELILTENFLSELPASIGRMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 171/362 (47%), Gaps = 38/362 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +TSLP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTSLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEMGGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L N      L      L EN  SE   + 
Sbjct: 255 LLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELI-----LTENFLSELPAS- 308

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I   T+LS     L+++   L  +P EI +   +  L L  N +++LPPEL +C  L
Sbjct: 309 ---IGRMTKLS----NLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 406 QV 407
            V
Sbjct: 362 HV 363



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 132/239 (55%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +G  ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEMGGLVSLTDLDLAQNLLETLPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCDNMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCSNLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391


>gi|195451908|ref|XP_002073128.1| GK13318 [Drosophila willistoni]
 gi|194169213|gb|EDW84114.1| GK13318 [Drosophila willistoni]
          Length = 1874

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGSCENMQELILTENFLSELPASIGRMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 173/362 (47%), Gaps = 38/362 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLQRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP  I K++ L  L L  N L+ L  +L  G    + + +   L EN  SE   + 
Sbjct: 255 LLETLPDGIAKLSRLTILKLDQNRLQRLNDTL--GSCENMQELI---LTENFLSELPAS- 308

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I   T+LS     L+++   L  +P EI +   +  L L  N +++LPPEL +C  L
Sbjct: 309 ---IGRMTKLS----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 406 QV 407
            V
Sbjct: 362 HV 363



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLQRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L  LP  + KLS+L  L L  N+L+     + +C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LETLPDGIAKLSRLTILKLDQNRLQRLNDTLGSCE-NMQELILTENFLSELPASIGRMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LSNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + S   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGSCENMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLETLPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGSCENMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W    +
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSENQ 392

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 393 ---SQPLLTFQPDT 403


>gi|418687360|ref|ZP_13248519.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410737684|gb|EKQ82423.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 402

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 151/291 (51%), Gaps = 23/291 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L +N +  L  ++  L  L VL++  N+L+ LP  IG+L  L+ L++ FN +  
Sbjct: 72  NLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PDE+G    L   +   N+L  LP  +G+  NL       N +T LPE +     +  L
Sbjct: 132 LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQIL 191

Query: 166 DVEGNKLTVLS---------NNLIASWTMLT----ELIASKNL---------LNGMPETI 203
           + +GN+LT              L   +  LT    E++  +NL         L  +P+ I
Sbjct: 192 NSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEI 251

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G LS+L +L L+ N++ ++P  I     L E Y+GNN L  LP E+ +L KL TL L  N
Sbjct: 252 GQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGN 311

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           Q+  +  E  QL+ L  L+L  N L+ LP EIG++  L++L L  N L TL
Sbjct: 312 QITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATL 362



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 171/341 (50%), Gaps = 37/341 (10%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEV---------YKNFDEAGE-GDKWWEAVDLQKLILAH 54
           L+  + +  LNLS   L  +  E+         Y N+++     ++  +  +LQ L L  
Sbjct: 44  LQNPKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYS 103

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N +  L +++  L  L VLN+  N+L+ LP  +G+L  L+ L++  N +  +P++IG   
Sbjct: 104 NELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQ 163

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L   +   N+L  LP  +G+  NL    +  N +T+ P+++    K+ +L++  N+LT 
Sbjct: 164 NLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTT 223

Query: 175 LSNNLIASWTM-LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
           L   ++    + + +LI+  N L  +P+ IG LS+L +L L+ N++ ++P  I     L 
Sbjct: 224 LREEVVQLQNLQILDLIS--NPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQ 281

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----------------- 276
           E Y+GNN L  LP E+ +L KL TL L  NQ+  +  E  QL+                 
Sbjct: 282 ELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQ 341

Query: 277 -------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
                  L  L+L  N L+ LP E+G++  LRKL L  NP+
Sbjct: 342 EIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPI 382



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 166/348 (47%), Gaps = 43/348 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +LN+S +KL+ L   IG+L  L+ L +++N +  +P+EIG    L   D  SN+L  LP 
Sbjct: 52  ILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +T LP+++     +  L+++ NKLT+L                
Sbjct: 112 EIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTIL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   PE IG L  L  L+L  N++  +P  I    +L       N L+  P E+G+
Sbjct: 156 --------PEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L+L  N+L     E  QL+ L +LDL +N L+ LP EIG+++ L+KL L GN L
Sbjct: 208 LQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQL 267

Query: 311 RTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
            TL   +        LK L+   L  N         E L  + T        L LEG  +
Sbjct: 268 TTLPEEI------GQLKKLQELYLGNNPLRTLPKEIEQLQKLQT--------LYLEGNQI 313

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ---VKFSDLVT 414
           +  P EI +   + +L+L  N +  LP E+    +LQ   ++F+ L T
Sbjct: 314 TTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLAT 361



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 177/367 (48%), Gaps = 20/367 (5%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           + Y+N  EA +  K     D + L L+ + +  L +++  L  L  L +++N+L+ LP  
Sbjct: 35  QTYRNLTEALQNPK-----DARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNE 89

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG+L  L+ LD+  N +  +P EIG    L   +   N+L  LP  +G+  NL       
Sbjct: 90  IGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDL 149

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LPE +     +  L+++ NKLT+L    I     L  L +  N L   P+ IG L
Sbjct: 150 NKLTILPEKIGQLQNLQVLNLDLNKLTILPEK-IGQLQNLQILNSQGNQLTTFPKEIGQL 208

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
            +L  L+L  NR+ ++   +    +L    + +N L+ LP E+G+LSKL  L L+ NQL 
Sbjct: 209 QKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLT 268

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
               E  QL +L  L L NN L  LP EI ++  L+ L L GN + T          P  
Sbjct: 269 TLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTF---------PKE 319

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           +  L++    N      TT    I     L    +EL+LE   L+ +P E+ +  ++ KL
Sbjct: 320 IGQLQNLQELNLGFNQLTTLPQEIGQLQNL----QELNLEFNQLATLPKEVGQLQKLRKL 375

Query: 386 DLSRNSI 392
           +L  N I
Sbjct: 376 NLYNNPI 382



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L L +N +  L +++  L  L  L +  N+++  P  IG+L  L+ L++ FN +  +
Sbjct: 280 LQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTL 339

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           P EIG    L + +   NQL  LP  +G+   L      NN I S
Sbjct: 340 PQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIAS 384


>gi|405965662|gb|EKC31024.1| Protein lap4 [Crassostrea gigas]
          Length = 1780

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 160/299 (53%), Gaps = 25/299 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L ++ ++ N+I  + E+++ L  L VL++S N L++LP    +L  L  L ++  S+M
Sbjct: 83  VNLMEMDISRNDIGDIPENIKFLKNLQVLDISSNPLTKLPEGFTQLRNLTHLGLNDISLM 142

Query: 105 KIPDEIGSATALVK-----------------------FDCSSNQLKELPSSLGRCLNLSD 141
           ++P +IGS T LV                         D  SN +KELP  +G   +L +
Sbjct: 143 RLPPDIGSLTNLVSLELRENMIQFLPQSMSLLVKLEILDLGSNNIKELPEIIGSLPSLQE 202

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
                N +  LP ++ +  K++++DV  N+LT + +  I     LT+L  S+N L  +PE
Sbjct: 203 LWLDCNELQDLPPEIGNLRKLTQIDVSENQLTYIPDE-ICGLQNLTDLCLSQNDLEDIPE 261

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IGSL +L  L L QN++  +P  I  C SL E  +  N L  LP+ +G+L  L  L++ 
Sbjct: 262 GIGSLKKLSILKLDQNKLGFLPQEIGNCESLTELILTENYLEELPSTIGRLRLLSNLNVD 321

Query: 262 SNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            NQLKE  VE  Q +RL+V+ L +N L  LP E+G +  L  L ++GN L  L  ++ N
Sbjct: 322 RNQLKEIPVEIGQCVRLNVVSLRDNRLLRLPQELGNLKELHVLDVSGNKLEYLPITITN 380



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 124/241 (51%), Gaps = 1/241 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L  L L  N I+ L + +  L  L +L++  N + ELP  IG L  L+ L +  N + 
Sbjct: 152 TNLVSLELRENMIQFLPQSMSLLVKLEILDLGSNNIKELPEIIGSLPSLQELWLDCNELQ 211

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG+   L + D S NQL  +P  +    NL+D   S N +  +PE +    K+S 
Sbjct: 212 DLPPEIGNLRKLTQIDVSENQLTYIPDEICGLQNLTDLCLSQNDLEDIPEGIGSLKKLSI 271

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L ++ NKL  L    I +   LTELI ++N L  +P TIG L  L  L++ +N++  IP 
Sbjct: 272 LKLDQNKLGFLPQE-IGNCESLTELILTENYLEELPSTIGRLRLLSNLNVDRNQLKEIPV 330

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I  C  L    + +N L  LP ELG L +L  LD+  N+L+   +    L L+ L LS 
Sbjct: 331 EIGQCVRLNVVSLRDNRLLRLPQELGNLKELHVLDVSGNKLEYLPITITNLHLNALWLSE 390

Query: 285 N 285
           N
Sbjct: 391 N 391



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 179/397 (45%), Gaps = 53/397 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D +L+  R+   L L    L+D+P    K F         +  V L+KL L+ N I +L 
Sbjct: 30  DDVLRYTRSLEELLLDANQLKDLP----KGF---------FRLVQLRKLSLSDNEIARLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ NL  L  +++S N + ++P  I  L  L+ LD+S N + K+P+       L     
Sbjct: 77  PEVANLVNLMEMDISRNDIGDIPENIKFLKNLQVLDISSNPLTKLPEGFTQLRNLTHLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP  +G   NL   +   N I  LP+ ++   K+  LD+  N +  L   +I 
Sbjct: 137 NDISLMRLPPDIGSLTNLVSLELRENMIQFLPQSMSLLVKLEILDLGSNNIKELPE-IIG 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           S   L EL    N L  +P  IG+L +L ++D+ +N++  IP  I G  +L +  +  N 
Sbjct: 196 SLPSLQELWLDCNELQDLPPEIGNLRKLTQIDVSENQLTYIPDEICGLQNLTDLCLSQND 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +G L KL                      S+L L  N L  LP EIG   +L 
Sbjct: 256 LEDIPEGIGSLKKL----------------------SILKLDQNKLGFLPQEIGNCESLT 293

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA--TRLSVTS 359
           +L+LT N L  L S++            R RL  N + + +  KE  + +    RL+V  
Sbjct: 294 ELILTENYLEELPSTIG-----------RLRLLSNLNVDRNQLKEIPVEIGQCVRLNV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
             +SL    L  +P E+    E+  LD+S N ++ LP
Sbjct: 341 --VSLRDNRLLRLPQELGNLKELHVLDVSGNKLEYLP 375



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 147/331 (44%), Gaps = 38/331 (11%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           N+L +LP     L  L+ L +S N I ++P E+ +   L++ D S N + ++P ++    
Sbjct: 47  NQLKDLPKGFFRLVQLRKLSLSDNEIARLPPEVANLVNLMEMDISRNDIGDIPENIKFLK 106

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           NL     S+N +T LPE       ++ L +    L  L  + I S T L  L   +N++ 
Sbjct: 107 NLQVLDISSNPLTKLPEGFTQLRNLTHLGLNDISLMRLPPD-IGSLTNLVSLELRENMIQ 165

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +P+++  L +L  LDL  N I  +P  I    SL E ++  N L  LP E+G L KL  
Sbjct: 166 FLPQSMSLLVKLEILDLGSNNIKELPEIIGSLPSLQELWLDCNELQDLPPEIGNLRKLTQ 225

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           +D+  NQL     E C L+ L+ L LS N L  +P  IG +  L  L L  N L  L   
Sbjct: 226 IDVSENQLTYIPDEICGLQNLTDLCLSQNDLEDIPEGIGSLKKLSILKLDQNKLGFLPQE 285

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           + N                    E+ T                 EL L    L  +PS I
Sbjct: 286 IGN-------------------CESLT-----------------ELILTENYLEELPSTI 309

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQV 407
                ++ L++ RN ++E+P E+  C  L V
Sbjct: 310 GRLRLLSNLNVDRNQLKEIPVEIGQCVRLNV 340



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 127/272 (46%), Gaps = 29/272 (10%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           +C+ L  FKA N  +  +  D   CS           LT + ++++     L EL+   N
Sbjct: 3   KCIPL--FKACNRQVDYI--DRRHCS-----------LTDVPDDVLRYTRSLEELLLDAN 47

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+    L +L +L L  N I  +P  ++   +L E  +  N +  +P  +  L  
Sbjct: 48  QLKDLPKGFFRLVQLRKLSLSDNEIARLPPEVANLVNLMEMDISRNDIGDIPENIKFLKN 107

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LD+ SN L +      QLR L+ L L++ SL  LPP+IG +T L  L L  N ++ L
Sbjct: 108 LQVLDISSNPLTKLPEGFTQLRNLTHLGLNDISLMRLPPDIGSLTNLVSLELRENMIQFL 167

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
             S+      +LL  L     E  D  ++  KE    + +  S+  +EL L+   L  +P
Sbjct: 168 PQSM------SLLVKL-----EILDLGSNNIKELPEIIGSLPSL--QELWLDCNELQDLP 214

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            EI    ++T++D+S N +  +P E+    +L
Sbjct: 215 PEIGNLRKLTQIDVSENQLTYIPDEICGLQNL 246


>gi|410451738|ref|ZP_11305740.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014504|gb|EKO76634.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 438

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 165/338 (48%), Gaps = 20/338 (5%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ +P  IGEL  L+ LD+ FN I  +P+EIG   +L+  + S NQL  +P  
Sbjct: 65  LNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVLPNEIGQLQSLLDLNLSFNQLTTIPKE 124

Query: 133 LGRCLNLSD-FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           +G   +L   F   N+ + +LP+++     + ++D   N+L  L    I     L  L  
Sbjct: 125 IGELQHLQRLFLGFNHQLIALPKEIGKLQNLQEMDSSRNQLITLPKE-IGELQHLQRLFL 183

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N L  +P+ IG+L  L RLDL +N++ +IP  I    SL    +  N L  +P E+GK
Sbjct: 184 NFNQLTTVPQEIGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQGLTLSFNQLRTIPKEIGK 243

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L SN L     E   L+ L VL L +N L+ +P EIG + +L+ L L  N L
Sbjct: 244 LQNLQGLTLTSNGLATIPKEIGNLQNLKVLYLDHNKLATIPQEIGNLQSLQVLTLDRNLL 303

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMN 368
                     P P  +  L++          + T   L T+   +      KEL+L    
Sbjct: 304 ---------APLPKEIGKLQNL------QRLALTVNALTTLPKEIGNLQNLKELNLTSNR 348

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L+ +P EI +   + +L L  N ++ LP E+    SL+
Sbjct: 349 LTTLPKEIGKLQNLQELHLDYNQLKTLPKEIGKLQSLE 386



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 181/366 (49%), Gaps = 20/366 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  + +++  L  L  L++  NK++ LP  IG+L  L  L++SFN +  
Sbjct: 61  NLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVLPNEIGQLQSLLDLNLSFNQLTT 120

Query: 106 IPDEIGSATALVK-FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           IP EIG    L + F   ++QL  LP  +G+  NL +  +S N + +LP+++ +   + +
Sbjct: 121 IPKEIGELQHLQRLFLGFNHQLIALPKEIGKLQNLQEMDSSRNQLITLPKEIGELQHLQR 180

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT +    I +   L  L   KN L  +P+ IG L  L  L L  N++ +IP 
Sbjct: 181 LFLNFNQLTTVPQE-IGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQGLTLSFNQLRTIPK 239

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    + +N L+ +P E+G L  L  L L  N+L     E   L+ L VL L 
Sbjct: 240 EIGKLQNLQGLTLTSNGLATIPKEIGNLQNLKVLYLDHNKLATIPQEIGNLQSLQVLTLD 299

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP EIGK+  L++L LT N L TL   + N      L+ L+         E + 
Sbjct: 300 RNLLAPLPKEIGKLQNLQRLALTVNALTTLPKEIGN------LQNLK---------ELNL 344

Query: 344 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
           T   L T+   +      +EL L+   L  +P EI +   +  L+L+ N +   P E+  
Sbjct: 345 TSNRLTTLPKEIGKLQNLQELHLDYNQLKTLPKEIGKLQSLEYLNLNGNPLTSFPEEIGK 404

Query: 402 CASLQV 407
             +L+V
Sbjct: 405 LQNLKV 410



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 146/272 (53%), Gaps = 4/272 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ++  + N +  L +++  L  L  L ++ N+L+ +P  IG L  L+ LD+  N +  
Sbjct: 154 NLQEMDSSRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQLTT 213

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP EIG   +L     S NQL+ +P  +G+  NL     ++N + ++P+++ +   +  L
Sbjct: 214 IPKEIGQLQSLQGLTLSFNQLRTIPKEIGKLQNLQGLTLTSNGLATIPKEIGNLQNLKVL 273

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ NKL  +    I +   L  L   +NLL  +P+ IG L  L RL L  N + ++P  
Sbjct: 274 YLDHNKLATIPQE-IGNLQSLQVLTLDRNLLAPLPKEIGKLQNLQRLALTVNALTTLPKE 332

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E  + +N L+ LP E+GKL  L  L L  NQLK    E  +L+ L  L+L+ 
Sbjct: 333 IGNLQNLKELNLTSNRLTTLPKEIGKLQNLQELHLDYNQLKTLPKEIGKLQSLEYLNLNG 392

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           N L+  P EIGK+  L+ L L GNP  +LRS 
Sbjct: 393 NPLTSFPEEIGKLQNLKVLSLVGNP--SLRSQ 422



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 128/293 (43%), Gaps = 62/293 (21%)

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            ++ +L  LP  +G+  NL      +N +T++P+++ +   + KLD+  NK+TVL     
Sbjct: 44  LNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVL----- 98

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG-N 239
                              P  IG L  L+ L+L  N++ +IP  I     L   ++G N
Sbjct: 99  -------------------PNEIGQLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFN 139

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           + L ALP E+GKL  L  +D   NQL     E  +L+ L  L L+ N L+ +P EIG + 
Sbjct: 140 HQLIALPKEIGKLQNLQEMDSSRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQ 199

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L++L L  N L T+         P  +  L+S                           
Sbjct: 200 NLQRLDLDKNQLTTI---------PKEIGQLQSL-------------------------- 224

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
            + L+L    L  IP EI +   +  L L+ N +  +P E+ +  +L+V + D
Sbjct: 225 -QGLTLSFNQLRTIPKEIGKLQNLQGLTLTSNGLATIPKEIGNLQNLKVLYLD 276



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 14/202 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LS   LR +P E+ K               +LQ L L  N +  + +++ NL  L V
Sbjct: 226 GLTLSFNQLRTIPKEIGK-------------LQNLQGLTLTSNGLATIPKEIGNLQNLKV 272

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + HNKL+ +P  IG L  L+ L +  N +  +P EIG    L +   + N L  LP  
Sbjct: 273 LYLDHNKLATIPQEIGNLQSLQVLTLDRNLLAPLPKEIGKLQNLQRLALTVNALTTLPKE 332

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL +   ++N +T+LP+++     + +L ++ N+L  L    I     L  L  +
Sbjct: 333 IGNLQNLKELNLTSNRLTTLPKEIGKLQNLQELHLDYNQLKTLPKE-IGKLQSLEYLNLN 391

Query: 193 KNLLNGMPETIGSLSRLIRLDL 214
            N L   PE IG L  L  L L
Sbjct: 392 GNPLTSFPEEIGKLQNLKVLSL 413



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 43/186 (23%)

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 293
            Y+    L+ALP E+G+L  L  L+L  NQL     E  +L+ L  LDL  N ++ LP E
Sbjct: 42  LYLNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVLPNE 101

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           IG++ +L  L L+ N L T+   +        L++L+                       
Sbjct: 102 IGQLQSLLDLNLSFNQLTTIPKEI------GELQHLQ----------------------- 132

Query: 354 RLSVTSKELSLEGMN--LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ---VK 408
           RL +        G N  L A+P EI +   + ++D SRN +  LP E+     LQ   + 
Sbjct: 133 RLFL--------GFNHQLIALPKEIGKLQNLQEMDSSRNQLITLPKEIGELQHLQRLFLN 184

Query: 409 FSDLVT 414
           F+ L T
Sbjct: 185 FNQLTT 190


>gi|218441805|ref|YP_002380134.1| Miro domain-containing protein [Cyanothece sp. PCC 7424]
 gi|218174533|gb|ACK73266.1| Miro domain protein [Cyanothece sp. PCC 7424]
          Length = 1015

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 175/357 (49%), Gaps = 41/357 (11%)

Query: 1   MDRILKAARTSGSL-NLSNR-------SLRDVPNEV---------YKNFDEAGEGDKW-W 42
           +DRI +A     +L +LSN+        L ++P EV         Y N++      ++ +
Sbjct: 9   LDRIQQAKEKRLTLLDLSNKWDTKEEYKLTEIPEEVFELEWLEVLYLNYNNLSCISEYIY 68

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
             ++L++L L  NN+  L   + +L  LT L++SHN+L+ LP ++  L  L  LD+SFN 
Sbjct: 69  CLINLKELYLYCNNLTILSNHITDLVNLTKLDLSHNQLTSLPDSLTHLVNLTKLDLSFNQ 128

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +PD +     L   D   NQL  LP SL R +NL+      N +TSLP+ L     +
Sbjct: 129 LTSLPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNL 188

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             L +  N+L+ L N+L      LTEL  S N L  +P+++  L  L  LDL  N++ S 
Sbjct: 189 IYLYLGRNQLSSLLNSL-TRLVNLTELDLSFNQLTSLPDSLTPLVNLTELDLSDNQLSSF 247

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL 282
           P S++   +L E Y+  N LS+LP  L +L+K                      LS L+L
Sbjct: 248 PDSLTSLVNLTELYLTGNQLSSLPDSLTRLAK----------------------LSRLNL 285

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           S N LS LP  + ++  L  L L GNPL T    +      A+ +Y R +  E ED+
Sbjct: 286 SRNQLSNLPDSLTRLVNLTYLYLKGNPLETPPLEIAQQGIEAIREYFRQKQQEGEDT 342



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 148/327 (45%), Gaps = 59/327 (18%)

Query: 79  KLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLN 138
           KL+E+P  + EL  L+ L +++N++  I + I     L +     N L  L + +   +N
Sbjct: 36  KLTEIPEEVFELEWLEVLYLNYNNLSCISEYIYCLINLKELYLYCNNLTILSNHITDLVN 95

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           L+    S+N +TSLP+ L     ++KLD+  N+LT L ++L      LT L    N L  
Sbjct: 96  LTKLDLSHNQLTSLPDSLTHLVNLTKLDLSFNQLTSLPDSL-TRLVNLTYLDLRGNQLTS 154

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P+++  L  L  LDL  N++ S+P S++   +L   Y+G N LS+L   L +L      
Sbjct: 155 LPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNLIYLYLGRNQLSSLLNSLTRL------ 208

Query: 259 DLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
                           + L+ LDLS N L+ LP  +  +  L +L L+ N L +   SL 
Sbjct: 209 ----------------VNLTELDLSFNQLTSLPDSLTPLVNLTELDLSDNQLSSFPDSLT 252

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
           +                            L+ +         EL L G  LS++P  +  
Sbjct: 253 S----------------------------LVNLT--------ELYLTGNQLSSLPDSLTR 276

Query: 379 AGEITKLDLSRNSIQELPPELSSCASL 405
             ++++L+LSRN +  LP  L+   +L
Sbjct: 277 LAKLSRLNLSRNQLSNLPDSLTRLVNL 303


>gi|75907715|ref|YP_322011.1| small GTP-binding protein domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701440|gb|ABA21116.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
           29413]
          Length = 1107

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 153/277 (55%), Gaps = 2/277 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L L+ N I ++ E + NL  LT L +  N+++E+P AI  L  L  LD+  N I +
Sbjct: 150 NLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLTQLDLGDNQITE 209

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP  I + T L + D   NQ+ E+P ++    NL+     +N IT +PE +A+ + + +L
Sbjct: 210 IPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTHLILFSNQITEIPEAIANLTNLMQL 269

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N++T +    IA+ T LT+L+ S N +  +PE I +L+ L +LDL  N+I  IP +
Sbjct: 270 DLSYNQITEIP-KAIANLTNLTQLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEIPET 328

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I+   +L E Y   N ++ +   + KL+ L  L L SNQ+ +       L  L+ L L+ 
Sbjct: 329 IANLTNLTELYFNYNKITQIAEAIAKLTNLTELHLSSNQITQIPEAIANLTNLTELYLNY 388

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N ++ +   I K+T L +L L GN +  +  +L + P
Sbjct: 389 NKITQIAEAIAKLTNLTELHLDGNQITQIPEALESLP 425



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 185/366 (50%), Gaps = 19/366 (5%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + + L++LIL    I ++ E + NL  LT L +  N+++E P AI +L  L  LD+S N 
Sbjct: 101 QILHLEELILIRVEITEIPEAIANLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQ 160

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           I +IP+ I + T L      SNQ+ E+P ++    NL+     +N IT +P+ +A+ + +
Sbjct: 161 ITEIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNL 220

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           ++LD+  N++T +    IA+ T LT LI   N +  +PE I +L+ L++LDL  N+I  I
Sbjct: 221 TQLDLGDNQITEIP-KAIANLTNLTHLILFSNQITEIPEAIANLTNLMQLDLSYNQITEI 279

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P +I+   +L +  + +N ++ +P  +  L+ L  LDL  N++ E       L  L+ L 
Sbjct: 280 PKAIANLTNLTQLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEIPETIANLTNLTELY 339

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN--GPTPALLKYLRSRLPENEDS 339
            + N ++ +   I K+T L +L L+ N +  +  ++ N    T   L Y           
Sbjct: 340 FNYNKITQIAEAIAKLTNLTELHLSSNQITQIPEAIANLTNLTELYLNY----------- 388

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
              T   + I   T L+    EL L+G  ++ IP  +    ++ KLDL  N +   P  L
Sbjct: 389 NKITQIAEAIAKLTNLT----ELHLDGNQITQIPEALESLPKLEKLDLRGNPLPISPEIL 444

Query: 400 SSCASL 405
            S   +
Sbjct: 445 GSVYEV 450



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 149/275 (54%), Gaps = 4/275 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L L  N I ++ + + NL  LT L++  N+++E+P AI  L  L  L +  N I +
Sbjct: 196 NLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTHLILFSNQITE 255

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ I + T L++ D S NQ+ E+P ++    NL+    S+N IT +PE +A+ + +++L
Sbjct: 256 IPEAIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIPEAIANLTNLTQL 315

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  NK+T +    IA+ T LTEL  + N +  + E I  L+ L  L L  N+I  IP +
Sbjct: 316 DLSDNKITEIPET-IANLTNLTELYFNYNKITQIAEAIAKLTNLTELHLSSNQITQIPEA 374

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLS 283
           I+   +L E Y+  N ++ +   + KL+ L  L L  NQ+ +   EA +   +L  LDL 
Sbjct: 375 IANLTNLTELYLNYNKITQIAEAIAKLTNLTELHLDGNQITQ-IPEALESLPKLEKLDLR 433

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            N L   P  +G +  +  +    N LR LRS  V
Sbjct: 434 GNPLPISPEILGSVYEVGSVEEIFNYLRLLRSGEV 468



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 165/352 (46%), Gaps = 56/352 (15%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSL------------------DVSFNSIMKIPDEIGSAT 114
           L++S  +L+ELP  IG+L  L+SL                   VS N++  +P E+    
Sbjct: 21  LDLSGQELTELPGEIGKLQQLESLILGKQVGGYEWVGDRYLKKVSGNNLKTLPLELLGLP 80

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L K D S N L+ +P  + + L+L +       IT +PE +A+ + ++ L +  N++T 
Sbjct: 81  NLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEAIANLTNLTHLILFSNQITE 140

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
            +   IA  T LT+L  S N +  +PE I +L+ L  L L  N+I  IP +I+   +L +
Sbjct: 141 -TPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLTQ 199

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
             +G+N ++ +P  +  L+ L  LDL  NQ+ E       L  L+ L L +N ++ +P  
Sbjct: 200 LDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTHLILFSNQITEIPEA 259

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           I  +T L +L L+ N +  +  ++ N                             +T  T
Sbjct: 260 IANLTNLMQLDLSYNQITEIPKAIAN-----------------------------LTNLT 290

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +L ++  +++        IP  I     +T+LDLS N I E+P  +++  +L
Sbjct: 291 QLVLSDNKIT-------EIPEAIANLTNLTQLDLSDNKITEIPETIANLTNL 335


>gi|198451591|ref|XP_001358430.2| GA18897 [Drosophila pseudoobscura pseudoobscura]
 gi|198131558|gb|EAL27569.2| GA18897 [Drosophila pseudoobscura pseudoobscura]
          Length = 1889

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LT+L
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFTQLKNLTIL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELILTENFLSELPASIGRMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 169/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLNRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFTQLKNLTILGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+LS     L+++   L  +P EI +   +  L L  N ++ LPPEL +C
Sbjct: 309 ------IGRMTKLS----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCDNMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLETLPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCDNMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|442621260|ref|NP_001262988.1| scribbled, isoform T [Drosophila melanogaster]
 gi|440217925|gb|AGB96368.1| scribbled, isoform T [Drosophila melanogaster]
          Length = 2444

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|386766571|ref|NP_001247319.1| scribbled, isoform N [Drosophila melanogaster]
 gi|383292967|gb|AFH06636.1| scribbled, isoform N [Drosophila melanogaster]
          Length = 2554

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+L+     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLN----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LNNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|195574155|ref|XP_002105055.1| GD21289 [Drosophila simulans]
 gi|194200982|gb|EDX14558.1| GD21289 [Drosophila simulans]
          Length = 2647

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G+++
Sbjct: 254 NLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 170/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA---LLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L N        L +   S LP +      
Sbjct: 255 LLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPAS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+LS     L+++   L  +P EI +   +  L L  N +++LPPEL +C
Sbjct: 309 ------IGQMTKLS----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEIGRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  + KLS+L  L L  N+L+     +  C+  +  L L+ N LS LP  IG+MT 
Sbjct: 256 LEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCE-NMQELILTENFLSELPASIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LSNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|359683928|ref|ZP_09253929.1| hypothetical protein Lsan2_04276 [Leptospira santarosai str.
           2000030832]
          Length = 594

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 193/440 (43%), Gaps = 74/440 (16%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L N  L   P E+ K                LQKL LAHN +  L +++  L  L VL
Sbjct: 127 LRLPNNQLTTFPKEIEK-------------LQKLQKLSLAHNQLTTLPKEIGKLQKLKVL 173

Query: 74  NVSHNKLSELPAAI------GELHM-----------------LKSLDVSFNSIMKIPDEI 110
           N+  N+ + LP  I       ELH+                 L+ L ++ N +  +P EI
Sbjct: 174 NLDGNQFTTLPKEIEKLQKLKELHLGSNQFTTLPKEIKKLQNLQGLHLNNNQLKTLPKEI 233

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           G    L     ++NQLK LP  +G+  NL     +NN +T+LP+++     +  L +  N
Sbjct: 234 GKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTTLPKEIGKLQNLQGLGLHYN 293

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +LT L    I     L  L    N L  +P+ I  L  L  LDLH N++ ++   I    
Sbjct: 294 QLTTLPKE-IGKLQKLQVLSFYSNELTTLPKEIKKLQNLQWLDLHSNQLTTLSKEIGKLQ 352

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--------------- 275
            L E ++ +N L+ LP E+GKL KL  L L  NQL     E  +L               
Sbjct: 353 KLQELHLSSNQLTTLPKEIGKLQKLQELHLGDNQLTTLPEEIGKLQKLKKLYLYNNRLTT 412

Query: 276 ---------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                    +L  LDL NN L+ LP EIG +  L+ L LT N L+TL   + N      L
Sbjct: 413 LPKEIGNLQKLRGLDLGNNKLTALPIEIGNLQKLKWLYLTFNQLKTLPKEIGN------L 466

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + LR    +  D++ +T  E++  +        + L L    L+ +P EI    ++  L 
Sbjct: 467 QKLRGL--DLSDNQLTTIPEEIGNLQKL-----RGLDLSDNQLTTLPKEIGNLQDLEVLY 519

Query: 387 LSRNSIQELPPELSSCASLQ 406
           LS N +  LP E+ +  SL+
Sbjct: 520 LSGNQLTTLPKEIENLQSLE 539



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 154/308 (50%), Gaps = 15/308 (4%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+L+N  L+ +P E+ K               +LQ L L +N +  L +++  L  L  
Sbjct: 241 GLHLNNNQLKTLPKEIGK-------------LQNLQGLHLNNNQLTTLPKEIGKLQNLQG 287

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+L+ LP  IG+L  L+ L    N +  +P EI     L   D  SNQL  L   
Sbjct: 288 LGLHYNQLTTLPKEIGKLQKLQVLSFYSNELTTLPKEIKKLQNLQWLDLHSNQLTTLSKE 347

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+   L +   S+N +T+LP+++    K+ +L +  N+LT L    I     L +L   
Sbjct: 348 IGKLQKLQELHLSSNQLTTLPKEIGKLQKLQELHLGDNQLTTLPEE-IGKLQKLKKLYLY 406

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ IG+L +L  LDL  N++ ++P  I     L   Y+  N L  LP E+G L
Sbjct: 407 NNRLTTLPKEIGNLQKLRGLDLGNNKLTALPIEIGNLQKLKWLYLTFNQLKTLPKEIGNL 466

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            KL  LDL  NQL     E   L +L  LDLS+N L+ LP EIG +  L  L L+GN L 
Sbjct: 467 QKLRGLDLSDNQLTTIPEEIGNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLT 526

Query: 312 TLRSSLVN 319
           TL   + N
Sbjct: 527 TLPKEIEN 534



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 180/373 (48%), Gaps = 16/373 (4%)

Query: 29  YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
           Y N  +A +       +DLQ     H  +  L +++ NL  L  L++ +N+L+ LP  IG
Sbjct: 38  YYNLTKALQHPTDVRYLDLQAKDSNHK-LTNLPKEIGNLQNLQKLSLYNNQLTTLPKEIG 96

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           +L  L+ LD+++NS+  +P EIG    L      +NQL   P  + +   L     ++N 
Sbjct: 97  KLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQ 156

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T+LP+++    K+  L+++GN+ T L    I     L EL    N    +P+ I  L  
Sbjct: 157 LTTLPKEIGKLQKLKVLNLDGNQFTTLPKE-IEKLQKLKELHLGSNQFTTLPKEIKKLQN 215

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L L+ N++ ++P  I    +L   ++ NN L  LP E+GKL  L  L L++NQL   
Sbjct: 216 LQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTTL 275

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  +L+ L  L L  N L+ LP EIGK+  L+ L    N L TL         P  +K
Sbjct: 276 PKEIGKLQNLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYSNELTTL---------PKEIK 326

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            L++    +  S   TT    I    +L    +EL L    L+ +P EI +  ++ +L L
Sbjct: 327 KLQNLQWLDLHSNQLTTLSKEIGKLQKL----QELHLSSNQLTTLPKEIGKLQKLQELHL 382

Query: 388 SRNSIQELPPELS 400
             N +  LP E+ 
Sbjct: 383 GDNQLTTLPEEIG 395



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 184/407 (45%), Gaps = 34/407 (8%)

Query: 17  SNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVS 76
           SN  L ++P E+                 +LQKL L +N +  L +++  L  L  L+++
Sbjct: 61  SNHKLTNLPKEI-------------GNLQNLQKLSLYNNQLTTLPKEIGKLQKLEWLDLN 107

Query: 77  HNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC 136
           +N L+ LP  IG+L  L  L +  N +   P EI     L K   + NQL  LP  +G+ 
Sbjct: 108 YNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPKEIGKL 167

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
             L       N  T+LP+++    K+ +L +  N+ T L    I     L  L  + N L
Sbjct: 168 QKLKVLNLDGNQFTTLPKEIEKLQKLKELHLGSNQFTTLPKE-IKKLQNLQGLHLNNNQL 226

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P+ IG L  L  L L+ N++ ++P  I    +L   ++ NN L+ LP E+GKL  L 
Sbjct: 227 KTLPKEIGKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTTLPKEIGKLQNLQ 286

Query: 257 TLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            L LH NQL     E  +L +L VL   +N L+ LP EI K+  L+ L L  N L TL  
Sbjct: 287 GLGLHYNQLTTLPKEIGKLQKLQVLSFYSNELTTLPKEIKKLQNLQWLDLHSNQLTTLSK 346

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIP 373
            +  G    L              E   +   L T+   +    K  EL L    L+ +P
Sbjct: 347 EI--GKLQKL-------------QELHLSSNQLTTLPKEIGKLQKLQELHLGDNQLTTLP 391

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCI 420
            EI +  ++ KL L  N +  LP E+ +   L  +  DL  NK + +
Sbjct: 392 EEIGKLQKLKKLYLYNNRLTTLPKEIGNLQKL--RGLDLGNNKLTAL 436



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 149/299 (49%), Gaps = 15/299 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+L+N  L  +P E+ K               +LQ L L +N +  L +++  L  L V
Sbjct: 264 GLHLNNNQLTTLPKEIGK-------------LQNLQGLGLHYNQLTTLPKEIGKLQKLQV 310

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+   N+L+ LP  I +L  L+ LD+  N +  +  EIG    L +   SSNQL  LP  
Sbjct: 311 LSFYSNELTTLPKEIKKLQNLQWLDLHSNQLTTLSKEIGKLQKLQELHLSSNQLTTLPKE 370

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+   L +    +N +T+LPE++    K+ KL +  N+LT L    I +   L  L   
Sbjct: 371 IGKLQKLQELHLGDNQLTTLPEEIGKLQKLKKLYLYNNRLTTLPKE-IGNLQKLRGLDLG 429

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG+L +L  L L  N++ ++P  I     L    + +N L+ +P E+G L
Sbjct: 430 NNKLTALPIEIGNLQKLKWLYLTFNQLKTLPKEIGNLQKLRGLDLSDNQLTTIPEEIGNL 489

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            KL  LDL  NQL     E   L+ L VL LS N L+ LP EI  + +L  L L+ NPL
Sbjct: 490 QKLRGLDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLTTLPKEIENLQSLESLNLSNNPL 548



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 129/274 (47%), Gaps = 16/274 (5%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R L+L   K SN+ +T+LP+++ +   + KL +  N+LT L    I     L  L  + N
Sbjct: 52  RYLDLQA-KDSNHKLTNLPKEIGNLQNLQKLSLYNNQLTTLPKE-IGKLQKLEWLDLNYN 109

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+ IG L +L  L L  N++ + P  I     L +  + +N L+ LP E+GKL K
Sbjct: 110 SLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPKEIGKLQK 169

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L  NQ      E  +L +L  L L +N  + LP EI K+  L+ L L  N L+TL
Sbjct: 170 LKVLNLDGNQFTTLPKEIEKLQKLKELHLGSNQFTTLPKEIKKLQNLQGLHLNNNQLKTL 229

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +        L+ L+  L  N +   +  KE  I     L    + L L    L+ +P
Sbjct: 230 PKEI------GKLQNLQG-LHLNNNQLKTLPKE--IGKLQNL----QGLHLNNNQLTTLP 276

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            EI +   +  L L  N +  LP E+     LQV
Sbjct: 277 KEIGKLQNLQGLGLHYNQLTTLPKEIGKLQKLQV 310



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 6/171 (3%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N +  L +++ NL  L  L++ +NKL+ LP  IG L  LK L ++FN +  +P EIG+ 
Sbjct: 407 NNRLTTLPKEIGNLQKLRGLDLGNNKLTALPIEIGNLQKLKWLYLTFNQLKTLPKEIGNL 466

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D S NQL  +P  +G    L     S+N +T+LP+++ +   +  L + GN+LT
Sbjct: 467 QKLRGLDLSDNQLTTIPEEIGNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLT 526

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
            L    I +   L  L  S N L   PE IG L  L  L     R+ +IP+
Sbjct: 527 TLPKE-IENLQSLESLNLSNNPLTSFPEEIGKLQHLKWL-----RLENIPT 571



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 3/129 (2%)

Query: 43  EAVDLQKL---ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           E  +LQKL    L  N ++ L +++ NL  L  L++S N+L+ +P  IG L  L+ LD+S
Sbjct: 439 EIGNLQKLKWLYLTFNQLKTLPKEIGNLQKLRGLDLSDNQLTTIPEEIGNLQKLRGLDLS 498

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N +  +P EIG+   L     S NQL  LP  +    +L     SNN +TS PE++   
Sbjct: 499 DNQLTTLPKEIGNLQDLEVLYLSGNQLTTLPKEIENLQSLESLNLSNNPLTSFPEEIGKL 558

Query: 160 SKMSKLDVE 168
             +  L +E
Sbjct: 559 QHLKWLRLE 567


>gi|194743396|ref|XP_001954186.1| GF18150 [Drosophila ananassae]
 gi|190627223|gb|EDV42747.1| GF18150 [Drosophila ananassae]
          Length = 782

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 185/385 (48%), Gaps = 27/385 (7%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E D WW  V L  L L+ N +  L   + NL  LTVL +  N L ELP  IG+L  L  L
Sbjct: 239 EEDAWWNQVPLNNLDLSSNALTHLSSKIENLASLTVLTLHDNALVELPPEIGKLEKLMRL 298

Query: 97  DVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +VS N +  +P EI S   L   + S N+ KEL   +     L      +N I SLP  +
Sbjct: 299 NVSHNKLSHLPREIYSLPDLRHLNISYNEFKELDPDISDLHMLEFLDGGHNNIQSLPGGI 358

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
               +++ L +  N +  L  +L+ +   L ++   +N L G+P+ +G L +L  L L  
Sbjct: 359 GFLVRLTTLLLPYNHIKELPPDLV-NMRSLQKIELEQNDLIGLPDDMGLLRKLECLYLQH 417

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEYCVEACQL 275
           N IL +P    G  SL E +  NN +  +P  +   L  L  LDL  N++ E   E C L
Sbjct: 418 NDILELP-DFEGNESLNELHASNNFIKTIPKSMCSNLPHLKILDLRDNKITELPDELCLL 476

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           R L+ LD+SNNS+S LP  +  +  L  L + GNP++T+R  ++   T  +LK L  R  
Sbjct: 477 RNLTRLDVSNNSISVLPVTLSSLAHLISLQVDGNPIKTIRRDILQCGTTRILKTLHERAM 536

Query: 335 ENED---SEASTTKEDLITMATRLSVT-----------------SKELSLEGMNLSAIPS 374
            N++   S+A++T   +     R   T                 ++ L++    L+ +P 
Sbjct: 537 ANKEEGGSDAASTSGGISVTRLRGGHTDTGDIPENFPDRYKLRHTRTLAVNLEQLTEVPE 596

Query: 375 EIWEAGE---ITKLDLSRNSIQELP 396
           ++++  +   +  +D +RN +  LP
Sbjct: 597 QVFQLAKEEGVHVVDFARNQLSTLP 621



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 137/330 (41%), Gaps = 61/330 (18%)

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
           NLP L +L++  NK++ELP  +  L  L  LDVS NSI  +P  + S   L+      N 
Sbjct: 452 NLPHLKILDLRDNKITELPDELCLLRNLTRLDVSNNSISVLPVTLSSLAHLISLQVDGNP 511

Query: 126 LKELPSSLGRC------------------------------LNLSDFKASNNCITSLPED 155
           +K +   + +C                              ++++  +  +     +PE+
Sbjct: 512 IKTIRRDILQCGTTRILKTLHERAMANKEEGGSDAASTSGGISVTRLRGGHTDTGDIPEN 571

Query: 156 LADCSKMSK-----------------------------LDVEGNKLTVLSNNLIASWTML 186
             D  K+                               +D   N+L+ L N L      L
Sbjct: 572 FPDRYKLRHTRTLAVNLEQLTEVPEQVFQLAKEEGVHVVDFARNQLSTLPNGLQHMREQL 631

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
           TEL+ S NL+  +P+ I   +R+  ++L  N +  +P       +L E  + NN    +P
Sbjct: 632 TELVLSNNLIGHVPQFISQFTRISYMNLSNNLLNDLPKEFGVLVTLRELNVANNRFQFIP 691

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEA--CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
             + +L  L       N +K+  V    C  RL+ LDL NN +  +PP +G +T +  L 
Sbjct: 692 NGIYELQGLEIFIASENHIKQLNVSGLQCMPRLTTLDLRNNDIDNVPPILGNLTNITHLE 751

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L GNP R  R  ++   T A++ YLR R+P
Sbjct: 752 LVGNPFRQPRHQILMKGTEAIMSYLRDRIP 781



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 122/481 (25%), Positives = 196/481 (40%), Gaps = 120/481 (24%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S+  L  +P E+Y                DL+ L +++N  ++L  D+ +L +L  L
Sbjct: 298 LNVSHNKLSHLPREIYS-------------LPDLRHLNISYNEFKELDPDISDLHMLEFL 344

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +  HN +  LP  IG L  L +L + +N I ++P ++ +  +L K +   N L  LP  +
Sbjct: 345 DGGHNNIQSLPGGIGFLVRLTTLLLPYNHIKELPPDLVNMRSLQKIELEQNDLIGLPDDM 404

Query: 134 G-----RCL--------NLSDFK---------ASNNCITSLPEDLADCSKMSKL---DVE 168
           G      CL         L DF+         ASNN I ++P+ +  CS +  L   D+ 
Sbjct: 405 GLLRKLECLYLQHNDILELPDFEGNESLNELHASNNFIKTIPKSM--CSNLPHLKILDLR 462

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI------ 222
            NK+T L + L      LT L  S N ++ +P T+ SL+ LI L +  N I +I      
Sbjct: 463 DNKITELPDELCL-LRNLTRLDVSNNSISVLPVTLSSLAHLISLQVDGNPIKTIRRDILQ 521

Query: 223 ------------------------PSSISGCCSLAEFYMGNNALSALPAELG---KLSKL 255
                                    +S SG  S+     G+     +P       KL   
Sbjct: 522 CGTTRILKTLHERAMANKEEGGSDAASTSGGISVTRLRGGHTDTGDIPENFPDRYKLRHT 581

Query: 256 GTLDLHSNQLKEYCVEACQLR----LSVLDLSNNSLSGLPPEIGKMT-TLRKLLLTGNPL 310
            TL ++  QL E   +  QL     + V+D + N LS LP  +  M   L +L+L+ N +
Sbjct: 582 RTLAVNLEQLTEVPEQVFQLAKEEGVHVVDFARNQLSTLPNGLQHMREQLTELVLSNNLI 641

Query: 311 RTLRSSLVNGPTPALL-KYLR-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
                    G  P  + ++ R S +  + +      KE  +       VT +EL++    
Sbjct: 642 ---------GHVPQFISQFTRISYMNLSNNLLNDLPKEFGVL------VTLRELNVANNR 686

Query: 369 LSAIPSEIWE--------AGE----------------ITKLDLSRNSIQELPPELSSCAS 404
              IP+ I+E        A E                +T LDL  N I  +PP L +  +
Sbjct: 687 FQFIPNGIYELQGLEIFIASENHIKQLNVSGLQCMPRLTTLDLRNNDIDNVPPILGNLTN 746

Query: 405 L 405
           +
Sbjct: 747 I 747



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 128/319 (40%), Gaps = 63/319 (19%)

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
           MK  D   +   L   D SSN L  L S +    +L+     +N +  LP ++    K+ 
Sbjct: 237 MKEEDAWWNQVPLNNLDLSSNALTHLSSKIENLASLTVLTLHDNALVELPPEIGKLEKLM 296

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +L+V  NKL+ L                        P  I SL  L  L++  N    + 
Sbjct: 297 RLNVSHNKLSHL------------------------PREIYSLPDLRHLNISYNEFKELD 332

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
             IS    L     G+N + +LP  +G L +L TL L  N +KE   +   +R L  ++L
Sbjct: 333 PDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTTLLLPYNHIKELPPDLVNMRSLQKIEL 392

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA- 341
             N L GLP ++G +  L  L L  N +                      LP+ E +E+ 
Sbjct: 393 EQNDLIGLPDDMGLLRKLECLYLQHNDIL--------------------ELPDFEGNESL 432

Query: 342 ----------STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                      T  + + +    L +    L L    ++ +P E+     +T+LD+S NS
Sbjct: 433 NELHASNNFIKTIPKSMCSNLPHLKI----LDLRDNKITELPDELCLLRNLTRLDVSNNS 488

Query: 392 IQELPPELSSCA---SLQV 407
           I  LP  LSS A   SLQV
Sbjct: 489 ISVLPVTLSSLAHLISLQV 507


>gi|322784971|gb|EFZ11742.1| hypothetical protein SINV_11435 [Solenopsis invicta]
          Length = 580

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 196/421 (46%), Gaps = 76/421 (18%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ VY+                L  L L  N ++ + +++ NL  LT+L
Sbjct: 173 LDLRHNKLTEIPDVVYR-------------LTSLTTLYLRFNRLKYVSDNICNLTRLTML 219

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +   NK+ ELPA IGEL  L + DVS N +  +P EIG    L   D   N+L +LP ++
Sbjct: 220 SFRENKIKELPAGIGELVNLVTFDVSHNHLEHLPVEIGKCVQLSSLDVQHNELLDLPDTI 279

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  + L+      N +T++P+ LA+C  M +  VEGN+++ L + L+AS + LT +  S+
Sbjct: 280 GNLVALTRLGLRYNRLTNIPKSLANCRMMDEFSVEGNQVSHLPDGLLASLSCLTTITLSR 339

Query: 194 ------------------------NLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISG 228
                                   N ++ +P  I S SR L +L++ +N + ++P  I  
Sbjct: 340 NNFTSYPAGGPAQFVNAYSINVEHNQIDKIPYGIFSRSRNLTKLNMKENLLNALPLDIGS 399

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             ++ E  +G N L  LP ++  L  L  L L +N LK        L +L VLDL  N +
Sbjct: 400 WVTMVELNLGTNQLMKLPDDIQCLQSLEVLILSNNLLKRIPTTMVNLHKLRVLDLEENRI 459

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             LP +IG MT L+KL+L  N +  L         P  + +L++                
Sbjct: 460 DMLPNDIGLMTELQKLILQSNQITVL---------PRSIGHLKN---------------- 494

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQ 406
                T LSV          NLS +P E+     +  L L+ N ++  LP EL+ C +L 
Sbjct: 495 ----LTYLSVGEN-------NLSCLPEEVGTLDSLESLYLNDNPNLHNLPFELALCKNLG 543

Query: 407 V 407
           +
Sbjct: 544 I 544


>gi|321472408|gb|EFX83378.1| hypothetical protein DAPPUDRAFT_315899 [Daphnia pulex]
          Length = 630

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 195/398 (48%), Gaps = 56/398 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L D+P+ VYK                L  L L  N I  + +++R L  LT+L
Sbjct: 223 LDLRHNKLHDIPDVVYK-------------LHSLTTLFLRFNRIRVVGDEIRQLTHLTML 269

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELPA IG L  L + DVS N +  +P+EIG+   L   D   N+L ++P S+
Sbjct: 270 SLRENKIRELPAGIGRLTNLITFDVSHNHLEHLPEEIGNCVQLSSLDLQHNELLDIPESI 329

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL+      N +TS+P  L++C  M + +VEGN ++ L + L++S + LT +  S+
Sbjct: 330 GQLRNLNRLGLRYNRLTSVPRSLSNCVHMDEFNVEGNAISHLPDGLLSSLSQLTSITFSR 389

Query: 194 NLLNGMPETIGSLSRLIR---LDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P   G  S+ I    ++L  N++  IP  I S    LA+  M  N L++LP ++
Sbjct: 390 NSFTAYPS--GGPSQFINVHSINLEHNQVDKIPYGIFSRAKHLAKLNMKENLLTSLPLDI 447

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G    +  L+L +NQL +   +   L+ L VL LSNN+L  +P  IG +  LR L L  N
Sbjct: 448 GTWVNMVELNLGTNQLNKVPDDIALLQSLEVLILSNNNLKRVPNSIGNLRKLRVLDLEEN 507

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L TL         P  + +LR                DL           K+L ++   
Sbjct: 508 KLETL---------PNEIGFLR----------------DL-----------KKLIVQSNQ 531

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L+++P  +     +T L +  N++  +P E+ +  +L+
Sbjct: 532 LTSLPRAVGHLSNLTYLSVGENNLSYIPEEIGTLETLE 569



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 174/379 (45%), Gaps = 64/379 (16%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L VL++ HNKL ++P  + +LH L +L + FN I 
Sbjct: 195 VNLSTLALSENSLTGLPDSLANLRCLRVLDLRHNKLHDIPDVVYKLHSLTTLFLRFNRIR 254

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            + DEI   T L       N+++ELP+ +GR  NL  F  S+N +  LPE++ +C ++S 
Sbjct: 255 VVGDEIRQLTHLTMLSLRENKIRELPAGIGRLTNLITFDVSHNHLEHLPEEIGNCVQLSS 314

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +PE+IG L  L RL L  NR+ S+P 
Sbjct: 315 LDLQHNELL------------------------DIPESIGQLRNLNRLGLRYNRLTSVPR 350

Query: 225 SISGCCSLAEFYMGNNALSALP-------------------------AELGKLSKLGTLD 259
           S+S C  + EF +  NA+S LP                             +   + +++
Sbjct: 351 SLSNCVHMDEFNVEGNAISHLPDGLLSSLSQLTSITFSRNSFTAYPSGGPSQFINVHSIN 410

Query: 260 LHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           L  NQ+ +  Y + +    L+ L++  N L+ LP +IG    + +L L  N L  +   +
Sbjct: 411 LEHNQVDKIPYGIFSRAKHLAKLNMKENLLTSLPLDIGTWVNMVELNLGTNQLNKVPDDI 470

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                 ALL+ L   +  N + +        I    +L V    L LE   L  +P+EI 
Sbjct: 471 ------ALLQSLEVLILSNNNLKRVPNS---IGNLRKLRV----LDLEENKLETLPNEIG 517

Query: 378 EAGEITKLDLSRNSIQELP 396
              ++ KL +  N +  LP
Sbjct: 518 FLRDLKKLIVQSNQLTSLP 536



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 154/330 (46%), Gaps = 23/330 (6%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S +S+  +P  +   T L +F    N+L  LP  +G  +NLS    S N +T LP+ 
Sbjct: 154 LDLSKSSVTLLPPSVRELTHLTEFYLYGNKLACLPPEIGCLVNLSTLALSENSLTGLPDS 213

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           LA+   +  LD+  NKL  +  +++     LT L    N +  + + I  L+ L  L L 
Sbjct: 214 LANLRCLRVLDLRHNKLHDIP-DVVYKLHSLTTLFLRFNRIRVVGDEIRQLTHLTMLSLR 272

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N+I  +P+ I    +L  F + +N L  LP E+G   +L +LDL  N+L +      QL
Sbjct: 273 ENKIRELPAGIGRLTNLITFDVSHNHLEHLPEEIGNCVQLSSLDLQHNELLDIPESIGQL 332

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL-----------------RSSL 317
           R L+ L L  N L+ +P  +     + +  + GN +  L                 R+S 
Sbjct: 333 RNLNRLGLRYNRLTSVPRSLSNCVHMDEFNVEGNAISHLPDGLLSSLSQLTSITFSRNSF 392

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
              P+    +++       E ++       + + A  L+    +L+++   L+++P +I 
Sbjct: 393 TAYPSGGPSQFINVHSINLEHNQVDKIPYGIFSRAKHLA----KLNMKENLLTSLPLDIG 448

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQV 407
               + +L+L  N + ++P +++   SL+V
Sbjct: 449 TWVNMVELNLGTNQLNKVPDDIALLQSLEV 478



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 25/210 (11%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           +  A  L KL +  N +  L  D+     +  LN+  N+L+++P  I  L  L+ L +S 
Sbjct: 424 FSRAKHLAKLNMKENLLTSLPLDIGTWVNMVELNLGTNQLNKVPDDIALLQSLEVLILSN 483

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N++ ++P+ IG+   L   D   N+L+ LP+ +G   +L      +N +TSLP  +   S
Sbjct: 484 NNLKRVPNSIGNLRKLRVLDLEENKLETLPNEIGFLRDLKKLIVQSNQLTSLPRAVGHLS 543

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL-IRLDLHQNRI 219
            ++ L V  N L+ +                        PE IG+L  L          +
Sbjct: 544 NLTYLSVGENNLSYI------------------------PEEIGTLETLESLYLNDNLNL 579

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAEL 249
            ++P  ++ C SL    + N  LS +PAE+
Sbjct: 580 HNLPFELALCSSLQIMSIENCPLSQIPAEI 609


>gi|51092111|gb|AAT94469.1| RE02389p [Drosophila melanogaster]
          Length = 1756

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 161/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LPA +G++ 
Sbjct: 254 NLLEALPDDIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMI 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 170/362 (46%), Gaps = 38/362 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L  LP +I K++ L  L L  N L+ L  +L N      L      L EN  SE   + 
Sbjct: 255 LLEALPDDIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELI-----LTENFLSELPASI 309

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             +I +          L+++   L  +P EI +   +  L L  N +++LPPEL +C  L
Sbjct: 310 GQMIKL--------NNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 406 QV 407
            V
Sbjct: 362 HV 363



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+D+A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDDIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG + +L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCENMQELILTENFLSELPASIGQMIKLNNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L +D+  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLEALPDDIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG    L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMIKLNNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W    +
Sbjct: 333 GQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSENQ 392

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 393 ---SQPLLTFQPDT 403


>gi|291224779|ref|XP_002732380.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 1162

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 204/398 (51%), Gaps = 58/398 (14%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K  +++DL +L         L +DLR      +LN+ H++L+ +P+ IGE H L+ LD+S
Sbjct: 192 KKHKSIDLSRL--------GLYKDLR------ILNLKHSELTIVPSEIGECHELQKLDLS 237

Query: 100 FNSIMKI-----------------------PDEIGSATALVKFDCSSNQLKELPSSLGRC 136
           FN I KI                       PDEIG   ++   + SSN+++++P+SL   
Sbjct: 238 FNKISKIPESLYALEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCAL 297

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
             L++    +N +TS+P+++     M  LD+  NK+  + ++L A    LTEL  + N L
Sbjct: 298 EKLTELNMGSNALTSIPDEIGKLKSMETLDLSFNKIDKIPDSLCA-LEKLTELYMNDNAL 356

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P+ IG L  +  L+L  N+I  IP+S+     L E  M  NAL+A+P E+ KL  + 
Sbjct: 357 TSVPDEIGKLKSMKTLNLSSNKIEKIPASLCTLEQLTELDMKYNALTAIPDEISKLKSMN 416

Query: 257 TLDLHSNQLKEYCVEACQL-RLSVLDLSN------NSLSGLPPEIGKMTTLRKLLLTGNP 309
            L+L +N++++     C L +L+ LD+++      N+L+ +P EI K+ +++ L L  N 
Sbjct: 417 ILNLDNNKMEKIPDSLCALQQLTELDMNDXXXMASNALTSIPDEISKLKSMKILNLDNNK 476

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           ++ +         PA L  L+       +  A T+  D I+    + +    L+L    +
Sbjct: 477 MKKI---------PASLCALQQLTELYMNGNALTSIPDEISKLKSMKI----LNLYFNKI 523

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             IP  +    ++T+L+++ N++  +P E+S   S+++
Sbjct: 524 DKIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKI 561



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 202/370 (54%), Gaps = 25/370 (6%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV------SF 100
           L +L + +N +  + +++  L  + +LN+ +NK+ ++P ++  L  L  LD+      + 
Sbjct: 392 LTELDMKYNALTAIPDEISKLKSMNILNLDNNKMEKIPDSLCALQQLTELDMNDXXXMAS 451

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N++  IPDEI    ++   +  +N++K++P+SL     L++   + N +TS+P++++   
Sbjct: 452 NALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEISKLK 511

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            M  L++  NK+  + ++L A    LTEL  + N L  +P+ I  L  +  L+L  N++ 
Sbjct: 512 SMKILNLYFNKIDKIPDSLCA-LEKLTELNMASNALTSIPDEISKLKSMKILNLDNNKMK 570

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
            IP+S+     L E YM  NAL+++P E+GKL  + TL+L  N++++     C L +L+ 
Sbjct: 571 KIPASLCALQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLCALEQLTE 630

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL--VNGPTPALLKYLRSRLPENE 337
           L++ +N+L+ +P EIGK+ +++ L L+ N +  + +SL  ++  T  +++          
Sbjct: 631 LNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIMR---------- 680

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            S A T   D I+    + +    L+L+   +  IP  +    ++T+LD+  N++  +P 
Sbjct: 681 -SNALTAIPDEISKLKSMKI----LNLDNNKMEKIPDSLCALQQLTELDIRSNALTSIPD 735

Query: 398 ELSSCASLQV 407
           E+    S+++
Sbjct: 736 EIGKLKSMKI 745



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 189/361 (52%), Gaps = 40/361 (11%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L +  N +  + +++  L  + +LN+  NK+ ++P ++  L  L  L+++ N++  I
Sbjct: 490 LTELYMNGNALTSIPDEISKLKSMKILNLYFNKIDKIPDSLCALEKLTELNMASNALTSI 549

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PDEI    ++   +  +N++K++P+SL     L++   + N +TS+P+++     M  L+
Sbjct: 550 PDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEIGKLKSMETLN 609

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK+  + ++L A    LTEL    N L  +P+ IG L  +  L+L  N+I  IP+S+
Sbjct: 610 LSFNKIEKIPDSLCA-LEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASL 668

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E  M +NAL+A+P E+ KL  +  L+L +N++++     C L +L+ LD+ +N
Sbjct: 669 CALDQLTELIMRSNALTAIPDEISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSN 728

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           +L+ +P EIGK+ +++ L L  N +  +  SL      AL K                  
Sbjct: 729 ALTSIPDEIGKLKSMKILNLDNNKMEKIPDSLC-----ALEKL----------------- 766

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                          +L++E   L+AIP EI +   +T L+LS N I+++P  L  CA +
Sbjct: 767 --------------TDLNMEHNALTAIPDEIGKLKSMTTLNLSFNKIEKIPDSL--CAGI 810

Query: 406 Q 406
           +
Sbjct: 811 K 811



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 180/331 (54%), Gaps = 12/331 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L +A N +  + +++  L  + +LN+ +NK+ ++PA++  L  L  L ++ N++  I
Sbjct: 536 LTELNMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSI 595

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PDEIG   ++   + S N+++++P SL     L++    +N +TS+P+++     M  L+
Sbjct: 596 PDEIGKLKSMETLNLSFNKIEKIPDSLCALEQLTELNMRSNALTSVPDEIGKLKSMKTLN 655

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK+  +  +L A    LTELI   N L  +P+ I  L  +  L+L  N++  IP S+
Sbjct: 656 LSSNKIEKIPASLCA-LDQLTELIMRSNALTAIPDEISKLKSMKILNLDNNKMEKIPDSL 714

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E  + +NAL+++P E+GKL  +  L+L +N++++     C L +L+ L++ +N
Sbjct: 715 CALQQLTELDIRSNALTSIPDEIGKLKSMKILNLDNNKMEKIPDSLCALEKLTDLNMEHN 774

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           +L+ +P EIGK+ ++  L L+ N +  +  SL  G     LK +  RL EN+       K
Sbjct: 775 ALTAIPDEIGKLKSMTTLNLSFNKIEKIPDSLCAGIKK--LKLIHLRLNENK------LK 826

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           E    +   L +   ELSL G  L  +P  I
Sbjct: 827 EFPWQVIEELPLC--ELSLCGNKLQTVPDHI 855



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 208/425 (48%), Gaps = 59/425 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL +  L  VP+E+              E  +LQKL L+ N I K+ E L  L  LT L
Sbjct: 211 LNLKHSELTIVPSEI-------------GECHELQKLDLSFNKISKIPESLYALEQLTEL 257

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMK-----------------------IPDEI 110
           N+  N L+ +P  IG+L  +K+L++S N I K                       IPDEI
Sbjct: 258 NMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALEKLTELNMGSNALTSIPDEI 317

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           G   ++   D S N++ ++P SL     L++   ++N +TS+P+++     M  L++  N
Sbjct: 318 GKLKSMETLDLSFNKIDKIPDSLCALEKLTELYMNDNALTSVPDEIGKLKSMKTLNLSSN 377

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           K+  +  +L  +   LTEL    N L  +P+ I  L  +  L+L  N++  IP S+    
Sbjct: 378 KIEKIPASL-CTLEQLTELDMKYNALTAIPDEISKLKSMNILNLDNNKMEKIPDSLCALQ 436

Query: 231 SLAEF------YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            L E        M +NAL+++P E+ KL  +  L+L +N++K+     C L +L+ L ++
Sbjct: 437 QLTELDMNDXXXMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMN 496

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NEDSEAS 342
            N+L+ +P EI K+ +++ L L  N +  +  SL      AL      +L E N  S A 
Sbjct: 497 GNALTSIPDEISKLKSMKILNLYFNKIDKIPDSLC-----AL-----EKLTELNMASNAL 546

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           T+  D I+    + +    L+L+   +  IP+ +    ++T+L ++ N++  +P E+   
Sbjct: 547 TSIPDEISKLKSMKI----LNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEIGKL 602

Query: 403 ASLQV 407
            S++ 
Sbjct: 603 KSMET 607



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 197/375 (52%), Gaps = 18/375 (4%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           +A N +  + +++  L  + +LN+ +NK+ ++PA++  L  L  L ++ N++  IPDEI 
Sbjct: 449 MASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEIS 508

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
              ++   +   N++ ++P SL     L++   ++N +TS+P++++    M  L+++ NK
Sbjct: 509 KLKSMKILNLYFNKIDKIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKILNLDNNK 568

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  +  +L A    LTEL  + N L  +P+ IG L  +  L+L  N+I  IP S+     
Sbjct: 569 MKKIPASLCA-LQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLCALEQ 627

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L E  M +NAL+++P E+GKL  + TL+L SN++++     C L +L+ L + +N+L+ +
Sbjct: 628 LTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIMRSNALTAI 687

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EI K+ +++ L L  N +  +  SL           L+     +  S A T+  D I 
Sbjct: 688 PDEISKLKSMKILNLDNNKMEKIPDSLC---------ALQQLTELDIRSNALTSIPDEIG 738

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE---LSSCASLQV 407
               + +    L+L+   +  IP  +    ++T L++  N++  +P E   L S  +L +
Sbjct: 739 KLKSMKI----LNLDNNKMEKIPDSLCALEKLTDLNMEHNALTAIPDEIGKLKSMTTLNL 794

Query: 408 KFSDLVTNKESCISG 422
            F+ +    +S  +G
Sbjct: 795 SFNKIEKIPDSLCAG 809



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 134/260 (51%), Gaps = 15/260 (5%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I S+ ED A C +M +LD+   K   +  + +  +  L  L    + L  +P  IG    
Sbjct: 172 IQSVQEDTATCVEM-ELDLSHKKHKSIDLSRLGLYKDLRILNLKHSELTIVPSEIGECHE 230

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L +LDL  N+I  IP S+     L E  M +NAL+++P E+GKL  + TL+L SN++++ 
Sbjct: 231 LQKLDLSFNKISKIPESLYALEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKI 290

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
               C L +L+ L++ +N+L+ +P EIGK+ ++  L L+ N +  +  SL      AL K
Sbjct: 291 PASLCALEKLTELNMGSNALTSIPDEIGKLKSMETLDLSFNKIDKIPDSLC-----ALEK 345

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                + +N    A T+  D I     +    K L+L    +  IP+ +    ++T+LD+
Sbjct: 346 LTELYMNDN----ALTSVPDEIGKLKSM----KTLNLSSNKIEKIPASLCTLEQLTELDM 397

Query: 388 SRNSIQELPPELSSCASLQV 407
             N++  +P E+S   S+ +
Sbjct: 398 KYNALTAIPDEISKLKSMNI 417



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 108/206 (52%), Gaps = 3/206 (1%)

Query: 70   LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
            L +LN+ H +L+ +P+ IGE H L+ L++SFN I KIPD + +   L + +  SN L  +
Sbjct: 934  LRMLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMGSNALTSI 993

Query: 130  PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
            P  + +  ++     S N I  +P+ L    ++  L++ GN LT + +  +   T+  + 
Sbjct: 994  PDEISKLKSMKTLNLSFNKIAKIPDSLCALEQLRILNMNGNALTAIPSVKLQHQTLDIDN 1053

Query: 190  IASK-NLLNGMPETIGSLSRLIRLDLHQNRILSIP-SSISGCCSLAEFYMGNNALSALPA 247
             AS  +L  GM E I  L +LIRL L+ N++   P   I    SL +  +  N L  +P 
Sbjct: 1054 GASVFSLCFGMSERIKKL-KLIRLQLNDNKLKEFPWQIIEELHSLYKLSLCGNELQTVPD 1112

Query: 248  ELGKLSKLGTLDLHSNQLKEYCVEAC 273
             +G+L +    ++  ++L+ +  + C
Sbjct: 1113 HIGRLLRYHPCEVCEHRLRMHYRKPC 1138



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 84/390 (21%), Positives = 170/390 (43%), Gaps = 86/390 (22%)

Query: 14   LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
            LN+ + +L  VP+E+   K+           E +         L +LI+  N +  + ++
Sbjct: 631  LNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIMRSNALTAIPDE 690

Query: 64   LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
            +  L  + +LN+ +NK+ ++P ++  L  L  LD+  N++  IPDEIG   ++   +  +
Sbjct: 691  ISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSNALTSIPDEIGKLKSMKILNLDN 750

Query: 124  NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS- 182
            N+++++P SL     L+D    +N +T++P+++     M+ L++  NK+  + ++L A  
Sbjct: 751  NKMEKIPDSLCALEKLTDLNMEHNALTAIPDEIGKLKSMTTLNLSFNKIEKIPDSLCAGI 810

Query: 183  -------------------WTMLTELIASK-----NLLNGMPETIGSLSRL--------- 209
                               W ++ EL   +     N L  +P+ IG L R          
Sbjct: 811  KKLKLIHLRLNENKLKEFPWQVIEELPLCELSLCGNKLQTVPDHIGRLLRYHPCRKCKHV 870

Query: 210  ----------------------------------------IRLDLHQNRILSIP-SSISG 228
                                                    ++LDL   +  SI  S +  
Sbjct: 871  SLMHYRKTCIYFGYSTKWRMRRRRGMTTDLSTKDTATHVGMKLDLSYGKHKSIDLSRLGS 930

Query: 229  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
               L    + +  L+ +P+E+G+  KL  L+L  N++ +     C L +L+ +++ +N+L
Sbjct: 931  YKHLRMLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMGSNAL 990

Query: 288  SGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            + +P EI K+ +++ L L+ N +  +  SL
Sbjct: 991  TSIPDEISKLKSMKTLNLSFNKIAKIPDSL 1020


>gi|218440192|ref|YP_002378521.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
 gi|218172920|gb|ACK71653.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
          Length = 867

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 145/277 (52%), Gaps = 2/277 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +   L+ L L +N +  L   +  L  LT LN++ N+LS LP  IG+L+ L  L +S+N 
Sbjct: 37  QLTHLRYLDLRNNKLTTLPPQIGKLKKLTSLNLTDNQLSALPPEIGQLNNLSRLHLSYNK 96

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P+EIG  T L +   S N L+ LP++L   +N++    S N  TSLP  +     +
Sbjct: 97  LTNLPEEIGQLTHLSELYLSHNFLETLPTTLNHLVNINRLSLSYNQFTSLPPQIKGLISL 156

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           S  D+  N+LT L    I     L +L    N L  +P  IG L RL  LD+  N+++S+
Sbjct: 157 SWWDLNNNQLTTLPPE-IGQLKSLNQLDLGYNQLTTLPPEIGELYRLTSLDVSYNQLISL 215

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P  I    +L    + NN L+ LP E+G LS L +L+L  NQL     E  QL +L    
Sbjct: 216 PPEIQFLINLDSLTLSNNQLATLPPEIGFLSNLISLNLSYNQLTSIPPEIGQLTKLIQFR 275

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           LS+N +  LPPEI  +T L  L+L  N L  L   L+
Sbjct: 276 LSHNKIETLPPEIRCLTQLTSLMLKNNQLLALPLELI 312



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 161/324 (49%), Gaps = 41/324 (12%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           ++LD+SF  +  +P +I   T L   D  +N+L  LP  +G+   L+    ++N +++LP
Sbjct: 19  ETLDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTLPPQIGKLKKLTSLNLTDNQLSALP 78

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
            ++   + +S+L +  NKLT L    I   T L+EL  S N L  +P T+  L  + RL 
Sbjct: 79  PEIGQLNNLSRLHLSYNKLTNLPEE-IGQLTHLSELYLSHNFLETLPTTLNHLVNINRLS 137

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L  N+  S+P  I G  SL+ + + NN L+ LP E+G+L  L  LDL  NQL     E  
Sbjct: 138 LSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSLNQLDLGYNQLTTLPPEIG 197

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           +L RL+ LD+S N L  LPPEI  +  L  L L+ N L TL         P  + +L   
Sbjct: 198 ELYRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATL---------PPEIGFL--- 245

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
                         +LI+           L+L    L++IP EI +  ++ +  LS N I
Sbjct: 246 -------------SNLIS-----------LNLSYNQLTSIPPEIGQLTKLIQFRLSHNKI 281

Query: 393 QELPPE---LSSCASLQVKFSDLV 413
           + LPPE   L+   SL +K + L+
Sbjct: 282 ETLPPEIRCLTQLTSLMLKNNQLL 305



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 150/286 (52%), Gaps = 19/286 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL++  L  +P E+       G+ +      +L +L L++N +  L E++  L  L+ 
Sbjct: 66  SLNLTDNQLSALPPEI-------GQLN------NLSRLHLSYNKLTNLPEEIGQLTHLSE 112

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +SHN L  LP  +  L  +  L +S+N    +P +I    +L  +D ++NQL  LP  
Sbjct: 113 LYLSHNFLETLPTTLNHLVNINRLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPE 172

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  +L+      N +T+LP ++ +  +++ LDV  N+L  L    I     L  L  S
Sbjct: 173 IGQLKSLNQLDLGYNQLTTLPPEIGELYRLTSLDVSYNQLISLPPE-IQFLINLDSLTLS 231

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG LS LI L+L  N++ SIP  I     L +F + +N +  LP E+  L
Sbjct: 232 NNQLATLPPEIGFLSNLISLNLSYNQLTSIPPEIGQLTKLIQFRLSHNKIETLPPEIRCL 291

Query: 253 SKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEI 294
           ++L +L L +NQL    +E  QL    +L+ LD+  N L+ +PPEI
Sbjct: 292 TQLTSLMLKNNQLLALPLELIQLVQFFKLTQLDVQENLLT-IPPEI 336



 Score = 41.6 bits (96), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 36/143 (25%)

Query: 263 NQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           ++L +   +A + +   LDLS   L  LPP+I ++T LR L L  N L TL       P 
Sbjct: 4   DELLQIIQQAIEEKAETLDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTL------PPQ 57

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
              LK L S                              L+L    LSA+P EI +   +
Sbjct: 58  IGKLKKLTS------------------------------LNLTDNQLSALPPEIGQLNNL 87

Query: 383 TKLDLSRNSIQELPPELSSCASL 405
           ++L LS N +  LP E+     L
Sbjct: 88  SRLHLSYNKLTNLPEEIGQLTHL 110


>gi|312378183|gb|EFR24825.1| hypothetical protein AND_10342 [Anopheles darlingi]
          Length = 614

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 193/415 (46%), Gaps = 54/415 (13%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           L+  R    L+L +  L ++P+ +YK                L  L L  N I  + ++L
Sbjct: 198 LQNLRHLKVLDLRHNKLSEIPDVIYK-------------LHTLTTLYLRFNRIRIVGDNL 244

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           +NL  LT+L++  NK+ ELPAAIG L  L +LD+S N +  +P  IG+   L   D   N
Sbjct: 245 KNLSNLTMLSLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPKAIGNCVNLTALDLQHN 304

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
            L ++P ++G   NL       N +TS+P  L +C+ M + +VEGN ++ L + L+AS +
Sbjct: 305 DLLDIPETIGNLSNLMRLGLRYNQLTSIPATLRNCTHMDEFNVEGNGISQLPDGLLASLS 364

Query: 185 MLTELIASKNLLNGMPE----------------------TIGSLSR---LIRLDLHQNRI 219
            LT +  S+N  +  P                         G  SR   L +L++ +N +
Sbjct: 365 NLTTITLSRNAFHSYPSGGPAQFTNVTSINLEHNQIDKIQYGIFSRAKGLTKLNMKENAL 424

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
            S+P  I     + E   G N+L+ LP ++  L  L  L L +N LK        L +L 
Sbjct: 425 TSLPLDIGTWTQMVELNFGTNSLTKLPDDIHCLQNLEILILSNNLLKRIPNTIGNLKKLR 484

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL---------LKYL 329
           VLDL  N L  LP EIG +  L+KL+L  N L +L  ++  G    L         L++L
Sbjct: 485 VLDLEENRLESLPSEIGLLHDLQKLILQSNQLNSLPRTI--GHLTNLTYLSVGENNLQFL 542

Query: 330 RSRLP--ENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAG 380
              +   EN +S        LI +   L++      +S+E   LSA+P E+   G
Sbjct: 543 PEEIGTLENLESLYINDNASLIKLPYELALCQNLAIMSIENCPLSALPPEVVSGG 597



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 153/341 (44%), Gaps = 52/341 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+HN+++ L + + N   LT L++ HN L ++P  IG L  L  L + +N + 
Sbjct: 271 VNLTTLDLSHNHLKHLPKAIGNCVNLTALDLQHNDLLDIPETIGNLSNLMRLGLRYNQLT 330

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSL------------------------------- 133
            IP  + + T + +F+   N + +LP  L                               
Sbjct: 331 SIPATLRNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNV 390

Query: 134 ------------------GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
                              R   L+      N +TSLP D+   ++M +L+   N LT L
Sbjct: 391 TSINLEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKL 450

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
            ++ I     L  LI S NLL  +P TIG+L +L  LDL +NR+ S+PS I     L + 
Sbjct: 451 PDD-IHCLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKL 509

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN-SLSGLPPE 293
            + +N L++LP  +G L+ L  L +  N L+    E   L  L  L +++N SL  LP E
Sbjct: 510 ILQSNQLNSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESLYINDNASLIKLPYE 569

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +     L  + +   PL  L   +V+G    +++YL+   P
Sbjct: 570 LALCQNLAIMSIENCPLSALPPEVVSGGPSLVIQYLKLHSP 610



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 27/229 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S +SI  IP  +   T+LV+F    N++  LP  +G   NL     + N +TSL
Sbjct: 135 IQRLDLSKSSITVIPSSVKDCTSLVEFYLYGNKISSLPPEIGCLANLKTLALNENSLTSL 194

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+ L +   +  LD+  NKL+                         +P+ I  L  L  L
Sbjct: 195 PDSLQNLRHLKVLDLRHNKLS------------------------EIPDVIYKLHTLTTL 230

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CV 270
            L  NRI  +  ++    +L    +  N +  LPA +G L  L TLDL  N LK     +
Sbjct: 231 YLRFNRIRIVGDNLKNLSNLTMLSLRENKIHELPAAIGHLVNLTTLDLSHNHLKHLPKAI 290

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             C + L+ LDL +N L  +P  IG ++ L +L L  N L ++ ++L N
Sbjct: 291 GNC-VNLTALDLQHNDLLDIPETIGNLSNLMRLGLRYNQLTSIPATLRN 338


>gi|156550592|ref|XP_001603998.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Nasonia
           vitripennis]
          Length = 582

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 198/398 (49%), Gaps = 30/398 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ VYK                L  L L  N +  + +++RNL  LT+L
Sbjct: 175 LDLRHNKLNEIPDVVYK-------------LTSLTTLFLRFNRVRYVSDNIRNLTNLTML 221

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELPA IG+L  L + DVS N +  +P EIG+   L   D   N+L ++P ++
Sbjct: 222 SLRENKIKELPAGIGKLTNLVTFDVSHNHLEHLPAEIGNCDQLSTLDLQHNELLDIPETI 281

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  ++++      N ++S+P+ LA+C  M +  VEGN+++ L + L++S + L  +  S+
Sbjct: 282 GNLVSVTRLGLRYNRLSSIPKSLANCKLMDEFSVEGNQVSQLPDGLLSSLSNLKTITLSR 341

Query: 194 NLLNGMPETIGS-LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P    S  + +  ++L  N+I  IP  I S   +L +  M  N L+ALP + G 
Sbjct: 342 NAFTAYPSGGPSQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQLTALPLDTGT 401

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +NQL +   +   L+ L +L LSNN L  +P  I  ++ LR L L  N +
Sbjct: 402 WINMVELNLGTNQLVKIPDDIQYLQNLEILILSNNLLKRIPASIASLSKLRVLDLEENKI 461

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +L         P  + +LR        S   T+    I   T L+     LS+   NL+
Sbjct: 462 ESL---------PNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLT----HLSVGENNLN 508

Query: 371 AIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQV 407
            +P EI     +  L ++ N+ +  LP EL+ C +L +
Sbjct: 509 YLPEEIGTLENLDCLYINDNANLHNLPFELALCTNLSI 546



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 144/310 (46%), Gaps = 22/310 (7%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
            K LD+S +SI  +P+ +   T LV+F    N+L  LP  +G   NL     S N +TSL
Sbjct: 103 FKRLDLSKSSITNLPNSVRDLTHLVEFYLYGNKLVTLPPEIGCLANLKTLALSENSLTSL 162

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+ L +  ++  LD+  NKL  +  +++   T LT L    N +  + + I +L+ L  L
Sbjct: 163 PDTLENLKQLKVLDLRHNKLNEIP-DVVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTML 221

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +N+I  +P+ I    +L  F + +N L  LPAE+G   +L TLDL  N+L +     
Sbjct: 222 SLRENKIKELPAGIGKLTNLVTFDVSHNHLEHLPAEIGNCDQLSTLDLQHNELLDIPETI 281

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLK 327
             L  ++ L L  N LS +P  +     + +  + GN +  L     SSL N  T  L +
Sbjct: 282 GNLVSVTRLGLRYNRLSSIPKSLANCKLMDEFSVEGNQVSQLPDGLLSSLSNLKTITLSR 341

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLD 386
              +  P    S+ +                   ++LE   +  IP  I+  A  +TKL+
Sbjct: 342 NAFTAYPSGGPSQFTNV---------------YSINLEHNKIDKIPYGIFSRAKNLTKLN 386

Query: 387 LSRNSIQELP 396
           +  N +  LP
Sbjct: 387 MKENQLTALP 396



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 142/338 (42%), Gaps = 77/338 (22%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           ++HN++E L  ++ N   L+ L++ HN+L ++P  IG L  +  L + +N +  IP  + 
Sbjct: 246 VSHNHLEHLPAEIGNCDQLSTLDLQHNELLDIPETIGNLVSVTRLGLRYNRLSSIPKSLA 305

Query: 112 SATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPED--------------- 155
           +   + +F    NQ+ +LP  L   L NL     S N  T+ P                 
Sbjct: 306 NCKLMDEFSVEGNQVSQLPDGLLSSLSNLKTITLSRNAFTAYPSGGPSQFTNVYSINLEH 365

Query: 156 ----------LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL---------------- 189
                      +    ++KL+++ N+LT L  +   +W  + EL                
Sbjct: 366 NKIDKIPYGIFSRAKNLTKLNMKENQLTALPLD-TGTWINMVELNLGTNQLVKIPDDIQY 424

Query: 190 -------IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                  I S NLL  +P +I SLS+L  LDL +N+I S+P+ I     L +  + +N +
Sbjct: 425 LQNLEILILSNNLLKRIPASIASLSKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQV 484

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-------------------------L 277
           ++LP  +G L+ L  L +  N L     E   L                          L
Sbjct: 485 TSLPRAIGHLTNLTHLSVGENNLNYLPEEIGTLENLDCLYINDNANLHNLPFELALCTNL 544

Query: 278 SVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGNPLRTL 313
           S++ + N  LS +PPEI  G  + + + L    P R++
Sbjct: 545 SIMSIENCPLSQIPPEIVAGGPSLVIQFLKMQGPYRSM 582


>gi|124008181|ref|ZP_01692878.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123986280|gb|EAY26102.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 391

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 153/298 (51%), Gaps = 15/298 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L ++P E+         GD       LQKLIL++N +EKL  ++  L  L  L
Sbjct: 89  LNLQQNKLTELPPEI---------GD----LTKLQKLILSNNQLEKLPPEIGKLTHLLEL 135

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            VS N+L+ LP  IG+L  L+ L +  N ++ +P EIG    L +     NQL +LP+S+
Sbjct: 136 RVSANRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHNQLTQLPASI 195

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     +NN +  LP ++     +    +  N+L  L    I +   L +L    
Sbjct: 196 GKLNNLQSLILNNNRVNQLPHEIGQLKNLHTFYLANNRLKELPQE-ILTLQNLKKLYLVG 254

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  +  L +L  LDL +N    +P++I+   +L + ++ NN L++L AE+GKL 
Sbjct: 255 NQLQQLPPQLAKLDKLQILDLQKNNFSEVPAAITKLTNLQKLWLNNNQLTSLNAEIGKLQ 314

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L  L L  N++ E       ++ L  L LS+N L+ LP EIG++  L+ L L  N L
Sbjct: 315 NLQILYLEENKITELPTSIGSIQSLKHLSLSDNMLTSLPQEIGQLRKLQALYLRNNQL 372



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 144/273 (52%), Gaps = 2/273 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           D+  + LA+ ++  L + +     L VLN+  NKL+ELP  IG+L  L+ L +S N + K
Sbjct: 62  DVYMMKLANKDMLVLSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEK 121

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG  T L++   S+N+L  LP  +G+  +L      NN + +LP ++   +++ +L
Sbjct: 122 LPPEIGKLTHLLELRVSANRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRL 181

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +E N+LT L  + I     L  LI + N +N +P  IG L  L    L  NR+  +P  
Sbjct: 182 FLEHNQLTQLPAS-IGKLNNLQSLILNNNRVNQLPHEIGQLKNLHTFYLANNRLKELPQE 240

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    +L + Y+  N L  LP +L KL KL  LDL  N   E      +L  L  L L+N
Sbjct: 241 ILTLQNLKKLYLVGNQLQQLPPQLAKLDKLQILDLQKNNFSEVPAAITKLTNLQKLWLNN 300

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           N L+ L  EIGK+  L+ L L  N +  L +S+
Sbjct: 301 NQLTSLNAEIGKLQNLQILYLEENKITELPTSI 333



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 138/307 (44%), Gaps = 36/307 (11%)

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           +I     L   +   N+L ELP  +G    L     SNN +  LP ++   + + +L V 
Sbjct: 79  KIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKLPPEIGKLTHLLELRVS 138

Query: 169 GNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPETIGSL 206
            N+LT L                +N L      I     L  L    N L  +P +IG L
Sbjct: 139 ANRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHNQLTQLPASIGKL 198

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           + L  L L+ NR+  +P  I    +L  FY+ NN L  LP E+  L  L  L L  NQL+
Sbjct: 199 NNLQSLILNNNRVNQLPHEIGQLKNLHTFYLANNRLKELPQEILTLQNLKKLYLVGNQLQ 258

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           +   +  +L +L +LDL  N+ S +P  I K+T L+KL L  N L +L + +       +
Sbjct: 259 QLPPQLAKLDKLQILDLQKNNFSEVPAAITKLTNLQKLWLNNNQLTSLNAEIGKLQNLQI 318

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           L YL     EN+ +E  T+   + ++        K LSL    L+++P EI +  ++  L
Sbjct: 319 L-YLE----ENKITELPTSIGSIQSL--------KHLSLSDNMLTSLPQEIGQLRKLQAL 365

Query: 386 DLSRNSI 392
            L  N +
Sbjct: 366 YLRNNQL 372



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 38/282 (13%)

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           L   + R  NL       N +T LP ++ D +K+ KL +  N+L  L    I   T L E
Sbjct: 76  LSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKLPPE-IGKLTHLLE 134

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S N L  +P  IG L  L  L +  N+++++P  I     L   ++ +N L+ LPA 
Sbjct: 135 LRVSANRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHNQLTQLPAS 194

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +GKL+ L +L L++N++ +   E  QL+ L    L+NN L  LP EI  +  L+KL L G
Sbjct: 195 IGKLNNLQSLILNNNRVNQLPHEIGQLKNLHTFYLANNRLKELPQEILTLQNLKKLYLVG 254

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L+ L         P L K  + ++                            L L+  
Sbjct: 255 NQLQQL--------PPQLAKLDKLQI----------------------------LDLQKN 278

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           N S +P+ I +   + KL L+ N +  L  E+    +LQ+ +
Sbjct: 279 NFSEVPAAITKLTNLQKLWLNNNQLTSLNAEIGKLQNLQILY 320



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 38/266 (14%)

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
            K +N  +  L + +A    +  L+++ NKLT L    I   T L +LI S N L  +P 
Sbjct: 66  MKLANKDMLVLSKKIARFKNLQVLNLQQNKLTELPPE-IGDLTKLQKLILSNNQLEKLPP 124

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L+ L+ L +  NR+ ++P  I    SL   Y+ NN L  LP E+G+L++L  L L 
Sbjct: 125 EIGKLTHLLELRVSANRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLE 184

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            NQL +      +L  L  L L+NN ++ LP EIG++  L    L  N L+ L       
Sbjct: 185 HNQLTQLPASIGKLNNLQSLILNNNRVNQLPHEIGQLKNLHTFYLANNRLKEL------- 237

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                                    ++++T+        K+L L G  L  +P ++ +  
Sbjct: 238 ------------------------PQEILTLQNL-----KKLYLVGNQLQQLPPQLAKLD 268

Query: 381 EITKLDLSRNSIQELPPELSSCASLQ 406
           ++  LDL +N+  E+P  ++   +LQ
Sbjct: 269 KLQILDLQKNNFSEVPAAITKLTNLQ 294



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 17/220 (7%)

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
           +A+K++L  + + I     L  L+L QN++  +P  I     L +  + NN L  LP E+
Sbjct: 68  LANKDML-VLSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKLPPEI 126

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           GKL+ L  L + +N+L     E  +L+ L  L + NN L  LPPEIG++  L++L L  N
Sbjct: 127 GKLTHLLELRVSANRLTTLPPEIGKLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHN 186

Query: 309 PLRTLRSSLVNGPTPALLKYLRSR-LPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
            L  L +S+        L  L+S  L  N  ++       L  + T          L   
Sbjct: 187 QLTQLPASI------GKLNNLQSLILNNNRVNQLPHEIGQLKNLHT--------FYLANN 232

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            L  +P EI     + KL L  N +Q+LPP+L+    LQ+
Sbjct: 233 RLKELPQEILTLQNLKKLYLVGNQLQQLPPQLAKLDKLQI 272



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 13/171 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +  L+N  L+++P E+                 +L+KL L  N +++L   L  L  L +
Sbjct: 226 TFYLANNRLKELPQEI-------------LTLQNLKKLYLVGNQLQQLPPQLAKLDKLQI 272

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N  SE+PAAI +L  L+ L ++ N +  +  EIG    L       N++ ELP+S
Sbjct: 273 LDLQKNNFSEVPAAITKLTNLQKLWLNNNQLTSLNAEIGKLQNLQILYLEENKITELPTS 332

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           +G   +L     S+N +TSLP+++    K+  L +  N+L       I  W
Sbjct: 333 IGSIQSLKHLSLSDNMLTSLPQEIGQLRKLQALYLRNNQLPKDEKAKIKEW 383


>gi|194745132|ref|XP_001955046.1| GF16442 [Drosophila ananassae]
 gi|190628083|gb|EDV43607.1| GF16442 [Drosophila ananassae]
          Length = 1847

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   + D+P+++           K  ++  LQ    + N I KL      L  LTVL
Sbjct: 88  LDVSRNDIPDIPDDI-----------KHLQS--LQVADFSSNPIPKLPSGFSQLKNLTVL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+ LPA  G L  L+SL++  N +  +P+ I   T L + D   N++++LP  L
Sbjct: 135 GLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L +    +N +  LP +L   +K++ LDV  N+L  L N  I+    LT+L  ++
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNE-ISGLVSLTDLDLAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +P+ I  LSRL  L L QNR+  +  ++  C ++ E  +  N LS LP  +G+++
Sbjct: 254 NLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCVNMQELILTENFLSELPPSIGQMT 313

Query: 254 KLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L++  N L+   +E  Q   L VL L +N L  LPPE+G  T L  L ++GN L  
Sbjct: 314 KLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLY 373

Query: 313 LRSSLVN 319
           L  SLVN
Sbjct: 374 LPYSLVN 380



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 171/365 (46%), Gaps = 44/365 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N+I  L ++   L  L  L +S N+++ LP  I     L  LDVS N I  I
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEINRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+I    +L   D SSN + +LPS   +  NL+    ++  +T+LP D           
Sbjct: 99  PDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADF---------- 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                          S T L  L   +NLL  +PETI  L++L RLDL  N I  +P  +
Sbjct: 149 --------------GSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L E ++ +N L  LP ELG L+KL  LD+  N+L+E   E   L  L+ LDL+ N
Sbjct: 195 GYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL---VNGPTPALLKYLRSRLPENEDSEAS 342
            L  LP  I K++ L  L L  N L+ L  +L   VN     L +   S LP +      
Sbjct: 255 LLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCVNMQELILTENFLSELPPS------ 308

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I   T+LS     L+++   L  +P EI +   +  L L  N ++ LPPEL +C
Sbjct: 309 ------IGQMTKLS----NLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNC 358

Query: 403 ASLQV 407
             L V
Sbjct: 359 TVLHV 363



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 179/409 (43%), Gaps = 56/409 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + IL+ +RT   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  EEILRYSRTLEELFLDANHIRDLP----KNF---------FRLHRLRKLGLSDNEINRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I K+P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP+  G    L   +   N +  LPE ++  +K+ +LD+  N++  L   L  
Sbjct: 137 NDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYL-G 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  +G L++L  LD+ +NR+  +P+ ISG  SL +  +  N 
Sbjct: 196 YLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNL 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L  LP  + KLS+L  L L  N+L+     +  C + +  L L+ N LS LPP IG+MT 
Sbjct: 256 LETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNC-VNMQELILTENFLSELPPSIGQMTK 314

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N                 L+YL                   I     L V  
Sbjct: 315 LSNLNVDRN----------------ALEYLPLE----------------IGQCANLGV-- 340

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             LSL    L  +P E+     +  LD+S N +  LP    S  +LQ+K
Sbjct: 341 --LSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLP---YSLVNLQLK 384



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 131/239 (54%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ +LP  +G L  L  L +  N + ++
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G  T L   D S N+L+ELP+ +   ++L+D   + N + +LP+ +A  S+++ L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L N+ + +   + ELI ++N L+ +P +IG +++L  L++ +N +  +P  I
Sbjct: 274 LDQNRLQRL-NDTLGNCVNMQELILTENFLSELPPSIGQMTKLSNLNVDRNALEYLPLEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C +L    + +N L  LP ELG  + L  LD+  NQL         L+L  + LS N
Sbjct: 333 GQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVWLSEN 391



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 21/194 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S   L ++PNE+                V L  L LA N +E L + +  L  LT+L
Sbjct: 226 LDVSENRLEELPNEISG-------------LVSLTDLDLAQNLLETLPDGIAKLSRLTIL 272

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  L   +G    ++ L ++ N + ++P  IG  T L   +   N L+ LP  +
Sbjct: 273 KLDQNRLQRLNDTLGNCVNMQELILTENFLSELPPSIGQMTKLSNLNVDRNALEYLPLEI 332

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI-----ASWTMLTE 188
           G+C NL      +N +  LP +L +C+ +  LDV GN+L  L  +L+     A W  L+E
Sbjct: 333 GQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVNLQLKAVW--LSE 390

Query: 189 LIASKNLLNGMPET 202
              S+ LL   P+T
Sbjct: 391 -NQSQPLLTFQPDT 403


>gi|194743364|ref|XP_001954170.1| GF16883 [Drosophila ananassae]
 gi|261277884|sp|B3LWU3.1|SUR8_DROAN RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|190627207|gb|EDV42731.1| GF16883 [Drosophila ananassae]
          Length = 641

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 186/396 (46%), Gaps = 52/396 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 234 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N +TS+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 341 GNLKSLVRLGMRYNRLTSVPATLKNCKCMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 400

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P       + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G 
Sbjct: 401 NQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGT 460

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N +
Sbjct: 461 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRI 520

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL   +       LL  L                              + L L+   ++
Sbjct: 521 ETLPHEI------GLLHEL------------------------------QRLILQTNQIT 544

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P  I   G +T L +S N++Q LP E+ S  SL+
Sbjct: 545 MLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 580



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 171/364 (46%), Gaps = 39/364 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           +++L L+ ++I  +   +++   +T L +  NK+ +LP  IG L  L++L ++ NS+  +
Sbjct: 162 IKRLDLSKSSITVIPSTVKDCVQITELYLYSNKIGQLPPEIGCLVNLRNLALNENSLTSL 221

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ + +   L   D   N+L E+P  + R  +L+      N IT++ +DL     ++ L 
Sbjct: 222 PESLQNCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLS 281

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK+  L +  I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI
Sbjct: 282 LRENKIRELGS-AIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSN 284
               SL    M  N L+++PA L     +   ++  N + +    + A    L+ + LS 
Sbjct: 341 GNLKSLVRLGMRYNRLTSVPATLKNCKCMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 400

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEAST 343
           N  +  P              TG P +      +N      L++ R  ++P    S A  
Sbjct: 401 NQFTSYP--------------TGGPAQFTNVYSIN------LEHNRIDKIPYGIFSRAKG 440

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                    T+L++       E M L+A+P +I     + +L+L+ N++Q+LP ++ +  
Sbjct: 441 --------LTKLNMK------ENM-LTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQ 485

Query: 404 SLQV 407
           +L++
Sbjct: 486 NLEI 489


>gi|157124572|ref|XP_001654111.1| shoc2 [Aedes aegypti]
 gi|108873917|gb|EAT38142.1| AAEL009928-PA [Aedes aegypti]
          Length = 472

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 179/371 (48%), Gaps = 31/371 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ +YK                L  L L  N I+ + ++L+NL  LT+L
Sbjct: 112 LDLRHNKLSEIPDVIYK-------------LHTLTTLYLRFNRIKVVGDNLKNLSHLTML 158

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELP+AIG L  L +LD+S N +  +P EIG+   L   D   N L ++P ++
Sbjct: 159 SLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETI 218

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL       N +TS+P  L +C+ M + +VEGN ++ L + L+AS + LT +  S+
Sbjct: 219 GNLANLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSR 278

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           N  +  P       + ++ L+   N +  +P  I    +L    + NN L  +P  +G L
Sbjct: 279 NAFHSYPSGGPAQFTNMVELNFGTNSLTKLPDDIHCLQNLEILILSNNVLKRIPNTIGNL 338

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            KL  LDL  N+L+    E   L  L  L L +N L+ LP  IG +T L  L +  N L+
Sbjct: 339 KKLRVLDLEENRLESLPSEIGLLHDLQKLILQSNQLTSLPRTIGHLTNLTYLSVGENNLQ 398

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNL 369
            L         P  +  L     EN +S        L+ +   L++      +S+E   L
Sbjct: 399 FL---------PEEIGTL-----ENLESLYINDNASLVKLPYELALCQNLAIMSIENCPL 444

Query: 370 SAIPSEIWEAG 380
           SA+P E+   G
Sbjct: 445 SALPPEVVGGG 455



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 181/364 (49%), Gaps = 40/364 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N++  L + L+NL  L VL++ HNKLSE+P  I +LH L +L + FN I  
Sbjct: 85  NLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKV 144

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D + + + L       N++ ELPS++G  +NL+    S+N +  LP ++ +C  ++ L
Sbjct: 145 VGDNLKNLSHLTMLSLRENKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTAL 204

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N L                          +PETIG+L+ L+RL L  N++ SIP S
Sbjct: 205 DLQHNDLL------------------------DIPETIGNLANLMRLGLRYNQLTSIPVS 240

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCV--EACQLRLSVLDL 282
           +  C  + EF +  N +S LP   L  LS L T+ L  N    Y     A    +  L+ 
Sbjct: 241 LKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNMVELNF 300

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
             NSL+ LP +I  +  L  L+L+ N L+ + +++ N      LK LR    E    E+ 
Sbjct: 301 GTNSLTKLPDDIHCLQNLEILILSNNVLKRIPNTIGN------LKKLRVLDLEENRLESL 354

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
            ++  L+    +L + S +       L+++P  I     +T L +  N++Q LP E+ + 
Sbjct: 355 PSEIGLLHDLQKLILQSNQ-------LTSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTL 407

Query: 403 ASLQ 406
            +L+
Sbjct: 408 ENLE 411


>gi|298241193|ref|ZP_06965000.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297554247|gb|EFH88111.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 349

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 164/320 (51%), Gaps = 16/320 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L++S++ L  VP E+              +   LQ+L L  N + ++  +L  L  L  
Sbjct: 35  TLDISDKGLTQVPAEL-------------GQLRSLQELYLFGNQLREVPAELGQLRSLQE 81

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L ++ N+L E+PA +G+L  L+ L +S N +  IP E+G    L +   S NQL+E+P+ 
Sbjct: 82  LYLAGNQLREVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLREVPTE 141

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           LG+  +L     S N +  +P +L     +  LD+ GN+L  +   L    + L +L  +
Sbjct: 142 LGQLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAEL-GQLSRLEKLYLA 200

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  +G L  L  L L  N++  +P+ +     L E  +  N L+ +P ELG+L
Sbjct: 201 GNQLREVPAELGQLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGIPTELGQL 260

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN-PL 310
             L  L L  NQL+E   E  QLR L +LDLS N L  +P E+G+++ L    +  N  L
Sbjct: 261 CGLQDLYLAGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLHAFCIEDNDQL 320

Query: 311 RTLRSSLVNGPTPALLKYLR 330
            T  S +V+  T A+L +L+
Sbjct: 321 LTPPSEIVSQGTIAILTFLQ 340



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 146/295 (49%), Gaps = 36/295 (12%)

Query: 24  VPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSEL 83
           +PN+V   +D+ G         +L  L ++   + ++  +L  L  L  L +  N+L E+
Sbjct: 21  IPNDV--KYDDLG---------NLITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREV 69

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           PA +G+L  L+ L ++ N + ++P E+G   +L +   S NQL  +P+ LG+   L +  
Sbjct: 70  PAELGQLRSLQELYLAGNQLREVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELY 129

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
            S N +  +P +L     +  LD+ GN+L                          +P  +
Sbjct: 130 LSGNQLREVPTELGQLRDLHMLDLSGNQLRE------------------------VPAEL 165

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L  L  LDL  N++  +P+ +     L + Y+  N L  +PAELG+L  L  L L  N
Sbjct: 166 GQLRDLHMLDLSGNQLREVPAELGQLSRLEKLYLAGNQLREVPAELGQLRGLQELYLSGN 225

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           QL+E   E  QLR L  LDLS N L+G+P E+G++  L+ L L GN LR + + L
Sbjct: 226 QLREVPTELGQLRDLQELDLSGNQLTGIPTELGQLCGLQDLYLAGNQLREVPAEL 280



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 144/303 (47%), Gaps = 22/303 (7%)

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
           D++G+   L+  D S   L ++P+ LG+  +L +     N +  +P +L     + +L +
Sbjct: 28  DDLGN---LITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQELYL 84

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
            GN+L  +   L      L EL  S N L G+P  +G L  L  L L  N++  +P+ + 
Sbjct: 85  AGNQLREVPAEL-GQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLREVPTELG 143

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNS 286
               L    +  N L  +PAELG+L  L  LDL  NQL+E   E  QL RL  L L+ N 
Sbjct: 144 QLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLEKLYLAGNQ 203

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           L  +P E+G++  L++L L+GN LR           P  L  LR         E   +  
Sbjct: 204 LREVPAELGQLRGLQELYLSGNQLRE---------VPTELGQLRDL------QELDLSGN 248

Query: 347 DLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
            L  + T L      ++L L G  L  +P+E+ +  ++  LDLS N ++E+P EL   + 
Sbjct: 249 QLTGIPTELGQLCGLQDLYLAGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSR 308

Query: 405 LQV 407
           L  
Sbjct: 309 LHA 311



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 134/277 (48%), Gaps = 44/277 (15%)

Query: 5   LKAARTSGSLNLSNRSLRDVP---------NEVYKNFDE-AGEGDKWWEAVDLQKLILAH 54
           L   R+   L L+   LR+VP          E+Y + ++  G   +  +   LQ+L L+ 
Sbjct: 73  LGQLRSLQELYLAGNQLREVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSG 132

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N + ++  +L  L  L +L++S N+L E+PA +G+L  L  LD+S N + ++P E+G  +
Sbjct: 133 NQLREVPTELGQLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLS 192

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L K   + NQL+E+P+ LG+   L +   S N +  +P +L     + +LD+ GN+LT 
Sbjct: 193 RLEKLYLAGNQLREVPAELGQLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLT- 251

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
                                  G+P  +G L  L  L L  N++  +P+ +     L  
Sbjct: 252 -----------------------GIPTELGQLCGLQDLYLAGNQLREVPAELGQLRDLHM 288

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
             +  N L  +PAELG+LS+     LH+     +C+E
Sbjct: 289 LDLSGNQLREVPAELGQLSR-----LHA-----FCIE 315


>gi|255071329|ref|XP_002507746.1| predicted protein [Micromonas sp. RCC299]
 gi|226523021|gb|ACO69004.1| predicted protein [Micromonas sp. RCC299]
          Length = 348

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 169/320 (52%), Gaps = 17/320 (5%)

Query: 19  RSLRDVPNEVYKNFDEAGEGDKW----WEAVDLQKLIL-AHNNIEKLKEDLRNLPLLTVL 73
           R+ R +  E+   + EA + + W    WE   + +L L     I  L  ++  L  L+ L
Sbjct: 32  RTWRAMCPELQGRWPEAAQPEDWRGVKWENGRVVELELEGFGLIGALPAEIGRLNALSTL 91

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N++ NKL  LPA IG+L  L+ L++S N +  +P EIG  T+L +     NQL  +P+ +
Sbjct: 92  NLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGLLTSLRQLHLICNQLTSVPAEI 151

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L +   +   + SLP ++   + +  L+++ N LT +    I   T L EL    
Sbjct: 152 GQLTSLKELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAE-IGQLTSLRELHLGG 210

Query: 194 NL-LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           N  L  +P  IG L+ L  LDL +N++ S P+ I    SL E ++ +N  +++PAE+G+L
Sbjct: 211 NWRLTSVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEIGQL 270

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           + L  L L  NQL     E  QL  L  L L +N L+ +P E+G++T+L+KL L  N L 
Sbjct: 271 TSLRELRLGGNQLTSVPSEIGQLTSLKELWLFDNRLTSVPAEMGQLTSLKKLYLRDNLLT 330

Query: 312 TLRSSLVNGPTPALLKYLRS 331
           ++         P +++ LR+
Sbjct: 331 SV---------PTVVRELRA 341



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 133/265 (50%), Gaps = 15/265 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL++  LR +P E+ +                L++L L+ N +  +  ++  L  L  
Sbjct: 90  TLNLTSNKLRSLPAEIGQ-------------LTSLRRLELSSNQLTSVPAEIGLLTSLRQ 136

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+ +PA IG+L  LK L ++   +  +P EI   T+L   +  +N L  +P+ 
Sbjct: 137 LHLICNQLTSVPAEIGQLTSLKELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAE 196

Query: 133 LGRCLNLSDFKASNNC-ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           +G+  +L +     N  +TS+P ++   + +  LD+  N+LT      I     LTEL  
Sbjct: 197 IGQLTSLRELHLGGNWRLTSVPAEIGQLTSLQVLDLSRNQLTSAPAE-IGQLASLTELFL 255

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N    +P  IG L+ L  L L  N++ S+PS I    SL E ++ +N L+++PAE+G+
Sbjct: 256 HDNQFTSVPAEIGQLTSLRELRLGGNQLTSVPSEIGQLTSLKELWLFDNRLTSVPAEMGQ 315

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR 276
           L+ L  L L  N L        +LR
Sbjct: 316 LTSLKKLYLRDNLLTSVPTVVRELR 340



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 144/308 (46%), Gaps = 46/308 (14%)

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP+ +GR   LS    ++N + SLP ++   + + +L++  N+LT +    I   T L +
Sbjct: 78  LPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAE-IGLLTSLRQ 136

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L    N L  +P  IG L+ L  L L    + S+P+ I    SL    + NN L+++PAE
Sbjct: 137 LHLICNQLTSVPAEIGQLTSLKELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAE 196

Query: 249 LGKLSKLGTLDLHSN-QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           +G+L+ L  L L  N +L     E  QL  L VLDLS N L+  P EIG++ +L +L L 
Sbjct: 197 IGQLTSLRELHLGGNWRLTSVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLH 256

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N   ++         PA +  L S                            +EL L G
Sbjct: 257 DNQFTSV---------PAEIGQLTSL---------------------------RELRLGG 280

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF--SDLVTNKESCI---- 420
             L+++PSEI +   + +L L  N +  +P E+    SL+  +   +L+T+  + +    
Sbjct: 281 NQLTSVPSEIGQLTSLKELWLFDNRLTSVPAEMGQLTSLKKLYLRDNLLTSVPTVVRELR 340

Query: 421 -SGCYLYW 427
            +GC + W
Sbjct: 341 AAGCTVGW 348



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 99/218 (45%), Gaps = 38/218 (17%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            L+  +P  IG L+ L  L+L  N++ S+P+ I    SL    + +N L+++PAE+G L+
Sbjct: 73  GLIGALPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGLLT 132

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  QL  L  L L+   L  LP EI ++T+L  L L  N L +
Sbjct: 133 SLRQLHLICNQLTSVPAEIGQLTSLKELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTS 192

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG-MNLSA 371
           +         PA +  L S                            +EL L G   L++
Sbjct: 193 V---------PAEIGQLTSL---------------------------RELHLGGNWRLTS 216

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           +P+EI +   +  LDLSRN +   P E+   ASL   F
Sbjct: 217 VPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELF 254



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 84/170 (49%), Gaps = 37/170 (21%)

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
           G   + ALPAE+G+L+ L TL+L SN+L+    E  QL  L  L+LS+N L+ +P EIG 
Sbjct: 71  GFGLIGALPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGL 130

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +T+LR+L L  N L ++         PA +  L S                         
Sbjct: 131 LTSLRQLHLICNQLTSV---------PAEIGQLTSL------------------------ 157

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              KELSL G  L ++P+EIW+   +  L+L  N +  +P E+    SL+
Sbjct: 158 ---KELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAEIGQLTSLR 204


>gi|255089435|ref|XP_002506639.1| predicted protein [Micromonas sp. RCC299]
 gi|226521912|gb|ACO67897.1| predicted protein [Micromonas sp. RCC299]
          Length = 392

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 162/306 (52%), Gaps = 12/306 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L +N + +L E +  L  LT L +S NKL+ +PA IG+L  LK L ++ N +  +
Sbjct: 70  LWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLRITNNELEDL 129

Query: 107 PDE-IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P + IG  T+L   + S N+L  +P+ +GR  +L+      N +TS+P ++   + ++ L
Sbjct: 130 PGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVL 189

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++GN+LT +    I   T LT L  S N L  +P  IG L+ L  L L  N++ S+P+ 
Sbjct: 190 RLDGNRLTSVPAE-IGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPAE 248

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    SL    +  N L+++PAE+G+L+ L  L L  N+L     E  +L  L  L LS+
Sbjct: 249 IGRLTSLTVLRLDGNRLTSVPAEIGQLTALEGLFLDGNKLTSVPAEIGRLTSLHALFLSD 308

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ +P EIG++T+LR+  L  N L ++         PA +  LR R     D   +  
Sbjct: 309 NKLTSVPAEIGRLTSLREFTLHNNKLTSV---------PAEIWRLRERGYAYLDEGVTIE 359

Query: 345 KEDLIT 350
            E+  T
Sbjct: 360 GENFTT 365



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 138/264 (52%), Gaps = 15/264 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL-KEDLRNLPLLTV 72
           L LS+  L  VP E+              +   L+ L + +N +E L  + +  L  LT 
Sbjct: 96  LFLSDNKLTSVPAEI-------------GQLASLKDLRITNNELEDLPGKIIGRLTSLTG 142

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S N+L+ +PA IG L  L  L +  N +  +P EIG  T+L       N+L  +P+ 
Sbjct: 143 LNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAE 202

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +GR  +L+  + S N +TS+P ++   + ++ L ++GNKLT +    I   T LT L   
Sbjct: 203 IGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPAE-IGRLTSLTVLRLD 261

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L+ L  L L  N++ S+P+ I    SL   ++ +N L+++PAE+G+L
Sbjct: 262 GNRLTSVPAEIGQLTALEGLFLDGNKLTSVPAEIGRLTSLHALFLSDNKLTSVPAEIGRL 321

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR 276
           + L    LH+N+L     E  +LR
Sbjct: 322 TSLREFTLHNNKLTSVPAEIWRLR 345



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 164/329 (49%), Gaps = 27/329 (8%)

Query: 58  EKLKEDLRNLPLLTVLNVSHNKLSEL---PAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           E+L   L +   + VL  +  KL+ L   PA +G L+ L  L++  N + ++P+ I   T
Sbjct: 32  ERLGVVLDDKGRVAVLEWNEKKLASLSPAPADLGRLNALWGLNLRNNELTELPEGISGLT 91

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED-LADCSKMSKLDVEGNKLT 173
           +L     S N+L  +P+ +G+  +L D + +NN +  LP   +   + ++ L++  N+LT
Sbjct: 92  SLTDLFLSDNKLTSVPAEIGQLASLKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRLT 151

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            +    I   T LT L    N L  +P  IG L+ L  L L  NR+ S+P+ I    SL 
Sbjct: 152 SVPAE-IGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLT 210

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
              +  N L+++PAE+G+L+ L  L L  N+L     E  +L  L+VL L  N L+ +P 
Sbjct: 211 YLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPA 270

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDL 348
           EIG++T L  L L GN L ++         PA +  L S     L +N+ +        L
Sbjct: 271 EIGQLTALEGLFLDGNKLTSV---------PAEIGRLTSLHALFLSDNKLTSVPAEIGRL 321

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIW 377
            ++        +E +L    L+++P+EIW
Sbjct: 322 TSL--------REFTLHNNKLTSVPAEIW 342



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 151/320 (47%), Gaps = 37/320 (11%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G + +L+  +    S+   P ++G   AL   +  +N+L ELP  +    +L+D   S+N
Sbjct: 42  GRVAVLEWNEKKLASLSPAPADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDN 101

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +TS+P ++   + +  L +  N+L  L   +I   T LT L  S N L  +P  IG L+
Sbjct: 102 KLTSVPAEIGQLASLKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLT 161

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L L  N++ S+P+ I    SL    +  N L+++PAE+G+L+ L  L L  N+L  
Sbjct: 162 SLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTS 221

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E  +L  L+ L L  N L+ +P EIG++T+L  L L GN L ++         PA +
Sbjct: 222 VPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSV---------PAEI 272

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
             L             T  E L               L+G  L+++P+EI     +  L 
Sbjct: 273 GQL-------------TALEGLF--------------LDGNKLTSVPAEIGRLTSLHALF 305

Query: 387 LSRNSIQELPPELSSCASLQ 406
           LS N +  +P E+    SL+
Sbjct: 306 LSDNKLTSVPAEIGRLTSLR 325



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 122/243 (50%), Gaps = 13/243 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L ++N  L D+P ++                  L  L L+ N +  +  ++  L  LT L
Sbjct: 119 LRITNNELEDLPGKIIGRL------------TSLTGLNLSDNRLTSVPAEIGRLTSLTGL 166

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  NKL+ +PA IG L  L  L +  N +  +P EIG  T+L     S N+L  +P+ +
Sbjct: 167 GLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEI 226

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           GR  +L+      N +TS+P ++   + ++ L ++GN+LT +    I   T L  L    
Sbjct: 227 GRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAE-IGQLTALEGLFLDG 285

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L+ L  L L  N++ S+P+ I    SL EF + NN L+++PAE+ +L 
Sbjct: 286 NKLTSVPAEIGRLTSLHALFLSDNKLTSVPAEIGRLTSLREFTLHNNKLTSVPAEIWRLR 345

Query: 254 KLG 256
           + G
Sbjct: 346 ERG 348



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 148/330 (44%), Gaps = 39/330 (11%)

Query: 82  ELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
           EL  A G   +    +     +  + D+ G    L   +     L   P+ LGR   L  
Sbjct: 13  ELQGAFGFFDVDSKTEEGRERLGVVLDDKGRVAVLEWNEKKLASLSPAPADLGRLNALWG 72

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP- 200
               NN +T LPE ++  + ++ L +  NKLT +    I     L +L  + N L  +P 
Sbjct: 73  LNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAE-IGQLASLKDLRITNNELEDLPG 131

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L+ L  L+L  NR+ S+P+ I    SL    +  N L+++PAE+G+L+ L  L L
Sbjct: 132 KIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRL 191

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             N+L     E  +L  L+ L LS N L+ +P EIG++T+L  L L GN L ++      
Sbjct: 192 DGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSV------ 245

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
              PA +  L                       T L+V    L L+G  L+++P+EI + 
Sbjct: 246 ---PAEIGRL-----------------------TSLTV----LRLDGNRLTSVPAEIGQL 275

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKF 409
             +  L L  N +  +P E+    SL   F
Sbjct: 276 TALEGLFLDGNKLTSVPAEIGRLTSLHALF 305



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 122/261 (46%), Gaps = 39/261 (14%)

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P DL   + +  L++  N+LT L    I+  T LT+L  S N L  +P  IG L+ L  L
Sbjct: 61  PADLGRLNALWGLNLRNNELTELPEG-ISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDL 119

Query: 213 DLHQNRILSIPSSISG-CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            +  N +  +P  I G   SL    + +N L+++PAE+G+L+ L  L L  N+L     E
Sbjct: 120 RITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAE 179

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L  L+VL L  N L+ +P EIG++T+L  L L+GN L ++         PA +  L 
Sbjct: 180 IGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSV---------PAEIGRLT 230

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           S                              L L+G  L+++P+EI     +T L L  N
Sbjct: 231 SL---------------------------TGLGLDGNKLTSVPAEIGRLTSLTVLRLDGN 263

Query: 391 SIQELPPELSSCASLQVKFSD 411
            +  +P E+    +L+  F D
Sbjct: 264 RLTSVPAEIGQLTALEGLFLD 284


>gi|427798975|gb|JAA64939.1| hypothetical protein, partial [Rhipicephalus pulchellus]
          Length = 1144

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 175/346 (50%), Gaps = 35/346 (10%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK---------NFDEAGE-GDKWWEAVDLQKLI 51
           D +L+ ART   L L    +RD+P  +++         N +E  +        ++L  L 
Sbjct: 30  DDVLRYARTLEELLLDANHIRDLPRGLFRLTKLRRLSVNDNEISQLPADIANLMNLVDLD 89

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           ++ N+I+++ E+++ L  L   + S N LS+LPA   +L  L  L ++  S+ ++P + G
Sbjct: 90  VSKNDIQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFG 149

Query: 112 SATALV-----------------------KFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           S + LV                       + D  SN  +ELP  +G+  +L +    +N 
Sbjct: 150 SLSNLVSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVVGQLSSLQELWLDSNE 209

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +++LP+++    ++  LDV  NKL+ L + L      LT+L  S+N L  +PE IG L +
Sbjct: 210 LSTLPKEIGQLRRLMCLDVSENKLSHLPDEL-CDLESLTDLHFSQNYLESLPEDIGRLRK 268

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L    + QNR+ S+P SI  C SL E  + +N L+ LPA +G+L  L  L+   NQL E 
Sbjct: 269 LTIFKVDQNRLGSLPESIGDCVSLQELILTDNLLTELPASIGRLVNLNNLNADCNQLSEL 328

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
             E  QL RL VL L  N L  LPPE G +  L  L ++GN L+ L
Sbjct: 329 PPEIGQLVRLGVLSLRENCLQRLPPETGTLRRLHVLDVSGNRLQNL 374



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 164/368 (44%), Gaps = 43/368 (11%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           A  L++L+L  N+I  L   L  L  L  L+V+ N++S+LPA I  L  L  LDVS N I
Sbjct: 36  ARTLEELLLDANHIRDLPRGLFRLTKLRRLSVNDNEISQLPADIANLMNLVDLDVSKNDI 95

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
            +IP+ I    +L   D SSN L +LP+   +  +L+    ++  +T LP D    S + 
Sbjct: 96  QEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFGSLSNLV 155

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            L++                         +N L G+P +   L +L RLDL  N    +P
Sbjct: 156 SLELR------------------------ENYLKGLPLSFAFLVKLERLDLGSNDFEELP 191

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
             +    SL E ++ +N LS LP E+G+L +L  LD+  N+L     E C L  L+ L  
Sbjct: 192 VVVGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLSHLPDELCDLESLTDLHF 251

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL---VNGPTPALLKYLRSRLPE---- 335
           S N L  LP +IG++  L    +  N L +L  S+   V+     L   L + LP     
Sbjct: 252 SQNYLESLPEDIGRLRKLTIFKVDQNRLGSLPESIGDCVSLQELILTDNLLTELPASIGR 311

Query: 336 -------NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
                  N D    +     I    RL V    LSL    L  +P E      +  LD+S
Sbjct: 312 LVNLNNLNADCNQLSELPPEIGQLVRLGV----LSLRENCLQRLPPETGTLRRLHVLDVS 367

Query: 389 RNSIQELP 396
            N +Q LP
Sbjct: 368 GNRLQNLP 375



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 110/241 (45%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N+ E+L   +  L  L  L +  N+LS LP  IG+L  L  LDVS N + 
Sbjct: 175 VKLERLDLGSNDFEELPVVVGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLS 234

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PDE+    +L     S N L+ LP  +GR   L+ FK   N + SLPE + DC     
Sbjct: 235 HLPDELCDLESLTDLHFSQNYLESLPEDIGRLRKLTIFKVDQNRLGSLPESIGDC----- 289

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                L ELI + NLL  +P +IG L  L  L+   N++  +P 
Sbjct: 290 -------------------VSLQELILTDNLLTELPASIGRLVNLNNLNADCNQLSELPP 330

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I     L    +  N L  LP E G L +L  LD+  N+L+   +    L L  L L+ 
Sbjct: 331 EIGQLVRLGVLSLRENCLQRLPPETGTLRRLHVLDVSGNRLQNLPLTVTALNLKALWLAK 390

Query: 285 N 285
           N
Sbjct: 391 N 391



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 103/237 (43%), Gaps = 39/237 (16%)

Query: 194 NLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           NL N +P+ +   +R L  L L  N I  +P  +     L    + +N +S LPA++  L
Sbjct: 24  NLFN-IPDDVLRYARTLEELLLDANHIRDLPRGLFRLTKLRRLSVNDNEISQLPADIANL 82

Query: 253 SKLGTLDLHSNQLKEY-----------------------CVEACQLR-LSVLDLSNNSLS 288
             L  LD+  N ++E                             QLR L+VL L++ SL+
Sbjct: 83  MNLVDLDVSKNDIQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLT 142

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            LP + G ++ L  L L  N L+ L  S        L+K  R  L        S   E+L
Sbjct: 143 QLPHDFGSLSNLVSLELRENYLKGLPLSFA-----FLVKLERLDL-------GSNDFEEL 190

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             +  +LS + +EL L+   LS +P EI +   +  LD+S N +  LP EL    SL
Sbjct: 191 PVVVGQLS-SLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLSHLPDELCDLESL 246



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 15/197 (7%)

Query: 212 LDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           +D   + + +IP  +     +L E  +  N +  LP  L +L+KL  L ++ N++ +   
Sbjct: 18  IDKRHSNLFNIPDDVLRYARTLEELLLDANHIRDLPRGLFRLTKLRRLSVNDNEISQLPA 77

Query: 271 EACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +   L  L  LD+S N +  +P  I  + +L+    + NPL  L +  V   +  +L   
Sbjct: 78  DIANLMNLVDLDVSKNDIQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGL- 136

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
                   D   +    D  +++  +S+  +E  L+G+ LS          ++ +LDL  
Sbjct: 137 -------NDVSLTQLPHDFGSLSNLVSLELRENYLKGLPLS-----FAFLVKLERLDLGS 184

Query: 390 NSIQELPPELSSCASLQ 406
           N  +ELP  +   +SLQ
Sbjct: 185 NDFEELPVVVGQLSSLQ 201


>gi|351713627|gb|EHB16546.1| Leucine-rich repeat-containing protein 40 [Heterocephalus glaber]
          Length = 488

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/338 (33%), Positives = 179/338 (52%), Gaps = 17/338 (5%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L +  N+L+ LP+AI EL  L+ L+VS N +  +P+E+ +   L       N+L  LP 
Sbjct: 31  LLKIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEVTNLKNLKGLYLQHNELSCLPE 90

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
              +  +L D   SNN +T++P   +  S + +L++  N+L  L    I+    L  L  
Sbjct: 91  GFEQLSSLEDLDLSNNLLTAVPGSFSSLSSLMRLNLSSNQLKNLPAE-ISRMKKLKHLDC 149

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LG 250
           + NLL  +P     +  L  L L +N++  +P  +S C  L E ++G N +  L AE L 
Sbjct: 150 NSNLLETIPPEFAGMESLELLYLRRNKLRFLPEFLS-CRLLKELHVGENQIEMLGAEHLK 208

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            LS +  LDL  N+LK    E   L+ L  LDLSNN +S LP  +G +  L+ L L GNP
Sbjct: 209 HLSSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGNLP-LKFLALEGNP 267

Query: 310 LRTLRSSLVNGPTPALLKYLRSRL----PENEDSEASTTKEDLITMATRLSVTS----KE 361
           LRT+R  ++N  T  +LKYLRS++    P + DS   TT   L +  +R++V +    K 
Sbjct: 268 LRTIRREIINKGTQEVLKYLRSKIKDDGPTHNDSAPDTTAMTLPS-ESRVNVHAIVALKL 326

Query: 362 LSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELP 396
           L       + IP E+++A +   +T ++ S+N + E+P
Sbjct: 327 LDYSDKQTTLIPDEVFDAVKSNVVTSVNFSKNQLCEIP 364



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 140/322 (43%), Gaps = 57/322 (17%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L++L +  N IE L  E L++L  + VL++  NKL  +P  I  L  L+ LD+S N I  
Sbjct: 189 LKELHVGENQIEMLGAEHLKHLSSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISS 248

Query: 106 IPDEIGSATALVKF-----------------DCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           +P  +G+    +KF                   +   LK L S +       +  A +  
Sbjct: 249 LPCSLGNLP--LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPTHNDSAPDTT 306

Query: 149 ITSLPED------------LADCSKMSKLDVEGNKLTVLSNNLIASWTM----LTELIAS 192
             +LP +            L D S      +       + +N++ S       L E+   
Sbjct: 307 AMTLPSESRVNVHAIVALKLLDYSDKQTTLIPDEVFDAVKSNVVTSVNFSKNQLCEIPKR 366

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N LN +PE + SL RL  ++L  NR   +P  +    +L    + NN            
Sbjct: 367 NNFLNSLPEDMKSLIRLQTINLSFNRFKVLPEVLYHIPTLESILISNN------------ 414

Query: 253 SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            ++G+LD    ++ E         L  LDL NN L  +PPE+G   +LR LLL GNP R 
Sbjct: 415 -QVGSLDPQKMKMME--------NLMTLDLQNNDLLQIPPELGNCVSLRTLLLDGNPFRV 465

Query: 313 LRSSLVNGPTPALLKYLRSRLP 334
            R++++   T A+L+YLR R+P
Sbjct: 466 PRAAILMKGTAAVLEYLRDRIP 487



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 116/269 (43%), Gaps = 41/269 (15%)

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
            K  +N +TSLP  + +   + KL+V  NKL +L                        PE
Sbjct: 32  LKIHDNQLTSLPSAIRELENLQKLNVSHNKLKIL------------------------PE 67

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            + +L  L  L L  N +  +P       SL +  + NN L+A+P     LS L  L+L 
Sbjct: 68  EVTNLKNLKGLYLQHNELSCLPEGFEQLSSLEDLDLSNNLLTAVPGSFSSLSSLMRLNLS 127

Query: 262 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
           SNQLK    E  ++ +L  LD ++N L  +PPE   M +L  L L  N LR L   L   
Sbjct: 128 SNQLKNLPAEISRMKKLKHLDCNSNLLETIPPEFAGMESLELLYLRRNKLRFLPEFL--- 184

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
            +  LLK L       E+       E L  +++ L      L L    L ++P EI    
Sbjct: 185 -SCRLLKELHV----GENQIEMLGAEHLKHLSSILV-----LDLRDNKLKSVPDEITLLQ 234

Query: 381 EITKLDLSRNSIQELPPELSSCASLQVKF 409
            + +LDLS N I  LP    S  +L +KF
Sbjct: 235 SLERLDLSNNDISSLP---CSLGNLPLKF 260


>gi|254410000|ref|ZP_05023780.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196183036|gb|EDX78020.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1115

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 205/409 (50%), Gaps = 37/409 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  VP  +              + V+L +L L+ N + ++ E +  L  LT L
Sbjct: 4   LNLSGNQLTQVPESIS-------------QLVNLTELDLSVNQLTQVPESISQLVNLTQL 50

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++SHN+L+++P +I +L  L  L++S N + ++P+ I     L K + S NQL ++  S+
Sbjct: 51  DLSHNQLTQVPESITQLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVSESI 110

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            + +NL+    S N +T  PE ++    +++L +  N+LT +  + I+    LT+L  S 
Sbjct: 111 SQLVNLTQLSLSGNQLTQFPESISQLVNLTQLSLSRNQLTQVPES-ISQLVNLTQLNLSY 169

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +PE+I  L  L +LDL  N++  +P SIS   +L +  +  N L+ +   + +L 
Sbjct: 170 NQLTQVPESISQLVNLTQLDLSVNKLTQVPESISQLVNLTQLNLSYNQLTQVSESISQLV 229

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  N+L +      QL  L+ L LS N L+ +P  I ++  L +L L+ N L  
Sbjct: 230 NLTQLSLSGNKLTQVSESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQ 289

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS--------- 363
           +  S+       L+   +  L  N+ ++ S +   L+ + T+L ++S +L+         
Sbjct: 290 VSESI-----SQLVNLTQLDLSSNQLTQVSESISQLVNL-TQLDLSSNQLTQVSESISQL 343

Query: 364 --LEGMNLS-----AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             L  +NLS      +P  I +   +T L+LS N + ++P  +S   +L
Sbjct: 344 VNLTQLNLSINKLTQVPESISQLVNLTWLNLSDNQLTQVPESISQLVNL 392



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 188/360 (52%), Gaps = 15/360 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           + +L L+ N + ++ E +  L  LT L++S N+L+++P +I +L  L  LD+S N + ++
Sbjct: 1   MTQLNLSGNQLTQVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQV 60

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ I     L K + S NQL ++P S+ + +NL+    S N +T + E ++    +++L 
Sbjct: 61  PESITQLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQLS 120

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+LT    + I+    LT+L  S+N L  +PE+I  L  L +L+L  N++  +P SI
Sbjct: 121 LSGNQLTQFPES-ISQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESI 179

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
           S   +L +  +  N L+ +P  + +L  L  L+L  NQL +      QL  L+ L LS N
Sbjct: 180 SQLVNLTQLDLSVNKLTQVPESISQLVNLTQLNLSYNQLTQVSESISQLVNLTQLSLSGN 239

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ +   I ++  L +L L+GN L  +  S+       L+   +  L +N+ ++ S + 
Sbjct: 240 KLTQVSESISQLVNLTQLSLSGNKLTQVPESI-----SQLVNLTQLSLSDNQLTQVSESI 294

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             L+ +         +L L    L+ +   I +   +T+LDLS N + ++   +S   +L
Sbjct: 295 SQLVNLT--------QLDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNL 346


>gi|418744843|ref|ZP_13301188.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794174|gb|EKR92084.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 511

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 151/306 (49%), Gaps = 15/306 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L N  L+ +P E+             W+   L++L L  N    L +++  L  L  L
Sbjct: 181 LSLVNNRLKTLPKEI-------------WKLQKLKRLYLGDNQFRTLPKEIDQLQNLEDL 227

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +VS+N+L  LP  I +L  LK L +  N +  +P EIG    L     S+NQL  LP  +
Sbjct: 228 DVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLDSLILSNNQLTTLPQEI 287

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L     SNN + +LP+++    ++  L++E N+L  L    I     L +L  S 
Sbjct: 288 GTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQE-IDQLQNLEDLNLSN 346

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ I  L RL  L L    + ++P+ I     L   ++ NN L  LP E+ KL 
Sbjct: 347 NRLKTLPKGIWKLQRLEWLYLEHAHLTTLPNEIGTLQKLQRLFLSNNRLKTLPKEIWKLR 406

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L L +N+L     E  QL+ L  LDLSNN L  LP EIG++ +L  L L+GNP  T
Sbjct: 407 KLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFTT 466

Query: 313 LRSSLV 318
               +V
Sbjct: 467 FPQEIV 472



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 188/397 (47%), Gaps = 27/397 (6%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY +F +A +       ++++ L L+ N +  L  ++  L  L  LN+ +N+L+ L  
Sbjct: 24  NKVYHDFSDALKN-----PMNVRILDLSDNLLITLPNEIGKLENLEKLNLVNNQLAVLVQ 78

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            IG L  L+ L +  N +  +P++IG    L   +  +NQL  L   +G    L      
Sbjct: 79  EIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLE 138

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           NN +T LP+++    K+ KLD+  N+L  L N  I     L  L    N L  +P+ I  
Sbjct: 139 NNQLTVLPQEIGKLQKLEKLDLSDNQLATLPNE-IGQLESLQYLSLVNNRLKTLPKEIWK 197

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L +L RL L  N+  ++P  I    +L +  + NN L  LP E+ KL  L  L L  NQL
Sbjct: 198 LQKLKRLYLGDNQFRTLPKEIDQLQNLEDLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQL 257

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                E  QL  L  L LSNN L+ LP EIG +  L+ L L+ N LRTL   +    T  
Sbjct: 258 TVLPQEIGQLENLDSLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEI---GTLQ 314

Query: 325 LLKYLR------SRLPENEDSEASTTKEDLITMATRLSVTSK---------ELSLEGMNL 369
            L++L       + LP+  D   +   EDL     RL    K          L LE  +L
Sbjct: 315 ELEWLNLEHNQLAALPQEIDQLQNL--EDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHL 372

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           + +P+EI    ++ +L LS N ++ LP E+     L+
Sbjct: 373 TTLPNEIGTLQKLQRLFLSNNRLKTLPKEIWKLRKLE 409



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 185/396 (46%), Gaps = 32/396 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L N  L  +PN++ K                L+ L L +N +  L +++  L  L  L
Sbjct: 89  LSLKNNRLESLPNKIGK-------------LRKLEHLNLENNQLAVLVQEIGTLQKLEWL 135

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  L+ LD+S N +  +P+EIG   +L      +N+LK LP  +
Sbjct: 136 SLENNQLTVLPQEIGKLQKLEKLDLSDNQLATLPNEIGQLESLQYLSLVNNRLKTLPKEI 195

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTELIA 191
            +   L      +N   +LP+++     +  LDV  N+L  L N +   W +  L  L  
Sbjct: 196 WKLQKLKRLYLGDNQFRTLPKEIDQLQNLEDLDVSNNQLVTLPNEI---WKLQNLKWLYL 252

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  L L  N++ ++P  I     L    + NN L  LP E+G 
Sbjct: 253 DDNQLTVLPQEIGQLENLDSLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGT 312

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L +L  L+L  NQL     E  QL+ L  L+LSNN L  LP  I K+  L  L L    L
Sbjct: 313 LQELEWLNLEHNQLAALPQEIDQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHL 372

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL + +  G    L      RL  + +   +  KE  I    +L      L L+   L 
Sbjct: 373 TTLPNEI--GTLQKL-----QRLFLSNNRLKTLPKE--IWKLRKLEW----LYLKNNKLG 419

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           ++P EI +   +  LDLS N ++ LP E+    SL+
Sbjct: 420 SLPKEIDQLQNLEYLDLSNNQLRTLPNEIGQLQSLE 455



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 135/283 (47%), Gaps = 38/283 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L++SN  L  +PNE+             W+  +L+ L L  N +  L +++  L  L  
Sbjct: 226 DLDVSNNQLVTLPNEI-------------WKLQNLKWLYLDDNQLTVLPQEIGQLENLDS 272

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S+N+L+ LP  IG L  L+ L++S N +  +P EIG+   L   +   NQL  LP  
Sbjct: 273 LILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQE 332

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +  NL D   SNN + +LP+ +    ++  L +E   LT L                 
Sbjct: 333 IDQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHLTTL----------------- 375

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P  IG+L +L RL L  NR+ ++P  I     L   Y+ NN L +LP E+ +L
Sbjct: 376 -------PNEIGTLQKLQRLFLSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQL 428

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEI 294
             L  LDL +NQL+    E  QL+ L  LDLS N  +  P EI
Sbjct: 429 QNLEYLDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFTTFPQEI 471


>gi|198433833|ref|XP_002122418.1| PREDICTED: similar to Leucine-rich repeat protein SHOC-2
           (Ras-binding protein Sur-8) [Ciona intestinalis]
          Length = 531

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 189/418 (45%), Gaps = 75/418 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR+VP  VY             +   L+KL L  N I  +   + NL  LT L
Sbjct: 124 LDLRHNKLREVPQVVY-------------QLQSLRKLYLRFNKITTIDPAIENLSNLTQL 170

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  NK+ E+P+ IG+L  L ++DVS+N + +IP+EIG+   +   D   N+L +LP S+
Sbjct: 171 IIRENKVREIPSEIGKLTQLVTIDVSYNELKEIPEEIGNCRLVTFLDLQYNRLTQLPESI 230

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  + L+      N +  LP  L +C  +S L++E N +  L +  ++S T LT +  ++
Sbjct: 231 GNLVKLNRLGLKYNHLLGLPRSLQNCVLLSDLNLENNDIETLPDGFLSSLTNLTSVTLAR 290

Query: 194 NLLNGMP-------------------------ETIGSLSRLIRLDLHQNRILSIPSSISG 228
           N  +  P                         E     + L  L++  N++ S+P  +  
Sbjct: 291 NKFSSYPVGGPSQFTSLGTLNMEHNQVDRIPFEIFSRATHLSTLNMRSNQLTSLPLDVGS 350

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             S+ E  + +N L+ LP ++GKL  L  L + +N L++      QL  L  LDL  N+L
Sbjct: 351 WKSMVELCLNSNQLTRLPDDIGKLQSLQVLMVSNNLLRKIPGSIGQLTNLQCLDLEENNL 410

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             LP EI  +T LRKL L GN L  L         P  L +L +                
Sbjct: 411 ESLPSEIEHLTQLRKLKLQGNKLTVL---------PRGLGHLSN---------------- 445

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                T L+V   +       +  +P+EI     + +L L+ N +Q LP EL+ C  L
Sbjct: 446 ----LTILAVGENQ-------MRDLPNEIGNLKSLEELYLNDNPLQVLPFELALCTKL 492



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 189/409 (46%), Gaps = 66/409 (16%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF-------- 100
           ++ L  N + K+ ++L  L  LT+L ++ N L+ LPA++  L  LK LD+          
Sbjct: 77  EIFLYQNKLAKVPDELGQLVNLTILALNENHLTSLPASLQNLKQLKMLDLRHNKLREVPQ 136

Query: 101 --------------------------------------NSIMKIPDEIGSATALVKFDCS 122
                                                 N + +IP EIG  T LV  D S
Sbjct: 137 VVYQLQSLRKLYLRFNKITTIDPAIENLSNLTQLIIRENKVREIPSEIGKLTQLVTIDVS 196

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N+LKE+P  +G C  ++      N +T LPE + +  K+++L ++ N L  L  +L  +
Sbjct: 197 YNELKEIPEEIGNCRLVTFLDLQYNRLTQLPESIGNLVKLNRLGLKYNHLLGLPRSL-QN 255

Query: 183 WTMLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRILSIP-SSISGCCSLAEFYMGNN 240
             +L++L    N +  +P+  + SL+ L  + L +N+  S P    S   SL    M +N
Sbjct: 256 CVLLSDLNLENNDIETLPDGFLSSLTNLTSVTLARNKFSSYPVGGPSQFTSLGTLNMEHN 315

Query: 241 ALSALPAEL-GKLSKLGTLDLHSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMT 298
            +  +P E+  + + L TL++ SNQL    ++    +  V L L++N L+ LP +IGK+ 
Sbjct: 316 QVDRIPFEIFSRATHLSTLNMRSNQLTSLPLDVGSWKSMVELCLNSNQLTRLPDDIGKLQ 375

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSV 357
           +L+ L+++ N LR +  S+        L  L+   L EN      +  E L  +      
Sbjct: 376 SLQVLMVSNNLLRKIPGSI------GQLTNLQCLDLEENNLESLPSEIEHLTQL------ 423

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             ++L L+G  L+ +P  +     +T L +  N +++LP E+ +  SL+
Sbjct: 424 --RKLKLQGNKLTVLPRGLGHLSNLTILAVGENQMRDLPNEIGNLKSLE 470



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 157/340 (46%), Gaps = 16/340 (4%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++S   L+ L   I  +  L  + +  N + K+PDE+G    L     + N L  LP
Sbjct: 53  TRLDLSQLDLTSLSTTIKNMTQLCEIFLYQNKLAKVPDELGQLVNLTILALNENHLTSLP 112

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           +SL     L      +N +  +P+ +     + KL +  NK+T + +  I + + LT+LI
Sbjct: 113 ASLQNLKQLKMLDLRHNKLREVPQVVYQLQSLRKLYLRFNKITTI-DPAIENLSNLTQLI 171

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             +N +  +P  IG L++L+ +D+  N +  IP  I  C  +    +  N L+ LP  +G
Sbjct: 172 IRENKVREIPSEIGKLTQLVTIDVSYNELKEIPEEIGNCRLVTFLDLQYNRLTQLPESIG 231

Query: 251 KLSKLGTLDLHSNQL--KEYCVEACQLRLSVLDLSNNSLSGLPPE-IGKMTTLRKLLLTG 307
            L KL  L L  N L      ++ C L LS L+L NN +  LP   +  +T L  + L  
Sbjct: 232 NLVKLNRLGLKYNHLLGLPRSLQNCVL-LSDLNLENNDIETLPDGFLSSLTNLTSVTLAR 290

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N      S  V GP+    ++        E ++      ++ + AT LS     L++   
Sbjct: 291 N---KFSSYPVGGPS----QFTSLGTLNMEHNQVDRIPFEIFSRATHLST----LNMRSN 339

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            L+++P ++     + +L L+ N +  LP ++    SLQV
Sbjct: 340 QLTSLPLDVGSWKSMVELCLNSNQLTRLPDDIGKLQSLQV 379


>gi|255080390|ref|XP_002503775.1| predicted protein [Micromonas sp. RCC299]
 gi|226519042|gb|ACO65033.1| predicted protein [Micromonas sp. RCC299]
          Length = 406

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 186/379 (49%), Gaps = 29/379 (7%)

Query: 37  EGDKWWEAVDLQKLILAHNNIE------KLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL 90
           E  ++WE V ++   +   ++E       +  ++  LP L  L++ HN+L+ LPA IG+L
Sbjct: 13  EQPEYWEGVTIENGRVVELDLEDVGLTGAVPAEVGQLPSLVKLSLRHNQLTSLPAEIGQL 72

Query: 91  HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCIT 150
             L  L ++ N +  +P EIG   +L     + NQL  +P+ + +  +L       N +T
Sbjct: 73  PSLTRLWLAGNQLTSLPAEIGQLMSLEGLFLNGNQLTSVPAEIWQLTSLRALNLYGNQLT 132

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           S+PE++   + + +L + GN+LT      I   + L  L  S N    +P  IG L+ L 
Sbjct: 133 SVPEEIGQLTSLRRLFLSGNQLTS-----IGLLSALRGLGVSGNQRTSVPAEIGQLTSLE 187

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            L+LH N++ S+P+ I    SL    +  N L++LPA +G+L+ L  L L  N+L     
Sbjct: 188 VLELHYNQLTSVPAEIGQLASLKWLNLHGNQLTSLPAGIGQLTSLTYLFLDDNRLTSLPA 247

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E  QL  L  L L +N L+ LP EIG++ +L  L L GN L +L         PA +  L
Sbjct: 248 EIGQLTSLERLYLRHNQLTSLPAEIGQLASLEWLYLEGNQLTSL---------PAGIGQL 298

Query: 330 RS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            S   L  NE+   S   E  I   T L    K L L    L+++P+EI +   + +L L
Sbjct: 299 TSLTYLYLNENQLTSLPAE--IGQLTSL----KALGLNYNQLTSVPAEIGQLAALRELGL 352

Query: 388 SRNSIQELPPELSSCASLQ 406
             N +  +P E+     L+
Sbjct: 353 FENQLTSVPAEIGQLTLLE 371



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 172/353 (48%), Gaps = 23/353 (6%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L KL L HN +  L  ++  LP LT L ++ N+L+ LPA IG+L  L+ L ++ N +  +
Sbjct: 52  LVKLSLRHNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPAEIGQLMSLEGLFLNGNQLTSV 111

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EI   T+L   +   NQL  +P  +G+  +L     S N +TS+       S +  L 
Sbjct: 112 PAEIWQLTSLRALNLYGNQLTSVPEEIGQLTSLRRLFLSGNQLTSI----GLLSALRGLG 167

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V GN+ T +    I   T L  L    N L  +P  IG L+ L  L+LH N++ S+P+ I
Sbjct: 168 VSGNQRTSVPAE-IGQLTSLEVLELHYNQLTSVPAEIGQLASLKWLNLHGNQLTSLPAGI 226

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               SL   ++ +N L++LPAE+G+L+ L  L L  NQL     E  QL  L  L L  N
Sbjct: 227 GQLTSLTYLFLDDNRLTSLPAEIGQLTSLERLYLRHNQLTSLPAEIGQLASLEWLYLEGN 286

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--RLPENEDSEAST 343
            L+ LP  IG++T+L  L L  N L +L         PA +  L S   L  N +   S 
Sbjct: 287 QLTSLPAGIGQLTSLTYLYLNENQLTSL---------PAEIGQLTSLKALGLNYNQLTSV 337

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
             E     A R      EL L    L+++P+EI +   +  L+L  N +   P
Sbjct: 338 PAEIGQLAALR------ELGLFENQLTSVPAEIGQLTLLEGLELRHNRLTSEP 384



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 154/320 (48%), Gaps = 28/320 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L L+   L  VP E+             W+   L+ L L  N +  + E++  L  L  
Sbjct: 100 GLFLNGNQLTSVPAEI-------------WQLTSLRALNLYGNQLTSVPEEIGQLTSLRR 146

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S N+L+    +IG L  L+ L VS N    +P EIG  T+L   +   NQL  +P+ 
Sbjct: 147 LFLSGNQLT----SIGLLSALRGLGVSGNQRTSVPAEIGQLTSLEVLELHYNQLTSVPAE 202

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  +L       N +TSLP  +   + ++ L ++ N+LT L    I   T L  L   
Sbjct: 203 IGQLASLKWLNLHGNQLTSLPAGIGQLTSLTYLFLDDNRLTSLPAE-IGQLTSLERLYLR 261

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L+ L  L L  N++ S+P+ I    SL   Y+  N L++LPAE+G+L
Sbjct: 262 HNQLTSLPAEIGQLASLEWLYLEGNQLTSLPAGIGQLTSLTYLYLNENQLTSLPAEIGQL 321

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           + L  L L+ NQL     E  QL  L  L L  N L+ +P EIG++T L  L L  N L 
Sbjct: 322 TSLKALGLNYNQLTSVPAEIGQLAALRELGLFENQLTSVPAEIGQLTLLEGLELRHNRLT 381

Query: 312 TLRSSLVNGPTPALLKYLRS 331
           +          PA ++ LR+
Sbjct: 382 S---------EPAAIRELRA 392



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 109/219 (49%), Gaps = 18/219 (8%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            L   +P  +G L  L++L L  N++ S+P+ I    SL   ++  N L++LPAE+G+L 
Sbjct: 37  GLTGAVPAEVGQLPSLVKLSLRHNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPAEIGQLM 96

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L+ NQL     E  QL  L  L+L  N L+ +P EIG++T+LR+L L+GN L +
Sbjct: 97  SLEGLFLNGNQLTSVPAEIWQLTSLRALNLYGNQLTSVPEEIGQLTSLRRLFLSGNQLTS 156

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +           LL  LR  L  + +   S   E  I   T L V    L L    L+++
Sbjct: 157 I----------GLLSALRG-LGVSGNQRTSVPAE--IGQLTSLEV----LELHYNQLTSV 199

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           P+EI +   +  L+L  N +  LP  +    SL   F D
Sbjct: 200 PAEIGQLASLKWLNLHGNQLTSLPAGIGQLTSLTYLFLD 238


>gi|113677869|ref|NP_001038251.1| leucine-rich repeat protein SHOC-2 [Danio rerio]
 gi|123888175|sp|Q1L8Y7.1|SHOC2_DANRE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|94732359|emb|CAK04058.1| novel protein similar to vertebrate soc-2 suppressor of clear
           homolog (C. elegans) (SHOC2) [Danio rerio]
 gi|161611878|gb|AAI55580.1| Si:ch211-197i12.3 [Danio rerio]
          Length = 561

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 195/398 (48%), Gaps = 56/398 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P  VY+                L  L L  N I  +++D++NL  LT+L
Sbjct: 153 LDLRHNKLREIPAVVYR-------------VSSLTTLYLRFNRITTVEKDIKNLSKLTML 199

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N L +LP ++
Sbjct: 200 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETI 259

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +++      N ++++P  LA C ++ +L++E N ++VL   L++S   LT L  ++
Sbjct: 260 GNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLAR 319

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 320 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 377

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   + C L  L +L LSNN L  LP  IG +  LR+L L  N
Sbjct: 378 GTWTSMVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEEN 437

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 438 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 461

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L+ +P  I     +T L L  N +Q LP E+ +  +L+
Sbjct: 462 LTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLE 499



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 339 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 398

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  + +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 399 DICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 457

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L + Y+ +N  L +LP EL 
Sbjct: 458 TNNQLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELA 517

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 518 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 555

Query: 309 PLRTL 313
           P R +
Sbjct: 556 PYRAM 560



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 181/400 (45%), Gaps = 68/400 (17%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           +L L+  +I  L   ++ L  LT L +  NKL  LP  +G L  L +L +S NS+  +PD
Sbjct: 83  RLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPD 142

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            + +   L   D   N+L+E+P+ + R  +L+      N IT++ +D+ + SK++ L + 
Sbjct: 143 SLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIR 202

Query: 169 GNK----------------LTVLSNNL------IASWTMLTELIASKNLLNGMPETIGSL 206
            NK                L V  N L      I + T +T L    N L  +PETIG+L
Sbjct: 203 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNL 262

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL----------------- 249
           + + RL L  NR+ +IP S++ C  L E  + NN +S LP  L                 
Sbjct: 263 ASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCF 322

Query: 250 --------GKLSKLGTLDLHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
                    + S + +L++  N++ +  + + +    LS L++ +N L+ LP + G  T+
Sbjct: 323 QSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTS 382

Query: 300 LRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           + +L L  N L  +      LV+     L   L  +LP              I    +L 
Sbjct: 383 MVELNLATNQLTKIPEDICGLVSLEMLTLSNNLLKKLPYG------------IGNLRKL- 429

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
              +EL LE   L ++P+EI    ++ KL L+ N +  LP
Sbjct: 430 ---RELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 466



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++   S +  L +  N LT L 
Sbjct: 82  MRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLP 141

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  +S L  L L  NRI ++   I     L    
Sbjct: 142 DSL-DNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLS 200

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 201 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIG 260

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            + ++ +L L  N L  +  SL 
Sbjct: 261 NLASINRLGLRYNRLSAIPRSLA 283



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 353 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 399

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L +L +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 400 ICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 459

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +  LPE+                        LA C
Sbjct: 460 NQLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALC 519

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 520 SKLSIMSIENCPLSHLPPQIVA 541



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 14/197 (7%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LP E+G LS L TL L  N L    
Sbjct: 82  MRLDLSKRSIHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLP 141

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L +L +LDL +N L  +P  + ++++L  L L  N + T+   + N     L K 
Sbjct: 142 DSLDNLKKLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDIKN-----LSKL 196

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               + EN+  +      +L  + T        L +    L  +P EI    +IT LDL 
Sbjct: 197 TMLSIRENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCTQITNLDLQ 248

Query: 389 RNSIQELPPELSSCASL 405
            N + +LP  + + AS+
Sbjct: 249 HNDLLDLPETIGNLASI 265


>gi|418755283|ref|ZP_13311490.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964294|gb|EKO32184.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 557

 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 198/432 (45%), Gaps = 58/432 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L N  L  +PN++ K                L+ L L +N +  L +++  L  L  L
Sbjct: 89  LSLKNNRLESLPNKIGK-------------LRKLEHLNLENNQLAVLVQEIGTLQKLEWL 135

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L  LP  IG+L  L+ L++  N +  +  EIG+   L      +N+L+ LP+ +
Sbjct: 136 SLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKI 195

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+   L      +N +  L +++    K+  L +E N+LTVL    I     L  L    
Sbjct: 196 GKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQE-IGKLQKLEVLCLKN 254

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG+L RL  L L  NR+ ++P  I    +L + Y+G+N    LP E+ +L 
Sbjct: 255 NKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNLKDLYLGDNQFRTLPKEIDQLQ 314

Query: 254 KLGTLDLHSNQLKEYCVEACQLR------------------------LSVLDLSNNSLSG 289
            L  LD+ +NQL     E  +L+                        L  L LSNN L+ 
Sbjct: 315 NLEGLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNNQLTT 374

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR------SRLPENEDSEAST 343
           LP EIG +  L+ L L+ N LRTL   +    T   L++L       + LP+  D   + 
Sbjct: 375 LPQEIGTLQKLQYLNLSNNQLRTLPQEI---GTLQELEWLNLEHNQLAALPQEIDQLQNL 431

Query: 344 TKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
             EDLI    RL    KE         L L+   L ++P EI +   +  LDLS N ++ 
Sbjct: 432 --EDLILSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNNQLRT 489

Query: 395 LPPELSSCASLQ 406
           LP E+    SL+
Sbjct: 490 LPNEIGQLQSLE 501



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 151/306 (49%), Gaps = 15/306 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L N  L  +P E+ K                L+ L L +N +  L +++  L  L  L
Sbjct: 227 LSLENNQLTVLPQEIGK-------------LQKLEVLCLKNNKLGSLPQEIGTLRRLRFL 273

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L  LP  I +L  LK L +  N    +P EI     L   D S+NQL  LP+ +
Sbjct: 274 SLVNNRLKTLPREIWKLQNLKDLYLGDNQFRTLPKEIDQLQNLEGLDVSNNQLVTLPNEI 333

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +  NL      +N +T LP+++     +  L +  N+LT L    I +   L  L  S 
Sbjct: 334 WKLQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNNQLTTLPQE-IGTLQKLQYLNLSN 392

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG+L  L  L+L  N++ ++P  I    +L +  + NN L  LP E+ KL 
Sbjct: 393 NQLRTLPQEIGTLQELEWLNLEHNQLAALPQEIDQLQNLEDLILSNNRLKTLPKEIWKLR 452

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L L +N+L     E  QL+ L  LDLSNN L  LP EIG++ +L  L L+GNP  T
Sbjct: 453 KLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFAT 512

Query: 313 LRSSLV 318
               +V
Sbjct: 513 FPKEIV 518



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 176/384 (45%), Gaps = 24/384 (6%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY +F +A +       ++++ L L+ N +  L  ++  L  L  LN+ +N+LS L  
Sbjct: 24  NKVYHDFSDALKN-----PMNVRILDLSDNQLATLPNEIGKLENLEKLNLVNNQLSVLVQ 78

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            IG L  L+ L +  N +  +P++IG    L   +  +NQL  L   +G    L      
Sbjct: 79  EIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLK 138

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           NN + SLP  +    K+  L++E N+L VL    I +   L  L    N L  +P  IG 
Sbjct: 139 NNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQE-IGTLQKLEWLSLKNNRLESLPNKIGK 197

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L +L  L+L  N++  +   I     L    + NN L+ LP E+GKL KL  L L +N+L
Sbjct: 198 LRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEVLCLKNNKL 257

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                E   L RL  L L NN L  LP EI K+  L+ L L  N  RTL   +       
Sbjct: 258 GSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNLKDLYLGDNQFRTLPKEI------- 310

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEI 382
                  +L   E  + S  +  L+T+   +      K L L+   L+ +P EI +   +
Sbjct: 311 ------DQLQNLEGLDVSNNQ--LVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENL 362

Query: 383 TKLDLSRNSIQELPPELSSCASLQ 406
             L LS N +  LP E+ +   LQ
Sbjct: 363 ESLILSNNQLTTLPQEIGTLQKLQ 386



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 144/320 (45%), Gaps = 15/320 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S N +  +P+EIG    L K +  +NQL  L   +G    L      NN + SL
Sbjct: 40  VRILDLSDNQLATLPNEIGKLENLEKLNLVNNQLSVLVQEIGTLQKLEWLSLKNNRLESL 99

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P  +    K+  L++E N+L VL    I +   L  L    N L  +P  IG L +L  L
Sbjct: 100 PNKIGKLRKLEHLNLENNQLAVLVQE-IGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHL 158

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L  N++  +   I     L    + NN L +LP ++GKL KL  L+L  NQL     E 
Sbjct: 159 NLEHNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEI 218

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L +L  L L NN L+ LP EIGK+  L  L L  N L +L   +        L  + +
Sbjct: 219 GTLQKLEWLSLENNQLTVLPQEIGKLQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVNN 278

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
           RL         T   ++  +        K+L L       +P EI +   +  LD+S N 
Sbjct: 279 RL--------KTLPREIWKLQN-----LKDLYLGDNQFRTLPKEIDQLQNLEGLDVSNNQ 325

Query: 392 IQELPPELSSCASLQVKFSD 411
           +  LP E+    +L+  + D
Sbjct: 326 LVTLPNEIWKLQNLKWLYLD 345



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 138/296 (46%), Gaps = 18/296 (6%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R    L+L N  L+ +P E+             W+  +L+ L L  N    L +++  L 
Sbjct: 268 RRLRFLSLVNNRLKTLPREI-------------WKLQNLKDLYLGDNQFRTLPKEIDQLQ 314

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS+N+L  LP  I +L  LK L +  N +  +P EIG    L     S+NQL  
Sbjct: 315 NLEGLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNNQLTT 374

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP  +G    L     SNN + +LP+++    ++  L++E N+L  L    I     L +
Sbjct: 375 LPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQE-IDQLQNLED 433

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI S N L  +P+ I  L +L  L L  N++ S+P  I    +L    + NN L  LP E
Sbjct: 434 LILSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNNQLRTLPNE 493

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           +G+L  L  LDL  N    +  E   L+   +    N    +P  + +  T+RKLL
Sbjct: 494 IGQLQSLEDLDLSGNPFATFPKEIVGLKHLKILKLKN----IPALLSEKETIRKLL 545


>gi|417781290|ref|ZP_12429042.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778541|gb|EKR63167.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 591

 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 183/377 (48%), Gaps = 23/377 (6%)

Query: 33  DEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHM 92
           +E G+  K   A+DL+      N    L +++  L  L  LN+  N+L+ LP  + +L  
Sbjct: 111 EEIGQLQKL-RALDLRA-----NQFATLPKEILQLQNLQTLNLDSNELTALPKEMRQLQK 164

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           L+ LD+  N +  +P EIG   +L      +NQ   LP  + +  NL      +N +T+L
Sbjct: 165 LQKLDLRENQLTTLPKEIGQLKSLQTLYLRANQFATLPKEILQLQNLQALNLDSNELTAL 224

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++    K+ KLD+  N+LT L    I     L  L    N L  +PE IG L  L +L
Sbjct: 225 PKEMRQLQKLQKLDLRENQLTTLPKE-IGQLKSLQTLYLLANQLTILPEEIGKLRNLQKL 283

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L +NR  ++P  I    +L   Y+  N L+A P E+ +L  L  L+L  N+L     E 
Sbjct: 284 YLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQNLQILNLSYNRLTTLPEEI 343

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L +L+LS N L+ LP E+GK+  L+ L L    + T    ++       L + R+
Sbjct: 344 GQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSRT 403

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
           +L         TT    I     L    KEL+LE   L+A+P EI     + +L+L+ NS
Sbjct: 404 QL---------TTLPGEIGQMQNL----KELNLEKNQLTALPKEIGRLQNLEELNLNSNS 450

Query: 392 IQ--ELPPELSSCASLQ 406
            Q   LP E+   ++L+
Sbjct: 451 NQFSSLPKEIGQLSNLK 467



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/271 (36%), Positives = 140/271 (51%), Gaps = 4/271 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L  N    L +D+  L  L  L +  N+L+  P  I +L  L+ L++S+N +  
Sbjct: 279 NLQKLYLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQNLQILNLSYNRLTT 338

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L   + S NQL +LP  LG+  NL         IT+ P+++     + KL
Sbjct: 339 LPEEIGQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFPKEILQLQNLEKL 398

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL--HQNRILSIP 223
           +    +LT L    I     L EL   KN L  +P+ IG L  L  L+L  + N+  S+P
Sbjct: 399 NWSRTQLTTLPGE-IGQMQNLKELNLEKNQLTALPKEIGRLQNLEELNLNSNSNQFSSLP 457

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
             I    +L   ++ +N L+ LP E+G+LS+L TL L  N L+    E  QL  L  LDL
Sbjct: 458 KEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFRNSLETLPEEIGQLWNLRELDL 517

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           S N LS +P EIG++  LR L L   PL  L
Sbjct: 518 SYNPLSSIPKEIGQLKNLRILHLRKTPLARL 548



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 164/363 (45%), Gaps = 40/363 (11%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N    L +++  L  L  LN+  N+L+ LP  + +L  L+ LD+  N +  +
Sbjct: 188 LQTLYLRANQFATLPKEILQLQNLQALNLDSNELTALPKEMRQLQKLQKLDLRENQLTTL 247

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG   +L      +NQL  LP  +G+  NL       N  T+LP+D+     +  L 
Sbjct: 248 PKEIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCENRFTTLPKDIGQLQNLQSLY 307

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+LT                          P+ I  L  L  L+L  NR+ ++P  I
Sbjct: 308 LYGNQLT------------------------AFPKEIEQLQNLQILNLSYNRLTTLPEEI 343

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L    +  N L+ LP ELGKL  L TLDLH+ Q+  +  E  QL+ L  L+ S  
Sbjct: 344 GQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSRT 403

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP EIG+M  L++L L  N L  L   +              RL   E+   ++  
Sbjct: 404 QLTTLPGEIGQMQNLKELNLEKNQLTALPKEI-------------GRLQNLEELNLNSNS 450

Query: 346 EDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
               ++   +   S  K L L+   L+ +P EI +   +  L L RNS++ LP E+    
Sbjct: 451 NQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFRNSLETLPEEIGQLW 510

Query: 404 SLQ 406
           +L+
Sbjct: 511 NLR 513



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 152/337 (45%), Gaps = 38/337 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KLS LP  IGEL  L++LD+  N +  +P EI     L       NQL  L  
Sbjct: 52  VLNLSFQKLSTLPKEIGELQNLQTLDLFDNKLTVLPKEILQLQNLQMLGLCCNQLTILSE 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+   L       N   +LP+++     +  L+++ N+LT L    +     L +L  
Sbjct: 112 EIGQLQKLRALDLRANQFATLPKEILQLQNLQTLNLDSNELTALPKE-MRQLQKLQKLDL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N L  +P+ IG L  L  L L  N+  ++P  I    +L    + +N L+ALP E+ +
Sbjct: 171 RENQLTTLPKEIGQLKSLQTLYLRANQFATLPKEILQLQNLQALNLDSNELTALPKEMRQ 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  LDL  NQL     E  QL+ L  L L  N L+ LP EIGK+  L+KL L  N  
Sbjct: 231 LQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCENRF 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL   +        L+ L+S                              L L G  L+
Sbjct: 291 TTLPKDI------GQLQNLQS------------------------------LYLYGNQLT 314

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           A P EI +   +  L+LS N +  LP E+    +LQ+
Sbjct: 315 AFPKEIEQLQNLQILNLSYNRLTTLPEEIGQLQNLQI 351



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 170/365 (46%), Gaps = 40/365 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++R L  L  L++  N+L+ LP  IG+L  L++L +  N +  
Sbjct: 210 NLQALNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTI 269

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L K     N+   LP  +G+  NL       N +T+ P+++     +  L
Sbjct: 270 LPEEIGKLRNLQKLYLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQNLQIL 329

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT L    I     L  L  S N L  +P+ +G L  L  LDLH  +I + P  
Sbjct: 330 NLSYNRLTTLPEE-IGQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFPKE 388

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L +       L+ LP E+G++  L  L+L  NQL     E  +L+ L  L+L++
Sbjct: 389 ILQLQNLEKLNWSRTQLTTLPGEIGQMQNLKELNLEKNQLTALPKEIGRLQNLEELNLNS 448

Query: 285 NS--LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           NS   S LP EIG+++ L+ L L  N L                              A+
Sbjct: 449 NSNQFSSLPKEIGQLSNLKNLHLDHNML------------------------------AN 478

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
             KE  I   +RL      L+L   +L  +P EI +   + +LDLS N +  +P E+   
Sbjct: 479 LPKE--IGQLSRLET----LTLFRNSLETLPEEIGQLWNLRELDLSYNPLSSIPKEIGQL 532

Query: 403 ASLQV 407
            +L++
Sbjct: 533 KNLRI 537



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 119/243 (48%), Gaps = 26/243 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV------- 98
           +LQ L L++N +  L E++  L  L +LN+S+N+L++LP  +G+L  LK+LD+       
Sbjct: 325 NLQILNLSYNRLTTLPEEIGQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITT 384

Query: 99  ----------------SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
                           S   +  +P EIG    L + +   NQL  LP  +GR  NL + 
Sbjct: 385 FPKEILQLQNLEKLNWSRTQLTTLPGEIGQMQNLKELNLEKNQLTALPKEIGRLQNLEEL 444

Query: 143 K--ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
              +++N  +SLP+++   S +  L ++ N L  L    I   + L  L   +N L  +P
Sbjct: 445 NLNSNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKE-IGQLSRLETLTLFRNSLETLP 503

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           E IG L  L  LDL  N + SIP  I    +L   ++    L+ LP E+G+L  L  L L
Sbjct: 504 EEIGQLWNLRELDLSYNPLSSIPKEIGQLKNLRILHLRKTPLARLPDEIGELQDLEELIL 563

Query: 261 HSN 263
           + +
Sbjct: 564 NPD 566



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 37/169 (21%)

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           LS LP E+G+L  L TLDL  N+L     E  QL+ L +L L  N L+ L  EIG++  L
Sbjct: 60  LSTLPKEIGELQNLQTLDLFDNKLTVLPKEILQLQNLQMLGLCCNQLTILSEEIGQLQKL 119

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           R L L  N   TL   ++       L+ L++                             
Sbjct: 120 RALDLRANQFATLPKEILQ------LQNLQT----------------------------- 144

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            L+L+   L+A+P E+ +  ++ KLDL  N +  LP E+    SLQ  +
Sbjct: 145 -LNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLY 192


>gi|418709144|ref|ZP_13269938.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770480|gb|EKR45699.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456970649|gb|EMG11403.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 407

 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 183/378 (48%), Gaps = 24/378 (6%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 43  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 102

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 103 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 161

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 162 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 221

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 222 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 281

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L++L L  N        +       +L   ++RL        +T  E++  +     
Sbjct: 282 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRL--------TTLPEEIGQLQ---- 329

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF------- 409
              ++L L    L+ +P EI    ++  L L  N +  LP E+    +L+  +       
Sbjct: 330 -NLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNSLP 388

Query: 410 SDLVTNKESCISGCYLYW 427
           S+ +      +  C +Y+
Sbjct: 389 SEKIERIRKLLPQCIIYF 406



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 156/303 (51%), Gaps = 17/303 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+              +  +LQ L   +N +  L +++  L  L  L
Sbjct: 56  LDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 102

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N+L  LP  +
Sbjct: 103 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI 162

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIASWTMLTELIA 191
           GR  NL +   S N +T LPE++     + KL + G NK  T+L    I     L EL  
Sbjct: 163 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQLQNLQELHL 221

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L+ LP E+ +
Sbjct: 222 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 281

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L  N+ + +  E  Q + L VLDL  N L+ LP EIG++  L+KL L+ N L
Sbjct: 282 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQL 341

Query: 311 RTL 313
            TL
Sbjct: 342 TTL 344



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 149/323 (46%), Gaps = 40/323 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN  N  L  +P E+ K               +LQ+L L +N +  L E++  L  L VL
Sbjct: 79  LNSENNQLTTLPKEIGK-------------LQNLQELHLQNNQLTTLPEEIGQLQNLKVL 125

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N+L+ LP  IG+L  L+ L++  N +  +P EIG    L +   S N+L  LP  +
Sbjct: 126 HLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEI 185

Query: 134 GRCLNLSDFK--ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           G+  +L        N   T LP+++     + +L ++ N+LTVL    I     L  L  
Sbjct: 186 GQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKE-IGQLQNLRILDL 244

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N L  +P+ IG L  L+ LDL  N++  +P  I+   +L E  +  N   A P E+ +
Sbjct: 245 YQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQ 304

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL------------------------RLSVLDLSNNSL 287
              L  LDL+ N+L     E  QL                        +L  L L +N L
Sbjct: 305 FQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 364

Query: 288 SGLPPEIGKMTTLRKLLLTGNPL 310
           + LP EI ++  L+KL L  N L
Sbjct: 365 ATLPEEIKQLKNLKKLYLHNNSL 387



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 3/231 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVS-HNK-LSELPAAIGELHMLKSLDVSFNSI 103
           +LQ+L L+ N +  L E++  L  L  L++   NK  + LP  I +L  L+ L + FN +
Sbjct: 167 NLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRL 226

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             +P EIG    L   D   N+L  LP  +G+  NL     S N +T LP+++     + 
Sbjct: 227 TVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQ 286

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +L++E N+        I  +  L  L   +N L  +PE IG L  L +L L +N++ ++P
Sbjct: 287 ELNLEYNRFEAFPKE-ITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLP 345

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             I     L    + +N L+ LP E+ +L  L  L LH+N L    +E  +
Sbjct: 346 KEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNSLPSEKIERIR 396


>gi|45656981|ref|YP_001067.1| hypothetical protein LIC11097 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600218|gb|AAS69704.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|456983452|gb|EMG19761.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 413

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 183/378 (48%), Gaps = 24/378 (6%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 49  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 108

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 109 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 167

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 168 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 227

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 228 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 287

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L++L L  N        +       +L   ++RL        +T  E++  +     
Sbjct: 288 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRL--------TTLPEEIGQLQ---- 335

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF------- 409
              ++L L    L+ +P EI    ++  L L  N +  LP E+    +L+  +       
Sbjct: 336 -NLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLL 394

Query: 410 SDLVTNKESCISGCYLYW 427
           S+ +      +  C +Y+
Sbjct: 395 SEKIERIRKLLPQCIIYF 412



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 156/303 (51%), Gaps = 17/303 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+              +  +LQ L   +N +  L +++  L  L  L
Sbjct: 62  LDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 108

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N+L  LP  +
Sbjct: 109 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI 168

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIASWTMLTELIA 191
           GR  NL +   S N +T LPE++     + KL + G NK  T+L    I     L EL  
Sbjct: 169 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQLQNLQELHL 227

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L+ LP E+ +
Sbjct: 228 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 287

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L  N+ + +  E  Q + L VLDL  N L+ LP EIG++  L+KL L+ N L
Sbjct: 288 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQL 347

Query: 311 RTL 313
            TL
Sbjct: 348 TTL 350



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 40/323 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN  N  L  +P E+ K               +LQ+L L +N +  L E++  L  L VL
Sbjct: 85  LNSENNQLTTLPKEIGK-------------LQNLQELHLQNNQLTTLPEEIGQLQNLKVL 131

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N+L+ LP  IG+L  L+ L++  N +  +P EIG    L +   S N+L  LP  +
Sbjct: 132 HLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEI 191

Query: 134 GRCLNLSDFK--ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           G+  +L        N   T LP+++     + +L ++ N+LTVL    I     L  L  
Sbjct: 192 GQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKE-IGQLQNLRILDL 250

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N L  +P+ IG L  L+ LDL  N++  +P  I+   +L E  +  N   A P E+ +
Sbjct: 251 YQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQ 310

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT------------ 298
              L  LDL+ N+L     E  QL+ L  L LS N L+ LP EIG++             
Sbjct: 311 FQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 370

Query: 299 -----------TLRKLLLTGNPL 310
                       L+KL L  NPL
Sbjct: 371 ATLPEEIKQLKNLKKLYLHNNPL 393


>gi|421087062|ref|ZP_15547903.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104771|ref|ZP_15565364.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410365081|gb|EKP20476.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430171|gb|EKP74541.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 405

 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 183/378 (48%), Gaps = 24/378 (6%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 41  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 100

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 101 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 159

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 160 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 219

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 220 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 279

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L++L L  N        +       +L   ++RL        +T  E++  +     
Sbjct: 280 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRL--------TTLPEEIGQLQ---- 327

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF------- 409
              ++L L    L+ +P EI    ++  L L  N +  LP E+    +L+  +       
Sbjct: 328 -NLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLL 386

Query: 410 SDLVTNKESCISGCYLYW 427
           S+ +      +  C +Y+
Sbjct: 387 SEKIERIRKLLPQCIIYF 404



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 156/303 (51%), Gaps = 17/303 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+              +  +LQ L   +N +  L +++  L  L  L
Sbjct: 54  LDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 100

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N+L  LP  +
Sbjct: 101 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI 160

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIASWTMLTELIA 191
           GR  NL +   S N +T LPE++     + KL + G NK  T+L    I     L EL  
Sbjct: 161 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQLQNLQELHL 219

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L+ LP E+ +
Sbjct: 220 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 279

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L  N+ + +  E  Q + L VLDL  N L+ LP EIG++  L+KL L+ N L
Sbjct: 280 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQL 339

Query: 311 RTL 313
            TL
Sbjct: 340 TTL 342



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 40/323 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN  N  L  +P E+ K               +LQ+L L +N +  L E++  L  L VL
Sbjct: 77  LNSENNQLTTLPKEIGK-------------LQNLQELHLQNNQLTTLPEEIGQLQNLKVL 123

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N+L+ LP  IG+L  L+ L++  N +  +P EIG    L +   S N+L  LP  +
Sbjct: 124 HLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEI 183

Query: 134 GRCLNLSDFK--ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           G+  +L        N   T LP+++     + +L ++ N+LTVL    I     L  L  
Sbjct: 184 GQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKE-IGQLQNLRILDL 242

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N L  +P+ IG L  L+ LDL  N++  +P  I+   +L E  +  N   A P E+ +
Sbjct: 243 YQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQ 302

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT------------ 298
              L  LDL+ N+L     E  QL+ L  L LS N L+ LP EIG++             
Sbjct: 303 FQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 362

Query: 299 -----------TLRKLLLTGNPL 310
                       L+KL L  NPL
Sbjct: 363 ATLPEEIKQLKNLKKLYLHNNPL 385


>gi|47214759|emb|CAG01294.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 594

 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 195/407 (47%), Gaps = 56/407 (13%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           R+   ++ +    L +  LR++P  VY+                L  L L  N I  +++
Sbjct: 151 RLFGLSQKAADAGLRHNKLREIPAVVYR-------------LSTLTTLYLRFNRITAVEK 197

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+RNL  LT+L++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D  
Sbjct: 198 DIRNLSKLTMLSIRENKIKQLPAEIGELCSLVTLDVAHNQLEHLPKEIGNCTKITNLDLQ 257

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N+L +LP ++G   +++      N ++++P  LA C ++ +L++E N ++VL   L++S
Sbjct: 258 HNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSS 317

Query: 183 WTMLTELIASKNLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMG 238
              LT L  ++N     P  +G     S +  L++  N I  IP  I S    L++  M 
Sbjct: 318 LVKLTSLTLARNCFQSYP--VGGPSQFSTIYSLNMEHNCINKIPFGIFSRAKVLSKLNMK 375

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L++LP + G  + +  L+L +NQL +   + C L  L VL LSNN L  LP  IG +
Sbjct: 376 DNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVCGLVSLEVLILSNNLLKKLPHGIGNL 435

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             LR+L L  N L  L         P  + YL+                DL         
Sbjct: 436 RKLRELDLEENKLECL---------PNEIAYLK----------------DL--------- 461

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
             ++L L    L+ +P  I     +T L L  N +Q LP E+   A+
Sbjct: 462 --QKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGESAA 506



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 51/269 (18%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN ++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 348 LNMEHNCINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 407

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  + +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 408 DVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNE-IAYLKDLQKLVL 466

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC-----CS--------------- 231
           + N L  +P  IG L+ L  L L +N +  +P  I        CS               
Sbjct: 467 TNNQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGESAAEPRCSRRLSANPTPPRLSSG 526

Query: 232 ----LAEFYMGNNA-LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
               L E Y+ +N  L +LP EL   SKL                      S++ + N  
Sbjct: 527 TLENLEELYLNDNPNLHSLPFELALCSKL----------------------SIMSIENCP 564

Query: 287 LSGLPPEI--GKMTTLRKLLLTGNPLRTL 313
           LS LPP+I  G  + + + L    P R +
Sbjct: 565 LSHLPPQIVAGGPSFIIQFLKMQGPYRAM 593



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 152/328 (46%), Gaps = 31/328 (9%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  SI  +P  I   T L +    SN+L+ LP+ LG             C++SLP  
Sbjct: 105 LDLSKRSIHMLPTSIKGVTQLAELYLYSNKLQSLPAELG-------------CLSSLPAR 151

Query: 156 LADCS-KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           L   S K +   +  NKL  +   ++   + LT L    N +  + + I +LS+L  L +
Sbjct: 152 LFGLSQKAADAGLRHNKLREIP-AVVYRLSTLTTLYLRFNRITAVEKDIRNLSKLTMLSI 210

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
            +N+I  +P+ I   CSL    + +N L  LP E+G  +K+  LDL  N+L +       
Sbjct: 211 RENKIKQLPAEIGELCSLVTLDVAHNQLEHLPKEIGNCTKITNLDLQHNELLDLPETIGN 270

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKYL 329
           L  ++ L L  N LS +P  + K   L +L L  N +  L     SSLV   +  L +  
Sbjct: 271 LASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVKLTSLTLARNC 330

Query: 330 RSRLPENEDSEASTT-----KEDLIT-----MATRLSVTSKELSLEGMNLSAIPSEIWEA 379
               P    S+ ST      + + I      + +R  V SK L+++   L+++P +    
Sbjct: 331 FQSYPVGGPSQFSTIYSLNMEHNCINKIPFGIFSRAKVLSK-LNMKDNQLTSLPLDFGTW 389

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQV 407
             + +L+L+ N + ++P ++    SL+V
Sbjct: 390 TSMVELNLATNQLTKIPEDVCGLVSLEV 417



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 87/227 (38%), Gaps = 61/227 (26%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 362 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 408

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 409 VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTN 468

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED---------------------------- 155
           NQL  LP  +G   NL+      N +  LPE+                            
Sbjct: 469 NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGESAAEPRCSRRLSANPTPPRLSSGTL 528

Query: 156 --------------------LADCSKMSKLDVEGNKLTVLSNNLIAS 182
                               LA CSK+S + +E   L+ L   ++A 
Sbjct: 529 ENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAG 575


>gi|456971330|gb|EMG11963.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Grippotyphosa str. LT2186]
          Length = 349

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 137/257 (53%), Gaps = 2/257 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ LIL +N +  L +++  L  L VL +++N+L+ LP  I +L  L+ LD+  N +  
Sbjct: 93  NLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTT 152

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       +QL  LP  +G+  NL +   S+N +T LP+++     + + 
Sbjct: 153 LPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRF 212

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+LT+L    I     L EL    N L  +P+ IG L  L R  L  N+   +P  
Sbjct: 213 VLDNNQLTILPKE-IGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKE 271

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E Y+  N L+  P E+GKL KL TL+L +NQL     E  QL+ L  L+LS 
Sbjct: 272 IGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSE 331

Query: 285 NSLSGLPPEIGKMTTLR 301
           N L  +P EIG++  L+
Sbjct: 332 NQLKTIPQEIGQLQNLK 348



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 144/270 (53%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ LIL+   +  L ++++ L  L +L++ HN+L+ LP  IG+L  L+ L + +N + 
Sbjct: 46  LDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     ++NQL  LP+ + +  NL      NN +T+LP+++     +  
Sbjct: 106 ALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQL 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  ++LT+L    I     L EL  S N L  +P+ IG L  L R  L  N++  +P 
Sbjct: 166 LSLYESQLTILPQE-IGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+G+N L+ LP E+G+L  L    L +NQ      E  QL+ L  L LS
Sbjct: 225 EIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLS 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            N L+  P EIGK+  L+ L L  N L TL
Sbjct: 285 YNQLTTFPKEIGKLQKLQTLNLWNNQLTTL 314



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 152/335 (45%), Gaps = 38/335 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL +S  KL+ LP  I +L  LK LD+  N +  +P EIG    L       NQL  LP 
Sbjct: 50  VLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     +NN +T+LP ++     +  LD+  N+LT L    I     L  L  
Sbjct: 110 EIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKE-IGKLENLQLLSL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            ++ L  +P+ IG L  L  LDL  N++  +P  I    +L  F + NN L+ LP E+GK
Sbjct: 169 YESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L  NQL     E  QL+ L    L NN  + LP EIG++  L++L L+ N L
Sbjct: 229 LQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            T    +        L+ L++                              L+L    L+
Sbjct: 289 TTFPKEI------GKLQKLQT------------------------------LNLWNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            +P EI +   +  L+LS N ++ +P E+    +L
Sbjct: 313 TLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNL 347



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 86/196 (43%), Gaps = 37/196 (18%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L L + ++ ++P  I    +L    +G+N L+ALP E+G+L  L  L L+ NQL     E
Sbjct: 51  LILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKE 110

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L VL L+NN L+ LP EI ++  L+ L L  N L TL   +       LL    
Sbjct: 111 IGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYE 170

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           S+L                                    + +P EI +   + +LDLS N
Sbjct: 171 SQL------------------------------------TILPQEIGKLQNLHELDLSHN 194

Query: 391 SIQELPPELSSCASLQ 406
            +  LP E+    +LQ
Sbjct: 195 QLTILPKEIGQLQNLQ 210



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 37/138 (26%)

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E  QL+ L +LDL +N L+ LP EIG++  L+ L+L  N L  L         P  +  L
Sbjct: 64  EIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTAL---------PKEIGQL 114

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           ++                            K L L    L+ +P+EI +   +  LDL  
Sbjct: 115 KNL---------------------------KVLFLNNNQLTTLPTEIRQLKNLQMLDLGN 147

Query: 390 NSIQELPPELSSCASLQV 407
           N +  LP E+    +LQ+
Sbjct: 148 NQLTTLPKEIGKLENLQL 165


>gi|410451731|ref|ZP_11305733.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014497|gb|EKO76627.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 394

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/265 (35%), Positives = 140/265 (52%), Gaps = 2/265 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQKL L  N I  L  ++  L  L  LN+S N+L+ +P  I EL  L++L + +N +  +
Sbjct: 85  LQKLDLGFNKITVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTL 144

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L +     NQL  +P  +G   NL +    +N +T+LP+++     + KL 
Sbjct: 145 PKEIGKLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLI 204

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+LT L    I     L  L  + N    +P+ IG+L  L  L L +N++ ++P  I
Sbjct: 205 LDKNQLTTLPQE-IGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEI 263

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
                L E  + +N L+ LP E+G L  L  L+L SNQL     E   L+ L  L+LS+N
Sbjct: 264 GNLQKLQELRLDHNQLTTLPKEIGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSN 323

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPL 310
            L+ LP EI  + +L  L L+GNPL
Sbjct: 324 QLTALPKEIENLQSLESLDLSGNPL 348



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 166/349 (47%), Gaps = 38/349 (10%)

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
           KL E L+N   + VL ++  KL  LP  IG L  L+ L++  N +  IP EIG+   L K
Sbjct: 28  KLNEALQNPTQVRVLYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQK 87

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D   N++  LP+ +G+  +L +   S N +T++P+++ +   +  L +  N+LT L   
Sbjct: 88  LDLGFNKITVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTL--- 144

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                                P+ IG L  L  L L +N++ +IP  I    +L E Y+ 
Sbjct: 145 ---------------------PKEIGKLQNLQELHLWENQLTTIPQEIGNLQNLKELYLM 183

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
           +N L+ LP E+G+L  L  L L  NQL     E  +L+ L  L L+ N  + LP EIG +
Sbjct: 184 HNNLTTLPKEVGQLQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTGNQFTTLPKEIGNL 243

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L LT N L TL   + N     L K    RL  N+ +       +L  +      
Sbjct: 244 QNLQGLALTRNQLTTLPKEIGN-----LQKLQELRLDHNQLTTLPKEIGNLQNL------ 292

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             K+L+L    L+ IP EI     +  L+LS N +  LP E+ +  SL+
Sbjct: 293 --KDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTALPKEIENLQSLE 339



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 157/348 (45%), Gaps = 38/348 (10%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L +++ NL  L  LN+  N+L+ +P  IG L  L+ LD+ FN I  +P+EIG   +L + 
Sbjct: 52  LPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKITVLPNEIGKLQSLQEL 111

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           + S NQL  +P  +    +L       N +T+LP+++     + +L +  N+LT +    
Sbjct: 112 NLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKEIGKLQNLQELHLWENQLTTIPQE- 170

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I +   L EL    N L  +P+ +G L  L +L L +N++ ++P  I    +L    +  
Sbjct: 171 IGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTG 230

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N  + LP E+G L  L  L L  NQL     E   L +L  L L +N L+ LP EIG + 
Sbjct: 231 NQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQKLQELRLDHNQLTTLPKEIGNLQ 290

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L+ L L  N L T+   + N      L+Y                              
Sbjct: 291 NLKDLNLRSNQLTTIPQEIGNLQN---LEY------------------------------ 317

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              L+L    L+A+P EI     +  LDLS N +   P E+     L+
Sbjct: 318 ---LNLSSNQLTALPKEIENLQSLESLDLSGNPLTSFPEEIGKLQHLK 362



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 112/217 (51%), Gaps = 1/217 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  + +++ NL  L  L + HN L+ LP  +G+L  L+ L +  N +  
Sbjct: 153 NLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLTT 212

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L     + NQ   LP  +G   NL     + N +T+LP+++ +  K+ +L
Sbjct: 213 LPQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQKLQEL 272

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+LT L    I +   L +L    N L  +P+ IG+L  L  L+L  N++ ++P  
Sbjct: 273 RLDHNQLTTLPKE-IGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTALPKE 331

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           I    SL    +  N L++ P E+GKL  L  L L +
Sbjct: 332 IENLQSLESLDLSGNPLTSFPEEIGKLQHLKRLRLEN 368



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 5/119 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L L HN +  L +++ NL  L  LN+  N+L+ +P  IG L  L+ L++S N +  +
Sbjct: 269 LQELRLDHNQLTTLPKEIGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTAL 328

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P EI +  +L   D S N L   P  +G+  +L   +  N     +P  L    K+ KL
Sbjct: 329 PKEIENLQSLESLDLSGNPLTSFPEEIGKLQHLKRLRLEN-----IPTLLPQKEKIRKL 382


>gi|390335916|ref|XP_794429.3| PREDICTED: uncharacterized protein LOC589701 [Strongylocentrotus
           purpuratus]
          Length = 1864

 Score =  140 bits (353), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 104/337 (30%), Positives = 165/337 (48%), Gaps = 62/337 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+  + +LR VP E+ + +DE            L++L+L  N+I +L  DL +  L
Sbjct: 13  TVKTLDFRHCNLRFVPEEIVE-YDET-----------LEELLLDSNDIRELPRDLFHCEL 60

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI------------------- 110
           L  L VS N+L  +P A+  L  L+ LD+S N I+++PD I                   
Sbjct: 61  LKKLGVSDNELVTIPTAVASLIHLEELDISKNGIVELPDNIKGCKSLRLVEVSVNPLGKL 120

Query: 111 -----GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
                G+ T LV FD S N+L+ LP+ + +  +L+D   S N +  LPE++   S ++ L
Sbjct: 121 SDKSFGNLTCLVYFDASCNRLEYLPAEMDQLESLTDLHLSKNFLHQLPENIGQLSSLTTL 180

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
             + N+L  L ++ I     L ELI S N L  +P +IG L RL  L++ +N + S+P+ 
Sbjct: 181 KADNNQLASLPSS-IGGLVSLEELILSANDLEELPPSIGLLRRLRHLNVDENMLQSVPAE 239

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           +  C  +    +  N L  LP E+G+++K                      L+V++LSNN
Sbjct: 240 LGSCSGITLLSLRGNYLQVLPDEIGRIAK----------------------LTVVNLSNN 277

Query: 286 SLSGLPPEIGKMTTLRKLLLTGN---PLRTLRSSLVN 319
            L  LP    K+  L+ L L+ N   PL  L+S  V+
Sbjct: 278 RLQSLPYSFTKLKNLQALWLSENQSKPLIPLQSEFVD 314



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 84/315 (26%), Positives = 143/315 (45%), Gaps = 36/315 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +K+LD    ++  +P+EI      L +    SN ++ELP  L  C  L     S+N + +
Sbjct: 14  VKTLDFRHCNLRFVPEEIVEYDETLEELLLDSNDIRELPRDLFHCELLKKLGVSDNELVT 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           +P  +A    + +LD+  N +  L +N+    ++    ++   L     ++ G+L+ L+ 
Sbjct: 74  IPTAVASLIHLEELDISKNGIVELPDNIKGCKSLRLVEVSVNPLGKLSDKSFGNLTCLVY 133

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D   NR+  +P+ +    SL + ++  N L  LP  +G+LS L TL             
Sbjct: 134 FDASCNRLEYLPAEMDQLESLTDLHLSKNFLHQLPENIGQLSSLTTLKA----------- 182

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                       NN L+ LP  IG + +L +L+L+ N L  L       P+  LL+ LR 
Sbjct: 183 -----------DNNQLASLPSSIGGLVSLEELILSANDLEELP------PSIGLLRRLR- 224

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            L  +E+   S   E    + +   +T   LSL G  L  +P EI    ++T ++LS N 
Sbjct: 225 HLNVDENMLQSVPAE----LGSCSGITL--LSLRGNYLQVLPDEIGRIAKLTVVNLSNNR 278

Query: 392 IQELPPELSSCASLQ 406
           +Q LP   +   +LQ
Sbjct: 279 LQSLPYSFTKLKNLQ 293


>gi|195349129|ref|XP_002041099.1| GM15368 [Drosophila sechellia]
 gi|261277895|sp|B4IBI9.1|SUR8_DROSE RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194122704|gb|EDW44747.1| GM15368 [Drosophila sechellia]
          Length = 683

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 186/396 (46%), Gaps = 52/396 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 237 LDLRHNKLAEIPSVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 283

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 284 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 343

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 344 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 403

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P       + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G 
Sbjct: 404 NQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGT 463

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N +
Sbjct: 464 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRI 523

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +       LL  L                              + L L+   ++
Sbjct: 524 EVLPHEI------GLLHEL------------------------------QRLILQTNQIT 547

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P  I   G +T L +S N++Q LP E+ S  SL+
Sbjct: 548 MLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 583



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 172/364 (47%), Gaps = 39/364 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           +++L L+ ++I  +   ++    LT L +  NK+ +LP  IG L  L++L ++ NS+  +
Sbjct: 165 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 224

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ + + + L   D   N+L E+PS + R  +L+      N IT++ +DL     ++ L 
Sbjct: 225 PESLQNCSQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLS 284

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK+  L +  I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI
Sbjct: 285 LRENKIRELGS-AIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 343

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSN 284
               SL    M  N LS++PA L     +   ++  N + +    + A    L+ + LS 
Sbjct: 344 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 403

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEAST 343
           N  +  P              TG P +      +N      L++ R  ++P    S A  
Sbjct: 404 NQFASYP--------------TGGPAQFTNVYSIN------LEHNRIDKIPYGIFSRAKG 443

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                    T+L++       E M L+A+P +I     + +L+L+ N++Q+LP ++ +  
Sbjct: 444 --------LTKLNMK------ENM-LTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQ 488

Query: 404 SLQV 407
           +L++
Sbjct: 489 NLEI 492


>gi|320169123|gb|EFW46022.1| leucine-rich repeat-containing protein 28 [Capsaspora owczarzaki
           ATCC 30864]
          Length = 1067

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 36/310 (11%)

Query: 38  GDKW---WEAV-------DLQKLILAHNNIEKLK-EDLRNLPLLTVLNVSHNKLSELPAA 86
            D W   W+ V        +Q L ++HN +  L  E L  L  L  L +SHN+L+ +PA 
Sbjct: 13  ADLWCALWDFVADIVKLKHIQYLYVSHNLLTTLPSEGLGRLHALVHLKLSHNELTSVPAT 72

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG+L  L  LD+S+N++ ++PD IG    L +FD   NQL ELP S+   ++L   +A +
Sbjct: 73  IGQLTELTLLDLSYNNLTELPDSIGRLRKLKRFDVKRNQLTELPDSMSGMVSLYRLRAVD 132

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N + + P  L     + KLD+  NK+T L    I +   L +L   KNLL  +P+ I  L
Sbjct: 133 NQLKAFPIALCQLPALEKLDLSNNKITELP-AAIGNMPRLVKLTLDKNLLTSLPDAICLL 191

Query: 207 SRLIRLDLHQNRILSIPSSISG----------CCSLAEFY-------------MGNNALS 243
             L +L + +NRIL +P ++S             SL  F              +  N L+
Sbjct: 192 VNLRQLTISRNRILDLPHNVSQLHHMISVPWYASSLVSFPPHLLELRNVRQLDLSRNNLT 251

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
           ++P E+ +L  L  L+L SNQ++E  +  C LR L+ LDL  N ++  P E   +  L  
Sbjct: 252 SIPPEILELKYLEKLNLRSNQIREIPLHLCMLRKLTSLDLGKNMITTFPYEFLALRHLDD 311

Query: 303 LLLTGNPLRT 312
           L + GNPL+T
Sbjct: 312 LKIVGNPLKT 321



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 115/248 (46%), Gaps = 18/248 (7%)

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           D+     +  L V  N LT L +  +     L  L  S N L  +P TIG L+ L  LDL
Sbjct: 25  DIVKLKHIQYLYVSHNLLTTLPSEGLGRLHALVHLKLSHNELTSVPATIGQLTELTLLDL 84

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             N +  +P SI     L  F +  N L+ LP  +  +  L  L    NQLK + +  CQ
Sbjct: 85  SYNNLTELPDSIGRLRKLKRFDVKRNQLTELPDSMSGMVSLYRLRAVDNQLKAFPIALCQ 144

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L  L  LDLSNN ++ LP  IG M  L KL L  N L +L  ++       LL  LR   
Sbjct: 145 LPALEKLDLSNNKITELPAAIGNMPRLVKLTLDKNLLTSLPDAIC------LLVNLR--- 195

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLE--GMNLSAIPSEIWEAGEITKLDLSRNS 391
                 + + ++  ++ +   +S     +S+     +L + P  + E   + +LDLSRN+
Sbjct: 196 ------QLTISRNRILDLPHNVSQLHHMISVPWYASSLVSFPPHLLELRNVRQLDLSRNN 249

Query: 392 IQELPPEL 399
           +  +PPE+
Sbjct: 250 LTSIPPEI 257



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 116/273 (42%), Gaps = 35/273 (12%)

Query: 14  LNLSNRSLRDVPNEV-----YKNFDEAGE-----GDKWWEAVDLQKLILAHNNIEKLKED 63
           L+LS  +L ++P+ +      K FD          D     V L +L    N ++     
Sbjct: 82  LDLSYNNLTELPDSIGRLRKLKRFDVKRNQLTELPDSMSGMVSLYRLRAVDNQLKAFPIA 141

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           L  LP L  L++S+NK++ELPAAIG +  L  L +  N +  +PD I     L +   S 
Sbjct: 142 LCQLPALEKLDLSNNKITELPAAIGNMPRLVKLTLDKNLLTSLPDAICLLVNLRQLTISR 201

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N++ +LP ++ +  ++       + + S P  L +   + +LD+                
Sbjct: 202 NRILDLPHNVSQLHHMISVPWYASSLVSFPPHLLELRNVRQLDL---------------- 245

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                   S+N L  +P  I  L  L +L+L  N+I  IP  +     L    +G N ++
Sbjct: 246 --------SRNNLTSIPPEILELKYLEKLNLRSNQIREIPLHLCMLRKLTSLDLGKNMIT 297

Query: 244 ALPAELGKLSKLGTLDLHSNQLK-EYCVEACQL 275
             P E   L  L  L +  N LK ++   A ++
Sbjct: 298 TFPYEFLALRHLDDLKIVGNPLKTKFTARAVRI 330


>gi|307211084|gb|EFN87327.1| Leucine-rich repeat protein SHOC-2 [Harpegnathos saltator]
          Length = 506

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 190/396 (47%), Gaps = 30/396 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ VYK                L  L L  N I+ + +++RNL  L  L
Sbjct: 99  LDLRHNKLNEIPDVVYK-------------LKSLVTLFLRFNRIKYVSDNIRNLTNLATL 145

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELP+ IG+   L + DVS N +  +P+EIG    L   D   N L ++P S+
Sbjct: 146 SLRENKIKELPSGIGDFLNLHTFDVSHNHLDHLPEEIGKCVQLSTLDLQHNDLLDIPDSI 205

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  + L       N +TS+PE L++C  M +  VEGN ++ + + L++S + LT +  S+
Sbjct: 206 GNLVLLMRLGLRYNALTSIPESLSNCKLMDEFSVEGNHVSQVPDGLLSSLSNLTTITLSR 265

Query: 194 NLLNGMPETIGS-LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P    S  + +  + + QN+I  IP  I S    L +  M +N L+ALP ++G 
Sbjct: 266 NNFTSYPSGGPSQFTNIYSISMEQNQIDKIPYGIFSRAKKLTKLNMRDNQLTALPLDIGT 325

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +NQL +   +   L+ L VL LSNN L  L   I  +  LR L L  N L
Sbjct: 326 WVNMVELNLGTNQLTKIPDDIQFLQNLEVLILSNNLLKRLSASIANLRKLRVLDLEENRL 385

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +L         P  + +LR        S   T+    I   T L+V     S+   NL+
Sbjct: 386 ESL---------PNEIGFLRELQQLVLQSNQLTSLPRAIGHLTNLTV----FSVGENNLN 432

Query: 371 AIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASL 405
            +P EI     +  L ++ N+ +  LP EL+ C  L
Sbjct: 433 YLPEEIGTLENLETLHINDNANLHNLPFELALCPKL 468



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 179/395 (45%), Gaps = 76/395 (19%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N++  L   L NL  L VL++ HNKL+E+P  + +L  L +L + FN I  
Sbjct: 72  NLETLALNENSLTSLPNTLENLKRLRVLDLRHNKLNEIPDVVYKLKSLVTLFLRFNRIKY 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           + D I + T L       N++KELPS +G  LNL  F  S+N +  LPE++  C ++S L
Sbjct: 132 VSDNIRNLTNLATLSLRENKIKELPSGIGDFLNLHTFDVSHNHLDHLPEEIGKCVQLSTL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D++ N L                          +P++IG+L  L+RL L  N + SIP S
Sbjct: 192 DLQHNDLL------------------------DIPDSIGNLVLLMRLGLRYNALTSIPES 227

Query: 226 ISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY--------------CV 270
           +S C  + EF +  N +S +P   L  LS L T+ L  N    Y               +
Sbjct: 228 LSNCKLMDEFSVEGNHVSQVPDGLLSSLSNLTTITLSRNNFTSYPSGGPSQFTNIYSISM 287

Query: 271 EACQL------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           E  Q+            +L+ L++ +N L+ LP +IG    + +L L  N L  +     
Sbjct: 288 EQNQIDKIPYGIFSRAKKLTKLNMRDNQLTALPLDIGTWVNMVELNLGTNQLTKI----- 342

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS------KELSLEGMNLSAI 372
               P  +++L       ++ E      +L+    RLS +       + L LE   L ++
Sbjct: 343 ----PDDIQFL-------QNLEVLILSNNLL---KRLSASIANLRKLRVLDLEENRLESL 388

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           P+EI    E+ +L L  N +  LP  +    +L V
Sbjct: 389 PNEIGFLRELQQLVLQSNQLTSLPRAIGHLTNLTV 423



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 152/332 (45%), Gaps = 23/332 (6%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           K LD+S  SI  +P  +   T L +F    N+L  LPS +G   NL     + N +TSLP
Sbjct: 28  KLLDLSKASITHLPSTVRDLTHLKEFYLYGNKLVSLPSQIGCLTNLETLALNENSLTSLP 87

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
             L +  ++  LD+  NKL  +  +++     L  L    N +  + + I +L+ L  L 
Sbjct: 88  NTLENLKRLRVLDLRHNKLNEIP-DVVYKLKSLVTLFLRFNRIKYVSDNIRNLTNLATLS 146

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L +N+I  +PS I    +L  F + +N L  LP E+GK  +L TLDL  N L +      
Sbjct: 147 LRENKIKELPSGIGDFLNLHTFDVSHNHLDHLPEEIGKCVQLSTLDLQHNDLLDIPDSIG 206

Query: 274 QLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT----LRSSLVNGPTPALLKY 328
            L L + L L  N+L+ +P  +     + +  + GN +      L SSL N  T  L + 
Sbjct: 207 NLVLLMRLGLRYNALTSIPESLSNCKLMDEFSVEGNHVSQVPDGLLSSLSNLTTITLSRN 266

Query: 329 LRSRLPEN-------------EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
             +  P               E ++       + + A +L+    +L++    L+A+P +
Sbjct: 267 NFTSYPSGGPSQFTNIYSISMEQNQIDKIPYGIFSRAKKLT----KLNMRDNQLTALPLD 322

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I     + +L+L  N + ++P ++    +L+V
Sbjct: 323 IGTWVNMVELNLGTNQLTKIPDDIQFLQNLEV 354



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 11/189 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILA 53
           I   A+    LN+ +  L  +P ++  + N  E   G      +        +L+ LIL+
Sbjct: 299 IFSRAKKLTKLNMRDNQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQFLQNLEVLILS 358

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N +++L   + NL  L VL++  N+L  LP  IG L  L+ L +  N +  +P  IG  
Sbjct: 359 NNLLKRLSASIANLRKLRVLDLEENRLESLPNEIGFLRELQQLVLQSNQLTSLPRAIGHL 418

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC-ITSLPEDLADCSKMSKLDVEGNKL 172
           T L  F    N L  LP  +G   NL     ++N  + +LP +LA C K+  + ++   L
Sbjct: 419 TNLTVFSVGENNLNYLPEEIGTLENLETLHINDNANLHNLPFELALCPKLIFMSIDNCPL 478

Query: 173 TVLSNNLIA 181
           +++   ++A
Sbjct: 479 SLMPPEIVA 487


>gi|418717491|ref|ZP_13277153.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787088|gb|EKR80823.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 426

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/309 (34%), Positives = 157/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N++ ++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+G+L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NFLPKEIGQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 398 KLYLHNNPL 406



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 161/356 (45%), Gaps = 48/356 (13%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L T        
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTT-------- 316

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                       LPEN            I    RL      L L    L+ +P EI +  
Sbjct: 317 ------------LPEN------------IGQLQRLQT----LYLGNNQLNFLPKEIGQLQ 348

Query: 381 EITKLDLSRNSIQELPPELSSCASLQ---VKFSDLVTNKESC-----ISGCYLYWN 428
            +  LDL  N +  LP E+     LQ   +K++ L T  E       +   YL+ N
Sbjct: 349 NLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 129/282 (45%), Gaps = 53/282 (18%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L HN    + +++  L  L  L + HN+L+ LP  IG+L  L+SL +  N +  +
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLG-----------------------RCLNLSDFK 143
           P EIG    L      +NQL  LP  +G                       +  NL   K
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLK 285

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
              N +T+LP+++     + +LD++GN+LT L                        PE I
Sbjct: 286 LYENQLTTLPKEIGQLQNLQELDLDGNQLTTL------------------------PENI 321

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L RL  L L  N++  +P  I    +L    + +N L+ALP E+GKL KL TL+L  N
Sbjct: 322 GQLQRLQTLYLGNNQLNFLPKEIGQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYN 381

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           QL     E  QL+ L  L L NN    LP E  K+  +RKLL
Sbjct: 382 QLATLPEEIKQLKNLKKLYLHNNP---LPSE--KIERIRKLL 418


>gi|195570161|ref|XP_002103077.1| GD20236 [Drosophila simulans]
 gi|194199004|gb|EDX12580.1| GD20236 [Drosophila simulans]
          Length = 724

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 185/396 (46%), Gaps = 52/396 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 278 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 324

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 325 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 384

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 385 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 444

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P       + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G 
Sbjct: 445 NQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGT 504

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N +
Sbjct: 505 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRI 564

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +       LL  L                              + L L+   ++
Sbjct: 565 EVLPHEI------GLLHEL------------------------------QRLILQTNQIT 588

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P  I   G +T L +S N++Q LP E+ S  SL+
Sbjct: 589 MLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 624



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 173/371 (46%), Gaps = 39/371 (10%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K  +   +++L L+ ++I  +   ++    LT L +  NK+ +LP  IG L  L++L ++
Sbjct: 199 KALQRCRIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALN 258

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            NS+  +P+ + + + L   D   N+L E+P  + R  +L+      N IT++ +DL   
Sbjct: 259 ENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQL 318

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
             ++ L +  NK+  L +  I +   LT L  S N L  +PE IG+   L  LDL  N +
Sbjct: 319 VNLTMLSLRENKIRELGS-AIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNEL 377

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRL 277
           L IP SI    SL    M  N LS++PA L     +   ++  N + +    + A    L
Sbjct: 378 LDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGL 437

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPEN 336
           + + LS N  +  P              TG P +      +N      L++ R  ++P  
Sbjct: 438 TTITLSRNQFASYP--------------TGGPAQFTNVYSIN------LEHNRIDKIPYG 477

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
             S A           T+L++       E M L+A+P +I     + +L+L+ N++Q+LP
Sbjct: 478 IFSRAKGL--------TKLNMK------ENM-LTALPLDIGTWVNMVELNLATNALQKLP 522

Query: 397 PELSSCASLQV 407
            ++ +  +L++
Sbjct: 523 DDIMNLQNLEI 533


>gi|357618946|gb|EHJ71730.1| putative mitotic protein phosphatase 1 regulator [Danaus plexippus]
          Length = 601

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 218/453 (48%), Gaps = 49/453 (10%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEG-----------DKWWEAVDLQKLIL 52
           ++K+A+ +G L+L NR L  VP  V+K  D   +            D WW A  L+ L L
Sbjct: 35  LIKSAKRTGQLSLCNRGLGTVPENVWKVNDLVMDDTKDVDFSRSPRDNWWNAEPLKMLDL 94

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           + N I+ +  +++ L  L  L +  N +  +P  IGEL+ L +L +  N +  +P E   
Sbjct: 95  SSNVIKIISPNIKLLSELITLKLHDNAIESIPPEIGELNNLSNLSLDHNRLECLPKEFYK 154

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            T +     S N +K +    G  + L+    S+N +TSLP  +    ++  L++  N+L
Sbjct: 155 LTEMRWLSISYNSIKNIEPDFGDLVMLTFLDLSHNKLTSLPPGMGYLVRLVDLNLSYNEL 214

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           T L  + I +   L +   S N L  +P  +G L ++  LD + N I  +P    GC +L
Sbjct: 215 TELPPD-IVNLRDLKKFNVSNNDLKKLP-ALGELRKMETLDANHNAIEELPD-FYGCVAL 271

Query: 233 AEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSG 289
            E Y+ NN +  +  E   ++  L  L++  N+L E   E   L   L   DLSNN+L+ 
Sbjct: 272 KEIYIANNFIKEITEEFCDQMQHLNVLNIRDNKL-EVLPENISLLQNLKRFDLSNNNLNK 330

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--------NEDS-- 339
           LP  +G ++ L+ + + GN L  +R  ++ G T  ++KYLR R+ E        NE++  
Sbjct: 331 LPKNLGLLSQLQSISMEGNKLSFVRQDVIRGGTDRMMKYLRDRMAEEVVGEARLNENNWP 390

Query: 340 ----------------EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE-I 382
                           E ++  ED+   A +  V   +LS     L+ +P+      + +
Sbjct: 391 DKYTLKKSQALIVPAKELASVPEDVFVAAAQAEVHVIDLSRN--KLTGLPAGFHLVRDTL 448

Query: 383 TKLDLSRNSIQELPPELSSCASLQVKFSDLVTN 415
           T+L LS NSI+ +PPE+S+C  LQ  + DL  N
Sbjct: 449 TQLLLSSNSIEVVPPEISACKHLQ--YIDLGKN 479



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 175/376 (46%), Gaps = 50/376 (13%)

Query: 9   RTSGSLNLSNRSLRDVP--NEVYK------NFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           R     N+SN  L+ +P   E+ K      N +   E   ++  V L+++ +A+N I+++
Sbjct: 225 RDLKKFNVSNNDLKKLPALGELRKMETLDANHNAIEELPDFYGCVALKEIYIANNFIKEI 284

Query: 61  KEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
            E+    +  L VLN+  NKL  LP  I  L  LK  D+S N++ K+P  +G  + L   
Sbjct: 285 TEEFCDQMQHLNVLNIRDNKLEVLPENISLLQNLKRFDLSNNNLNKLPKNLGLLSQLQSI 344

Query: 120 DCSSNQLKELPSSLGRC----------------------LNLSDF------KASNNCIT- 150
               N+L  +   + R                       LN +++      K S   I  
Sbjct: 345 SMEGNKLSFVRQDVIRGGTDRMMKYLRDRMAEEVVGEARLNENNWPDKYTLKKSQALIVP 404

Query: 151 -----SLPEDL---ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
                S+PED+   A  +++  +D+  NKLT L          LT+L+ S N +  +P  
Sbjct: 405 AKELASVPEDVFVAAAQAEVHVIDLSRNKLTGLPAGFHLVRDTLTQLLLSSNSIEVVPPE 464

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           I +   L  +DL +N +  +P  +S   +L E  + NN  + +P  +  L  L  L    
Sbjct: 465 ISACKHLQYIDLGKNCLTDLPMEMSDLKNLRELVISNNRFTKIPRCVYDLENLEILLAAE 524

Query: 263 NQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           NQ+ E  V +  L    +L+VLDL+NNS+  +PPE+G  T LR L L GN  R  R +++
Sbjct: 525 NQITEINVSSDALAKLKKLAVLDLTNNSIITVPPELGNFTHLRSLELMGNCFRQPRHAVL 584

Query: 319 NGPTPALLKYLRSRLP 334
              T ++L YLR R+P
Sbjct: 585 TKGTASILSYLRDRIP 600



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 189/426 (44%), Gaps = 68/426 (15%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           ++++  +++ L +++N+I+ ++ D  +L +LT L++SHNKL+ LP  +G L  L  L++S
Sbjct: 151 EFYKLTEMRWLSISYNSIKNIEPDFGDLVMLTFLDLSHNKLTSLPPGMGYLVRLVDLNLS 210

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           +N + ++P +I +   L KF+ S+N LK+LP+ LG    +    A++N I  LP D   C
Sbjct: 211 YNELTELPPDIVNLRDLKKFNVSNNDLKKLPA-LGELRKMETLDANHNAIEELP-DFYGC 268

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI---------------- 203
             + ++ +  N +  ++         L  L    N L  +PE I                
Sbjct: 269 VALKEIYIANNFIKEITEEFCDQMQHLNVLNIRDNKLEVLPENISLLQNLKRFDLSNNNL 328

Query: 204 -------GSLSRLIRLDLHQNRILSIPSS-ISGCCSLAEFYMGNNALSALPAELG----- 250
                  G LS+L  + +  N++  +    I G       Y+ +     +  E       
Sbjct: 329 NKLPKNLGLLSQLQSISMEGNKLSFVRQDVIRGGTDRMMKYLRDRMAEEVVGEARLNENN 388

Query: 251 -----KLSKLGTLDLHSNQL----KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMT-TL 300
                 L K   L + + +L    ++  V A Q  + V+DLS N L+GLP     +  TL
Sbjct: 389 WPDKYTLKKSQALIVPAKELASVPEDVFVAAAQAEVHVIDLSRNKLTGLPAGFHLVRDTL 448

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLR---------SRLPENEDSEASTTKEDLITM 351
            +LLL+ N +  +       P  +  K+L+         + LP  E S+    +E +I+ 
Sbjct: 449 TQLLLSSNSIEVV------PPEISACKHLQYIDLGKNCLTDLPM-EMSDLKNLRELVISN 501

Query: 352 ATRLSVTSKELSLEGMN-LSAIPSEIWEAG----------EITKLDLSRNSIQELPPELS 400
                +      LE +  L A  ++I E            ++  LDL+ NSI  +PPEL 
Sbjct: 502 NRFTKIPRCVYDLENLEILLAAENQITEINVSSDALAKLKKLAVLDLTNNSIITVPPELG 561

Query: 401 SCASLQ 406
           +   L+
Sbjct: 562 NFTHLR 567


>gi|365922508|ref|ZP_09446706.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364573058|gb|EHM50578.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 429

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 168/318 (52%), Gaps = 12/318 (3%)

Query: 12  GSLNLSNRSLRDVPNEV-----YKNFDEAG-EGDKWWEAVD----LQKLILAHNNIEKLK 61
           G L+LS R L+ +P+ +         D  G E +   E++     L++L L  N +E L 
Sbjct: 54  GRLDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLKRLDLKWNRLEALP 113

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
             L+NL  L+ L   +N+L+ LP  +     +  LD+  N + ++P  + + T L K + 
Sbjct: 114 NSLKNLTRLSKLEFGYNQLTRLPETLAGFTQITELDIGDNRLTRVPHYLSNFTNLTKLNL 173

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           + NQL+ELP+ LG+  +L+    S N +  LP+ + + + +++L++ GN+L  L ++L +
Sbjct: 174 ARNQLEELPAFLGKLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGNQLGTLPDSL-S 232

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L  L    NLL  +PE+IG+L  L  LD H NR+ S+P SI     L+   + +N 
Sbjct: 233 NLHQLYHLDIGGNLLTTLPESIGALENLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNK 292

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 300
           L+ LP +   L +L TLDL  N L       C   RL+ L L++N L+ LP  IG +  L
Sbjct: 293 LTRLPEQTSHLLRLSTLDLSYNNLMTLPDFVCNFSRLTNLHLAHNELTMLPMHIGYLGEL 352

Query: 301 RKLLLTGNPLRTLRSSLV 318
             L ++ N L +L  S+ 
Sbjct: 353 EILDVSNNDLGSLPDSVA 370



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 176/364 (48%), Gaps = 38/364 (10%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L +L L+   ++ L +++ +L  LT L++  N+L  LP +IG L +LK LD+ +N 
Sbjct: 49  ELAGLGRLDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLKRLDLKWNR 108

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P+ + + T L K +   NQL  LP +L     +++    +N +T +P  L++ + +
Sbjct: 109 LEALPNSLKNLTRLSKLEFGYNQLTRLPETLAGFTQITELDIGDNRLTRVPHYLSNFTNL 168

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           +KL++  N+L  L    +   T LT L  S N L  +P+ IG L+ L  L+L+ N++ ++
Sbjct: 169 TKLNLARNQLEELP-AFLGKLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGNQLGTL 227

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P S+S    L    +G N L+ LP  +G L  L  LD H+N+L         L RLS L 
Sbjct: 228 PDSLSNLHQLYHLDIGGNLLTTLPESIGALENLSVLDAHNNRLTSLPESIGNLQRLSCLS 287

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           L++N L+ LP +   +  L  L L+ N L TL   + N           SRL        
Sbjct: 288 LAHNKLTRLPEQTSHLLRLSTLDLSYNNLMTLPDFVCN----------FSRL-------- 329

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                      T L +   EL++       +P  I   GE+  LD+S N +  LP  ++ 
Sbjct: 330 -----------TNLHLAHNELTM-------LPMHIGYLGELEILDVSNNDLGSLPDSVAK 371

Query: 402 CASL 405
              L
Sbjct: 372 LDKL 375



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 131/255 (51%), Gaps = 2/255 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           + +L +  N + ++   L N   LT LN++ N+L ELPA +G+L  L  L++S N + ++
Sbjct: 145 ITELDIGDNRLTRVPHYLSNFTNLTKLNLARNQLEELPAFLGKLTHLTHLNLSANPLKQL 204

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IG  T L + +   NQL  LP SL     L       N +T+LPE +     +S LD
Sbjct: 205 PDFIGELTNLTELELYGNQLGTLPDSLSNLHQLYHLDIGGNLLTTLPESIGALENLSVLD 264

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              N+LT L  + I +   L+ L  + N L  +PE    L RL  LDL  N ++++P  +
Sbjct: 265 AHNNRLTSLPES-IGNLQRLSCLSLAHNKLTRLPEQTSHLLRLSTLDLSYNNLMTLPDFV 323

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L   ++ +N L+ LP  +G L +L  LD+ +N L        +L +L+ L+LS N
Sbjct: 324 CNFSRLTNLHLAHNELTMLPMHIGYLGELEILDVSNNDLGSLPDSVAKLDKLTTLNLSGN 383

Query: 286 SLSGLPPEIGKMTTL 300
            +  LP  I  +T L
Sbjct: 384 QIPFLPKFIANLTHL 398



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 64/125 (51%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L LAHN + +L E   +L  L+ L++S+N L  LP  +     L +L ++ N +  +P  
Sbjct: 286 LSLAHNKLTRLPEQTSHLLRLSTLDLSYNNLMTLPDFVCNFSRLTNLHLAHNELTMLPMH 345

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           IG    L   D S+N L  LP S+ +   L+    S N I  LP+ +A+ + +  LDV  
Sbjct: 346 IGYLGELEILDVSNNDLGSLPDSVAKLDKLTTLNLSGNQIPFLPKFIANLTHLCILDVRN 405

Query: 170 NKLTV 174
            ++ V
Sbjct: 406 TRMKV 410


>gi|45656982|ref|YP_001068.1| hypothetical protein LIC11098 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087184|ref|ZP_15548025.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104950|ref|ZP_15565543.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600219|gb|AAS69705.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410365260|gb|EKP20655.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430293|gb|EKP74663.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|456983450|gb|EMG19759.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 426

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/328 (33%), Positives = 164/328 (50%), Gaps = 12/328 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N++ ++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+G+L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           KL L  NPL + + + +    P  + Y 
Sbjct: 398 KLYLHNNPLPSEKIARIRKLLPQCIIYF 425



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 161/356 (45%), Gaps = 48/356 (13%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L T        
Sbjct: 265 KNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTT-------- 316

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                       LPEN            I    RL      L L    L+ +P EI +  
Sbjct: 317 ------------LPEN------------IGQLQRLQT----LYLGNNQLNFLPKEIGQLR 348

Query: 381 EITKLDLSRNSIQELPPELSSCASLQ---VKFSDLVTNKESC-----ISGCYLYWN 428
            +  LDL  N +  LP E+     LQ   +K++ L T  E       +   YL+ N
Sbjct: 349 NLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404


>gi|421111699|ref|ZP_15572172.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410802895|gb|EKS09040.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 360

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/296 (34%), Positives = 152/296 (51%), Gaps = 15/296 (5%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           ++Y++  EA     + +  D+  L L+   I+ L   + NL  L  L++ +N+L+ LP  
Sbjct: 32  KIYRDLREA-----FQKPSDVHILSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKE 86

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG+LH L+SL +  N +  +P+EIG    L +   S N L  LP ++GR  NL     S 
Sbjct: 87  IGQLHNLQSLSLYGNLLSTLPEEIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSV 146

Query: 147 NCIT--------SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           N  +         + E++ D   + +L++ GN+LT L    I     L +L  S+N L  
Sbjct: 147 NLRSLIFRSEEIGISEEIGDLQNLKELNLTGNRLTTLPKE-IGKLQSLEKLDLSENSLAI 205

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P+ IG L  L RL L  NR+ + P  I    SL +  + NN+LS LP E+G+L  L  L
Sbjct: 206 LPKEIGRLQNLKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNNSLSTLPKEIGRLKNLREL 265

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L  N+L     E  +L+ L  L L  N L+ LP EIGK   L +L L GN L TL
Sbjct: 266 SLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLEGNRLTTL 321



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 153/335 (45%), Gaps = 53/335 (15%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S  ++  LP  I  L  L+ LD+ +N +  +P EIG    L       N L  LP 
Sbjct: 49  ILSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGNLLSTLPE 108

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G   NL +   S+N + +LPE++     +  LD+  N         + S    +E I 
Sbjct: 109 EIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVN---------LRSLIFRSEEI- 158

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                 G+ E IG L  L  L+L  NR+ ++P  I    SL +  +  N+L+ LP E+G+
Sbjct: 159 ------GISEEIGDLQNLKELNLTGNRLTTLPKEIGKLQSLEKLDLSENSLAILPKEIGR 212

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L  N+L  +  E  +L+ L  LDLSNNSLS LP EIG++  LR+L L GN L
Sbjct: 213 LQNLKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNNSLSTLPKEIGRLKNLRELSLEGNRL 272

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL   +        LK L                              KELSL G  L+
Sbjct: 273 STLPKEI------GRLKNL------------------------------KELSLGGNRLT 296

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            +P EI +   + +L L  N +  LP  ++   SL
Sbjct: 297 TLPKEIGKFQNLIELRLEGNRLTTLPKGIAKLQSL 331



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 117/237 (49%), Gaps = 9/237 (3%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLS--------ELPAAIGELHMLKSLD 97
           +L++L L+HN +  L E++  L  L VL++S N  S         +   IG+L  LK L+
Sbjct: 115 NLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQNLKELN 174

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           ++ N +  +P EIG   +L K D S N L  LP  +GR  NL       N +T+ P+++ 
Sbjct: 175 LTGNRLTTLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTTFPKEIG 234

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
               + KLD+  N L+ L    I     L EL    N L+ +P+ IG L  L  L L  N
Sbjct: 235 KLQSLEKLDLSNNSLSTLPKE-IGRLKNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGN 293

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           R+ ++P  I    +L E  +  N L+ LP  + KL  L +L+L  N L  Y  +  Q
Sbjct: 294 RLTTLPKEIGKFQNLIELRLEGNRLTTLPKGIAKLQSLWSLNLSKNPLSVYEKKRIQ 350



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 24/212 (11%)

Query: 33  DEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHM 92
           +E G  ++  +  +L++L L  N +  L +++  L  L  L++S N L+ LP  IG L  
Sbjct: 156 EEIGISEEIGDLQNLKELNLTGNRLTTLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQN 215

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           LK L +  N +   P EIG   +L K D S+N L  LP  +GR  NL +     N +++L
Sbjct: 216 LKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNNSLSTLPKEIGRLKNLRELSLEGNRLSTL 275

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + +L + GN+LT L                        P+ IG    LI L
Sbjct: 276 PKEIGRLKNLKELSLGGNRLTTL------------------------PKEIGKFQNLIEL 311

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  NR+ ++P  I+   SL    +  N LS 
Sbjct: 312 RLEGNRLTTLPKGIAKLQSLWSLNLSKNPLSV 343



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 106/219 (48%), Gaps = 26/219 (11%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P  I +L  L +LDL  N++ ++P  I    +L    +  N LS LP E+G L  L  L
Sbjct: 60  LPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGNLLSTLPEEIGHLKNLKEL 119

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLS--------GLPPEIGKMTTLRKLLLTGNP 309
            L  N L        +L+ L VLDLS N  S        G+  EIG +  L++L LTGN 
Sbjct: 120 SLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQNLKELNLTGNR 179

Query: 310 LRTLRSSLVNGPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           L TL         P  +  L+S  +L  +E+S A   KE       RL    K LSL+G 
Sbjct: 180 LTTL---------PKEIGKLQSLEKLDLSENSLAILPKE-----IGRLQ-NLKRLSLKGN 224

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            L+  P EI +   + KLDLS NS+  LP E+    +L+
Sbjct: 225 RLTTFPKEIGKLQSLEKLDLSNNSLSTLPKEIGRLKNLR 263



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 116/294 (39%), Gaps = 67/294 (22%)

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S  ++K LP  +    NL       N +T+LP+++     +  L + GN L+ L    I
Sbjct: 52  LSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGNLLSTLPEE-I 110

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN--------RILSIPSSISGCCSL 232
                L EL  S NLL  +PE IG L  L  LDL  N          + I   I    +L
Sbjct: 111 GHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQNL 170

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPP 292
            E  +  N L+ LP E+GKL  L                        LDLS NSL+ LP 
Sbjct: 171 KELNLTGNRLTTLPKEIGKLQSL----------------------EKLDLSENSLAILPK 208

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EIG++  L++L L GN L T          P  +  L+S                     
Sbjct: 209 EIGRLQNLKRLSLKGNRLTTF---------PKEIGKLQS--------------------- 238

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                  ++L L   +LS +P EI     + +L L  N +  LP E+    +L+
Sbjct: 239 ------LEKLDLSNNSLSTLPKEIGRLKNLRELSLEGNRLSTLPKEIGRLKNLK 286



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 13/170 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS  SL  +P E+ +               +L++L L  N +    +++  L  L  L
Sbjct: 196 LDLSENSLAILPKEIGR-------------LQNLKRLSLKGNRLTTFPKEIGKLQSLEKL 242

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S+N LS LP  IG L  L+ L +  N +  +P EIG    L +     N+L  LP  +
Sbjct: 243 DLSNNSLSTLPKEIGRLKNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKEI 302

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           G+  NL + +   N +T+LP+ +A    +  L++  N L+V     I  W
Sbjct: 303 GKFQNLIELRLEGNRLTTLPKGIAKLQSLWSLNLSKNPLSVYEKKRIQKW 352


>gi|24215665|ref|NP_713146.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074857|ref|YP_005989175.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196830|gb|AAN50164.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458647|gb|AER03192.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 408

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 181/378 (47%), Gaps = 24/378 (6%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 44  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 103

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 104 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 162

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 163 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 222

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 223 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 282

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L++L L  N        +       +L   ++RL         TT    I     L 
Sbjct: 283 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRL---------TTLPKEIGQLQNL- 332

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF------- 409
              ++L L    L+ +P EI    ++  L L  N +  LP E+    +L+  +       
Sbjct: 333 ---QKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLL 389

Query: 410 SDLVTNKESCISGCYLYW 427
           S+ +      +  C +Y+
Sbjct: 390 SEKIERIRKLLPQCIIYF 407



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 156/303 (51%), Gaps = 17/303 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+              +  +LQ L   +N +  L +++  L  L  L
Sbjct: 57  LDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 103

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N+L  LP  +
Sbjct: 104 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI 163

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIASWTMLTELIA 191
           GR  NL +   S N +T LPE++     + KL + G NK  T+L    I     L EL  
Sbjct: 164 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQLQNLQELHL 222

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L+ LP E+ +
Sbjct: 223 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 282

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L  N+ + +  E  Q + L VLDL  N L+ LP EIG++  L+KL L+ N L
Sbjct: 283 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQL 342

Query: 311 RTL 313
            TL
Sbjct: 343 TTL 345



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 40/323 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN  N  L  +P E+ K               +LQ+L L +N +  L E++  L  L VL
Sbjct: 80  LNSENNQLTTLPKEIGK-------------LQNLQELHLQNNQLTTLPEEIGQLQNLKVL 126

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N+L+ LP  IG+L  L+ L++  N +  +P EIG    L +   S N+L  LP  +
Sbjct: 127 HLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEI 186

Query: 134 GRCLNLSDFK--ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           G+  +L        N   T LP+++     + +L ++ N+LTVL    I     L  L  
Sbjct: 187 GQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKE-IGQLQNLRILDL 245

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N L  +P+ IG L  L+ LDL  N++  +P  I+   +L E  +  N   A P E+ +
Sbjct: 246 YQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQ 305

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT------------ 298
              L  LDL+ N+L     E  QL+ L  L LS N L+ LP EIG++             
Sbjct: 306 FQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 365

Query: 299 -----------TLRKLLLTGNPL 310
                       L+KL L  NPL
Sbjct: 366 ATLPEEIKQLKNLKKLYLHNNPL 388


>gi|442619581|ref|NP_001262665.1| Sur-8, isoform E [Drosophila melanogaster]
 gi|440217532|gb|AGB96045.1| Sur-8, isoform E [Drosophila melanogaster]
          Length = 694

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 185/396 (46%), Gaps = 52/396 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 234 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 341 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 400

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P       + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G 
Sbjct: 401 NQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGT 460

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N +
Sbjct: 461 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRI 520

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +       LL  L                              + L L+   ++
Sbjct: 521 EVLPHEI------GLLHEL------------------------------QRLILQTNQIT 544

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P  I   G +T L +S N++Q LP E+ S  SL+
Sbjct: 545 MLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 580



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 171/364 (46%), Gaps = 39/364 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           +++L L+ ++I  +   ++    LT L +  NK+ +LP  IG L  L++L ++ NS+  +
Sbjct: 162 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 221

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ + + + L   D   N+L E+P  + R  +L+      N IT++ +DL     ++ L 
Sbjct: 222 PESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLS 281

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK+  L +  I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI
Sbjct: 282 LRENKIRELGS-AIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSN 284
               SL    M  N LS++PA L     +   ++  N + +    + A    L+ + LS 
Sbjct: 341 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 400

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEAST 343
           N  +  P              TG P +      +N      L++ R  ++P    S A  
Sbjct: 401 NQFASYP--------------TGGPAQFTNVYSIN------LEHNRIDKIPYGIFSRAKG 440

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                    T+L++       E M L+A+P +I     + +L+L+ N++Q+LP ++ +  
Sbjct: 441 --------LTKLNMK------ENM-LTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQ 485

Query: 404 SLQV 407
           +L++
Sbjct: 486 NLEI 489


>gi|357627630|gb|EHJ77268.1| putative shoc2 [Danaus plexippus]
          Length = 567

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 200/411 (48%), Gaps = 38/411 (9%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           L   R+   L+L +  L D+P  VYK                L  L L  N I  + + +
Sbjct: 151 LAHLRSLKVLDLRHNKLSDIPEVVYK-------------LTSLTTLFLRFNRIRVVGDGI 197

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
            NL  LT+L++  NK+ EL + IG+L  L + DVS N +  +P EIG+   L   D   N
Sbjct: 198 ANLTNLTMLSLRENKIKELSSGIGKLVNLVTFDVSHNHLEHLPQEIGNCVNLSTLDLQHN 257

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +L ++P ++G    L+      N + ++P  L++C  M + +VEGN ++ L + L+ S T
Sbjct: 258 ELLDIPDTIGNLQALNRIGLRYNRLNAIPASLSNCKHMDEFNVEGNSISQLPDGLLCSLT 317

Query: 185 MLTELIASKNLL----NGMPETIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGN 239
            LT L  S+N      +G P    S+S    ++L  N+I  IP  I S   +L +  M  
Sbjct: 318 ELTSLTLSRNSFMSYPSGGPAQFTSVS---SINLEHNQIDKIPYGIFSRAKNLTKLIMKE 374

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L++LP ++G  + +  L+L +NQL +   +   L  L VL LSNN L  +PP IG + 
Sbjct: 375 NLLTSLPLDIGTWTNMVELNLGTNQLVKLPDDIQSLINLEVLILSNNLLKRIPPSIGNLR 434

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NEDSEASTTKEDLITMATRLSV 357
            LR L L  N +  L + +        L+ L+  + + N+ +    +   LI + T LSV
Sbjct: 435 KLRVLDLEENKIEILPNEI------GFLQELKKLIVQSNQLTSLPRSIGHLINL-TYLSV 487

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
                     NL  +P EI     +  L L+ N ++  LP EL+ C SLQ+
Sbjct: 488 GEN-------NLQYLPEEIGTLENLESLYLNDNPNLCNLPFELALCVSLQI 531


>gi|418752844|ref|ZP_13309101.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966796|gb|EKO34636.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 539

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 168/364 (46%), Gaps = 19/364 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++ NL  L  L++  N+L+ LP  IG+L  LK L +  N    
Sbjct: 159 NLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIGKLQKLKELHLDGNQFTT 218

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L +    SN+   LP  + +  NL      +N  T+LP+++ +  K+ KL
Sbjct: 219 LPKEIGKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKL 278

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L    I     L  L    N L  +P+ IG L  L  L L +N++ +IP  
Sbjct: 279 SLAHNQLTTLPKE-IGKLQSLQRLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKE 337

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    SL    +  N L+ LP E+GKL  L  L L  NQL     E  QL+ L  L LS 
Sbjct: 338 IGKLQSLQSLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIWQLQYLQRLSLSF 397

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ +P EI K+  L+KL L  N L TL   + N      L+ L+         E    
Sbjct: 398 NQLTAIPKEIEKLQNLQKLHLRNNQLTTLPKEIGN------LQKLQ---------ELDLG 442

Query: 345 KEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
              L  +   +      K+L L    L+ +P EI +  ++  L L+ N +  LP E+   
Sbjct: 443 YNQLTALPEEIGKLQNLKDLYLNNNKLTTLPKEIGKLQKLKDLYLNNNKLTTLPKEIEKL 502

Query: 403 ASLQ 406
             L+
Sbjct: 503 QKLK 506



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 179/388 (46%), Gaps = 29/388 (7%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL-------LTVLNVSHNKL 80
           VY N  EA +        D+Q L L     +   + L  LP        L  L++S N+L
Sbjct: 93  VYYNLTEALQ-----HPTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQL 147

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           + LP  IG L  L+ L+++ N    +P EI +   L K     NQL  LP  +G+   L 
Sbjct: 148 TTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIGKLQKLK 207

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
           +     N  T+LP+++    K+ +L +  N+ T L    I     L  L    N    +P
Sbjct: 208 ELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPKE-IKKLQNLQWLNLDSNRFTTLP 266

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG+L +L +L L  N++ ++P  I    SL    +  N L+ LP E+GKL  L  L L
Sbjct: 267 KEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWGNQLTTLPKEIGKLQSLQELIL 326

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             NQL     E  +L+ L  L L  N L+ LP EIGK+ +L++L+L  N L T+   +  
Sbjct: 327 GKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIWQ 386

Query: 320 GPTPALLKYL-RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                 L+YL R  L  N+ +      E L  +        ++L L    L+ +P EI  
Sbjct: 387 ------LQYLQRLSLSFNQLTAIPKEIEKLQNL--------QKLHLRNNQLTTLPKEIGN 432

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQ 406
             ++ +LDL  N +  LP E+    +L+
Sbjct: 433 LQKLQELDLGYNQLTALPEEIGKLQNLK 460



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 142/294 (48%), Gaps = 27/294 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N    L ++++ L  L  LN+  N+ + LP  IG L  L+ L ++ N +  +
Sbjct: 229 LKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTL 288

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG   +L +     NQL  LP  +G+  +L +     N +T++P+++     +  L 
Sbjct: 289 PKEIGKLQSLQRLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIGKLQSLQSLT 348

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+LT L    I     L ELI  KN L  +P+ I  L  L RL L  N++ +IP  I
Sbjct: 349 LWGNQLTTLPKE-IGKLQSLQELILGKNQLTTIPKEIWQLQYLQRLSLSFNQLTAIPKEI 407

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----------- 275
               +L + ++ NN L+ LP E+G L KL  LDL  NQL     E  +L           
Sbjct: 408 EKLQNLQKLHLRNNQLTTLPKEIGNLQKLQELDLGYNQLTALPEEIGKLQNLKDLYLNNN 467

Query: 276 -------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
                        +L  L L+NN L+ LP EI K+  L+ L L  NP   LRS 
Sbjct: 468 KLTTLPKEIGKLQKLKDLYLNNNKLTTLPKEIEKLQKLKNLHLADNPF--LRSQ 519


>gi|320162772|gb|EFW39671.1| leucine-rich repeat protein SHOC-2 [Capsaspora owczarzaki ATCC
           30864]
          Length = 490

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 188/386 (48%), Gaps = 41/386 (10%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           +    L KL L +N +  +  D+ NL  L +L++ +NK++ELPA++G L  L+ LD+  N
Sbjct: 39  YRMKQLSKLYLRYNKLTWISHDIGNLTGLNILSIRNNKITELPASLGNLAGLQILDLMNN 98

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P  IG  + L   +   N+L+ LP  +G  + L  F    N +  LP  + +C  
Sbjct: 99  CLTALPSSIGKLSRLSSLNVEYNKLERLPEEIGNLVKLKHFGLRYNSLVELPLAIKNCVL 158

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI----------- 210
           + +L+VEGNKL VL   +++    +  L  S+N    +P  +G+L++L            
Sbjct: 159 LEELNVEGNKLVVLPTGILSQLVNVNNLQLSRNNFTTIPADLGALTKLEIFNMDNNSVRE 218

Query: 211 -------------RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
                        +++L+ N I SIP+ I    SL E  +G+N L  LP  LG+L  L +
Sbjct: 219 IPAGIFSSLKLLGKINLNYNSITSIPNDIGDLVSLREINLGSNKLELLPETLGQLVNLES 278

Query: 258 LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L L +N L      A +L +L VLDL  N L+ L PEIG +  L +L    N L  L  S
Sbjct: 279 LVLGNNNLSALPESASRLVKLRVLDLEGNRLTRL-PEIGSLAALEELHAQSNRLTALPQS 337

Query: 317 LVNGPTPALLKYLR-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
           L N      L  LR   + EN+ +E        +++    S+TS    +    LS +P E
Sbjct: 338 LGN------LHALRLFYVGENQLTELP------LSIGQLKSLTS--FHVNDNRLSDVPCE 383

Query: 376 IWEAGEITKLDLSRNSIQELPPELSS 401
           +    ++  L+L  N +  +PP ++S
Sbjct: 384 LANCLKLQLLNLDDNPLTAIPPNVTS 409



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 166/332 (50%), Gaps = 19/332 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I K +R S SLN+    L  +P E+                V L+   L +N++ +L   
Sbjct: 107 IGKLSRLS-SLNVEYNKLERLPEEI-------------GNLVKLKHFGLRYNSLVELPLA 152

Query: 64  LRNLPLLTVLNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++N  LL  LNV  NKL  LP  I  +L  + +L +S N+   IP ++G+ T L  F+  
Sbjct: 153 IKNCVLLEELNVEGNKLVVLPTGILSQLVNVNNLQLSRNNFTTIPADLGALTKLEIFNMD 212

Query: 123 SNQLKELPSSLGRCLNL-SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +N ++E+P+ +   L L      + N ITS+P D+ D   + ++++  NKL +L   L  
Sbjct: 213 NNSVREIPAGIFSSLKLLGKINLNYNSITSIPNDIGDLVSLREINLGSNKLELLPETL-G 271

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L  L+   N L+ +PE+   L +L  LDL  NR+  +P  I    +L E +  +N 
Sbjct: 272 QLVNLESLVLGNNNLSALPESASRLVKLRVLDLEGNRLTRLPE-IGSLAALEELHAQSNR 330

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L+ALP  LG L  L    +  NQL E  +   QL+ L+   +++N LS +P E+     L
Sbjct: 331 LTALPQSLGNLHALRLFYVGENQLTELPLSIGQLKSLTSFHVNDNRLSDVPCELANCLKL 390

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           + L L  NPL  +  ++ +G   A++ YLR +
Sbjct: 391 QLLNLDDNPLTAIPPNVTSGGPSAVMVYLRKK 422



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 179/363 (49%), Gaps = 26/363 (7%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           H  +  L ++L  L  L VL++ HNK +E+P  I  +  L  L + +N +  I  +IG+ 
Sbjct: 5   HPQLTSLPDELELLKNLNVLDLRHNKFTEVPPVIYRMKQLSKLYLRYNKLTWISHDIGNL 64

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           T L      +N++ ELP+SLG    L      NNC+T+LP  +   S++S L+VE NKL 
Sbjct: 65  TGLNILSIRNNKITELPASLGNLAGLQILDLMNNCLTALPSSIGKLSRLSSLNVEYNKLE 124

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI-SGCCSL 232
            L    I +   L       N L  +P  I +   L  L++  N+++ +P+ I S   ++
Sbjct: 125 RLPEE-IGNLVKLKHFGLRYNSLVELPLAIKNCVLLEELNVEGNKLVVLPTGILSQLVNV 183

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY---CVEACQLRLSVLDLSNNSLSG 289
               +  N  + +PA+LG L+KL   ++ +N ++E       + +L L  ++L+ NS++ 
Sbjct: 184 NNLQLSRNNFTTIPADLGALTKLEIFNMDNNSVREIPAGIFSSLKL-LGKINLNYNSITS 242

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSS---LVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           +P +IG + +LR++ L  N L  L  +   LVN  +  L     S LPE+          
Sbjct: 243 IPNDIGDLVSLREINLGSNKLELLPETLGQLVNLESLVLGNNNLSALPES---------- 292

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                A+RL V  + L LEG  L+ +P EI     + +L    N +  LP  L +  +L+
Sbjct: 293 -----ASRL-VKLRVLDLEGNRLTRLP-EIGSLAALEELHAQSNRLTALPQSLGNLHALR 345

Query: 407 VKF 409
           + +
Sbjct: 346 LFY 348



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 139/289 (48%), Gaps = 17/289 (5%)

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           C   QL  LP  L    NL+     +N  T +P  +    ++SKL +  NKLT +S++ I
Sbjct: 3   CYHPQLTSLPDELELLKNLNVLDLRHNKFTEVPPVIYRMKQLSKLYLRYNKLTWISHD-I 61

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            + T L  L    N +  +P ++G+L+ L  LDL  N + ++PSSI     L+   +  N
Sbjct: 62  GNLTGLNILSIRNNKITELPASLGNLAGLQILDLMNNCLTALPSSIGKLSRLSSLNVEYN 121

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEI-GKM 297
            L  LP E+G L KL    L  N L E    ++ C L L  L++  N L  LP  I  ++
Sbjct: 122 KLERLPEEIGNLVKLKHFGLRYNSLVELPLAIKNCVL-LEELNVEGNKLVVLPTGILSQL 180

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             +  L L+ N   T+ + L      AL K       E  + + ++ +E    + + L +
Sbjct: 181 VNVNNLQLSRNNFTTIPADL-----GALTKL------EIFNMDNNSVREIPAGIFSSLKL 229

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             K ++L   ++++IP++I +   + +++L  N ++ LP  L    +L+
Sbjct: 230 LGK-INLNYNSITSIPNDIGDLVSLREINLGSNKLELLPETLGQLVNLE 277



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 37/263 (14%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +TSLP++L     ++ LD+  NK T +   +I     L++L    N L  +   IG+L+ 
Sbjct: 8   LTSLPDELELLKNLNVLDLRHNKFTEVPP-VIYRMKQLSKLYLRYNKLTWISHDIGNLTG 66

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L +  N+I  +P+S+     L    + NN L+ALP+ +GKLS+L +L++  N+L+  
Sbjct: 67  LNILSIRNNKITELPASLGNLAGLQILDLMNNCLTALPSSIGKLSRLSSLNVEYNKLERL 126

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E   L +L    L  NSL  LP  I     L +L + GN L  L       PT  L  
Sbjct: 127 PEEIGNLVKLKHFGLRYNSLVELPLAIKNCVLLEELNVEGNKLVVL-------PTGIL-- 177

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              S+L                       V    L L   N + IP+++    ++   ++
Sbjct: 178 ---SQL-----------------------VNVNNLQLSRNNFTTIPADLGALTKLEIFNM 211

Query: 388 SRNSIQELPPELSSCASLQVKFS 410
             NS++E+P  + S   L  K +
Sbjct: 212 DNNSVREIPAGIFSSLKLLGKIN 234


>gi|418727611|ref|ZP_13286199.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958969|gb|EKO22746.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 379

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 153/309 (49%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +L+LS    + +P E+   KN  E          +        +L+KL L+ N I+ + +
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 171

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQ+K +P  + +   L      NN +T+LP+++     +  LD+  N+LT L    I  
Sbjct: 172 YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGH 230

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P  IG L  L  L+L  NR+ ++   I    +L    +G+N L
Sbjct: 231 LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLGSNQL 290

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G+L  L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L+
Sbjct: 291 TTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQ 350

Query: 302 KLLLTGNPL 310
           +L L  N L
Sbjct: 351 ELFLNNNQL 359



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 55  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL  LP  +G+   L       N +T+LP+++     +  L++  N+
Sbjct: 115 KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  +    I     L  L    N L  +P+ IG L  L  LDL  NR+ ++P  I    +
Sbjct: 175 IKTIPKK-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQN 233

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L + Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  LDL +N L+  
Sbjct: 234 LQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLGSNQLTTF 293

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P EIG++  L+ L L  N L TL
Sbjct: 294 PKEIGQLKNLQVLDLGSNQLTTL 316



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 143/337 (42%), Gaps = 61/337 (18%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++S N+   LP  IG+L  L+ L+++ N +  +P EIG    L K + S+NQ+K +P 
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +   L      NN +T+LP+++    K+                    W     L  
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQ-------------------W-----LYL 147

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            KN L  +P+ IG L  L  L+L  N+I +IP  I     L    + NN L+ LP E+G+
Sbjct: 148 PKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           L  L +LDL                      S N L+ LP EIG +  L+ L L  N L 
Sbjct: 208 LQNLQSLDL----------------------STNRLTTLPQEIGHLQNLQDLYLVSNQLT 245

Query: 312 TLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            L + +        LK L++  L  N  +  S   E L  +        K L L    L+
Sbjct: 246 ILPNEI------GQLKNLQTLNLRNNRLTTLSKEIEQLQNL--------KSLDLGSNQLT 291

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             P EI +   +  LDL  N +  LP  +    +LQ 
Sbjct: 292 TFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQT 328



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + + +  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 164 NLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 224 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 284 DLGSNQLTTFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 342

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 343 IGQLQNLQELFLNNNQLSS 361



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 135/291 (46%), Gaps = 35/291 (12%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   L +     S N   +LP+++     + +L++  N+LT+L    I     L 
Sbjct: 39  DLAKTLQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKE-IGQLKNLR 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           +L  S N +  +P+ I  L +L  L L  N++ ++P  I     L   Y+  N L+ LP 
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ 157

Query: 248 ELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           E+G+L  L +L+L  NQ+K     +E  Q +L  L L NN L+ LP EIG++  L+ L L
Sbjct: 158 EIGQLKNLKSLNLSYNQIKTIPKKIEKLQ-KLQSLGLDNNQLTTLPQEIGQLQNLQSLDL 216

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---- 361
           + N L TL         P  + +L++              +DL  ++ +L++   E    
Sbjct: 217 STNRLTTL---------PQEIGHLQNL-------------QDLYLVSNQLTILPNEIGQL 254

Query: 362 -----LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
                L+L    L+ +  EI +   +  LDL  N +   P E+    +LQV
Sbjct: 255 KNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLGSNQLTTFPKEIGQLKNLQV 305



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 101/207 (48%), Gaps = 18/207 (8%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 53  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 112

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 113 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 166

Query: 331 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 167 SLNLSYNQIKTIPKKIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 218

Query: 390 NSIQELPPELSSCASLQVKFSDLVTNK 416
           N +  LP E+    +LQ  +  LV+N+
Sbjct: 219 NRLTTLPQEIGHLQNLQDLY--LVSNQ 243


>gi|261277896|sp|B4QVR7.2|SUR8_DROSI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
          Length = 680

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 185/396 (46%), Gaps = 52/396 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 234 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 341 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 400

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P       + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G 
Sbjct: 401 NQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGT 460

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N +
Sbjct: 461 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRI 520

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +       LL  L                              + L L+   ++
Sbjct: 521 EVLPHEI------GLLHEL------------------------------QRLILQTNQIT 544

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P  I   G +T L +S N++Q LP E+ S  SL+
Sbjct: 545 MLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 580



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 173/371 (46%), Gaps = 39/371 (10%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K  +   +++L L+ ++I  +   ++    LT L +  NK+ +LP  IG L  L++L ++
Sbjct: 155 KALQRCRIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALN 214

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            NS+  +P+ + + + L   D   N+L E+P  + R  +L+      N IT++ +DL   
Sbjct: 215 ENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQL 274

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
             ++ L +  NK+  L +  I +   LT L  S N L  +PE IG+   L  LDL  N +
Sbjct: 275 VNLTMLSLRENKIRELGS-AIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNEL 333

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRL 277
           L IP SI    SL    M  N LS++PA L     +   ++  N + +    + A    L
Sbjct: 334 LDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGL 393

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPEN 336
           + + LS N  +  P              TG P +      +N      L++ R  ++P  
Sbjct: 394 TTITLSRNQFASYP--------------TGGPAQFTNVYSIN------LEHNRIDKIPYG 433

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
             S A           T+L++       E M L+A+P +I     + +L+L+ N++Q+LP
Sbjct: 434 IFSRAKG--------LTKLNMK------ENM-LTALPLDIGTWVNMVELNLATNALQKLP 478

Query: 397 PELSSCASLQV 407
            ++ +  +L++
Sbjct: 479 DDIMNLQNLEI 489


>gi|221379722|ref|NP_732231.2| Sur-8, isoform A [Drosophila melanogaster]
 gi|221379725|ref|NP_650620.3| Sur-8, isoform B [Drosophila melanogaster]
 gi|442619579|ref|NP_001262664.1| Sur-8, isoform F [Drosophila melanogaster]
 gi|261277919|sp|Q9VEK6.3|SUR8_DROME RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|21711803|gb|AAM75092.1| RH55123p [Drosophila melanogaster]
 gi|220903112|gb|AAF55415.3| Sur-8, isoform A [Drosophila melanogaster]
 gi|220903113|gb|AAN13743.2| Sur-8, isoform B [Drosophila melanogaster]
 gi|440217531|gb|AGB96044.1| Sur-8, isoform F [Drosophila melanogaster]
          Length = 641

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 188/396 (47%), Gaps = 52/396 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 234 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 280

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 341 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 400

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P       + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G 
Sbjct: 401 NQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGT 460

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N +
Sbjct: 461 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRI 520

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +       LL  L+                       RL + + ++++      
Sbjct: 521 EVLPHEI------GLLHELQ-----------------------RLILQTNQITM------ 545

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P  I   G +T L +S N++Q LP E+ S  SL+
Sbjct: 546 -LPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 580



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 171/364 (46%), Gaps = 39/364 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           +++L L+ ++I  +   ++    LT L +  NK+ +LP  IG L  L++L ++ NS+  +
Sbjct: 162 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 221

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ + + + L   D   N+L E+P  + R  +L+      N IT++ +DL     ++ L 
Sbjct: 222 PESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLS 281

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK+  L +  I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI
Sbjct: 282 LRENKIRELGS-AIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSN 284
               SL    M  N LS++PA L     +   ++  N + +    + A    L+ + LS 
Sbjct: 341 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 400

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEAST 343
           N  +  P              TG P +      +N      L++ R  ++P    S A  
Sbjct: 401 NQFASYP--------------TGGPAQFTNVYSIN------LEHNRIDKIPYGIFSRAKG 440

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                    T+L++       E M L+A+P +I     + +L+L+ N++Q+LP ++ +  
Sbjct: 441 --------LTKLNMK------ENM-LTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQ 485

Query: 404 SLQV 407
           +L++
Sbjct: 486 NLEI 489


>gi|195501949|ref|XP_002098015.1| GE24170 [Drosophila yakuba]
 gi|261277890|sp|B4PU77.1|SUR8_DROYA RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194184116|gb|EDW97727.1| GE24170 [Drosophila yakuba]
          Length = 645

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 185/396 (46%), Gaps = 52/396 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 238 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 284

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 285 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 344

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 345 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 404

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P       + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G 
Sbjct: 405 NQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGT 464

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N +
Sbjct: 465 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRI 524

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +       LL  L                              + L L+   ++
Sbjct: 525 EVLPHEI------GLLHEL------------------------------QRLILQTNQIT 548

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P  I   G +T L +S N++Q LP E+ S  SL+
Sbjct: 549 MLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 584



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 171/364 (46%), Gaps = 39/364 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           +++L L+ ++I  +   ++    LT L +  NK+ +LP  IG L  L++L ++ NS+  +
Sbjct: 166 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 225

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ + + + L   D   N+L E+P  + R  +L+      N IT++ +DL     ++ L 
Sbjct: 226 PESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLS 285

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK+  L +  I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI
Sbjct: 286 LRENKIRELGS-AIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 344

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSN 284
               SL    M  N LS++PA L     +   ++  N + +    + A    L+ + LS 
Sbjct: 345 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 404

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEAST 343
           N  +  P              TG P +      +N      L++ R  ++P    S A  
Sbjct: 405 NQFASYP--------------TGGPAQFTNVYSIN------LEHNRIDKIPYGIFSRAKG 444

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                    T+L++       E M L+A+P +I     + +L+L+ N++Q+LP ++ +  
Sbjct: 445 --------LTKLNMK------ENM-LTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQ 489

Query: 404 SLQV 407
           +L++
Sbjct: 490 NLEI 493


>gi|427736832|ref|YP_007056376.1| hypothetical protein Riv7116_3370 [Rivularia sp. PCC 7116]
 gi|427371873|gb|AFY55829.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 421

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 202/422 (47%), Gaps = 52/422 (12%)

Query: 3   RILKAARTSG--SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           +I++     G  +LNLS   L  +P E+ K               +L+ L L +N++ +L
Sbjct: 9   KIIEQTEKEGLTTLNLSGEDLHFLPKEIKK-------------LPNLEYLYLGNNHLTEL 55

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            E++  L  L +L++S+N +   P  I +L  LK L +  N +  +P+EIG+   L   D
Sbjct: 56  PEEIEQLKKLKLLDLSNNLIKSFPLGIAKLTNLKVLSLDDNYLNNLPEEIGNLNNLEYLD 115

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL- 179
            S+NQL +LP   G+ + L +     N +TSLP +    SK+ +LD+  N+LT L     
Sbjct: 116 LSNNQLNQLPPEFGKLIKLQELCLEGNQLTSLPCEFGQLSKLKELDLLENELTYLPEEFG 175

Query: 180 ---------------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
                                I     L  L   +N L  +P  +G LS+L +L+L  N+
Sbjct: 176 KLINLQKVDLGNNKLITLPKEIGQLANLELLEIGENQLTSLPPELGKLSKLKQLNLSVNQ 235

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           +  +P S +   +L   Y+ +N  + LPAE+ +L+ L +L +  NQL     E  QL  L
Sbjct: 236 LSDLPLSQAKLINLKTLYLCSNQFTKLPAEISRLTNLKSLYVIQNQLNNLTPEIGQLSNL 295

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
            +LD+S N L+ LP EI K+T+LR  +L  N L  L   + +     L   +   L EN+
Sbjct: 296 ELLDISENKLNSLPTEIEKLTSLRYFILNVNHLSNLPKEIGH-----LTNLVTLNLQENQ 350

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            +   T  E L+ +          L L    +S +P EI +  ++  LDLS+N I  +PP
Sbjct: 351 LTTLPTEIEKLMNLEY--------LFLSENKISNLPIEIKQLTKLKHLDLSKNPIS-IPP 401

Query: 398 EL 399
           E+
Sbjct: 402 EI 403



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 153/310 (49%), Gaps = 23/310 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N + +L  +   L  L  L +  N+L+ LP   G+L  LK LD+  N +  
Sbjct: 110 NLEYLDLSNNQLNQLPPEFGKLIKLQELCLEGNQLTSLPCEFGQLSKLKELDLLENELTY 169

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+E G    L K D  +N+L  LP  +G+  NL   +   N +TSLP +L   SK+ +L
Sbjct: 170 LPEEFGKLINLQKVDLGNNKLITLPKEIGQLANLELLEIGENQLTSLPPELGKLSKLKQL 229

Query: 166 DVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPETI 203
           ++  N+L+ L                SN        I+  T L  L   +N LN +   I
Sbjct: 230 NLSVNQLSDLPLSQAKLINLKTLYLCSNQFTKLPAEISRLTNLKSLYVIQNQLNNLTPEI 289

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G LS L  LD+ +N++ S+P+ I    SL  F +  N LS LP E+G L+ L TL+L  N
Sbjct: 290 GQLSNLELLDISENKLNSLPTEIEKLTSLRYFILNVNHLSNLPKEIGHLTNLVTLNLQEN 349

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           QL     E  +L  L  L LS N +S LP EI ++T L+ L L+ NP+      L   P 
Sbjct: 350 QLTTLPTEIEKLMNLEYLFLSENKISNLPIEIKQLTKLKHLDLSKNPISIPPEILKEKPQ 409

Query: 323 PALLKYLRSR 332
             L  Y  S 
Sbjct: 410 KILNCYFTSH 419



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 122/377 (32%), Positives = 179/377 (47%), Gaps = 16/377 (4%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L  L L+  ++  L ++++ LP L  L + +N L+ELP  I +L  LK LD+S N 
Sbjct: 15  EKEGLTTLNLSGEDLHFLPKEIKKLPNLEYLYLGNNHLTELPEEIEQLKKLKLLDLSNNL 74

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           I   P  I   T L       N L  LP  +G   NL     SNN +  LP +     K+
Sbjct: 75  IKSFPLGIAKLTNLKVLSLDDNYLNNLPEEIGNLNNLEYLDLSNNQLNQLPPEFGKLIKL 134

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            +L +EGN+LT L        + L EL   +N L  +PE  G L  L ++DL  N+++++
Sbjct: 135 QELCLEGNQLTSLPCE-FGQLSKLKELDLLENELTYLPEEFGKLINLQKVDLGNNKLITL 193

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P  I    +L    +G N L++LP ELGKLSKL  L+L  NQL +  +   +L  L  L 
Sbjct: 194 PKEIGQLANLELLEIGENQLTSLPPELGKLSKLKQLNLSVNQLSDLPLSQAKLINLKTLY 253

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENED 338
           L +N  + LP EI ++T L+ L +  N L  L   +       LL    ++   LP   +
Sbjct: 254 LCSNQFTKLPAEISRLTNLKSLYVIQNQLNNLTPEIGQLSNLELLDISENKLNSLP--TE 311

Query: 339 SEASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSR 389
            E  T+    I     LS   KE         L+L+   L+ +P+EI +   +  L LS 
Sbjct: 312 IEKLTSLRYFILNVNHLSNLPKEIGHLTNLVTLNLQENQLTTLPTEIEKLMNLEYLFLSE 371

Query: 390 NSIQELPPELSSCASLQ 406
           N I  LP E+     L+
Sbjct: 372 NKISNLPIEIKQLTKLK 388


>gi|417785421|ref|ZP_12433125.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951286|gb|EKO05801.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 408

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 182/378 (48%), Gaps = 24/378 (6%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 44  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 103

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 104 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 162

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 163 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 222

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 223 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 282

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L++L L  N        +       +L   ++RL        +   E++  +     
Sbjct: 283 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRL--------TILPEEIGQLQ---- 330

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF------- 409
              ++L L    L+ +P EI    ++  L L  N +  LP E+    +L+  +       
Sbjct: 331 -NLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLL 389

Query: 410 SDLVTNKESCISGCYLYW 427
           S+ +      +  C +Y+
Sbjct: 390 SEKIERIRKLLPQCIIYF 407



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 158/312 (50%), Gaps = 17/312 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK       L+LS   L+ +P E+              +  +LQ L   +N +  L +++
Sbjct: 48  LKNPNEVRILDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEI 94

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N
Sbjct: 95  GKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVN 154

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIAS 182
           +L  LP  +GR  NL +   S N +T LPE++     + KL + G NK  T+L    I  
Sbjct: 155 RLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQ 213

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L EL    N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L
Sbjct: 214 LQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQL 273

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+ +L  L  L+L  N+ + +  E  Q + L VLDL  N L+ LP EIG++  L+
Sbjct: 274 TILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQ 333

Query: 302 KLLLTGNPLRTL 313
           KL L+ N L TL
Sbjct: 334 KLHLSRNQLTTL 345



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 40/323 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN  N  L  +P E+ K               +LQ+L L +N +  L E++  L  L VL
Sbjct: 80  LNSENNQLTTLPKEIGK-------------LQNLQELHLQNNQLTTLPEEIGQLQNLKVL 126

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N+L+ LP  IG+L  L+ L++  N +  +P EIG    L +   S N+L  LP  +
Sbjct: 127 HLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEI 186

Query: 134 GRCLNLSDFK--ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           G+  +L        N   T LP+++     + +L ++ N+LTVL    I     L  L  
Sbjct: 187 GQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKE-IGQLQNLRILDL 245

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N L  +P+ IG L  L+ LDL  N++  +P  I+   +L E  +  N   A P E+ +
Sbjct: 246 YQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQ 305

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT------------ 298
              L  LDL+ N+L     E  QL+ L  L LS N L+ LP EIG++             
Sbjct: 306 FQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 365

Query: 299 -----------TLRKLLLTGNPL 310
                       L+KL L  NPL
Sbjct: 366 ATLPEEIKQLKNLKKLYLHNNPL 388


>gi|91091582|ref|XP_968188.1| PREDICTED: similar to shoc2 [Tribolium castaneum]
 gi|270001034|gb|EEZ97481.1| hypothetical protein TcasGA2_TC011315 [Tribolium castaneum]
          Length = 565

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 195/401 (48%), Gaps = 36/401 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L D+P+ VYK                L  L L  N I  + +++R L  LT+L
Sbjct: 158 LDLRHNKLNDIPDVVYK-------------LTSLTTLFLRFNRIRYVDDEIRFLTSLTML 204

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELPA IG+L  L + DVS N +  +P+EIG    L   D   N+L ++P ++
Sbjct: 205 SLRENKIKELPAGIGKLVNLVTFDVSHNHLEHLPEEIGQCINLSTLDLQHNELLDIPDTI 264

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L+      N ++ +P  L++C  M + +VEGN ++ L   L++S + LT +  S+
Sbjct: 265 GELQQLTRLGLRYNRLSFIPSSLSNCRHMDEFNVEGNAISQLPEGLLSSLSELTSITLSR 324

Query: 194 NLLNGMPETIGSLSRLIRLD---LHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P   G  S+   +D   L  N+I  IP  I S    L +  M  N L++LP ++
Sbjct: 325 NNFAAYPS--GGPSQFTNVDSINLEHNQIDKIPYGIFSRAKHLTKLNMKENQLTSLPLDV 382

Query: 250 GKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G  + +  L+L +NQL +    ++A Q  L VL LSNN L  +PP +G +  LR L L  
Sbjct: 383 GTWTNMVELNLGTNQLGKLPDDIQALQ-ALEVLVLSNNLLRRIPPSVGNLRKLRVLDLEE 441

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L         P  + YLR        S   T+    I     L      LS+   
Sbjct: 442 NRLEQL---------PNEIGYLRDLQRLIVQSNQLTSLPRAIGHLANLVF----LSVGEN 488

Query: 368 NLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           NL+ +P EI     +  L ++ N S+  LP EL+ C++LQ+
Sbjct: 489 NLAYLPEEIGTLENLESLYVNDNPSLHNLPFELALCSNLQI 529



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 154/341 (45%), Gaps = 52/341 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L    ++HN++E L E++     L+ L++ HN+L ++P  IGEL  L  L + +N + 
Sbjct: 222 VNLVTFDVSHNHLEHLPEEIGQCINLSTLDLQHNELLDIPDTIGELQQLTRLGLRYNRLS 281

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSS-------------------------------- 132
            IP  + +   + +F+   N + +LP                                  
Sbjct: 282 FIPSSLSNCRHMDEFNVEGNAISQLPEGLLSSLSELTSITLSRNNFAAYPSGGPSQFTNV 341

Query: 133 -----------------LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
                              R  +L+      N +TSLP D+   + M +L++  N+L  L
Sbjct: 342 DSINLEHNQIDKIPYGIFSRAKHLTKLNMKENQLTSLPLDVGTWTNMVELNLGTNQLGKL 401

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
            ++ I +   L  L+ S NLL  +P ++G+L +L  LDL +NR+  +P+ I     L   
Sbjct: 402 PDD-IQALQALEVLVLSNNLLRRIPPSVGNLRKLRVLDLEENRLEQLPNEIGYLRDLQRL 460

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN-SLSGLPPE 293
            + +N L++LP  +G L+ L  L +  N L     E   L  L  L +++N SL  LP E
Sbjct: 461 IVQSNQLTSLPRAIGHLANLVFLSVGENNLAYLPEEIGTLENLESLYVNDNPSLHNLPFE 520

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           +   + L+ + +   PL  + + +V G    +++YL+ + P
Sbjct: 521 LALCSNLQIMSIENCPLSQIPAEIVAGGPSLVIQYLKMQGP 561


>gi|440796624|gb|ELR17733.1| Fbox domain containing protein [Acanthamoeba castellanii str. Neff]
          Length = 1783

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 180/349 (51%), Gaps = 18/349 (5%)

Query: 45   VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
             +L  L L  N+++ L  ++ +L  LT L++S N+L ELP  +G+L  L  LD+S NS+ 
Sbjct: 1201 TNLNSLWLYTNSLKVLPPEIEHLQSLTELHMSVNQLRELPKELGKLTNLTHLDLSRNSLQ 1260

Query: 105  KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             +P+E+G  T L +     N+LK+ P  + + ++L       N IT LPE L+  + +  
Sbjct: 1261 SLPEELGELTNLRQILLHRNRLKQFPLFVTKLVSLERLDLDTNAITHLPESLSQLTNLVL 1320

Query: 165  LDVEGNKLTVLSNNLIA-SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            LD+  N++T  +    A + T L  L    N L  +P+ IG L++L  L+L +NR+ ++P
Sbjct: 1321 LDLNRNRITEAAALRPACALTSLQALFVGMNGLTALPDEIGRLTQLESLNLIENRLTALP 1380

Query: 224  SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
             ++    +L   Y   N L+++P ELG L+ L +LDL  N+L+         RL V  + 
Sbjct: 1381 PALGQLTALKYVYACYNRLTSVPDELGGLTNLQSLDLSHNELRAVFDVRRLARLEVFSVY 1440

Query: 284  NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
             N LS +PP +G++T+L++L L  N   T        P P         + E     A+T
Sbjct: 1441 KNCLSRVPPGLGQLTSLKRLWLGINAFHT------EPPPP---------MSELSTVAAAT 1485

Query: 344  TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
            T E +  +A   S+  + L++ G ++ ++P  +     +  L L RN +
Sbjct: 1486 TTESIDEVAELRSL--RVLNMRGNDIHSVPEALSRLTNLDVLSLWRNKL 1532



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 176/397 (44%), Gaps = 66/397 (16%)

Query: 45   VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
             +L +L L HN +  L   +  L  L  LN+  NKL  LP  +G+L  L SL +S+N + 
Sbjct: 1033 TNLIELDLKHNRLTSLPPAISRLQNLVWLNLDENKLESLPDELGQLTNLTSLFLSYNRLT 1092

Query: 105  KIPDEIGSATALVKFDCSSNQLKELPSS-LGRCLNLSD-FKASNNCITSLPED----LAD 158
             +PD +   TAL     ++NQL+ LP +      NL + +   N  + SL  +    +A 
Sbjct: 1093 SLPDTMSRLTALTGVGLNANQLRSLPDTWFANARNLRELYFWRNPMLGSLAPNVDAGMAG 1152

Query: 159  CSKMSKLDVE-----------------------GNKLTVLSNNLIASWTMLTELIASKNL 195
             + +SKL+V                        GNKL  +  NL    T L  L    N 
Sbjct: 1153 LTALSKLNVHSCGLGTLPHSLTLLTDLTYLELGGNKLAEVDPNLFVQLTNLNSLWLYTNS 1212

Query: 196  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
            L  +P  I  L  L  L +  N++  +P  +    +L    +  N+L +LP ELG+L+ L
Sbjct: 1213 LKVLPPEIEHLQSLTELHMSVNQLRELPKELGKLTNLTHLDLSRNSLQSLPEELGELTNL 1272

Query: 256  GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
              + LH N+LK++ +   +L  L  LDL  N+++ LP  + ++T L              
Sbjct: 1273 RQILLHRNRLKQFPLFVTKLVSLERLDLDTNAITHLPESLSQLTNL-------------- 1318

Query: 315  SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN-LSAIP 373
                      LL   R+R+     +EA+  +          ++TS +    GMN L+A+P
Sbjct: 1319 ---------VLLDLNRNRI-----TEAAALR-------PACALTSLQALFVGMNGLTALP 1357

Query: 374  SEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFS 410
             EI    ++  L+L  N +  LPP L    +L+  ++
Sbjct: 1358 DEIGRLTQLESLNLIENRLTALPPALGQLTALKYVYA 1394



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 137/300 (45%), Gaps = 29/300 (9%)

Query: 45   VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA--AIGELHMLKSLDVSFNS 102
            V L++L L  N I  L E L  L  L +L+++ N+++E  A      L  L++L V  N 
Sbjct: 1293 VSLERLDLDTNAITHLPESLSQLTNLVLLDLNRNRITEAAALRPACALTSLQALFVGMNG 1352

Query: 103  IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
            +  +PDEIG  T L   +   N+L  LP +LG+   L    A  N +TS+P++L   + +
Sbjct: 1353 LTALPDEIGRLTQLESLNLIENRLTALPPALGQLTALKYVYACYNRLTSVPDELGGLTNL 1412

Query: 163  SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
              LD+  N+L  + +  +     L      KN L+ +P  +G L+ L RL L  N   + 
Sbjct: 1413 QSLDLSHNELRAVFD--VRRLARLEVFSVYKNCLSRVPPGLGQLTSLKRLWLGINAFHTE 1470

Query: 223  P-------SSISGCC------------SLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
            P       S+++               SL    M  N + ++P  L +L+ L  L L  N
Sbjct: 1471 PPPPMSELSTVAAATTTESIDEVAELRSLRVLNMRGNDIHSVPEALSRLTNLDVLSLWRN 1530

Query: 264  QLK-----EYCVEACQLRLSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            +L         V      L  L L  N+L   LP EIG +T LR L L  N + +L +SL
Sbjct: 1531 KLTGPRAIPSSVWQSLTGLRHLHLGENNLQEELPEEIGALTNLRALHLEKNGISSLPASL 1590



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 146/328 (44%), Gaps = 37/328 (11%)

Query: 26   NEVYKNFDE---AGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
            N V+ N DE       D+  +  +L  L L++N +  L + +  L  LT + ++ N+L  
Sbjct: 1057 NLVWLNLDENKLESLPDELGQLTNLTSLFLSYNRLTSLPDTMSRLTALTGVGLNANQLRS 1116

Query: 83   LP-----------------------------AAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            LP                             A +  L  L  L+V    +  +P  +   
Sbjct: 1117 LPDTWFANARNLRELYFWRNPMLGSLAPNVDAGMAGLTALSKLNVHSCGLGTLPHSLTLL 1176

Query: 114  TALVKFDCSSNQLKEL-PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            T L   +   N+L E+ P+   +  NL+      N +  LP ++     +++L +  N+L
Sbjct: 1177 TDLTYLELGGNKLAEVDPNLFVQLTNLNSLWLYTNSLKVLPPEIEHLQSLTELHMSVNQL 1236

Query: 173  TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
              L   L    T LT L  S+N L  +PE +G L+ L ++ LH+NR+   P  ++   SL
Sbjct: 1237 RELPKEL-GKLTNLTHLDLSRNSLQSLPEELGELTNLRQILLHRNRLKQFPLFVTKLVSL 1295

Query: 233  AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV--EACQL-RLSVLDLSNNSLSG 289
                +  NA++ LP  L +L+ L  LDL+ N++ E      AC L  L  L +  N L+ 
Sbjct: 1296 ERLDLDTNAITHLPESLSQLTNLVLLDLNRNRITEAAALRPACALTSLQALFVGMNGLTA 1355

Query: 290  LPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            LP EIG++T L  L L  N L  L  +L
Sbjct: 1356 LPDEIGRLTQLESLNLIENRLTALPPAL 1383



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 129/313 (41%), Gaps = 52/313 (16%)

Query: 47   LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
            L+ L L  N +  L   L  L  L  +   +N+L+ +P  +G L  L+SLD+S N +  +
Sbjct: 1366 LESLNLIENRLTALPPALGQLTALKYVYACYNRLTSVPDELGGLTNLQSLDLSHNELRAV 1425

Query: 107  PDEIGSATALVKFDCSSNQLKELPSSLGR-------CLNLSDFKAS-------------- 145
             D +     L  F    N L  +P  LG+        L ++ F                 
Sbjct: 1426 FD-VRRLARLEVFSVYKNCLSRVPPGLGQLTSLKRLWLGINAFHTEPPPPMSELSTVAAA 1484

Query: 146  ---------------------NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
                                  N I S+PE L+  + +  L +  NKLT       + W 
Sbjct: 1485 TTTESIDEVAELRSLRVLNMRGNDIHSVPEALSRLTNLDVLSLWRNKLTGPRAIPSSVWQ 1544

Query: 185  MLTEL----IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
             LT L    +   NL   +PE IG+L+ L  L L +N I S+P+S+S    L    +  N
Sbjct: 1545 SLTGLRHLHLGENNLQEELPEEIGALTNLRALHLEKNGISSLPASLSRLTRLGHLNISAN 1604

Query: 241  AL-SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIG 295
                ALP  +  ++ L TLD+  N+    C +        +L VL+  NN L  LP E+ 
Sbjct: 1605 RFEGALPPIVLAITSLTTLDIACNRFTRLCDDDQAFGRLTKLRVLNAGNNRLEALPDELW 1664

Query: 296  KMTTLRKLLLTGN 308
            ++  +R + + GN
Sbjct: 1665 RLPRVRCVQIKGN 1677



 Score = 41.6 bits (96), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 1/88 (1%)

Query: 231  SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
            ++   +M  N+L+ALP  +   + L  LDL  N+L        +L+ L  L+L  N L  
Sbjct: 1011 TMTYLWMNENSLTALPPPVLLFTNLIELDLKHNRLTSLPPAISRLQNLVWLNLDENKLES 1070

Query: 290  LPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            LP E+G++T L  L L+ N L +L  ++
Sbjct: 1071 LPDELGQLTNLTSLFLSYNRLTSLPDTM 1098


>gi|20091139|ref|NP_617214.1| hypothetical protein MA2301 [Methanosarcina acetivorans C2A]
 gi|19916243|gb|AAM05694.1| hypothetical protein MA_2301 [Methanosarcina acetivorans C2A]
          Length = 631

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 147/273 (53%), Gaps = 3/273 (1%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT L++S N+L++LP+ I EL  L +L++S N + ++P EIG   +L  FD S NQL +L
Sbjct: 18  LTTLDLSENQLTQLPSEITELKNLTTLNLSGNQLTQLPSEIGELKSLTSFDLSVNQLTQL 77

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G   NL+      N +  L  ++ +   ++ LD+  NKLT L    I     L  L
Sbjct: 78  PPEIGELKNLTILNVYRNQLIQLLPEITELKNLTTLDLSLNKLTQLPPE-IGELNNLKTL 136

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
            +S N L  +P  I  L  L  L L  N ++ +P  I+   +L    +  N L  LP+++
Sbjct: 137 YSSSNQLTQLPLEITKLKNLTELYLSSNLMIRLPLEITELKNLTTLNVYRNQLIQLPSKI 196

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            +L  L  LDL  NQL +   E  +L+ L+ LDLS N L+ LPPEI ++  L  L L  N
Sbjct: 197 TELKNLKKLDLSRNQLAQLPPEIAELKNLTTLDLSRNQLAQLPPEIAELKNLTTLDLFEN 256

Query: 309 PLRTLRSSLVNGPTPALLKYLR-SRLPENEDSE 340
           PL +L   +V+    A+  YL+ S+  EN +++
Sbjct: 257 PLISLPPEIVSQGVKAIFTYLKQSKTTENNEAK 289



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/250 (36%), Positives = 137/250 (54%), Gaps = 2/250 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L+ N + +L  ++  L  LT LN+S N+L++LP+ IGEL  L S D+S N + +
Sbjct: 17  NLTTLDLSENQLTQLPSEITELKNLTTLNLSGNQLTQLPSEIGELKSLTSFDLSVNQLTQ 76

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +   NQL +L   +    NL+    S N +T LP ++ + + +  L
Sbjct: 77  LPPEIGELKNLTILNVYRNQLIQLLPEITELKNLTTLDLSLNKLTQLPPEIGELNNLKTL 136

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
               N+LT L    I     LTEL  S NL+  +P  I  L  L  L++++N+++ +PS 
Sbjct: 137 YSSSNQLTQLPLE-ITKLKNLTELYLSSNLMIRLPLEITELKNLTTLNVYRNQLIQLPSK 195

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I+   +L +  +  N L+ LP E+ +L  L TLDL  NQL +   E  +L+ L+ LDL  
Sbjct: 196 ITELKNLKKLDLSRNQLAQLPPEIAELKNLTTLDLSRNQLAQLPPEIAELKNLTTLDLFE 255

Query: 285 NSLSGLPPEI 294
           N L  LPPEI
Sbjct: 256 NPLISLPPEI 265



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/231 (35%), Positives = 123/231 (53%), Gaps = 11/231 (4%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           LT L  S+N L  +P  I  L  L  L+L  N++  +PS I    SL  F +  N L+ L
Sbjct: 18  LTTLDLSENQLTQLPSEITELKNLTTLNLSGNQLTQLPSEIGELKSLTSFDLSVNQLTQL 77

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P E+G+L  L  L+++ NQL +   E  +L+ L+ LDLS N L+ LPPEIG++  L+ L 
Sbjct: 78  PPEIGELKNLTILNVYRNQLIQLLPEITELKNLTTLDLSLNKLTQLPPEIGELNNLKTLY 137

Query: 305 LTGNPLRTLR---SSLVNGPTPALLKYLRSRLP-ENEDSEASTT----KEDLITMATRLS 356
            + N L  L    + L N     L   L  RLP E  + +  TT    +  LI + ++++
Sbjct: 138 SSSNQLTQLPLEITKLKNLTELYLSSNLMIRLPLEITELKNLTTLNVYRNQLIQLPSKIT 197

Query: 357 VTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                K+L L    L+ +P EI E   +T LDLSRN + +LPPE++   +L
Sbjct: 198 ELKNLKKLDLSRNQLAQLPPEIAELKNLTTLDLSRNQLAQLPPEIAELKNL 248



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 118/253 (46%), Gaps = 37/253 (14%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS   L  +P+E+              E   L    L+ N + +L  ++  L  LT+
Sbjct: 43  TLNLSGNQLTQLPSEI-------------GELKSLTSFDLSVNQLTQLPPEIGELKNLTI 89

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LNV  N+L +L   I EL  L +LD+S N + ++P EIG    L     SSNQL +LP  
Sbjct: 90  LNVYRNQLIQLLPEITELKNLTTLDLSLNKLTQLPPEIGELNNLKTLYSSSNQLTQLPLE 149

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +  NL++   S+N +  LP ++ +   ++ L+V  N+L  L                 
Sbjct: 150 ITKLKNLTELYLSSNLMIRLPLEITELKNLTTLNVYRNQLIQL----------------- 192

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P  I  L  L +LDL +N++  +P  I+   +L    +  N L+ LP E+ +L
Sbjct: 193 -------PSKITELKNLKKLDLSRNQLAQLPPEIAELKNLTTLDLSRNQLAQLPPEIAEL 245

Query: 253 SKLGTLDLHSNQL 265
             L TLDL  N L
Sbjct: 246 KNLTTLDLFENPL 258



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 72/140 (51%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L+ L  + N + +L  ++  L  LT L +S N +  LP  I EL  L +L+V  N 
Sbjct: 129 ELNNLKTLYSSSNQLTQLPLEITKLKNLTELYLSSNLMIRLPLEITELKNLTTLNVYRNQ 188

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           ++++P +I     L K D S NQL +LP  +    NL+    S N +  LP ++A+   +
Sbjct: 189 LIQLPSKITELKNLKKLDLSRNQLAQLPPEIAELKNLTTLDLSRNQLAQLPPEIAELKNL 248

Query: 163 SKLDVEGNKLTVLSNNLIAS 182
           + LD+  N L  L   +++ 
Sbjct: 249 TTLDLFENPLISLPPEIVSQ 268



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 13/140 (9%)

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
           EA +  L+ LDLS N L+ LP EI ++  L  L L+GN L  L S +  G   +L  +  
Sbjct: 12  EAYEKNLTTLDLSENQLTQLPSEITELKNLTTLNLSGNQLTQLPSEI--GELKSLTSF-- 67

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L  N+ ++      +L  + T L+V   +L      +  +P EI E   +T LDLS N
Sbjct: 68  -DLSVNQLTQLPPEIGELKNL-TILNVYRNQL------IQLLP-EITELKNLTTLDLSLN 118

Query: 391 SIQELPPELSSCASLQVKFS 410
            + +LPPE+    +L+  +S
Sbjct: 119 KLTQLPPEIGELNNLKTLYS 138


>gi|291231680|ref|XP_002735791.1| PREDICTED: leucine rich repeat containing 7-like [Saccoglossus
           kowalevskii]
          Length = 839

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 201/423 (47%), Gaps = 28/423 (6%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK----------NFDEAGEGDKWWEAVDLQKLILA 53
           ++K++     +NLS + L  +P +V+           N +      +    V+L+ L++ 
Sbjct: 118 MIKSSNGKYCVNLSGQCLHRIPKQVFNLEQLQCLFISNNNITYIPPEISNLVNLEVLMIQ 177

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +NNIE L +D+ +L  L VL +S+N+L+ +P  IG+L  LK L ++ N +  IP E+G  
Sbjct: 178 NNNIESLPKDIGSLTKLEVLELSYNELTSIPKEIGQLEKLKQLYLNHNKLESIPKEMGKL 237

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           + L     SSNQL  LPS +     L++   +NN +  +P+ +    ++ KL + GN L 
Sbjct: 238 SELTVLGLSSNQLTSLPSEISLMKQLTNLGLNNNSLGCIPKSICYLEQLIKLGLSGNNLQ 297

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L  ++I +W  L +L  S N +  +P  I  +  L  L+L  N+I  I   I     L 
Sbjct: 298 TLP-SVIENWIELCDLQLSDNQIQYLPIQIYWIPNLEELNLSNNKIQDISCEIIKLTKLR 356

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPP 292
              + NNAL  LP E+ +L  L  L +  N+LKE     C  L L  +  SNN L  +P 
Sbjct: 357 ILGLNNNALERLPDEICQLPNLELLGVDGNKLKEIPDLVCNLLALKEIYFSNNCLESVPD 416

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           ++  ++ +  L L GN ++TL   + N    + L    ++L             D   + 
Sbjct: 417 DVCLLSDVEILFLGGNAMKTLPIEITNMKRLSHLTLDNNQL-------------DHFPLG 463

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP---PELSSCASLQVKF 409
                  + L+++  +++ IP+EI     +  L LS N IQ  P     L S  +L V  
Sbjct: 464 LCSLAEVQVLNIDDNDITHIPAEIENMSHLQHLTLSNNKIQTFPLGICRLESLKTLDVSG 523

Query: 410 SDL 412
           +DL
Sbjct: 524 NDL 526



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 169/377 (44%), Gaps = 20/377 (5%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           + W E  DLQ   L+ N I+ L   +  +P L  LN+S+NK+ ++   I +L  L+ L +
Sbjct: 304 ENWIELCDLQ---LSDNQIQYLPIQIYWIPNLEELNLSNNKIQDISCEIIKLTKLRILGL 360

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           + N++ ++PDEI     L       N+LKE+P  +   L L +   SNNC+ S+P+D+  
Sbjct: 361 NNNALERLPDEICQLPNLELLGVDGNKLKEIPDLVCNLLALKEIYFSNNCLESVPDDVCL 420

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
            S +  L + GN +  L    I +   L+ L    N L+  P  + SL+ +  L++  N 
Sbjct: 421 LSDVEILFLGGNAMKTLPIE-ITNMKRLSHLTLDNNQLDHFPLGLCSLAEVQVLNIDDND 479

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           I  IP+ I     L    + NN +   P  + +L  L TLD+  N L+E   E  +L  L
Sbjct: 480 ITHIPAEIENMSHLQHLTLSNNKIQTFPLGICRLESLKTLDVSGNDLRELPTEIKKLINL 539

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS-------------LVNGPTPA 324
             L L+ N     P  + ++ +L KL L GN + ++  S             L +   P 
Sbjct: 540 KELFLNQNKFEVFPAVVCRLHSLEKLHLCGNGMVSVEESTELHHLKSLQEMHLSDNKFPH 599

Query: 325 LLKYL--RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
               L   S L      +    K  L+       V  +EL ++   L  +P  I    ++
Sbjct: 600 FPNELCVISNLKTLHFDQKFGCKVRLLPECIAELVNLEELYVDNNALETLPVMIGALAKL 659

Query: 383 TKLDLSRNSIQELPPEL 399
            KL +  N+I  LP  L
Sbjct: 660 QKLSVCCNNITHLPESL 676



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 132/298 (44%), Gaps = 5/298 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L +N ++     L +L  + VLN+  N ++ +PA I  +  L+ L +S N I   
Sbjct: 447 LSHLTLDNNQLDHFPLGLCSLAEVQVLNIDDNDITHIPAEIENMSHLQHLTLSNNKIQTF 506

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  I    +L   D S N L+ELP+ + + +NL +   + N     P  +     + KL 
Sbjct: 507 PLGICRLESLKTLDVSGNDLRELPTEIKKLINLKELFLNQNKFEVFPAVVCRLHSLEKLH 566

Query: 167 VEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN---RILSI 222
           + GN + +V  +  +     L E+  S N     P  +  +S L  L   Q    ++  +
Sbjct: 567 LCGNGMVSVEESTELHHLKSLQEMHLSDNKFPHFPNELCVISNLKTLHFDQKFGCKVRLL 626

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P  I+   +L E Y+ NNAL  LP  +G L+KL  L +  N +       C L+ L+ L 
Sbjct: 627 PECIAELVNLEELYVDNNALETLPVMIGALAKLQKLSVCCNNITHLPESLCMLQNLTSLH 686

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L +N L  LP     +  +  L L  NPL      + +G     + Y   R  E E++
Sbjct: 687 LESNQLMKLPVRFDNLINIADLRLEFNPLMHPPKDVCDGGILQPIAYFMQRAEEREEA 744



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 167/385 (43%), Gaps = 34/385 (8%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAG-EGDKWWEAVDL-------QKLILAHNNIEKLKED 63
           L L+N +L  +P+E+ +  N +  G +G+K  E  DL       +++  ++N +E + +D
Sbjct: 358 LGLNNNALERLPDEICQLPNLELLGVDGNKLKEIPDLVCNLLALKEIYFSNNCLESVPDD 417

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  + +L +  N +  LP  I  +  L  L +  N +   P  + S   +   +   
Sbjct: 418 VCLLSDVEILFLGGNAMKTLPIEITNMKRLSHLTLDNNQLDHFPLGLCSLAEVQVLNIDD 477

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N +  +P+ +    +L     SNN I + P  +     +  LDV GN L  L    I   
Sbjct: 478 NDITHIPAEIENMSHLQHLTLSNNKIQTFPLGICRLESLKTLDVSGNDLRELPTE-IKKL 536

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS--ISGCCSLAEFYMGNNA 241
             L EL  ++N     P  +  L  L +L L  N ++S+  S  +    SL E ++ +N 
Sbjct: 537 INLKELFLNQNKFEVFPAVVCRLHSLEKLHLCGNGMVSVEESTELHHLKSLQEMHLSDNK 596

Query: 242 LSALPAELGKLSKLGTLDLHSN-----QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 296
               P EL  +S L TL          +L   C+ A  + L  L + NN+L  LP  IG 
Sbjct: 597 FPHFPNELCVISNLKTLHFDQKFGCKVRLLPECI-AELVNLEELYVDNNALETLPVMIGA 655

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRL 355
           +  L+KL +  N +  L  SL       +L+ L S  L  N+  +     ++LI +A   
Sbjct: 656 LAKLQKLSVCCNNITHLPESL------CMLQNLTSLHLESNQLMKLPVRFDNLINIA--- 706

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAG 380
                +L LE   L   P ++ + G
Sbjct: 707 -----DLRLEFNPLMHPPKDVCDGG 726


>gi|195443980|ref|XP_002069663.1| GK11454 [Drosophila willistoni]
 gi|261277889|sp|B4N9T4.1|SUR8_DROWI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194165748|gb|EDW80649.1| GK11454 [Drosophila willistoni]
          Length = 641

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 191/397 (48%), Gaps = 30/397 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 234 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITTVADDLRQLVNLTML 280

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 281 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N +TS+P  L +C  M + +VEGN +T L + ++AS   LT +  S+
Sbjct: 341 GNLKSLVRLGLRYNRLTSVPASLKNCKSMDEFNVEGNGITQLPDGMLASLNGLTIITLSR 400

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P       + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G 
Sbjct: 401 NQFTSYPTGGPAQFTNVYNINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGT 460

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N +
Sbjct: 461 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRI 520

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +       LL  L+  + +             ++  T LSV+         NL 
Sbjct: 521 EVLPHEI------GLLHELQRLILQTNQITMLPRSIGHLSQLTHLSVSEN-------NLQ 567

Query: 371 AIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQ 406
            +P EI     +  L +++N  +++LP EL+ C +L+
Sbjct: 568 FLPEEIGSLESLENLYINQNPGLEKLPFELALCQNLK 604



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 206/453 (45%), Gaps = 73/453 (16%)

Query: 3   RILKAARTSG--SLNLSNRSLRDVPN---------EVYKNFDEAGE-GDKWWEAVDLQKL 50
           + L+  R  G   L+LS  S+  +PN         E+Y   ++ G+   +    V+L+ L
Sbjct: 152 KALQRCRDEGIKRLDLSKSSITVIPNTVKECVHLTELYLYSNKIGQLPTEIGCLVNLRNL 211

Query: 51  ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI 110
            L  N++  L + L++   L VL++ HNKL+E+P  I  L  L +L + FN I  + D++
Sbjct: 212 ALNENSLTSLPDSLQHCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITTVADDL 271

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
                L       N+++EL S++G  +NL+    S+N +  LPED+ +C  +S LD++ N
Sbjct: 272 RQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHN 331

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +L                          +P++IG+L  L+RL L  NR+ S+P+S+  C 
Sbjct: 332 ELL------------------------DIPDSIGNLKSLVRLGLRYNRLTSVPASLKNCK 367

Query: 231 SLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVEA-CQLR------------ 276
           S+ EF +  N ++ LP   L  L+ L  + L  NQ   Y      Q              
Sbjct: 368 SMDEFNVEGNGITQLPDGMLASLNGLTIITLSRNQFTSYPTGGPAQFTNVYNINLEHNRI 427

Query: 277 -------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
                        L+ L++  N L+ LP +IG    + +L L  N L+ L   ++N    
Sbjct: 428 DKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNL 487

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITM-ATRLSVTSKELS---------LEGMNLSAIP 373
            +L    + L +  ++  +  K  ++ +   R+ V   E+          L+   ++ +P
Sbjct: 488 EILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLP 547

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             I    ++T L +S N++Q LP E+ S  SL+
Sbjct: 548 RSIGHLSQLTHLSVSENNLQFLPEEIGSLESLE 580



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 171/365 (46%), Gaps = 41/365 (11%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           +++L L+ ++I  +   ++    LT L +  NK+ +LP  IG L  L++L ++ NS+  +
Sbjct: 162 IKRLDLSKSSITVIPNTVKECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSL 221

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +     L   D   N+L E+P  + R  +L+      N IT++ +DL     ++ L 
Sbjct: 222 PDSLQHCNQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITTVADDLRQLVNLTMLS 281

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK+  L +  I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI
Sbjct: 282 LRENKIRELGS-AIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 340

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN---QLKEYCVEACQLRLSVLDLS 283
               SL    +  N L+++PA L     +   ++  N   QL +  + +    L+++ LS
Sbjct: 341 GNLKSLVRLGLRYNRLTSVPASLKNCKSMDEFNVEGNGITQLPDGMLASLN-GLTIITLS 399

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEAS 342
            N  +  P              TG P +      +N      L++ R  ++P    S A 
Sbjct: 400 RNQFTSYP--------------TGGPAQFTNVYNIN------LEHNRIDKIPYGIFSRAK 439

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                     T+L++       E M L+A+P +I     + +L+L+ N++Q+LP ++ + 
Sbjct: 440 G--------LTKLNMK------ENM-LTALPLDIGTWVNMVELNLATNALQKLPDDIMNL 484

Query: 403 ASLQV 407
            +L++
Sbjct: 485 QNLEI 489


>gi|220907479|ref|YP_002482790.1| hypothetical protein Cyan7425_2066 [Cyanothece sp. PCC 7425]
 gi|219864090|gb|ACL44429.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 508

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 179/364 (49%), Gaps = 30/364 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L++N    L   + NL  L  L++S N  ++LP AI  L  L  LD+S+N + 
Sbjct: 156 VHLKELDLSNNAFTDLPVAIANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDLSYNKLT 215

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            IP  I S + L   D  +NQ+ ELP  +G C+ L +   S N + +L   +   + +  
Sbjct: 216 AIPAVISSLSQLQTLDLCANQITELPELIGSCIELQELSLSRNLLINLSAAIGSLTNLKV 275

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N+L+ L  + I   T L +L   +N L  +PE+IG LS L    L++N++  +P 
Sbjct: 276 LDLSQNQLSHLPKS-IGYLTQLQKLYIERNKLITLPESIGGLSNLQTFHLYRNQLTILPE 334

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK---EYCVEACQ-----LR 276
           SI     L E +   N L+ LP  +  L++L  L+L  NQL    E     C+     L+
Sbjct: 335 SIGDLIQLRELFAYQNQLTNLPGTIRFLTRLEKLNLSGNQLATLPEGLTVLCEALSSLLQ 394

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR----SR 332
           L  L+LS+N ++ LP  IG +T L++L+L  N L+ L +S +   T     Y+     + 
Sbjct: 395 LHYLNLSHNQIAQLPEAIGALTQLKELVLVCNHLKDLPAS-IGSLTQLQFLYVSHNPLTH 453

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
           LPE  +  +   K                L+LE  +LS +P+ I     + +L LS N  
Sbjct: 454 LPETINGLSQLQK----------------LNLEHNHLSDLPAAIAALTLLKELILSENKF 497

Query: 393 QELP 396
             LP
Sbjct: 498 TVLP 501



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 135/411 (32%), Positives = 193/411 (46%), Gaps = 51/411 (12%)

Query: 40  KWWEAVDLQ--KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           +  EA  LQ  +L L +  + +L   +  L  L  L++S+N L+ LP  I  L  L+ LD
Sbjct: 11  RIEEAWQLQATELTLRNLGLTELPTTIGTLTQLQKLDLSNNYLTTLPEEISALTQLRDLD 70

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           +  NS+  +P  I S T L   D   NQL  LP ++     L     SNN  TSLP  + 
Sbjct: 71  LFSNSLSALPLGICSLTQLEVLDLIENQLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIG 130

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           D +++  L +  NKLT L    I     L EL  S N    +P  I +L++L  LDL +N
Sbjct: 131 DLAQLQVLGLHANKLTKLPAE-IGCLVHLKELDLSNNAFTDLPVAIANLNQLQTLDLSRN 189

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY------CVE 271
               +P +I+G   L +  +  N L+A+PA +  LS+L TLDL +NQ+ E       C+E
Sbjct: 190 HFTDLPEAINGLAHLCKLDLSYNKLTAIPAVISSLSQLQTLDLCANQITELPELIGSCIE 249

Query: 272 ACQLRLS------------------VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
             +L LS                  VLDLS N LS LP  IG +T L+KL +  N L TL
Sbjct: 250 LQELSLSRNLLINLSAAIGSLTNLKVLDLSQNQLSHLPKSIGYLTQLQKLYIERNKLITL 309

Query: 314 RSS---LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             S   L N  T  L +   + LPE        +  DLI +        +EL      L+
Sbjct: 310 PESIGGLSNLQTFHLYRNQLTILPE--------SIGDLIQL--------RELFAYQNQLT 353

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSS-CAS----LQVKFSDLVTNK 416
            +P  I     + KL+LS N +  LP  L+  C +    LQ+ + +L  N+
Sbjct: 354 NLPGTIRFLTRLEKLNLSGNQLATLPEGLTVLCEALSSLLQLHYLNLSHNQ 404



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 134/431 (31%), Positives = 197/431 (45%), Gaps = 49/431 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAV-----------DLQKLILAHNNIEKLKE 62
           L+LSN  L  +P E+     +  + D +  ++            L+ L L  N +  L E
Sbjct: 46  LDLSNNYLTTLPEEI-SALTQLRDLDLFSNSLSALPLGICSLTQLEVLDLIENQLTNLPE 104

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
            +  L  L  L++S+N  + LP  IG+L  L+ L +  N + K+P EIG    L + D S
Sbjct: 105 AISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKLTKLPAEIGCLVHLKELDLS 164

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT----VLSN- 177
           +N   +LP ++     L     S N  T LPE +   + + KLD+  NKLT    V+S+ 
Sbjct: 165 NNAFTDLPVAIANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDLSYNKLTAIPAVISSL 224

Query: 178 -----------------NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
                             LI S   L EL  S+NLL  +   IGSL+ L  LDL QN++ 
Sbjct: 225 SQLQTLDLCANQITELPELIGSCIELQELSLSRNLLINLSAAIGSLTNLKVLDLSQNQLS 284

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK---EYCVEACQLRL 277
            +P SI     L + Y+  N L  LP  +G LS L T  L+ NQL    E   +  QLR 
Sbjct: 285 HLPKSIGYLTQLQKLYIERNKLITLPESIGGLSNLQTFHLYRNQLTILPESIGDLIQLR- 343

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL--VNGPTPALLKYLRSRLPE 335
             L    N L+ LP  I  +T L KL L+GN L TL   L  +     +LL+     L  
Sbjct: 344 -ELFAYQNQLTNLPGTIRFLTRLEKLNLSGNQLATLPEGLTVLCEALSSLLQLHYLNLSH 402

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           N+ ++      + I   T+L    KEL L   +L  +P+ I    ++  L +S N +  L
Sbjct: 403 NQIAQLP----EAIGALTQL----KELVLVCNHLKDLPASIGSLTQLQFLYVSHNPLTHL 454

Query: 396 PPELSSCASLQ 406
           P  ++  + LQ
Sbjct: 455 PETINGLSQLQ 465



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 137/261 (52%), Gaps = 7/261 (2%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++LQ+L L+ N +  L   + +L  L VL++S N+LS LP +IG L  L+ L +  N ++
Sbjct: 248 IELQELSLSRNLLINLSAAIGSLTNLKVLDLSQNQLSHLPKSIGYLTQLQKLYIERNKLI 307

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+ IG  + L  F    NQL  LP S+G  + L +  A  N +T+LP  +   +++ K
Sbjct: 308 TLPESIGGLSNLQTFHLYRNQLTILPESIGDLIQLRELFAYQNQLTNLPGTIRFLTRLEK 367

Query: 165 LDVEGNKLTVLSNNL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
           L++ GN+L  L   L      ++S   L  L  S N +  +PE IG+L++L  L L  N 
Sbjct: 368 LNLSGNQLATLPEGLTVLCEALSSLLQLHYLNLSHNQIAQLPEAIGALTQLKELVLVCNH 427

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           +  +P+SI     L   Y+ +N L+ LP  +  LS+L  L+L  N L +       L  L
Sbjct: 428 LKDLPASIGSLTQLQFLYVSHNPLTHLPETINGLSQLQKLNLEHNHLSDLPAAIAALTLL 487

Query: 278 SVLDLSNNSLSGLPPEIGKMT 298
             L LS N  + LP  IG +T
Sbjct: 488 KELILSENKFTVLPTAIGALT 508


>gi|260788668|ref|XP_002589371.1| hypothetical protein BRAFLDRAFT_218147 [Branchiostoma floridae]
 gi|229274548|gb|EEN45382.1| hypothetical protein BRAFLDRAFT_218147 [Branchiostoma floridae]
          Length = 310

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 144/304 (47%), Gaps = 24/304 (7%)

Query: 38  GDKWWEAVD-LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           G      VD L  L L++  +  + E++ ++  L  +NVSHNKL+ +P AIG L  L  L
Sbjct: 4   GLNLQRTVDGLLYLNLSNQGLTSIPEEVFDITDLESINVSHNKLTSIPEAIGRLQKLSRL 63

Query: 97  DVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           D   N +  +P  IG+   L       N+L +LP+ +   LNL    A NN +++ P  +
Sbjct: 64  DAGGNKLTSLPQAIGTLPKLTHLYVYDNKLTKLPTGVCLLLNLEVLSAFNNNLSTFPPGV 123

Query: 157 ADCSKMSKLDVEGNKLTVLSNNL----------------------IASWTMLTELIASKN 194
               K+ +L V  N+LT +   +                      +   T L +L  S N
Sbjct: 124 EKLQKLRELYVYDNQLTEVPPGVCSLPNLEVLSVGRNPIRRLPDDVTRLTRLKDLNVSDN 183

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +PE IG L +L RLD H N + S+P  I     L   Y+ +N L+ LP  + KL K
Sbjct: 184 KLTSIPEAIGRLQKLYRLDAHGNMLTSLPQEIGSLQKLTHLYVHSNKLANLPPGIEKLQK 243

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L +  NQL E     C L  L VL + NN LS  PP + K+  LR+L + GN L  +
Sbjct: 244 LRQLYICGNQLTEVPSGVCSLPNLEVLHVGNNKLSTFPPGVEKLQKLRELYIYGNQLTEV 303

Query: 314 RSSL 317
            S +
Sbjct: 304 PSGV 307



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 132/312 (42%), Gaps = 38/312 (12%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           L++S   +  IP+E+   T L   + S N+L  +P ++GR   LS   A  N +TSLP+ 
Sbjct: 17  LNLSNQGLTSIPEEVFDITDLESINVSHNKLTSIPEAIGRLQKLSRLDAGGNKLTSLPQA 76

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           +    K++ L V  NKLT L    +     L  L A  N L+  P  +  L +L  L ++
Sbjct: 77  IGTLPKLTHLYVYDNKLTKLPTG-VCLLLNLEVLSAFNNNLSTFPPGVEKLQKLRELYVY 135

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N++  +P  +    +L    +G N +  LP ++ +L++L  L++  N+L        +L
Sbjct: 136 DNQLTEVPPGVCSLPNLEVLSVGRNPIRRLPDDVTRLTRLKDLNVSDNKLTSIPEAIGRL 195

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            +L  LD   N L+ LP EIG +  L  L +  N L  L         P + K  + R  
Sbjct: 196 QKLYRLDAHGNMLTSLPQEIGSLQKLTHLYVHSNKLANL--------PPGIEKLQKLR-- 245

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                                     +L + G  L+ +PS +     +  L +  N +  
Sbjct: 246 --------------------------QLYICGNQLTEVPSGVCSLPNLEVLHVGNNKLST 279

Query: 395 LPPELSSCASLQ 406
            PP +     L+
Sbjct: 280 FPPGVEKLQKLR 291



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 80/187 (42%), Gaps = 27/187 (14%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L +  N I +L +D+  L  L  LNVS NKL+ +P AIG L  L  LD   N +  
Sbjct: 151 NLEVLSVGRNPIRRLPDDVTRLTRLKDLNVSDNKLTSIPEAIGRLQKLYRLDAHGNMLTS 210

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIGS   L      SN+L  LP  + +   L       N +T +P  +     +  L
Sbjct: 211 LPQEIGSLQKLTHLYVHSNKLANLPPGIEKLQKLRQLYICGNQLTEVPSGVCSLPNLEVL 270

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V  NKL+                          P  +  L +L  L ++ N++  +P  
Sbjct: 271 HVGNNKLST------------------------FPPGVEKLQKLRELYIYGNQLTEVP-- 304

Query: 226 ISGCCSL 232
            SG CSL
Sbjct: 305 -SGVCSL 310


>gi|360042765|emb|CCD78175.1| putative shoc2 [Schistosoma mansoni]
          Length = 542

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 162/300 (54%), Gaps = 28/300 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIM 104
           +L+ L+L +N +  + ++++ L  L+VL VS N +  +LP++IGEL  L  LD+SFN I 
Sbjct: 203 NLEHLLLTYNKLTHIVDEIKYLKRLSVLVVSRNLIRQDLPSSIGELTKLVKLDLSFNHIT 262

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PD IG  T+L   +   NQL +LP S+G  +NL       N +  +P  LA+C K+ +
Sbjct: 263 FLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLDE 322

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNL------------------------LNGMP 200
            +VE N+L+ L NNL+     L  +  S+N                         +  +P
Sbjct: 323 FNVENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGDPQQFQMCYTINMDHNEITNIP 382

Query: 201 ETIGSL-SRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +++ SL S LI+L+L  N + S I   +    +L E  +G+N LS LP E+ KL  L  L
Sbjct: 383 KSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELPTEINKLVALEVL 442

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L+ NQL     E  QL +L +LDL +N L  LP ++  +T+L++L +  N L+T  +S+
Sbjct: 443 RLNYNQLTSLPDEITQLSKLRILDLESNLLESLPNDLSGLTSLQELNVLCNRLKTFPASI 502



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 184/403 (45%), Gaps = 57/403 (14%)

Query: 24  VPNEVYKNF----DEAGEGDKWW-------EAVDLQKLILAHN--NIEKLKEDLRNLPLL 70
           +PN ++K+     D    G+K            +L++L+L  N      +  ++  L  L
Sbjct: 121 IPNAIFKDLSFIKDLFLYGNKLTTLPSSISHLTNLKRLLLQQNWLTASGIPNEITKLTNL 180

Query: 71  TVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE- 128
             L++ +N+L   LP  I  L+ L+ L +++N +  I DEI     L     S N +++ 
Sbjct: 181 EQLDLRYNRLDGPLPTCICGLYNLEHLLLTYNKLTHIVDEIKYLKRLSVLVVSRNLIRQD 240

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LPSS+G    L     S N IT LP+ +  C+ +  L+++ N+LT L             
Sbjct: 241 LPSSIGELTKLVKLDLSFNHITFLPDSIGKCTSLRDLNLQHNQLTKL------------- 287

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
                      P++IG+L  L RL +  N+++ IP+S++ C  L EF + NN LS+LP  
Sbjct: 288 -----------PDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLDEFNVENNQLSSLPNN 336

Query: 249 LGK-LSKLGTLDLHSNQLKEY-CVEACQLRL-SVLDLSNNSLSGLPPEIGKMTT-LRKLL 304
           L   L  L  + L  N    +   +  Q ++   +++ +N ++ +P  +  + + L KL 
Sbjct: 337 LLPCLHNLLNITLSRNYFTNFPSGDPQQFQMCYTINMDHNEITNIPKSVFSLASNLIKLN 396

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELS 363
           L  N L +L      GP    LK L    L  N  SE  T    L+ +          L 
Sbjct: 397 LRDNALDSLI-----GPDLHELKTLVELDLGSNRLSELPTEINKLVALEV--------LR 443

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L    L+++P EI +  ++  LDL  N ++ LP +LS   SLQ
Sbjct: 444 LNYNQLTSLPDEITQLSKLRILDLESNLLESLPNDLSGLTSLQ 486



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 162/349 (46%), Gaps = 38/349 (10%)

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN--SIMKIPDEIGSATALVKFDC 121
            ++L  +  L +  NKL+ LP++I  L  LK L +  N  +   IP+EI   T L + D 
Sbjct: 126 FKDLSFIKDLFLYGNKLTTLPSSISHLTNLKRLLLQQNWLTASGIPNEITKLTNLEQLDL 185

Query: 122 SSNQLK-ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
             N+L   LP+ +    NL     + N +T + +++    ++S L        V+S NLI
Sbjct: 186 RYNRLDGPLPTCICGLYNLEHLLLTYNKLTHIVDEIKYLKRLSVL--------VVSRNLI 237

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                             +P +IG L++L++LDL  N I  +P SI  C SL +  + +N
Sbjct: 238 RQ---------------DLPSSIGELTKLVKLDLSFNHITFLPDSIGKCTSLRDLNLQHN 282

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
            L+ LP  +G L  L  L +  NQL E     A  ++L   ++ NN LS LP  +  +  
Sbjct: 283 QLTKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLDEFNVENNQLSSLPNNL--LPC 340

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  LL     +   R+   N P+    ++        + +E +   + + ++A+ L    
Sbjct: 341 LHNLL----NITLSRNYFTNFPSGDPQQFQMCYTINMDHNEITNIPKSVFSLASNLI--- 393

Query: 360 KELSLEGMNL-SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +L+L    L S I  ++ E   + +LDL  N + ELP E++   +L+V
Sbjct: 394 -KLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELPTEINKLVALEV 441



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 127/278 (45%), Gaps = 49/278 (17%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L KL L+ N+I  L + +     L  LN+ HN+L++LP +IG L  L  L + +N 
Sbjct: 247 ELTKLVKLDLSFNHITFLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQ 306

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLP----EDLA 157
           +++IP  + +   L +F+  +NQL  LP++L  CL NL +   S N  T+ P    +   
Sbjct: 307 LVEIPASLANCVKLDEFNVENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGDPQQFQ 366

Query: 158 DC---------------------SKMSKLDVEGNKLTVL-----------------SNNL 179
            C                     S + KL++  N L  L                 SN L
Sbjct: 367 MCYTINMDHNEITNIPKSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDLGSNRL 426

Query: 180 IASWTMLTELIA------SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
               T + +L+A      + N L  +P+ I  LS+L  LDL  N + S+P+ +SG  SL 
Sbjct: 427 SELPTEINKLVALEVLRLNYNQLTSLPDEITQLSKLRILDLESNLLESLPNDLSGLTSLQ 486

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           E  +  N L   PA +G+L+KL  +    N + +  VE
Sbjct: 487 ELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIPVE 524



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 30/191 (15%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAI----GELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
           D +   +   +N+ HN+++ +P ++      L  L   D + +S++  PD +     LV+
Sbjct: 361 DPQQFQMCYTINMDHNEITNIPKSVFSLASNLIKLNLRDNALDSLIG-PD-LHELKTLVE 418

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D  SN+L ELP+ + + + L   + + N +TSLP+++   SK+  LD+E N        
Sbjct: 419 LDLGSNRLSELPTEINKLVALEVLRLNYNQLTSLPDEITQLSKLRILDLESN-------- 470

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                           LL  +P  +  L+ L  L++  NR+ + P+SI     L     G
Sbjct: 471 ----------------LLESLPNDLSGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAG 514

Query: 239 NNALSALPAEL 249
            N ++ +P E+
Sbjct: 515 ENDITDIPVEI 525



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 64/119 (53%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           G    E   L +L L  N + +L  ++  L  L VL +++N+L+ LP  I +L  L+ LD
Sbjct: 407 GPDLHELKTLVELDLGSNRLSELPTEINKLVALEVLRLNYNQLTSLPDEITQLSKLRILD 466

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +  N +  +P+++   T+L + +   N+LK  P+S+G+   L    A  N IT +P ++
Sbjct: 467 LESNLLESLPNDLSGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIPVEI 525


>gi|195391504|ref|XP_002054400.1| GJ22826 [Drosophila virilis]
 gi|261277888|sp|B4LXW1.1|SUR8_DROVI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194152486|gb|EDW67920.1| GJ22826 [Drosophila virilis]
          Length = 614

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 192/397 (48%), Gaps = 30/397 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 207 LDLRHNKLAEIPSVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 253

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +PD+IG+   L   D   N+L ++P S+
Sbjct: 254 SLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPDDIGNCVNLSALDLQHNELLDIPDSI 313

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N + S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 314 GNLKSLVRLGLRYNRLNSVPISLKNCKSMDEFNVEGNGITQLPDGMLASLSALTTITLSR 373

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P       + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G 
Sbjct: 374 NQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDVGT 433

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N +
Sbjct: 434 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRI 493

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +       LL  L+  + +             ++  T LSV+         NL 
Sbjct: 494 EVLPHEI------GLLHELQRLILQTNQITMLPRSIGHLSNLTHLSVSEN-------NLQ 540

Query: 371 AIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQ 406
            +P EI     +  L +++N  +++LP EL+ C +L+
Sbjct: 541 FLPEEIGSLESLENLYINQNPGLEKLPFELALCQNLK 577



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 186/399 (46%), Gaps = 61/399 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+ L L  N++  L E L++   L VL++ HNKL+E+P+ I  L  L +L + FN I 
Sbjct: 179 VNLRNLALNENSLTSLPESLKHCTQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRIT 238

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            + D++     L       N++KEL S++G  +NL+    S+N +  LP+D+ +C  +S 
Sbjct: 239 AVADDLRQLVNLTMLSLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPDDIGNCVNLSA 298

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P++IG+L  L+RL L  NR+ S+P 
Sbjct: 299 LDLQHNELL------------------------DIPDSIGNLKSLVRLGLRYNRLNSVPI 334

Query: 225 SISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYC---------VEACQ 274
           S+  C S+ EF +  N ++ LP   L  LS L T+ L  NQ   Y          V +  
Sbjct: 335 SLKNCKSMDEFNVEGNGITQLPDGMLASLSALTTITLSRNQFTSYPTGGPAQFTNVYSIN 394

Query: 275 LR-----------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           L                  L+ L++  N L+ LP ++G    + +L L  N L+ L   +
Sbjct: 395 LEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDVGTWVNMVELNLATNALQKLPDDI 454

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITM-ATRLSVTSKELS---------LEGM 367
           +N     +L    + L +  ++  +  K  ++ +   R+ V   E+          L+  
Sbjct: 455 MNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTN 514

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            ++ +P  I     +T L +S N++Q LP E+ S  SL+
Sbjct: 515 QITMLPRSIGHLSNLTHLSVSENNLQFLPEEIGSLESLE 553



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 170/364 (46%), Gaps = 39/364 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           +++L L+ ++I  L   +R    LT L +  NK+ +LP  IG L  L++L ++ NS+  +
Sbjct: 135 IKRLDLSKSSITVLPNTVRECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSL 194

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +   T L   D   N+L E+PS + R  +L+      N IT++ +DL     ++ L 
Sbjct: 195 PESLKHCTQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLS 254

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK+  L +  I +   LT L  S N L  +P+ IG+   L  LDL  N +L IP SI
Sbjct: 255 LRENKIKELGS-AIGALVNLTTLDVSHNHLEHLPDDIGNCVNLSALDLQHNELLDIPDSI 313

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSN 284
               SL    +  N L+++P  L     +   ++  N + +    + A    L+ + LS 
Sbjct: 314 GNLKSLVRLGLRYNRLNSVPISLKNCKSMDEFNVEGNGITQLPDGMLASLSALTTITLSR 373

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEAST 343
           N  +  P              TG P +      +N      L++ R  ++P    S A  
Sbjct: 374 NQFTSYP--------------TGGPAQFTNVYSIN------LEHNRIDKIPYGIFSRAKG 413

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                    T+L++       E M L+A+P ++     + +L+L+ N++Q+LP ++ +  
Sbjct: 414 --------LTKLNMK------ENM-LTALPLDVGTWVNMVELNLATNALQKLPDDIMNLQ 458

Query: 404 SLQV 407
           +L++
Sbjct: 459 NLEI 462


>gi|27819886|gb|AAO24991.1| LP05663p [Drosophila melanogaster]
          Length = 527

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 185/396 (46%), Gaps = 52/396 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 120 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 166

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 167 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 226

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 227 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 286

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P       + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G 
Sbjct: 287 NQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGT 346

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N +
Sbjct: 347 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRI 406

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +       LL  L                              + L L+   ++
Sbjct: 407 EVLPHEI------GLLHEL------------------------------QRLILQTNQIT 430

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P  I   G +T L +S N++Q LP E+ S  SL+
Sbjct: 431 MLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 466



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 171/364 (46%), Gaps = 39/364 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           +++L L+ ++I  +   ++    LT L +  NK+ +LP  IG L  L++L ++ NS+  +
Sbjct: 48  IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 107

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ + + + L   D   N+L E+P  + R  +L+      N IT++ +DL     ++ L 
Sbjct: 108 PESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLS 167

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK+  L +  I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI
Sbjct: 168 LRENKIRELGS-AIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 226

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSN 284
               SL    M  N LS++PA L     +   ++  N + +    + A    L+ + LS 
Sbjct: 227 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 286

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEAST 343
           N  +  P              TG P +      +N      L++ R  ++P    S A  
Sbjct: 287 NQFASYP--------------TGGPAQFTNVYSIN------LEHNRIDKIPYGIFSRAKG 326

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                    T+L++       E M L+A+P +I     + +L+L+ N++Q+LP ++ +  
Sbjct: 327 --------LTKLNMK------ENM-LTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQ 371

Query: 404 SLQV 407
           +L++
Sbjct: 372 NLEI 375


>gi|456825485|gb|EMF73881.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 405

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 182/378 (48%), Gaps = 24/378 (6%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 41  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 100

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 101 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 159

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 160 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 219

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 220 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 279

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L++L L  N        +       +L   ++RL        +   E++  +     
Sbjct: 280 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRL--------TILPEEIGQLQ---- 327

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF------- 409
              ++L L    L+ +P EI    ++  L L  N +  LP E+    +L+  +       
Sbjct: 328 -NLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLL 386

Query: 410 SDLVTNKESCISGCYLYW 427
           S+ +      +  C +Y+
Sbjct: 387 SEKIERIRKLLPQCIIYF 404



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 156/303 (51%), Gaps = 17/303 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+              +  +LQ L   +N +  L +++  L  L  L
Sbjct: 54  LDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 100

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N+L  LP  +
Sbjct: 101 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI 160

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIASWTMLTELIA 191
           GR  NL +   S N +T LPE++     + KL + G NK  T+L    I     L EL  
Sbjct: 161 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQLQNLQELHL 219

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L+ LP E+ +
Sbjct: 220 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 279

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L  N+ + +  E  Q + L VLDL  N L+ LP EIG++  L+KL L+ N L
Sbjct: 280 LQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQL 339

Query: 311 RTL 313
            TL
Sbjct: 340 TTL 342



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 151/323 (46%), Gaps = 40/323 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN  N  L  +P E+ K               +LQ+L L +N +  L E++  L  L VL
Sbjct: 77  LNSENNQLTTLPKEIGK-------------LQNLQELHLQNNQLTTLPEEIGQLQNLKVL 123

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N+L+ LP  IG+L  L+ L++  N +  +P EIG    L +   S N+L  LP  +
Sbjct: 124 HLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEI 183

Query: 134 GRCLNLSDFK--ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           G+  +L        N   T LP+++     + +L ++ N+LTVL    I     L  L  
Sbjct: 184 GQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKE-IGQLQNLRILDL 242

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N L  +P+ IG L  L+ LDL  N++  +P  I+   +L E  +  N   A P E+ +
Sbjct: 243 YQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQ 302

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT------------ 298
              L  LDL+ N+L     E  QL+ L  L LS N L+ LP EIG++             
Sbjct: 303 FQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 362

Query: 299 -----------TLRKLLLTGNPL 310
                       L+KL L  NPL
Sbjct: 363 ATLPEEIKQLKNLKKLYLHNNPL 385


>gi|260819644|ref|XP_002605146.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
 gi|229290477|gb|EEN61156.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
          Length = 844

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 189/400 (47%), Gaps = 44/400 (11%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L  ++N +  L E + +L  L VL+++HN++ E+PA IG L  LK++DVS N +  +
Sbjct: 344 LESLNASYNVLTSLPEGVGSLVSLRVLDIAHNEIKEMPAKIGGLRHLKNVDVSHNKLETL 403

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +G    L + + S N L  LP+++ +   L     S N + +LPE       +S LD
Sbjct: 404 PDTLGDDQLLSRLNASHNALTALPTNMRKLRTLDALDVSRNKLEALPEPFHFLRSLSFLD 463

Query: 167 VEGNKLTVLS-------------------------NNLIA----SWTMLTELIASKNLLN 197
           V  NKL VL+                          +LI         LTEL  S   L 
Sbjct: 464 VSDNKLPVLTAPRSLTCLKVAGNPLRLPTRVAGDNKSLIVRIGDDLRSLTELDISNIELT 523

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +P TI +L  L + +   N++ S+P++      L    + +N L+ALP +LG  + L  
Sbjct: 524 TLPTTICNLRFLEKFNARNNKLNSLPANFHRLRQLQHLDLAHNELTALPPKLGDFAYLSH 583

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           LD  +NQ++E+     +LR L  L+ SNN L+ LP   G ++ L  L L+ N L  L + 
Sbjct: 584 LDTSNNQVEEFMPSLVKLRSLQYLNFSNNKLTSLPDNFGTLSQLTTLDLSANQLPELPND 643

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
            ++         L S L  N    AS  +   I M        + L+L    + A+P +I
Sbjct: 644 RID--------ILASLLVLN----ASGNQVTAIPMDMPYLYRIQVLNLSANVIKALPGDI 691

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           W    +T LDLS N ++ +P  ++   S  +K  D+  NK
Sbjct: 692 WRMKSLTTLDLSDNMLEGIPETITKLPS--IKSVDISNNK 729



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 160/303 (52%), Gaps = 15/303 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           +N S  +++ +P EVY+N +E     K+ +A         +N + ++ + +  L  L  L
Sbjct: 45  MNFSTCNMKALPEEVYEN-EELAMKTKYLDA--------QNNRLRRVPKGIGRLESLRSL 95

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +V++N +  +P ++  L  L S++ S N I  +P  I  A+AL   + + N+LK LP ++
Sbjct: 96  DVTNNTVRAIPGSVSRLKYLTSIEASTNQIKSLPKTIHKASALTTINAAGNKLKTLPKNI 155

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI-AS 192
           G   +++   AS+N I +LP+ +      S ++V  N+L  L   +IA  T    +I AS
Sbjct: 156 GSSSSITYIDASSNSIKTLPKSIYKLH--SSVNVSNNQLRTLP-AVIAKGTCSINVIDAS 212

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +NL++ +PE +  L RL+ L+L  N++  IP +I     L    + +N L  LP ++  L
Sbjct: 213 RNLIHTLPEGLDKLQRLVSLNLSHNQLDCIPPTIGTLRYLEFLDLSHNQLDFLPDDICNL 272

Query: 253 SK-LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              L TL    N+L +   +   LR + VLDLS N L+ LP + GK  ++  L L+ N L
Sbjct: 273 RHCLVTLHASHNRLTQLPDQIHNLRKIHVLDLSENKLTSLPAKFGKTDSVVSLDLSHNQL 332

Query: 311 RTL 313
            +L
Sbjct: 333 SSL 335



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 110/211 (52%)

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
           NL  L   N  +NKL+ LPA    L  L+ LD++ N +  +P ++G    L   D S+NQ
Sbjct: 531 NLRFLEKFNARNNKLNSLPANFHRLRQLQHLDLAHNELTALPPKLGDFAYLSHLDTSNNQ 590

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
           ++E   SL +  +L     SNN +TSLP++    S+++ LD+  N+L  L N+ I     
Sbjct: 591 VEEFMPSLVKLRSLQYLNFSNNKLTSLPDNFGTLSQLTTLDLSANQLPELPNDRIDILAS 650

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L  L AS N +  +P  +  L R+  L+L  N I ++P  I    SL    + +N L  +
Sbjct: 651 LLVLNASGNQVTAIPMDMPYLYRIQVLNLSANVIKALPGDIWRMKSLTTLDLSDNMLEGI 710

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
           P  + KL  + ++D+ +N+L+ +     +LR
Sbjct: 711 PETITKLPSIKSVDISNNKLRSFPKTMERLR 741



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 157/355 (44%), Gaps = 65/355 (18%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS---- 102
           L +L  +HN +  L  ++R L  L  L+VS NKL  LP     L  L  LDVS N     
Sbjct: 413 LSRLNASHNALTALPTNMRKLRTLDALDVSRNKLEALPEPFHFLRSLSFLDVSDNKLPVL 472

Query: 103 -----------------------------IMKIPDEIGSATAL----------------- 116
                                        I++I D++ S T L                 
Sbjct: 473 TAPRSLTCLKVAGNPLRLPTRVAGDNKSLIVRIGDDLRSLTELDISNIELTTLPTTICNL 532

Query: 117 ---VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
               KF+  +N+L  LP++  R   L     ++N +T+LP  L D + +S LD   N++ 
Sbjct: 533 RFLEKFNARNNKLNSLPANFHRLRQLQHLDLAHNELTALPPKLGDFAYLSHLDTSNNQVE 592

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS-ISGCCSL 232
               +L+   + L  L  S N L  +P+  G+LS+L  LDL  N++  +P+  I    SL
Sbjct: 593 EFMPSLVKLRS-LQYLNFSNNKLTSLPDNFGTLSQLTTLDLSANQLPELPNDRIDILASL 651

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
                  N ++A+P ++  L ++  L+L +N +K    +  +++ L+ LDLS+N L G+P
Sbjct: 652 LVLNASGNQVTAIPMDMPYLYRIQVLNLSANVIKALPGDIWRMKSLTTLDLSDNMLEGIP 711

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
             I K+ +++ + ++ N LR+          P  ++ LR +   N   +    KE
Sbjct: 712 ETITKLPSIKSVDISNNKLRSF---------PKTMERLRQKASVNTSDQDPNKKE 757



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 143/338 (42%), Gaps = 65/338 (19%)

Query: 73  LNVSHNKLSELPAAIGELHML----KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           +N S   +  LP  + E   L    K LD   N + ++P  IG   +L   D ++N ++ 
Sbjct: 45  MNFSTCNMKALPEEVYENEELAMKTKYLDAQNNRLRRVPKGIGRLESLRSLDVTNNTVRA 104

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           +P S+ R   L+  +AS N I SLP+ +   S ++ ++  GNKL  L  N I S + +T 
Sbjct: 105 IPGSVSRLKYLTSIEASTNQIKSLPKTIHKASALTTINAAGNKLKTLPKN-IGSSSSITY 163

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS-GCCSLAEFYMGNNALSALPA 247
           + AS N +  +P++I  L   +  ++  N++ ++P+ I+ G CS+       N +  LP 
Sbjct: 164 IDASSNSIKTLPKSIYKLHSSV--NVSNNQLRTLPAVIAKGTCSINVIDASRNLIHTLPE 221

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
            L KL +L +L+L  NQL   C+                    PP IG +  L  L L+ 
Sbjct: 222 GLDKLQRLVSLNLSHNQLD--CI--------------------PPTIGTLRYLEFLDLSH 259

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L   + N                         +  L+T           L     
Sbjct: 260 NQLDFLPDDICN------------------------LRHCLVT-----------LHASHN 284

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            L+ +P +I    +I  LDLS N +  LP +     S+
Sbjct: 285 RLTQLPDQIHNLRKIHVLDLSENKLTSLPAKFGKTDSV 322



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 17/167 (10%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED-LRNL 67
           R+   LN SN  L  +P             D +     L  L L+ N + +L  D +  L
Sbjct: 602 RSLQYLNFSNNKLTSLP-------------DNFGTLSQLTTLDLSANQLPELPNDRIDIL 648

Query: 68  PLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK 127
             L VLN S N+++ +P  +  L+ ++ L++S N I  +P +I    +L   D S N L+
Sbjct: 649 ASLLVLNASGNQVTAIPMDMPYLYRIQVLNLSANVIKALPGDIWRMKSLTTLDLSDNMLE 708

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLP---EDLADCSKMSKLDVEGNK 171
            +P ++ +  ++     SNN + S P   E L   + ++  D + NK
Sbjct: 709 GIPETITKLPSIKSVDISNNKLRSFPKTMERLRQKASVNTSDQDPNK 755


>gi|256073912|ref|XP_002573271.1| shoc2 [Schistosoma mansoni]
          Length = 515

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 162/300 (54%), Gaps = 28/300 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIM 104
           +L+ L+L +N +  + ++++ L  L+VL VS N +  +LP++IGEL  L  LD+SFN I 
Sbjct: 176 NLEHLLLTYNKLTHIVDEIKYLKRLSVLVVSRNLIRQDLPSSIGELTKLVKLDLSFNHIT 235

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PD IG  T+L   +   NQL +LP S+G  +NL       N +  +P  LA+C K+ +
Sbjct: 236 FLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLDE 295

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNL------------------------LNGMP 200
            +VE N+L+ L NNL+     L  +  S+N                         +  +P
Sbjct: 296 FNVENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGDPQQFQMCYTINMDHNEITNIP 355

Query: 201 ETIGSL-SRLIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +++ SL S LI+L+L  N + S I   +    +L E  +G+N LS LP E+ KL  L  L
Sbjct: 356 KSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELPTEINKLVALEVL 415

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L+ NQL     E  QL +L +LDL +N L  LP ++  +T+L++L +  N L+T  +S+
Sbjct: 416 RLNYNQLTSLPDEITQLSKLRILDLESNLLESLPNDLSGLTSLQELNVLCNRLKTFPASI 475



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 181/401 (45%), Gaps = 60/401 (14%)

Query: 16  LSNRSLRDVPNEVYKNFDEAG---EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +S  S++      Y++FD++        W  A  +   I    N+E+L  DLR       
Sbjct: 109 VSRHSMKKAKPPQYQSFDKSKTTVAQQNWLTASGIPNEITKLTNLEQL--DLR------- 159

Query: 73  LNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE-LP 130
               +N+L   LP  I  L+ L+ L +++N +  I DEI     L     S N +++ LP
Sbjct: 160 ----YNRLDGPLPTCICGLYNLEHLLLTYNKLTHIVDEIKYLKRLSVLVVSRNLIRQDLP 215

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           SS+G    L     S N IT LP+ +  C+ +  L+++ N+LT L               
Sbjct: 216 SSIGELTKLVKLDLSFNHITFLPDSIGKCTSLRDLNLQHNQLTKL--------------- 260

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
                    P++IG+L  L RL +  N+++ IP+S++ C  L EF + NN LS+LP  L 
Sbjct: 261 ---------PDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLDEFNVENNQLSSLPNNLL 311

Query: 251 K-LSKLGTLDLHSNQLKEY-CVEACQLRL-SVLDLSNNSLSGLPPEIGKMTT-LRKLLLT 306
             L  L  + L  N    +   +  Q ++   +++ +N ++ +P  +  + + L KL L 
Sbjct: 312 PCLHNLLNITLSRNYFTNFPSGDPQQFQMCYTINMDHNEITNIPKSVFSLASNLIKLNLR 371

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
            N L +L      GP    LK L    L  N  SE  T    L+ +          L L 
Sbjct: 372 DNALDSLI-----GPDLHELKTLVELDLGSNRLSELPTEINKLVALEV--------LRLN 418

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              L+++P EI +  ++  LDL  N ++ LP +LS   SLQ
Sbjct: 419 YNQLTSLPDEITQLSKLRILDLESNLLESLPNDLSGLTSLQ 459



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 127/278 (45%), Gaps = 49/278 (17%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L KL L+ N+I  L + +     L  LN+ HN+L++LP +IG L  L  L + +N 
Sbjct: 220 ELTKLVKLDLSFNHITFLPDSIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQ 279

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLP----EDLA 157
           +++IP  + +   L +F+  +NQL  LP++L  CL NL +   S N  T+ P    +   
Sbjct: 280 LVEIPASLANCVKLDEFNVENNQLSSLPNNLLPCLHNLLNITLSRNYFTNFPSGDPQQFQ 339

Query: 158 DC---------------------SKMSKLDVEGNKLTVL-----------------SNNL 179
            C                     S + KL++  N L  L                 SN L
Sbjct: 340 MCYTINMDHNEITNIPKSVFSLASNLIKLNLRDNALDSLIGPDLHELKTLVELDLGSNRL 399

Query: 180 IASWTMLTELIA------SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
               T + +L+A      + N L  +P+ I  LS+L  LDL  N + S+P+ +SG  SL 
Sbjct: 400 SELPTEINKLVALEVLRLNYNQLTSLPDEITQLSKLRILDLESNLLESLPNDLSGLTSLQ 459

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           E  +  N L   PA +G+L+KL  +    N + +  VE
Sbjct: 460 ELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIPVE 497



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 140/305 (45%), Gaps = 36/305 (11%)

Query: 106 IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           IP+EI   T L + D   N+L   LP+ +    NL     + N +T + +++    ++S 
Sbjct: 143 IPNEITKLTNLEQLDLRYNRLDGPLPTCICGLYNLEHLLLTYNKLTHIVDEIKYLKRLSV 202

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L        V+S NLI                  +P +IG L++L++LDL  N I  +P 
Sbjct: 203 L--------VVSRNLIRQ---------------DLPSSIGELTKLVKLDLSFNHITFLPD 239

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLS 283
           SI  C SL +  + +N L+ LP  +G L  L  L +  NQL E     A  ++L   ++ 
Sbjct: 240 SIGKCTSLRDLNLQHNQLTKLPDSIGNLVNLCRLSIKYNQLVEIPASLANCVKLDEFNVE 299

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN LS LP  +  +  L  LL     +   R+   N P+    ++        + +E + 
Sbjct: 300 NNQLSSLPNNL--LPCLHNLL----NITLSRNYFTNFPSGDPQQFQMCYTINMDHNEITN 353

Query: 344 TKEDLITMATRLSVTSKELSLEGMNL-SAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
             + + ++A+ L     +L+L    L S I  ++ E   + +LDL  N + ELP E++  
Sbjct: 354 IPKSVFSLASNLI----KLNLRDNALDSLIGPDLHELKTLVELDLGSNRLSELPTEINKL 409

Query: 403 ASLQV 407
            +L+V
Sbjct: 410 VALEV 414



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 64/119 (53%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           G    E   L +L L  N + +L  ++  L  L VL +++N+L+ LP  I +L  L+ LD
Sbjct: 380 GPDLHELKTLVELDLGSNRLSELPTEINKLVALEVLRLNYNQLTSLPDEITQLSKLRILD 439

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +  N +  +P+++   T+L + +   N+LK  P+S+G+   L    A  N IT +P ++
Sbjct: 440 LESNLLESLPNDLSGLTSLQELNVLCNRLKTFPASIGQLTKLKVIMAGENDITDIPVEI 498


>gi|421094569|ref|ZP_15555285.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362631|gb|EKP13668.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
          Length = 379

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 153/310 (49%), Gaps = 30/310 (9%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
            Y N  EA          D++ L L++  +  L +++  L  L +LN+  N+L+ LP  I
Sbjct: 30  TYHNLTEA-----LQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEI 84

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G+L  L+ L++  N    +P++IG    L +   S NQL   P+ +G+  NL +   S N
Sbjct: 85  GKLQNLQLLNLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVN 144

Query: 148 CITSLPEDLADCSKMSK-----------------------LDVEGNKLTVLSNNLIASWT 184
            +T+LP D+    K+ +                       LD+ GN+LT L    I    
Sbjct: 145 QLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKE-IGELK 203

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L EL   KN L  +P  IG L  L  L +  N++ ++P  I    +L E Y+  N L  
Sbjct: 204 NLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKT 263

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+G+L  L  LDLH N+LK    E  +L+ L+VLDL NN L  LP EIG++ +L  L
Sbjct: 264 LPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSLTVL 323

Query: 304 LLTGNPLRTL 313
            L  N L+TL
Sbjct: 324 DLRNNELKTL 333



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 152/320 (47%), Gaps = 38/320 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN+ L  +P E+              E  +L+ L L  N +  L  ++  L  L +L
Sbjct: 47  LDLSNKRLTTLPKEI-------------GELQNLRILNLYRNQLTTLPNEIGKLQNLQLL 93

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+ + LP  IG+L  L+ L +SFN +   P++IG    L +   S NQL  LP+ +
Sbjct: 94  NLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDI 153

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+   L       N + +L +++    ++  LD+ GN+LT L    I     L EL   K
Sbjct: 154 GKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKE-IGELKNLRELHLYK 212

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L +  N++ ++P  I    +L E Y+  N L  LP E+G+L 
Sbjct: 213 NQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQ 272

Query: 254 KLGTLDLHSNQLKEYCVEACQLR------------------------LSVLDLSNNSLSG 289
            L  LDLH N+LK    E  +L+                        L+VLDL NN L  
Sbjct: 273 NLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKT 332

Query: 290 LPPEIGKMTTLRKLLLTGNP 309
           LP EIGK+  LRKL L   P
Sbjct: 333 LPNEIGKLKELRKLHLDDIP 352



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 161/348 (46%), Gaps = 38/348 (10%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S+ +L+ LP  IGEL  L+ L++  N +  +P+EIG    L   
Sbjct: 34  LTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLL 93

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           +   NQ   LP+ +G+  NL +   S N +T+ P D+     + +L +  N+LT L N+ 
Sbjct: 94  NLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPND- 152

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L  L   +N L  + + IG L  L  LDL+ N++ ++P  I    +L E ++  
Sbjct: 153 IGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYK 212

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP ++G+L  L  L + SNQLK    E  +L+ L  L L  N L  LP EIG++ 
Sbjct: 213 NQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQ 272

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L  L L  N L+TL                                   I     L+V 
Sbjct: 273 NLTVLDLHINELKTLPKE--------------------------------IGELQNLTV- 299

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              L L    L  +P EI E   +T LDL  N ++ LP E+     L+
Sbjct: 300 ---LDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLKELR 344



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 149/340 (43%), Gaps = 49/340 (14%)

Query: 80  LSELPAA-IGELHML----------KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           LS+L A  IG  H L          + LD+S   +  +P EIG    L   +   NQL  
Sbjct: 20  LSQLKAQEIGTYHNLTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTT 79

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP+ +G+  NL       N  T+LP D+     + +L +  N+LT   N+ I     L E
Sbjct: 80  LPNEIGKLQNLQLLNLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPND-IGQLQNLRE 138

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S N L  +P  IG L +L RL L +N++ ++   I     L    +  N L+ LP E
Sbjct: 139 LHLSVNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKE 198

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L  L  L L+ NQLK    +  +L+ L VL + +N L  LP EIG++  L++L L  
Sbjct: 199 IGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYT 258

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L+TL                                   I     L+V    L L   
Sbjct: 259 NQLKTLPKE--------------------------------IGELQNLTV----LDLHIN 282

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            L  +P EI E   +T LDL  N ++ LP E+    SL V
Sbjct: 283 ELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSLTV 322



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 115/248 (46%), Gaps = 37/248 (14%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+LS   L  +PN++ K                L++L L  N ++ L +++  L  L V
Sbjct: 138 ELHLSVNQLTTLPNDIGK-------------LQKLERLSLIENQLKTLSKEIGYLKELQV 184

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+L+ LP  IGEL  L+ L +  N +  +P++IG    L      SNQLK LP  
Sbjct: 185 LDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKE 244

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL +     N + +LP+++ +   ++ LD+  N+L  L                 
Sbjct: 245 IGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTL----------------- 287

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+ IG L  L  LDL  N + ++P  I    SL    + NN L  LP E+GKL
Sbjct: 288 -------PKEIGELQNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKL 340

Query: 253 SKLGTLDL 260
            +L  L L
Sbjct: 341 KELRKLHL 348


>gi|421092130|ref|ZP_15552886.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
 gi|409999073|gb|EKO49773.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
          Length = 364

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 150/301 (49%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS    + +P E+ K               +LQ+L L  N +  L +++  L  L  L
Sbjct: 51  LNLSANRFKTLPKEIGK-------------LKNLQELNLNKNQLTILPKEIGQLKNLRKL 97

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+ + LP  + +L  LK L +  N +  +P+EIG    L     + NQ K +P  +
Sbjct: 98  NLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEI 157

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL      NN +T+LP ++     +  LD+  N+LT L N  I     L +L  S 
Sbjct: 158 GQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNE-IGQLQKLQDLYLST 216

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L L  N++  +P+ I    +L   Y+ +N L+ L  ++ +L 
Sbjct: 217 NRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQ 276

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L +LDL +NQL  +  E  QL+ L VLDL +N L+ LP EIG++  L+   L  N L T
Sbjct: 277 NLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTT 336

Query: 313 L 313
           L
Sbjct: 337 L 337



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 145/270 (53%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++  N   
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+     L +    SN+L  LP+ +G+  NL   K ++N   ++P+++     +  
Sbjct: 106 ILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQT 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+LT L N  I     L  L    N L  +P  IG L +L  L L  NR+ ++P+
Sbjct: 166 LNLGNNQLTALPNE-IGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPN 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+G+N L+ LP E+G+L  L TL L SN+L     +  QL+ L  LDL 
Sbjct: 225 EIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLW 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           NN L+  P EI ++  L+ L L  N L TL
Sbjct: 285 NNQLTTFPKEIEQLKNLQVLDLGSNQLTTL 314



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 148/308 (48%), Gaps = 35/308 (11%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNL+   L  +P E+   KN  +    D  +  +        +L++L L  N +  L  +
Sbjct: 74  LNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNE 133

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL ++HN+   +P  IG+L  L++L++  N +  +P+EIG    L   D  S
Sbjct: 134 IGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGS 193

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP+ +G+   L D   S N +T+LP ++     + +L +  N+LT+L        
Sbjct: 194 NRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTIL-------- 245

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  IG L  L  L L  NR+ ++   I    +L    + NN L+
Sbjct: 246 ----------------PNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLT 289

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
             P E+ +L  L  LDL SNQL     E  QL+ L V +L+NN L+ LP EIG++  L++
Sbjct: 290 TFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQE 349

Query: 303 LLLTGNPL 310
           L L  N L
Sbjct: 350 LYLIDNQL 357



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 141/290 (48%), Gaps = 15/290 (5%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            + S+N+ K LP  +G+  NL +   + N +T LP+++     + KL++  N+ T+L   
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKE 110

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            +     L EL    N L  +P  IG L  L  L L  N+  +IP  I    +L    +G
Sbjct: 111 -VEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLG 169

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           NN L+ALP E+G+L  L +LDL SN+L     E  QL +L  L LS N L+ LP EIG++
Sbjct: 170 NNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQL 229

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L++L L  N L  L + +        L YLRS       +  +T  +D+  +      
Sbjct: 230 QNLQELYLGSNQLTILPNEIGQLKNLQTL-YLRS-------NRLTTLSKDIEQLQNL--- 278

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             K L L    L+  P EI +   +  LDL  N +  LP E+    +LQV
Sbjct: 279 --KSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQV 326



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 109/253 (43%), Gaps = 60/253 (23%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL N  L  +PNE+ +                                 L+N   L  
Sbjct: 165 TLNLGNNQLTALPNEIGQ---------------------------------LQN---LKS 188

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+ LP  IG+L  L+ L +S N +  +P+EIG    L +    SNQL  LP+ 
Sbjct: 189 LDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNE 248

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL      +N +T+L +D+     +  LD+  N+LT                   
Sbjct: 249 IGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTT------------------ 290

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+ I  L  L  LDL  N++ ++P  I    +L  F + NN L+ LP E+G+L
Sbjct: 291 ------FPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQL 344

Query: 253 SKLGTLDLHSNQL 265
             L  L L  NQL
Sbjct: 345 QNLQELYLIDNQL 357



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 10/148 (6%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEG--------DKWWEAVDLQKLILAHNNIEKLKED 63
           L LS   L  +PNE+   +N  E   G        ++  +  +LQ L L  N +  L +D
Sbjct: 212 LYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD 271

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L++ +N+L+  P  I +L  L+ LD+  N +  +P EIG    L  F+ ++
Sbjct: 272 IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNN 331

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITS 151
           NQL  LP  +G+  NL +    +N ++S
Sbjct: 332 NQLTTLPKEIGQLQNLQELYLIDNQLSS 359


>gi|418726603|ref|ZP_13285214.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960513|gb|EKO24267.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 405

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 106/301 (35%), Positives = 154/301 (51%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS ++   +P E+ K               +LQKL L  N ++ L +++  L  L  L
Sbjct: 53  LDLSGQNFTTLPKEIEK-------------LKNLQKLYLFDNRLKTLPKEIGQLKNLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S N+L+ LP  IG+L  L+ LD+  N +  +P EIG    L     SSNQL  LP   
Sbjct: 100 NLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRES 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL +   S+N +T+LP+++     +  L+++ N+LT L    I     L  L  S 
Sbjct: 160 GKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKE-IEQLKNLQTLNLSD 218

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L+L  N++ ++P  I    +L    +  N L+ L  E+GKL 
Sbjct: 219 NQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQ 278

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L+LHSNQL     E  QL+ L  L LS N L  LP EIG++  L++L L  N L  
Sbjct: 279 NLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTA 338

Query: 313 L 313
           L
Sbjct: 339 L 339



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 162/341 (47%), Gaps = 19/341 (5%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S    + LP  I +L  L+ L +  N +  +P EIG    L + + SSNQL  LP 
Sbjct: 52  VLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL      +N +T LP ++     +  L +  N+LT L          L EL  
Sbjct: 112 EIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE-SGKLENLQELNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P+ IG L  L  L+L  N++ ++   I    +L    + +N L+ LP E+GK
Sbjct: 171 SDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGK 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL+L  NQL    +E  +L+ L  L+LS N L+ L  EIGK+  L+ L L  N L
Sbjct: 231 LQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQL 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMN 368
            TL   +        LK L++          S +   L+ +   +      +EL+L    
Sbjct: 291 TTLSKEIEQ------LKNLQT---------LSLSYNRLVILPKEIGQLQNLQELNLWNNQ 335

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           L+A+P EI +   +  L L +N +   P E+    +LQ  +
Sbjct: 336 LTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLY 376



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 14/225 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L  +P E+              +  +LQ L L  N +  L +++  L  L  L
Sbjct: 168 LNLSDNQLTTLPQEI-------------GQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTL 214

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S N+L+ LP  IG+L  L +L++S N +  +P EIG    L   + S NQL  L   +
Sbjct: 215 NLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI 274

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL D    +N +T+L +++     +  L +  N+L +L    I     L EL    
Sbjct: 275 GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKE-IGQLQNLQELNLWN 333

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
           N L  +P  IG L  L  L L++NR+++ P  I    +L   Y+G
Sbjct: 334 NQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLG 378



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 1/215 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N +  L +++  L  L  LN+  N+L+ L   I +L  L++L++S N +  
Sbjct: 164 NLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTT 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   + S NQL  LP  +G+  NL     S N +T+L  ++     +  L
Sbjct: 224 LPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT LS   I     L  L  S N L  +P+ IG L  L  L+L  N++ ++P  
Sbjct: 284 NLHSNQLTTLSKE-IEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 342

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           I    +L    +  N L   P E+G+L  L TL L
Sbjct: 343 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYL 377



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 141/323 (43%), Gaps = 53/323 (16%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   +++     S    T+LP+++     + KL +  N+L  L    I     L 
Sbjct: 39  DLTKALQNPMDVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKE-IGQLKNLQ 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY----------- 236
           EL  S N L  +P+ IG L  L RLDL+ NR+  +P  I    +L   Y           
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 237 ------------MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
                       + +N L+ LP E+G+L  L TL+L SNQL     E  QL+ L  L+LS
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           +N L+ LP EIGK+  L  L L+ N L TL         P  +  L++    N      T
Sbjct: 218 DNQLTTLPIEIGKLQNLHTLNLSDNQLTTL---------PIEIGKLQNLHTLNLSGNQLT 268

Query: 344 T----------KEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITK 384
           T           +DL   + +L+  SKE         LSL    L  +P EI +   + +
Sbjct: 269 TLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQE 328

Query: 385 LDLSRNSIQELPPELSSCASLQV 407
           L+L  N +  LP E+    +LQ 
Sbjct: 329 LNLWNNQLTALPIEIGQLQNLQT 351



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 236 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSGNQLTTLSIEIGKLQNLQD 282

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ L   I +L  L++L +S+N ++ +P EIG    L + +  +NQL  LP  
Sbjct: 283 LNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 342

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           +G+  NL       N + + P+++     +  L + G+
Sbjct: 343 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 380


>gi|260826171|ref|XP_002608039.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
 gi|229293389|gb|EEN64049.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
          Length = 975

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 174/387 (44%), Gaps = 38/387 (9%)

Query: 43  EAVDLQKLI---LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           E  DLQ L    L +N +  L   + +L  L V+N+ +N+    P  + EL  +K LD+ 
Sbjct: 240 ELEDLQHLWYLSLENNLLRTLPSTMSHLHNLRVVNLWNNQFDTFPEVLCELPAMKELDIK 299

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF----------------- 142
            NSI ++P  +  A  L   +   N L   P  +     +  F                 
Sbjct: 300 NNSITRLPIALHRADKLEDLNVFGNPLTYPPRHVQGTRAIMTFLKQQGENLQPQTVNGHL 359

Query: 143 --KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               SN  +TS+PE++ D + +  LDV  N+LT +    I     L  + A  N+L  +P
Sbjct: 360 KIDLSNQGLTSIPEEVFDITGLEVLDVSNNELTSIPE-AIGRLQKLNRMDAGGNMLTSLP 418

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IGSLS+L  L ++ NR+  +P  I   C+L    +GNN LS LP ++ KL KL  L +
Sbjct: 419 QAIGSLSKLTHLYIYDNRLTELPPWICSLCNLEVLVVGNNRLSTLPPDIEKLRKLTNLHI 478

Query: 261 HSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           H NQLKE     C  L L VL   NN LS LPP +G++  LR+L +  N ++ L   +  
Sbjct: 479 HDNQLKEVPQAICSLLNLEVLVTGNNRLSKLPPGVGRLQNLRELFINDNQVKMLPLGVF- 537

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
               +L  +        E  + S  K   +    + +   +E+ L        P  + E 
Sbjct: 538 ----SLFNF--------EVLDVSNNKVSTLPPGAK-NANLREVYLYNNKFDTFPEVLCEL 584

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQ 406
             + KLD+  N+I  LP  L     L+
Sbjct: 585 PAMEKLDIRFNNISRLPTALHRADKLE 611



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 183/419 (43%), Gaps = 58/419 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN+ L  +P EV+             +  DL+ L +++N +  + E +  L  L  L
Sbjct: 17  LDLSNQGLTSIPEEVF-------------DITDLEVLDVSNNKLTNIPEAIGRLQKLDTL 63

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +   N L+ LP AI  L  LK L V  N +  +PD + S   L   +  +N+L +LPS +
Sbjct: 64  SAYSNMLTSLPHAIRSLQELKLLVVYNNDLSMLPDGLESLENLEYLNVKNNKLTKLPSKV 123

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
             C NL      NN +++ P  +    K++KL +  N+LT + +  + S + L  L  ++
Sbjct: 124 FSCPNLVVLNVGNNKLSTFPAGVEKLQKLTKLYLHSNELTEVPSG-VYSLSNLEVLCVAR 182

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG--------------- 238
           N +  + + I  L+RL  L +        P  +    +L   Y G               
Sbjct: 183 NPIRRLSDDITRLTRLKSLIVADCHFDEFPRQVLHLKTLEVLYAGQAGGSKFDMVPDELE 242

Query: 239 -----------NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNS 286
                      NN L  LP+ +  L  L  ++L +NQ   +    C+L  +  LD+ NNS
Sbjct: 243 DLQHLWYLSLENNLLRTLPSTMSHLHNLRVVNLWNNQFDTFPEVLCELPAMKELDIKNNS 302

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           ++ LP  + +   L  L + GNPL T     V G T A++ +L+    + E+ +  T   
Sbjct: 303 ITRLPIALHRADKLEDLNVFGNPL-TYPPRHVQG-TRAIMTFLKQ---QGENLQPQTVNG 357

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            L            ++ L    L++IP E+++   +  LD+S N +  +P  +     L
Sbjct: 358 HL------------KIDLSNQGLTSIPEEVFDITGLEVLDVSNNELTSIPEAIGRLQKL 404



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 142/318 (44%), Gaps = 39/318 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           ++LSN+ L  +P EV   FD  G          L+ L +++N +  + E +  L  L  +
Sbjct: 361 IDLSNQGLTSIPEEV---FDITG----------LEVLDVSNNELTSIPEAIGRLQKLNRM 407

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +   N L+ LP AIG L  L                    T L  +D   N+L ELP  +
Sbjct: 408 DAGGNMLTSLPQAIGSLSKL--------------------THLYIYD---NRLTELPPWI 444

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL      NN +++LP D+    K++ L +  N+L  +    I S   L  L+   
Sbjct: 445 CSLCNLEVLVVGNNRLSTLPPDIEKLRKLTNLHIHDNQLKEVP-QAICSLLNLEVLVTGN 503

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L+ +P  +G L  L  L ++ N++  +P  +    +     + NN +S LP    K +
Sbjct: 504 NRLSKLPPGVGRLQNLRELFINDNQVKMLPLGVFSLFNFEVLDVSNNKVSTLPPG-AKNA 562

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  + L++N+   +    C+L  +  LD+  N++S LP  + +   L  L ++GNPL  
Sbjct: 563 NLREVYLYNNKFDTFPEVLCELPAMEKLDIRFNNISRLPTALHRADKLEDLDVSGNPLTY 622

Query: 313 LRSSLVNGPTPALLKYLR 330
               +    T A++ +L+
Sbjct: 623 PPQDVCKQGTAAIMAFLK 640



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 184/427 (43%), Gaps = 44/427 (10%)

Query: 19  RSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHN 78
           RSL+++   V  N D +   D      +L+ L + +N + KL   + + P L VLNV +N
Sbjct: 78  RSLQELKLLVVYNNDLSMLPDGLESLENLEYLNVKNNKLTKLPSKVFSCPNLVVLNVGNN 137

Query: 79  KLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLN 138
           KLS  PA + +L  L  L +  N + ++P  + S + L     + N ++ L   + R   
Sbjct: 138 KLSTFPAGVEKLQKLTKLYLHSNELTEVPSGVYSLSNLEVLCVARNPIRRLSDDITRLTR 197

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKL---DVEGNKLTVLSNNLIASWTMLTELIASKNL 195
           L     ++      P  +     +  L      G+K  ++ + L      L  L    NL
Sbjct: 198 LKSLIVADCHFDEFPRQVLHLKTLEVLYAGQAGGSKFDMVPDEL-EDLQHLWYLSLENNL 256

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P T+  L  L  ++L  N+  + P  +    ++ E  + NN+++ LP  L +  KL
Sbjct: 257 LRTLPSTMSHLHNLRVVNLWNNQFDTFPEVLCELPAMKELDIKNNSITRLPIALHRADKL 316

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVL---------------------DLSNNSLSGLPPEI 294
             L++  N L  Y     Q   +++                     DLSN  L+ +P E+
Sbjct: 317 EDLNVFGNPLT-YPPRHVQGTRAIMTFLKQQGENLQPQTVNGHLKIDLSNQGLTSIPEEV 375

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY-----LRSRLPENEDSEASTTKEDLI 349
             +T L  L ++ N L ++  ++  G    L +      + + LP+   S +  T   L 
Sbjct: 376 FDITGLEVLDVSNNELTSIPEAI--GRLQKLNRMDAGGNMLTSLPQAIGSLSKLTH--LY 431

Query: 350 TMATRL--------SVTSKELSLEGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
               RL        S+ + E+ + G N LS +P +I +  ++T L +  N ++E+P  + 
Sbjct: 432 IYDNRLTELPPWICSLCNLEVLVVGNNRLSTLPPDIEKLRKLTNLHIHDNQLKEVPQAIC 491

Query: 401 SCASLQV 407
           S  +L+V
Sbjct: 492 SLLNLEV 498



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 19/213 (8%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           LN  P+ +  L   ++LDL    + SIP  +     L    + NN L+ +P  +G+L KL
Sbjct: 4   LNLQPQIVNGL---LKLDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTNIPEAIGRLQKL 60

Query: 256 GTLDLHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            TL  +SN L    + + + Q  L +L + NN LS LP  +  +  L  L +  N L  L
Sbjct: 61  DTLSAYSNMLTSLPHAIRSLQ-ELKLLVVYNNDLSMLPDGLESLENLEYLNVKNNKLTKL 119

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
            S + + P   +L    ++L     S      E L  + T+L + S EL+        +P
Sbjct: 120 PSKVFSCPNLVVLNVGNNKL-----STFPAGVEKLQKL-TKLYLHSNELT-------EVP 166

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           S ++    +  L ++RN I+ L  +++    L+
Sbjct: 167 SGVYSLSNLEVLCVARNPIRRLSDDITRLTRLK 199


>gi|421090489|ref|ZP_15551281.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000703|gb|EKO51331.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 448

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 191/393 (48%), Gaps = 25/393 (6%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           + Y+N  EA +  K     D + L L+ + +  L +++  L  L  L +++N+L+ LP  
Sbjct: 35  QTYRNLTEALQNPK-----DARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNE 89

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG+L  L+ LD+  N +  +P EIG    L   +   N+L  LP  +G+  NL       
Sbjct: 90  IGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDL 149

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LPE +     +  L+++ NKLT+L    I     L  L +  N L   P+ IG L
Sbjct: 150 NKLTILPEKIGQLQNLQVLNLDLNKLTILPEK-IGQLQNLQILNSQGNQLTTFPKEIGQL 208

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
            +L  L+L  NR+ ++   +    +L    + +N L+ LP E+G+L KL  L+L+  QLK
Sbjct: 209 QKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLK 268

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
                  QL+ L  L+L+   L+ LP EIG+++ L+KL L GN L TL   +        
Sbjct: 269 TLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEI------GQ 322

Query: 326 LKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           LK L+   L  N         E L  + T        L LEG  ++  P EI +   + +
Sbjct: 323 LKKLQELYLGNNPLRTLPKEIEQLQKLQT--------LYLEGNQITTFPKEIGQLQNLQE 374

Query: 385 LDLSRNSIQELPPELSSCASLQ---VKFSDLVT 414
           L+L  N +  LP E+    +LQ   ++F+ L T
Sbjct: 375 LNLGFNQLTTLPQEIGQLQNLQELNLEFNQLAT 407



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 144/312 (46%), Gaps = 48/312 (15%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L VLN+  NKL+ LP  IG+L  L+ L++  N +  
Sbjct: 118 NLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTI 177

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P++IG    L   +   NQL   P  +G+   L +     N +T+L E++     +  L
Sbjct: 178 LPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQIL 237

Query: 166 DVEGNKLTVLSNNLIASWTMLTEL----IASKNLLNG-------------------MPET 202
           D+  N LT L    I     L EL    I  K L  G                   +P+ 
Sbjct: 238 DLISNPLTTLPKE-IGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKE 296

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG LS+L +L L+ N++ ++P  I     L E Y+GNN L  LP E+ +L KL TL L  
Sbjct: 297 IGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEG 356

Query: 263 NQLKEYCVEACQLR------------------------LSVLDLSNNSLSGLPPEIGKMT 298
           NQ+  +  E  QL+                        L  L+L  N L+ LP E+G++ 
Sbjct: 357 NQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQ 416

Query: 299 TLRKLLLTGNPL 310
            LRKL L  NP+
Sbjct: 417 KLRKLNLYNNPI 428



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L L +N +  L +++  L  L  L +  N+++  P  IG+L  L+ L++ FN +  +
Sbjct: 326 LQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTL 385

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           P EIG    L + +   NQL  LP  +G+   L      NN I S
Sbjct: 386 PQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIAS 430


>gi|332020817|gb|EGI61215.1| Leucine-rich repeat-containing protein 40 [Acromyrmex echinatior]
          Length = 607

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 205/456 (44%), Gaps = 84/456 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGD---------------KWWEAVDLQ 48
           I+  AR +G LNLS++ L  VP++++ N +E  E +               +WWE   L+
Sbjct: 30  IIIGARKTGQLNLSSKGLSTVPDKIW-NINELTEEELRDLHFELDYEPLEERWWEQEPLK 88

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNV----SHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            L ++ N++  +   +  L  L  LN+    S N L ELP  IG L  LK L++S N + 
Sbjct: 89  MLDMSCNSLTVIDNKIELLTELNTLNICINYSFNLLEELPPEIGSLRKLKVLNLSDNRLK 148

Query: 105 KIPDE-----------------------IGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
            +P E                       IG    L   D S N L+ELP  +G  + L  
Sbjct: 149 NLPHEFYMLEELCELYLRSNQISILEAEIGDLIMLTYMDLSYNNLRELPIGMGYLVRLKT 208

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
                N I  LP D+ +   +  LD+  N+L ++                          
Sbjct: 209 LNLCQNMIKELPPDVTNMRSLKTLDISFNQLEIIP------------------------- 243

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDL 260
            +G L ++ R+    N +   P  ISGC +L   ++ NN +S + P  L  +  L  L +
Sbjct: 244 PLGELRKVERIMFQSNNLQEFP-DISGCSALTVLHLDNNNISEIDPQRLEVVGHLKQLTM 302

Query: 261 HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +N ++    E  +L  L V DLS+N++S +P  IG +  L++  + GN ++ +R  ++ 
Sbjct: 303 QNNIIEIIPEEIIKLINLEVFDLSHNNISLIPYCIGILPNLKQFAIEGNNIKNIRGDIIR 362

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKE-------DLITMATRLSVTSKELSLEGMNLSAI 372
             TP +L ++R  +  N    +  T+E       ++I     +   ++  SL G NLS I
Sbjct: 363 CGTPRILTHIRQTVDVN---TSMNTRELLQPSVSNIIHPDKYMMKNTRLFSLAGQNLSEI 419

Query: 373 PSEIWE-AGE--ITKLDLSRNSIQELPPELSSCASL 405
             EI E A E  +T +DLSRN +  LP ++S+  ++
Sbjct: 420 SEEILEDAAEVSVTTIDLSRNKLSGLPNKMSAIVTV 455



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 149/290 (51%), Gaps = 26/290 (8%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI---GSATAL------VKFD 120
           L V ++SHN +S +P  IG L  LK   +  N+I  I  +I   G+   L      V  +
Sbjct: 320 LEVFDLSHNNISLIPYCIGILPNLKQFAIEGNNIKNIRGDIIRCGTPRILTHIRQTVDVN 379

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLP------------EDLADCSKMSKLDVE 168
            S N  + L  S+   ++   +   N  + SL             ED A+ S ++ +D+ 
Sbjct: 380 TSMNTRELLQPSVSNIIHPDKYMMKNTRLFSLAGQNLSEISEEILEDAAEVS-VTTIDLS 438

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR-LDLHQNRILSIPSSIS 227
            NKL+ L N + A  T+ T+L  + N L  +PE IG   + ++ LD+ +N + S+PS+I 
Sbjct: 439 RNKLSGLPNKMSAIVTV-TDLKLTSNHLASLPEWIGEKYKCLQILDISKNHLQSLPSNIG 497

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNN 285
               L +  +  N  + LP  +  +  L +L  + NQ+ +  V   +   RL+VL+L+NN
Sbjct: 498 CLKYLRDIDISFNRFTELPETIYDVEALESLIANDNQIAKIDVPLLEKLKRLAVLNLTNN 557

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           +++ +PPE+G +  LR LLL+GN  +  R +++   T  +L YLR+ +P+
Sbjct: 558 NIAHIPPELGNLKNLRNLLLSGNCFKYPRQAILMKDTEEILSYLRNLIPQ 607



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 200/454 (44%), Gaps = 87/454 (19%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R    LNLS+  L+++P+E Y                +L +L L  N I  L+ ++ +L 
Sbjct: 135 RKLKVLNLSDNRLKNLPHEFYM-------------LEELCELYLRSNQISILEAEIGDLI 181

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           +LT +++S+N L ELP  +G L  LK+L++  N I ++P ++ +  +L   D S NQL+ 
Sbjct: 182 MLTYMDLSYNNLRELPIGMGYLVRLKTLNLCQNMIKELPPDVTNMRSLKTLDISFNQLEI 241

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           +P  LG    +      +N +   P D++ CS ++ L ++ N ++ +    +     L +
Sbjct: 242 IPP-LGELRKVERIMFQSNNLQEFP-DISGCSALTVLHLDNNNISEIDPQRLEVVGHLKQ 299

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L    N++  +PE I  L  L   DL  N I  IP  I    +L +F +  N +  +  +
Sbjct: 300 LTMQNNIIEIIPEEIIKLINLEVFDLSHNNISLIPYCIGILPNLKQFAIEGNNIKNIRGD 359

Query: 249 LGK------LSKL-GTLD------------------LHSNQL------------------ 265
           + +      L+ +  T+D                  +H ++                   
Sbjct: 360 IIRCGTPRILTHIRQTVDVNTSMNTRELLQPSVSNIIHPDKYMMKNTRLFSLAGQNLSEI 419

Query: 266 -KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL----------- 313
            +E   +A ++ ++ +DLS N LSGLP ++  + T+  L LT N L +L           
Sbjct: 420 SEEILEDAAEVSVTTIDLSRNKLSGLPNKMSAIVTVTDLKLTSNHLASLPEWIGEKYKCL 479

Query: 314 ------RSSLVNGPTP-ALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
                 ++ L + P+    LKYLR   +  N  +E   T  D+  + + ++  ++     
Sbjct: 480 QILDISKNHLQSLPSNIGCLKYLRDIDISFNRFTELPETIYDVEALESLIANDNQ----- 534

Query: 366 GMNLSAIPSEIWEA-GEITKLDLSRNSIQELPPE 398
              ++ I   + E    +  L+L+ N+I  +PPE
Sbjct: 535 ---IAKIDVPLLEKLKRLAVLNLTNNNIAHIPPE 565


>gi|194900450|ref|XP_001979770.1| GG16778 [Drosophila erecta]
 gi|261277885|sp|B3P3E8.1|SUR8_DROER RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|190651473|gb|EDV48728.1| GG16778 [Drosophila erecta]
          Length = 644

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 187/396 (47%), Gaps = 52/396 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 237 LDLRHNKLAEIPPVIYR-------------LRSLTTLYLRFNRITAVADDLRQLVNLTML 283

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 284 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 343

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N + S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 344 GNLKSLVRLGMRYNRLNSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 403

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P       + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G 
Sbjct: 404 NQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGT 463

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N +
Sbjct: 464 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRI 523

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +       LL  L+                       RL + + ++++      
Sbjct: 524 EVLPHEI------GLLHELQ-----------------------RLILQTNQITM------ 548

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P  I   G +T L +S N++Q LP E+ S  SL+
Sbjct: 549 -LPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLE 583



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 171/364 (46%), Gaps = 39/364 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           +++L L+ ++I  +   ++    LT L +  NK+ +LP  IG L  L++L ++ NS+  +
Sbjct: 165 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLTSL 224

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ + + + L   D   N+L E+P  + R  +L+      N IT++ +DL     ++ L 
Sbjct: 225 PESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLS 284

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK+  L +  I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI
Sbjct: 285 LRENKIRELGS-AIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 343

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSN 284
               SL    M  N L+++PA L     +   ++  N + +    + A    L+ + LS 
Sbjct: 344 GNLKSLVRLGMRYNRLNSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 403

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEAST 343
           N  +  P              TG P +      +N      L++ R  ++P    S A  
Sbjct: 404 NQFASYP--------------TGGPAQFTNVYSIN------LEHNRIDKIPYGIFSRAKG 443

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                    T+L++       E M L+A+P +I     + +L+L+ N++Q+LP ++ +  
Sbjct: 444 L--------TKLNMK------ENM-LTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQ 488

Query: 404 SLQV 407
           +L++
Sbjct: 489 NLEI 492


>gi|386392500|ref|ZP_10077281.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
 gi|385733378|gb|EIG53576.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
          Length = 1279

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 188/404 (46%), Gaps = 25/404 (6%)

Query: 13  SLNLSNRSLRDVPNEV-----YKNFDEAGEG-----DKWWEAVDLQKLILAHNNIEKLKE 62
           SL +S  +L  +PN +      +  D +  G     D   E  +LQ L ++  ++  L  
Sbjct: 109 SLYVSRTALTTLPNSIRQLSNLRRLDISFSGFINLPDSIGEMPNLQDLNVSSTDLTTLPA 168

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
            +  L  L  L+VS   L+ LP +IG+L MLK LDVS   +  +PD IG  T L   D S
Sbjct: 169 SIGQLTRLQHLDVSSTGLTSLPDSIGQLSMLKHLDVSGTDLATLPDSIGQLTNLKHLDVS 228

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           S  L  LP S+G+  +L     S   + +LP+ +   S +  LDV G +L +L ++ I  
Sbjct: 229 STSLNTLPDSIGQLSSLQHLDVSGTSLQTLPDSIGQLSSLQHLDVSGTRLQILPDS-IVQ 287

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            + L  L  S   +N +P++IG LS L  LD+    + ++P SI    +L    + + +L
Sbjct: 288 LSSLQHLDVSDTSINNLPDSIGQLSNLQHLDVSDTSLNTLPDSIGQLSNLQHLEVSDASL 347

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP  + +LS L  L+L    L       CQL  L  L+LS   L+ LP  I ++ +L+
Sbjct: 348 NTLPETIWRLSSLQDLNLSGTGLTTLPEALCQLSSLQDLNLSGTGLTTLPEAICQLNSLQ 407

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L L+G  L TL         P  +  L S    N      TT  + I     L    ++
Sbjct: 408 DLNLSGTGLTTL---------PEAICQLNSLQDLNLSGTGLTTLPEAICQLNSL----QD 454

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           L+L G  L+ +P  I +   +  L+LS   +  LP  +    +L
Sbjct: 455 LNLSGTGLTTLPGAICQLNSLQDLNLSGTGLTTLPETIGQLTNL 498



 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 116/371 (31%), Positives = 178/371 (47%), Gaps = 20/371 (5%)

Query: 40  KWWEAV-DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           KW E +  L+ L ++  +++KL E +  L  L  L VS   L+ LP +I +L  L+ LD+
Sbjct: 76  KWLECLTGLETLNISGTSLKKLPEFIGELVGLQSLYVSRTALTTLPNSIRQLSNLRRLDI 135

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           SF+  + +PD IG    L   + SS  L  LP+S+G+   L     S+  +TSLP+ +  
Sbjct: 136 SFSGFINLPDSIGEMPNLQDLNVSSTDLTTLPASIGQLTRLQHLDVSSTGLTSLPDSIGQ 195

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
            S +  LDV G  L  L ++ I   T L  L  S   LN +P++IG LS L  LD+    
Sbjct: 196 LSMLKHLDVSGTDLATLPDS-IGQLTNLKHLDVSSTSLNTLPDSIGQLSSLQHLDVSGTS 254

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           + ++P SI    SL    +    L  LP  + +LS L  LD+    +        QL  L
Sbjct: 255 LQTLPDSIGQLSSLQHLDVSGTRLQILPDSIVQLSSLQHLDVSDTSINNLPDSIGQLSNL 314

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             LD+S+ SL+ LP  IG+++ L+ L ++   L TL  ++              RL   +
Sbjct: 315 QHLDVSDTSLNTLPDSIGQLSNLQHLEVSDASLNTLPETIW-------------RLSSLQ 361

Query: 338 DSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           D   S T   L T+   L   S  ++L+L G  L+ +P  I +   +  L+LS   +  L
Sbjct: 362 DLNLSGT--GLTTLPEALCQLSSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTL 419

Query: 396 PPELSSCASLQ 406
           P  +    SLQ
Sbjct: 420 PEAICQLNSLQ 430



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 178/362 (49%), Gaps = 15/362 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L +A N I  L + L  L  L  LN+S   L +LP  IGEL  L+SL VS  ++  
Sbjct: 60  NLKSLTIASNPITILPKWLECLTGLETLNISGTSLKKLPEFIGELVGLQSLYVSRTALTT 119

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+ I   + L + D S +    LP S+G   NL D   S+  +T+LP  +   +++  L
Sbjct: 120 LPNSIRQLSNLRRLDISFSGFINLPDSIGEMPNLQDLNVSSTDLTTLPASIGQLTRLQHL 179

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           DV    LT L ++ I   +ML  L  S   L  +P++IG L+ L  LD+    + ++P S
Sbjct: 180 DVSSTGLTSLPDS-IGQLSMLKHLDVSGTDLATLPDSIGQLTNLKHLDVSSTSLNTLPDS 238

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    SL    +   +L  LP  +G+LS L  LD+   +L+       QL  L  LD+S+
Sbjct: 239 IGQLSSLQHLDVSGTSLQTLPDSIGQLSSLQHLDVSGTRLQILPDSIVQLSSLQHLDVSD 298

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
            S++ LP  IG+++ L+ L ++   L TL  S+             S L   E S+AS  
Sbjct: 299 TSINNLPDSIGQLSNLQHLDVSDTSLNTLPDSIGQ----------LSNLQHLEVSDASLN 348

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
              L     RLS + ++L+L G  L+ +P  + +   +  L+LS   +  LP  +    S
Sbjct: 349 T--LPETIWRLS-SLQDLNLSGTGLTTLPEALCQLSSLQDLNLSGTGLTTLPEAICQLNS 405

Query: 405 LQ 406
           LQ
Sbjct: 406 LQ 407



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 168/362 (46%), Gaps = 15/362 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L ++  +++ L + +  L  L  L+VS  +L  LP +I +L  L+ LDVS  SI  +
Sbjct: 245 LQHLDVSGTSLQTLPDSIGQLSSLQHLDVSGTRLQILPDSIVQLSSLQHLDVSDTSINNL 304

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IG  + L   D S   L  LP S+G+  NL   + S+  + +LPE +   S +  L+
Sbjct: 305 PDSIGQLSNLQHLDVSDTSLNTLPDSIGQLSNLQHLEVSDASLNTLPETIWRLSSLQDLN 364

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + G  LT L   L    + L +L  S   L  +PE I  L+ L  L+L    + ++P +I
Sbjct: 365 LSGTGLTTLPEAL-CQLSSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPEAI 423

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL +  +    L+ LP  + +L+ L  L+L    L       CQL  L  L+LS  
Sbjct: 424 CQLNSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPGAICQLNSLQDLNLSGT 483

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP  IG++T L  L+ +   L TL         P  L  L +    N  + +  T 
Sbjct: 484 GLTTLPETIGQLTNLNNLMASNTALTTL---------PDTLGQLSNLEFLNISNTSLVTL 534

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            D I + + L +    L +   +L  +P  I +   +  L++S   +  LP  +    +L
Sbjct: 535 PDSIGLLSHLQI----LFVSDTDLVTLPESIGQLTSLEILNVSNTGLTSLPESIGRLTNL 590

Query: 406 QV 407
           Q+
Sbjct: 591 QI 592



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 171/378 (45%), Gaps = 14/378 (3%)

Query: 42  WEAVDLQKLILAHNNIEKLKE--DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           W+ + +Q  ++     +K++E   L      + L++S  +LS LP  +  L  LKSL ++
Sbjct: 8   WDFIKIQDDVIKLTVGKKIREFLTLAKQEKWSCLDLSALELSFLPLDLPPLTNLKSLTIA 67

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N I  +P  +   T L   + S   LK+LP  +G  + L     S   +T+LP  +   
Sbjct: 68  SNPITILPKWLECLTGLETLNISGTSLKKLPEFIGELVGLQSLYVSRTALTTLPNSIRQL 127

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           S + +LD+  +    L ++ I     L +L  S   L  +P +IG L+RL  LD+    +
Sbjct: 128 SNLRRLDISFSGFINLPDS-IGEMPNLQDLNVSSTDLTTLPASIGQLTRLQHLDVSSTGL 186

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
            S+P SI     L    +    L+ LP  +G+L+ L  LD+ S  L        QL  L 
Sbjct: 187 TSLPDSIGQLSMLKHLDVSGTDLATLPDSIGQLTNLKHLDVSSTSLNTLPDSIGQLSSLQ 246

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            LD+S  SL  LP  IG++++L+ L ++G  L+ L  S+V   +   L    + +    D
Sbjct: 247 HLDVSGTSLQTLPDSIGQLSSLQHLDVSGTRLQILPDSIVQLSSLQHLDVSDTSINNLPD 306

Query: 339 S--------EASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           S            +   L T+   +   S  + L +   +L+ +P  IW    +  L+LS
Sbjct: 307 SIGQLSNLQHLDVSDTSLNTLPDSIGQLSNLQHLEVSDASLNTLPETIWRLSSLQDLNLS 366

Query: 389 RNSIQELPPELSSCASLQ 406
              +  LP  L   +SLQ
Sbjct: 367 GTGLTTLPEALCQLSSLQ 384



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 150/315 (47%), Gaps = 35/315 (11%)

Query: 14  LNLSNRSLRDVPNEVYK-----NFDEAGEG-----DKWWEAVDLQKLILAHNNIEKLKED 63
           L +S+ SL  +P  +++     + + +G G     +   +   LQ L L+   +  L E 
Sbjct: 340 LEVSDASLNTLPETIWRLSSLQDLNLSGTGLTTLPEALCQLSSLQDLNLSGTGLTTLPEA 399

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  LN+S   L+ LP AI +L+ L+ L++S   +  +P+ I    +L   + S 
Sbjct: 400 ICQLNSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSG 459

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
             L  LP ++ +  +L D   S   +T+LPE +   + +              NNL+AS 
Sbjct: 460 TGLTTLPGAICQLNSLQDLNLSGTGLTTLPETIGQLTNL--------------NNLMASN 505

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
           T LT L          P+T+G LS L  L++    ++++P SI     L   ++ +  L 
Sbjct: 506 TALTTL----------PDTLGQLSNLEFLNISNTSLVTLPDSIGLLSHLQILFVSDTDLV 555

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP  +G+L+ L  L++ +  L        +L  L +L++SN  L+ LP  IG++ +L K
Sbjct: 556 TLPESIGQLTSLEILNVSNTGLTSLPESIGRLTNLQILNVSNTDLTSLPESIGQLKSLIK 615

Query: 303 LLLTGNPLRTLRSSL 317
           L ++   L +L  S+
Sbjct: 616 LNVSNTGLTSLPMSI 630


>gi|345324055|ref|XP_001513272.2| PREDICTED: leucine-rich repeat protein SHOC-2 [Ornithorhynchus
           anatinus]
          Length = 537

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 160/299 (53%), Gaps = 17/299 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N +  +++D++NL  L +L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRMTTVEKDIKNLSKLIML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT---MLTELI 190
           G   +L+      N ++++P  LA CS + +L++E N ++ L       ++   +L++L 
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEXXFGIFSRAKVLSKLN 340

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
              N L  +P   G+ + ++ L+L  N++  IP  +SG  SL    + NN L  LP  LG
Sbjct: 341 MKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLG 400

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            L KL  LDL  N+L+    E   L+ L  L L+NN L+ LP  IG +T L  L L  N
Sbjct: 401 NLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 459



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 123/410 (30%), Positives = 190/410 (46%), Gaps = 64/410 (15%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           +L L+  +I  L   ++ L  LT L +  NKL  LPA +G L  L +L +S NS+  +PD
Sbjct: 104 RLDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPD 163

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            + +   L   D   N+L+E+PS + R  +L+      N +T++ +D+ + SK+  L + 
Sbjct: 164 SLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRMTTVEKDIKNLSKLIMLSIR 223

Query: 169 GNK----------------LTVLSNNL------IASWTMLTELIASKNLLNGMPETIGSL 206
            NK                L V  N L      I + T +T L    N L  +PETIG+L
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNL 283

Query: 207 SRLIRLDLHQNRILSIPSSISGCCS---------------------------LAEFYMGN 239
           S L RL L  NR+ +IP S++ C +                           L++  M +
Sbjct: 284 SSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEXXFGIFSRAKVLSKLNMKD 343

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L++LP + G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G + 
Sbjct: 344 NQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLR 403

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            LR+L L  N L +L + +      A LK L+  +  N      TT    I   T L+  
Sbjct: 404 KLRELDLEENKLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT-- 452

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
              L L    L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 453 --HLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 500



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 136/292 (46%), Gaps = 11/292 (3%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NR+ ++   I     L    
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRMTTVEKDIKNLSKLIMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
            +++L +L L  N L  +  SL        L    + +        ST  E    + +R 
Sbjct: 282 NLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNI--------STLPEXXFGIFSRA 333

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            V SK L+++   L+++P +      + +L+L+ N + ++P ++S   SL+V
Sbjct: 334 KVLSK-LNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEV 384


>gi|393912071|gb|EJD76579.1| leucine-rich repeat-containing protein 1 [Loa loa]
          Length = 1426

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 153/302 (50%), Gaps = 17/302 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    + D+P E+ KN             + L+ L L+ N I +L   +  L  +T L
Sbjct: 88  LNLKGNDVSDLPEEI-KN------------CIQLKILDLSSNPITRLPPTISQLTSMTSL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+++P  IG+L  L+SL+V  N +  +P  I     L + D   N+L +LP+ +
Sbjct: 135 GLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPNEI 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL +     N + +LPE +  C  + +LDV  NKL +L +  I     L +L  S+
Sbjct: 195 SMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMLLPDE-IGDLEKLDDLTVSQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P +IG L +L  L   +N I  +  +I  C +L E Y+  N L+ +P+ LG L 
Sbjct: 254 NCLQVLPSSIGRLKKLSMLKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLK 313

Query: 254 KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            L TL+L  NQLKE    +  C   LSVL L +N +  LP EIG++  LR L +  N L 
Sbjct: 314 SLRTLNLDKNQLKELPPTIGGC-TSLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLN 372

Query: 312 TL 313
            L
Sbjct: 373 YL 374



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 180/378 (47%), Gaps = 29/378 (7%)

Query: 21  LRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL 80
           L+ +P+++ +N            A  L+++ L  N+I+ L + L     L +L++S N++
Sbjct: 25  LQSIPHDIDRN------------ARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEV 72

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
             LP+ I  L  L+ L++  N +  +P+EI +   L   D SSN +  LP ++ +  +++
Sbjct: 73  IRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMT 132

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               ++  +T +P D+     +  L+V  N L  +  + I+    L  L    N L+ +P
Sbjct: 133 SLGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVPPS-ISQLKQLRRLDLGHNELDDLP 191

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             I  L  L  L + QN + ++P SI  C SL +  +  N L  LP E+G L KL  L +
Sbjct: 192 NEISMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMLLPDEIGDLEKLDDLTV 251

Query: 261 HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             N L+       +L +LS+L    N+++ L P IG    L ++ LT N L  + SSL N
Sbjct: 252 SQNCLQVLPSSIGRLKKLSMLKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGN 311

Query: 320 GPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                 LK LR+  L +N+  E   T    I   T LSV    LSL    +  +P EI  
Sbjct: 312 ------LKSLRTLNLDKNQLKELPPT----IGGCTSLSV----LSLRDNLIEQLPLEIGR 357

Query: 379 AGEITKLDLSRNSIQELP 396
              +  LD+  N +  LP
Sbjct: 358 LENLRVLDVCNNRLNYLP 375



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 160/354 (45%), Gaps = 39/354 (11%)

Query: 56  NIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N++ +  D+ RN   L  + +  N + +L   +     LK L +S N ++++P +I   T
Sbjct: 24  NLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEVIRLPSDIAHLT 83

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L + +   N + +LP  +  C+ L     S+N IT LP  ++  + M+ L +    LT 
Sbjct: 84  YLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMTSLGLNDISLTQ 143

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           + ++ I     L  L   +NLL  +P +I  L +L RLDL  N +  +P+ IS   +L E
Sbjct: 144 MPHD-IGQLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPNEISMLENLEE 202

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 293
            Y+  N L ALP  +                        Q R L  LD+S N L  LP E
Sbjct: 203 LYVDQNDLEALPESI-----------------------VQCRSLEQLDVSENKLMLLPDE 239

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           IG +  L  L ++ N L+ L SS+      ++LK  R+ + +             +T A 
Sbjct: 240 IGDLEKLDDLTVSQNCLQVLPSSIGRLKKLSMLKADRNAITQ-------------LTPAI 286

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
                  E+ L    L+ IPS +     +  L+L +N ++ELPP +  C SL V
Sbjct: 287 GSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSV 340



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 138/339 (40%), Gaps = 65/339 (19%)

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           ++ ML     +  SI    D        +  DC  N +K+L   L RC  L     S N 
Sbjct: 14  QVDMLDRRQCNLQSIPHDIDRNARTLEEMYLDC--NHIKDLDKPLFRCRKLKILSLSENE 71

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +  LP D+A  + + +L+++GN ++ L                        PE I +  +
Sbjct: 72  VIRLPSDIAHLTYLEELNLKGNDVSDL------------------------PEEIKNCIQ 107

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  LDL  N I  +P +IS   S+    + + +L+ +P ++G+L  L +L++  N L+  
Sbjct: 108 LKILDLSSNPITRLPPTISQLTSMTSLGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTV 167

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                QL+ L  LDL +N L  LP EI  +  L +L +  N L  L  S+V         
Sbjct: 168 PPSISQLKQLRRLDLGHNELDDLPNEISMLENLEELYVDQNDLEALPESIVQ-------- 219

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
             RS                      +L V+  +L L       +P EI +  ++  L +
Sbjct: 220 -CRS--------------------LEQLDVSENKLML-------LPDEIGDLEKLDDLTV 251

Query: 388 SRNSIQELPPELSSCASLQVKFSD--LVTNKESCISGCY 424
           S+N +Q LP  +     L +  +D   +T     I  C+
Sbjct: 252 SQNCLQVLPSSIGRLKKLSMLKADRNAITQLTPAIGSCH 290


>gi|449678883|ref|XP_002165472.2| PREDICTED: protein scribble homolog, partial [Hydra magnipapillata]
          Length = 432

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 192/440 (43%), Gaps = 71/440 (16%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           IL+ A T   L+L    L D+P  +++                L++LILA N I+ L  D
Sbjct: 37  ILRHAGTLEELSLEGNQLTDLPKGIFR-------------MTKLRRLILADNEIQDLTND 83

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + +L  L  L+ S N +  +P +I     L  LD+S N++ ++PD +     L  +  + 
Sbjct: 84  ISSLIALEELDFSKNDVRVVPDSIQNCKKLTFLDISSNTLGELPDSLTKLNQLKTWIAND 143

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
             L E+P  +G   NL   +   NCI  LP   +  SK+ +LD+ GN+L  L +  I   
Sbjct: 144 IALTEIPPEIGSLSNLVVLELRENCIKFLPLSFSFLSKLERLDLGGNELEELPDT-IGQL 202

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
           T L EL    N L  +P  IG L  L  LD+ +NRI  +P  IS   SL + +  +NAL 
Sbjct: 203 TCLIELWLDNNFLTTLPSEIGELKALQCLDVSENRIEELPEEISTLTSLTDLHCTSNALH 262

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
            LP  +G L KL  L +  N++ E   C+  C   L V+ LS N +  LP  IGK++ L 
Sbjct: 263 ELPQGIGCLIKLQILKVDQNEIDEITDCIGGCTNLLEVV-LSENVIEFLPAAIGKLSNLT 321

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L +  N L T    + N                                 T+LSV    
Sbjct: 322 LLNIDRNRLFTFPPEIGN--------------------------------CTKLSV---- 345

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS---------------SCASLQ 406
           LS     +  IP EI     +T L LS N ++ LP  +S               S   LQ
Sbjct: 346 LSARDNQIVKIPKEIGSCKSLTVLSLSGNKLESLPFAVSTLPLKALWLSQNQSQSVLKLQ 405

Query: 407 VKFSDLVTNKESCISGCYLY 426
           V+  ++ + K   I  C+L+
Sbjct: 406 VEDDEITSEK---ILTCFLF 422



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 151/340 (44%), Gaps = 39/340 (11%)

Query: 93  LKSLDVSFNSIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRC--------------- 136
           L  LD S  S+  + ++I   A  L +     NQL +LP  + R                
Sbjct: 20  LDYLDKSHCSLTTVTEDILRHAGTLEELSLEGNQLTDLPKGIFRMTKLRRLILADNEIQD 79

Query: 137 --------LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
                   + L +   S N +  +P+ + +C K++ LD+  N L  L ++L      L  
Sbjct: 80  LTNDISSLIALEELDFSKNDVRVVPDSIQNCKKLTFLDISSNTLGELPDSL-TKLNQLKT 138

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
            IA+   L  +P  IGSLS L+ L+L +N I  +P S S    L    +G N L  LP  
Sbjct: 139 WIANDIALTEIPPEIGSLSNLVVLELRENCIKFLPLSFSFLSKLERLDLGGNELEELPDT 198

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L+ L  L L +N L     E  +L+ L  LD+S N +  LP EI  +T+L  L  T 
Sbjct: 199 IGQLTCLIELWLDNNFLTTLPSEIGELKALQCLDVSENRIEELPEEISTLTSLTDLHCTS 258

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L   +       L+K    ++ +NE  E +    D I   T L     E+ L   
Sbjct: 259 NALHELPQGI-----GCLIKLQILKVDQNEIDEIT----DCIGGCTNL----LEVVLSEN 305

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +  +P+ I +   +T L++ RN +   PPE+ +C  L V
Sbjct: 306 VIEFLPAAIGKLSNLTLLNIDRNRLFTFPPEIGNCTKLSV 345


>gi|71981160|ref|NP_741391.2| Protein SOC-2, isoform b [Caenorhabditis elegans]
 gi|351065206|emb|CCD61152.1| Protein SOC-2, isoform b [Caenorhabditis elegans]
          Length = 558

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 200/403 (49%), Gaps = 38/403 (9%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L +  L +VP+ +YK     G  +  W         L +N I  + E + NL  L +
Sbjct: 145 TLDLRHNKLTEVPSVIYK----IGSLETLW---------LRYNRIVAVDEQIGNLSKLKM 191

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+V  NK+ ELP+AIG+L  L    VS+N + ++P+EIG   +L + D   N L ELP S
Sbjct: 192 LDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYS 251

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+ +NL       N I  +P +L  C ++ +  VE N L +L  NL+     +  +  S
Sbjct: 252 IGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLS 311

Query: 193 KNLLNGMPETIGSLSRLI---RLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAE 248
           +N L   P   G   + +    +++  N+I  IP  I S    L +  +  N L +LP +
Sbjct: 312 RNELTAFPA--GGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLD 369

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G  + +  L+L +NQLK    +  +L  L +L LSNN L  LP +IG +  LR+L L  
Sbjct: 370 MGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEE 429

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLE 365
           N L T+ + +        L++L         ++       ++T+   +    + ++L L 
Sbjct: 430 NELETVPTEI------GFLQHL---------TKLWVQSNKILTLPRSIGNLCSLQDLRLG 474

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQV 407
             NL+AIP EI     +  L L+ NS +  LP EL+ C SL++
Sbjct: 475 ENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEI 517



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 27/293 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF--NS 102
            L++ I+  N+++ L  +L   LP +  +N+S N+L+  PA  G    + ++ ++   N 
Sbjct: 280 QLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAG-GPQQFVSTVTINMEHNQ 338

Query: 103 IMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           I KIP  I S AT L K +   N+L  LP  +G   ++++   S N +  LPED+     
Sbjct: 339 ISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVN 398

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L +  N+L  L N  I +   L EL   +N L  +P  IG L  L +L +  N+IL+
Sbjct: 399 LEILVLSNNQLKKLPNQ-IGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILT 457

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 281
           +P SI   CSL +  +G N L+A+P E+G L  L +L L+ N                  
Sbjct: 458 LPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDN------------------ 499

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
              +SL  LP E+    +L  + +  +PL  +   +  G    +++YL+ + P
Sbjct: 500 ---SSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 549


>gi|391333506|ref|XP_003741154.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Metaseiulus occidentalis]
          Length = 608

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 208/518 (40%), Gaps = 121/518 (23%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEV----------YKNFD---EAGEGDKWWEAVDLQKL 50
           ++K+AR SG L L NR   ++P+ V           K+ D   +    D WW  + L KL
Sbjct: 33  LIKSARKSGQLALQNRGFTELPSVVCNLNNLSEQEVKSIDVTLDRASQDDWWTQMPLSKL 92

Query: 51  ILA-----------------------HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
            L                         NNI KL + + +L  L  LN+SHNK++ELP  +
Sbjct: 93  FLGSNRLTTLPPEIAQLEHLTILELQDNNISKLPQQMESLSNLIRLNLSHNKMTELPDCL 152

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
             L  L+ L +  N I  + D I S  +L   D S N+LKELP +            +NN
Sbjct: 153 CHLKDLRVLALHHNEIKSVSDNINSLLSLDDLDLSHNKLKELPDAFTFLSRTKKINLANN 212

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
           C+ +LP D+    ++  LD+  N LT L                        PE IG   
Sbjct: 213 CLEALPADMDSMIQLVLLDLSNNCLTKL------------------------PEAIGRCG 248

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLK 266
            L +L    NR+ ++P   S    L E  +  NA+          L  L  LDL SN+L 
Sbjct: 249 HLEQLVARHNRLETLPP-FSRENHLKELSVSFNAIKEFNVGHCEALVMLKILDLRSNKLA 307

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
               E   L+ L  LD+ NN L  LP  +G +  +  LL+ GNPLR++R  ++   T  L
Sbjct: 308 SLPEEIANLQSLERLDIGNNELKILPNSLGALNHINSLLVEGNPLRSIRQDILRRGTVYL 367

Query: 326 LKYLRSRLPEN----------------------------------EDSEASTTKEDLITM 351
           +KYLR RL E+                                   +   ST  E +I M
Sbjct: 368 MKYLRDRLKESPMQQKIRKSRGGDGQELVDSVDRFTLKSSKTLDFSNKALSTLDEKVIDM 427

Query: 352 A----------------------TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           A                       RL+    EL      L++IP  + +A  +  ++L  
Sbjct: 428 ACEDKINQLVLTRNIFVTVPDTLERLAQQLTELDFSFNKLTSIPPFLSQAKHLQYMNLQS 487

Query: 390 NSIQELPPELSSCASLQVKFSDLVTNKESCISGCYLYW 427
           N + +LPPELS   +  ++  ++  N+ S I  C   W
Sbjct: 488 NQLSDLPPELSCLEN--IRELNISQNRFSKIPDCVYGW 523



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 156/359 (43%), Gaps = 72/359 (20%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMK 105
           L++L+  HN +E L    R    L  L+VS N + E      E L MLK LD+  N +  
Sbjct: 250 LEQLVARHNRLETLPPFSRE-NHLKELSVSFNAIKEFNVGHCEALVMLKILDLRSNKLAS 308

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED---------- 155
           +P+EI +  +L + D  +N+LK LP+SLG   +++      N + S+ +D          
Sbjct: 309 LPEEIANLQSLERLDIGNNELKILPNSLGALNHINSLLVEGNPLRSIRQDILRRGTVYLM 368

Query: 156 --LADCSKMS------------------------------KLDVEGNKLTVLSNNLI--A 181
             L D  K S                               LD     L+ L   +I  A
Sbjct: 369 KYLRDRLKESPMQQKIRKSRGGDGQELVDSVDRFTLKSSKTLDFSNKALSTLDEKVIDMA 428

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
               + +L+ ++N+   +P+T+  L++ L  LD   N++ SIP  +S    L    + +N
Sbjct: 429 CEDKINQLVLTRNIFVTVPDTLERLAQQLTELDFSFNKLTSIPPFLSQAKHLQYMNLQSN 488

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQL----------------------- 275
            LS LP EL  L  +  L++  N+  +   CV   +                        
Sbjct: 489 QLSDLPPELSCLENIRELNISQNRFSKIPDCVYGWKRFEILLASDNSLTSIDVENLAKIE 548

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            L+ LDL NNS+S +PPE+G +  ++ L L GN  R  R +++   T  +L YLR R+P
Sbjct: 549 TLATLDLRNNSISQVPPELGNLIQIKSLQLDGNLFRNPRPAILAKSTQDILAYLRDRIP 607


>gi|24215150|ref|NP_712631.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074468|ref|YP_005988785.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196220|gb|AAN49649.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458257|gb|AER02802.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 633

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 176/380 (46%), Gaps = 23/380 (6%)

Query: 33  DEAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
           DE G      EA+    +++ L L+  N   L +++  L  L  L++  N+L+  PA I 
Sbjct: 34  DEPGTYRDLTEALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIV 93

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           EL  L+SLD+S N ++ +P+EIG    L +     N+L   P  +G+  NL      +N 
Sbjct: 94  ELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQ 153

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           + +LP ++     + KL++  N+LTVL    I     L  L    N L  +P  IG L  
Sbjct: 154 LATLPVEIGQLQNLEKLNLRKNRLTVLPKE-IGQLQNLQTLNLQDNQLATLPVEIGQLQN 212

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L L +N++ + P  I    +L E  +  N L+ALP E+G+L  L  L+L  NQL  +
Sbjct: 213 LQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTF 272

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL +L  L L  N L+  P EIG++  L+ L L  N  +T+   +          
Sbjct: 273 PKEIGQLKKLRDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQ-------- 324

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKL 385
                       + + +   L T+   +    K  +LSL    L+ +P EI +   +  L
Sbjct: 325 -------LKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNL 377

Query: 386 DLSRNSIQELPPELSSCASL 405
           DL  N +  LP E+    +L
Sbjct: 378 DLGTNQLTTLPKEIGQLKNL 397



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 185/427 (43%), Gaps = 48/427 (11%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKL---ILAHNNIEKLKED 63
           LNLS ++   +P E+   KN  E   GD          V+LQKL    L+ N +  L  +
Sbjct: 55  LNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 114

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL   P  IG+L  L++L++  N +  +P EIG    L K +   
Sbjct: 115 IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 174

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  +G+  NL      +N + +LP ++     +  L +  N+LT      I   
Sbjct: 175 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKE-IGQL 233

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL    N L  +P+ IG L  L  L+L +N++ + P  I     L +  +G N L+
Sbjct: 234 ENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLRDLGLGRNQLT 293

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYC-----------------------VEACQL-RLSV 279
             P E+G+L  L  LDL  NQ K                           E  QL +L  
Sbjct: 294 TFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQD 353

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L  N L+ LP EIG++  L  L L  N L TL   +        LK L + L    + 
Sbjct: 354 LSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEI------GQLKNLYN-LGLGRNQ 406

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            A+  KE  I     L    +EL L    L+A+P EI +   +  L+LS N +   P E+
Sbjct: 407 LATFPKE--IGQLENL----QELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEI 460

Query: 400 SSCASLQ 406
                LQ
Sbjct: 461 GQLKKLQ 467



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 189/432 (43%), Gaps = 74/432 (17%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL +  L  +P E+              +  +L+KL L  N +  L +++  L  L  
Sbjct: 146 TLNLQDNQLATLPVEI-------------GQLQNLEKLNLRKNRLTVLPKEIGQLQNLQT 192

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ LP  IG+L  L++L +S N +   P EIG    L + +   N+L  LP  
Sbjct: 193 LNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKE 252

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------------- 179
           +G+  NL + + S N +T+ P+++    K+  L +  N+LT     +             
Sbjct: 253 IGQLKNLENLELSENQLTTFPKEIGQLKKLRDLGLGRNQLTTFPKEIGQLKNLQMLDLCY 312

Query: 180 ---------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
                    I     L +L  S N L  +P  IG L +L  L L +N++ ++P  I    
Sbjct: 313 NQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLK 372

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L    +G N L+ LP E+G+L  L  L L  NQL  +  E  QL  L  LDL NN L+ 
Sbjct: 373 NLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTA 432

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP EIG++  L  L L+ N L T    +        LK L                +DL 
Sbjct: 433 LPKEIGQLKNLENLELSENQLTTFPKEI------GQLKKL----------------QDLG 470

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
               RL +              +P EI +  ++  L LS N +  LP E+    +LQ+  
Sbjct: 471 LSYNRLVI--------------LPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQM-- 514

Query: 410 SDLVTNKESCIS 421
            DL  N+   +S
Sbjct: 515 LDLCYNQFKTVS 526



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 178/397 (44%), Gaps = 41/397 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L  ++  L  L  L +S N+L+  P  IG+L  L+ L++ +N +  
Sbjct: 189 NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTA 248

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   + S NQL   P  +G+   L D     N +T+ P+++     +  L
Sbjct: 249 LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLRDLGLGRNQLTTFPKEIGQLKNLQML 308

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+   +S   I     L +L  S N L  +P  IG L +L  L L +N++ ++P  
Sbjct: 309 DLCYNQFKTVSKE-IGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKE 367

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +G N L+ LP E+G+L  L  L L  NQL  +  E  QL  L  LDL N
Sbjct: 368 IGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWN 427

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL----LKYLRSRLPENEDSE 340
           N L+ LP EIG++  L  L L+ N L T    +  G    L    L Y R  +   E  +
Sbjct: 428 NRLTALPKEIGQLKNLENLELSENQLTTFPKEI--GQLKKLQDLGLSYNRLVILPKEIGQ 485

Query: 341 ASTTKEDLITMATRLSVTSKEL----SLEGMNL--------------------------- 369
                +DL     RL +  KE+    +L+ ++L                           
Sbjct: 486 LEKL-QDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQ 544

Query: 370 -SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            + +P+EI +   +  LDL  N +  LP E+    +L
Sbjct: 545 LATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNL 581



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 151/312 (48%), Gaps = 12/312 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEG--------DKWWEAVDLQKLILAHNNIEKLKE 62
           +L LS   L   P E+   K   + G G         +  +  +LQ L L +N  + + +
Sbjct: 261 NLELSENQLTTFPKEIGQLKKLRDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSK 320

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+S+N+L+ LPA IG+L  L+ L +  N +  +P EIG    L   D  
Sbjct: 321 EIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLG 380

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQL  LP  +G+  NL +     N + + P+++     + +LD+  N+LT L    I  
Sbjct: 381 TNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKE-IGQ 439

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L  S+N L   P+ IG L +L  L L  NR++ +P  I     L +  +  N L
Sbjct: 440 LKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRL 499

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
             LP E+G+L  L  LDL  NQ K    E      L  L+LS N L+ LP EIG++  L 
Sbjct: 500 VILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLY 559

Query: 302 KLLLTGNPLRTL 313
            L L  N L TL
Sbjct: 560 NLDLGTNQLTTL 571



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 164/358 (45%), Gaps = 19/358 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N +    +++  L  L  L +  N+L+  P  IG+L  L+ LD+ +N    
Sbjct: 258 NLENLELSENQLTTFPKEIGQLKKLRDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKT 317

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +  EIG    L++ + S NQL  LP+ +G+   L D     N +T+LP+++     +  L
Sbjct: 318 VSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNL 377

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L    I     L  L   +N L   P+ IG L  L  LDL  NR+ ++P  
Sbjct: 378 DLGTNQLTTLPKE-IGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKE 436

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    +L    +  N L+  P E+G+L KL  L L  N+L     E  QL +L  L LS 
Sbjct: 437 IGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSY 496

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L  LP EIG++  L+ L L  N  +T+   +                      + + +
Sbjct: 497 NRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQ---------------LKNLLQLNLS 541

Query: 345 KEDLITMATRLSVTSKELSLE-GMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
              L T+   +       +L+ G N L+ +P EI +   +  L L  N +  LP E+ 
Sbjct: 542 YNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 599



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 140/265 (52%), Gaps = 2/265 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N +  L +++  L  L  L++  N+L+ LP  IG+L  L +L +  N +   
Sbjct: 351 LQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATF 410

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L + D  +N+L  LP  +G+  NL + + S N +T+ P+++    K+  L 
Sbjct: 411 PKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLG 470

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L +L    I     L +L  S N L  +P+ IG L  L  LDL  N+  ++   I
Sbjct: 471 LSYNRLVILPKE-IGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEI 529

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L +  +  N L+ LPAE+G+L  L  LDL +NQL     E  QL+ L  L L  N
Sbjct: 530 GQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTN 589

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPL 310
            L+ LP EIG++  L+ LLL+ NP+
Sbjct: 590 QLTTLPKEIGQLKKLQWLLLSVNPI 614



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 140/305 (45%), Gaps = 35/305 (11%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           ++L  +L   LN+     S    T+LP+++     + +LD+  N+L      +I     L
Sbjct: 40  RDLTEALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFP-AVIVELQKL 98

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L  S+N L  +P  IG L  L  L L++N++++ P  I    +L    + +N L+ LP
Sbjct: 99  ESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLP 158

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+G+L  L  L+L  N+L     E  QL+ L  L+L +N L+ LP EIG++  L+ L L
Sbjct: 159 VEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGL 218

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL--- 362
           + N L T          P  +  L +              ++L     RL+   KE+   
Sbjct: 219 SENQLTTF---------PKEIGQLENL-------------QELNLKWNRLTALPKEIGQL 256

Query: 363 -SLEGMNLS-----AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
            +LE + LS       P EI +  ++  L L RN +   P E+    +LQ+   DL  N+
Sbjct: 257 KNLENLELSENQLTTFPKEIGQLKKLRDLGLGRNQLTTFPKEIGQLKNLQM--LDLCYNQ 314

Query: 417 ESCIS 421
              +S
Sbjct: 315 FKTVS 319


>gi|254390720|ref|ZP_05005933.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294812695|ref|ZP_06771338.1| Small GTP-binding protein [Streptomyces clavuligerus ATCC 27064]
 gi|197704420|gb|EDY50232.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294325294|gb|EFG06937.1| Small GTP-binding protein [Streptomyces clavuligerus ATCC 27064]
          Length = 395

 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 139/266 (52%), Gaps = 3/266 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N   +  + +  L  L VL++  N LS +P+ +G L  ++ L+++ N +  +
Sbjct: 110 LTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSV 169

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF-KASNNCITSLPEDLADCSKMSKL 165
           P EIG+ + L   D   N+L ++P SLG    LS +   S+N ITS+P+ L     +  L
Sbjct: 170 PAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYLYLSDNKITSVPDSLCRLGHLRYL 229

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT L          L EL    N L G+P +IG+L  L    L  NR+  +P  
Sbjct: 230 NITDNRLTALPER-FGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMGNRLTGLPEE 288

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I G   L E  + +N ++ALP  +G L +L  LDL +N+L+       +L RL+ LDL N
Sbjct: 289 IGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNNELRAVPDAIGRLDRLTHLDLRN 348

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L  LPP +  +  L KL L  NPL
Sbjct: 349 NRLHELPPTLAALPRLEKLDLRWNPL 374



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 150/340 (44%), Gaps = 44/340 (12%)

Query: 73  LNVSHNKLSELPAA---IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L+     +  LP A   I  L  L +LD+SFN +  +P ++G    L +    SNQ    
Sbjct: 64  LSAREQGMRSLPEALPEIARLEDLAALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRF 123

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P ++     L       N ++++P  L    ++  L++ GN+L+                
Sbjct: 124 PDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLS---------------- 167

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF-YMGNNALSALPAE 248
                    +P  IG+LSRL  LDL  N +  IP S+     L+ + Y+ +N ++++P  
Sbjct: 168 --------SVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYLYLSDNKITSVPDS 219

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           L +L  L  L++  N+L         L  L  L L +N L+GLP  IG +  LR+  L G
Sbjct: 220 LCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMG 279

Query: 308 NPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
           N L  L   +        L  LR  RL +N  +    T   L+ + TRL + + E     
Sbjct: 280 NRLTGLPEEIGG------LADLRELRLMDNRVTALPDTIGGLVRL-TRLDLRNNE----- 327

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             L A+P  I     +T LDL  N + ELPP L++   L+
Sbjct: 328 --LRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAALPRLE 365



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 26/211 (12%)

Query: 48  QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP 107
           + L L+ N I  + + L  L  L  LN++ N+L+ LP   G+L  L+ L +  N +  +P
Sbjct: 204 RYLYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLP 263

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
             IG+   L +     N+L  LP  +G   +L + +  +N +T+LP+ +    ++++LD+
Sbjct: 264 RSIGALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDL 323

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
             N+                        L  +P+ IG L RL  LDL  NR+  +P +++
Sbjct: 324 RNNE------------------------LRAVPDAIGRLDRLTHLDLRNNRLHELPPTLA 359

Query: 228 GCCSLAEFYMGNN--ALSALPAELGKLSKLG 256
               L +  +  N  AL  LPA +  L + G
Sbjct: 360 ALPRLEKLDLRWNPLALDPLPAWVSSLEQRG 390



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 70/136 (51%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           +++ +   L++L L HN +  L   +  L  L   ++  N+L+ LP  IG L  L+ L +
Sbjct: 241 ERFGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMGNRLTGLPEEIGGLADLRELRL 300

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N +  +PD IG    L + D  +N+L+ +P ++GR   L+     NN +  LP  LA 
Sbjct: 301 MDNRVTALPDTIGGLVRLTRLDLRNNELRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAA 360

Query: 159 CSKMSKLDVEGNKLTV 174
             ++ KLD+  N L +
Sbjct: 361 LPRLEKLDLRWNPLAL 376



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 15/172 (8%)

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           GK+  L   +     L E   E  +L  L+ LDLS N L  LP ++G++  L +L L  N
Sbjct: 59  GKVVSLSAREQGMRSLPEALPEIARLEDLAALDLSFNLLDDLPADLGRLHRLTELRLDSN 118

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
                  +++      +L   R+ L  N  S     +E             + L+L G  
Sbjct: 119 QFSRFPDAVLGLTGLQVLSLYRNGL-SNVPSGLGGLRE------------IRVLNLAGNR 165

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCI 420
           LS++P+EI     +  LDL  N + ++PP L     L  ++  L  NK + +
Sbjct: 166 LSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLS-RYLYLSDNKITSV 216


>gi|456982733|gb|EMG19248.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 299

 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 136/263 (51%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           + +N +  L +++  L  L  L +  N+L+ LP  IG+L  LKSL++S+N I  IP EI 
Sbjct: 1   MPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE 60

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL  LP  +G+  NL     S N +T+LP+++     +  LD+  N+
Sbjct: 61  KLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNR 120

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L    I     L EL    N L  +P  IG L  L  L+L  NR+ ++   I    +
Sbjct: 121 LTTLPQE-IGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQN 179

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + +N L+  P E+G+L  L  LDL SNQL        QL+ L  LDL +N L+ L
Sbjct: 180 LKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTL 239

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P EI ++  L+ L L+ N L+TL
Sbjct: 240 PQEIKQLKNLQLLDLSYNQLKTL 262



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 137/260 (52%), Gaps = 2/260 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + +++  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 41  NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 100

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   D S+N+L  LP  +G   NL +    +N +T LP ++     +  L
Sbjct: 101 LPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTL 160

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT LS   I     L  L    N L   P+ IG L  L  LDL  N++ ++P  
Sbjct: 161 NLRNNRLTTLSKE-IEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEG 219

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + +N L+ LP E+ +L  L  LDL  NQLK    E  QL+ L  L L  
Sbjct: 220 IGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGY 279

Query: 285 NSLSGLPPEIGKMTTLRKLL 304
           N L+ LP EIG++  L+ L 
Sbjct: 280 NQLTVLPKEIGQLQNLKVLF 299



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 138/268 (51%), Gaps = 2/268 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N +  L +++  L  L  LN+S+N++  +P  I +L  L+SL +  N +  +
Sbjct: 19  LQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTL 78

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L   D S+N+L  LP  +G+  NL     S N +T+LP+++     + +L 
Sbjct: 79  PQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELY 138

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT+L N  I     L  L    N L  + + I  L  L  LDL  N++   P  I
Sbjct: 139 LVSNQLTILPNE-IGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEI 197

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L    +G+N L+ LP  +G+L  L TLDL SNQL     E  QL+ L +LDLS N
Sbjct: 198 GQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYN 257

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L  LP EI ++  L+ L L  N L  L
Sbjct: 258 QLKTLPKEIEQLKNLQTLYLGYNQLTVL 285



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 156/336 (46%), Gaps = 38/336 (11%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S NQ+K +P  + 
Sbjct: 1   MPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE 60

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           +   L      NN +T+LP+++     +  LD+  N+LT L                   
Sbjct: 61  KLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL------------------- 101

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
                P+ IG L  L  LDL  NR+ ++P  I    +L E Y+ +N L+ LP E+G+L  
Sbjct: 102 -----PQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKN 156

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L TL+L +N+L     E  QL+ L  LDL +N L+  P EIG++  L+ L L  N L TL
Sbjct: 157 LQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTL 216

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                    P  +  L++    + DS   TT    I     L +    L L    L  +P
Sbjct: 217 ---------PEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQL----LDLSYNQLKTLP 263

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            EI +   +  L L  N +  LP E+    +L+V F
Sbjct: 264 KEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLF 299


>gi|71981152|ref|NP_001021259.1| Protein SOC-2, isoform a [Caenorhabditis elegans]
 gi|74966395|sp|Q22875.3|SHOC2_CAEEL RecName: Full=Leucine-rich repeat protein soc-2; AltName:
           Full=Suppressor of Clr protein 2; AltName:
           Full=Suppressor of activated let-60 Ras protein 8
 gi|3252977|gb|AAC39129.1| Ras-binding protein SUR-8 [Caenorhabditis elegans]
 gi|3293318|gb|AAC25697.1| leucine-rich repeat protein SOC-2 [Caenorhabditis elegans]
 gi|351065205|emb|CCD61151.1| Protein SOC-2, isoform a [Caenorhabditis elegans]
          Length = 559

 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 200/403 (49%), Gaps = 38/403 (9%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L +  L +VP+ +YK     G  +  W         L +N I  + E + NL  L +
Sbjct: 146 TLDLRHNKLTEVPSVIYK----IGSLETLW---------LRYNRIVAVDEQIGNLSKLKM 192

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+V  NK+ ELP+AIG+L  L    VS+N + ++P+EIG   +L + D   N L ELP S
Sbjct: 193 LDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYS 252

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+ +NL       N I  +P +L  C ++ +  VE N L +L  NL+     +  +  S
Sbjct: 253 IGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLS 312

Query: 193 KNLLNGMPETIGSLSRLI---RLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAE 248
           +N L   P   G   + +    +++  N+I  IP  I S    L +  +  N L +LP +
Sbjct: 313 RNELTAFPA--GGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLD 370

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G  + +  L+L +NQLK    +  +L  L +L LSNN L  LP +IG +  LR+L L  
Sbjct: 371 MGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEE 430

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLE 365
           N L T+ + +        L++L         ++       ++T+   +    + ++L L 
Sbjct: 431 NELETVPTEI------GFLQHL---------TKLWVQSNKILTLPRSIGNLCSLQDLRLG 475

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQV 407
             NL+AIP EI     +  L L+ NS +  LP EL+ C SL++
Sbjct: 476 ENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEI 518



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 27/293 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF--NS 102
            L++ I+  N+++ L  +L   LP +  +N+S N+L+  PA  G    + ++ ++   N 
Sbjct: 281 QLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAG-GPQQFVSTVTINMEHNQ 339

Query: 103 IMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           I KIP  I S AT L K +   N+L  LP  +G   ++++   S N +  LPED+     
Sbjct: 340 ISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVN 399

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L +  N+L  L N  I +   L EL   +N L  +P  IG L  L +L +  N+IL+
Sbjct: 400 LEILVLSNNQLKKLPNQ-IGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILT 458

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 281
           +P SI   CSL +  +G N L+A+P E+G L  L +L L+ N                  
Sbjct: 459 LPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDN------------------ 500

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
              +SL  LP E+    +L  + +  +PL  +   +  G    +++YL+ + P
Sbjct: 501 ---SSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 550


>gi|359727309|ref|ZP_09266005.1| hypothetical protein Lwei2_10285 [Leptospira weilii str.
           2006001855]
          Length = 455

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 184/378 (48%), Gaps = 21/378 (5%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + VLN+S+  L+  P  I +   LK LD+S N    +P EIG    L + 
Sbjct: 43  LNEALKNPTDVRVLNLSYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQEL 102

Query: 120 DCS-SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           + S +N   +LP  +GR  NL     S N +T+LP+++     + +L++  N L  L   
Sbjct: 103 NLSFNNNPIDLPQEIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQE 162

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I     L +L  S N L  +P+ IG L +L  L ++ NR+  +P  I    +L E  + 
Sbjct: 163 -IGRLQNLEQLNLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLY 221

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
           +N+L+ LP E+G+L K   L LH NQL       C+L+ L  + L  N L+ LP EIG++
Sbjct: 222 DNSLTTLPEEIGQLQKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQEIGQL 281

Query: 298 TTLRKLLLTGNPLRTLRSSL---VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
             L++L L+ N L+TL   +    N     L     + LP+      +    +L     +
Sbjct: 282 QNLQELHLSSNQLKTLPKEIEKLHNLQILNLNNNELTALPKEIGQLQNLYGLNL--KLNK 339

Query: 355 LSVTSKEL-SLEGM--------NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           L++  KE+  L+ M         L+ +PSEI +  ++  L+LS NS+   P E+    +L
Sbjct: 340 LTILPKEIGQLQNMRDLDLSDNQLTTLPSEIGQLKKLHSLNLSGNSLTSFPKEIGKLQNL 399

Query: 406 QV----KFSDLVTNKESC 419
           +        DL+  KE  
Sbjct: 400 KFLRLRGIPDLIPQKEKI 417



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/266 (34%), Positives = 143/266 (53%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L+ N +  L +++  L  L  LN+S N L +LP  IG L  L+ L++S N +  
Sbjct: 122 NLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIGRLQNLEQLNLSGNRLTT 181

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L     + N+L  LP  +G+  NL +    +N +T+LPE++    K  +L
Sbjct: 182 LPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLYDNSLTTLPEEIGQLQKFKQL 241

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L   L      L  +   +N L  +P+ IG L  L  L L  N++ ++P  
Sbjct: 242 VLHENQLTTLPQGL-CKLQNLERIYLHQNRLTSLPQEIGQLQNLQELHLSSNQLKTLPKE 300

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + NN L+ALP E+G+L  L  L+L  N+L     E  QL+ +  LDLS+
Sbjct: 301 IEKLHNLQILNLNNNELTALPKEIGQLQNLYGLNLKLNKLTILPKEIGQLQNMRDLDLSD 360

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP EIG++  L  L L+GN L
Sbjct: 361 NQLTTLPSEIGQLKKLHSLNLSGNSL 386



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 69/124 (55%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N ++ L +++  L  L +LN+++N+L+ LP  IG+L  L  L++  N +  
Sbjct: 283 NLQELHLSSNQLKTLPKEIEKLHNLQILNLNNNELTALPKEIGQLQNLYGLNLKLNKLTI 342

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    +   D S NQL  LPS +G+   L     S N +TS P+++     +  L
Sbjct: 343 LPKEIGQLQNMRDLDLSDNQLTTLPSEIGQLKKLHSLNLSGNSLTSFPKEIGKLQNLKFL 402

Query: 166 DVEG 169
            + G
Sbjct: 403 RLRG 406


>gi|392966514|ref|ZP_10331933.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
           3]
 gi|387845578|emb|CCH53979.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
           3]
          Length = 925

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 86/222 (38%), Positives = 128/222 (57%), Gaps = 2/222 (0%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S  ++  +P+ IG  T L +     NQL  LP S+G+   L+     +N +  LPE 
Sbjct: 23  LDLSGLNLSSLPESIGQLTQLTRLYLYDNQLTILPESIGQLTQLTRLSLHDNQLAVLPES 82

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           ++  ++++ L +  N+L VL  + I+  T LTEL  S N L  +PE+IG L++L RLDLH
Sbjct: 83  ISQLTQLTSLSLHDNQLAVLPES-ISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLH 141

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N++  +P SI     L    + NN L+ LP  +G+L++L  LDL +NQL +      QL
Sbjct: 142 TNQLTVLPESIGQLTQLTRLDLSNNQLTDLPESIGQLTQLTELDLPNNQLTDLPESIGQL 201

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
            +L+ LDL NN L+ LP  IG++T LR+L L  N L  L  S
Sbjct: 202 TQLTELDLRNNELTTLPESIGQLTQLRELSLHTNELTVLPKS 243



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/200 (36%), Positives = 109/200 (54%), Gaps = 1/200 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N +  L E +  L  LT L++  N+L+ LP +I +L  L SL +  N +  +
Sbjct: 43  LTRLYLYDNQLTILPESIGQLTQLTRLSLHDNQLAVLPESISQLTQLTSLSLHDNQLAVL 102

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ I   T L + D S+NQL  LP S+G+   L+      N +T LPE +   +++++LD
Sbjct: 103 PESISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLHTNQLTVLPESIGQLTQLTRLD 162

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT L  + I   T LTEL    N L  +PE+IG L++L  LDL  N + ++P SI
Sbjct: 163 LSNNQLTDLPES-IGQLTQLTELDLPNNQLTDLPESIGQLTQLTELDLRNNELTTLPESI 221

Query: 227 SGCCSLAEFYMGNNALSALP 246
                L E  +  N L+ LP
Sbjct: 222 GQLTQLRELSLHTNELTVLP 241



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 109/203 (53%), Gaps = 1/203 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N +  L E +  L  LT L++  N+L+ LP +I +L  L  LD+S N +  +
Sbjct: 66  LTRLSLHDNQLAVLPESISQLTQLTSLSLHDNQLAVLPESISQLTQLTELDLSTNQLTVL 125

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ IG    L + D  +NQL  LP S+G+   L+    SNN +T LPE +   +++++LD
Sbjct: 126 PESIGQLNQLTRLDLHTNQLTVLPESIGQLTQLTRLDLSNNQLTDLPESIGQLTQLTELD 185

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT L  + I   T LTEL    N L  +PE+IG L++L  L LH N +  +P S+
Sbjct: 186 LPNNQLTDLPES-IGQLTQLTELDLRNNELTTLPESIGQLTQLRELSLHTNELTVLPKSL 244

Query: 227 SGCCSLAEFYMGNNALSALPAEL 249
                L    +  N    +P E+
Sbjct: 245 QHLTLLRLLDLRGNTDLGIPPEV 267



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 142/276 (51%), Gaps = 20/276 (7%)

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           ++K   S L   L+LS        ++SLPE +   +++++L +  N+LT+L  + I   T
Sbjct: 11  RIKNTRSKLSEILDLSGLN-----LSSLPESIGQLTQLTRLYLYDNQLTILPES-IGQLT 64

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            LT L    N L  +PE+I  L++L  L LH N++  +P SIS    L E  +  N L+ 
Sbjct: 65  QLTRLSLHDNQLAVLPESISQLTQLTSLSLHDNQLAVLPESISQLTQLTELDLSTNQLTV 124

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP  +G+L++L  LDLH+NQL        QL +L+ LDLSNN L+ LP  IG++T L +L
Sbjct: 125 LPESIGQLNQLTRLDLHTNQLTVLPESIGQLTQLTRLDLSNNQLTDLPESIGQLTQLTEL 184

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L  L  S+       L +     L  NE     TT  + I   T+L    +ELS
Sbjct: 185 DLPNNQLTDLPESI-----GQLTQLTELDLRNNE----LTTLPESIGQLTQL----RELS 231

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           L    L+ +P  +     +  LDL  N+   +PPE+
Sbjct: 232 LHTNELTVLPKSLQHLTLLRLLDLRGNTDLGIPPEV 267



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 40/228 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L+ +PE+IG L++L RL L+ N++  +P SI     L    + +N L+ LP  + +L++L
Sbjct: 30  LSSLPESIGQLTQLTRLYLYDNQLTILPESIGQLTQLTRLSLHDNQLAVLPESISQLTQL 89

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            +L LH NQL        QL +L+ LDLS N L+ LP  IG++  L +L L  N L  L 
Sbjct: 90  TSLSLHDNQLAVLPESISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLHTNQLTVLP 149

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
            S+                               +T  TRL +++ +L+        +P 
Sbjct: 150 ESIGQ-----------------------------LTQLTRLDLSNNQLT-------DLPE 173

Query: 375 EIWEAGEITKLDLSRNSIQELPP---ELSSCASLQVKFSDLVTNKESC 419
            I +  ++T+LDL  N + +LP    +L+    L ++ ++L T  ES 
Sbjct: 174 SIGQLTQLTELDLPNNQLTDLPESIGQLTQLTELDLRNNELTTLPESI 221



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 15/138 (10%)

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
           +LDLS  +LS LP  IG++T L +L L  N L  L  S+       L +  R  L +N+ 
Sbjct: 22  ILDLSGLNLSSLPESIGQLTQLTRLYLYDNQLTILPESI-----GQLTQLTRLSLHDNQL 76

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           +    +    I+  T+L+     LSL    L+ +P  I +  ++T+LDLS N +  LP  
Sbjct: 77  AVLPES----ISQLTQLT----SLSLHDNQLAVLPESISQLTQLTELDLSTNQLTVLPES 128

Query: 399 LSSCASLQVKFSDLVTNK 416
           +      Q+   DL TN+
Sbjct: 129 IGQLN--QLTRLDLHTNQ 144


>gi|124006408|ref|ZP_01691242.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988065|gb|EAY27736.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 399

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 140/269 (52%), Gaps = 2/269 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L+ L L HN +  L E +  L  L +LN+ HN L ELP +I +L  LKSL ++ N 
Sbjct: 113 ELDHLEDLWLDHNQLTVLPESIGKLEHLGILNLGHNDLIELPESISKLQNLKSLYLNKNK 172

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P+ IG    L   D  SN+L+ +P  +G+  NL       N +  +PE + +   +
Sbjct: 173 LAVLPESIGLLQNLQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGNHLAVVPESIGELEHL 232

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            +L +  N+LT L  + IA    L +L    N L G+P   G L  L  ++L  NRI + 
Sbjct: 233 KELHLSHNRLTFLPAS-IAQLKTLKDLYLLYNKLTGLPPGFGKLQHLKDINLSHNRITTF 291

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P +I+    L    + +N L++LPA +G L +L  L L+ NQL +      +L  L+ L 
Sbjct: 292 PIAITKLTQLKSLALDSNQLTSLPANVGNLEQLEVLSLNDNQLIKLPKSIGKLTNLTTLS 351

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L NN L+ +P EI  +  L  L+L GNP+
Sbjct: 352 LINNKLTDVPIEIQNLPNLEYLVLEGNPI 380



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 162/363 (44%), Gaps = 38/363 (10%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKL 50
           M   LK       LN+SN+ L  +P  + +       G      E +         L++L
Sbjct: 15  MKDALKNPEAVHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKLQQLEEL 74

Query: 51  ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI 110
              HN++  L E +  L  L  L ++HN L++LP +IGEL  L+ L +  N +  +P+ I
Sbjct: 75  WFNHNHLHTLPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHNQLTVLPESI 134

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           G    L   +   N L ELP S+ +  NL     + N +  LPE +     +  LD + N
Sbjct: 135 GKLEHLGILNLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQSN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +L  +    I     L  L    N L  +PE+IG L  L  L L  NR+  +P+SI+   
Sbjct: 195 RLQSIPEE-IGQLKNLKYLSVDGNHLAVVPESIGELEHLKELHLSHNRLTFLPASIAQLK 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSN-------------QLKEYCVEACQL-- 275
           +L + Y+  N L+ LP   GKL  L  ++L  N             QLK   +++ QL  
Sbjct: 254 TLKDLYLLYNKLTGLPPGFGKLQHLKDINLSHNRITTFPIAITKLTQLKSLALDSNQLTS 313

Query: 276 ---------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                    +L VL L++N L  LP  IGK+T L  L L  N L  +   + N P    L
Sbjct: 314 LPANVGNLEQLEVLSLNDNQLIKLPKSIGKLTNLTTLSLINNKLTDVPIEIQNLPN---L 370

Query: 327 KYL 329
           +YL
Sbjct: 371 EYL 373



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 166/361 (45%), Gaps = 43/361 (11%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           +K+ L+N   +  LN+S+ +L+ LP  I  L  L  L VS N I  +P  I     L + 
Sbjct: 15  MKDALKNPEAVHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKLQQLEEL 74

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
             + N L  LP S+G+   L +   ++N +T LPE + +   +  L ++ N+LTVL    
Sbjct: 75  WFNHNHLHTLPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHNQLTVL---- 130

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
                               PE+IG L  L  L+L  N ++ +P SIS   +L   Y+  
Sbjct: 131 --------------------PESIGKLEHLGILNLGHNDLIELPESISKLQNLKSLYLNK 170

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L+ LP  +G L  L  LD  SN+L+    E  QL+ L  L +  N L+ +P  IG++ 
Sbjct: 171 NKLAVLPESIGLLQNLQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGNHLAVVPESIGELE 230

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--------------NEDSEASTT 344
            L++L L+ N L  L +S+    T   L  L ++L                N      TT
Sbjct: 231 HLKELHLSHNRLTFLPASIAQLKTLKDLYLLYNKLTGLPPGFGKLQHLKDINLSHNRITT 290

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               IT  T+L    K L+L+   L+++P+ +    ++  L L+ N + +LP  +    +
Sbjct: 291 FPIAITKLTQL----KSLALDSNQLTSLPANVGNLEQLEVLSLNDNQLIKLPKSIGKLTN 346

Query: 405 L 405
           L
Sbjct: 347 L 347


>gi|418753822|ref|ZP_13310061.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
 gi|409965822|gb|EKO33680.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
          Length = 326

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 148/295 (50%), Gaps = 29/295 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L LA N ++ L +++  L  L  L++ +N+L+ LP  IG L  L+ L+++ N    +
Sbjct: 21  LQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTL 80

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EIG+   L K   + ++L  LP  +G   NL +   ++N  T+LPE++ +  K+  LD
Sbjct: 81  PEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLD 140

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  ++LT L    I     L +L   KN L  +P+ IG L  L  L L+ N + ++P  I
Sbjct: 141 LNYSRLTTLPKE-IGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEI 199

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC----------------- 269
               +L E  +G+N L+ LP ++G L KL  L L  N+LK                    
Sbjct: 200 GNLQNLQELSLGSNQLTTLPEKIGNLQKLQELSLAGNRLKTLPKEIGNLQNLQELNLNNN 259

Query: 270 --------VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
                   +E  Q  L  L+LS NSL   P EIGK+  L+ L L GNP   LRS 
Sbjct: 260 QLTTLPKEIENLQ-SLESLNLSGNSLISFPEEIGKLQKLKWLYLGGNPF--LRSQ 311



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 135/284 (47%), Gaps = 42/284 (14%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S N +  +P EIG+   L   D + NQLK LP  + +   L      NN +T+LP++
Sbjct: 1   LDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKE 60

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           + +   + +L++  N+ T L                        PE IG+L +L +L L 
Sbjct: 61  IGNLQNLQELNLNSNQFTTL------------------------PEEIGNLQKLQKLSLA 96

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            +R+ ++P  I    +L E  + +N  + LP E+G L KL TLDL+ ++L     E  +L
Sbjct: 97  HSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKL 156

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
            +L  L+L  N L  LP EIGK+  L+ L L GN L TL   + N      L+ L+    
Sbjct: 157 QKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGN------LQNLQ---- 206

Query: 335 ENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEI 376
                E S     L T+  ++    K  ELSL G  L  +P EI
Sbjct: 207 -----ELSLGSNQLTTLPEKIGNLQKLQELSLAGNRLKTLPKEI 245



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 140/272 (51%), Gaps = 11/272 (4%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +L+L N  L  +P E+   +N  E       +  +         LQKL LAH+ +  L +
Sbjct: 46  ALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPK 105

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++ NL  L  LN++ N+ + LP  IG L  L++LD++++ +  +P EIG    L K +  
Sbjct: 106 EIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLY 165

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQLK LP  +G+  NL +   + N +T+LP+++ +   + +L +  N+LT L    I +
Sbjct: 166 KNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEK-IGN 224

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L EL  + N L  +P+ IG+L  L  L+L+ N++ ++P  I    SL    +  N+L
Sbjct: 225 LQKLQELSLAGNRLKTLPKEIGNLQNLQELNLNNNQLTTLPKEIENLQSLESLNLSGNSL 284

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
            + P E+GKL KL  L L  N       E  Q
Sbjct: 285 ISFPEEIGKLQKLKWLYLGGNPFLRSQKEKIQ 316



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 17/129 (13%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LDLS+N L+ LP EIG +  L+ L L  N L+TL   +       L K     L  NE  
Sbjct: 1   LDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEI-----EKLQKLEALHLGNNE-- 53

Query: 340 EASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                   L T+   +      +EL+L     + +P EI    ++ KL L+ + +  LP 
Sbjct: 54  --------LTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPK 105

Query: 398 ELSSCASLQ 406
           E+ +  +LQ
Sbjct: 106 EIGNLQNLQ 114


>gi|417765306|ref|ZP_12413270.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352488|gb|EJP04673.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 405

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 143/269 (53%), Gaps = 2/269 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L  N ++ L +++  L  L  LN+S N+L+ LP  IG+L  L+ LD+  N +  
Sbjct: 72  NLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L     SSNQL  LP   G+  NL +   S+N +T+LP+++     +  L
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ N+LT L    I     L  L  S N L  +P  IG L  L  L+L  N++ ++P  
Sbjct: 192 NLKSNQLTTLFKE-IEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIE 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +  N L+ L  E+GKL  L  L+LHSNQL     E  QL+ L  L LS 
Sbjct: 251 IGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSY 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N L  LP EIG++  L++L L  N L  L
Sbjct: 311 NRLVILPKEIGQLQNLQELNLWNNQLTAL 339



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 162/341 (47%), Gaps = 19/341 (5%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S    + LP  I +L  L+ L +  N +  +P EIG    L + + SSNQL  LP 
Sbjct: 52  VLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL      +N +T LP ++     +  L +  N+LT L          L EL  
Sbjct: 112 EIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE-SGKLENLQELNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P+ IG L  L  L+L  N++ ++   I    +L    + +N L+ LP E+GK
Sbjct: 171 SDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGK 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL+L  NQL    +E  +L+ L  L+LS N L+ L  EIGK+  L+ L L  N L
Sbjct: 231 LQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQL 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMN 368
            TL   +        LK L++          S +   L+ +   +      +EL+L    
Sbjct: 291 TTLSKEIEQ------LKNLQT---------LSLSYNRLVILPKEIGQLQNLQELNLWNNQ 335

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           L+A+P EI +   +  L L +N +   P E+    +LQ  +
Sbjct: 336 LTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLY 376



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 109/225 (48%), Gaps = 14/225 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L  +P E+              +  +LQ L L  N +  L +++  L  L  L
Sbjct: 168 LNLSDNQLTTLPQEI-------------GQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTL 214

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S N+L+ LP  IG+L  L +L++S N +  +P EIG    L   + S NQL  L   +
Sbjct: 215 NLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI 274

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL D    +N +T+L +++     +  L +  N+L +L    I     L EL    
Sbjct: 275 GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKE-IGQLQNLQELNLWN 333

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
           N L  +P  IG L  L  L L++NR+++ P  I    +L   Y+G
Sbjct: 334 NQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLG 378



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 140/323 (43%), Gaps = 53/323 (16%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+ +     + KL +  N+L  L    I     L 
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKE-IGQLKNLQ 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY----------- 236
           EL  S N L  +P+ IG L  L RLDL+ NR+  +P  I    +L   Y           
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 237 ------------MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
                       + +N L+ LP E+G+L  L TL+L SNQL     E  QL+ L  L+LS
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           +N L+ LP EIGK+  L  L L+ N L TL         P  +  L++    N      T
Sbjct: 218 DNQLTTLPIEIGKLQNLHTLNLSDNQLTTL---------PIEIGKLQNLHTLNLSGNQLT 268

Query: 344 T----------KEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITK 384
           T           +DL   + +L+  SKE         LSL    L  +P EI +   + +
Sbjct: 269 TLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQE 328

Query: 385 LDLSRNSIQELPPELSSCASLQV 407
           L+L  N +  LP E+    +LQ 
Sbjct: 329 LNLWNNQLTALPIEIGQLQNLQT 351



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 1/215 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N +  L +++  L  L  LN+  N+L+ L   I +L  L++L++S N +  
Sbjct: 164 NLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTT 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   + S NQL  LP  +G+  NL     S N +T+L  ++     +  L
Sbjct: 224 LPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT LS   I     L  L  S N L  +P+ IG L  L  L+L  N++ ++P  
Sbjct: 284 NLHSNQLTTLSKE-IEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 342

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           I    +L    +  N L   P E+G+L  L TL L
Sbjct: 343 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYL 377



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 236 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSGNQLTTLSIEIGKLQNLQD 282

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ L   I +L  L++L +S+N ++ +P EIG    L + +  +NQL  LP  
Sbjct: 283 LNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 342

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           +G+  NL       N + + P+++     +  L + G+
Sbjct: 343 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 380


>gi|421116143|ref|ZP_15576532.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012309|gb|EKO70411.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 356

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 90/243 (37%), Positives = 131/243 (53%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  I +L  LKSLD++ N    +P EIG    L + +  +NQLK LP 
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     S N +T+ P+++     + KL+++ N+LT L    I     L +L  
Sbjct: 112 EIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQE-IGQLQSLQKLNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            KN L  +P  IG L  L  L L  N++  +P  I    +L    +G+N L+ LP E+G+
Sbjct: 171 DKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQ 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L   +N+L     E  QL +L  L LS+N L+ LP EIG++  L++L L  N L
Sbjct: 231 LQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQL 290

Query: 311 RTL 313
            TL
Sbjct: 291 TTL 293



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 148/285 (51%), Gaps = 15/285 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           +K  +   SL+L+N   + +P E+              +  +LQ+L L +N ++ L +++
Sbjct: 67  IKQLQNLKSLDLANNQFKTLPKEI-------------GQLQNLQELNLWNNQLKNLPKEI 113

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L +S N+L+  P  IG+L  L+ L++ +N +  +  EIG   +L K +   N
Sbjct: 114 GQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKN 173

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +LK LP+ +G+  NL +   SNN +T LPE++     +  L +  N+LT+L    I    
Sbjct: 174 RLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKE-IGQLQ 232

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L +  N L  +P+ IG L +L  L L  N++ ++P  I    +L E Y+ +N L+ 
Sbjct: 233 NLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTT 292

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           LP E+G+L  L T    +NQL     E  QL+ L  L L+NN LS
Sbjct: 293 LPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLS 337



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 137/270 (50%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L ++++ L  L  L++++N+   LP  IG+L  L+ L++  N + 
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     S N+L   P  +G+  NL       N +T+L +++     + K
Sbjct: 108 NLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L+++ N+L  L N  I     L EL  S N L  +PE IG L  L  L L  N++  +P 
Sbjct: 168 LNLDKNRLKALPNE-IGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPK 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   Y  NN L+ LP E+G+L KL  L L  NQL     E  QL  L  L L+
Sbjct: 227 EIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLN 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +N L+ LP EIG++  L+  +   N L  L
Sbjct: 287 DNQLTTLPKEIGQLKNLQTFISFNNQLTML 316



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 94/216 (43%), Gaps = 37/216 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ I  L  L  LDL  N+  ++P  I    +L E  + NN L  LP E+G+L  L
Sbjct: 60  LTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNL 119

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            TL L  N+L  +  E  QL+ L  L+L  N L+ L  EIG++ +L+KL L  N L+ L 
Sbjct: 120 QTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKAL- 178

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                                NE  +    +E               L L    L+ +P 
Sbjct: 179 --------------------PNEIGQLQNLQE---------------LYLSNNQLTILPE 203

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFS 410
           EI +   +  L L  N +  LP E+    +L++ +S
Sbjct: 204 EIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYS 239



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 37/196 (18%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L+L   ++ ++P  I    +L    + NN    LP E+G+L  L  L+L +NQLK    E
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L  L LS N L+  P EIG++  L+KL L  N L TL   +  G   +L     
Sbjct: 113 IGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI--GQLQSL----- 165

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                                        ++L+L+   L A+P+EI +   + +L LS N
Sbjct: 166 -----------------------------QKLNLDKNRLKALPNEIGQLQNLQELYLSNN 196

Query: 391 SIQELPPELSSCASLQ 406
            +  LP E+    +LQ
Sbjct: 197 QLTILPEEIGQLKNLQ 212


>gi|260788682|ref|XP_002589378.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
 gi|229274555|gb|EEN45389.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
          Length = 1059

 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 188/422 (44%), Gaps = 56/422 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN+ L  +P EV+             +  DL+ L +++N I  + E +  L  L  L
Sbjct: 18  LDLSNQGLTSIPEEVF-------------DITDLEILDVSNNKIISIPEAICRLQKLYRL 64

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +   N L+ LP AI  L  LK L V  N++ ++PD +     L       N+L +LP+ +
Sbjct: 65  DAYSNMLTSLPQAISSLQGLKKLYVHSNNLSELPDGLEDLQKLEWLWVKDNKLTKLPTKI 124

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
             CLNL +F ASNN +++ P  +    K+ +L + GN+LT + +  + S   L EL  S 
Sbjct: 125 FSCLNLVNFDASNNKLSAFPPGVEKLQKLRELYIYGNQLTEVPSG-VCSLPNLEELDVSN 183

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L+  P  +  L +L  L +  N++  +PS +     L    +GNN LSA P  + KL 
Sbjct: 184 NKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKLSAFPPGVEKLQ 243

Query: 254 KLGTLDLHS----------------------------NQLKEYCVEACQL-RLSVLDLSN 284
           KL  L ++                             NQL E     C L  L +L + N
Sbjct: 244 KLRELYIYGVKCHNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGN 303

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N LS  PP + K+  LRKL + GN L  + SS+ + P   +L    ++L     S     
Sbjct: 304 NKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKL-----STFPPG 358

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
            E L  +        +EL ++   L+ +PS +     +  L +  N +   PP +     
Sbjct: 359 VEKLQKL--------RELYIQDNQLTEVPSGVCSLPHLEVLSVYNNKLSTFPPGVEKLQK 410

Query: 405 LQ 406
           L+
Sbjct: 411 LR 412



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 169/366 (46%), Gaps = 20/366 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L +  N + ++   + +LP L  L+VS+NKLS  P  + +L  L+ L +  N + ++
Sbjct: 153 LRELYIYGNQLTEVPSGVCSLPNLEELDVSNNKLSTFPPGVEKLQKLRELYIQDNQLTEV 212

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLG-----RCLNLSDFKASNNCITSLPEDLADCSK 161
           P  + S   L      +N+L   P  +      R L +   K  NN +++ P  +    K
Sbjct: 213 PSGVCSLPHLELLTVGNNKLSAFPPGVEKLQKLRELYIYGVKCHNNKLSTFPPGVEKLQK 272

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           + +L ++ N+LT + +  + S   L  L    N L+  P  +  L +L +L ++ N++  
Sbjct: 273 LRELYIQDNQLTEVPSG-VCSLPHLELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTE 331

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 280
           +PSS+    +L    + NN LS  P  + KL KL  L +  NQL E     C L  L VL
Sbjct: 332 VPSSVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLEVL 391

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
            + NN LS  PP + K+  LR+L +  N L  + S + + P   LL    ++L     S+
Sbjct: 392 SVYNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKL-----SK 446

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                E L  +        ++L + G  L+ +PS +     +  L +  N +   PP + 
Sbjct: 447 FPPGVEKLQKL--------RKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLSTFPPGVE 498

Query: 401 SCASLQ 406
               L+
Sbjct: 499 KLQKLK 504



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 139/297 (46%), Gaps = 20/297 (6%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           +K D S+  L  +P  +    +L     SNN I S+PE +    K+ +LD   N LT L 
Sbjct: 16  LKLDLSNQGLTSIPEEVFDITDLEILDVSNNKIISIPEAICRLQKLYRLDAYSNMLTSLP 75

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
              I+S   L +L    N L+ +P+ +  L +L  L +  N++  +P+ I  C +L  F 
Sbjct: 76  -QAISSLQGLKKLYVHSNNLSELPDGLEDLQKLEWLWVKDNKLTKLPTKIFSCLNLVNFD 134

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
             NN LSA P  + KL KL  L ++ NQL E     C L  L  LD+SNN LS  PP + 
Sbjct: 135 ASNNKLSAFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEELDVSNNKLSTFPPGVE 194

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           K+  LR+L +  N L  + S + + P   LL    ++L     S      E L  +    
Sbjct: 195 KLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKL-----SAFPPGVEKLQKL---- 245

Query: 356 SVTSKELSLEGM-----NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
               +EL + G+      LS  P  + +  ++ +L +  N + E+P  + S   L++
Sbjct: 246 ----RELYIYGVKCHNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLEL 298



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 163/357 (45%), Gaps = 44/357 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL +  N + ++   + +LP L VL+V +NKLS  P  + +L  L+ L +        
Sbjct: 319 LRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELYI-------- 370

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
                            NQL E+PS +    +L      NN +++ P  +    K+ +L 
Sbjct: 371 ---------------QDNQLTEVPSGVCSLPHLEVLSVYNNKLSTFPPGVEKLQKLRELY 415

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+LT + +  + S   L  L    N L+  P  +  L +L +L ++ N++  +PSS+
Sbjct: 416 IQDNQLTEVPSG-VCSLPHLELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSV 474

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----LSVLDL 282
               +L    + NN LS  P  + KL KL +L + ++Q  E+  +  QL+    L     
Sbjct: 475 CSLPNLEVLSVYNNKLSTFPPGVEKLQKLKSLSVPASQFDEFPRQVLQLKTLEELYAGQA 534

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEA 341
                  +P E+G +  L  L L  N LRTL         P+ + +L + R+ +  +++ 
Sbjct: 535 GGRKFDIVPDEVGNLQHLWFLALENNLLRTL---------PSTMSHLHNLRVVQLWNNKF 585

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
            T  E L  +        ++L +   N++ +P+ +  A ++  LD+S N +   PP+
Sbjct: 586 DTFPEVLCELP-----AMEKLDIRNNNITRLPTALHRADKLKDLDVSGNPL-TYPPQ 636



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 10/234 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L +  N + ++   + +LP L +L V +NKLS+ P  + +L  L+ L +  N + ++
Sbjct: 411 LRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTEV 470

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL- 165
           P  + S   L      +N+L   P  + +   L       +     P  +     + +L 
Sbjct: 471 PSSVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLKSLSVPASQFDEFPRQVLQLKTLEELY 530

Query: 166 --DVEGNKLTVLSN---NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
                G K  ++ +   NL   W +  E     NLL  +P T+  L  L  + L  N+  
Sbjct: 531 AGQAGGRKFDIVPDEVGNLQHLWFLALE----NNLLRTLPSTMSHLHNLRVVQLWNNKFD 586

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           + P  +    ++ +  + NN ++ LP  L +  KL  LD+  N L     + C+
Sbjct: 587 TFPEVLCELPAMEKLDIRNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDVCE 640


>gi|61557121|ref|NP_001013173.1| leucine-rich repeat protein SHOC-2 [Rattus norvegicus]
 gi|81910889|sp|Q6AYI5.1|SHOC2_RAT RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|50925627|gb|AAH79032.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Rattus
           norvegicus]
 gi|149040408|gb|EDL94446.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_a
           [Rattus norvegicus]
          Length = 582

 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 205/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D+RNLP L+ L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITAVEKDVRNLPRLSTL 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 14/197 (7%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +P S+     L E Y+ +N L +LPAE+G L  L TL L  N L    
Sbjct: 103 MRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L +L +LDL +N L  +P  + ++ +L  L L  N +  +   + N P  + L  
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLS- 221

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               + EN+  +      +L  + T        L +    L  +P EI    +IT LDL 
Sbjct: 222 ----IRENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCTQITNLDLQ 269

Query: 389 RNSIQELPPELSSCASL 405
            N + +LP  + + +SL
Sbjct: 270 HNELLDLPDTIGNLSSL 286


>gi|326441151|ref|ZP_08215885.1| hypothetical protein SclaA2_08794 [Streptomyces clavuligerus ATCC
           27064]
          Length = 309

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 139/266 (52%), Gaps = 3/266 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N   +  + +  L  L VL++  N LS +P+ +G L  ++ L+++ N +  +
Sbjct: 24  LTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSV 83

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF-KASNNCITSLPEDLADCSKMSKL 165
           P EIG+ + L   D   N+L ++P SLG    LS +   S+N ITS+P+ L     +  L
Sbjct: 84  PAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYLYLSDNKITSVPDSLCRLGHLRYL 143

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT L          L EL    N L G+P +IG+L  L    L  NR+  +P  
Sbjct: 144 NITDNRLTALPER-FGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMGNRLTGLPEE 202

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I G   L E  + +N ++ALP  +G L +L  LDL +N+L+       +L RL+ LDL N
Sbjct: 203 IGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNNELRAVPDAIGRLDRLTHLDLRN 262

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L  LPP +  +  L KL L  NPL
Sbjct: 263 NRLHELPPTLAALPRLEKLDLRWNPL 288



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 143/317 (45%), Gaps = 41/317 (12%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           + +LD+SFN +  +P ++G    L +    SNQ    P ++     L       N ++++
Sbjct: 1   MAALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNV 60

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P  L    ++  L++ GN+L+                         +P  IG+LSRL  L
Sbjct: 61  PSGLGGLREIRVLNLAGNRLS------------------------SVPAEIGALSRLHTL 96

Query: 213 DLHQNRILSIPSSISGCCSLAEF-YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           DL  N +  IP S+     L+ + Y+ +N ++++P  L +L  L  L++  N+L      
Sbjct: 97  DLGHNELTDIPPSLGDVTGLSRYLYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPER 156

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
              L  L  L L +N L+GLP  IG +  LR+  L GN L  L    + G     L  LR
Sbjct: 157 FGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMGNRLTGLPEE-IGG-----LADLR 210

Query: 331 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
             RL +N  +    T   L+ + TRL + + EL        A+P  I     +T LDL  
Sbjct: 211 ELRLMDNRVTALPDTIGGLVRL-TRLDLRNNELR-------AVPDAIGRLDRLTHLDLRN 262

Query: 390 NSIQELPPELSSCASLQ 406
           N + ELPP L++   L+
Sbjct: 263 NRLHELPPTLAALPRLE 279



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 26/211 (12%)

Query: 48  QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP 107
           + L L+ N I  + + L  L  L  LN++ N+L+ LP   G+L  L+ L +  N +  +P
Sbjct: 118 RYLYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLP 177

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
             IG+   L +     N+L  LP  +G   +L + +  +N +T+LP+ +    ++++LD+
Sbjct: 178 RSIGALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDL 237

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
             N+                        L  +P+ IG L RL  LDL  NR+  +P +++
Sbjct: 238 RNNE------------------------LRAVPDAIGRLDRLTHLDLRNNRLHELPPTLA 273

Query: 228 GCCSLAEFYMGNN--ALSALPAELGKLSKLG 256
               L +  +  N  AL  LPA +  L + G
Sbjct: 274 ALPRLEKLDLRWNPLALDPLPAWVSSLEQRG 304



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 70/136 (51%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           +++ +   L++L L HN +  L   +  L  L   ++  N+L+ LP  IG L  L+ L +
Sbjct: 155 ERFGDLASLRELRLYHNRLTGLPRSIGALRELREAHLMGNRLTGLPEEIGGLADLRELRL 214

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N +  +PD IG    L + D  +N+L+ +P ++GR   L+     NN +  LP  LA 
Sbjct: 215 MDNRVTALPDTIGGLVRLTRLDLRNNELRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAA 274

Query: 159 CSKMSKLDVEGNKLTV 174
             ++ KLD+  N L +
Sbjct: 275 LPRLEKLDLRWNPLAL 290


>gi|456875031|gb|EMF90265.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 526

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 183/402 (45%), Gaps = 18/402 (4%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           VY N  EA +       +DLQ     H  +  L +++ NL  L  L++   +L+ LP  I
Sbjct: 37  VYYNLTEALQHPTDVRTLDLQAQDSNHK-LTNLPKEIGNLQNLQKLSLYGKQLTTLPKEI 95

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G+L  L+ LD+++NS+  +P EIG    L      +NQL   P  + +   L     ++N
Sbjct: 96  GKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHN 155

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +T+LPE++    K+ +L ++GN+ T L    I     L EL    N    +P+ I  L 
Sbjct: 156 QLTTLPEEIGKLQKLKELHLDGNQFTTLPKE-IEKLQKLKELHLGSNRFTTLPKEIKKLQ 214

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L+L  NR  ++P  I    +L    + +N  + LP E+ KL  L  L+L SN+   
Sbjct: 215 NLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTT 274

Query: 268 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E   L +L  L L++N L+ LP EIGK+ +L++L L  N L TL    +        
Sbjct: 275 LPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQLTTLPKE-IGNLQNLQK 333

Query: 327 KYLRSRLPENEDSEASTTK--EDLITMATRLSVTSKE---------LSLEGMNLSAIPSE 375
             L +        E    +  + L     + +   KE         L L    L+ +P E
Sbjct: 334 LNLNNNPLTTLPKEIGKLQNLQQLFLGGNQFTTLPKEIGNLQNLQKLDLYYNKLTTLPKE 393

Query: 376 IWEAGEITKLDLSRNSIQELPPE---LSSCASLQVKFSDLVT 414
           I     + KLDL  N +  LP E   L S  SL + ++DL T
Sbjct: 394 IGNLQNLQKLDLYNNQLTTLPKEIGNLQSLESLDLSYNDLTT 435



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 176/396 (44%), Gaps = 32/396 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L N  L   P E+ K                LQKL LAHN +  L E++  L  L  L
Sbjct: 127 LRLPNNQLTTFPKEIEK-------------LQKLQKLSLAHNQLTTLPEEIGKLQKLKEL 173

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+ + LP  I +L  LK L +  N    +P EI     L   +  SN+   LP  +
Sbjct: 174 HLDGNQFTTLPKEIEKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEI 233

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +  NL      +N  T+LP+++     +  L+++ N+ T L    I +   L +L  + 
Sbjct: 234 KKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKE-IGNLQKLQKLSLAH 292

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG L  L RL L +N++ ++P  I    +L +  + NN L+ LP E+GKL 
Sbjct: 293 NQLTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGNLQNLQKLNLNNNPLTTLPKEIGKLQ 352

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQ      E   L+ L  LDL  N L+ LP EIG +  L+KL L  N L T
Sbjct: 353 NLQQLFLGGNQFTTLPKEIGNLQNLQKLDLYYNKLTTLPKEIGNLQNLQKLDLYNNQLTT 412

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM--NLS 370
           L   + N      L+ L S            +  DL T+   +    K   LE     L 
Sbjct: 413 LPKEIGN------LQSLES---------LDLSYNDLTTLPKEIGKLQKLKKLELYYNQLK 457

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P EI +  ++  L L  N +  LP E+     LQ
Sbjct: 458 TLPKEIEKLQKLETLGLYGNQLTTLPEEIGKLQKLQ 493



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 151/297 (50%), Gaps = 15/297 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL +     +P E+ K               +LQ L L  N    L ++++ L  L  L
Sbjct: 219 LNLDSNRFTTLPKEIKK-------------LQNLQWLNLDSNRFTTLPKEIKKLQNLQWL 265

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+ + LP  IG L  L+ L ++ N +  +P EIG   +L +     NQL  LP  +
Sbjct: 266 NLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQLTTLPKEI 325

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL     +NN +T+LP+++     + +L + GN+ T L    I +   L +L    
Sbjct: 326 GNLQNLQKLNLNNNPLTTLPKEIGKLQNLQQLFLGGNQFTTLPKE-IGNLQNLQKLDLYY 384

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG+L  L +LDL+ N++ ++P  I    SL    +  N L+ LP E+GKL 
Sbjct: 385 NKLTTLPKEIGNLQNLQKLDLYNNQLTTLPKEIGNLQSLESLDLSYNDLTTLPKEIGKLQ 444

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           KL  L+L+ NQLK    E  +L +L  L L  N L+ LP EIGK+  L++L L  NP
Sbjct: 445 KLKKLELYYNQLKTLPKEIEKLQKLETLGLYGNQLTTLPEEIGKLQKLQELDLGDNP 501


>gi|418727704|ref|ZP_13286292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959062|gb|EKO22839.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 356

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/243 (37%), Positives = 131/243 (53%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  I +L  LKSLD++ N    +P EIG    L + +  +NQLK LP 
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     S N +T+ P+++     + KL+++ N+LT L    I     L +L  
Sbjct: 112 EIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQE-IGQLKNLQKLNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            KN L  +P  IG L  L  L L  N++  +P  I    +L    +G+N L+ LP E+G+
Sbjct: 171 DKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQ 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L   +N+L     E  QL +L  L LS+N L+ LP EIG++  L++L L  N L
Sbjct: 231 LQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQL 290

Query: 311 RTL 313
            TL
Sbjct: 291 TTL 293



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 147/285 (51%), Gaps = 15/285 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           +K  +   SL+L+N   + +P E+              +  +LQ+L L +N ++ L +++
Sbjct: 67  IKQLQNLKSLDLANNQFKTLPKEI-------------GQLQNLQELNLWNNQLKNLPKEI 113

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L +S N+L+  P  IG+L  L+ L++ +N +  +  EIG    L K +   N
Sbjct: 114 GQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKN 173

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +LK LP+ +G+  NL +   SNN +T LPE++     +  L +  N+LT+L    I    
Sbjct: 174 RLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKE-IGQLQ 232

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L +  N L  +P+ IG L +L  L L  N++ ++P  I    +L E Y+ +N L+ 
Sbjct: 233 NLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTT 292

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           LP E+G+L  L T    +NQL     E  QL+ L  L L+NN LS
Sbjct: 293 LPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQLS 337



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 137/270 (50%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L ++++ L  L  L++++N+   LP  IG+L  L+ L++  N + 
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     S N+L   P  +G+  NL       N +T+L +++     + K
Sbjct: 108 NLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L+++ N+L  L N  I     L EL  S N L  +PE IG L  L  L L  N++  +P 
Sbjct: 168 LNLDKNRLKALPNE-IGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPK 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   Y  NN L+ LP E+G+L KL  L L  NQL     E  QL  L  L L+
Sbjct: 227 EIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLN 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +N L+ LP EIG++  L+  +   N L  L
Sbjct: 287 DNQLTTLPKEIGQLKNLQTFISFNNQLTML 316



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 24/284 (8%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP+++     +  LD+  N+   L    I     L EL    N
Sbjct: 51  RVLNLSSQK-----LTTLPKEIKQLQNLKSLDLANNQFKTLPKE-IGQLQNLQELNLWNN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+ IG L  L  L L  NR+ + P  I    +L +  +  N L+ L  E+G+L  
Sbjct: 105 QLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKN 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L  N+LK    E  QL+ L  L LSNN L+ LP EIG++  L+ L+L  N L  L
Sbjct: 165 LQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTIL 224

Query: 314 RSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                    P  +  L++ +L  + ++E +   ++ I    +L      L L    L+ +
Sbjct: 225 ---------PKEIGQLQNLKLLYSVNNELTILPQE-IGQLQKLQY----LYLSHNQLTTL 270

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ--VKFSDLVT 414
           P EI +   + +L L+ N +  LP E+    +LQ  + F++ +T
Sbjct: 271 PKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLT 314


>gi|418669438|ref|ZP_13230822.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410754822|gb|EKR16467.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 633

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 175/380 (46%), Gaps = 23/380 (6%)

Query: 33  DEAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
           DE G      EA+    +++ L L+  N   L + +  L  L  L++  N+L+  PA I 
Sbjct: 34  DEPGTYRDLTEALQNPLNVRVLDLSGQNFTTLPKKIEQLKNLQELDLRDNQLATFPAVIV 93

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           EL  L+SLD+S N ++ +P+EIG    L +     N+L   P  +G+  NL      +N 
Sbjct: 94  ELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQ 153

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           + +LP ++     + KL++  N+LTVL    I     L  L    N L  +P  IG L  
Sbjct: 154 LATLPVEIGQLQNLEKLNLRKNRLTVLPKE-IGQLQNLQTLNLQDNQLATLPVEIGQLQN 212

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L L +N++ + P  I    +L E  +  N L+ALP E+G+L  L  L+L  NQL  +
Sbjct: 213 LQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTF 272

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL +L  L L  N L+  P EIG++  L+ L L  N  +T+   +          
Sbjct: 273 PKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQ-------- 324

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKL 385
                       + + +   L T+   +    K  +LSL    L+ +P EI +   +  L
Sbjct: 325 -------LKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNL 377

Query: 386 DLSRNSIQELPPELSSCASL 405
           DL  N +  LP E+    +L
Sbjct: 378 DLGTNQLTTLPKEIGQLKNL 397



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 190/436 (43%), Gaps = 74/436 (16%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R   +LNL +  L  +P E+              +  +L+KL L  N +  L +++  L 
Sbjct: 142 RNLQTLNLQDNQLATLPVEI-------------GQLQNLEKLNLRKNRLTVLPKEIGQLQ 188

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  LN+  N+L+ LP  IG+L  L++L +S N +   P EIG    L + +   N+L  
Sbjct: 189 NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTA 248

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL--------- 179
           LP  +G+  NL + + S N +T+ P+++    K+  L +  N+LT     +         
Sbjct: 249 LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQML 308

Query: 180 -------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                        I     L +L  S N L  +P  IG L +L  L L +N++ ++P  I
Sbjct: 309 DLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEI 368

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L    +G N L+ LP E+G+L  L  L L  NQL  +  E  QL  L  LDL NN
Sbjct: 369 GQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNN 428

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP EIG++  L  L L+ N L T    +        LK L                
Sbjct: 429 RLTALPKEIGQLKNLENLELSENQLTTFPKEI------GQLKKL---------------- 466

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +DL     RL +              +P EI +  ++  L LS N +  LP E+    +L
Sbjct: 467 QDLGLSYNRLVI--------------LPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNL 512

Query: 406 QVKFSDLVTNKESCIS 421
           Q+   DL  N+   +S
Sbjct: 513 QM--LDLCYNQFKTVS 526



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 178/397 (44%), Gaps = 41/397 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L  ++  L  L  L +S N+L+  P  IG+L  L+ L++ +N +  
Sbjct: 189 NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTA 248

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   + S NQL   P  +G+   L D     N +T+ P+++     +  L
Sbjct: 249 LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQML 308

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+   +S   I     L +L  S N L  +P  IG L +L  L L +N++ ++P  
Sbjct: 309 DLCYNQFKTVSKE-IGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKE 367

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +G N L+ LP E+G+L  L  L L  NQL  +  E  QL  L  LDL N
Sbjct: 368 IGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWN 427

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL----LKYLRSRLPENEDSE 340
           N L+ LP EIG++  L  L L+ N L T    +  G    L    L Y R  +   E  +
Sbjct: 428 NRLTALPKEIGQLKNLENLELSENQLTTFPKEI--GQLKKLQDLGLSYNRLVILPKEIGQ 485

Query: 341 ASTTKEDLITMATRLSVTSKEL----SLEGMNL--------------------------- 369
                +DL     RL +  KE+    +L+ ++L                           
Sbjct: 486 LEKL-QDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQ 544

Query: 370 -SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            + +P+EI +   +  LDL  N +  LP E+    +L
Sbjct: 545 LATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNL 581



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 184/427 (43%), Gaps = 48/427 (11%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKL---ILAHNNIEKLKED 63
           L+LS ++   +P ++   KN  E    D          V+LQKL    L+ N +  L  +
Sbjct: 55  LDLSGQNFTTLPKKIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 114

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL   P  IG+L  L++L++  N +  +P EIG    L K +   
Sbjct: 115 IGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 174

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  +G+  NL      +N + +LP ++     +  L +  N+LT      I   
Sbjct: 175 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKE-IGQL 233

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL    N L  +P+ IG L  L  L+L +N++ + P  I     L +  +G N L+
Sbjct: 234 ENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLT 293

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYC-----------------------VEACQL-RLSV 279
             P E+G+L  L  LDL  NQ K                           E  QL +L  
Sbjct: 294 TFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQD 353

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L  N L+ LP EIG++  L  L L  N L TL   +        LK L + L    + 
Sbjct: 354 LSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEI------GQLKNLYN-LGLGRNQ 406

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            A+  KE  I     L    +EL L    L+A+P EI +   +  L+LS N +   P E+
Sbjct: 407 LATFPKE--IGQLENL----QELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEI 460

Query: 400 SSCASLQ 406
                LQ
Sbjct: 461 GQLKKLQ 467



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 151/312 (48%), Gaps = 12/312 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEG--------DKWWEAVDLQKLILAHNNIEKLKE 62
           +L LS   L   P E+   K   + G G         +  +  +LQ L L +N  + + +
Sbjct: 261 NLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSK 320

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+S+N+L+ LPA IG+L  L+ L +  N +  +P EIG    L   D  
Sbjct: 321 EIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLG 380

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQL  LP  +G+  NL +     N + + P+++     + +LD+  N+LT L    I  
Sbjct: 381 TNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKE-IGQ 439

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L  S+N L   P+ IG L +L  L L  NR++ +P  I     L +  +  N L
Sbjct: 440 LKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRL 499

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
             LP E+G+L  L  LDL  NQ K    E      L  L+LS N L+ LP EIG++  L 
Sbjct: 500 VILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLY 559

Query: 302 KLLLTGNPLRTL 313
            L L  N L TL
Sbjct: 560 NLDLGTNQLTTL 571



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 164/358 (45%), Gaps = 19/358 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N +    +++  L  L  L +  N+L+  P  IG+L  L+ LD+ +N    
Sbjct: 258 NLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKT 317

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +  EIG    L++ + S NQL  LP+ +G+   L D     N +T+LP+++     +  L
Sbjct: 318 VSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNL 377

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L    I     L  L   +N L   P+ IG L  L  LDL  NR+ ++P  
Sbjct: 378 DLGTNQLTTLPKE-IGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKE 436

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    +L    +  N L+  P E+G+L KL  L L  N+L     E  QL +L  L LS 
Sbjct: 437 IGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSY 496

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L  LP EIG++  L+ L L  N  +T+   +                      + + +
Sbjct: 497 NRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQ---------------LKNLLQLNLS 541

Query: 345 KEDLITMATRLSVTSKELSLE-GMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
              L T+   +       +L+ G N L+ +P EI +   +  L L  N +  LP E+ 
Sbjct: 542 YNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 599



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 140/265 (52%), Gaps = 2/265 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N +  L +++  L  L  L++  N+L+ LP  IG+L  L +L +  N +   
Sbjct: 351 LQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATF 410

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L + D  +N+L  LP  +G+  NL + + S N +T+ P+++    K+  L 
Sbjct: 411 PKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLG 470

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L +L    I     L +L  S N L  +P+ IG L  L  LDL  N+  ++   I
Sbjct: 471 LSYNRLVILPKE-IGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEI 529

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L +  +  N L+ LPAE+G+L  L  LDL +NQL     E  QL+ L  L L  N
Sbjct: 530 GQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTN 589

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPL 310
            L+ LP EIG++  L+ LLL+ NP+
Sbjct: 590 QLTTLPKEIGQLKKLQWLLLSVNPI 614



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 139/305 (45%), Gaps = 35/305 (11%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           ++L  +L   LN+     S    T+LP+ +     + +LD+  N+L      +I     L
Sbjct: 40  RDLTEALQNPLNVRVLDLSGQNFTTLPKKIEQLKNLQELDLRDNQLATFP-AVIVELQKL 98

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L  S+N L  +P  IG L  L  L L++N++++ P  I    +L    + +N L+ LP
Sbjct: 99  ESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLP 158

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+G+L  L  L+L  N+L     E  QL+ L  L+L +N L+ LP EIG++  L+ L L
Sbjct: 159 VEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGL 218

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL--- 362
           + N L T          P  +  L +              ++L     RL+   KE+   
Sbjct: 219 SENQLTTF---------PKEIGQLENL-------------QELNLKWNRLTALPKEIGQL 256

Query: 363 -SLEGMNLS-----AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
            +LE + LS       P EI +  ++  L L RN +   P E+    +LQ+   DL  N+
Sbjct: 257 KNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQM--LDLCYNQ 314

Query: 417 ESCIS 421
              +S
Sbjct: 315 FKTVS 319


>gi|156373929|ref|XP_001629562.1| predicted protein [Nematostella vectensis]
 gi|261277881|sp|A7SFP1.1|SHOC2_NEMVE RecName: Full=Leucine-rich repeat protein soc-2 homolog
 gi|156216565|gb|EDO37499.1| predicted protein [Nematostella vectensis]
          Length = 577

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 196/405 (48%), Gaps = 44/405 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  ++++P+ +YK         ++             N I  ++  + NL LL  L
Sbjct: 160 LDLRHNKIKEIPDVIYKLTTLTTLYLRF-------------NRISVVESGIGNLKLLERL 206

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+  LP  IG+L  L +LD+S N I  +P EIG+   +   D   N +  LP S+
Sbjct: 207 SLRENKIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNCVHMTSLDLQHNDIPSLPDSI 266

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           GR   ++      N ++SLP+ LA+CS + + ++EGN +  L   L++S   LT L  S+
Sbjct: 267 GRLTAMTRLGLRYNQLSSLPDSLANCSGIDEFNIEGNNIAELPEKLLSSLKNLTSLTLSR 326

Query: 194 NLLN----GMPETIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAE 248
           N       G P+    ++  I   +  NR+  IP  + +    L++  + +N L++LP +
Sbjct: 327 NKFEVFPAGPPKQFCQVNTFI---MEHNRMQKIPFGVFNKAKYLSKLNVKDNQLTSLPLD 383

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
            G    L  L++ +NQ+ +   E  Q  + L VL LSNN L  LP  IG +  LR L + 
Sbjct: 384 FGSWISLVELNVATNQISKLP-EDIQWLVNLEVLILSNNLLKKLPRGIGALRKLRVLDIE 442

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRS--RLPENEDSEASTTKE-DLITMATRLSVTSKELS 363
            N L ++         P  ++YLRS  RL    +   S  +    ++  T LSV   E  
Sbjct: 443 ENKLESI---------PTEIEYLRSLERLVLQSNCLGSLPRSIGYLSSVTYLSVGENE-- 491

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
                L ++P EI     + +L L+ N ++Q LP EL  C SLQ+
Sbjct: 492 -----LVSVPQEIGNMESLEQLYLNDNENLQSLPYELVLCGSLQI 531



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 179/422 (42%), Gaps = 73/422 (17%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           +L L+   +  L ++L+ L  L  L +  N+++ LP  +G L  L++L +S N++  +PD
Sbjct: 90  RLDLSKAAVTVLPKELKELTSLRELYLYGNRIAVLPPEVGLLPNLETLALSENNLTTLPD 149

Query: 109 EIGSATALVKFDCSSNQLKELP-----------------------SSLGRCLNLSDFKAS 145
            +   T L   D   N++KE+P                       S +G    L      
Sbjct: 150 NLVKLTKLKVLDLRHNKIKEIPDVIYKLTTLTTLYLRFNRISVVESGIGNLKLLERLSLR 209

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
            N I  LP  +     +  LD+  N +  L    I +   +T L    N +  +P++IG 
Sbjct: 210 ENKIKILPRVIGQLVHLVTLDISHNHIENLPAE-IGNCVHMTSLDLQHNDIPSLPDSIGR 268

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQ 264
           L+ + RL L  N++ S+P S++ C  + EF +  N ++ LP + L  L  L +L L  N+
Sbjct: 269 LTAMTRLGLRYNQLSSLPDSLANCSGIDEFNIEGNNIAELPEKLLSSLKNLTSLTLSRNK 328

Query: 265 L--------KEYC------VEACQLR------------LSVLDLSNNSLSGLPPEIGKMT 298
                    K++C      +E  +++            LS L++ +N L+ LP + G   
Sbjct: 329 FEVFPAGPPKQFCQVNTFIMEHNRMQKIPFGVFNKAKYLSKLNVKDNQLTSLPLDFGSWI 388

Query: 299 TLRKLLLTGNPLRTLRSS---LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           +L +L +  N +  L      LVN     L   L  +LP              I    +L
Sbjct: 389 SLVELNVATNQISKLPEDIQWLVNLEVLILSNNLLKKLPRG------------IGALRKL 436

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE---LSSCASLQVKFSDL 412
            V    L +E   L +IP+EI     + +L L  N +  LP     LSS   L V  ++L
Sbjct: 437 RV----LDIEENKLESIPTEIEYLRSLERLVLQSNCLGSLPRSIGYLSSVTYLSVGENEL 492

Query: 413 VT 414
           V+
Sbjct: 493 VS 494



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 6/212 (2%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           H  I+K +E+       T L++S   ++ LP  + EL  L+ L +  N I  +P E+G  
Sbjct: 77  HKEIQKCREEGA-----TRLDLSKAAVTVLPKELKELTSLRELYLYGNRIAVLPPEVGLL 131

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L     S N L  LP +L +   L      +N I  +P+ +   + ++ L +  N+++
Sbjct: 132 PNLETLALSENNLTTLPDNLVKLTKLKVLDLRHNKIKEIPDVIYKLTTLTTLYLRFNRIS 191

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
           V+ +  I +  +L  L   +N +  +P  IG L  L+ LD+  N I ++P+ I  C  + 
Sbjct: 192 VVESG-IGNLKLLERLSLRENKIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNCVHMT 250

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
              + +N + +LP  +G+L+ +  L L  NQL
Sbjct: 251 SLDLQHNDIPSLPDSIGRLTAMTRLGLRYNQL 282



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 104/251 (41%), Gaps = 47/251 (18%)

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
           T L  SK  +  +P+ +  L+ L  L L+ NRI  +P  +    +L    +  N L+ LP
Sbjct: 89  TRLDLSKAAVTVLPKELKELTSLRELYLYGNRIAVLPPEVGLLPNLETLALSENNLTTLP 148

Query: 247 AELGKLSKLGTLDLHSNQLKEY---------------------CVEACQLRLSVLD---L 282
             L KL+KL  LDL  N++KE                       VE+    L +L+   L
Sbjct: 149 DNLVKLTKLKVLDLRHNKIKEIPDVIYKLTTLTTLYLRFNRISVVESGIGNLKLLERLSL 208

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
             N +  LP  IG++  L  L ++ N +  L + + N      L    + +P   DS   
Sbjct: 209 RENKIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNCVHMTSLDLQHNDIPSLPDSIGR 268

Query: 343 TTKEDLITMATRLSVTSKELS----------------LEGMNLSAIPSEIWEA-GEITKL 385
                 +T  TRL +   +LS                +EG N++ +P ++  +   +T L
Sbjct: 269 ------LTAMTRLGLRYNQLSSLPDSLANCSGIDEFNIEGNNIAELPEKLLSSLKNLTSL 322

Query: 386 DLSRNSIQELP 396
            LSRN  +  P
Sbjct: 323 TLSRNKFEVFP 333


>gi|418668095|ref|ZP_13229499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756128|gb|EKR17754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 427

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 157/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP +L +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 398 KLYLHNNPL 406



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 26/355 (7%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L TL  ++   
Sbjct: 265 KNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENI--- 321

Query: 321 PTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                L+ L++  L  N+ +      E L  + +        L LE   L+A+P EI + 
Sbjct: 322 ---GQLQRLQTLYLGNNQLNVLPNKLEQLQNLES--------LDLEHNQLNALPKEIGKL 370

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKF-------SDLVTNKESCISGCYLYW 427
            ++  L+L  N +  LP E+    +L+  +       S+ +      +  C +Y+
Sbjct: 371 QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPLPSEKIERIRKLLPQCIIYF 425


>gi|418709217|ref|ZP_13270011.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770553|gb|EKR45772.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 412

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 157/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 85  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 144

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 145 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 204

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 205 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE-IGQ 263

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GNN L
Sbjct: 264 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 323

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP +L +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 324 NVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 383

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 384 KLYLHNNPL 392



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 26/355 (7%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 73  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 132

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 133 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 190

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 191 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 250

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L TL  ++   
Sbjct: 251 KNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENI--- 307

Query: 321 PTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                L+ L++  L  N+ +      E L  + +        L LE   L+A+P EI + 
Sbjct: 308 ---GQLQRLQTLYLGNNQLNVLPNKLEQLQNLES--------LDLEHNQLNALPKEIGKL 356

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKF-------SDLVTNKESCISGCYLYW 427
            ++  L+L  N +  LP E+    +L+  +       S+ +      +  C +Y+
Sbjct: 357 QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPLPSEKIERIRKLLPQCNIYF 411



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 112/248 (45%), Gaps = 24/248 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L HN    + +++  L  L  L + HN+L+ LP  IG+L  L+SL +  N +  +
Sbjct: 152 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 211

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLG-----------------------RCLNLSDFK 143
           P EIG    L      +NQL  LP  +G                       +  NL   K
Sbjct: 212 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLK 271

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
              N +T+LP+++     + +LD++GN+L  L  N I     L  L    N LN +P  +
Sbjct: 272 LYENQLTTLPKEIGQLQNLQELDLDGNQLITLPEN-IGQLQRLQTLYLGNNQLNVLPNKL 330

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
             L  L  LDL  N++ ++P  I     L    +  N L+ LP E+ +L  L  L LH+N
Sbjct: 331 EQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 390

Query: 264 QLKEYCVE 271
            L    +E
Sbjct: 391 PLPSEKIE 398



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L E++  L  L  L + +N+L+ LP  + +L  L+SLD+  N +  
Sbjct: 289 NLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNA 348

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L   +   NQL  LP  + +  NL      NN + S
Sbjct: 349 LPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 394


>gi|456970650|gb|EMG11404.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 426

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 157/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP +L +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 398 KLYLHNNPL 406



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 26/355 (7%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L TL  ++   
Sbjct: 265 KNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENI--- 321

Query: 321 PTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                L+ L++  L  N+ +      E L  + +        L LE   L+A+P EI + 
Sbjct: 322 ---GQLQRLQTLYLGNNQLNVLPNKLEQLQNLES--------LDLEHNQLNALPKEIGKL 370

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKF-------SDLVTNKESCISGCYLYW 427
            ++  L+L  N +  LP E+    +L+  +       S+ +      +  C +Y+
Sbjct: 371 QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPLPSEKIERIRKLLPQCNIYF 425



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 112/248 (45%), Gaps = 24/248 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L HN    + +++  L  L  L + HN+L+ LP  IG+L  L+SL +  N +  +
Sbjct: 166 LQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVL 225

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLG-----------------------RCLNLSDFK 143
           P EIG    L      +NQL  LP  +G                       +  NL   K
Sbjct: 226 PKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLK 285

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
              N +T+LP+++     + +LD++GN+L  L  N I     L  L    N LN +P  +
Sbjct: 286 LYENQLTTLPKEIGQLQNLQELDLDGNQLITLPEN-IGQLQRLQTLYLGNNQLNVLPNKL 344

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
             L  L  LDL  N++ ++P  I     L    +  N L+ LP E+ +L  L  L LH+N
Sbjct: 345 EQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNN 404

Query: 264 QLKEYCVE 271
            L    +E
Sbjct: 405 PLPSEKIE 412



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L E++  L  L  L + +N+L+ LP  + +L  L+SLD+  N +  
Sbjct: 303 NLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNA 362

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L   +   NQL  LP  + +  NL      NN + S
Sbjct: 363 LPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 408


>gi|260788686|ref|XP_002589380.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
 gi|229274557|gb|EEN45391.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
          Length = 670

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 159/310 (51%), Gaps = 15/310 (4%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LSN+ L  +P EV+             +  DL+ L +++N +  + E +  L  L+ 
Sbjct: 17  TLDLSNQGLTSIPEEVF-------------DITDLEFLDVSNNKLTSIPEAIGRLQNLSR 63

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+   N ++ LP AI  L  LK L V  N++ ++PD +     L       N+LK+LP+ 
Sbjct: 64  LDADGNMMTSLPQAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTK 123

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +  CLNL +F ASNN +++ P  +    K+ +L + GN+LT + +  + S   L +L   
Sbjct: 124 IFSCLNLVNFDASNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSG-VCSLPNLEKLSVY 182

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L+  P  +  L +L  L ++ N++  +PS +    +L +  + NN LS  P  + KL
Sbjct: 183 NNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKL 242

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            KL  L +H NQL E     C L  L  L + NN+LS  PP + K+  LR+L +  N L 
Sbjct: 243 QKLRELYIHDNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIHHNQLT 302

Query: 312 TLRSSLVNGP 321
            + S + + P
Sbjct: 303 EVPSGVCSLP 312



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 145/312 (46%), Gaps = 22/312 (7%)

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +   L+  D S+  L  +P  +    +L     SNN +TS+PE +     +S+LD +GN 
Sbjct: 11  TVNGLLTLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAIGRLQNLSRLDADGNM 70

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +T L    I+S   L +L    N L+ +P+ +  L  L  L +  N++  +P+ I  C +
Sbjct: 71  MTSLP-QAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLN 129

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L  F   NN LS  P  + KL KL  L ++ NQL E     C L  L  L + NN+LS  
Sbjct: 130 LVNFDASNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTF 189

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT---------------PALLKYLRSRLPE 335
           PP + K+  LR+L + GN L  + S + + P                P + K  + R   
Sbjct: 190 PPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELY 249

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
             D++ +     + ++        ++LS+   NLS  P  + +  ++ +L +  N + E+
Sbjct: 250 IHDNQLTEVPSGVCSLPNL-----EKLSVYNNNLSTFPPGVEKLQKLRELYIHHNQLTEV 304

Query: 396 PPELSSCASLQV 407
           P  + S  +L+V
Sbjct: 305 PSGVCSLPNLEV 316



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 171/364 (46%), Gaps = 21/364 (5%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K +  ++L     ++NN+      +  L  L  L +  N+L+E+P+ +  L  L+ L V 
Sbjct: 123 KIFSCLNLVNFDASNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVY 182

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N++   P  +     L +     NQL E+PS +    NL      NN +++ P  +   
Sbjct: 183 NNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKL 242

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            K+ +L +  N+LT + +  + S   L +L    N L+  P  +  L +L  L +H N++
Sbjct: 243 QKLRELYIHDNQLTEVPSG-VCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIHHNQL 301

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
             +PS +    +L    +GNN +  LP E+ +L+++ TL + S Q  E+  +  QL+ L 
Sbjct: 302 TEVPSGVCSLPNLEVLSVGNNPIRCLPDEVTRLTRMKTLSVPSCQFDEFPRQVLQLKTLE 361

Query: 279 VLDLSNNS---LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLP 334
           +L    N       +P E+G +  L  L L  N LRTL         P+ + +L + R  
Sbjct: 362 MLYAGQNGGRKFDMVPDEVGNLQHLWFLALENNLLRTL---------PSTMSHLHNLRQV 412

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
           +  +++  T  E L  +        ++L ++  N++ IP+ +  A ++  LD+S N +  
Sbjct: 413 QLWNNKFDTFPEVLCELPA-----MEKLDIKNNNITRIPTALHRADKLRDLDVSGNPL-T 466

Query: 395 LPPE 398
            PP+
Sbjct: 467 YPPQ 470



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 151/354 (42%), Gaps = 28/354 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL + +NN+      +  L  L  L +  N+L+E+P+ +  L  L+ L V  N++  
Sbjct: 175 NLEKLSVYNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLST 234

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  +     L +     NQL E+PS +    NL      NN +++ P  +    K+ +L
Sbjct: 235 FPPGVEKLQKLRELYIHDNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLREL 294

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT + +  + S   L  L    N +  +P+ +  L+R+  L +   +    P  
Sbjct: 295 YIHHNQLTEVPSG-VCSLPNLEVLSVGNNPIRCLPDEVTRLTRMKTLSVPSCQFDEFPRQ 353

Query: 226 ISGCCSLAEFYMG--------------------------NNALSALPAELGKLSKLGTLD 259
           +    +L   Y G                          NN L  LP+ +  L  L  + 
Sbjct: 354 VLQLKTLEMLYAGQNGGRKFDMVPDEVGNLQHLWFLALENNLLRTLPSTMSHLHNLRQVQ 413

Query: 260 LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           L +N+   +    C+L  +  LD+ NN+++ +P  + +   LR L ++GNPL      + 
Sbjct: 414 LWNNKFDTFPEVLCELPAMEKLDIKNNNITRIPTALHRADKLRDLDVSGNPLTYPPQDVC 473

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
              T A++ +L+    ++E   ++  +  +    T+    ++ L L    + AI
Sbjct: 474 KQGTGAIMAFLKQEAEKDERILSAFNRLSVRMSQTQWKPLARSLGLSNRAMDAI 527



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 17/158 (10%)

Query: 14  LNLSNRSLRDVPNEVYK------------NFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           L++ N  +R +P+EV +             FDE     +  +   L+ L    N   K  
Sbjct: 317 LSVGNNPIRCLPDEVTRLTRMKTLSVPSCQFDEFPR--QVLQLKTLEMLYAGQNGGRKFD 374

Query: 62  ---EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
              +++ NL  L  L + +N L  LP+ +  LH L+ + +  N     P+ +    A+ K
Sbjct: 375 MVPDEVGNLQHLWFLALENNLLRTLPSTMSHLHNLRQVQLWNNKFDTFPEVLCELPAMEK 434

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
            D  +N +  +P++L R   L D   S N +T  P+D+
Sbjct: 435 LDIKNNNITRIPTALHRADKLRDLDVSGNPLTYPPQDV 472


>gi|428181668|gb|EKX50531.1| hypothetical protein GUITHDRAFT_66992 [Guillardia theta CCMP2712]
          Length = 614

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 137/256 (53%), Gaps = 2/256 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L LA N +  L  ++ NL  L  + +SHN+L  +P  I  L  L  L+V  N +  +
Sbjct: 297 LKELHLAWNQLTTLPVEIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSL 356

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EIG    L +F    NQ++ +PSS+GR L L    AS N +T+LP+ + + + ++ LD
Sbjct: 357 PNEIGDLDNLEEFRTHHNQIQAIPSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLD 416

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N L  L    I + T L +L+  +N L  +P T+G L+ L  LDL  NR+ S+P  +
Sbjct: 417 LAVNNLEALPGT-IGNLTALKKLLLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGV 475

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               +L +F +  NAL  LP  +G L  L  L L  NQL         L  L +L LS N
Sbjct: 476 GNLKNLMKFNLIQNALVKLPPSIGSLESLTQLSLRENQLAILPASMNMLFNLQILSLSAN 535

Query: 286 SLSGLPPEIGKMTTLR 301
            L  LPP I  +TTL+
Sbjct: 536 RLYELPPLIEDLTTLQ 551



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 149/288 (51%), Gaps = 17/288 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+K++L+HN ++++  +++NL  LT LNV  N+L  LP  IG+L  L+      N I  
Sbjct: 319 NLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEEFRTHHNQIQA 378

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP  IG    L   D S NQL  LP S+G   +L+    + N + +LP  + + + + KL
Sbjct: 379 IPSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTALKKL 438

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  NKLT+L    +   T L  L    N L  +P  +G+L  L++ +L QN ++ +P S
Sbjct: 439 LLYRNKLTILPLT-VGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNALVKLPPS 497

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--------CVEACQ--- 274
           I    SL +  +  N L+ LPA +  L  L  L L +N+L E          ++ CQ   
Sbjct: 498 IGSLESLTQLSLRENQLAILPASMNMLFNLQILSLSANRLYELPPLIEDLTTLQVCQDLP 557

Query: 275 -----LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                  L VL +S+N+L  LP +IG    L +L ++ N L+ L +++
Sbjct: 558 QKSLTPSLQVLTISDNALETLPVKIGNFRALTQLAVSNNQLKELPATI 605



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 199/427 (46%), Gaps = 52/427 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHN---------NI---EKLK 61
           L L N SL  +P E+ K                L+ L+L HN         NI   EKLK
Sbjct: 206 LTLQNNSLERIPMELGK-------------LSQLEALMLDHNKDLINSLPANIGRCEKLK 252

Query: 62  E------DLRNLPLLT-------VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           E       L ++P++        VL +  N++ ELP  IG L  LK L +++N +  +P 
Sbjct: 253 ELWLSDNRLTSMPVVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKELHLAWNQLTTLPV 312

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           EIG+   L K   S N+L+ +P  +    +L+      N + SLP ++ D   + +    
Sbjct: 313 EIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEEFRTH 372

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N++  + ++ I     L  L AS+N L  +P++IG L+ L  LDL  N + ++P +I  
Sbjct: 373 HNQIQAIPSS-IGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGN 431

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             +L +  +  N L+ LP  +GKL+ L TLDL +N+L         L+ L   +L  N+L
Sbjct: 432 LTALKKLLLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNAL 491

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             LPP IG + +L +L L  N L  L +S+       L       L  N   E     ED
Sbjct: 492 VKLPPSIGSLESLTQLSLRENQLAILPASM-----NMLFNLQILSLSANRLYELPPLIED 546

Query: 348 LITMATRLSVTSKEL--SLEGMNLS-----AIPSEIWEAGEITKLDLSRNSIQELPPELS 400
           L T+     +  K L  SL+ + +S      +P +I     +T+L +S N ++ELP  + 
Sbjct: 547 LTTLQVCQDLPQKSLTPSLQVLTISDNALETLPVKIGNFRALTQLAVSNNQLKELPATIG 606

Query: 401 SCASLQV 407
           +   L+V
Sbjct: 607 ASCILRV 613



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 193/418 (46%), Gaps = 41/418 (9%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           R    A+ +  L+LS   L  VP EV +               +L +L L  NN+  L  
Sbjct: 38  RKFNRAKWTAKLDLSCNGLTFVPIEVVR-------------MTNLTQLKLFKNNLTNLPS 84

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
            +  L  LT L+V  NK+S LP  +G+L  L+ L +S+N   K+   IG  T L      
Sbjct: 85  AIGGLLKLTSLSVIDNKISVLPPEMGKLLNLRKLRISYNDFTKLTPVIGQMTKLESLKAD 144

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N +  L    G+     D + SNN + SLP ++   + +++L +  N L  +    I  
Sbjct: 145 NNSITHLIPEFGKL----DLRLSNNQLESLPTEMGSMTSLTQLKLPFNLLKTVPKE-IGD 199

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRL--IRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
              L EL    N L  +P  +G LS+L  + LD +++ I S+P++I  C  L E ++ +N
Sbjct: 200 LENLIELTLQNNSLERIPMELGKLSQLEALMLDHNKDLINSLPANIGRCEKLKELWLSDN 259

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L+++P  +   +++  L L  N+++E   +   L  L  L L+ N L+ LP EIG +  
Sbjct: 260 RLTSMPVVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKELHLAWNQLTTLPVEIGNLAN 319

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--NEDSEASTTKEDLITMATRLSV 357
           L K+LL+ N L+ +   + N  +   L   ++RLP   NE  +                 
Sbjct: 320 LEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNL------------- 366

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP---ELSSCASLQVKFSDL 412
             +E       + AIPS I    ++  LD S N +  LP    EL+S A L +  ++L
Sbjct: 367 --EEFRTHHNQIQAIPSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNL 422



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 47/248 (18%)

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           A WT   +L  S N L  +P  +  ++ L +L L +N + ++PS+I G   L    + +N
Sbjct: 43  AKWT--AKLDLSCNGLTFVPIEVVRMTNLTQLKLFKNNLTNLPSAIGGLLKLTSLSVIDN 100

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            +S LP E+GKL  L  L +  N   +      Q+ +L  L   NNS++ L PE GK+  
Sbjct: 101 KISVLPPEMGKLLNLRKLRISYNDFTKLTPVIGQMTKLESLKADNNSITHLIPEFGKL-- 158

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
              L L+ N L +L       PT                            M +  S+T 
Sbjct: 159 --DLRLSNNQLESL-------PT---------------------------EMGSMTSLT- 181

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF----SDLVTN 415
            +L L    L  +P EI +   + +L L  NS++ +P EL   + L+        DL+ +
Sbjct: 182 -QLKLPFNLLKTVPKEIGDLENLIELTLQNNSLERIPMELGKLSQLEALMLDHNKDLINS 240

Query: 416 KESCISGC 423
             + I  C
Sbjct: 241 LPANIGRC 248


>gi|440804073|gb|ELR24954.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 827

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 126/411 (30%), Positives = 186/411 (45%), Gaps = 56/411 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           S++ S R L  VP +V             W++ D   L +  N +E +  D+ +L  LT 
Sbjct: 370 SVDYSRRQLTSVPPQV-------------WQSTDATILNMYMNKLESIPPDIGHLKGLTA 416

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L ++ N L +LP  IG L  L+ LD+ +N +  +P  I   T L K     N+L ELP  
Sbjct: 417 LGLNENNLKKLPPEIGNLTRLRILDLRYNKLRTVPANIKHLTQLSKLFLRFNRLVELPEE 476

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   +L      NN +TSLP  L   + +  LDV  NKL  L+ NL +    L EL   
Sbjct: 477 IGSLQSLEILSVRNNQLTSLPRSLDLATNLKVLDVSTNKLQFLNCNL-SPLIFLKELDCK 535

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE------------------ 234
           +N+L+ +P    +LS L R+DL  N+    P +++   SLAE                  
Sbjct: 536 QNMLSVLPTGWSTLSNLTRVDLSHNQFAQFPPALAELPSLAELDMEGNQLTSLVDIGQLT 595

Query: 235 ----FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-----CVEACQLRLSVLDLSNN 285
                Y+ +N L  LP  +GKL  L  L L +NQL        CV A  L L   DLS+N
Sbjct: 596 ALERLYLNSNRLVTLPPSMGKLRSLKYLQLRANQLTSLPEGTSCVMAG-LELREADLSSN 654

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           + S +P  I  ++TL+ L +T N +  L       PT   L+ L++   E    E+    
Sbjct: 655 NFSEMPEAI-LVSTLQNLSITDNVMTKL------PPTITRLQSLKTCNLEGNQLESLDPG 707

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
             L+T    L +   E       +S IP E+     + +LDL  N ++ LP
Sbjct: 708 VALLTNLVHLRLGYNE-------ISTIPDEVSRMSSLQELDLEHNRLESLP 751



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 138/340 (40%), Gaps = 76/340 (22%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L KL L  N + +L E++ +L  L +L+V +N+L+ LP ++     LK LDVS N +  +
Sbjct: 460 LSKLFLRFNRLVELPEEIGSLQSLEILSVRNNQLTSLPRSLDLATNLKVLDVSTNKLQFL 519

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
              +     L + DC  N L  LP+      NL+    S+N     P  LA+   +++LD
Sbjct: 520 NCNLSPLIFLKELDCKQNMLSVLPTGWSTLSNLTRVDLSHNQFAQFPPALAELPSLAELD 579

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +EGN+LT L +  I   T L  L  + N L  +P ++G L  L  L L  N++ S+P   
Sbjct: 580 MEGNQLTSLVD--IGQLTALERLYLNSNRLVTLPPSMGKLRSLKYLQLRANQLTSLPEGT 637

Query: 227 SGCC--------------------------SLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           S C                           +L    + +N ++ LP  + +L  L T +L
Sbjct: 638 S-CVMAGLELREADLSSNNFSEMPEAILVSTLQNLSITDNVMTKLPPTITRLQSLKTCNL 696

Query: 261 HSNQLKEY------CVEACQLRLSV------------------LDLSNNSLSGLPPEIGK 296
             NQL+              LRL                    LDL +N L  LP  IG 
Sbjct: 697 EGNQLESLDPGVALLTNLVHLRLGYNEISTIPDEVSRMSSLQELDLEHNRLESLPQTIGG 756

Query: 297 MTT-----------------------LRKLLLTGNPLRTL 313
           M                         L +L + GNP++ +
Sbjct: 757 MLALSLLVLNDNLLDDLPNELVLLDKLTELKVDGNPMKNI 796



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 27/251 (10%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSEL----------------- 83
           W    +L ++ L+HN   +    L  LP L  L++  N+L+ L                 
Sbjct: 546 WSTLSNLTRVDLSHNQFAQFPPALAELPSLAELDMEGNQLTSLVDIGQLTALERLYLNSN 605

Query: 84  -----PAAIGELHMLKSLDVSFNSIMKIPDEIGSATA---LVKFDCSSNQLKELPSSLGR 135
                P ++G+L  LK L +  N +  +P+      A   L + D SSN   E+P ++  
Sbjct: 606 RLVTLPPSMGKLRSLKYLQLRANQLTSLPEGTSCVMAGLELREADLSSNNFSEMPEAI-L 664

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
              L +   ++N +T LP  +     +   ++EGN+L  L    +A  T L  L    N 
Sbjct: 665 VSTLQNLSITDNVMTKLPPTITRLQSLKTCNLEGNQLESLDPG-VALLTNLVHLRLGYNE 723

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           ++ +P+ +  +S L  LDL  NR+ S+P +I G  +L+   + +N L  LP EL  L KL
Sbjct: 724 ISTIPDEVSRMSSLQELDLEHNRLESLPQTIGGMLALSLLVLNDNLLDDLPNELVLLDKL 783

Query: 256 GTLDLHSNQLK 266
             L +  N +K
Sbjct: 784 TELKVDGNPMK 794


>gi|428181670|gb|EKX50533.1| hypothetical protein GUITHDRAFT_66876, partial [Guillardia theta
           CCMP2712]
          Length = 526

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 176/357 (49%), Gaps = 41/357 (11%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS--IM 104
           L++L++ HN ++   + +RNL  LT ++VSHN +++LPA IG    L  L+VSFNS  I 
Sbjct: 108 LRELMIDHNELQVPPDWIRNLQALTYMDVSHNSINKLPAEIGACTELHHLNVSFNSNKIS 167

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           K+P E+G    + + D S+N+L+ LPS LG+  NL+     NN I  L + ++  S + K
Sbjct: 168 KLPQELGLLADMTELDVSNNRLQALPSDLGKLTNLNILLDGNNLIVVLEDSISMLSSLRK 227

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N L  L   +I   T L  L    N +  +P  IG+L +++ ++L +N +  IP 
Sbjct: 228 LDLSFNMLRELPPEIIF-LTNLEGLYLVNNRIKTLPGDIGNLLKMVEVNLSENELEYIPE 286

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVL 280
           ++    +L    +  NAL+ LP ++  L+ L  + L +N L     E+  +    +L+ L
Sbjct: 287 TVGKMEALQSLVIEENALNYLPNQINGLTSLTKISLANNALDMLPAESFAIGYLYKLTEL 346

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
             SNN LS +P  I ++TTL  L L  N +R L   L       +L  LR          
Sbjct: 347 RFSNNQLSSIPEIISQLTTLDILHLAKNQIRKLPYEL------GVLSSLREL-------- 392

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                               +LSL G  L  IPS I     + KL L+ N +  LPP
Sbjct: 393 --------------------DLSLAGNMLQMIPSGIGNFQGLKKLFLNDNQLAILPP 429



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 175/357 (49%), Gaps = 23/357 (6%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L VL +  N +SE+P  IG L  L  + +  N+I +IP  I +   L      
Sbjct: 9   DIFELTELKVLWLHDNNISEIPTEIGNLQELNQIRLYNNNIKEIPSSISNLQKLSVLWIQ 68

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L++LP  +G C  LS    S N +T LP  L  C+ + +L ++ N+L V   + I +
Sbjct: 69  NNELEDLPEEIGNCTQLSVLSLSENRLTKLPYSLGQCTMLRELMIDHNELQV-PPDWIRN 127

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLD--LHQNRILSIPSSISGCCSLAEFYMGNN 240
              LT +  S N +N +P  IG+ + L  L+   + N+I  +P  +     + E  + NN
Sbjct: 128 LQALTYMDVSHNSINKLPAEIGACTELHHLNVSFNSNKISKLPQELGLLADMTELDVSNN 187

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMT 298
            L ALP++LGKL+ L  L L  N L     ++  +   L  LDLS N L  LPPEI  +T
Sbjct: 188 RLQALPSDLGKLTNLNIL-LDGNNLIVVLEDSISMLSSLRKLDLSFNMLRELPPEIIFLT 246

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L  L L  N ++TL   + N     LLK +   L ENE      T   +  + +     
Sbjct: 247 NLEGLYLVNNRIKTLPGDIGN-----LLKMVEVNLSENELEYIPETVGKMEALQS----- 296

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL----QVKFSD 411
              L +E   L+ +P++I     +TK+ L+ N++  LP E  +   L    +++FS+
Sbjct: 297 ---LVIEENALNYLPNQINGLTSLTKISLANNALDMLPAESFAIGYLYKLTELRFSN 350



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 163/309 (52%), Gaps = 18/309 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   LR++P E+                 +L+ L L +N I+ L  D+ NL  +  +
Sbjct: 228 LDLSFNMLRELPPEIIF-------------LTNLEGLYLVNNRIKTLPGDIGNLLKMVEV 274

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS-- 131
           N+S N+L  +P  +G++  L+SL +  N++  +P++I   T+L K   ++N L  LP+  
Sbjct: 275 NLSENELEYIPETVGKMEALQSLVIEENALNYLPNQINGLTSLTKISLANNALDMLPAES 334

Query: 132 -SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-IASWTMLTEL 189
            ++G    L++ + SNN ++S+PE ++  + +  L +  N++  L   L + S     +L
Sbjct: 335 FAIGYLYKLTELRFSNNQLSSIPEIISQLTTLDILHLAKNQIRKLPYELGVLSSLRELDL 394

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N+L  +P  IG+   L +L L+ N++  +P S+     L E  + NN L ALP  L
Sbjct: 395 SLAGNMLQMIPSGIGNFQGLKKLFLNDNQLAILPPSVGDLLELEELQLFNNELIALPERL 454

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L  +++ +N+L+        L  L  L+LS+N L GLP EIG++  L  L L  N
Sbjct: 455 GQLRNLKQMNMSNNKLRVVLPAIGNLSNLEKLNLSHNLLQGLPREIGQIEKLLFLSLEHN 514

Query: 309 PLRTLRSSL 317
            L++L   L
Sbjct: 515 ELQSLPVQL 523



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 26/208 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF--NSIM 104
           L +L  ++N +  + E +  L  L +L+++ N++ +LP  +G L  L+ LD+S   N + 
Sbjct: 343 LTELRFSNNQLSSIPEIISQLTTLDILHLAKNQIRKLPYELGVLSSLRELDLSLAGNMLQ 402

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            IP  IG+   L K   + NQL  LP S+G  L L + +  NN + +LPE L     + +
Sbjct: 403 MIPSGIGNFQGLKKLFLNDNQLAILPPSVGDLLELEELQLFNNELIALPERLGQLRNLKQ 462

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           +++  NKL V+    I + + L +L  S NLL G+P  IG + +L+ L L  N       
Sbjct: 463 MNMSNNKLRVVLP-AIGNLSNLEKLNLSHNLLQGLPREIGQIEKLLFLSLEHNE------ 515

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKL 252
                            L +LP +LG L
Sbjct: 516 -----------------LQSLPVQLGHL 526



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 111/230 (48%), Gaps = 16/230 (6%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  I  L+ L  L LH N I  IP+ I     L +  + NN +  +P+ +  L KL
Sbjct: 3   LTEIPADIFELTELKVLWLHDNNISEIPTEIGNLQELNQIRLYNNNIKEIPSSISNLQKL 62

Query: 256 GTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L + +N+L++   E     +LSVL LS N L+ LP  +G+ T LR+L++  N L+   
Sbjct: 63  SVLWIQNNELEDLPEEIGNCTQLSVLSLSENRLTKLPYSLGQCTMLRELMIDHNELQV-- 120

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITMATRLSVTSKELSLEGMNLSAIP 373
                   P  ++ L++ L   + S  S  K    I   T L   +  +S     +S +P
Sbjct: 121 -------PPDWIRNLQA-LTYMDVSHNSINKLPAEIGACTELHHLN--VSFNSNKISKLP 170

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF--SDLVTNKESCIS 421
            E+    ++T+LD+S N +Q LP +L    +L +    ++L+   E  IS
Sbjct: 171 QELGLLADMTELDVSNNRLQALPSDLGKLTNLNILLDGNNLIVVLEDSIS 220


>gi|24215148|ref|NP_712629.1| hypothetical protein LA_2448 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074467|ref|YP_005988784.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|417776841|ref|ZP_12424673.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672944|ref|ZP_13234274.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|24196218|gb|AAN49647.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458256|gb|AER02801.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|410573337|gb|EKQ36387.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580051|gb|EKQ47882.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 428

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 176/365 (48%), Gaps = 38/365 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L  N ++ L +++  L  L  LN+S N+L+ LP  IG+L  L+ LD+  N +  
Sbjct: 72  NLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L     SSNQL  LP   G+  NL +   S+N +T+LP+++     +  L
Sbjct: 132 LPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ N+LT L    I     L  L  S N L  +P  IG L  L  L+L  N++ ++P  
Sbjct: 192 NLKSNQLTTLFKE-IEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIE 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + +N L+ LP E+GKL  L TL+L  NQL    +E  +L+ L  L+L +
Sbjct: 251 IGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHS 310

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ L  EI ++  L+ L L+ N L  L         P  +  L++             
Sbjct: 311 NQLTTLSKEIEQLKNLQTLSLSYNRLVIL---------PKEIGQLQNL------------ 349

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                          +EL+L    L+A+P EI +   +  L L +N +   P E+    +
Sbjct: 350 ---------------QELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKN 394

Query: 405 LQVKF 409
           LQ  +
Sbjct: 395 LQTLY 399



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 146/306 (47%), Gaps = 12/306 (3%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS+  L  +P E+ K  N       D     +        +LQ L L+ N +  L  +
Sbjct: 99  LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE 158

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
              L  L  LN+S N+L+ LP  IG+L  L++L++  N +  +  EI     L   + S 
Sbjct: 159 SGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSD 218

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL     S+N +T+LP ++     +  L++  N+LT L    I   
Sbjct: 219 NQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIE-IGKL 277

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S N L  +   IG L  L  L+LH N++ ++   I    +L    +  N L 
Sbjct: 278 QNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 337

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L  L+L +NQL    +E  QL+ L  L L  N L   P EIG++  L+ 
Sbjct: 338 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQT 397

Query: 303 LLLTGN 308
           L L G+
Sbjct: 398 LYLGGH 403



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 144/337 (42%), Gaps = 58/337 (17%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + KL +  N+L  L    I     L 
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKE-IGQLKNLQ 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY----------- 236
           EL  S N L  +P+ IG L  L RLDL+ NR+  +P  I    +L   Y           
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 237 ------------MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
                       + +N L+ LP E+G+L  L TL+L SNQL     E  QL+ L  L+LS
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---SSLVNGPT-----------PALLKYL 329
           +N L+ LP EIGK+  L  L L+ N L TL      L N  T           P  +  L
Sbjct: 218 DNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKL 277

Query: 330 RSRLPENEDSEASTT----------KEDLITMATRLSVTSKE---------LSLEGMNLS 370
           ++    N      TT           +DL   + +L+  SKE         LSL    L 
Sbjct: 278 QNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 337

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +P EI +   + +L+L  N +  LP E+    +LQ 
Sbjct: 338 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQT 374


>gi|418730499|ref|ZP_13288993.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774708|gb|EKR54712.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 631

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 166/357 (46%), Gaps = 19/357 (5%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+  N   L +++  L  L  L++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG
Sbjct: 55  LSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIG 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L +     N+L   P  +G+  NL      +N + +LP ++     + KL++  N+
Sbjct: 115 RLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNR 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LTVL    I     L  L    N L  +P  IG L  L  L L +N++ + P  I    +
Sbjct: 175 LTVLPKE-IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLEN 233

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L E  +  N L+ALP E+G+L  L  L+L  NQL  +  E  QL +L  L L  N L+  
Sbjct: 234 LQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTF 293

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P EIG++  L+ L L  N  +T+   +                      + + +   L T
Sbjct: 294 PKEIGQLKNLQMLDLCYNQFKTVSKEIGQ---------------LKNLLQLNLSYNQLAT 338

Query: 351 MATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +   +    K  +LSL    L+ +P EI +   +  LDL  N +  LP E+    +L
Sbjct: 339 LPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNL 395



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 190/436 (43%), Gaps = 74/436 (16%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R   +LNL +  L  +P E+              +  +L+KL L  N +  L +++  L 
Sbjct: 140 RNLQTLNLQDNQLATLPVEI-------------GQLQNLEKLNLRKNRLTVLPKEIGQLQ 186

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  LN+  N+L+ LP  IG+L  L++L +S N +   P EIG    L + +   N+L  
Sbjct: 187 NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTA 246

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL--------- 179
           LP  +G+  NL + + S N +T+ P+++    K+  L +  N+LT     +         
Sbjct: 247 LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQML 306

Query: 180 -------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                        I     L +L  S N L  +P  IG L +L  L L +N++ ++P  I
Sbjct: 307 DLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEI 366

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L    +G N L+ LP E+G+L  L  L L  NQL  +  E  QL  L  LDL NN
Sbjct: 367 GQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNN 426

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            L+ LP EIG++  L  L L+ N L T    +        LK L                
Sbjct: 427 RLTALPKEIGQLKNLENLELSENQLTTFPKEI------GQLKKL---------------- 464

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +DL     RL +              +P EI +  ++  L LS N +  LP E+    +L
Sbjct: 465 QDLGLSYNRLVI--------------LPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNL 510

Query: 406 QVKFSDLVTNKESCIS 421
           Q+   DL  N+   +S
Sbjct: 511 QM--LDLCYNQFKTVS 524



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 178/397 (44%), Gaps = 41/397 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L  ++  L  L  L +S N+L+  P  IG+L  L+ L++ +N +  
Sbjct: 187 NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTA 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   + S NQL   P  +G+   L D     N +T+ P+++     +  L
Sbjct: 247 LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQML 306

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+   +S   I     L +L  S N L  +P  IG L +L  L L +N++ ++P  
Sbjct: 307 DLCYNQFKTVSKE-IGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKE 365

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +G N L+ LP E+G+L  L  L L  NQL  +  E  QL  L  LDL N
Sbjct: 366 IGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWN 425

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL----LKYLRSRLPENEDSE 340
           N L+ LP EIG++  L  L L+ N L T    +  G    L    L Y R  +   E  +
Sbjct: 426 NRLTALPKEIGQLKNLENLELSENQLTTFPKEI--GQLKKLQDLGLSYNRLVILPKEIGQ 483

Query: 341 ASTTKEDLITMATRLSVTSKEL----SLEGMNL--------------------------- 369
                +DL     RL +  KE+    +L+ ++L                           
Sbjct: 484 LEKL-QDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQ 542

Query: 370 -SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            + +P+EI +   +  LDL  N +  LP E+    +L
Sbjct: 543 LATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNL 579



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 180/429 (41%), Gaps = 52/429 (12%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKL---ILAHNNIEKLKED 63
           LNLS ++   +P E+   KN  E    D          V+LQKL    L+ N +  L  +
Sbjct: 53  LNLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL   P  IG+L  L++L++  N +  +P EIG    L K +   
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 172

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  +G+  NL      +N + +LP ++     +  L +  N+LT      I   
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKE-IGQL 231

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL    N L  +P+ IG L  L  L+L +N++ + P  I     L +  +G N L+
Sbjct: 232 ENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLT 291

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYC-----------------------VEACQL-RLSV 279
             P E+G+L  L  LDL  NQ K                           E  QL +L  
Sbjct: 292 TFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQD 351

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L  N L+ LP EIG++  L  L L  N L TL   +        LK L +        
Sbjct: 352 LSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEI------GQLKNLYN-------- 397

Query: 340 EASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                +  L T    +      +EL L    L+A+P EI +   +  L+LS N +   P 
Sbjct: 398 -LGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPK 456

Query: 398 ELSSCASLQ 406
           E+     LQ
Sbjct: 457 EIGQLKKLQ 465



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 152/312 (48%), Gaps = 12/312 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEG--------DKWWEAVDLQKLILAHNNIEKLKE 62
           +L LS   L   P E+   K   + G G         +  +  +LQ L L +N  + + +
Sbjct: 259 NLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSK 318

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+S+N+L+ LPA IG+L  L+ L +  N +  +P EIG    L   D  
Sbjct: 319 EIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLG 378

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQL  LP  +G+  NL +     N +T+ P+++     + +LD+  N+LT L    I  
Sbjct: 379 TNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKE-IGQ 437

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L  S+N L   P+ IG L +L  L L  NR++ +P  I     L +  +  N L
Sbjct: 438 LKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRL 497

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
             LP E+G+L  L  LDL  NQ K    E      L  L+LS N L+ LP EIG++  L 
Sbjct: 498 VILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLY 557

Query: 302 KLLLTGNPLRTL 313
            L L  N L TL
Sbjct: 558 NLDLGTNQLTTL 569



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 164/358 (45%), Gaps = 19/358 (5%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N +    +++  L  L  L +  N+L+  P  IG+L  L+ LD+ +N    
Sbjct: 256 NLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYNQFKT 315

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +  EIG    L++ + S NQL  LP+ +G+   L D     N +T+LP+++     +  L
Sbjct: 316 VSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNL 375

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT L    I     L  L   +N L   P+ IG L  L  LDL  NR+ ++P  
Sbjct: 376 DLGTNQLTTLPKE-IGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKE 434

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    +L    +  N L+  P E+G+L KL  L L  N+L     E  QL +L  L LS 
Sbjct: 435 IGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSY 494

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L  LP EIG++  L+ L L  N  +T+   +                      + + +
Sbjct: 495 NRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQ---------------LKNLLQLNLS 539

Query: 345 KEDLITMATRLSVTSKELSLE-GMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
              L T+   +       +L+ G N L+ +P EI +   +  L L  N +  LP E+ 
Sbjct: 540 YNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 597



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 140/265 (52%), Gaps = 2/265 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N +  L +++  L  L  L++  N+L+ LP  IG+L  L +L +  N +   
Sbjct: 349 LQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTF 408

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L + D  +N+L  LP  +G+  NL + + S N +T+ P+++    K+  L 
Sbjct: 409 PKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLG 468

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L +L    I     L +L  S N L  +P+ IG L  L  LDL  N+  ++   I
Sbjct: 469 LSYNRLVILPKE-IGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEI 527

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L +  +  N L+ LPAE+G+L  L  LDL +NQL     E  QL+ L  L L  N
Sbjct: 528 GQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTN 587

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPL 310
            L+ LP EIG++  L+ LLL+ NP+
Sbjct: 588 QLTTLPKEIGQLKKLQWLLLSVNPI 612



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 35/304 (11%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + +LD+  N+L      +I     L 
Sbjct: 39  DLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFP-AVIVELQKLE 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
            L  S+N L  +P  IG L  L  L L++N++++ P  I    +L    + +N L+ LP 
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPV 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L  L+L  N+L     E  QL+ L  L+L +N L+ LP EIG++  L+ L L+
Sbjct: 158 EIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL---- 362
            N L T          P  +  L +              ++L     RL+   KE+    
Sbjct: 218 ENQLTTF---------PKEIGQLENL-------------QELNLKWNRLTALPKEIGQLK 255

Query: 363 SLEGMNLS-----AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKE 417
           +LE + LS       P EI +  ++  L L RN +   P E+    +LQ+   DL  N+ 
Sbjct: 256 NLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQM--LDLCYNQF 313

Query: 418 SCIS 421
             +S
Sbjct: 314 KTVS 317


>gi|268551887|ref|XP_002633925.1| C. briggsae CBR-SOC-2 protein [Caenorhabditis briggsae]
 gi|261277879|sp|A8XWW4.1|SHOC2_CAEBR RecName: Full=Leucine-rich repeat protein soc-2; AltName:
           Full=Suppressor of Clr protein 2; AltName:
           Full=Suppressor of activated let-60 Ras protein 8
          Length = 559

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 196/401 (48%), Gaps = 38/401 (9%)

Query: 15  NLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLN 74
           +L +  L +VP  +YK                L+ L L +N I  + E + NL  L +L+
Sbjct: 148 DLRHNKLTEVPAVIYK-------------ITSLETLWLRYNRIVAVDEQIGNLQKLKMLD 194

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           V  NK+ ELP+AIG+L  L    VS+N + ++P+EIG   AL + D   N L ELP S+G
Sbjct: 195 VRENKIRELPSAIGKLSSLVVCLVSYNHLTRVPEEIGECHALTQLDLQHNDLSELPYSIG 254

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           +  NL       N I  +P +L  C ++ +  VE N L +L  NL+     +  +  S+N
Sbjct: 255 KLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRN 314

Query: 195 LLNGMPETIGSLSRLI---RLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELG 250
            L   P   G   + +    +++  N+I  IP  I S    L +  +  N L +LP ++G
Sbjct: 315 ELTAFPA--GGPQQFVPTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMG 372

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
             + +  L+L +NQLK    +  +L  L +L LSNN L  LP +IG +  LR+L L  N 
Sbjct: 373 SWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEENE 432

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLEGM 367
           L T+ + +        L++L         ++       ++T+   +    + ++L L   
Sbjct: 433 LETVPTEI------GFLQHL---------TKLWVQSNKIVTLPRSIGNLCSLQDLRLGEN 477

Query: 368 NLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQV 407
           NL+AIP EI     +  L L+ NS +  LP EL+ C SL++
Sbjct: 478 NLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEI 518



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 143/293 (48%), Gaps = 27/293 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF--NS 102
            L++ I+  N+++ L  +L   LP +  +N+S N+L+  PA  G    + ++ ++   N 
Sbjct: 281 QLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAG-GPQQFVPTVTINMEHNQ 339

Query: 103 IMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           I KIP  I S AT L K +   N+L  LP  +G   ++++   S N +  LPED+     
Sbjct: 340 ISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVN 399

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L +  N+L  L N  I +   L EL   +N L  +P  IG L  L +L +  N+I++
Sbjct: 400 LEILVLSNNQLKKLPNQ-IGNLKKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKIVT 458

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 281
           +P SI   CSL +  +G N L+A+P E+G L  L +L L+ N                  
Sbjct: 459 LPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDN------------------ 500

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
              +SL  LP E+    +L  + +  +PL  +   +  G    +++YL+ + P
Sbjct: 501 ---SSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 550


>gi|124006156|ref|ZP_01690992.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988333|gb|EAY27986.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 755

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 193/399 (48%), Gaps = 31/399 (7%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           IL    +   LN++N  +R +P             D   +   L+ L +++N + +L   
Sbjct: 282 ILGQCFSLDQLNVANNEIRALP-------------DSLGQLTQLKTLDVSNNLLNRLPNS 328

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +    LLTVL++ +N++  LPA IG+L  L S +V  N +  +P+ I   + L     ++
Sbjct: 329 MTACKLLTVLHIKNNQIKTLPADIGKLAHLTSFNVEHNQLGSLPESIAEISTLGNLFLNN 388

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N L  LP  LG+   L+    +NN +T LPE +     +  L ++ NKL +L  N I  W
Sbjct: 389 NYLTSLPKQLGQLSCLTMLYVNNNQLTQLPESMVRLVNLRYLLLKRNKLRMLPKN-IGQW 447

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  +  + N  + +PET+  L +L  +++  NR+  IPS++    +L    +  N + 
Sbjct: 448 RNLEVINLNHNQFDHIPETLFDLPKLQGVNIRNNRVAFIPSNVGKATNLRNLNVSENCIR 507

Query: 244 ALPAELGKL-SKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLR 301
            LPA +GKL + L +L L  NQL +   E    L L  LDLS+N L+ LP  I ++  L+
Sbjct: 508 VLPASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSHNQLTELPTSITQLENLQ 567

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSK 360
           +L L  N L+ L ++L      + LK LR  ++  N+  E S   + L  +        K
Sbjct: 568 ELYLNNNQLKALPAAL------SRLKNLRVLKVDHNQLKELSKGLDQLPFL--------K 613

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            L+     L  +P     + ++ +L LS N +  LP ++
Sbjct: 614 ILTAAHNQLETLPVNFTRSSQLHQLVLSHNQLNVLPSDM 652



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 181/364 (49%), Gaps = 14/364 (3%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L++L +A   + +L   L  LP +  L VS   L+ LP  +G+   L  L+V+ N I 
Sbjct: 241 VNLEELRIASARLTQLPVSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQLNVANNEIR 300

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PD +G  T L   D S+N L  LP+S+  C  L+     NN I +LP D+   + ++ 
Sbjct: 301 ALPDSLGQLTQLKTLDVSNNLLNRLPNSMTACKLLTVLHIKNNQIKTLPADIGKLAHLTS 360

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
            +VE N+L  L  + IA  + L  L  + N L  +P+ +G LS L  L ++ N++  +P 
Sbjct: 361 FNVEHNQLGSLPES-IAEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVNNNQLTQLPE 419

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
           S+    +L    +  N L  LP  +G+   L  ++L+ NQ          L +L  +++ 
Sbjct: 420 SMVRLVNLRYLLLKRNKLRMLPKNIGQWRNLEVINLNHNQFDHIPETLFDLPKLQGVNIR 479

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN ++ +P  +GK T LR L ++ N +R L +S+  G     L  L   L +N+ ++   
Sbjct: 480 NNRVAFIPSNVGKATNLRNLNVSENCIRVLPASI--GKLGTHLASL--HLAKNQLTQVPE 535

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
              +L+ + T        L L    L+ +P+ I +   + +L L+ N ++ LP  LS   
Sbjct: 536 EIGNLLHLVT--------LDLSHNQLTELPTSITQLENLQELYLNNNQLKALPAALSRLK 587

Query: 404 SLQV 407
           +L+V
Sbjct: 588 NLRV 591



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 175/372 (47%), Gaps = 36/372 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL + H  +  + E++ NL  L  L ++  +L++LP ++G+L  +K L+VS       
Sbjct: 220 LKKLQVYHCALPNIDENISNLVNLEELRIASARLTQLPVSLGKLPAIKYLEVS------- 272

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
               G+             L  LP+ LG+C +L     +NN I +LP+ L   +++  LD
Sbjct: 273 ----GAL------------LTTLPNILGQCFSLDQLNVANNEIRALPDSLGQLTQLKTLD 316

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N L  L N++ A   +LT L    N +  +P  IG L+ L   ++  N++ S+P SI
Sbjct: 317 VSNNLLNRLPNSMTAC-KLLTVLHIKNNQIKTLPADIGKLAHLTSFNVEHNQLGSLPESI 375

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
           +   +L   ++ NN L++LP +LG+LS L  L +++NQL +      +L  L  L L  N
Sbjct: 376 AEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVNNNQLTQLPESMVRLVNLRYLLLKRN 435

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENEDSEAS 342
            L  LP  IG+   L  + L  N    +  +L + P    +    +R   +P N     +
Sbjct: 436 KLRMLPKNIGQWRNLEVINLNHNQFDHIPETLFDLPKLQGVNIRNNRVAFIPSNVGKATN 495

Query: 343 ----TTKEDLITM----ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                  E+ I +      +L      L L    L+ +P EI     +  LDLS N + E
Sbjct: 496 LRNLNVSENCIRVLPASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSHNQLTE 555

Query: 395 LPPELSSCASLQ 406
           LP  ++   +LQ
Sbjct: 556 LPTSITQLENLQ 567



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 147/289 (50%), Gaps = 5/289 (1%)

Query: 23  DVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           +V N  +  FD   E    ++   LQ + + +N +  +  ++     L  LNVS N +  
Sbjct: 451 EVINLNHNQFDHIPET--LFDLPKLQGVNIRNNRVAFIPSNVGKATNLRNLNVSENCIRV 508

Query: 83  LPAAIGEL-HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
           LPA+IG+L   L SL ++ N + ++P+EIG+   LV  D S NQL ELP+S+ +  NL +
Sbjct: 509 LPASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSHNQLTELPTSITQLENLQE 568

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
              +NN + +LP  L+    +  L V+ N+L  LS  L      L  L A+ N L  +P 
Sbjct: 569 LYLNNNQLKALPAALSRLKNLRVLKVDHNQLKELSKGL-DQLPFLKILTAAHNQLETLPV 627

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
                S+L +L L  N++  +PS +    +L    +  N L+ LP  L +  KL  L L+
Sbjct: 628 NFTRSSQLHQLVLSHNQLNVLPSDMGDLNNLVLLDLQGNVLTDLPESLKQCRKLKKLLLN 687

Query: 262 SNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            NQLK   VE  Q  L  L L NN ++ LP  + ++  LR L L  NP+
Sbjct: 688 DNQLKSIKVEGWQ-ELQYLALKNNQIAVLPENLHQLIGLRTLYLNNNPI 735


>gi|418680694|ref|ZP_13241938.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327638|gb|EJO79883.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
          Length = 351

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 152/309 (49%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +L+LS    + +P E+   KN  E          +        +L+KL L+ N I+ + +
Sbjct: 24  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 83

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S
Sbjct: 84  EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 143

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQ+K +P  + +   L      NN +T+LP+++     +  LD+  N+LT L    I  
Sbjct: 144 YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGH 202

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P  IG L  L  L+L  NR+ ++   I    +L    + +N L
Sbjct: 203 LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 262

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G+L  L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L+
Sbjct: 263 TTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQ 322

Query: 302 KLLLTGNPL 310
           +L L  N L
Sbjct: 323 ELFLNNNQL 331



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 27  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 86

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL  LP  +G+   L       N +T+LP+++     +  L++  N+
Sbjct: 87  KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 146

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  +    I     L  L    N L  +P+ IG L  L  LDL  NR+ ++P  I    +
Sbjct: 147 IKTIPKK-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQN 205

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L + Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  LDL +N L+  
Sbjct: 206 LQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTF 265

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P EIG++  L+ L L  N L TL
Sbjct: 266 PKEIGQLKNLQVLDLGSNQLTTL 288



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 143/337 (42%), Gaps = 61/337 (18%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++S N+   LP  IG+L  L+ L+++ N +  +P EIG    L K + S+NQ+K +P 
Sbjct: 24  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 83

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +   L      NN +T+LP+++    K+                    W     L  
Sbjct: 84  EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQ-------------------W-----LYL 119

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            KN L  +P+ IG L  L  L+L  N+I +IP  I     L    + NN L+ LP E+G+
Sbjct: 120 PKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQ 179

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           L  L +LDL                      S N L+ LP EIG +  L+ L L  N L 
Sbjct: 180 LQNLQSLDL----------------------STNRLTTLPQEIGHLQNLQDLYLVSNQLT 217

Query: 312 TLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            L + +        LK L++  L  N  +  S   E L  +        K L L    L+
Sbjct: 218 ILPNEI------GQLKNLQTLNLRNNRLTTLSKEIEQLQNL--------KSLDLRSNQLT 263

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             P EI +   +  LDL  N +  LP  +    +LQ 
Sbjct: 264 TFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQT 300



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + + +  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 136 NLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 195

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 196 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 255

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 256 DLRSNQLTTFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 314

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 315 IGQLQNLQELFLNNNQLSS 333



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 101/207 (48%), Gaps = 18/207 (8%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 25  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 84

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 85  IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 138

Query: 331 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 139 SLNLSYNQIKTIPKKIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 190

Query: 390 NSIQELPPELSSCASLQVKFSDLVTNK 416
           N +  LP E+    +LQ  +  LV+N+
Sbjct: 191 NRLTTLPQEIGHLQNLQDLY--LVSNQ 215


>gi|198451363|ref|XP_002137290.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
 gi|261277894|sp|B5DX45.1|SUR8_DROPS RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|198131455|gb|EDY67848.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
          Length = 629

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 192/397 (48%), Gaps = 30/397 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  +Y+                L  L L  N I  + ++LR L  LT+L
Sbjct: 222 LDLRHNKLAEIPPVIYR-------------LRTLTTLYLRFNRITAVADNLRQLVNLTML 268

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 269 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 328

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N ++S+P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 329 GNLKSLVRLGLRYNRLSSVPATLKNCKSMDEFNVEGNGMTQLPDGMLASLSGLTTITLSR 388

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P       + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G 
Sbjct: 389 NQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGT 448

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +N L++   +   L+ L +L LSNN L  +P  IG M  LR L L  N +
Sbjct: 449 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNMRKLRILDLEENRI 508

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +       LL  L+  + +             ++  T LSV+         NL 
Sbjct: 509 EVLPHEI------GLLHELQRLILQTNQITMLPRSIGHLSNLTHLSVSEN-------NLQ 555

Query: 371 AIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQ 406
            +P EI     +  L +++N  +++LP EL+ C +L+
Sbjct: 556 FLPEEIGSLEGLENLYINQNPGLEKLPFELALCQNLK 592



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 184/399 (46%), Gaps = 61/399 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+ L L  N++  L E L+N   L VL++ HNKL+E+P  I  L  L +L + FN I 
Sbjct: 194 VNLRNLALNENSLTSLPESLQNCKQLKVLDLRHNKLAEIPPVIYRLRTLTTLYLRFNRIT 253

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            + D +     L       N+++EL S++G  +NL+    S+N +  LPED+ +C  +S 
Sbjct: 254 AVADNLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSA 313

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P++IG+L  L+RL L  NR+ S+P+
Sbjct: 314 LDLQHNELL------------------------DIPDSIGNLKSLVRLGLRYNRLSSVPA 349

Query: 225 SISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYC---------VEACQ 274
           ++  C S+ EF +  N ++ LP   L  LS L T+ L  NQ   Y          V +  
Sbjct: 350 TLKNCKSMDEFNVEGNGMTQLPDGMLASLSGLTTITLSRNQFTSYPTGGPAQFTNVYSIN 409

Query: 275 LR-----------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           L                  L+ L++  N L+ LP +IG    + +L L  N L+ L   +
Sbjct: 410 LEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDI 469

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITM-ATRLSVTSKELS---------LEGM 367
           +N     +L    + L +  ++  +  K  ++ +   R+ V   E+          L+  
Sbjct: 470 MNLQNLEILILSNNMLKKIPNTIGNMRKLRILDLEENRIEVLPHEIGLLHELQRLILQTN 529

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            ++ +P  I     +T L +S N++Q LP E+ S   L+
Sbjct: 530 QITMLPRSIGHLSNLTHLSVSENNLQFLPEEIGSLEGLE 568


>gi|198424668|ref|XP_002131394.1| PREDICTED: similar to scribbled CG5462-PH [Ciona intestinalis]
          Length = 1555

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 181/348 (52%), Gaps = 33/348 (9%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--DLQKLI------LA 53
           +L+ ART   L L    ++D+P + ++     + G  D   + +  D+ + +      ++
Sbjct: 36  VLRYARTLEELLLDANQIKDLPKQFFRLVKLRKLGLSDNELQKIPADIAQFVYLVDLNIS 95

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N+I +L E+++    L VL++S N L++LP  I +L  +K L+++  S++++P +IG+ 
Sbjct: 96  RNDIAELPENIKFCKSLEVLDISGNPLTKLPDGICQLVCMKHLNLNDISLIRMPQDIGNL 155

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           + L   +C  N L+ +P +L     L      NN + SLP+ L++ + +  L ++GN LT
Sbjct: 156 SKLQTMECRENLLQSIPYTLCSIGGLEQLDLGNNELESLPDSLSELTNLRDLWLDGNHLT 215

Query: 174 VLSNNL----------------------IASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
            L +++                      I     +T+L  S N ++ +PE+IG L  L  
Sbjct: 216 SLPDSIGKLHNIVCMDLSENKLESVPETIGDLHSITDLTLSHNFIDALPESIGKLKTLSI 275

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L + QNRI  +PSSI    ++ E  +  N L+ LPA +G L K+ TL++  NQL+    E
Sbjct: 276 LKVDQNRISKLPSSIGDWPNITELMLTENLLTELPASIGNLQKMTTLNVDRNQLEVLPPE 335

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
             +   L++L + +N L+ LP E+G  T LR L ++GN L  L  SL 
Sbjct: 336 LGKCSSLNILSVRDNMLTYLPTELGNATNLRVLNVSGNRLDCLPISLA 383



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 39/356 (10%)

Query: 54  HNNIEKLKED-LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           H+++  + ED LR    L  L +  N++ +LP     L  L+ L +S N + KIP +I  
Sbjct: 26  HSSLLVVPEDVLRYARTLEELLLDANQIKDLPKQFFRLVKLRKLGLSDNELQKIPADIAQ 85

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
              LV  + S N + ELP ++  C +L     S N +T LP+ +     M  L++    L
Sbjct: 86  FVYLVDLNISRNDIAELPENIKFCKSLEVLDISGNPLTKLPDGICQLVCMKHLNLNDISL 145

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
             +  + I + + L  +   +NLL  +P T+ S+  L +LDL  N + S+P S+S   +L
Sbjct: 146 IRMPQD-IGNLSKLQTMECRENLLQSIPYTLCSIGGLEQLDLGNNELESLPDSLSELTNL 204

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
            + ++  N L++LP  +GKL  +  +DL  N+L+        L  ++ L LS+N +  LP
Sbjct: 205 RDLWLDGNHLTSLPDSIGKLHNIVCMDLSENKLESVPETIGDLHSITDLTLSHNFIDALP 264

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             IGK+ TL  L +  N +  L SS+ + P                           IT 
Sbjct: 265 ESIGKLKTLSILKVDQNRISKLPSSIGDWPN--------------------------IT- 297

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
                    EL L    L+ +P+ I    ++T L++ RN ++ LPPEL  C+SL +
Sbjct: 298 ---------ELMLTENLLTELPASIGNLQKMTTLNVDRNQLEVLPPELGKCSSLNI 344



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 119/240 (49%), Gaps = 24/240 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L +N +E L + L  L  L  L +  N L+ LP +IG+LH +  +D+S N +  +
Sbjct: 181 LEQLDLGNNELESLPDSLSELTNLRDLWLDGNHLTSLPDSIGKLHNIVCMDLSENKLESV 240

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ IG   ++     S N +  LP S+G+   LS  K   N I+ LP  + D        
Sbjct: 241 PETIGDLHSITDLTLSHNFIDALPESIGKLKTLSILKVDQNRISKLPSSIGD-------- 292

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                           W  +TEL+ ++NLL  +P +IG+L ++  L++ +N++  +P  +
Sbjct: 293 ----------------WPNITELMLTENLLTELPASIGNLQKMTTLNVDRNQLEVLPPEL 336

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
             C SL    + +N L+ LP ELG  + L  L++  N+L    +    L+L  L LS N 
Sbjct: 337 GKCSSLNILSVRDNMLTYLPTELGNATNLRVLNVSGNRLDCLPISLASLKLKALWLSENQ 396



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 114/244 (46%), Gaps = 18/244 (7%)

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           +D   + L V+  +++     L EL+   N +  +P+    L +L +L L  N +  IP+
Sbjct: 22  IDKRHSSLLVVPEDVLRYARTLEELLLDANQIKDLPKQFFRLVKLRKLGLSDNELQKIPA 81

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I+    L +  +  N ++ LP  +     L  LD+  N L +     CQL  +  L+L+
Sbjct: 82  DIAQFVYLVDLNISRNDIAELPENIKFCKSLEVLDISGNPLTKLPDGICQLVCMKHLNLN 141

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL--VNGPTPALLKYLRSRLPENEDSEA 341
           + SL  +P +IG ++ L+ +    N L+++  +L  + G     L+ L   L  NE    
Sbjct: 142 DISLIRMPQDIGNLSKLQTMECRENLLQSIPYTLCSIGG-----LEQL--DLGNNELESL 194

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +  +L  +        ++L L+G +L+++P  I +   I  +DLS N ++ +P  +  
Sbjct: 195 PDSLSELTNL--------RDLWLDGNHLTSLPDSIGKLHNIVCMDLSENKLESVPETIGD 246

Query: 402 CASL 405
             S+
Sbjct: 247 LHSI 250


>gi|418702929|ref|ZP_13263821.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767473|gb|EKR38148.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 328

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 149/299 (49%), Gaps = 15/299 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS    + +P E+              +  +L+KL L+ N I+ + +++  L  L  
Sbjct: 24  TLDLSANRFKTLPKEI-------------GQLKNLRKLNLSANQIKTIPKEIEKLQKLQS 70

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S NQ+K +P  
Sbjct: 71  LYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKK 130

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +   L      NN +T+LP+++     +  LD+  N+LT L    I     L +L   
Sbjct: 131 IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGHLQNLQDLYLV 189

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L  L  L+L  NR+ ++   I    +L    + +N L+  P E+G+L
Sbjct: 190 SNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQL 249

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L++L L  N L
Sbjct: 250 KNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 308



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 125/243 (51%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++S N+   LP  IG+L  L+ L++S N I  IP EI     L      +NQL  LP 
Sbjct: 24  TLDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQ 83

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+   L       N +T+LP+++     +  L++  N++  +    I     L  L  
Sbjct: 84  EIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKK-IEKLQKLQSLGL 142

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL  NR+ ++P  I    +L + Y+ +N L+ LP E+G+
Sbjct: 143 DNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQ 202

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL+L +N+L     E  QL+ L  LDL +N L+  P EIG++  L+ L L  N L
Sbjct: 203 LKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQL 262

Query: 311 RTL 313
            TL
Sbjct: 263 TTL 265



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 134/263 (50%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN+S N++  +P  I +L  L+SL +  N +  +P EIG
Sbjct: 27  LSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIG 86

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L       NQL  LP  +G+  NL     S N I ++P+ +    K+  L ++ N+
Sbjct: 87  QLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQ 146

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L    I     L  L  S N L  +P+ IG L  L  L L  N++  +P+ I    +
Sbjct: 147 LTTLPQE-IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKN 205

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + NN L+ L  E+ +L  L +LDL SNQL  +  E  QL+ L VLDL +N L+ L
Sbjct: 206 LQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTL 265

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P  IG++  L+ L L  N L TL
Sbjct: 266 PEGIGQLKNLQTLDLDSNQLTTL 288



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + + +  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 113 NLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 172

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 173 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 232

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 233 DLRSNQLTTFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 291

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 292 IGQLQNLQELFLNNNQLSS 310



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 131/316 (41%), Gaps = 61/316 (19%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +++LD+S N    +P EIG    L K + S+NQ+K +P  + +   L      NN +T+L
Sbjct: 22  VRTLDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTL 81

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++    K+                    W     L   KN L  +P+ IG L  L  L
Sbjct: 82  PQEIGQLQKLQ-------------------W-----LYLPKNQLTTLPQEIGQLKNLKSL 117

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L  N+I +IP  I     L    + NN L+ LP E+G+L  L +LDL            
Sbjct: 118 NLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDL------------ 165

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS- 331
                     S N L+ LP EIG +  L+ L L  N L  L + +        LK L++ 
Sbjct: 166 ----------STNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI------GQLKNLQTL 209

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            L  N  +  S   E L  +        K L L    L+  P EI +   +  LDL  N 
Sbjct: 210 NLRNNRLTTLSKEIEQLQNL--------KSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQ 261

Query: 392 IQELPPELSSCASLQV 407
           +  LP  +    +LQ 
Sbjct: 262 LTTLPEGIGQLKNLQT 277



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 39/206 (18%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L +  +  N +  +P E+ KL KL +L L +NQL     E
Sbjct: 25  LDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQE 84

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL +L  L L  N L+ LP EIG++  L+ L L+ N ++T+   +        L+ L+
Sbjct: 85  IGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEK------LQKLQ 138

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           S                              L L+   L+ +P EI +   +  LDLS N
Sbjct: 139 S------------------------------LGLDNNQLTTLPQEIGQLQNLQSLDLSTN 168

Query: 391 SIQELPPELSSCASLQVKFSDLVTNK 416
            +  LP E+    +LQ  +  LV+N+
Sbjct: 169 RLTTLPQEIGHLQNLQDLY--LVSNQ 192


>gi|308451071|ref|XP_003088533.1| hypothetical protein CRE_29288 [Caenorhabditis remanei]
 gi|308478403|ref|XP_003101413.1| hypothetical protein CRE_13532 [Caenorhabditis remanei]
 gi|308246970|gb|EFO90922.1| hypothetical protein CRE_29288 [Caenorhabditis remanei]
 gi|308263314|gb|EFP07267.1| hypothetical protein CRE_13532 [Caenorhabditis remanei]
          Length = 559

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 199/403 (49%), Gaps = 38/403 (9%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L +  L +VP+ +YK                L+ L L +N I  + E + NL  L +
Sbjct: 146 TLDLRHNKLTEVPSVIYK-------------INSLETLWLRYNRIVAVDEQIGNLVKLKM 192

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+V  NK+ ELP+AIG+L  L    VS+N + ++P+EIG   +L + D   N L ELP S
Sbjct: 193 LDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECLSLTQLDLQHNDLSELPYS 252

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL       N I  +P +L  C ++ +  VE N L +L  NL+     +  +  S
Sbjct: 253 IGKLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLS 312

Query: 193 KNLLNGMPETIGSLSRLI---RLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAE 248
           +N L   P   G   + +    +++  N+I  IP  I S    L +  +  N L +LP +
Sbjct: 313 RNELTAFPA--GGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLD 370

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G  + +  L+L +NQLK    +  +L  L +L LSNN L  LP +IG +  LR+L L  
Sbjct: 371 MGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEE 430

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLE 365
           N L T+ + +        L++L         ++       +IT+   +    + ++L L 
Sbjct: 431 NELETVPTEI------GFLQHL---------TKLWIQSNKIITLPRSIGNLCSLQDLRLG 475

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQV 407
             NL+AIP EI     +  L L+ NS +  LP EL+ C SL++
Sbjct: 476 ENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEI 518



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 143/293 (48%), Gaps = 27/293 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF--NS 102
            L++ I+  N+++ L  +L   LP +  +N+S N+L+  PA  G    + ++ ++   N 
Sbjct: 281 QLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAG-GPQQFVSTVTINMEHNQ 339

Query: 103 IMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           I KIP  I S AT L K +   N+L  LP  +G   ++++   S N +  LPED+     
Sbjct: 340 ISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVN 399

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L +  N+L  L N  I +   L EL   +N L  +P  IG L  L +L +  N+I++
Sbjct: 400 LEILVLSNNQLKKLPNQ-IGNLKKLRELDLEENELETVPTEIGFLQHLTKLWIQSNKIIT 458

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 281
           +P SI   CSL +  +G N L+A+P E+G L  L +L L+ N                  
Sbjct: 459 LPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDN------------------ 500

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
              +SL  LP E+    +L  + +  +PL  +   +  G    +++YL+ + P
Sbjct: 501 ---SSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 550


>gi|421120079|ref|ZP_15580393.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347165|gb|EKO98084.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 426

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 157/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NVLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 398 KLYLHNNPL 406



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 26/355 (7%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLQNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L TL  ++   
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENI--- 321

Query: 321 PTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                L+ L++  L  N+ +      E L  + +        L LE   L+A+P EI + 
Sbjct: 322 ---GQLQRLQTLYLGNNQLNVLPNKVEQLQNLES--------LDLEHNQLNALPKEIGKL 370

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKF-------SDLVTNKESCISGCYLYW 427
            ++  L+L  N +  LP E+    +L+  +       S+ +      +  C +Y+
Sbjct: 371 QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPLPSEKIERIRKLLPQCNIYF 425


>gi|417770611|ref|ZP_12418517.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|409947383|gb|EKN97381.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665930|gb|EMF31412.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 377

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 152/309 (49%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +L+LS    + +P E+   KN  E          +        +L+KL L+ N I+ + +
Sbjct: 50  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 109

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S
Sbjct: 110 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 169

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQ+K +P  + +   L      NN +T+LP+++     +  LD+  N+LT L    I  
Sbjct: 170 YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGH 228

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P  IG L  L  L+L  NR+ ++   I    +L    + +N L
Sbjct: 229 LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 288

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G+L  L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L+
Sbjct: 289 TTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQ 348

Query: 302 KLLLTGNPL 310
           +L L  N L
Sbjct: 349 ELFLNNNQL 357



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 53  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 112

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL  LP  +G+   L       N +T+LP+++     +  L++  N+
Sbjct: 113 KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 172

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  +    I     L  L    N L  +P+ IG L  L  LDL  NR+ ++P  I    +
Sbjct: 173 IKTIPKK-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQN 231

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L + Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  LDL +N L+  
Sbjct: 232 LQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTF 291

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P EIG++  L+ L L  N L TL
Sbjct: 292 PKEIGQLKNLQVLDLGSNQLTTL 314



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 143/337 (42%), Gaps = 61/337 (18%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++S N+   LP  IG+L  L+ L+++ N +  +P EIG    L K + S+NQ+K +P 
Sbjct: 50  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +   L      NN +T+LP+++    K+                    W     L  
Sbjct: 110 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQ-------------------W-----LYL 145

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            KN L  +P+ IG L  L  L+L  N+I +IP  I     L    + NN L+ LP E+G+
Sbjct: 146 PKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQ 205

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           L  L +LDL                      S N L+ LP EIG +  L+ L L  N L 
Sbjct: 206 LQNLQSLDL----------------------STNRLTTLPQEIGHLQNLQDLYLVSNQLT 243

Query: 312 TLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            L + +        LK L++  L  N  +  S   E L  +        K L L    L+
Sbjct: 244 ILPNEI------GQLKNLQTLNLRNNRLTTLSKEIEQLQNL--------KSLDLRSNQLT 289

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             P EI +   +  LDL  N +  LP  +    +LQ 
Sbjct: 290 TFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQT 326



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + + +  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 162 NLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 221

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 222 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 281

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 282 DLRSNQLTTFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 340

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 341 IGQLQNLQELFLNNNQLSS 359



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 101/207 (48%), Gaps = 18/207 (8%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 51  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 110

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 111 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 164

Query: 331 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 165 SLNLSYNQIKTIPKKIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 216

Query: 390 NSIQELPPELSSCASLQVKFSDLVTNK 416
           N +  LP E+    +LQ  +  LV+N+
Sbjct: 217 NRLTTLPQEIGHLQNLQDLY--LVSNQ 241


>gi|124003637|ref|ZP_01688486.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991206|gb|EAY30658.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 633

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 191/399 (47%), Gaps = 37/399 (9%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++   +Q L L  N + ++  ++  L  L  LN+++N+L+E P AI  L  LKSL++S N
Sbjct: 162 FQIPKIQTLCLQSNRLTEIPTEINQLTHLQELNLNNNQLTEFPLAITHLTTLKSLNLSGN 221

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
               +P  IG  + LV F   S+++K LP ++G   NL +   S+  I  LPE +    +
Sbjct: 222 KFHCVPVNIGKLSKLVTFTLKSDRIKALPETMGTLSNLQNLTLSSCRIQQLPESMQQLKQ 281

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           + KL ++ N++      +I   + L  L   KN L  +PE+IG+L +L  L L  N +  
Sbjct: 282 IGKLALDNNRIEKFP-AVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSLSNNHLKK 340

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVL 280
           +P SI     L    +  N L ALPA +GKLS+L  L+L  NQL     +  Q L L+ L
Sbjct: 341 LPDSIGNLAQLMVLSVARNQLDALPATIGKLSELRELNLEQNQLSCLPQQVTQILTLTQL 400

Query: 281 DLSNNSLSGLPPE-----------------------IGKMTTLRKLLLTGNPLRTL---- 313
            L+ N L+ LPP+                       +GK+  L +L + GN L  L    
Sbjct: 401 KLTYNKLTHLPPKLSNLQQLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGNKLTHLPPGI 460

Query: 314 ----RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN- 368
               R SL+N      L+ L   L + ++    +   + +T   ++    K+L L  +N 
Sbjct: 461 GNLHRLSLLNLSYNQ-LQVLPKSLGKLKNLHQLSVDGNKLTELPKIIYDLKKLFLLSLNY 519

Query: 369 --LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             L+A+P  I +  ++  L+L  N + +LP  +   + +
Sbjct: 520 NALTALPESIGQLSKVVHLNLEGNQLTQLPESIGQLSKV 558



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 144/290 (49%), Gaps = 25/290 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L++N+++KL + + NL  L VL+V+ N+L  LPA IG+L  L+ L++  N +  +
Sbjct: 328 LSHLSLSNNHLKKLPDSIGNLAQLMVLSVARNQLDALPATIGKLSELRELNLEQNQLSCL 387

Query: 107 PDEIGSATALVKFDCSSN-----------------------QLKELPSSLGRCLNLSDFK 143
           P ++     L +   + N                       QL+ LP SLG+  NL    
Sbjct: 388 PQQVTQILTLTQLKLTYNKLTHLPPKLSNLQQLSLLNLSYNQLQVLPKSLGKLKNLHQLS 447

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
              N +T LP  + +  ++S L++  N+L VL  +L      L +L    N L  +P+ I
Sbjct: 448 VDGNKLTHLPPGIGNLHRLSLLNLSYNQLQVLPKSL-GKLKNLHQLSVDGNKLTELPKII 506

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
             L +L  L L+ N + ++P SI     +    +  N L+ LP  +G+LSK+  L+L  N
Sbjct: 507 YDLKKLFLLSLNYNALTALPESIGQLSKVVHLNLEGNQLTQLPESIGQLSKVVHLNLEGN 566

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           QL +       +R L  L+L NN L+ LP  I K+  LR LLL  NP+ T
Sbjct: 567 QLTQLPKSIGNMRSLYALNLKNNQLTKLPQTIQKLRGLRFLLLDKNPIPT 616



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 182/412 (44%), Gaps = 47/412 (11%)

Query: 2   DRILKAARTSGSL-NLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           DRI     T G+L NL N +L            +  E  +  + +   KL L +N IEK 
Sbjct: 244 DRIKALPETMGTLSNLQNLTLSSC------RIQQLPESMQQLKQIG--KLALDNNRIEKF 295

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
              +  L  L  L +  N+L  LP +IG L  L  L +S N + K+PD IG+   L+   
Sbjct: 296 PAVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSLSNNHLKKLPDSIGNLAQLMVLS 355

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            + NQL  LP+++G+   L +     N ++ LP+ +     +++L +  NKLT L    +
Sbjct: 356 VARNQLDALPATIGKLSELRELNLEQNQLSCLPQQVTQILTLTQLKLTYNKLTHLPPK-L 414

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ++   L+ L  S N L  +P+++G L  L +L +  N++  +P  I     L+   +  N
Sbjct: 415 SNLQQLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGNKLTHLPPGIGNLHRLSLLNLSYN 474

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            L  LP  LGKL  L  L +  N+L E       L +L +L L+ N+L+ LP  IG+++ 
Sbjct: 475 QLQVLPKSLGKLKNLHQLSVDGNKLTELPKIIYDLKKLFLLSLNYNALTALPESIGQLSK 534

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           +  L L GN L                    ++LPE+    +                  
Sbjct: 535 VVHLNLEGNQL--------------------TQLPESIGQLSKVV--------------- 559

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
             L+LEG  L+ +P  I     +  L+L  N + +LP  +     L+    D
Sbjct: 560 -HLNLEGNQLTQLPKSIGNMRSLYALNLKNNQLTKLPQTIQKLRGLRFLLLD 610



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 76/144 (52%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L +  N + +L + + +L  L +L++++N L+ LP +IG+L  +  L++  N + +
Sbjct: 488 NLHQLSVDGNKLTELPKIIYDLKKLFLLSLNYNALTALPESIGQLSKVVHLNLEGNQLTQ 547

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+ IG  + +V  +   NQL +LP S+G   +L      NN +T LP+ +     +  L
Sbjct: 548 LPESIGQLSKVVHLNLEGNQLTQLPKSIGNMRSLYALNLKNNQLTKLPQTIQKLRGLRFL 607

Query: 166 DVEGNKLTVLSNNLIASWTMLTEL 189
            ++ N +       I  W   T++
Sbjct: 608 LLDKNPIPTHEKQRITDWLPQTQV 631


>gi|21358045|ref|NP_650306.1| flyers-cup, isoform B [Drosophila melanogaster]
 gi|5911290|gb|AAD55737.1|AF184226_1 BcDNA.GH09045 [Drosophila melanogaster]
 gi|7299797|gb|AAF54976.1| flyers-cup, isoform B [Drosophila melanogaster]
 gi|220952870|gb|ACL88978.1| CG9611-PB [synthetic construct]
          Length = 650

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 198/466 (42%), Gaps = 94/466 (20%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQKLI 51
           K AR SG+LNLSN++L  VP  +Y + +EA               E D WW  V L  L 
Sbjct: 61  KLARKSGTLNLSNKALARVPKRLY-DINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLD 119

Query: 52  LAHNNIEKLKEDLRNLPLLTVL-----------------------NVSHNKLSELPAAIG 88
           L+ N +  +   + NL  LTVL                       NVSHNKLS+LP A+ 
Sbjct: 120 LSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMY 179

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+ L++S+N  +++  +I     L   D   N ++ LP  +G  + L+      N 
Sbjct: 180 SLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNH 239

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I  LP DL +   + K+D+  N LT L                        PE +G L +
Sbjct: 240 IKELPPDLVNMRSLQKIDLMHNDLTSL------------------------PEDMGLLRK 275

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKE 267
           L  L L  N IL +P    G  +L E +  NN +  +P  +   L  L  LDL  N++ E
Sbjct: 276 LDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITE 334

Query: 268 YCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E C LR     D+SNN++S LP  +  +  L  L + GNP++T+R  ++   T  +L
Sbjct: 335 LPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRIL 394

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVT------------------------SKEL 362
           K L  R       E      D  + +  +SVT                        ++ L
Sbjct: 395 KTLHDRAVAKAKEEGGGV--DDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTL 452

Query: 363 SLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASL 405
           ++    L+++P ++++      +  +D +RN +  LP  L     L
Sbjct: 453 AVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDL 498



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 146/328 (44%), Gaps = 40/328 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N I +L ++L  L  L  L+VS+N +S LP  +  L  L SL V  N I  I
Sbjct: 322 LKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTI 381

Query: 107 PDEI---GSAT--------ALVKFDCSSNQLKELPSSLG------RCLNLSDFKASNNC- 148
             +I   G+          A+ K       + +  +S G      R   + D     N  
Sbjct: 382 RRDILQCGTTRILKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFP 441

Query: 149 -----------------ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTE 188
                            +TS+P+ +   ++   +  +D   N+L+ L N L     ++TE
Sbjct: 442 DRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTE 501

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L+ S N++  +P+ I   +R+  L+L  N +  +P+      +L E  + NN    +P  
Sbjct: 502 LVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNC 561

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           + +L  L  L    N +K   V   Q   RLS LDL NN +  +PP +G +T +  L L 
Sbjct: 562 VYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELV 621

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           GNP R  R  ++   T A++ YLR R+P
Sbjct: 622 GNPFRQPRHQILMKGTDAIMSYLRDRIP 649



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 18/155 (11%)

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL SN L     +   L+ L+VL L +N+L  LPPEIGK+  L +L ++ N L  L
Sbjct: 115 LNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQL 174

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM--NLSA 371
             ++ + P    L++L   +  NE  E +    DL  +            L+G   N+ +
Sbjct: 175 PRAMYSLPE---LRHLN--ISYNEFVELNPDISDLHMLEF----------LDGGHNNIQS 219

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +P  I     +T L L  N I+ELPP+L +  SLQ
Sbjct: 220 LPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQ 254


>gi|426235983|ref|XP_004011955.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Ovis
           aries]
          Length = 1246

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 166/313 (53%), Gaps = 17/313 (5%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S   + ++P+      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGTPLSRLPEGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A   +  +
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGA---LPND 199

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L+ S+NLL  +P+ IG L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  
Sbjct: 200 LLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHS 259

Query: 249 LGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           LGKL+KL  L++  N L+    E   C + LSVL L +N L+ LPPE+     L  L + 
Sbjct: 260 LGKLTKLTNLNVDRNHLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVA 318

Query: 307 GNPLRTLRSSLVN 319
           GN L++L  +L +
Sbjct: 319 GNRLQSLPFALTH 331



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 41/317 (12%)

Query: 93  LKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++S+D    S+  +P+EI   + +L +    +NQL+ELP    R LNL     S+N I  
Sbjct: 14  VESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQR 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP ++A+  ++ +LDV                        S+N +  +PE+I     L  
Sbjct: 74  LPPEVANFMQLVELDV------------------------SRNDIPEIPESIKFCKALEI 109

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D     +  +P   +   SLA   + + +L ALP ++G L+ L TL+L  N LK     
Sbjct: 110 ADFSGTPLSRLPEGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPAS 169

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
              L +L  LDL  N L  LP  +G +     LLL+ N L+ L   +      ++LK  +
Sbjct: 170 LSFLVKLEQLDLGGNDLEVLPDTLGALPN--DLLLSQNLLQRLPDGIGQLKQLSILKVDQ 227

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +RL   E +EA    E+L            EL L    L+A+P  + +  ++T L++ RN
Sbjct: 228 NRL--CEVTEAIGDCENL-----------SELILTENLLTALPHSLGKLTKLTNLNVDRN 274

Query: 391 SIQELPPELSSCASLQV 407
            ++ LPPE+  C +L V
Sbjct: 275 HLEALPPEIGGCVALSV 291


>gi|220942590|gb|ACL83838.1| CG9611-PB [synthetic construct]
          Length = 651

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 198/466 (42%), Gaps = 94/466 (20%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQKLI 51
           K AR SG+LNLSN++L  VP  +Y + +EA               E D WW  V L  L 
Sbjct: 61  KLARKSGTLNLSNKALARVPKRLY-DINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLD 119

Query: 52  LAHNNIEKLKEDLRNLPLLTVL-----------------------NVSHNKLSELPAAIG 88
           L+ N +  +   + NL  LTVL                       NVSHNKLS+LP A+ 
Sbjct: 120 LSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMY 179

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+ L++S+N  +++  +I     L   D   N ++ LP  +G  + L+      N 
Sbjct: 180 SLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNH 239

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I  LP DL +   + K+D+  N LT L                        PE +G L +
Sbjct: 240 IKELPPDLVNMRSLQKIDLMHNDLTSL------------------------PEDMGLLRK 275

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKE 267
           L  L L  N IL +P    G  +L E +  NN +  +P  +   L  L  LDL  N++ E
Sbjct: 276 LDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITE 334

Query: 268 YCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E C LR     D+SNN++S LP  +  +  L  L + GNP++T+R  ++   T  +L
Sbjct: 335 LPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRIL 394

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVT------------------------SKEL 362
           K L  R       E      D  + +  +SVT                        ++ L
Sbjct: 395 KTLHDRAVAKAKEEGGGV--DDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTL 452

Query: 363 SLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASL 405
           ++    L+++P ++++      +  +D +RN +  LP  L     L
Sbjct: 453 AVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDL 498



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 146/328 (44%), Gaps = 40/328 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N I +L ++L  L  L  L+VS+N +S LP  +  L  L SL V  N I  I
Sbjct: 322 LKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTI 381

Query: 107 PDEI---GSAT--------ALVKFDCSSNQLKELPSSLG------RCLNLSDFKASNNC- 148
             +I   G+          A+ K       + +  +S G      R   + D     N  
Sbjct: 382 RRDILQCGTTRILKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFP 441

Query: 149 -----------------ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTE 188
                            +TS+P+ +   ++   +  +D   N+L+ L N L     ++TE
Sbjct: 442 DRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTE 501

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L+ S N++  +P+ I   +R+  L+L  N +  +P+      +L E  + NN    +P  
Sbjct: 502 LVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNC 561

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           + +L  L  L    N +K   V   Q   RLS LDL NN +  +PP +G +T +  L L 
Sbjct: 562 VYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELV 621

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           GNP R  R  ++   T A++ YLR R+P
Sbjct: 622 GNPFRQPRHQILMKGTDAIMSYLRDRIP 649



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 18/155 (11%)

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL SN L     +   L+ L+VL L +N+L  LPPEIGK+  L +L ++ N L  L
Sbjct: 115 LNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQL 174

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM--NLSA 371
             ++ + P    L++L   +  NE  E +    DL  +            L+G   N+ +
Sbjct: 175 PRAMYSLPE---LRHLN--ISYNEFVELNPDISDLHMLEF----------LDGGHNNIQS 219

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +P  I     +T L L  N I+ELPP+L +  SLQ
Sbjct: 220 LPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQ 254


>gi|410941458|ref|ZP_11373255.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410783407|gb|EKR72401.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 425

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 186/393 (47%), Gaps = 48/393 (12%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           + Y+N  EA +  K     D++ L L  + +  L +++  L  L VLN+  N+L+ LP  
Sbjct: 35  QTYRNLTEALQNPK-----DVRILNLNGSKLATLSKEIGKLQNLQVLNLGFNQLTTLPNE 89

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           +G+L  L+ L++  N +  +P EIG    L   +   N+L  LP  +G+  NL +     
Sbjct: 90  VGQLQNLQVLNLYSNKLTILPKEIGKLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDL 149

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LPE++    K+  LD+EGN+LT                          P+ IG L
Sbjct: 150 NKLTILPEEIGQLQKLQILDLEGNQLTT------------------------FPKEIGKL 185

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
            +L  L+L  N++ ++   +    +L    + +N L+ LP E+G+L KL  L+L+  QLK
Sbjct: 186 QKLQVLNLGFNQLTTLREEVVQLQNLQILNLISNPLTTLPKEIGQLQKLQELNLYDIQLK 245

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
                  QL+ L  L+L+   L+ LP EIG+++ L+KL L GN L TL   +        
Sbjct: 246 TLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEI------GQ 299

Query: 326 LKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           LK L+   L  N         E L  + T        L LE   ++  P EI +   + +
Sbjct: 300 LKKLQELYLGNNPLRTLPKEIEQLQKLQT--------LHLESNQITTFPKEIGQLQNLQE 351

Query: 385 LDLSRNSIQELPPELSSCASLQ---VKFSDLVT 414
           L+L  N +  LP E+    +LQ   +KF+ L T
Sbjct: 352 LNLGFNQLTTLPKEIGQLQNLQELNLKFNQLAT 384



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 153/344 (44%), Gaps = 61/344 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L  +PNEV              +  +LQ L L  N +  L +++  L  L VL
Sbjct: 76  LNLGFNQLTTLPNEV-------------GQLQNLQVLNLYSNKLTILPKEIGKLRNLQVL 122

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+L+ LP  +G+L  L+ L++  N +  +P+EIG    L   D   NQL   P  +
Sbjct: 123 NLGFNRLTILPDEVGQLQNLQELNLDLNKLTILPEEIGQLQKLQILDLEGNQLTTFPKEI 182

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL---- 189
           G+   L       N +T+L E++     +  L++  N LT L    I     L EL    
Sbjct: 183 GKLQKLQVLNLGFNQLTTLREEVVQLQNLQILNLISNPLTTLPKE-IGQLQKLQELNLYD 241

Query: 190 IASKNLLNG-------------------MPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           I  K L  G                   +P+ IG LS+L +L L+ N++ ++P  I    
Sbjct: 242 IQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLK 301

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-------------- 276
            L E Y+GNN L  LP E+ +L KL TL L SNQ+  +  E  QL+              
Sbjct: 302 KLQELYLGNNPLRTLPKEIEQLQKLQTLHLESNQITTFPKEIGQLQNLQELNLGFNQLTT 361

Query: 277 ----------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
                     L  L+L  N L+ LP EIG+   LRKL L  NP+
Sbjct: 362 LPKEIGQLQNLQELNLKFNQLATLPKEIGQQQKLRKLNLYNNPI 405



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 55/105 (52%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L L +N +  L +++  L  L  L++  N+++  P  IG+L  L+ L++ FN +  +
Sbjct: 303 LQELYLGNNPLRTLPKEIEQLQKLQTLHLESNQITTFPKEIGQLQNLQELNLGFNQLTTL 362

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           P EIG    L + +   NQL  LP  +G+   L      NN I S
Sbjct: 363 PKEIGQLQNLQELNLKFNQLATLPKEIGQQQKLRKLNLYNNPIAS 407



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 78/185 (42%), Gaps = 40/185 (21%)

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L+ L  E+GKL  L  L+L  NQL     E  QL+ L VL+L +N L+ LP EIGK+  
Sbjct: 59  KLATLSKEIGKLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTILPKEIGKLRN 118

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L+ L L  N L  L   +  G    L                                  
Sbjct: 119 LQVLNLGFNRLTILPDEV--GQLQNL---------------------------------- 142

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV---KFSDLVTNK 416
           +EL+L+   L+ +P EI +  ++  LDL  N +   P E+     LQV    F+ L T +
Sbjct: 143 QELNLDLNKLTILPEEIGQLQKLQILDLEGNQLTTFPKEIGKLQKLQVLNLGFNQLTTLR 202

Query: 417 ESCIS 421
           E  + 
Sbjct: 203 EEVVQ 207


>gi|418730417|ref|ZP_13288911.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774626|gb|EKR54630.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 428

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 178/375 (47%), Gaps = 47/375 (12%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+  N   L +++  L  L  L +  N+L  LP  IG+L  L+ L++S N +  +P EIG
Sbjct: 55  LSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIG 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L + D   N+L  LP  +G+  NL     S+N +T+LP +      + +L++  N+
Sbjct: 115 KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L                        P+ IG L  L  L+L  N++ ++   I    +
Sbjct: 175 LTTL------------------------PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKN 210

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + +N L+ LP E+GKL  L TL+L  NQL    +E  +L+ L  L+LS+N L+ L
Sbjct: 211 LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTL 270

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLI 349
           P EIGK+  L  L L+GN L TL   +        L+ L+   L  N+ +  S   E L 
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLTTLSIEI------GKLQNLQDLNLHSNQLTTLSKEIEQLK 324

Query: 350 TMAT------RLSVTSKEL----SLEGMN-----LSAIPSEIWEAGEITKLDLSRNSIQE 394
            + T      RL +  KE+    +L+ +N     L+A+P EI +   +  L L +N +  
Sbjct: 325 NLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMT 384

Query: 395 LPPELSSCASLQVKF 409
            P E+    +LQ  +
Sbjct: 385 FPKEIGQLKNLQTLY 399



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 144/306 (47%), Gaps = 12/306 (3%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS+  L  +P E+ K  N       D     +        +LQ L L+ N +  L  +
Sbjct: 99  LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE 158

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
              L  L  LN+S N+L+ LP  IG+L  L++L++  N +  +  EI     L   + S 
Sbjct: 159 SGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSD 218

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL     S N +T+L  ++     +  L++  N+LT L    I   
Sbjct: 219 NQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIE-IGKL 277

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S N L  +   IG L  L  L+LH N++ ++   I    +L    +  N L 
Sbjct: 278 QNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 337

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L  L+L +NQL    +E  QL+ L  L L  N L   P EIG++  L+ 
Sbjct: 338 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQT 397

Query: 303 LLLTGN 308
           L L G+
Sbjct: 398 LYLGGH 403



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 145/337 (43%), Gaps = 58/337 (17%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + KL +  N+L  L    I     L 
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKE-IGQLKNLQ 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY----------- 236
           EL  S N L  +P+ IG L  L RLDL+ NR+  +P  I    +L   Y           
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 237 ------------MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
                       + +N L+ LP E+G+L  L TL+L SNQL     E  QL+ L  L+LS
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---SSLVNGPT-----------PALLKYL 329
           +N L+ LP EIGK+  L  L L+GN L TL      L N  T           P  +  L
Sbjct: 218 DNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKL 277

Query: 330 RSRLPENEDSEASTT----------KEDLITMATRLSVTSKE---------LSLEGMNLS 370
           ++    N      TT           +DL   + +L+  SKE         LSL    L 
Sbjct: 278 QNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 337

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +P EI +   + +L+L  N +  LP E+    +LQ 
Sbjct: 338 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQT 374



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 259 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSGNQLTTLSIEIGKLQNLQD 305

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ L   I +L  L++L +S+N ++ +P EIG    L + +  +NQL  LP  
Sbjct: 306 LNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 365

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           +G+  NL       N + + P+++     +  L + G+
Sbjct: 366 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 403


>gi|418698174|ref|ZP_13259153.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762878|gb|EKR29037.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 430

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 173/355 (48%), Gaps = 24/355 (6%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +LN+S    + LP  I +L  L+ L +  N +  +P EIG    L + + SSNQL  LP 
Sbjct: 54  ILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPK 113

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL      +N +T LP ++     +  L +  N+LT L          L EL  
Sbjct: 114 EIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE-SGKLGNLQELNL 172

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P+ IG L  L  L+L  N++ ++   I    +L    + +N L+ LP E+GK
Sbjct: 173 SDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGK 232

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL+L  NQL    +E  +L+ L  L+LS+N L+ LP EIGK+  L  L L+GN L
Sbjct: 233 LQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQL 292

Query: 311 RTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMAT------RLSVTSKEL- 362
            TL   +        L+ L+   L  N+ +  S   E L  + T      RL +  KE+ 
Sbjct: 293 TTLPIEI------GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIG 346

Query: 363 ---SLEGMN-----LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
              +L+ +N     L+A+P EI +   +  L L +N +   P E+    +LQ  +
Sbjct: 347 QLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLY 401



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 144/306 (47%), Gaps = 12/306 (3%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS+  L  +P E+ K  N       D     +        +LQ L L+ N +  L  +
Sbjct: 101 LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE 160

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
              L  L  LN+S N+L+ LP  IG+L  L++L++  N +  +  EI     L   + S 
Sbjct: 161 SGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSD 220

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL     S+N +  L  ++     +  L++  N+LT L    I   
Sbjct: 221 NQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIE-IGKL 279

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S N L  +P  IG L  L  L+LH N++ ++   I    +L    +  N L 
Sbjct: 280 QNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 339

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L  L+L +NQL    +E  QL+ L  L L  N L   P EIG++  L+ 
Sbjct: 340 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQT 399

Query: 303 LLLTGN 308
           L L G+
Sbjct: 400 LYLGGH 405



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 136/305 (44%), Gaps = 40/305 (13%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + KL +  N+L  L    I     L 
Sbjct: 41  DLTKALQNPLNVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKE-IGQLKNLQ 99

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY----------- 236
           EL  S N L  +P+ IG L  L RLDL+ NR+  +P  I    +L   Y           
Sbjct: 100 ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 159

Query: 237 ----MGN--------NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
               +GN        N L+ LP E+G+L  L TL+L SNQL     E  QL+ L  L+LS
Sbjct: 160 ESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 219

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS 342
           +N L+ LP EIGK+  L  L L+ N L  L   +        L+ L +  L +N+ +   
Sbjct: 220 DNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEV------GKLQNLHTLNLSDNQLTTLP 273

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                L  + T        L+L G  L+ +P EI +   +  L+L  N +  L  E+   
Sbjct: 274 IEIGKLQNLHT--------LNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQL 325

Query: 403 ASLQV 407
            +LQ 
Sbjct: 326 KNLQT 330



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 10/170 (5%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +LNLS+  L  +P E+ K  N       D     +        +L  L L+ N +  L  
Sbjct: 215 TLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPI 274

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+S N+L+ LP  IG+L  L+ L++  N +  +  EI     L     S
Sbjct: 275 EIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLS 334

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            N+L  LP  +G+  NL +    NN +T+LP ++     +  L +  N+L
Sbjct: 335 YNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRL 384



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 261 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSGNQLTTLPIEIGKLQNLQD 307

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ L   I +L  L++L +S+N ++ +P EIG    L + +  +NQL  LP  
Sbjct: 308 LNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 367

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           +G+  NL       N + + P+++     +  L + G+
Sbjct: 368 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 405


>gi|195056017|ref|XP_001994909.1| GH17496 [Drosophila grimshawi]
 gi|261277886|sp|B4JTV9.1|SUR8_DROGR RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|193892672|gb|EDV91538.1| GH17496 [Drosophila grimshawi]
          Length = 622

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 191/397 (48%), Gaps = 30/397 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ +Y+                L  L L  N I  + +DLR L  LT+L
Sbjct: 215 LDLRHNKLAEIPSVIYR-------------LRSLTTLYLRFNRITTVADDLRQLVNLTML 261

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL +AIG L  L +LDVS N +  +P++IG+   L   D   N+L ++P S+
Sbjct: 262 SLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 321

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L       N +  +P  L +C  M + +VEGN +T L + ++AS + LT +  S+
Sbjct: 322 GNLKSLVRLGLRYNRLNCVPVSLKNCKSMDEFNVEGNGITQLPDGMLASLSALTSITLSR 381

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P       + +  ++L  NRI  IP  I S    L +  M  N L+ALP ++G 
Sbjct: 382 NQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDVGT 441

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              +  L+L +N L++   +   L+ L +L LSNN L  +P  IG +  LR L L  N +
Sbjct: 442 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRI 501

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +       LL  L+  + +             ++  T LSV+         NL 
Sbjct: 502 EVLPHEI------GLLHELQRLILQTNQITMLPRSVGHLSNLTHLSVSEN-------NLQ 548

Query: 371 AIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQ 406
            +P EI     +  L +++N  +++LP EL+ C +L+
Sbjct: 549 FLPEEIGSLESLENLYINQNPGLEKLPFELALCQNLK 585



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 207/453 (45%), Gaps = 73/453 (16%)

Query: 3   RILKAARTSG--SLNLSNRSLRDVPN---------EVYKNFDEAGE-GDKWWEAVDLQKL 50
           + L+  R  G   L+LS  S+  +PN         E+Y   ++ G+   +    V+L+ L
Sbjct: 133 KALQRCRDEGIKRLDLSKSSITVLPNTVRECVHLTELYLYSNKIGQLPTEIGCLVNLRNL 192

Query: 51  ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI 110
            L  N++  L E L++   L VL++ HNKL+E+P+ I  L  L +L + FN I  + D++
Sbjct: 193 ALNENSLTSLPESLKHCTQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITTVADDL 252

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
                L       N++KEL S++G  +NL+    S+N +  LPED+ +C  +S LD++ N
Sbjct: 253 RQLVNLTMLSLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHN 312

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +L                          +P++IG+L  L+RL L  NR+  +P S+  C 
Sbjct: 313 ELL------------------------DIPDSIGNLKSLVRLGLRYNRLNCVPVSLKNCK 348

Query: 231 SLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYC---------VEACQLR---- 276
           S+ EF +  N ++ LP   L  LS L ++ L  NQ   Y          V +  L     
Sbjct: 349 SMDEFNVEGNGITQLPDGMLASLSALTSITLSRNQFTSYPTGGPAQFTNVYSINLEHNRI 408

Query: 277 -------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
                        L+ L++  N L+ LP ++G    + +L L  N L+ L   ++N    
Sbjct: 409 DKIPYGIFSRAKGLTKLNMKENMLTALPLDVGTWVNMVELNLATNALQKLPDDIMNLQNL 468

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITM-ATRLSVTSKELS---------LEGMNLSAIP 373
            +L    + L +  ++  +  K  ++ +   R+ V   E+          L+   ++ +P
Sbjct: 469 EILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLP 528

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             +     +T L +S N++Q LP E+ S  SL+
Sbjct: 529 RSVGHLSNLTHLSVSENNLQFLPEEIGSLESLE 561



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 169/364 (46%), Gaps = 39/364 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           +++L L+ ++I  L   +R    LT L +  NK+ +LP  IG L  L++L ++ NS+  +
Sbjct: 143 IKRLDLSKSSITVLPNTVRECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSL 202

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +   T L   D   N+L E+PS + R  +L+      N IT++ +DL     ++ L 
Sbjct: 203 PESLKHCTQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITTVADDLRQLVNLTMLS 262

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK+  L +  I +   LT L  S N L  +PE IG+   L  LDL  N +L IP SI
Sbjct: 263 LRENKIKELGS-AIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 321

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSN 284
               SL    +  N L+ +P  L     +   ++  N + +    + A    L+ + LS 
Sbjct: 322 GNLKSLVRLGLRYNRLNCVPVSLKNCKSMDEFNVEGNGITQLPDGMLASLSALTSITLSR 381

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEAST 343
           N  +  P              TG P +      +N      L++ R  ++P    S A  
Sbjct: 382 NQFTSYP--------------TGGPAQFTNVYSIN------LEHNRIDKIPYGIFSRAKG 421

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                    T+L++       E M L+A+P ++     + +L+L+ N++Q+LP ++ +  
Sbjct: 422 --------LTKLNMK------ENM-LTALPLDVGTWVNMVELNLATNALQKLPDDIMNLQ 466

Query: 404 SLQV 407
           +L++
Sbjct: 467 NLEI 470


>gi|456825387|gb|EMF73783.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 428

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 178/375 (47%), Gaps = 47/375 (12%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+  N   L +++  L  L  L +  N+L  LP  IG+L  L+ L++S N +  +P EIG
Sbjct: 55  LSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIG 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L + D   N+L  LP  +G+  NL     S+N +T+LP +      + +L++  N+
Sbjct: 115 KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L                        P+ IG L  L  L+L  N++ ++   I    +
Sbjct: 175 LTTL------------------------PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKN 210

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + +N L+ LP E+GKL  L TL+L  NQL    +E  +L+ L  L+LS+N L+ L
Sbjct: 211 LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTL 270

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLI 349
           P EIGK+  L  L L+GN L TL   +        L+ L+   L  N+ +  S   E L 
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLTTLSIEI------GKLQNLQDLNLHSNQLTTLSKEIEQLK 324

Query: 350 TMAT------RLSVTSKEL----SLEGMN-----LSAIPSEIWEAGEITKLDLSRNSIQE 394
            + T      RL +  KE+    +L+ +N     L+A+P EI +   +  L L +N +  
Sbjct: 325 NLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMT 384

Query: 395 LPPELSSCASLQVKF 409
            P E+    +LQ  +
Sbjct: 385 FPKEIGQLKNLQTLY 399



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 144/306 (47%), Gaps = 12/306 (3%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS+  L  +P E+ K  N       D     +        +LQ L L+ N +  L  +
Sbjct: 99  LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE 158

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
              L  L  LN+S N+L+ LP  IG+L  L++L++  N +  +  EI     L   + S 
Sbjct: 159 SGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSD 218

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL     S N +T+L  ++     +  L++  N+LT L    I   
Sbjct: 219 NQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIE-IGKL 277

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S N L  +   IG L  L  L+LH N++ ++   I    +L    +  N L 
Sbjct: 278 QNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 337

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L  L+L +NQL    +E  QL+ L  L L  N L   P EIG++  L+ 
Sbjct: 338 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQT 397

Query: 303 LLLTGN 308
           L L G+
Sbjct: 398 LYLGGH 403



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 145/337 (43%), Gaps = 58/337 (17%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + KL +  N+L  L    I     L 
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKE-IGQLKNLQ 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY----------- 236
           EL  S N L  +P+ IG L  L RLDL+ NR+  +P  I    +L   Y           
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 237 ------------MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
                       + +N L+ LP E+G+L  L TL+L SNQL     E  QL+ L  L+LS
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---SSLVNGPT-----------PALLKYL 329
           +N L+ LP EIGK+  L  L L+GN L TL      L N  T           P  +  L
Sbjct: 218 DNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKL 277

Query: 330 RSRLPENEDSEASTT----------KEDLITMATRLSVTSKE---------LSLEGMNLS 370
           ++    N      TT           +DL   + +L+  SKE         LSL    L 
Sbjct: 278 QNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 337

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +P EI +   + +L+L  N +  LP E+    +LQ 
Sbjct: 338 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQT 374



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 259 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSGNQLTTLSIEIGKLQNLQD 305

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ L   I +L  L++L +S+N ++ +P EIG    L + +  +NQL  LP  
Sbjct: 306 LNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 365

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           +G+  NL       N + + P+++     +  L + G+
Sbjct: 366 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 403


>gi|410451628|ref|ZP_11305630.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014394|gb|EKO76524.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 350

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 13/312 (4%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY++F+EA +      A+D++ L L  N +  L +++  L  L  LN+ +N+ + LP 
Sbjct: 24  NKVYRDFNEALKN-----AMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQ 78

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            IG L  L+SL +  N +  +P EIG    L   D   N+L+ LP  +G+  NL      
Sbjct: 79  EIGTLQNLQSLSLESNRLESLPKEIGRLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLV 138

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +N +T+LP+++     +  L +  ++LT      I +   L EL  S   L   P+ IG 
Sbjct: 139 DNHLTTLPQEIGTLQNLKGLYLSNSRLTTFLQE-IGTLQNLKELSLSSTQLTTFPKEIGQ 197

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L +L  L L   +++++   I    +L    + +N  +  P E+GKL KL  L L  N+L
Sbjct: 198 LQKLEELYLPSTQLVTLSKEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLFLEHNRL 257

Query: 266 KEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                E   L+  V L+L+NN L  LP  IG++ +L+ L L+GNP  T    +V      
Sbjct: 258 TTLSEEIVGLQKIVKLNLANNQLRTLPQGIGQLQSLKDLNLSGNPFTTFPQEIVG----- 312

Query: 325 LLKYLRSRLPEN 336
            LK+L+  + EN
Sbjct: 313 -LKHLKRLVLEN 323



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 109/249 (43%), Gaps = 18/249 (7%)

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           K D E NK+    N  + +   +  L    N L  +P+ IG L +L  L+L  N+  ++P
Sbjct: 18  KRDAEKNKVYRDFNEALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALP 77

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
             I    +L    + +N L +LP E+G+L  L  LDL  N+L+    E  QL+ L  L L
Sbjct: 78  QEIGTLQNLQSLSLESNRLESLPKEIGRLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYL 137

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
            +N L+ LP EIG +  L+ L L+ + L T    +        L+ L+         E S
Sbjct: 138 VDNHLTTLPQEIGTLQNLKGLYLSNSRLTTFLQEI------GTLQNLK---------ELS 182

Query: 343 TTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
            +   L T    +    K  EL L    L  +  EI +   +  LDLS N     P E+ 
Sbjct: 183 LSSTQLTTFPKEIGQLQKLEELYLPSTQLVTLSKEIGQLQNLKLLDLSDNQFTTFPKEIG 242

Query: 401 SCASLQVKF 409
               L+  F
Sbjct: 243 KLRKLEYLF 251


>gi|418712108|ref|ZP_13272853.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791375|gb|EKR85051.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 380

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 152/309 (49%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +L+LS    + +P E+   KN  E          +        +L+KL L+ N I+ + +
Sbjct: 53  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 112

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S
Sbjct: 113 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 172

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQ+K +P  + +   L      NN +T+LP+++     +  LD+  N+LT L    I  
Sbjct: 173 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGH 231

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P  IG L  L  L+L  NR+ ++   I    +L    + +N L
Sbjct: 232 LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 291

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G+L  L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L+
Sbjct: 292 TIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQ 351

Query: 302 KLLLTGNPL 310
           +L L  N L
Sbjct: 352 ELFLNNNQL 360



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 145/288 (50%), Gaps = 7/288 (2%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           E Y +  +A +       +DL     + N  + L +++  L  L  LN++ N+L+ LP  
Sbjct: 36  ETYTDLTKALQNPLKVRTLDL-----SANRFKTLPKEIGKLKNLQELNLNKNQLTILPKE 90

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG+L  L+ L++S N I  IP EI     L      +NQL  LP  +G+   L       
Sbjct: 91  IGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPK 150

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP+++     +  L++  N++  +    I     L  L    N L  +P+ IG L
Sbjct: 151 NQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQL 209

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  LDL  NR+ ++P  I    +L + Y+ +N L+ LP E+G+L  L TL+L +N+L 
Sbjct: 210 QNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLT 269

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
               E  QL+ L  LDL +N L+  P EIG++  L+ L L  N L TL
Sbjct: 270 TLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTL 317



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 152/330 (46%), Gaps = 15/330 (4%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           ++L  A+     +++LD+S N    +P EIG    L + + + NQL  LP  +G+  NL 
Sbjct: 39  TDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 98

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               S N I ++P+++    K+  L +  N+LT L    I     L  L   KN L  +P
Sbjct: 99  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWLYLPKNQLTTLP 157

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L  L  L+L  N+I +IP  I     L    + NN L+ LP E+G+L  L +LDL
Sbjct: 158 QEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDL 217

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +N+L     E   L+ L  L L +N L+ LP EIG++  L+ L L  N L TL   +  
Sbjct: 218 STNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQ 277

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                 LK L  R      S   T     I     L V    L L    L+ +P  I + 
Sbjct: 278 LQN---LKSLDLR------SNQLTIFPKEIGQLKNLQV----LDLGSNQLTTLPEGIGQL 324

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKF 409
             +  LDL  N +  LP E+    +LQ  F
Sbjct: 325 KNLQTLDLDSNQLTTLPQEIGQLQNLQELF 354



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + +++  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 165 NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 224

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 225 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 284

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT+     I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 285 DLRSNQLTIFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 343

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 344 IGQLQNLQELFLNNNQLSS 362


>gi|341886752|gb|EGT42687.1| CBN-LET-413 protein [Caenorhabditis brenneri]
          Length = 711

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 155/302 (51%), Gaps = 17/302 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+  ++ D+P E  KN               L  L L  N   +L E +     +T+L
Sbjct: 87  LNLNRNTITDIP-ETLKNCKL------------LTNLHLNGNPFTRLPESICECTSITIL 133

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +++   L+ LPA IG L  L+ LD   N +  IP+ I     L + D   N+++ELP  +
Sbjct: 134 SLNDTTLTILPANIGLLVNLRVLDARENHLRTIPNSIAELKNLEELDLGQNEIEELPQKI 193

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L +F    N + SLP+ ++DC  + +LDV  N+L+ L +NL  + T LT+L  S 
Sbjct: 194 GKLTSLREFYVDTNFLQSLPDSISDCRNLDQLDVSDNRLSRLPDNL-GNMTSLTDLNISS 252

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +P +IG+L RL  L   +N +  +   I  C SL E Y+G N LS LP  +G L 
Sbjct: 253 NEIIELPSSIGNLKRLQMLKAERNSLTQLAPEIGQCQSLTEMYLGQNYLSDLPDTIGDLR 312

Query: 254 KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           +L TL++  N L E    +  C+  L+VL L  N L+ LP  IG+   +  L +  N L 
Sbjct: 313 QLTTLNVDCNNLSEIPETIGNCK-SLTVLSLRQNILTELPMTIGRCENMTVLDVASNKLP 371

Query: 312 TL 313
            L
Sbjct: 372 NL 373



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 195/409 (47%), Gaps = 53/409 (12%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R   S++ S+ +L+ +P ++++ F +            L+ L L  NNI++L   L  L 
Sbjct: 13  RQVDSVDRSSSNLQAIPTDIFR-FRK------------LEDLNLTMNNIKELDRRLFTLR 59

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L VL+VS N+LS LP  IG L  L  L+++ N+I  IP+ + +   L     + N    
Sbjct: 60  RLRVLDVSDNELSVLPPDIGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTR 119

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP S+  C +++    ++  +T LP ++     +  LD   N L  + N+ IA    L E
Sbjct: 120 LPESICECTSITILSLNDTTLTILPANIGLLVNLRVLDARENHLRTIPNS-IAELKNLEE 178

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L   +N +  +P+ IG L+ L    +  N + S+P SIS C +L +  + +N LS LP  
Sbjct: 179 LDLGQNEIEELPQKIGKLTSLREFYVDTNFLQSLPDSISDCRNLDQLDVSDNRLSRLPDN 238

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           LG ++ L  L++ SN++ E       L RL +L    NSL+ L PEIG+  +L ++ L  
Sbjct: 239 LGNMTSLTDLNISSNEIIELPSSIGNLKRLQMLKAERNSLTQLAPEIGQCQSLTEMYLGQ 298

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N                   YL S LP+        T  DL  + T        L+++  
Sbjct: 299 N-------------------YL-SDLPD--------TIGDLRQLTT--------LNVDCN 322

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           NLS IP  I     +T L L +N + ELP  +  C ++ V   D+ +NK
Sbjct: 323 NLSEIPETIGNCKSLTVLSLRQNILTELPMTIGRCENMTVL--DVASNK 369


>gi|149040409|gb|EDL94447.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
           [Rattus norvegicus]
          Length = 524

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 193/398 (48%), Gaps = 56/398 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D+RNLP L+ L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITAVEKDVRNLPRLSTL 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L+ +P  I     +T L L  N +  LP E+     +Q
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGRLLWMQ 520



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 14/197 (7%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +P S+     L E Y+ +N L +LPAE+G L  L TL L  N L    
Sbjct: 103 MRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L +L +LDL +N L  +P  + ++ +L  L L  N +  +   + N P  + L  
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLS- 221

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               + EN+  +      +L  + T        L +    L  +P EI    +IT LDL 
Sbjct: 222 ----IRENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCTQITNLDLQ 269

Query: 389 RNSIQELPPELSSCASL 405
            N + +LP  + + +SL
Sbjct: 270 HNELLDLPDTIGNLSSL 286



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 13/128 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+   L  +P +V      +G        V L+ LIL++N ++KL   L NL  L  L
Sbjct: 407 LNLATNQLTKIPEDV------SG-------LVSLEVLILSNNLLKKLPHGLGNLRKLREL 453

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NKL  LP  I  L  L+ L ++ N +  +P  IG  T L       N L  LP  +
Sbjct: 454 DLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513

Query: 134 GRCLNLSD 141
           GR L + D
Sbjct: 514 GRLLWMQD 521


>gi|31543701|ref|NP_062632.2| leucine-rich repeat protein SHOC-2 [Mus musculus]
 gi|270341361|ref|NP_001161977.1| leucine-rich repeat protein SHOC-2 [Mus musculus]
 gi|51338746|sp|O88520.2|SHOC2_MOUSE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|26346735|dbj|BAC37016.1| unnamed protein product [Mus musculus]
 gi|29437101|gb|AAH49775.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Mus musculus]
 gi|52789459|gb|AAH83060.1| Shoc2 protein [Mus musculus]
 gi|74138728|dbj|BAE27179.1| unnamed protein product [Mus musculus]
 gi|94962414|gb|ABF48505.1| Shoc2 [Mus musculus]
 gi|148669769|gb|EDL01716.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
           [Mus musculus]
          Length = 582

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 204/401 (50%), Gaps = 36/401 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NLP L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLPKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N            +T  T L +        G N
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGL--------GEN 504

Query: 369 -LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
            L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 123/245 (50%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L+ +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 14/197 (7%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +P S+     L E Y+ +N L +LPAE+G L  L TL L  N L    
Sbjct: 103 MRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L +L +LDL +N L  +P  + ++ +L  L L  N + T+   + N P  ++L  
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLS- 221

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               + EN+  +      +L  + T        L +    L  +P EI    +IT LDL 
Sbjct: 222 ----IRENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCTQITNLDLQ 269

Query: 389 RNSIQELPPELSSCASL 405
            N + +LP  + + +SL
Sbjct: 270 HNDLLDLPDTIGNLSSL 286


>gi|242006348|ref|XP_002424013.1| leucine-rich repeat protein SHOC-2, putative [Pediculus humanus
           corporis]
 gi|212507305|gb|EEB11275.1| leucine-rich repeat protein SHOC-2, putative [Pediculus humanus
           corporis]
          Length = 608

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 196/407 (48%), Gaps = 48/407 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  VYK         ++             N I  + +D+RNL  LT+L
Sbjct: 197 LDLRHNKLNEIPEVVYKLTTLTTLFLRF-------------NRIRVVDDDIRNLSNLTML 243

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELP  IG L  L + DVS N +  +P EIG    L   D   N+L ++P ++
Sbjct: 244 SLRENKIKELPPGIGCLINLTTFDVSHNQLEHLPIEIGQCVQLSTLDLQHNELLDIPETI 303

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L+      N + ++P+ L +CS+M + +VEGN ++ L   L+AS + LT +  S+
Sbjct: 304 GNLQLLTRLGLRYNRLVTVPKSLCNCSRMDEFNVEGNSISNLPEGLLASLSDLTAITISR 363

Query: 194 NLLNGMPE-TIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N +   P       + +  ++L  N I  IP  I +   +LA+  M  N L++LP ++G 
Sbjct: 364 NNMTSYPSGGPAQFTNVHSINLEHNLIDKIPYGIFTRAKNLAKLNMKENQLTSLPLDIGT 423

Query: 252 LSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            + +  L+L +N+L +   +  C   L VL LSNN L  +P  +G +  LR L L  N +
Sbjct: 424 WTNMVELNLATNKLTKIPEDIQCLESLEVLILSNNMLKRIPAGMGNLRKLRILDLEENRI 483

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE--------- 361
             L         P  + +LR             TK  LI  + ++SV  +          
Sbjct: 484 EVL---------PNEIGFLR-----------DLTK--LIIHSNQISVLPRAIGHLSSLVY 521

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           LS+   NL+++P EI    ++  L ++ N ++  LP EL+ C +L +
Sbjct: 522 LSVGDNNLTSLPEEIGTLEKLESLYVNDNLNLHHLPFELALCKNLHI 568



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 156/334 (46%), Gaps = 23/334 (6%)

Query: 92  MLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++  LD+S +SI ++P  +   T L +F    N+L  LPS +G  +NL     S N +TS
Sbjct: 124 LVSRLDLSKSSITQLPSSVRDLTHLEEFYLYGNKLYSLPSEIGCLVNLQTLALSENSLTS 183

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LPE L     +  LD+  NKL  +   ++   T LT L    N +  + + I +LS L  
Sbjct: 184 LPESLVSLKSLKVLDLRHNKLNEIP-EVVYKLTTLTTLFLRFNRIRVVDDDIRNLSNLTM 242

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L L +N+I  +P  I    +L  F + +N L  LP E+G+  +L TLDL  N+L +    
Sbjct: 243 LSLRENKIKELPPGIGCLINLTTFDVSHNQLEHLPIEIGQCVQLSTLDLQHNELLDIPET 302

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL----------------- 313
              L+ L+ L L  N L  +P  +   + + +  + GN +  L                 
Sbjct: 303 IGNLQLLTRLGLRYNRLVTVPKSLCNCSRMDEFNVEGNSISNLPEGLLASLSDLTAITIS 362

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
           R+++ + P+    ++        E +        + T A  L+    +L+++   L+++P
Sbjct: 363 RNNMTSYPSGGPAQFTNVHSINLEHNLIDKIPYGIFTRAKNLA----KLNMKENQLTSLP 418

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +I     + +L+L+ N + ++P ++    SL+V
Sbjct: 419 LDIGTWTNMVELNLATNKLTKIPEDIQCLESLEV 452


>gi|456824980|gb|EMF73376.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 426

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 157/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 398 KLYLHNNPL 406



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 26/355 (7%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L TL  ++   
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENI--- 321

Query: 321 PTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                L+ L++  L  N+ +      E L  + +        L LE   L+A+P EI + 
Sbjct: 322 ---GQLQRLQTLYLGNNQLNFLPNKVEQLQNLES--------LDLEHNQLNALPKEIGKL 370

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKF-------SDLVTNKESCISGCYLYW 427
            ++  L+L  N +  LP E+    +L+  +       S+ +      +  C +Y+
Sbjct: 371 QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPLPSEKIERIRKLLPQCIIYF 425


>gi|3252981|gb|AAC40175.1| Ras-binding protein SUR-8 [Mus musculus]
          Length = 582

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 204/401 (50%), Gaps = 36/401 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NLP L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLPKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N            +T  T L +        G N
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGL--------GEN 504

Query: 369 -LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
            L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 505 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 123/245 (50%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L+ +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 14/197 (7%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +P S+     L E Y+ +N L +LPAE+G L  L TL L  N L    
Sbjct: 103 MRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L +L +LDL +N L  +P  + ++ +L  L L  N + T+   + N P  ++L  
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLS- 221

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               + EN+  +      +L  + T        L +    L  +P EI    +IT LDL 
Sbjct: 222 ----IRENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCTQITNLDLQ 269

Query: 389 RNSIQELPPELSSCASL 405
            N + +LP  + + +SL
Sbjct: 270 HNDLLDLPDTIGNLSSL 286


>gi|418723960|ref|ZP_13282794.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409962758|gb|EKO26492.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 426

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 164/328 (50%), Gaps = 12/328 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           KL L  NPL + + + +    P  + Y 
Sbjct: 398 KLYLHNNPLPSEKIARIRKLLPQCIIYF 425



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 26/355 (7%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L TL  ++   
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENI--- 321

Query: 321 PTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                L+ L++  L  N+ +      E L  + +        L LE   L+A+P EI + 
Sbjct: 322 ---GQLQRLQTLYLGNNQLNFLPNKVEQLQNLES--------LDLEHNQLNALPKEIGKL 370

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKF-------SDLVTNKESCISGCYLYW 427
            ++  L+L  N +  LP E+    +L+  +       S+ +      +  C +Y+
Sbjct: 371 QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPLPSEKIARIRKLLPQCIIYF 425


>gi|354497491|ref|XP_003510853.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
 gi|344249840|gb|EGW05944.1| Leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
          Length = 582

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 205/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P  VY+  D             L  L L  N I  +++D++NLP L++L
Sbjct: 174 LDLRHNKLREIPPVVYR-LD------------SLTTLYLRFNRITAVEKDIKNLPKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 4/195 (2%)

Query: 128 ELPSSLGRCL--NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
           E+   L RC   N +    S   I +LP  + + +++++L +  NKL  L   L     +
Sbjct: 89  EVMKELNRCREENSARLDLSKRSIHALPPSVKELTQLTELYLYSNKLQSLPAELGCLLNL 148

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           +T L  S+N L  +P+++ +L +L  LDL  N++  IP  +    SL   Y+  N ++A+
Sbjct: 149 MT-LALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPPVVYRLDSLTTLYLRFNRITAV 207

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
             ++  L KL  L +  N++K+   E  +L  L  LD+++N L  LP EIG  T +  L 
Sbjct: 208 EKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLD 267

Query: 305 LTGNPLRTLRSSLVN 319
           L  N L  L  ++ N
Sbjct: 268 LQHNELLDLPDTIGN 282



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562


>gi|456823237|gb|EMF71707.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 391

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 152/309 (49%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +L+LS    + +P E+   KN  E          +        +L+KL L+ N I+ + +
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 171

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQ+K +P  + +   L      NN +T+LP+++     +  LD+  N+LT L    I  
Sbjct: 172 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGH 230

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P  IG L  L  L+L  NR+ ++   I    +L    + +N L
Sbjct: 231 LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 290

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G+L  L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L+
Sbjct: 291 TIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQ 350

Query: 302 KLLLTGNPL 310
           +L L  N L
Sbjct: 351 ELFLNNNQL 359



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 137/263 (52%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 55  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL  LP  +G+   L       N +T+LP+++     +  L++  N+
Sbjct: 115 KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  +    I     L  L    N L  +P+ IG L  L  LDL  NR+ ++P  I    +
Sbjct: 175 IKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQN 233

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L + Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  LDL +N L+  
Sbjct: 234 LQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIF 293

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P EIG++  L+ L L  N L TL
Sbjct: 294 PKEIGQLKNLQVLDLGSNQLTTL 316



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 152/330 (46%), Gaps = 15/330 (4%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           ++L  A+     +++LD+S N    +P EIG    L + + + NQL  LP  +G+  NL 
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               S N I ++P+++    K+  L +  N+LT L    I     L  L   KN L  +P
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWLYLPKNQLTTLP 156

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L  L  L+L  N+I +IP  I     L    + NN L+ LP E+G+L  L +LDL
Sbjct: 157 QEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDL 216

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +N+L     E   L+ L  L L +N L+ LP EIG++  L+ L L  N L TL   +  
Sbjct: 217 STNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQ 276

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                 LK L  R      S   T     I     L V    L L    L+ +P  I + 
Sbjct: 277 LQN---LKSLDLR------SNQLTIFPKEIGQLKNLQV----LDLGSNQLTTLPEGIGQL 323

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKF 409
             +  LDL  N +  LP E+    +LQ  F
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELF 353



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + +++  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 164 NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 224 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT+     I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 284 DLRSNQLTIFPKE-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 342

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 343 IGQLQNLQELFLNNNQLSS 361


>gi|417770632|ref|ZP_12418538.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680646|ref|ZP_13241890.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327590|gb|EJO79835.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947404|gb|EKN97402.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665927|gb|EMF31409.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 333

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 130/243 (53%), Gaps = 25/243 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  I +L  LKSLD++ N    +P EIG    L + +  +NQLK LP 
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     S N +T+ P+++     + KL+++ N+LT          T+L E   
Sbjct: 112 EIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLT----------TLLQE--- 158

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                      IG L  L +L+L +NR+ ++P+ I    +L E Y+ NN L+ LP E+G+
Sbjct: 159 -----------IGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L  NQL     E  QL+ L +L   NN L+ LP EIG++  L++L L  N L
Sbjct: 208 LKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTTLPKEIGQLENLQELYLNDNQL 267

Query: 311 RTL 313
            TL
Sbjct: 268 TTL 270



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 138/270 (51%), Gaps = 14/270 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           +K  +   SL+L+N   + +P E+              +  +LQ+L L +N ++ L +++
Sbjct: 67  IKQLQNLKSLDLANNQFKTLPKEI-------------GQLQNLQELNLWNNQLKNLPKEI 113

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L +S N+L+  P  IG+L  L+ L++ +N +  +  EIG   +L K +   N
Sbjct: 114 GQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKN 173

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +LK LP+ +G+  NL +   SNN +T LPE++     +  L +  N+LT+L    I    
Sbjct: 174 RLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKE-IGQLQ 232

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L +  N L  +P+ IG L  L  L L+ N++ ++P  I    +L  F   NN L+ 
Sbjct: 233 NLKLLYSVNNELTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTM 292

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           LP E+G+L  L  L L++NQL     E  Q
Sbjct: 293 LPQEIGQLQNLQWLKLNNNQLSSQEEERIQ 322



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 135/267 (50%), Gaps = 2/267 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L ++++ L  L  L++++N+   LP  IG+L  L+ L++  N + 
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     S N+L   P  +G+  NL       N +T+L +++     + K
Sbjct: 108 NLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L+++ N+L  L N  I     L EL  S N L  +PE IG L  L  L L  N++  +P 
Sbjct: 168 LNLDKNRLKALPNE-IGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPK 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   Y  NN L+ LP E+G+L  L  L L+ NQL     E  QL+ L      
Sbjct: 227 EIGQLQNLKLLYSVNNELTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISF 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           NN L+ LP EIG++  L+ L L  N L
Sbjct: 287 NNQLTMLPQEIGQLQNLQWLKLNNNQL 313



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 128/274 (46%), Gaps = 22/274 (8%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP+++     +  LD+  N+   L    I     L EL    N
Sbjct: 51  RVLNLSSQK-----LTTLPKEIKQLQNLKSLDLANNQFKTLPKE-IGQLQNLQELNLWNN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+ IG L  L  L L  NR+ + P  I    +L +  +  N L+ L  E+G+L  
Sbjct: 105 QLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQS 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L  N+LK    E  QL+ L  L LSNN L+ LP EIG++  L+ L+L  N L  L
Sbjct: 165 LQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTIL 224

Query: 314 RSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                    P  +  L++ +L  + ++E +T  +++  +        +EL L    L+ +
Sbjct: 225 ---------PKEIGQLQNLKLLYSVNNELTTLPKEIGQLENL-----QELYLNDNQLTTL 270

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           P EI +   +       N +  LP E+    +LQ
Sbjct: 271 PKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQ 304



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 95/216 (43%), Gaps = 37/216 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ I  L  L  LDL  N+  ++P  I    +L E  + NN L  LP E+G+L  L
Sbjct: 60  LTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNL 119

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            TL L  N+L  +  E  QL+ L  L+L  N L+ L  EIG++ +L+KL L  N L+ L 
Sbjct: 120 QTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALP 179

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           + +  G    L                                  +EL L    L+ +P 
Sbjct: 180 NEI--GQLQNL----------------------------------QELYLSNNQLTILPE 203

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFS 410
           EI +   +  L L  N +  LP E+    +L++ +S
Sbjct: 204 EIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYS 239


>gi|45551891|ref|NP_731852.2| flyers-cup, isoform A [Drosophila melanogaster]
 gi|45446477|gb|AAF54977.3| flyers-cup, isoform A [Drosophila melanogaster]
          Length = 693

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 198/466 (42%), Gaps = 94/466 (20%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQKLI 51
           K AR SG+LNLSN++L  VP  +Y + +EA               E D WW  V L  L 
Sbjct: 104 KLARKSGTLNLSNKALARVPKRLY-DINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLD 162

Query: 52  LAHNNIEKLKEDLRNLPLLTVL-----------------------NVSHNKLSELPAAIG 88
           L+ N +  +   + NL  LTVL                       NVSHNKLS+LP A+ 
Sbjct: 163 LSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMY 222

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+ L++S+N  +++  +I     L   D   N ++ LP  +G  + L+      N 
Sbjct: 223 SLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNH 282

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I  LP DL +   + K+D+  N LT L                        PE +G L +
Sbjct: 283 IKELPPDLVNMRSLQKIDLMHNDLTSL------------------------PEDMGLLRK 318

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKE 267
           L  L L  N IL +P    G  +L E +  NN +  +P  +   L  L  LDL  N++ E
Sbjct: 319 LDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITE 377

Query: 268 YCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E C LR     D+SNN++S LP  +  +  L  L + GNP++T+R  ++   T  +L
Sbjct: 378 LPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRIL 437

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVT------------------------SKEL 362
           K L  R       E      D  + +  +SVT                        ++ L
Sbjct: 438 KTLHDRAVAKAKEEGGGV--DDASTSAGISVTRLRGGQMDDGDIPGNFPDRYKLRHTRTL 495

Query: 363 SLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCASL 405
           ++    L+++P ++++      +  +D +RN +  LP  L     L
Sbjct: 496 AVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDL 541



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 146/328 (44%), Gaps = 40/328 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N I +L ++L  L  L  L+VS+N +S LP  +  L  L SL V  N I  I
Sbjct: 365 LKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTI 424

Query: 107 PDEI---GSAT--------ALVKFDCSSNQLKELPSSLG------RCLNLSDFKASNNC- 148
             +I   G+          A+ K       + +  +S G      R   + D     N  
Sbjct: 425 RRDILQCGTTRILKTLHDRAVAKAKEEGGGVDDASTSAGISVTRLRGGQMDDGDIPGNFP 484

Query: 149 -----------------ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTE 188
                            +TS+P+ +   ++   +  +D   N+L+ L N L     ++TE
Sbjct: 485 DRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTE 544

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L+ S N++  +P+ I   +R+  L+L  N +  +P+      +L E  + NN    +P  
Sbjct: 545 LVLSNNVIGYVPQFISQFTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNC 604

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           + +L  L  L    N +K   V   Q   RLS LDL NN +  +PP +G +T +  L L 
Sbjct: 605 VYELQGLEILIASENHIKMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELV 664

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           GNP R  R  ++   T A++ YLR R+P
Sbjct: 665 GNPFRQPRHQILMKGTDAIMSYLRDRIP 692



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 18/155 (11%)

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL SN L     +   L+ L+VL L +N+L  LPPEIGK+  L +L ++ N L  L
Sbjct: 158 LNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQL 217

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM--NLSA 371
             ++ + P    L++L   +  NE  E +    DL  +            L+G   N+ +
Sbjct: 218 PRAMYSLPE---LRHLN--ISYNEFVELNPDISDLHMLEF----------LDGGHNNIQS 262

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +P  I     +T L L  N I+ELPP+L +  SLQ
Sbjct: 263 LPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQ 297


>gi|417776853|ref|ZP_12424685.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410573349|gb|EKQ36399.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
          Length = 738

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 157/356 (44%), Gaps = 46/356 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S    + LP  I +L  L+ LD+  N +   P  I     L   D S N+L  LP+
Sbjct: 52  VLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPN 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +GR  NL +     N + + P+++     +  L+++ N+L  L                
Sbjct: 112 EIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P  IG L  L +L+L +NR+  +P  I    +L    + +N L+ LP E+G+
Sbjct: 156 --------PVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL L  NQL  +  E  QL  L  LDL+ N L  LP EIG++  L KL L GN +
Sbjct: 208 LQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQI 267

Query: 311 RTLRSSLVNGPTPALLKYLR------------SRLPENEDSEASTTK------EDLITMA 352
            TL         PA +  L+            + LP  E  +    K        L T+ 
Sbjct: 268 TTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPR-EIGQLQNLKSLDLGGNQLTTLP 326

Query: 353 TRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             ++     KEL L G  L+ +P EIWE   +T L L  N I  LP E+    +LQ
Sbjct: 327 REINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQ 382



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 185/415 (44%), Gaps = 57/415 (13%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG--------EGDKWWEAVDLQKLILAHNNIEKLKE 62
           SL+LS   L  +PNE+   +N  E G           +  +  +LQ L L  N +  L  
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPV 157

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+  N+L+ LP  IG+L  L++L++  N +  +P EIG    L     S
Sbjct: 158 EIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL   P  +G+  NL +   + N + +LP+++    K+ KL+++GN++T L       
Sbjct: 218 ENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTL------- 270

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                      N L  +P  IG L  L  L L  NR+ ++P  I    +L    +G N L
Sbjct: 271 --------PKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQL 322

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+ KL  L  L L+ N+L     E  +L  L++L L NN +S LP EI K   L+
Sbjct: 323 TTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQ 382

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L L GN L TL   +                            E+L     R+ +   E
Sbjct: 383 ELNLRGNRLVTLPGEI----------------------GELKLLEELNLENNRIKILPNE 420

Query: 362 L---------SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +         +L G  L++IP EI     +  L L  N ++ LP ++     L+V
Sbjct: 421 IGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 475



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 166/390 (42%), Gaps = 65/390 (16%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L +L++S+N+L+ LP  IG+L  LKSLD+  N +  +P EI     L +   + N+L  +
Sbjct: 289 LQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIV 348

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +    NL+  +  NN I++LP+++     + +L++ GN+L  L    I    +L EL
Sbjct: 349 PKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGE-IGELKLLEEL 407

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N +  +P  IG+L  L   +L  N++ SIP  I    +L   Y+ NN L  LP ++
Sbjct: 408 NLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 467

Query: 250 GKLSKLGTLDLHSN---------------------------------------------- 263
            KL  L  L+L  N                                              
Sbjct: 468 EKLQDLEVLNLLINPLLSKERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSL 527

Query: 264 -----QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                Q   +  E  +L+ L  L L + SL  LP EI ++  L  L L  N L++L   +
Sbjct: 528 SLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEI 587

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                  LL+ LRS      D  A+   E L     RL    + L L        P EIW
Sbjct: 588 ------GLLRNLRSL-----DIGANNEFEVLPKEIARLQ-NLRSLLLNQNRFKIFPKEIW 635

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQV 407
           E  ++  L+++ N +  LP ++     LQ+
Sbjct: 636 ELKKLVILNVNTNQLDALPEKIGRLKGLQM 665



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 137/307 (44%), Gaps = 37/307 (12%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT-------------- 173
           +L  +L   LN+     S    T+LP+++     + +LD+  N+L               
Sbjct: 39  DLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLES 98

Query: 174 --------VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
                   V+  N I     L EL   KN L   P+ IG L  L  L+L  N++ ++P  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVE 158

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L +  +  N L+ LP E+G+L  L TL+L  NQL    VE  QL+ L  L LS 
Sbjct: 159 IGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSE 218

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+  P EIG++  L++L L GN L+TL         P  +  L+     N D    TT
Sbjct: 219 NQLTTFPKEIGQLENLQELDLNGNQLKTL---------PKEIGQLQKLEKLNLDGNQITT 269

Query: 345 ---KEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                 L T+   +      + LSL    L+ +P EI +   +  LDL  N +  LP E+
Sbjct: 270 LPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI 329

Query: 400 SSCASLQ 406
           +   +L+
Sbjct: 330 NKLKNLK 336



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 181/414 (43%), Gaps = 37/414 (8%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG-EGDKW-------WEAVDLQKLILAHNNIEKLKE 62
           SL+L    L  +P E+   KN  E    G+K        WE  +L  L L +N I  L +
Sbjct: 314 SLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPK 373

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++     L  LN+  N+L  LP  IGEL +L+ L++  N I  +P+EIG+   L  F+ S
Sbjct: 374 EIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLS 433

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV--------EGNKLTV 174
            N+L  +P  +G   NL      NN + +LP  +     +  L++        E  K+  
Sbjct: 434 GNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSKERKKIQA 493

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L  N       + E    +NL   + + +  LS    L L   +    P  I    +L  
Sbjct: 494 LLPNCNIDLRDVEEGETYRNLNLALEQPLKILS----LSLEYQQFSLFPKEILRLKNLRS 549

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL-SNNSLSGLPP 292
             + + +L ALP E+ +L  L  L L  NQLK    E   LR L  LD+ +NN    LP 
Sbjct: 550 LSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPK 609

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EI ++  LR LLL  N  +           P  +  L+  +  N ++       + I   
Sbjct: 610 EIARLQNLRSLLLNQNRFKIF---------PKEIWELKKLVILNVNTNQLDALPEKIGRL 660

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             L +    L L    L+ +PSEI +   +T+L L  N I+ LP E++   +L+
Sbjct: 661 KGLQM----LDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLR 710



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 6/194 (3%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ + + S  P  I  L  L+SL +   S++ +P EI     L       NQLK LP  
Sbjct: 527 LSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKE 586

Query: 133 LGRCLNLSDFK-ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTEL 189
           +G   NL      +NN    LP+++A    +  L +  N+  +    +   W +  L  L
Sbjct: 587 IGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI---WELKKLVIL 643

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N L+ +PE IG L  L  LDL  NR+ ++PS I    +L E Y+  N +  LP E+
Sbjct: 644 NVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEI 703

Query: 250 GKLSKLGTLDLHSN 263
            +L  L  L L+ N
Sbjct: 704 ARLQNLRKLTLYEN 717



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 62/118 (52%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           A+N  E L +++  L  L  L ++ N+    P  I EL  L  L+V+ N +  +P++IG 
Sbjct: 600 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 659

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
              L   D S N+L  LPS +G+  NL++     N I +LPE++A    + KL +  N
Sbjct: 660 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 2/117 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L+L  N  +   +++  L  L +LNV+ N+L  LP  IG L  L+ LD+S N +  
Sbjct: 616 NLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTT 675

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +P EIG    L +     N++K LP  + R  NL       N I   P++L    K+
Sbjct: 676 LPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYENPIP--PQELDKIRKL 730



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           WE   L  L +  N ++ L E +  L  L +L++SHN+L+ LP+ IG+LH L  L + +N
Sbjct: 635 WELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYN 694

Query: 102 SIMKIPDEIGSATALVKFDCSSN 124
            I  +P+EI     L K     N
Sbjct: 695 RIKTLPEEIARLQNLRKLTLYEN 717


>gi|417762759|ref|ZP_12410747.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409941504|gb|EKN87133.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 738

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 157/356 (44%), Gaps = 46/356 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S    + LP  I +L  L+ LD+  N +   P  I     L   D S N+L  LP+
Sbjct: 52  VLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPN 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +GR  NL +     N + + P+++     +  L+++ N+L  L                
Sbjct: 112 EIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P  IG L  L +L+L +NR+  +P  I    +L    + +N L+ LP E+G+
Sbjct: 156 --------PVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL L  NQL  +  E  QL  L  LDL+ N L  LP EIG++  L KL L GN +
Sbjct: 208 LQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQI 267

Query: 311 RTLRSSLVNGPTPALLKYLR------------SRLPENEDSEASTTK------EDLITMA 352
            TL         PA +  L+            + LP  E  +    K        L T+ 
Sbjct: 268 TTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPR-EIGQLQNLKSLDLGGNQLTTLP 326

Query: 353 TRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             ++     KEL L G  L+ +P EIWE   +T L L  N I  LP E+    +LQ
Sbjct: 327 REINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQ 382



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 185/415 (44%), Gaps = 57/415 (13%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG--------EGDKWWEAVDLQKLILAHNNIEKLKE 62
           SL+LS   L  +PNE+   +N  E G           +  +  +LQ L L  N +  L  
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPV 157

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+  N+L+ LP  IG+L  L++L++  N +  +P EIG    L     S
Sbjct: 158 EIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL   P  +G+  NL +   + N + +LP+++    K+ KL+++GN++T L       
Sbjct: 218 ENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTL------- 270

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                      N L  +P  IG L  L  L L  NR+ ++P  I    +L    +G N L
Sbjct: 271 --------PKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQL 322

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+ KL  L  L L+ N+L     E  +L  L++L L NN +S LP EI K   L+
Sbjct: 323 TTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQ 382

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L L GN L TL   +                            E+L     R+ +   E
Sbjct: 383 ELNLRGNRLVTLPGEI----------------------GELKLLEELNLENNRIKILPNE 420

Query: 362 L---------SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +         +L G  L++IP EI     +  L L  N ++ LP ++     L+V
Sbjct: 421 IGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 475



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 167/390 (42%), Gaps = 65/390 (16%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L +L++S+N+L+ LP  IG+L  LKSLD+  N +  +P EI     L +   + N+L  +
Sbjct: 289 LQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIV 348

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +    NL+  +  NN I++LP+++     + +L++ GN+L  L    I    +L EL
Sbjct: 349 PKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGE-IGELKLLEEL 407

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N +  +P  IG+L  L   +L  N++ SIP  I    +L   Y+ NN L  LP ++
Sbjct: 408 NLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 467

Query: 250 GKLSKLGTLDLHSN---------------------------------------------- 263
            KL  L  L+L  N                                              
Sbjct: 468 EKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQPLKILSL 527

Query: 264 -----QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                Q   +  E  +L+ L  L L + SL  LP EI ++  L +L L  N L++L   +
Sbjct: 528 SLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEI 587

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                  LL+ LRS      D  A+   E L     RL    + L L        P EIW
Sbjct: 588 ------GLLRNLRSL-----DIGANNEFEVLPKEIARLQ-NLRSLLLNQNRFKIFPKEIW 635

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQV 407
           E  ++  L+++ N +  LP ++     LQ+
Sbjct: 636 ELKKLVILNVNTNQLDALPEKIGRLKGLQM 665



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 137/307 (44%), Gaps = 37/307 (12%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT-------------- 173
           +L  +L   LN+     S    T+LP+++     + +LD+  N+L               
Sbjct: 39  DLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLES 98

Query: 174 --------VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
                   V+  N I     L EL   KN L   P+ IG L  L  L+L  N++ ++P  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVE 158

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L +  +  N L+ LP E+G+L  L TL+L  NQL    VE  QL+ L  L LS 
Sbjct: 159 IGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSE 218

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+  P EIG++  L++L L GN L+TL         P  +  L+     N D    TT
Sbjct: 219 NQLTTFPKEIGQLENLQELDLNGNQLKTL---------PKEIGQLQKLEKLNLDGNQITT 269

Query: 345 ---KEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                 L T+   +      + LSL    L+ +P EI +   +  LDL  N +  LP E+
Sbjct: 270 LPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI 329

Query: 400 SSCASLQ 406
           +   +L+
Sbjct: 330 NKLKNLK 336



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 6/194 (3%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ + + S  P  I  L  L+SL +   S++ +P EI     L +     NQLK LP  
Sbjct: 527 LSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKE 586

Query: 133 LGRCLNLSDFK-ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTEL 189
           +G   NL      +NN    LP+++A    +  L +  N+  +    +   W +  L  L
Sbjct: 587 IGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI---WELKKLVIL 643

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N L+ +PE IG L  L  LDL  NR+ ++PS I    +L E Y+  N +  LP E+
Sbjct: 644 NVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEI 703

Query: 250 GKLSKLGTLDLHSN 263
            +L  L  L L+ N
Sbjct: 704 ARLQNLRKLTLYEN 717



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 179/388 (46%), Gaps = 65/388 (16%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG-EGDKW-------WEAVDLQKLILAHNNIEKLKE 62
           SL+L    L  +P E+   KN  E    G+K        WE  +L  L L +N I  L +
Sbjct: 314 SLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPK 373

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++     L  LN+  N+L  LP  IGEL +L+ L++  N I  +P+EIG+   L  F+ S
Sbjct: 374 EIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLS 433

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLP---EDLADCSKMSKL-------------- 165
            N+L  +P  +G   NL      NN + +LP   E L D   ++ L              
Sbjct: 434 GNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQA 493

Query: 166 ----------DVEGNK------------LTVLSNNL-IASWTML-TELIASKNL------ 195
                     DVE  +            L +LS +L    +++   E++  KNL      
Sbjct: 494 LLPNCNIDLRDVEEGRTYRNLNLALEQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLY 553

Query: 196 ---LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG-NNALSALPAELGK 251
              L  +P+ I  L  L RL L  N++ S+P  I    +L    +G NN    LP E+ +
Sbjct: 554 DTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIAR 613

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L +L L+ N+ K +  E  +L +L +L+++ N L  LP +IG++  L+ L L+ N L
Sbjct: 614 LQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRL 673

Query: 311 RTLRSSL--VNGPTPALLKYLRSR-LPE 335
            TL S +  ++  T   L+Y R + LPE
Sbjct: 674 TTLPSEIGQLHNLTELYLQYNRIKTLPE 701



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 62/118 (52%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           A+N  E L +++  L  L  L ++ N+    P  I EL  L  L+V+ N +  +P++IG 
Sbjct: 600 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 659

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
              L   D S N+L  LPS +G+  NL++     N I +LPE++A    + KL +  N
Sbjct: 660 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 2/117 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L+L  N  +   +++  L  L +LNV+ N+L  LP  IG L  L+ LD+S N +  
Sbjct: 616 NLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTT 675

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +P EIG    L +     N++K LP  + R  NL       N I   P++L    K+
Sbjct: 676 LPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYENPIP--PQELDKIRKL 730



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           WE   L  L +  N ++ L E +  L  L +L++SHN+L+ LP+ IG+LH L  L + +N
Sbjct: 635 WELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYN 694

Query: 102 SIMKIPDEIGSATALVKFDCSSN 124
            I  +P+EI     L K     N
Sbjct: 695 RIKTLPEEIARLQNLRKLTLYEN 717


>gi|421117624|ref|ZP_15577983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010838|gb|EKO68970.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 377

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 152/308 (49%), Gaps = 12/308 (3%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           L+LS    + +P E+   KN  E          +        +L+KL L+ N I+ + ++
Sbjct: 51  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S 
Sbjct: 111 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQ+K +P  + +   L      NN +T+LP+++     +  LD+  N+LT L    I   
Sbjct: 171 NQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGHL 229

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L +L    N L  +P  IG L  L  L+L  NR+ ++   I    +L    + +N L+
Sbjct: 230 QNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLT 289

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
             P E+G+L  L TL+L SNQL        QL+ L  LDL +N L+ LP EIG++  L++
Sbjct: 290 TFPKEIGQLKNLQTLNLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQE 349

Query: 303 LLLTGNPL 310
           L L  N L
Sbjct: 350 LFLNNNQL 357



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 133/265 (50%), Gaps = 23/265 (8%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S N+   LP  IG+L  L+ L+++ N +  +P EIG    L K + S+NQ+K +P 
Sbjct: 50  ILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------------ 179
            + +   L      NN +T+LP+++    K+  L +  N+LT L   +            
Sbjct: 110 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 169

Query: 180 ----------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
                     I     L  L    N L  +P+ IG L  L  LDL  NR+ ++P  I   
Sbjct: 170 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHL 229

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            +L + Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  LDL +N L+
Sbjct: 230 QNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLT 289

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTL 313
             P EIG++  L+ L L  N L TL
Sbjct: 290 TFPKEIGQLKNLQTLNLGSNQLTTL 314



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 146/327 (44%), Gaps = 33/327 (10%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S N    +P EIG    L + + + NQL  LP  +G+  NL     S N I ++
Sbjct: 48  VRILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTI 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++    K+  L +  N+LT L    I     L  L   KN L  +P+ IG L  L  L
Sbjct: 108 PKEIEKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSL 166

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L  N+I +IP  I     L    + NN L+ LP E+G+L  L +LDL            
Sbjct: 167 NLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDL------------ 214

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
                     S N L+ LP EIG +  L+ L L  N L  L + +        L    +R
Sbjct: 215 ----------STNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNR 264

Query: 333 LPE-NEDSEASTTKEDLITMATRLSVTSKEL----SLEGMN-----LSAIPSEIWEAGEI 382
           L   +++ E     + L   + +L+   KE+    +L+ +N     L+ +P  I +   +
Sbjct: 265 LTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGSNQLTTLPEGIGQLKNL 324

Query: 383 TKLDLSRNSIQELPPELSSCASLQVKF 409
             LDL  N +  LP E+    +LQ  F
Sbjct: 325 QTLDLDSNQLTTLPQEIGQLQNLQELF 351



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + +++  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 162 NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 221

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 222 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 281

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 282 DLRSNQLTTFPKE-IGQLKNLQTLNLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 340

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 341 IGQLQNLQELFLNNNQLSS 359



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 101/207 (48%), Gaps = 18/207 (8%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  NR  ++P  I    +L E  +  N L+ LP E+G+L  L  L+L +NQ+K    E
Sbjct: 51  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 110

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L +L  L L NN L+ LP EIG++  L+ L L  N L TL   +        LK L+
Sbjct: 111 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEI------GQLKNLK 164

Query: 331 S-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           S  L  N+        E L  + +        L L+   L+ +P EI +   +  LDLS 
Sbjct: 165 SLNLSYNQIKTIPKEIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLST 216

Query: 390 NSIQELPPELSSCASLQVKFSDLVTNK 416
           N +  LP E+    +LQ  +  LV+N+
Sbjct: 217 NRLTTLPQEIGHLQNLQDLY--LVSNQ 241


>gi|158335195|ref|YP_001516367.1| hypothetical protein AM1_2038 [Acaryochloris marina MBIC11017]
 gi|158305436|gb|ABW27053.1| leucine-rich repeat containing outermembrane protein, putative
           [Acaryochloris marina MBIC11017]
          Length = 659

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 194/399 (48%), Gaps = 41/399 (10%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +   L KL L  N +  L  ++  L  L  L+++ N+L+ LP+++ +L  L++LD+S N 
Sbjct: 105 QLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQLTNLPSSVTQLKELQTLDLSNNW 164

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EI     L + D   NQL  LP  + +  NL      +N ++SLP  +A  + +
Sbjct: 165 LKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNLQTLGLGHNTLSSLPATIAKLTNL 224

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            KLD+    L  L    I   T L EL  S N L+ +P  I  L  L  L L   ++   
Sbjct: 225 KKLDLRATSLKRLPPE-ILQLTKLQELDLSDNKLSSLPPEIAQLVNLQSLRLKFTQLSHP 283

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELG-----------------------KLSKLGTLD 259
           P+ +S    L E  +  N+LS+LP E+                        +L+ L +LD
Sbjct: 284 PAELSQLTHLQELDLSGNSLSSLPREMAKLKKLQKLDLSYNSLRNLPTVITQLTTLRSLD 343

Query: 260 LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           L S QL     E  QL  L  LDL +N L+ LP EIG +T L+KL L+       ++ L 
Sbjct: 344 LRSTQLNSLPPEIAQLINLQSLDLYDNPLTHLPQEIGTLTHLKKLNLS-------KTQLT 396

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
           N P PA++K  R +  +   ++ S+   ++  +     ++ KEL+L    LS +P++I +
Sbjct: 397 NLP-PAIMKLKRLQSLDFSGNQLSSLPIEITQI-----ISLKELNLSFNQLSKLPADIGQ 450

Query: 379 AGEITKLDLSRNSIQELPPE---LSSCASLQVKFSDLVT 414
              + +LDL  N +  LP E   L++  SL ++F+ L T
Sbjct: 451 LNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNT 489



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 199/428 (46%), Gaps = 50/428 (11%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+L+   L ++P+ V   K        + W +++         L++L L  N +  L  
Sbjct: 134 SLDLTANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGLPP 193

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L + HN LS LPA I +L  LK LD+   S+ ++P EI   T L + D S
Sbjct: 194 EIIKLNNLQTLGLGHNTLSSLPATIAKLTNLKKLDLRATSLKRLPPEILQLTKLQELDLS 253

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS------ 176
            N+L  LP  + + +NL   +     ++  P +L+  + + +LD+ GN L+ L       
Sbjct: 254 DNKLSSLPPEIAQLVNLQSLRLKFTQLSHPPAELSQLTHLQELDLSGNSLSSLPREMAKL 313

Query: 177 ----------NNLIASWTMLTELIASKNL------LNGMPETIGSLSRLIRLDLHQNRIL 220
                     N+L    T++T+L   ++L      LN +P  I  L  L  LDL+ N + 
Sbjct: 314 KKLQKLDLSYNSLRNLPTVITQLTTLRSLDLRSTQLNSLPPEIAQLINLQSLDLYDNPLT 373

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
            +P  I     L +  +    L+ LP  + KL +L +LD   NQL    +E  Q+  L  
Sbjct: 374 HLPQEIGTLTHLKKLNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQIISLKE 433

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL--VNGPTPALLKYLRSRLPENE 337
           L+LS N LS LP +IG++  L++L L  N L +L   +  +N     +L++         
Sbjct: 434 LNLSFNQLSKLPADIGQLNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRF--------- 484

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            ++ +T   D+  +        K LS+ G  LS++P EI +   +  L L  N +  LPP
Sbjct: 485 -NQLNTLPPDIGQLKNL-----KSLSIHGNTLSSLPPEIGKLSSLKSLILRSNRLSSLPP 538

Query: 398 ELSSCASL 405
           E+    +L
Sbjct: 539 EIGKLHNL 546



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 131/421 (31%), Positives = 206/421 (48%), Gaps = 36/421 (8%)

Query: 3   RILKAARTSGS-LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           RI +A  T  S L+L   SL  +P E+ +         K  E ++L+      N + +L 
Sbjct: 31  RIQQALATQASQLDLQGLSLTQLPLEIGQ--------LKHLEVLNLRD-----NQLSRLP 77

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++  L  LT L++  N+L+ LPA + +L  L  L + FN +  +P E+     L   D 
Sbjct: 78  PEIGQLIHLTTLDLCSNRLNRLPAEVTQLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDL 137

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           ++NQL  LPSS+ +   L     SNN + SLP ++A  +K+ +LD+  N+L+ L   +I 
Sbjct: 138 TANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIK 197

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L  L    N L+ +P TI  L+ L +LDL    +  +P  I     L E  + +N 
Sbjct: 198 -LNNLQTLGLGHNTLSSLPATIAKLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSDNK 256

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 300
           LS+LP E+ +L  L +L L   QL     E  QL  L  LDLS NSLS LP E+ K+  L
Sbjct: 257 LSSLPPEIAQLVNLQSLRLKFTQLSHPPAELSQLTHLQELDLSGNSLSSLPREMAKLKKL 316

Query: 301 RKLLLTGNPLRT---------------LRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           +KL L+ N LR                LRS+ +N   P + + +  +  +  D+  +   
Sbjct: 317 QKLDLSYNSLRNLPTVITQLTTLRSLDLRSTQLNSLPPEIAQLINLQSLDLYDNPLTHLP 376

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +++ T+ T L    K+L+L    L+ +P  I +   +  LD S N +  LP E++   SL
Sbjct: 377 QEIGTL-THL----KKLNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQIISL 431

Query: 406 Q 406
           +
Sbjct: 432 K 432



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 160/311 (51%), Gaps = 15/311 (4%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           ++    T  SL+L +  L  +P E+              + ++LQ L L  N +  L ++
Sbjct: 332 VITQLTTLRSLDLRSTQLNSLPPEIA-------------QLINLQSLDLYDNPLTHLPQE 378

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  LN+S  +L+ LP AI +L  L+SLD S N +  +P EI    +L + + S 
Sbjct: 379 IGTLTHLKKLNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQIISLKELNLSF 438

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL +LP+ +G+  NL +     N + SLP+++   + +  L +  N+L  L  + I   
Sbjct: 439 NQLSKLPADIGQLNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNTLPPD-IGQL 497

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L    N L+ +P  IG LS L  L L  NR+ S+P  I    +L    +  N LS
Sbjct: 498 KNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSNRLSSLPPEIGKLHNLNSLNLVENQLS 557

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
           +LP E+ KL  L  LDL +N+L+   +E  QL+ L ++DLS+N LS LP E+G++  L  
Sbjct: 558 SLPIEMRKLQNLRELDLRNNRLRNLPLEMGQLKSLGLVDLSDNQLSNLPKEMGQLYNLTV 617

Query: 303 LLLTGNPLRTL 313
           L L  N L  L
Sbjct: 618 LSLDRNQLSNL 628



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 137/265 (51%), Gaps = 2/265 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L+   +  L   +  L  L  L+ S N+LS LP  I ++  LK L++SFN + K+
Sbjct: 385 LKKLNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQIISLKELNLSFNQLSKL 444

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P +IG    L + D   N+L  LP  +G+  NL       N + +LP D+     +  L 
Sbjct: 445 PADIGQLNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNTLPPDIGQLKNLKSLS 504

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN L+ L    I   + L  LI   N L+ +P  IG L  L  L+L +N++ S+P  +
Sbjct: 505 IHGNTLSSLPPE-IGKLSSLKSLILRSNRLSSLPPEIGKLHNLNSLNLVENQLSSLPIEM 563

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               +L E  + NN L  LP E+G+L  LG +DL  NQL     E  QL  L+VL L  N
Sbjct: 564 RKLQNLRELDLRNNRLRNLPLEMGQLKSLGLVDLSDNQLSNLPKEMGQLYNLTVLSLDRN 623

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPL 310
            LS LP EI ++    K+ + GNPL
Sbjct: 624 QLSNLPIEIEQLWPSTKITVEGNPL 648



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 127/419 (30%), Positives = 188/419 (44%), Gaps = 53/419 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L   SL+ +P E+              +   LQ+L L+ N +  L  ++  L  L  L
Sbjct: 227 LDLRATSLKRLPPEI-------------LQLTKLQELDLSDNKLSSLPPEIAQLVNLQSL 273

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +   +LS  PA + +L  L+ LD+S NS+  +P E+     L K D S N L+ LP+ +
Sbjct: 274 RLKFTQLSHPPAELSQLTHLQELDLSGNSLSSLPREMAKLKKLQKLDLSYNSLRNLPTVI 333

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +   L      +  + SLP ++A    +  LD+  N LT L    I + T L +L  SK
Sbjct: 334 TQLTTLRSLDLRSTQLNSLPPEIAQLINLQSLDLYDNPLTHLPQE-IGTLTHLKKLNLSK 392

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
             L  +P  I  L RL  LD   N++ S+P  I+   SL E  +  N LS LPA++G+L+
Sbjct: 393 TQLTNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQIISLKELNLSFNQLSKLPADIGQLN 452

Query: 254 KLGTLDLHSNQLKEYCVEACQLR------------------------LSVLDLSNNSLSG 289
            L  LDL  N+L     E  QL                         L  L +  N+LS 
Sbjct: 453 NLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSS 512

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDL 348
           LPPEIGK+++L+ L+L  N L +L       P    L  L S  L EN+ S        L
Sbjct: 513 LPPEIGKLSSLKSLILRSNRLSSL------PPEIGKLHNLNSLNLVENQLSSLPIEMRKL 566

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             +        +EL L    L  +P E+ +   +  +DLS N +  LP E+    +L V
Sbjct: 567 QNL--------RELDLRNNRLRNLPLEMGQLKSLGLVDLSDNQLSNLPKEMGQLYNLTV 617



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 120/249 (48%), Gaps = 11/249 (4%)

Query: 14  LNLSNRSLRDVPNEVYK-----NFDEAGEG-----DKWWEAVDLQKLILAHNNIEKLKED 63
           LNLS   L ++P  + K     + D +G        +  + + L++L L+ N + KL  D
Sbjct: 388 LNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQIISLKELNLSFNQLSKLPAD 447

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L++  NKL  LP  IG+L+ LKSL + FN +  +P +IG    L       
Sbjct: 448 IGQLNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHG 507

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N L  LP  +G+  +L      +N ++SLP ++     ++ L++  N+L+ L    +   
Sbjct: 508 NTLSSLPPEIGKLSSLKSLILRSNRLSSLPPEIGKLHNLNSLNLVENQLSSLPIE-MRKL 566

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL    N L  +P  +G L  L  +DL  N++ ++P  +    +L    +  N LS
Sbjct: 567 QNLRELDLRNNRLRNLPLEMGQLKSLGLVDLSDNQLSNLPKEMGQLYNLTVLSLDRNQLS 626

Query: 244 ALPAELGKL 252
            LP E+ +L
Sbjct: 627 NLPIEIEQL 635


>gi|417760348|ref|ZP_12408374.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774427|ref|ZP_12422292.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675361|ref|ZP_13236652.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943915|gb|EKN89506.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575760|gb|EKQ38777.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577523|gb|EKQ45393.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 412

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 157/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 85  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 144

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 145 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 204

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 205 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQ 263

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N+++++P +I     L   Y+GNN L
Sbjct: 264 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQL 323

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 324 NFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 383

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 384 KLYLHNNPL 392



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 26/355 (7%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 73  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 132

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 133 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 190

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 191 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 250

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L TL  ++   
Sbjct: 251 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLITLPENI--- 307

Query: 321 PTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                L+ L++  L  N+ +      E L  + +        L LE   L+A+P EI + 
Sbjct: 308 ---GQLQRLQTLYLGNNQLNFLPNKVEQLQNLES--------LDLEHNQLNALPKEIGKL 356

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKF-------SDLVTNKESCISGCYLYW 427
            ++  L+L  N +  LP E+    +L+  +       S+ +      +  C +Y+
Sbjct: 357 QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPLPSEKIERIRKLLPQCNIYF 411


>gi|418672935|ref|ZP_13234265.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|410580042|gb|EKQ47873.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 738

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 157/356 (44%), Gaps = 46/356 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S    + LP  I +L  L+ LD+  N +   P  I     L   D S N+L  LP+
Sbjct: 52  VLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPN 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +GR  NL +     N + + P+++     +  L+++ N+L  L                
Sbjct: 112 EIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P  IG L  L +L+L +NR+  +P  I    +L    + +N L+ LP E+G+
Sbjct: 156 --------PVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL L  NQL  +  E  QL  L  LDL+ N L  LP EIG++  L KL L GN +
Sbjct: 208 LQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQI 267

Query: 311 RTLRSSLVNGPTPALLKYLR------------SRLPENEDSEASTTK------EDLITMA 352
            TL         PA +  L+            + LP  E  +    K        L T+ 
Sbjct: 268 TTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPR-EIGQLQNLKSLDLGGNQLTTLP 326

Query: 353 TRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             ++     KEL L G  L+ +P EIWE   +T L L  N I  LP E+    +LQ
Sbjct: 327 REINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQ 382



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 185/415 (44%), Gaps = 57/415 (13%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG--------EGDKWWEAVDLQKLILAHNNIEKLKE 62
           SL+LS   L  +PNE+   +N  E G           +  +  +LQ L L  N +  L  
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPV 157

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+  N+L+ LP  IG+L  L++L++  N +  +P EIG    L     S
Sbjct: 158 EIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL   P  +G+  NL +   + N + +LP+++    K+ KL+++GN++T L       
Sbjct: 218 ENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTL------- 270

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                      N L  +P  IG L  L  L L  NR+ ++P  I    +L    +G N L
Sbjct: 271 --------PKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQL 322

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+ KL  L  L L+ N+L     E  +L  L++L L NN +S LP EI K   L+
Sbjct: 323 TTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQ 382

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L L GN L TL   +                            E+L     R+ +   E
Sbjct: 383 ELNLRGNRLVTLPGEI----------------------GELKLLEELNLENNRIKILPNE 420

Query: 362 L---------SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +         +L G  L++IP EI     +  L L  N ++ LP ++     L+V
Sbjct: 421 IGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 475



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 167/390 (42%), Gaps = 65/390 (16%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L +L++S+N+L+ LP  IG+L  LKSLD+  N +  +P EI     L +   + N+L  +
Sbjct: 289 LQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIV 348

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +    NL+  +  NN I++LP+++     + +L++ GN+L  L    I    +L EL
Sbjct: 349 PKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGE-IGELKLLEEL 407

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N +  +P  IG+L  L   +L  N++ SIP  I    +L   Y+ NN L  LP ++
Sbjct: 408 NLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 467

Query: 250 GKLSKLGTLDLHSN---------------------------------------------- 263
            KL  L  L+L  N                                              
Sbjct: 468 EKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQPLKILSL 527

Query: 264 -----QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                Q   +  E  +L+ L  L L + SL  LP EI ++  L +L L  N L++L   +
Sbjct: 528 SLEYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEI 587

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                  LL+ LRS      D  A+   E L     RL    + L L        P EIW
Sbjct: 588 ------GLLRNLRSL-----DIGANNEFEVLPKEIARLQ-NLRSLLLNQNRFKIFPKEIW 635

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQV 407
           E  ++  L+++ N +  LP ++     LQ+
Sbjct: 636 ELKKLVILNVNTNQLDALPEKIGRLKGLQM 665



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 137/307 (44%), Gaps = 37/307 (12%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT-------------- 173
           +L  +L   LN+     S    T+LP+++     + +LD+  N+L               
Sbjct: 39  DLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLES 98

Query: 174 --------VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
                   V+  N I     L EL   KN L   P+ IG L  L  L+L  N++ ++P  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVE 158

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L +  +  N L+ LP E+G+L  L TL+L  NQL    VE  QL+ L  L LS 
Sbjct: 159 IGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSE 218

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+  P EIG++  L++L L GN L+TL         P  +  L+     N D    TT
Sbjct: 219 NQLTTFPKEIGQLENLQELDLNGNQLKTL---------PKEIGQLQKLEKLNLDGNQITT 269

Query: 345 ---KEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                 L T+   +      + LSL    L+ +P EI +   +  LDL  N +  LP E+
Sbjct: 270 LPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI 329

Query: 400 SSCASLQ 406
           +   +L+
Sbjct: 330 NKLKNLK 336



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 6/194 (3%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ + + S  P  I +L  L+SL +   S++ +P EI     L +     NQLK LP  
Sbjct: 527 LSLEYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKE 586

Query: 133 LGRCLNLSDFK-ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTEL 189
           +G   NL      +NN    LP+++A    +  L +  N+  +    +   W +  L  L
Sbjct: 587 IGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI---WELKKLVIL 643

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N L+ +PE IG L  L  LDL  NR+ ++PS I    +L E Y+  N +  LP E+
Sbjct: 644 NVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEI 703

Query: 250 GKLSKLGTLDLHSN 263
            +L  L  L L+ N
Sbjct: 704 ARLQNLRKLTLYEN 717



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 179/388 (46%), Gaps = 65/388 (16%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG-EGDKW-------WEAVDLQKLILAHNNIEKLKE 62
           SL+L    L  +P E+   KN  E    G+K        WE  +L  L L +N I  L +
Sbjct: 314 SLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPK 373

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++     L  LN+  N+L  LP  IGEL +L+ L++  N I  +P+EIG+   L  F+ S
Sbjct: 374 EIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLS 433

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLP---EDLADCSKMSKL-------------- 165
            N+L  +P  +G   NL      NN + +LP   E L D   ++ L              
Sbjct: 434 GNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQA 493

Query: 166 ----------DVEGNK------------LTVLSNNL-IASWTML-TELIASKNL------ 195
                     DVE  +            L +LS +L    +++   E++  KNL      
Sbjct: 494 LLPNCNIDLRDVEEGRTYRNLNLALEQPLKILSLSLEYQQFSLFPKEILKLKNLRSLSLY 553

Query: 196 ---LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG-NNALSALPAELGK 251
              L  +P+ I  L  L RL L  N++ S+P  I    +L    +G NN    LP E+ +
Sbjct: 554 DTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIAR 613

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L +L L+ N+ K +  E  +L +L +L+++ N L  LP +IG++  L+ L L+ N L
Sbjct: 614 LQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRL 673

Query: 311 RTLRSSL--VNGPTPALLKYLRSR-LPE 335
            TL S +  ++  T   L+Y R + LPE
Sbjct: 674 TTLPSEIGQLHNLTELYLQYNRIKTLPE 701



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 62/118 (52%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           A+N  E L +++  L  L  L ++ N+    P  I EL  L  L+V+ N +  +P++IG 
Sbjct: 600 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 659

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
              L   D S N+L  LPS +G+  NL++     N I +LPE++A    + KL +  N
Sbjct: 660 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 2/117 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L+L  N  +   +++  L  L +LNV+ N+L  LP  IG L  L+ LD+S N +  
Sbjct: 616 NLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTT 675

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +P EIG    L +     N++K LP  + R  NL       N I   P++L    K+
Sbjct: 676 LPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYENPIP--PQELDKIRKL 730



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           WE   L  L +  N ++ L E +  L  L +L++SHN+L+ LP+ IG+LH L  L + +N
Sbjct: 635 WELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYN 694

Query: 102 SIMKIPDEIGSATALVKFDCSSN 124
            I  +P+EI     L K     N
Sbjct: 695 RIKTLPEEIARLQNLRKLTLYEN 717


>gi|455791544|gb|EMF43351.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 356

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 131/243 (53%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  I +L  LKSLD++ N    +P EIG    L + +  +NQLK LP 
Sbjct: 52  VLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  +L     S N +T+ P+++     + KL+++ N+LT L    I     L +L  
Sbjct: 112 EIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQE-IGQLQSLQKLNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            KN L  +P  IG L  L  L L  N++  +P  I    +L    +G+N L+ LP E+G+
Sbjct: 171 DKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQ 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L   +N+L     E  QL +L  L LS+N L+ LP EIG++  L++L L  N L
Sbjct: 231 LQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQL 290

Query: 311 RTL 313
            TL
Sbjct: 291 TTL 293



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 148/285 (51%), Gaps = 15/285 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           +K  +   SL+L+N   + +P E+              +  +LQ+L L +N ++ L +++
Sbjct: 67  IKQLQNLKSLDLANNQFKTLPKEI-------------GQLQNLQELNLWNNQLKNLPKEI 113

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L +S N+L+  P  IG+L  L+ L++ +N +  +  EIG   +L K +   N
Sbjct: 114 GQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKN 173

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           +LK LP+ +G+  NL +   SNN +T LPE++     +  L +  N+LT+L    I    
Sbjct: 174 RLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKE-IGQLQ 232

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L +  N L  +P+ IG L +L  L L  N++ ++P  I    +L E Y+ +N L+ 
Sbjct: 233 NLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTT 292

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           LP E+G+L  L T    +NQL     E  QL+ L  L L+NN LS
Sbjct: 293 LPKEIGQLKNLQTFISFNNQLTMLPNEIGQLQNLQWLKLNNNQLS 337



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 138/270 (51%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L ++++ L  L  L++++N+   LP  IG+L  L+ L++  N + 
Sbjct: 48  LDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLK 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG   +L     S N+L   P  +G+  NL       N +T+L +++     + K
Sbjct: 108 NLPKEIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L+++ N+L  L N  I     L EL  S N L  +PE IG L  L  L L  N++  +P 
Sbjct: 168 LNLDKNRLKALPNE-IGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPK 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   Y  NN L+ LP E+G+L KL  L L  NQL     E  QL  L  L L+
Sbjct: 227 EIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLN 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +N L+ LP EIG++  L+  +   N L  L
Sbjct: 287 DNQLTTLPKEIGQLKNLQTFISFNNQLTML 316



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 94/216 (43%), Gaps = 37/216 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ I  L  L  LDL  N+  ++P  I    +L E  + NN L  LP E+G+L  L
Sbjct: 60  LTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQSL 119

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            TL L  N+L  +  E  QL+ L  L+L  N L+ L  EIG++ +L+KL L  N L+ L 
Sbjct: 120 QTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKAL- 178

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                                NE  +    +E               L L    L+ +P 
Sbjct: 179 --------------------PNEIGQLQNLQE---------------LYLSNNQLTILPE 203

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFS 410
           EI +   +  L L  N +  LP E+    +L++ +S
Sbjct: 204 EIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYS 239



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 37/196 (18%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L+L   ++ ++P  I    +L    + NN    LP E+G+L  L  L+L +NQLK    E
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L  L LS N L+  P EIG++  L+KL L  N L TL   +  G   +L     
Sbjct: 113 IGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEI--GQLQSL----- 165

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                                        ++L+L+   L A+P+EI +   + +L LS N
Sbjct: 166 -----------------------------QKLNLDKNRLKALPNEIGQLQNLQELYLSNN 196

Query: 391 SIQELPPELSSCASLQ 406
            +  LP E+    +LQ
Sbjct: 197 QLTILPEEIGQLKNLQ 212


>gi|422002227|ref|ZP_16349465.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259159|gb|EKT88538.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 433

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 147/287 (51%), Gaps = 4/287 (1%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNN--IEKLKEDLRNLPLLTVLNVSHNKLSEL 83
           N+ Y+N  EA +       +DLQ     ++N  +  L +++  L  L  L +  N+L+ +
Sbjct: 124 NDKYQNLTEALQHPTDVRVLDLQIREGENSNDPLTTLPKEIGKLQSLQELILGKNQLTTI 183

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P    +L  L+ L +SFN +  IP EI     L + D ++NQLK LP  +G   +L    
Sbjct: 184 PKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLY 243

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
            S+N IT LP+++ +   + KL +  NK+T+L    I +   L  L    N L  +P+ I
Sbjct: 244 LSSNKITILPKEIGNLQHLQKLYLSSNKITILPKE-IGNLQKLEYLYLEVNKLTTLPKEI 302

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L  L  L L  N + +IP  I    +L    + NN L+ LP E+G L  L TLDL++N
Sbjct: 303 GQLRNLKVLYLDHNNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLDLNNN 362

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L     E   L+ L  LDLS+N L+  P EIGK+  L+ L L   P
Sbjct: 363 KLTTLPQEIGNLQSLESLDLSDNPLTSFPEEIGKLQHLKWLRLENIP 409



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 132/239 (55%), Gaps = 2/239 (0%)

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
           S++ L+ LP  IG+L  L+ L +  N +  IP E      L +   S NQL  +P  + +
Sbjct: 153 SNDPLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQ 212

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             NL +  ++NN + +LP+++ +   + KL +  NK+T+L    I +   L +L  S N 
Sbjct: 213 LQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKE-IGNLQHLQKLYLSSNK 271

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           +  +P+ IG+L +L  L L  N++ ++P  I    +L   Y+ +N L+ +P E+G L  L
Sbjct: 272 ITILPKEIGNLQKLEYLYLEVNKLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGNLQNL 331

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            TLDL++N+L     E   L+ L  LDL+NN L+ LP EIG + +L  L L+ NPL + 
Sbjct: 332 QTLDLNNNKLTTLPKEIGNLQNLQTLDLNNNKLTTLPQEIGNLQSLESLDLSDNPLTSF 390



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 129/286 (45%), Gaps = 38/286 (13%)

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S++ L  LP  +G+  +L +     N +T++P++      + +L +  N+LT +    I 
Sbjct: 153 SNDPLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKE-IE 211

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L E+ ++ N L  +P+ IG+L  L +L L  N+I  +P  I     L + Y+ +N 
Sbjct: 212 QLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSNK 271

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           ++ LP E+G L KL  L L  N+L     E  QLR L VL L +N+L+ +P EIG +  L
Sbjct: 272 ITILPKEIGNLQKLEYLYLEVNKLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGNLQNL 331

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           + L L  N L TL   + N      L+ L++                             
Sbjct: 332 QTLDLNNNKLTTLPKEIGN------LQNLQT----------------------------- 356

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            L L    L+ +P EI     +  LDLS N +   P E+     L+
Sbjct: 357 -LDLNNNKLTTLPQEIGNLQSLESLDLSDNPLTSFPEEIGKLQHLK 401



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 96/206 (46%), Gaps = 11/206 (5%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           L+LS   L  +P E+   +N  E    +   + +         LQKL L+ N I  L ++
Sbjct: 196 LSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKE 255

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + NL  L  L +S NK++ LP  IG L  L+ L +  N +  +P EIG    L       
Sbjct: 256 IGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNKLTTLPKEIGQLRNLKVLYLDH 315

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N L  +P  +G   NL     +NN +T+LP+++ +   +  LD+  NKLT L    I + 
Sbjct: 316 NNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLDLNNNKLTTLPQE-IGNL 374

Query: 184 TMLTELIASKNLLNGMPETIGSLSRL 209
             L  L  S N L   PE IG L  L
Sbjct: 375 QSLESLDLSDNPLTSFPEEIGKLQHL 400



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 101/238 (42%), Gaps = 39/238 (16%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L ELI  KN L  +P+    L  L RL L  N++ +IP  I    +L E    N
Sbjct: 164 IGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNN 223

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G L  L  L L SN++     E   L+ L  L LS+N ++ LP EIG + 
Sbjct: 224 NQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQ 283

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L  L L  N L TL         P  +  LR+                           
Sbjct: 284 KLEYLYLEVNKLTTL---------PKEIGQLRNL-------------------------- 308

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
            K L L+  NL+ IP EI     +  LDL+ N +  LP E+ +  +LQ    DL  NK
Sbjct: 309 -KVLYLDHNNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQT--LDLNNNK 363



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 22/138 (15%)

Query: 277 LSVLDL-------SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           + VLDL       SN+ L+ LP EIGK+ +L++L+L  N L T+            L+YL
Sbjct: 140 VRVLDLQIREGENSNDPLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQ------LQYL 193

Query: 330 -RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
            R  L  N+ +      E L  +        +E+      L  +P EI     + KL LS
Sbjct: 194 QRLSLSFNQLTAIPKEIEQLQNL--------QEMDSNNNQLKTLPKEIGNLQHLQKLYLS 245

Query: 389 RNSIQELPPELSSCASLQ 406
            N I  LP E+ +   LQ
Sbjct: 246 SNKITILPKEIGNLQHLQ 263


>gi|418755378|ref|ZP_13311585.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964389|gb|EKO32279.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 277

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 126/241 (52%), Gaps = 4/241 (1%)

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           E L+N   + +LN+ H  L+ LP  IG L  L+ LD+    +  +P EIG    L + D 
Sbjct: 33  EALKNPMDVRILNLGHYPLTSLPQEIGTLQRLERLDLE--KLTTLPKEIGRLQNLEELDL 90

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +SNQL + P  +G    L      +N   +LP+++    K+  L++  N+LT L N  I 
Sbjct: 91  TSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNE-IG 149

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L  L  S N L  +P+ I  L  L  LDL  N++ ++P  I    +L    +G+N 
Sbjct: 150 KLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQ 209

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L  LP E+GKL KLG L+L  NQL+    E  +LR L  LDL++N L  LP EIG +  L
Sbjct: 210 LGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGTLQRL 269

Query: 301 R 301
           R
Sbjct: 270 R 270



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 107/223 (47%), Gaps = 31/223 (13%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E +DL+KL      I +L+        L  L+++ N+L++ P  IG L  LK L +  N 
Sbjct: 65  ERLDLEKLTTLPKEIGRLQN-------LEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQ 117

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
              +P EIG    L   + S+NQL  LP+ +G+  +L     SNN +TSLP+++     +
Sbjct: 118 FATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNL 177

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD+  N+                        L  +P+ IG L  L  LDL  N++ ++
Sbjct: 178 QYLDLFYNQ------------------------LGNLPKEIGKLRNLEWLDLGSNQLGNL 213

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           P  I     L E  +  N L +LP E+GKL KL  LDL SNQL
Sbjct: 214 PQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQL 256



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 123/274 (44%), Gaps = 45/274 (16%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNL  +      +TSLP+++    ++ +LD+E  KLT L    I     L EL  + N
Sbjct: 42  RILNLGHY-----PLTSLPQEIGTLQRLERLDLE--KLTTLPKE-IGRLQNLEELDLTSN 93

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L   P+ IG+L RL  L L  N+  ++P  I     L    + NN L+ LP E+GKL  
Sbjct: 94  QLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRS 153

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L L +NQL     E  +LR L  LDL  N L  LP EIGK+  L  L L  N L   
Sbjct: 154 LKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQL--- 210

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                              LP+             I    +L     EL L G  L ++P
Sbjct: 211 -----------------GNLPQE------------IGKLQKLG----ELELSGNQLRSLP 237

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            EI +  ++ KLDL+ N + +LP E+ +   L+ 
Sbjct: 238 QEIGKLRKLEKLDLTSNQLVKLPQEIGTLQRLRA 271



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 1/182 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L  N + K  +++  L  L  L++  N+ + LP  IG+L  L+ L++S N +  
Sbjct: 84  NLEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTT 143

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG   +L +   S+NQL  LP  + +  NL       N + +LP+++     +  L
Sbjct: 144 LPNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWL 203

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+L  L    I     L EL  S N L  +P+ IG L +L +LDL  N+++ +P  
Sbjct: 204 DLGSNQLGNLPQE-IGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQE 262

Query: 226 IS 227
           I 
Sbjct: 263 IG 264



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 1/163 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N    L +++  L  L  LN+S+N+L+ LP  IG+L  LK L +S N +  +
Sbjct: 108 LKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSL 167

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EI     L   D   NQL  LP  +G+  NL      +N + +LP+++    K+ +L+
Sbjct: 168 PQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQKLGELE 227

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           + GN+L  L    I     L +L  + N L  +P+ IG+L RL
Sbjct: 228 LSGNQLRSLPQE-IGKLRKLEKLDLTSNQLVKLPQEIGTLQRL 269


>gi|148233354|ref|NP_001086369.1| leucine rich repeat containing 1 [Xenopus laevis]
 gi|49523200|gb|AAH75175.1| Scrp1 protein [Xenopus laevis]
 gi|83642783|dbj|BAE54373.1| scribble-related protein 1 [Xenopus laevis]
          Length = 524

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 189/409 (46%), Gaps = 51/409 (12%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILAH 54
           +  R   S++  +RSL  VP E+Y+      E             ++++ V L+KL L+ 
Sbjct: 9   RCNRHVESVDKRHRSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVKLRKLGLSD 68

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I++L  ++ N   L  L+VS N++ E+P +I     L+  D S N + ++PD      
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPDSFPDLA 128

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L     +   L+ LP ++G   NL   +   N +T LPE LA   ++ +LDV  N+L  
Sbjct: 129 SLTCLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYN 188

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I S   L +L    N L  +P  IG+L  L+ LDL +N++  +P  ISG  SL +
Sbjct: 189 LPET-IGSLYKLKDLWLDGNQLADLPPEIGNLKNLLCLDLSENKLERLPEEISGLKSLTD 247

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPP 292
             + +N++  LP  +GKL  L  L +  N+L +   C+  C+  L+ L L+ N L  LP 
Sbjct: 248 LLVSHNSIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECE-SLTELILTENQLLVLPR 306

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            IGK+  L  L +  N L +L                               KE  I   
Sbjct: 307 SIGKLKKLCNLNIDRNKLMSL------------------------------PKE--IGGC 334

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             L+V      +    LS IPSEI +A E+   D++ N +  LP  L+S
Sbjct: 335 CSLNV----FCVRENRLSRIPSEIAQATELHVFDVAGNRLTHLPLSLTS 379



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 133/241 (55%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L+V +N+L  LP  IG L+ LK L +  N +  
Sbjct: 152 NLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYNLPETIGSLYKLKDLWLDGNQLAD 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S+N I  LP+ +     +S L
Sbjct: 212 LPPEIGNLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSIEVLPDGIGKLKNLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+L  L++  I     LTELI ++N L  +P +IG L +L  L++ +N+++S+P  
Sbjct: 272 KVDQNRLMQLTD-CIGECESLTELILTENQLLVLPRSIGKLKKLCNLNIDRNKLMSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F +  N LS +P+E+ + ++L   D+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLNVFCVRENRLSRIPSEIAQATELHVFDVAGNRLTHLPLSLTSLKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 158/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N++ E+P S+  C 
Sbjct: 46  NQLRELPKQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LP+   D + ++ L +    L VL                    
Sbjct: 106 ALQVADF--SGNPLTRLPDSFPDLASLTCLSINDISLQVL-------------------- 143

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
               PE IG+LS L+ L+L +N +  +P S++    L E  +GNN L  LP  +G L KL
Sbjct: 144 ----PENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYNLPETIGSLYKL 199

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L  NQL +   E   L+ L  LDLS N L  LP EI  + +L  LL++ N +  L 
Sbjct: 200 KDLWLDGNQLADLPPEIGNLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSIEVLP 259

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +      ++LK  ++RL +  D                 S+T  EL L    L  +P 
Sbjct: 260 DGIGKLKNLSILKVDQNRLMQLTDCIGECE-----------SLT--ELILTENQLLVLPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            I +  ++  L++ RN +  LP E+  C SL V
Sbjct: 307 SIGKLKKLCNLNIDRNKLMSLPKEIGGCCSLNV 339



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 123/314 (39%), Gaps = 83/314 (26%)

Query: 93  LKSLDVSFNSIMKIPDEIGSAT-ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++S+D    S++ +P+EI   + +L +    +NQL+ELP    + + L     S+N I  
Sbjct: 14  VESVDKRHRSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVKLRKLGLSDNEIQR 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP +                        IA++  L EL  S+N +  +PE+I     L  
Sbjct: 74  LPPE------------------------IANFMQLVELDVSRNEIPEIPESISFCKALQV 109

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D   N +  +P S     SL    + + +L  LP  +G LS L +L+L  N L      
Sbjct: 110 ADFSGNPLTRLPDSFPDLASLTCLSINDISLQVLPENIGNLSNLVSLELRENLL------ 163

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                           + LP  + ++  L +L +  N L  L                  
Sbjct: 164 ----------------TFLPESLAQLHRLEELDVGNNELYNL------------------ 189

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
             PE              T+ +   +  K+L L+G  L+ +P EI     +  LDLS N 
Sbjct: 190 --PE--------------TIGSLYKL--KDLWLDGNQLADLPPEIGNLKNLLCLDLSENK 231

Query: 392 IQELPPELSSCASL 405
           ++ LP E+S   SL
Sbjct: 232 LERLPEEISGLKSL 245


>gi|421088203|ref|ZP_15549031.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003188|gb|EKO53634.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 401

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 165/356 (46%), Gaps = 38/356 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L +++  L  L VL +++N+L+ LP  IG+L  L+ L +S N + 
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P EIG    L     S N+L  LP  +G+  NL +   + N  T+ P+++     + +
Sbjct: 106 TFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQ 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+L  L N  I     L EL  S N L  +   IG L  L  LDL+ N++ ++P 
Sbjct: 166 LNLYANQLKTLPNE-IGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    + NN    +P E+G+L  L  LDL  NQ K    E  QL+ L +L L+
Sbjct: 225 EIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLN 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN    +P E G++  L+ L L  N L TL + +        LK LR             
Sbjct: 285 NNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQ------LKNLR------------- 325

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                            EL L    L  + +EI +   + KL L  N ++ LP E+
Sbjct: 326 -----------------ELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEI 364



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 162/336 (48%), Gaps = 38/336 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG+L  L+ L+++ N +  +P EIG    L +   S NQL   P 
Sbjct: 50  VLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     S N +T+LP+++     + +L +  N+ T                  
Sbjct: 110 EIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFT------------------ 151

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L +L+L+ N++ ++P+ I    +L E ++  N L  L AE+G+
Sbjct: 152 ------AFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQ 205

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDL+ NQLK    E  QL+ L +LDL+NN    +P EIG++  L+ L L  N  
Sbjct: 206 LQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQF 265

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +T+   +        LK L+     N  ++  T  E+   +        + LSL    L+
Sbjct: 266 KTVPEEI------GQLKNLQMLFLNN--NQFKTVPEETGQLK-----NLQMLSLNANQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P+EI +   + +L LS N ++ L  E+    +L+
Sbjct: 313 TLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLK 348



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 136/306 (44%), Gaps = 38/306 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+N  L  +P E+              +  +LQ+L L+ N +    +++  L  L  L
Sbjct: 74  LELNNNQLATLPKEI-------------GQLQNLQELHLSGNQLTTFPKEIGQLKNLQTL 120

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +S N+L+ LP  IG+L  L+ L ++ N     P EIG    L + +  +NQLK LP+ +
Sbjct: 121 VLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEI 180

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL +   S N + +L  ++     +  LD+  N+L  L    I     L  L  + 
Sbjct: 181 GQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKE-IGQLKNLQMLDLNN 239

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N    +PE IG L  L  LDL  N+  ++P  I    +L   ++ NN    +P E G+L 
Sbjct: 240 NQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLK 299

Query: 254 KLGTLDLHSNQL-----------------------KEYCVEACQLR-LSVLDLSNNSLSG 289
            L  L L++NQL                       K    E  QL+ L  L L +N L  
Sbjct: 300 NLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKT 359

Query: 290 LPPEIG 295
           LP EIG
Sbjct: 360 LPKEIG 365



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 128/290 (44%), Gaps = 38/290 (13%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S  +LK LP  +G+  NL   + +NN + +LP+++     + +L + GN+LT     
Sbjct: 51  LDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKE 110

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I     L  L+ SKN L  +P+ IG L  L  L L+ N+  + P  I    +L +  + 
Sbjct: 111 -IGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLY 169

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
            N L  LP E+G+L  L  L L  NQLK    E  QL+ L VLDL++N L  LP EIG++
Sbjct: 170 ANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQL 229

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L L  N  +T+                    PE             I     L V
Sbjct: 230 KNLQMLDLNNNQFKTV--------------------PEE------------IGQLKNLQV 257

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
               L L       +P EI +   +  L L+ N  + +P E     +LQ+
Sbjct: 258 ----LDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQM 303



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 14/214 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL    L+ +PNE+              +  +L++L L++N ++ L  ++  L  L V
Sbjct: 165 QLNLYANQLKTLPNEI-------------GQLQNLRELHLSYNQLKTLSAEIGQLQNLQV 211

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+L  LP  IG+L  L+ LD++ N    +P+EIG    L   D   NQ K +P  
Sbjct: 212 LDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEE 271

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     +NN   ++PE+      +  L +  N+LT L N  I     L EL  S
Sbjct: 272 IGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNE-IRQLKNLRELHLS 330

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
            N L  +   IG L  L +L L  N++ ++P  I
Sbjct: 331 YNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEI 364


>gi|158259127|dbj|BAF85522.1| unnamed protein product [Homo sapiens]
          Length = 582

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 195/398 (48%), Gaps = 56/398 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           +EL L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QELVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L+ +P  I     +T L L  N +  LP E+ +  +L+
Sbjct: 483 LTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLE 520



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L EL+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQELVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            +++L +L L  N L  +  SL 
Sbjct: 282 NLSSLSRLGLRYNRLSAIPRSLA 304



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L +   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQELVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 199

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   ++LS+    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSKLSM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ +C   Q+   DL  N+
Sbjct: 247 HNQLEHLPKEIGNCT--QITNLDLQHNE 272


>gi|421110784|ref|ZP_15571275.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803881|gb|EKS10008.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 371

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 138/261 (52%), Gaps = 2/261 (0%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L +++ NL  L  L++S N ++ LP  IG L  L+ L++  N +  +P EIG   +L + 
Sbjct: 52  LPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQSLQDLNLWENELTTLPKEIGKLQSLQRL 111

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
               NQL  LP  +G+  +L +     N +T++P++      + +L +  N+LT +    
Sbjct: 112 TLWENQLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKE- 170

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L E+ ++ N L  +P+ IG+L  L +L L  N+I  +P  I     L + Y+ +
Sbjct: 171 IEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSS 230

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N ++ LP E+G L KL  L L  NQL     E  QLR L VL L +N+L+ +P EIGK+ 
Sbjct: 231 NKITILPKEIGNLQKLEYLYLEVNQLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGKLQ 290

Query: 299 TLRKLLLTGNPLRTLRSSLVN 319
            L+ L L  N L TL   + N
Sbjct: 291 NLQTLSLDRNKLTTLPKEIEN 311



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 146/287 (50%), Gaps = 25/287 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQKL L+ N I  L +++ NL  L  LN+  N+L+ LP  IG+L  L+ L +  N +  +
Sbjct: 62  LQKLDLSFNTITVLPQEIGNLQSLQDLNLWENELTTLPKEIGKLQSLQRLTLWENQLTTL 121

Query: 107 PDEIGSATA-----------------------LVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P EIG   +                       L +   S NQL  +P  + +  NL +  
Sbjct: 122 PKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMD 181

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
           ++NN + +LP+++ +   + KL +  NK+T+L    I +   L +L  S N +  +P+ I
Sbjct: 182 SNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKE-IGNLQHLQKLYLSSNKITILPKEI 240

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G+L +L  L L  N++ ++P  I    +L   Y+ +N L+ +P E+GKL  L TL L  N
Sbjct: 241 GNLQKLEYLYLEVNQLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGKLQNLQTLSLDRN 300

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L     E   L+ L  LDLSNN L+  P EIGK+  L+ L L   P
Sbjct: 301 KLTTLPKEIENLQSLESLDLSNNPLTSFPEEIGKLQHLKWLRLENIP 347



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 161/354 (45%), Gaps = 42/354 (11%)

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
           +   L E L+N   + VL+++  KL+ LP  IG L  L+ LD+SFN+I  +P EIG+  +
Sbjct: 25  DFHTLNEALQNPTQVRVLHLNAKKLTALPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQS 84

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L   +   N+L  LP  +G+  +L       N +T+LP+++     + +L +  N+LT +
Sbjct: 85  LQDLNLWENELTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGKLQSLQELILGKNQLTTI 144

Query: 176 SNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
                  W +  L  L  S N L  +P+ I  L  L  +D + N++ ++P  I     L 
Sbjct: 145 PKEF---WQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQ 201

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP 292
           + Y+ +N ++ LP E+G L  L  L L SN++     E   L +L  L L  N L+ LP 
Sbjct: 202 KLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNQLTTLPK 261

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EIG++  L+ L L  N L                              A+  KE  I   
Sbjct: 262 EIGQLRNLKVLYLDHNNL------------------------------ANIPKE--IGKL 289

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             L      LSL+   L+ +P EI     +  LDLS N +   P E+     L+
Sbjct: 290 QNLQT----LSLDRNKLTTLPKEIENLQSLESLDLSNNPLTSFPEEIGKLQHLK 339



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 38/264 (14%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T+LP+++ +   + KLD+  N +TVL    I +   L +L   +N L  +P+ IG L  
Sbjct: 49  LTALPKEIGNLQHLQKLDLSFNTITVLPQE-IGNLQSLQDLNLWENELTTLPKEIGKLQS 107

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RL L +N++ ++P  I    SL E  +G N L+ +P E  +L  L  L L  NQL   
Sbjct: 108 LQRLTLWENQLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAI 167

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL+ L  +D +NN L  LP EIG +  L+KL L+ N +  L   + N      L+
Sbjct: 168 PKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIGN------LQ 221

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
           +L+                              +L L    ++ +P EI    ++  L L
Sbjct: 222 HLQ------------------------------KLYLSSNKITILPKEIGNLQKLEYLYL 251

Query: 388 SRNSIQELPPELSSCASLQVKFSD 411
             N +  LP E+    +L+V + D
Sbjct: 252 EVNQLTTLPKEIGQLRNLKVLYLD 275



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 118/269 (43%), Gaps = 38/269 (14%)

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           +K       +L E L + +++  L +   KLT L    I +   L +L  S N +  +P+
Sbjct: 19  YKLDAEDFHTLNEALQNPTQVRVLHLNAKKLTALPKE-IGNLQHLQKLDLSFNTITVLPQ 77

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG+L  L  L+L +N + ++P  I    SL    +  N L+ LP E+GKL  L  L L 
Sbjct: 78  EIGNLQSLQDLNLWENELTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGKLQSLQELILG 137

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            NQL     E  QL+ L  L LS N L+ +P EI ++  L+++    N L+TL   + N 
Sbjct: 138 KNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGN- 196

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                L++L+                              +L L    ++ +P EI    
Sbjct: 197 -----LQHLQ------------------------------KLYLSSNKITILPKEIGNLQ 221

Query: 381 EITKLDLSRNSIQELPPELSSCASLQVKF 409
            + KL LS N I  LP E+ +   L+  +
Sbjct: 222 HLQKLYLSSNKITILPKEIGNLQKLEYLY 250


>gi|418721889|ref|ZP_13281061.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410741686|gb|EKQ90441.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 351

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 140/273 (51%), Gaps = 2/273 (0%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W+  +L++L L +N +  L +++  L  L +L++  N+L+ LP  IG+L  L+ LD++ N
Sbjct: 41  WQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQLTILPKEIGQLKNLEYLDLNNN 100

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P EIG    L      +NQL  LP  + +  NL D   S N  T LP+++     
Sbjct: 101 QLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFTILPKEIGRLQN 160

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L +  N+L  L    I     L ELI   + L  +P+ IG L  L  L L  N++  
Sbjct: 161 LGSLIMRHNQLKTLPKE-IGQLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLRNNQLTI 219

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P  I    +L      NN L+ LP E+G L  L TLDL +NQLK    E  QL+ L  L
Sbjct: 220 LPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKEVGQLKNLREL 279

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            LS N L  LP E+G++  LR L L  N L TL
Sbjct: 280 YLSANQLKTLPKEVGQLKNLRDLSLDNNQLETL 312



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 131/265 (49%), Gaps = 23/265 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +N +  L +++  L  L +L++  N+L+ LP  I +L  L+ LD+S NS   
Sbjct: 91  NLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFTI 150

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       NQLK LP  +G+  NL +    ++ + +LP+++     +  L
Sbjct: 151 LPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKNLGELILEHSQLKTLPKEIGQLKDLQHL 210

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT+L   +     +LT L +  N L  +P+ IG L  L+ LDL  N++ ++P  
Sbjct: 211 SLRNNQLTILPKEIEQLKNLLT-LSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKE 269

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           +    +L E Y+  N L  LP E+G+L  L                        L L NN
Sbjct: 270 VGQLKNLRELYLSANQLKTLPKEVGQLKNLRD----------------------LSLDNN 307

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPL 310
            L  LP E+G++  LR L L  NP+
Sbjct: 308 QLETLPKEVGQLKNLRWLFLDANPI 332



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 153/343 (44%), Gaps = 42/343 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++   KL+ LP  I +L  L+ L +  N +  +P EIG    L      +NQL  LP 
Sbjct: 25  VLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQLTILPK 84

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTEL 189
            +G+  NL     +NN +T+LP+++     +  L +  N+LTVL   +   W +  L +L
Sbjct: 85  EIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEI---WQLKNLEDL 141

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N    +P+ IG L  L  L +  N++ ++P  I    +L E  + ++ L  LP E+
Sbjct: 142 DLSGNSFTILPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKNLGELILEHSQLKTLPKEI 201

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L  L L +NQL     E  QL+ L  L   NN L+ LP EIG +  L  L L  N
Sbjct: 202 GQLKDLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNN 261

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L+TL   +        LK LR                              EL L    
Sbjct: 262 QLKTLPKEV------GQLKNLR------------------------------ELYLSANQ 285

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           L  +P E+ +   +  L L  N ++ LP E+    +L+  F D
Sbjct: 286 LKTLPKEVGQLKNLRDLSLDNNQLETLPKEVGQLKNLRWLFLD 328



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 134/303 (44%), Gaps = 39/303 (12%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ + S    K L  +L   L++         +T LP+++     + +L ++ N+LT L 
Sbjct: 1   MQAEQSGTYYKALTKALQNPLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTL- 59

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
                                  P+ IG L  L  L L+ N++  +P  I    +L    
Sbjct: 60  -----------------------PKEIGLLQNLKILHLYANQLTILPKEIGQLKNLEYLD 96

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           + NN L+ LP E+G L  L  L L++NQL     E  QL+ L  LDLS NS + LP EIG
Sbjct: 97  LNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFTILPKEIG 156

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPAL---------LKYLRSRLPENEDSEASTTKE 346
           ++  L  L++  N L+TL   +  G    L         LK L   + + +D +  + + 
Sbjct: 157 RLQNLGSLIMRHNQLKTLPKEI--GQLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLRN 214

Query: 347 DLITMATRLSVTSKE---LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
           + +T+  +     K    LS +   L+ +P EI     +  LDL  N ++ LP E+    
Sbjct: 215 NQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKEVGQLK 274

Query: 404 SLQ 406
           +L+
Sbjct: 275 NLR 277



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 13/159 (8%)

Query: 12  GSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLT 71
           G L L +  L+ +P E+              +  DLQ L L +N +  L +++  L  L 
Sbjct: 185 GELILEHSQLKTLPKEI-------------GQLKDLQHLSLRNNQLTILPKEIEQLKNLL 231

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L+  +N+L+ LP  IG L  L +LD+  N +  +P E+G    L +   S+NQLK LP 
Sbjct: 232 TLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKEVGQLKNLRELYLSANQLKTLPK 291

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
            +G+  NL D    NN + +LP+++     +  L ++ N
Sbjct: 292 EVGQLKNLRDLSLDNNQLETLPKEVGQLKNLRWLFLDAN 330



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 17/166 (10%)

Query: 12  GSLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           GSL + +  L+ +P E+   KN  E               LIL H+ ++ L +++  L  
Sbjct: 162 GSLIMRHNQLKTLPKEIGQLKNLGE---------------LILEHSQLKTLPKEIGQLKD 206

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++ +N+L+ LP  I +L  L +L    N +  +P EIG    LV  D  +NQLK L
Sbjct: 207 LQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTL 266

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           P  +G+  NL +   S N + +LP+++     +  L ++ N+L  L
Sbjct: 267 PKEVGQLKNLRELYLSANQLKTLPKEVGQLKNLRDLSLDNNQLETL 312


>gi|340375357|ref|XP_003386202.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Amphimedon
           queenslandica]
          Length = 635

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 189/407 (46%), Gaps = 34/407 (8%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK   +   L+L +  LR+VP  V              E   LQ L L  N I  +   +
Sbjct: 218 LKQCVSLSVLDLRHNKLREVPPVV-------------CELASLQTLYLRFNKIVSVNPAI 264

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
            NL  LT L +  NK+ +LP+ IG L  L +LDVS N +  +PDEI + + L       N
Sbjct: 265 GNLRNLTSLILRENKIRDLPSTIGSLTRLTALDVSHNHLESLPDEIANCSQLSFLQLQHN 324

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
            L ELP ++G   +L       N ++ LP  L  C++++++ +E N LT L + L  S T
Sbjct: 325 DLTELPVAIGNLKSLKRLGLQYNQLSELPPSLCSCTELNEIGLESNTLTSLPDQLFGSVT 384

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLD---LHQNRILSIPSSI-SGCCSLAEFYMGNN 240
            ++ +  S+N     P  I   S L+ ++   +  N I  +P  I S    L +  + +N
Sbjct: 385 KMSNIQLSRNSFTSFP--ISDPSHLVSVNSLMIEHNHITKVPLGIFSQATELTQLSLRDN 442

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            ++ LP + G    L  L+L +NQL     E  +L RL +L L+NN++  LP  I  +  
Sbjct: 443 QITTLPLDFGTWVTLTELNLGTNQLSSIPEEIQELTRLEILVLANNTIRTLPKGISALRN 502

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L++L L GN L  L +          + YLR     N  S   T     +     L V  
Sbjct: 503 LKELDLEGNKLEYLATE---------ISYLRELTKLNVQSNRITN----LPRGLGLLVNL 549

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASL 405
           K LS    NL  IP+EI     + +L L+ N ++Q LP EL+ C  L
Sbjct: 550 KHLSAGENNLLEIPAEIGTLENLEELYLNDNPNLQFLPYELALCKRL 596



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 180/366 (49%), Gaps = 31/366 (8%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S + ++ LP  I E+  ++ L +  N +  +P E+G+   L K   + N L +LP+
Sbjct: 157 ILDLSKSDIAVLPGNIKEVSFIEELYLYGNRVSTLPPEVGNLKKLRKLALNENMLTDLPN 216

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            L +C++LS     +N +  +P  + + + +  L +  NK+ V  N  I +   LT LI 
Sbjct: 217 ELKQCVSLSVLDLRHNKLREVPPVVCELASLQTLYLRFNKI-VSVNPAIGNLRNLTSLIL 275

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +N +  +P TIGSL+RL  LD+  N + S+P  I+ C  L+   + +N L+ LP  +G 
Sbjct: 276 RENKIRDLPSTIGSLTRLTALDVSHNHLESLPDEIANCSQLSFLQLQHNDLTELPVAIGN 335

Query: 252 LSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTGNP 309
           L  L  L L  NQL E     C    L+ + L +N+L+ LP ++ G +T +  + L+ N 
Sbjct: 336 LKSLKRLGLQYNQLSELPPSLCSCTELNEIGLESNTLTSLPDQLFGSVTKMSNIQLSRNS 395

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS------------- 356
             +   S      P+ L  + S + E+  +  +     + + AT L+             
Sbjct: 396 FTSFPIS-----DPSHLVSVNSLMIEH--NHITKVPLGIFSQATELTQLSLRDNQITTLP 448

Query: 357 ------VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFS 410
                 VT  EL+L    LS+IP EI E   +  L L+ N+I+ LP  +S+  +L  K  
Sbjct: 449 LDFGTWVTLTELNLGTNQLSSIPEEIQELTRLEILVLANNTIRTLPKGISALRNL--KEL 506

Query: 411 DLVTNK 416
           DL  NK
Sbjct: 507 DLEGNK 512



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 25/214 (11%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           I LDL ++ I  +P +I     + E Y+  N +S LP E+G L KL  L L+ N L +  
Sbjct: 156 IILDLSKSDIAVLPGNIKEVSFIEELYLYGNRVSTLPPEVGNLKKLRKLALNENMLTDLP 215

Query: 270 VEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
            E  Q + LSVLDL +N L  +PP + ++ +L+ L L  N + ++  ++ N      L+ 
Sbjct: 216 NELKQCVSLSVLDLRHNKLREVPPVVCELASLQTLYLRFNKIVSVNPAIGN------LRN 269

Query: 329 LRSR-LPENEDSEASTTKEDLITMATRLSVTSKE----------------LSLEGMNLSA 371
           L S  L EN+  +  +T   L T  T L V+                   L L+  +L+ 
Sbjct: 270 LTSLILRENKIRDLPSTIGSL-TRLTALDVSHNHLESLPDEIANCSQLSFLQLQHNDLTE 328

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +P  I     + +L L  N + ELPP L SC  L
Sbjct: 329 LPVAIGNLKSLKRLGLQYNQLSELPPSLCSCTEL 362



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 14/168 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L  +P E+              E   L+ L+LA+N I  L + +  L  L  L
Sbjct: 460 LNLGTNQLSSIPEEI-------------QELTRLEILVLANNTIRTLPKGISALRNLKEL 506

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NKL  L   I  L  L  L+V  N I  +P  +G    L       N L E+P+ +
Sbjct: 507 DLEGNKLEYLATEISYLRELTKLNVQSNRITNLPRGLGLLVNLKHLSAGENNLLEIPAEI 566

Query: 134 GRCLNLSDFKASNNC-ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
           G   NL +   ++N  +  LP +LA C +++ + VEG  L+ L  +++
Sbjct: 567 GTLENLEELYLNDNPNLQFLPYELALCKRLALMSVEGCPLSRLPPHVV 614


>gi|398341375|ref|ZP_10526078.1| hypothetical protein LkirsB1_19650 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 374

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 150/301 (49%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS    + +P E+ K               +LQ+L L  N +  L +++  L  L  L
Sbjct: 49  LNLSANRFKTLPKEIGK-------------LKNLQELNLNKNQLTILPKEIGQLKNLRKL 95

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+ + LP  + +L  LK L +  N +  +P+EIG    L     + NQ K +P  +
Sbjct: 96  NLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEI 155

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL      NN +T+LP ++     +  LD+  N+LT L N  I     L +L  S 
Sbjct: 156 GQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNE-IGQLQKLQDLYLST 214

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L L  N++  +P+ I    +L   Y+ +N L+ L  ++ +L 
Sbjct: 215 NRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQ 274

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L +LDL +NQL  +  E  QL+ L VLDL +N L+ LP EI ++  L+ L L  N L T
Sbjct: 275 NLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTT 334

Query: 313 L 313
           L
Sbjct: 335 L 335



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 145/270 (53%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++  N   
Sbjct: 44  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFT 103

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+     L +    SN+L  LP+ +G+  NL   K ++N   ++P+++     +  
Sbjct: 104 ILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQT 163

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+LT L N  I     L  L    N L  +P  IG L +L  L L  NR+ ++P+
Sbjct: 164 LNLGNNQLTALPNE-IGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPN 222

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L + Y+G+N L+ LP E+G+L  L TL L SN+L     +  QL+ L  LDL 
Sbjct: 223 EIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLW 282

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           NN L+  P EI ++  L+ L L  N L TL
Sbjct: 283 NNQLTTFPKEIEQLKNLQVLDLGSNQLTTL 312



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 145/308 (47%), Gaps = 36/308 (11%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNL+   L  +P E+   KN  +    D  +  +        +L++L L  N +  L  +
Sbjct: 72  LNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNE 131

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL ++HN+   +P  IG+L  L++L++  N +  +P+EIG    L   D  S
Sbjct: 132 IGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGS 191

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP+ +G+   L D   S N +T+LP ++     +  L +  N+LT+L        
Sbjct: 192 NRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTIL-------- 243

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  IG L  L  L L  NR+ ++   I    +L    + NN L+
Sbjct: 244 ----------------PNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLT 287

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
             P E+ +L  L  LDL SNQL     E  QL+ L VLDL +N L+ LP  IG++  L+ 
Sbjct: 288 TFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTTLPEGIGQLQNLQ- 346

Query: 303 LLLTGNPL 310
           L L  N L
Sbjct: 347 LYLNNNQL 354



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 147/327 (44%), Gaps = 38/327 (11%)

Query: 82  ELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
           +L  AI     ++ L++S N    +P EIG    L + + + NQL  LP  +G+  NL  
Sbjct: 35  DLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRK 94

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
               +N  T LP+++     + +L +  N+LT L                        P 
Sbjct: 95  LNLHDNQFTILPKEVEKLENLKELSLGSNRLTTL------------------------PN 130

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N+  +IP  I    +L    +GNN L+ALP E+G+L  L +LDL 
Sbjct: 131 EIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLG 190

Query: 262 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
           SN+L     E  QL +L  L LS N L+ LP EIG++  L+ L L  N L  L + +   
Sbjct: 191 SNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQL 250

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                L YLRS       +  +T  +D+  +        K L L    L+  P EI +  
Sbjct: 251 KNLQTL-YLRS-------NRLTTLSKDIEQLQNL-----KSLDLWNNQLTTFPKEIEQLK 297

Query: 381 EITKLDLSRNSIQELPPELSSCASLQV 407
            +  LDL  N +  LP E+    +LQV
Sbjct: 298 NLQVLDLGSNQLTTLPEEIEQLKNLQV 324



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 134/286 (46%), Gaps = 34/286 (11%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEG--------DKWWEAVDLQKLILAHNNIEKLKE 62
            LNL +     +P EV K  N  E   G        ++  +  +L+ L L HN  + + +
Sbjct: 94  KLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPK 153

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+ +N+L+ LP  IG+L  LKSLD+  N +  +P+EIG    L     S
Sbjct: 154 EIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLS 213

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N+L  LP+ +G+  NL D    +N +T LP ++     +  L +  N+LT LS +    
Sbjct: 214 TNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKD---- 269

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                               I  L  L  LDL  N++ + P  I    +L    +G+N L
Sbjct: 270 --------------------IEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQL 309

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 288
           + LP E+ +L  L  LDL SNQL        QL+   L L+NN LS
Sbjct: 310 TTLPEEIEQLKNLQVLDLGSNQLTTLPEGIGQLQNLQLYLNNNQLS 355



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 103/232 (44%), Gaps = 38/232 (16%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL N  L  +PNE+ +                                 L+N   L  
Sbjct: 163 TLNLGNNQLTALPNEIGQ---------------------------------LQN---LKS 186

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+ LP  IG+L  L+ L +S N +  +P+EIG    L      SNQL  LP+ 
Sbjct: 187 LDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNE 246

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL      +N +T+L +D+     +  LD+  N+LT      I     L  L   
Sbjct: 247 IGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKE-IEQLKNLQVLDLG 305

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            N L  +PE I  L  L  LDL  N++ ++P  I    +L + Y+ NN LS+
Sbjct: 306 SNQLTTLPEEIEQLKNLQVLDLGSNQLTTLPEGIGQLQNL-QLYLNNNQLSS 356


>gi|353230339|emb|CCD76510.1| cell polarity protein [Schistosoma mansoni]
          Length = 1450

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 153/275 (55%), Gaps = 8/275 (2%)

Query: 47  LQKLILAHNNIEKLKE---DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           LQ L +++N ++ L      LRNL +L + ++S   ++ELP  IG L +L+ L++  N +
Sbjct: 110 LQSLDVSNNPLQSLPAGFCQLRNLRVLCLNDIS---IAELPEEIGSLQLLEKLELRDNCL 166

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             IPD       L   D  +N+ +EL   +G+   LS+    +N + SLP++L +   + 
Sbjct: 167 KSIPDSFADLIHLEFLDLGANEFQELSPVIGQLSQLSELWIDDNELRSLPKELGNLGNLQ 226

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +LD+  N ++ L  + I+    L++L  S+N +  +P  +G L +LI L L+QNR+L++ 
Sbjct: 227 QLDLSENLISTLPES-ISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRLLTVT 285

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDL 282
            +I  C SL E Y+  N LS LP+ +G L  +  L++  NQL E   E  Q   L++L L
Sbjct: 286 PTIGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNVDQNQLTELPSEIGQCTSLNILSL 345

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
             N+L  LP EIG  T LR L ++GN L  L  SL
Sbjct: 346 RENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFSL 380



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 197/425 (46%), Gaps = 73/425 (17%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I    R +  ++  +  L  VP++V +NF              L++  L  N I++L ++
Sbjct: 8   IGPCGRHTDHIDRRHSKLEQVPDDVIRNFRT------------LEECRLDANQIKELPKN 55

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM--KIPDEIGSATALVKFDC 121
              L  + +L +S N+L+ LP  IG    L  LD+S N ++  ++P  I    +L   D 
Sbjct: 56  SLRLTRIRLLTLSDNELTRLPTGIGSFSNLVELDISRNGMISAELPASIRFCDSLQSLDV 115

Query: 122 SSNQLKELPSSLGR-------CLN----------------LSDFKASNNCITSLPEDLAD 158
           S+N L+ LP+   +       CLN                L   +  +NC+ S+P+  AD
Sbjct: 116 SNNPLQSLPAGFCQLRNLRVLCLNDISIAELPEEIGSLQLLEKLELRDNCLKSIPDSFAD 175

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              +  LD+  N+   LS  +I   + L+EL    N L  +P+ +G+L  L +LDL +N 
Sbjct: 176 LIHLEFLDLGANEFQELS-PVIGQLSQLSELWIDDNELRSLPKELGNLGNLQQLDLSENL 234

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 278
           I ++P SISG  SL++  +  N+++ LP  LG L KL  L L+ N+L           L+
Sbjct: 235 ISTLPESISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRL-----------LT 283

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
           V            P IG  ++L++L LT N L  L SS+ N     L+      + +N+ 
Sbjct: 284 VT-----------PTIGNCSSLQELYLTENFLSKLPSSIGN-----LVSMFHLNVDQNQL 327

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
           +E  +     I   T L++    LSL   NL  +P EI     +  LD+S N +  LP  
Sbjct: 328 TELPSE----IGQCTSLNI----LSLRENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFS 379

Query: 399 LSSCA 403
           LS C+
Sbjct: 380 LSRCS 384



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 124/239 (51%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L  N ++ + +   +L  L  L++  N+  EL   IG+L  L  L +  N +  +
Sbjct: 156 LEKLELRDNCLKSIPDSFADLIHLEFLDLGANEFQELSPVIGQLSQLSELWIDDNELRSL 215

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G+   L + D S N +  LP S+   ++LSD   S N IT LP  L D  K+  L 
Sbjct: 216 PKELGNLGNLQQLDLSENLISTLPESISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILK 275

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L  ++   I + + L EL  ++N L+ +P +IG+L  +  L++ QN++  +PS I
Sbjct: 276 LNQNRLLTVTPT-IGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNVDQNQLTELPSEI 334

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C SL    +  N L  LP E+G  ++L  LD+  N+L        +  L+ L LS N
Sbjct: 335 GQCTSLNILSLRENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFSLSRCSLTALWLSQN 393



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 2/150 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L  L L+ N+I  L   L +L  L +L ++ N+L  +   IG    L+ L ++ N + 
Sbjct: 246 VSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRLLTVTPTIGNCSSLQELYLTENFLS 305

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           K+P  IG+  ++   +   NQL ELPS +G+C +L+      N +  LP+++ +C+++  
Sbjct: 306 KLPSSIGNLVSMFHLNVDQNQLTELPSEIGQCTSLNILSLRENNLHRLPDEIGNCTRLRV 365

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           LDV GN+L  L  +L  S   LT L  S+N
Sbjct: 366 LDVSGNRLDRLPFSL--SRCSLTALWLSQN 393


>gi|256090463|ref|XP_002581209.1| cell polarity protein; leucine-rich repeat protein; scribble
           complex protein [Schistosoma mansoni]
          Length = 1456

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 153/275 (55%), Gaps = 8/275 (2%)

Query: 47  LQKLILAHNNIEKLKE---DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           LQ L +++N ++ L      LRNL +L + ++S   ++ELP  IG L +L+ L++  N +
Sbjct: 116 LQSLDVSNNPLQSLPAGFCQLRNLRVLCLNDIS---IAELPEEIGSLQLLEKLELRDNCL 172

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             IPD       L   D  +N+ +EL   +G+   LS+    +N + SLP++L +   + 
Sbjct: 173 KSIPDSFADLIHLEFLDLGANEFQELSPVIGQLSQLSELWIDDNELRSLPKELGNLGNLQ 232

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +LD+  N ++ L  + I+    L++L  S+N +  +P  +G L +LI L L+QNR+L++ 
Sbjct: 233 QLDLSENLISTLPES-ISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRLLTVT 291

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDL 282
            +I  C SL E Y+  N LS LP+ +G L  +  L++  NQL E   E  Q   L++L L
Sbjct: 292 PTIGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNVDQNQLTELPSEIGQCTSLNILSL 351

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
             N+L  LP EIG  T LR L ++GN L  L  SL
Sbjct: 352 RENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFSL 386



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 195/431 (45%), Gaps = 79/431 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I    R +  ++  +  L  VP++V +NF              L++  L  N I++L + 
Sbjct: 8   IGPCGRHTDHIDRRHSKLEQVPDDVIRNFRT------------LEECRLDANQIKELPKH 55

Query: 64  --------LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
                      +  + +L +S N+L+ LP  IG    L  LD+S N I ++P  I    +
Sbjct: 56  RASIXXXXFFRMKRIRLLTLSDNELTRLPTGIGSFSNLVELDISRNDISELPASIRFCDS 115

Query: 116 LVKFDCSSNQLKELPSSLGR-------CLN----------------LSDFKASNNCITSL 152
           L   D S+N L+ LP+   +       CLN                L   +  +NC+ S+
Sbjct: 116 LQSLDVSNNPLQSLPAGFCQLRNLRVLCLNDISIAELPEEIGSLQLLEKLELRDNCLKSI 175

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+  AD   +  LD+  N+   LS  +I   + L+EL    N L  +P+ +G+L  L +L
Sbjct: 176 PDSFADLIHLEFLDLGANEFQELS-PVIGQLSQLSELWIDDNELRSLPKELGNLGNLQQL 234

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           DL +N I ++P SISG  SL++  +  N+++ LP  LG L KL  L L+ N+L       
Sbjct: 235 DLSENLISTLPESISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRL------- 287

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
               L+V            P IG  ++L++L LT N L  L SS+ N     L+      
Sbjct: 288 ----LTVT-----------PTIGNCSSLQELYLTENFLSKLPSSIGN-----LVSMFHLN 327

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
           + +N+ +E  +     I   T L++    LSL   NL  +P EI     +  LD+S N +
Sbjct: 328 VDQNQLTELPSE----IGQCTSLNI----LSLRENNLHRLPDEIGNCTRLRVLDVSGNRL 379

Query: 393 QELPPELSSCA 403
             LP  LS C+
Sbjct: 380 DRLPFSLSRCS 390



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 124/239 (51%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L  N ++ + +   +L  L  L++  N+  EL   IG+L  L  L +  N +  +
Sbjct: 162 LEKLELRDNCLKSIPDSFADLIHLEFLDLGANEFQELSPVIGQLSQLSELWIDDNELRSL 221

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G+   L + D S N +  LP S+   ++LSD   S N IT LP  L D  K+  L 
Sbjct: 222 PKELGNLGNLQQLDLSENLISTLPESISGLVSLSDLNLSQNSITHLPNGLGDLDKLIILK 281

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L  ++   I + + L EL  ++N L+ +P +IG+L  +  L++ QN++  +PS I
Sbjct: 282 LNQNRLLTVTPT-IGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNVDQNQLTELPSEI 340

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C SL    +  N L  LP E+G  ++L  LD+  N+L        +  L+ L LS N
Sbjct: 341 GQCTSLNILSLRENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFSLSRCSLTALWLSQN 399



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 102/218 (46%), Gaps = 37/218 (16%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S N L  +P  IGS S L+ LD+ +N I  +P+SI  C SL    + NN L +LPA 
Sbjct: 73  LTLSDNELTRLPTGIGSFSNLVELDISRNDISELPASIRFCDSLQSLDVSNNPLQSLPAG 132

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
                                   CQLR L VL L++ S++ LP EIG +  L KL L  
Sbjct: 133 F-----------------------CQLRNLRVLCLNDISIAELPEEIGSLQLLEKLELRD 169

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L+++  S  +     L+      L  NE  E S     +I   ++LS    EL ++  
Sbjct: 170 NCLKSIPDSFAD-----LIHLEFLDLGANEFQELSP----VIGQLSQLS----ELWIDDN 216

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            L ++P E+   G + +LDLS N I  LP  +S   SL
Sbjct: 217 ELRSLPKELGNLGNLQQLDLSENLISTLPESISGLVSL 254



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 2/150 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L  L L+ N+I  L   L +L  L +L ++ N+L  +   IG    L+ L ++ N + 
Sbjct: 252 VSLSDLNLSQNSITHLPNGLGDLDKLIILKLNQNRLLTVTPTIGNCSSLQELYLTENFLS 311

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           K+P  IG+  ++   +   NQL ELPS +G+C +L+      N +  LP+++ +C+++  
Sbjct: 312 KLPSSIGNLVSMFHLNVDQNQLTELPSEIGQCTSLNILSLRENNLHRLPDEIGNCTRLRV 371

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           LDV GN+L  L  +L  S   LT L  S+N
Sbjct: 372 LDVSGNRLDRLPFSL--SRCSLTALWLSQN 399


>gi|455790003|gb|EMF41899.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 428

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 190/404 (47%), Gaps = 51/404 (12%)

Query: 27  EVYKNFDEAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           E+  + DE G      +A+    +++ L L+  N   L + +  L  L  L +  N+L  
Sbjct: 26  EIQADEDEPGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKT 85

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L++S N +  +P EIG    L + D   N+L  LP  +G+  NL   
Sbjct: 86  LPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTL 145

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             S+N +T+LP +      + +L++  N+LT L                        P+ 
Sbjct: 146 YLSSNQLTTLPRESGKLGNLQELNLSDNQLTTL------------------------PQE 181

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L+L  N++ ++   I    +L    + +N L+ LP E+GKL  L TL+L  
Sbjct: 182 IGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSD 241

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL    +E  +L+ L  L+LS+N L+ LP EIGK+  L  L L+GN L TL   +    
Sbjct: 242 NQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEI---- 297

Query: 322 TPALLKYLRS-RLPENEDSEASTTKEDLITMAT------RLSVTSKEL----SLEGMN-- 368
               L+ L+   L  N+ +  S   E L  + T      RL +  KE+    +L+ +N  
Sbjct: 298 --GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLW 355

Query: 369 ---LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
              L+A+P EI +   +  L L +N +   P E+    +LQ  +
Sbjct: 356 NNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLY 399



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 144/306 (47%), Gaps = 12/306 (3%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS+  L  +P E+ K  N       D     +        +LQ L L+ N +  L  +
Sbjct: 99  LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE 158

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
              L  L  LN+S N+L+ LP  IG+L  L++L++  N +  +  EI     L   + S 
Sbjct: 159 SGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSD 218

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL     S+N +  L  ++     +  L++  N+LT L    I   
Sbjct: 219 NQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIE-IGKL 277

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S N L  +P  IG L  L  L+LH N++ ++   I    +L    +  N L 
Sbjct: 278 QNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 337

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L  L+L +NQL    +E  QL+ L  L L  N L   P EIG++  L+ 
Sbjct: 338 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQT 397

Query: 303 LLLTGN 308
           L L G+
Sbjct: 398 LYLGGH 403



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 10/170 (5%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +LNLS+  L  +P E+ K  N       D     +        +L  L L+ N +  L  
Sbjct: 213 TLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPI 272

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+S N+L+ LP  IG+L  L+ L++  N +  +  EI     L     S
Sbjct: 273 EIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLS 332

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            N+L  LP  +G+  NL +    NN +T+LP ++     +  L +  N+L
Sbjct: 333 YNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRL 382



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 259 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSGNQLTTLPIEIGKLQNLQD 305

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ L   I +L  L++L +S+N ++ +P EIG    L + +  +NQL  LP  
Sbjct: 306 LNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 365

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           +G+  NL       N + + P+++     +  L + G+
Sbjct: 366 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 403


>gi|443290345|ref|ZP_21029439.1| putative Leucine-rich repeat protein [Micromonospora lupini str.
           Lupac 08]
 gi|385886672|emb|CCH17513.1| putative Leucine-rich repeat protein [Micromonospora lupini str.
           Lupac 08]
          Length = 1135

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 147/289 (50%), Gaps = 25/289 (8%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W A  L++L++  N + +L   +     LT LNV  NKL ELP A+     L+ LD+ +N
Sbjct: 113 WTA--LKRLVMDRNRLGELPHAVAGWTALTQLNVDRNKLGELPDAVAAWTALERLDMDYN 170

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +PD + + T L       N+L  LP ++     L++    +N +T+LP+ +A  + 
Sbjct: 171 QVRALPDAVAAWTRLDVLYLDDNELTALPDAVAAWTALNELHLDSNQLTALPDAVAAWTA 230

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +++L ++ N+LTVL    +A+WT L+ L    N L  +P+ + + + L  LDL+ N++  
Sbjct: 231 LNELHLDDNQLTVLPEA-VAAWTELSGLHLRSNRLTALPDAVAAWTALTLLDLYDNQLTV 289

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 281
           +P +++    L + Y+ +N L+ALP  +G  +                       L+ L 
Sbjct: 290 LPDAVAAWTDLTDLYLESNRLTALPDAVGGWNA----------------------LTDLF 327

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
           +  N L+ LP  IG++  LR L++ GNPL     +     T ALL +LR
Sbjct: 328 MEGNDLTALPGAIGRLAKLRMLVVDGNPLPPEVLAAETEGTEALLAFLR 376



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 158/317 (49%), Gaps = 16/317 (5%)

Query: 95  SLDVSFNSIMKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           SLD++ N++  +PD + +A T+L+  D SSN L  LP ++     L     S N +T+LP
Sbjct: 48  SLDLANNNLGTLPDAVAAAWTSLIVLDLSSNGLTALPDTVAAWTALERLVLSGNRLTALP 107

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           + +A  + + +L ++ N+L  L +  +A WT LT+L   +N L  +P+ + + + L RLD
Sbjct: 108 DAVAAWTALKRLVMDRNRLGELPHA-VAGWTALTQLNVDRNKLGELPDAVAAWTALERLD 166

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC-VEA 272
           +  N++ ++P +++    L   Y+ +N L+ALP  +   + L  L L SNQL       A
Sbjct: 167 MDYNQVRALPDAVAAWTRLDVLYLDDNELTALPDAVAAWTALNELHLDSNQLTALPDAVA 226

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
               L+ L L +N L+ LP  +   T L  L L  N L  L  ++       LL    ++
Sbjct: 227 AWTALNELHLDDNQLTVLPEAVAAWTELSGLHLRSNRLTALPDAVAAWTALTLLDLYDNQ 286

Query: 333 LPENEDSEASTTK-EDLITMATRLSVTSK---------ELSLEGMNLSAIPSEIWEAGEI 382
           L    D+ A+ T   DL   + RL+             +L +EG +L+A+P  I   G +
Sbjct: 287 LTVLPDAVAAWTDLTDLYLESNRLTALPDAVGGWNALTDLFMEGNDLTALPGAI---GRL 343

Query: 383 TKLDLSRNSIQELPPEL 399
            KL +       LPPE+
Sbjct: 344 AKLRMLVVDGNPLPPEV 360



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 138/270 (51%), Gaps = 3/270 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           D+  L LA+NN+  L + +      L VL++S N L+ LP  +     L+ L +S N + 
Sbjct: 45  DVVSLDLANNNLGTLPDAVAAAWTSLIVLDLSSNGLTALPDTVAAWTALERLVLSGNRLT 104

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PD + + TAL +     N+L ELP ++     L+      N +  LP+ +A  + + +
Sbjct: 105 ALPDAVAAWTALKRLVMDRNRLGELPHAVAGWTALTQLNVDRNKLGELPDAVAAWTALER 164

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N++  L +  +A+WT L  L    N L  +P+ + + + L  L L  N++ ++P 
Sbjct: 165 LDMDYNQVRALPDA-VAAWTRLDVLYLDDNELTALPDAVAAWTALNELHLDSNQLTALPD 223

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC-VEACQLRLSVLDLS 283
           +++   +L E ++ +N L+ LP  +   ++L  L L SN+L       A    L++LDL 
Sbjct: 224 AVAAWTALNELHLDDNQLTVLPEAVAAWTELSGLHLRSNRLTALPDAVAAWTALTLLDLY 283

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +N L+ LP  +   T L  L L  N L  L
Sbjct: 284 DNQLTVLPDAVAAWTDLTDLYLESNRLTAL 313



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 133/286 (46%), Gaps = 18/286 (6%)

Query: 145 SNNCITSLPEDLADC-SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
           +NN + +LP+ +A   + +  LD+  N LT L +  +A+WT L  L+ S N L  +P+ +
Sbjct: 52  ANNNLGTLPDAVAAAWTSLIVLDLSSNGLTALPDT-VAAWTALERLVLSGNRLTALPDAV 110

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
            + + L RL + +NR+  +P +++G  +L +  +  N L  LP  +   + L  LD+  N
Sbjct: 111 AAWTALKRLVMDRNRLGELPHAVAGWTALTQLNVDRNKLGELPDAVAAWTALERLDMDYN 170

Query: 264 QLKEYC-VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           Q++      A   RL VL L +N L+ LP  +   T L +L L  N L  L  ++     
Sbjct: 171 QVRALPDAVAAWTRLDVLYLDDNELTALPDAVAAWTALNELHLDSNQLTALPDAVA---- 226

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
            A        L +N+     T   + +   T LS     L L    L+A+P  +     +
Sbjct: 227 -AWTALNELHLDDNQ----LTVLPEAVAAWTELS----GLHLRSNRLTALPDAVAAWTAL 277

Query: 383 TKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISGCYLYWN 428
           T LDL  N +  LP  +++   L   +  L +N+ + +      WN
Sbjct: 278 TLLDLYDNQLTVLPDAVAAWTDLTDLY--LESNRLTALPDAVGGWN 321



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 125/294 (42%), Gaps = 18/294 (6%)

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
           +NL     +   +T L  D    + +  LD+  N L  L + + A+WT L  L  S N L
Sbjct: 21  VNLGGLGLTPEDLTELLRDTPAFADVVSLDLANNNLGTLPDAVAAAWTSLIVLDLSSNGL 80

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P+T+ + + L RL L  NR+ ++P +++   +L    M  N L  LP  +   + L 
Sbjct: 81  TALPDTVAAWTALERLVLSGNRLTALPDAVAAWTALKRLVMDRNRLGELPHAVAGWTALT 140

Query: 257 TLDLHSNQLKEYC-VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            L++  N+L E     A    L  LD+  N +  LP  +   T L  L L  N L  L  
Sbjct: 141 QLNVDRNKLGELPDAVAAWTALERLDMDYNQVRALPDAVAAWTRLDVLYLDDNELTALPD 200

Query: 316 SLVNGPTPALLKYLRSRLPE-NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           ++             + L E + DS   T   D +   T L+    EL L+   L+ +P 
Sbjct: 201 AVAAW----------TALNELHLDSNQLTALPDAVAAWTALN----ELHLDDNQLTVLPE 246

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISGCYLYWN 428
            +    E++ L L  N +  LP  +++  +L     DL  N+ + +      W 
Sbjct: 247 AVAAWTELSGLHLRSNRLTALPDAVAAWTAL--TLLDLYDNQLTVLPDAVAAWT 298


>gi|421119254|ref|ZP_15579578.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347884|gb|EKO98735.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 428

 Score =  134 bits (338), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 178/375 (47%), Gaps = 47/375 (12%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+  N   L +++  L  L  L +  N+L  LP  IG+L  L+ L++S N +  +P EIG
Sbjct: 55  LSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIG 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L + D   N+L  LP  +G+  NL     S+N +T+LP +      + +L++  N+
Sbjct: 115 KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L                        P+ IG L  L  L+L  N++ ++   I    +
Sbjct: 175 LTTL------------------------PQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKN 210

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + +N L+ LP E+GKL  L TL+L  NQL    +E  +L+ L  L+LS+N L+ L
Sbjct: 211 LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTL 270

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLI 349
           P EIGK+  L  L L+GN L TL   +        L+ L+   L  N+ +  S   E L 
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLTTLPIEI------GKLQNLQDLNLHSNQLTTLSKEIEQLK 324

Query: 350 TMAT------RLSVTSKEL----SLEGMN-----LSAIPSEIWEAGEITKLDLSRNSIQE 394
            + T      RL +  KE+    +L+ +N     L+A+P EI +   +  L L +N +  
Sbjct: 325 NLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMT 384

Query: 395 LPPELSSCASLQVKF 409
            P E+    +LQ  +
Sbjct: 385 FPKEIGQLKNLQTLY 399



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 144/306 (47%), Gaps = 12/306 (3%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNLS+  L  +P E+ K  N       D     +        +LQ L L+ N +  L  +
Sbjct: 99  LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRE 158

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
              L  L  LN+S N+L+ LP  IG+L  L++L++  N +  +  EI     L   + S 
Sbjct: 159 SGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSD 218

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  +G+  NL     S+N +  L  ++     +  L++  N+LT L    I   
Sbjct: 219 NQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIE-IGKL 277

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S N L  +P  IG L  L  L+LH N++ ++   I    +L    +  N L 
Sbjct: 278 QNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLV 337

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L  L+L +NQL    +E  QL+ L  L L  N L   P EIG++  L+ 
Sbjct: 338 ILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQT 397

Query: 303 LLLTGN 308
           L L G+
Sbjct: 398 LYLGGH 403



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 135/305 (44%), Gaps = 40/305 (13%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + KL +  N+L  L    I     L 
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKE-IGQLKNLQ 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY----------- 236
           EL  S N L  +P+ IG L  L RLDL+ NR+  +P  I    +L   Y           
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 237 ------------MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
                       + +N L+ LP E+G+L  L TL+L SNQL     E  QL+ L  L+LS
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLS 217

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAS 342
           +N L+ LP EIGK+  L  L L+ N L  L   +        L+ L +  L +N+ +   
Sbjct: 218 DNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEV------GKLQNLHTLNLSDNQLTTLP 271

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                L  + T        L+L G  L+ +P EI +   +  L+L  N +  L  E+   
Sbjct: 272 IEIGKLQNLHT--------LNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQL 323

Query: 403 ASLQV 407
            +LQ 
Sbjct: 324 KNLQT 328



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 10/170 (5%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +LNLS+  L  +P E+ K  N       D     +        +L  L L+ N +  L  
Sbjct: 213 TLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPI 272

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+S N+L+ LP  IG+L  L+ L++  N +  +  EI     L     S
Sbjct: 273 EIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLS 332

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            N+L  LP  +G+  NL +    NN +T+LP ++     +  L +  N+L
Sbjct: 333 YNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRL 382



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+ K               +L  L L+ N +  L  ++  L  L  
Sbjct: 259 TLNLSDNQLTTLPIEIGK-------------LQNLHTLNLSGNQLTTLPIEIGKLQNLQD 305

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ L   I +L  L++L +S+N ++ +P EIG    L + +  +NQL  LP  
Sbjct: 306 LNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIE 365

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           +G+  NL       N + + P+++     +  L + G+
Sbjct: 366 IGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 403


>gi|418744910|ref|ZP_13301255.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794241|gb|EKR92151.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 281

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 126/241 (52%), Gaps = 4/241 (1%)

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           E L+N   + +LN+ H  L+ LP  IG L  L+ LD+    +  +P EIG    L + D 
Sbjct: 33  EALKNPMDVRILNLGHYPLTSLPQEIGTLQRLERLDLE--KLTTLPKEIGRLQNLEELDL 90

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +SNQL + P  +G    L      +N   +LP+++    K+  L++  N+LT L N  I 
Sbjct: 91  TSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNE-IG 149

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L  L  S N L  +P+ I  L  L  LDL  N++ ++P  I    +L    +G+N 
Sbjct: 150 KLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQ 209

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L  LP E+GKL KLG L+L  NQL+    E  +LR L  LDL++N L  LP EIG +  L
Sbjct: 210 LGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGTLQRL 269

Query: 301 R 301
           R
Sbjct: 270 R 270



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 107/223 (47%), Gaps = 31/223 (13%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E +DL+KL      I +L+        L  L+++ N+L++ P  IG L  LK L +  N 
Sbjct: 65  ERLDLEKLTTLPKEIGRLQN-------LEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQ 117

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
              +P EIG    L   + S+NQL  LP+ +G+  +L     SNN +TSLP+++     +
Sbjct: 118 FATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNL 177

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LD+  N+                        L  +P+ IG L  L  LDL  N++ ++
Sbjct: 178 QYLDLFYNQ------------------------LGNLPKEIGKLRNLEWLDLGSNQLGNL 213

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           P  I     L E  +  N L +LP E+GKL KL  LDL SNQL
Sbjct: 214 PQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQL 256



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 123/274 (44%), Gaps = 45/274 (16%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNL  +      +TSLP+++    ++ +LD+E  KLT L    I     L EL  + N
Sbjct: 42  RILNLGHYP-----LTSLPQEIGTLQRLERLDLE--KLTTLPKE-IGRLQNLEELDLTSN 93

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L   P+ IG+L RL  L L  N+  ++P  I     L    + NN L+ LP E+GKL  
Sbjct: 94  QLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRS 153

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L L +NQL     E  +LR L  LDL  N L  LP EIGK+  L  L L  N L   
Sbjct: 154 LKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQL--- 210

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                              LP+             I    +L     EL L G  L ++P
Sbjct: 211 -----------------GNLPQE------------IGKLQKLG----ELELSGNQLRSLP 237

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            EI +  ++ KLDL+ N + +LP E+ +   L+ 
Sbjct: 238 QEIGKLRKLEKLDLTSNQLVKLPQEIGTLQRLRA 271



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 96/182 (52%), Gaps = 1/182 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L  N + K  +++  L  L  L++  N+ + LP  IG+L  L+ L++S N +  
Sbjct: 84  NLEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTT 143

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG   +L +   S+NQL  LP  + +  NL       N + +LP+++     +  L
Sbjct: 144 LPNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWL 203

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+L  L    I     L EL  S N L  +P+ IG L +L +LDL  N+++ +P  
Sbjct: 204 DLGSNQLGNLPQE-IGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQE 262

Query: 226 IS 227
           I 
Sbjct: 263 IG 264



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 1/163 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N    L +++  L  L  LN+S+N+L+ LP  IG+L  LK L +S N +  +
Sbjct: 108 LKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSL 167

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EI     L   D   NQL  LP  +G+  NL      +N + +LP+++    K+ +L+
Sbjct: 168 PQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQKLGELE 227

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           + GN+L  L    I     L +L  + N L  +P+ IG+L RL
Sbjct: 228 LSGNQLRSLPQE-IGKLRKLEKLDLTSNQLVKLPQEIGTLQRL 269


>gi|402591760|gb|EJW85689.1| leucine-rich repeat-containing protein 1, partial [Wuchereria
           bancrofti]
          Length = 581

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 155/309 (50%), Gaps = 24/309 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    + D+P E+ KN             + L+ L L+ N I +L + +  L  +T L
Sbjct: 88  LNLKGNDVSDLPEEI-KN------------CIQLKILDLSSNPITRLPQTITQLTSMTSL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+++P  IG L  L+SL+V  N +  +P  I     L + D   N+L +LP+ +
Sbjct: 135 GLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEI 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL +     N + +LPE +  C  + +LDV  NKL VL +  I     L +L  ++
Sbjct: 195 GMLENLEELYVDQNDLEALPESIIQCRSLEQLDVSENKLMVLPDE-IGDLEKLDDLTVAQ 253

Query: 194 NLLNGMPETIGS-------LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
           N L  +P +IG+       L +L  L   +N I  +  +I  C +L E Y+  N L+ +P
Sbjct: 254 NCLQVLPSSIGNNDIVTGRLKKLSILKADRNAITQLTPAIGSCHALTEIYLTENLLTEIP 313

Query: 247 AELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           + LG L  L TL+L  NQLKE    +  C   LSVL L +N +  LP EIG++  LR L 
Sbjct: 314 SSLGNLKSLRTLNLDKNQLKELPPTIGGCT-SLSVLSLRDNLIEQLPLEIGRLENLRVLD 372

Query: 305 LTGNPLRTL 313
           +  N L  L
Sbjct: 373 VCNNRLNYL 381



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 181/386 (46%), Gaps = 36/386 (9%)

Query: 20  SLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNK 79
           +L+ +P+++ +N            A  L+++ L  N+I+ L + L     L +L++S N+
Sbjct: 24  NLQSIPHDIDRN------------ARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENE 71

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           +  LP+ I  L  L+ L++  N +  +P+EI +   L   D SSN +  LP ++ +  ++
Sbjct: 72  VIRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSM 131

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
           +    ++  +T +P D+     +  L+V  N L  +  + I+    L  L    N L+ +
Sbjct: 132 TSLGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPS-ISELNQLRRLDLGHNELDDL 190

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P  IG L  L  L + QN + ++P SI  C SL +  +  N L  LP E+G L KL  L 
Sbjct: 191 PNEIGMLENLEELYVDQNDLEALPESIIQCRSLEQLDVSENKLMVLPDEIGDLEKLDDLT 250

Query: 260 LHSNQLK--------EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           +  N L+           V     +LS+L    N+++ L P IG    L ++ LT N L 
Sbjct: 251 VAQNCLQVLPSSIGNNDIVTGRLKKLSILKADRNAITQLTPAIGSCHALTEIYLTENLLT 310

Query: 312 TLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            + SSL N      LK LR+  L +N+  E   T    I   T LSV    LSL    + 
Sbjct: 311 EIPSSLGN------LKSLRTLNLDKNQLKELPPT----IGGCTSLSV----LSLRDNLIE 356

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELP 396
            +P EI     +  LD+  N +  LP
Sbjct: 357 QLPLEIGRLENLRVLDVCNNRLNYLP 382



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 155/354 (43%), Gaps = 32/354 (9%)

Query: 56  NIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N++ +  D+ RN   L  + +  N + +L   +     LK L +S N ++++P +I   T
Sbjct: 24  NLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEVIRLPSDIAHLT 83

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L + +   N + +LP  +  C+ L     S+N IT LP+ +   + M+ L +    LT 
Sbjct: 84  YLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMTSLGLNDISLT- 142

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
                                   MP  IG L  L  L++ +N + ++P SIS    L  
Sbjct: 143 -----------------------QMPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRR 179

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 293
             +G+N L  LP E+G L  L  L +  N L+       Q R L  LD+S N L  LP E
Sbjct: 180 LDLGHNELDDLPNEIGMLENLEELYVDQNDLEALPESIIQCRSLEQLDVSENKLMVLPDE 239

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           IG +  L  L +  N L+ L SS+ N         +  RL +    +A       +T A 
Sbjct: 240 IGDLEKLDDLTVAQNCLQVLPSSIGNN------DIVTGRLKKLSILKADRNAITQLTPAI 293

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
                  E+ L    L+ IPS +     +  L+L +N ++ELPP +  C SL V
Sbjct: 294 GSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSV 347



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 109/225 (48%), Gaps = 8/225 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L HN ++ L  ++  L  L  L V  N L  LP +I +   L+ LDVS N +M +
Sbjct: 177 LRRLDLGHNELDDLPNEIGMLENLEELYVDQNDLEALPESIIQCRSLEQLDVSENKLMVL 236

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLG-------RCLNLSDFKASNNCITSLPEDLADC 159
           PDEIG    L     + N L+ LPSS+G       R   LS  KA  N IT L   +  C
Sbjct: 237 PDEIGDLEKLDDLTVAQNCLQVLPSSIGNNDIVTGRLKKLSILKADRNAITQLTPAIGSC 296

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
             ++++ +  N LT + ++L  +   L  L   KN L  +P TIG  + L  L L  N I
Sbjct: 297 HALTEIYLTENLLTEIPSSL-GNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLI 355

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
             +P  I    +L    + NN L+ LP  +  L KL  L L  NQ
Sbjct: 356 EQLPLEIGRLENLRVLDVCNNRLNYLPFTVNVLFKLRALWLSENQ 400



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 19/262 (7%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++  LD     L  + +++  +   L E+    N +  + + +    +L  L L +N ++
Sbjct: 14  QVDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEVI 73

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
            +PS I+    L E  +  N +S LP E+    +L  LDL SN +        QL  ++ 
Sbjct: 74  RLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMTS 133

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L++ SL+ +P +IG +  LR L +  N LRT+  S+       L +  R  L  NE  
Sbjct: 134 LGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSIS-----ELNQLRRLDLGHNELD 188

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           +        I M   L    +EL ++  +L A+P  I +   + +LD+S N +  LP E+
Sbjct: 189 DLPNE----IGMLENL----EELYVDQNDLEALPESIIQCRSLEQLDVSENKLMVLPDEI 240

Query: 400 SSCASLQVKFSDLVTNKESCIS 421
                L     D +T  ++C+ 
Sbjct: 241 GDLEKL-----DDLTVAQNCLQ 257


>gi|313224282|emb|CBY20071.1| unnamed protein product [Oikopleura dioica]
          Length = 529

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 167/377 (44%), Gaps = 41/377 (10%)

Query: 37  EGDK---WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHML 93
           EGD     ++   L +L + HN + +L   L NL  L  L+ S NKL+E+P+ +GEL  L
Sbjct: 127 EGDVPLVIYQLSSLMELYMTHNKLTRLMSGLGNLRNLVHLDFSQNKLTEVPSELGELKAL 186

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           + L +  N +  IP+ I   T+L   D S NQLK LP  +G C NL+      N +  +P
Sbjct: 187 QKLMLKSNHLTSIPEAISQCTSLSILDMSHNQLKSLPEKIGNCENLTSLSLKYNRLQVIP 246

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           + +  C K+   +VE N+++    + +   TM+  L  S+N    +P+ +  L  L   D
Sbjct: 247 DSIDQCKKLVHFNVESNQISCFPPSFLKKCTMIQVLTISRNTFKDIPD-LSKLDNLTAFD 305

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
              N+I S+   +     + +  + NN +  +P E+     +  LD+ SN L+   V   
Sbjct: 306 GSFNKISSLRPKVFALPKILKVLLHNNLIKIIPPEIAIWKTVTELDISSNLLESVSVGIG 365

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
            L +L  L +SNN L  LP  IG M  LR L L  N +  + S                 
Sbjct: 366 NLDQLQELKISNNRLEFLPDTIGSMKALRVLELDENKIEYVPSD---------------- 409

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
                           I   T L V    L+L    +  +P++I     + KL L  N +
Sbjct: 410 ----------------IGFCTNLEV----LNLTSNKIEQLPTDIGSLQRLRKLLLGENDL 449

Query: 393 QELPPELSSCASLQVKF 409
            ++PP +    SLQ  F
Sbjct: 450 LQIPPHIGMLDSLQELF 466



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 168/366 (45%), Gaps = 16/366 (4%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           A  LQ L +  N I  L  ++  L  + +   S N++S LP ++  L  LK LD+  N +
Sbjct: 67  AKTLQNLYVQKNKIHTLPREIGCLREMQIFAASENQISSLPESLANLTSLKRLDLRHNKL 126

Query: 104 M-KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
              +P  I   ++L++   + N+L  L S LG   NL     S N +T +P +L +   +
Sbjct: 127 EGDVPLVIYQLSSLMELYMTHNKLTRLMSGLGNLRNLVHLDFSQNKLTEVPSELGELKAL 186

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            KL ++ N LT +    I+  T L+ L  S N L  +PE IG+   L  L L  NR+  I
Sbjct: 187 QKLMLKSNHLTSIP-EAISQCTSLSILDMSHNQLKSLPEKIGNCENLTSLSLKYNRLQVI 245

Query: 223 PSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 281
           P SI  C  L  F + +N +S  P   L K + +  L +  N  K+    +    L+  D
Sbjct: 246 PDSIDQCKKLVHFNVESNQISCFPPSFLKKCTMIQVLTISRNTFKDIPDLSKLDNLTAFD 305

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
            S N +S L P++  +  + K+LL  N ++ +       P  A+ K +        + + 
Sbjct: 306 GSFNKISSLRPKVFALPKILKVLLHNNLIKII------PPEIAIWKTV-------TELDI 352

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
           S+   + +++        +EL +    L  +P  I     +  L+L  N I+ +P ++  
Sbjct: 353 SSNLLESVSVGIGNLDQLQELKISNNRLEFLPDTIGSMKALRVLELDENKIEYVPSDIGF 412

Query: 402 CASLQV 407
           C +L+V
Sbjct: 413 CTNLEV 418



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 174/385 (45%), Gaps = 56/385 (14%)

Query: 20  SLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNK 79
           SL+D P +        G   K +  +D        ++ EK+K+ +R     T L++S   
Sbjct: 10  SLKDFPKK-------RGASSKDYRKLD-------RSDQEKIKKLIRESKGATTLDLSDQN 55

Query: 80  LSELPAAIGEL-HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLN 138
              + A I EL   L++L V  N I  +P EIG                        CL 
Sbjct: 56  NHSMSANISELAKTLQNLYVQKNKIHTLPREIG------------------------CLR 91

Query: 139 -LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
            +  F AS N I+SLPE LA+ + + +LD+  NKL      +I   + L EL  + N L 
Sbjct: 92  EMQIFAASENQISSLPESLANLTSLKRLDLRHNKLEGDVPLVIYQLSSLMELYMTHNKLT 151

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +   +G+L  L+ LD  QN++  +PS +    +L +  + +N L+++P  + + + L  
Sbjct: 152 RLMSGLGNLRNLVHLDFSQNKLTEVPSELGELKALQKLMLKSNHLTSIPEAISQCTSLSI 211

Query: 258 LDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
           LD+  NQLK     +  C+  L+ L L  N L  +P  I +   L    +  N +     
Sbjct: 212 LDMSHNQLKSLPEKIGNCE-NLTSLSLKYNRLQVIPDSIDQCKKLVHFNVESNQISCFPP 270

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
           S +   T  +++ L         + +  T +D+  ++   ++T+ + S     +S++  +
Sbjct: 271 SFLKKCT--MIQVL---------TISRNTFKDIPDLSKLDNLTAFDGSFN--KISSLRPK 317

Query: 376 IWEAGEITKLDLSRNSIQELPPELS 400
           ++   +I K+ L  N I+ +PPE++
Sbjct: 318 VFALPKILKVLLHNNLIKIIPPEIA 342



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 11/212 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGD---------KWWEAVDLQKLILAH 54
            LK       L +S  + +D+P+    +   A +G          K +    + K++L +
Sbjct: 272 FLKKCTMIQVLTISRNTFKDIPDLSKLDNLTAFDGSFNKISSLRPKVFALPKILKVLLHN 331

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I+ +  ++     +T L++S N L  +   IG L  L+ L +S N +  +PD IGS  
Sbjct: 332 NLIKIIPPEIAIWKTVTELDISSNLLESVSVGIGNLDQLQELKISNNRLEFLPDTIGSMK 391

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           AL   +   N+++ +PS +G C NL     ++N I  LP D+    ++ KL +  N L  
Sbjct: 392 ALRVLELDENKIEYVPSDIGFCTNLEVLNLTSNKIEQLPTDIGSLQRLRKLLLGENDLLQ 451

Query: 175 LSNNLIASWTMLTELIASKNL-LNGMPETIGS 205
           +  + I     L EL  + NL L+ +PE + +
Sbjct: 452 IPPH-IGMLDSLQELFINSNLNLHNLPEHLAN 482


>gi|328716327|ref|XP_003245897.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Acyrthosiphon
           pisum]
          Length = 559

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 193/400 (48%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L +VP+ VYK  D             L  L L  N I  + +D+  L  L +L
Sbjct: 153 LDLRHNKLTEVPDVVYK-LDT------------LTTLFLRFNRIRTVSDDISKLVNLVML 199

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ EL + IG+L  + + DVS N +  +P+EIG+   L   D   N+L ++P ++
Sbjct: 200 SLRENKIKELSSGIGKLDKVVTFDVSHNHLEHLPEEIGNCIQLSTLDLQHNELVDIPETI 259

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L+      N + +LP  L++C++M + +VEGN L+ L + L+ +   +  +  ++
Sbjct: 260 GNLTLLTRLGLRYNRLKNLPNSLSNCNRMDEFNVEGNMLSCLPDGLLVNLKEMNSITLAR 319

Query: 194 NLLNGMPETIGSLSRLIRLD---LHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P   G  ++ I +D      N+I  IP  I S    L +  M +NAL++LP ++
Sbjct: 320 NSFTAYP--TGGPAQFIAVDSINFEHNKIDKIPYGIFSKANYLTKLNMKDNALTSLPLDV 377

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L++ +N + +   +   L+ L VL LSNN L  LP  IG +  LR L L  N
Sbjct: 378 GSWTNMVELNVATNMITKLPDDIQYLQSLEVLILSNNLLKRLPATIGNLQKLRVLDLEEN 437

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L TL         P  + YLR        S    +    I   T L+     LS+    
Sbjct: 438 KLETL---------PQEIGYLRELQKLILQSNQLLSLPRAIGHLTNLAY----LSVGENK 484

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           LS +P EI     +  L ++ N S+  LP EL+ C+ LQ+
Sbjct: 485 LSTLPEEIGTLENLEALYINDNQSLHHLPFELALCSKLQL 524



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 25/206 (12%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           + +A  L KL +  N +  L  D+ +   +  LNV+ N +++LP  I  L  L+ L +S 
Sbjct: 354 FSKANYLTKLNMKDNALTSLPLDVGSWTNMVELNVATNMITKLPDDIQYLQSLEVLILSN 413

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + ++P  IG+   L   D   N+L+ LP  +G    L      +N + SLP  +   +
Sbjct: 414 NLLKRLPATIGNLQKLRVLDLEENKLETLPQEIGYLRELQKLILQSNQLLSLPRAIGHLT 473

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            ++ L V  NKL+ L                        PE IG+L  L  L ++ N+ L
Sbjct: 474 NLAYLSVGENKLSTL------------------------PEEIGTLENLEALYINDNQSL 509

Query: 221 -SIPSSISGCCSLAEFYMGNNALSAL 245
             +P  ++ C  L    + N  LS L
Sbjct: 510 HHLPFELALCSKLQLLGIENCPLSQL 535


>gi|348506994|ref|XP_003441042.1| PREDICTED: leucine-rich repeat-containing protein 1 [Oreochromis
           niloticus]
          Length = 524

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 137/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L++ +N+L  LP +IG L  LK L +  N + +
Sbjct: 152 NLVSLELRENVLTFLPESLSQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWLDGNHLTE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E+G+  +L+  D S N+L++LP  +G  ++L+D   S N I SLPE +    K+S L
Sbjct: 212 IPAELGNIKSLLCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNIDSLPESIGKLRKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+L  L  + I +   L+EL+ ++N L  +P +IG L RL  L+  +N++LS+P  
Sbjct: 272 KVDQNQLAYLPES-IGNCESLSELVLTENQLQSLPRSIGKLKRLFHLNCDRNQLLSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GC SL  F +  N L+ +P+EL + ++L  LD+  N+L    +    L+L  L LS N
Sbjct: 331 IGGCSSLNVFCVRENRLTRIPSELSQATELHVLDVSGNRLTHLPLSLTTLQLKALWLSEN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 163/354 (46%), Gaps = 41/354 (11%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK----------------------NF------- 32
           D I +  R+   L L    LRD+P + ++                      NF       
Sbjct: 29  DEIFRYGRSLEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQIIPAEIANFMQLVELD 88

Query: 33  ----DEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
               D  G  D       LQ    + N + KL E    L  LT L+++   L  LP  IG
Sbjct: 89  VSRNDILGIPDSISHCKALQVADFSGNPLTKLPESFTELRNLTCLSINDISLQLLPGNIG 148

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L SL++  N +  +P+ +     L + D  +N+L  LP S+G  ++L D     N 
Sbjct: 149 NLSNLVSLELRENVLTFLPESLSQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWLDGNH 208

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T +P +L +   +  LDV  NKL  L   +      LT+L+ S+N ++ +PE+IG L +
Sbjct: 209 LTEIPAELGNIKSLLCLDVSENKLEKLPEEM-GGLVSLTDLLVSQNNIDSLPESIGKLRK 267

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL--- 265
           L  L + QN++  +P SI  C SL+E  +  N L +LP  +GKL +L  L+   NQL   
Sbjct: 268 LSILKVDQNQLAYLPESIGNCESLSELVLTENQLQSLPRSIGKLKRLFHLNCDRNQLLSL 327

Query: 266 -KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            KE  +  C   L+V  +  N L+ +P E+ + T L  L ++GN L  L  SL 
Sbjct: 328 PKE--IGGCS-SLNVFCVRENRLTRIPSELSQATELHVLDVSGNRLTHLPLSLT 378



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 170/357 (47%), Gaps = 45/357 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L +LP    +L  L+ L +S N I  IP EI +   LV+ D S N +  +P S+  C 
Sbjct: 46  NQLRDLPKQFFQLVKLRKLGLSDNEIQIIPAEIANFMQLVELDVSRNDILGIPDSISHCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L +    L +L  N I + + L  L   +N+
Sbjct: 106 ALQVADF--SGNPLTKLPESFTELRNLTCLSINDISLQLLPGN-IGNLSNLVSLELRENV 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +PE++  L +L  LDL  N + S+P SI    SL + ++  N L+ +PAELG +  L
Sbjct: 163 LTFLPESLSQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWLDGNHLTEIPAELGNIKSL 222

Query: 256 GTLDLHSNQLKEYCVEACQL------------------------RLSVLDLSNNSLSGLP 291
             LD+  N+L++   E   L                        +LS+L +  N L+ LP
Sbjct: 223 LCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNIDSLPESIGKLRKLSILKVDQNQLAYLP 282

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             IG   +L +L+LT N L++L         P  +  L+     N D     +    I  
Sbjct: 283 ESIGNCESLSELVLTENQLQSL---------PRSIGKLKRLFHLNCDRNQLLSLPKEIGG 333

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
            + L+V      +    L+ IPSE+ +A E+  LD+S N +  LP  L+   +LQ+K
Sbjct: 334 CSSLNV----FCVRENRLTRIPSELSQATELHVLDVSGNRLTHLPLSLT---TLQLK 383



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 101/220 (45%), Gaps = 25/220 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N++ ++  +L N+  L  L+VS NKL +LP  +G L  L  L VS N+I 
Sbjct: 197 VSLKDLWLDGNHLTEIPAELGNIKSLLCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNID 256

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+ IG    L       NQL  LP S+G C +LS+   + N + SLP  +    ++  
Sbjct: 257 SLPESIGKLRKLSILKVDQNQLAYLPESIGNCESLSELVLTENQLQSLPRSIGKLKRLFH 316

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L+ + N+L                          +P+ IG  S L    + +NR+  IPS
Sbjct: 317 LNCDRNQLL------------------------SLPKEIGGCSSLNVFCVRENRLTRIPS 352

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            +S    L    +  N L+ LP  L  L +L  L L  NQ
Sbjct: 353 ELSQATELHVLDVSGNRLTHLPLSLTTL-QLKALWLSENQ 391



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 14/221 (6%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +P+    L +L +L L  N I  IP+ I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQIIPAEIANFMQLVELDVSRNDILGI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L +      +LR L+ L +++ SL  LP  IG ++ L  L 
Sbjct: 98  PDSISHCKALQVADFSGNPLTKLPESFTELRNLTCLSINDISLQLLPGNIGNLSNLVSLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL             S+L + E+ +    +   +  +    V+ K+L L
Sbjct: 158 LRENVLTFLPESL-------------SQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +G +L+ IP+E+     +  LD+S N +++LP E+    SL
Sbjct: 205 DGNHLTEIPAELGNIKSLLCLDVSENKLEKLPEEMGGLVSL 245


>gi|196010173|ref|XP_002114951.1| hypothetical protein TRIADDRAFT_28844 [Trichoplax adhaerens]
 gi|190582334|gb|EDV22407.1| hypothetical protein TRIADDRAFT_28844 [Trichoplax adhaerens]
          Length = 426

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 166/334 (49%), Gaps = 41/334 (12%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           ++  R+  +LNLS+  +  +P             D   +  +L  L+L   +I +L +D+
Sbjct: 99  IRFCRSLNTLNLSSNPVERLP-------------DSITQLRNLTYLMLNDISIVELPDDI 145

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
            +L  LTVL    N +  LP +I EL +L+ LD+  N I ++PD +GS   L +    +N
Sbjct: 146 GSLVNLTVLEARENYIKVLPKSICELTVLERLDLGANEIQELPDSLGSLLHLKELLLDTN 205

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL----- 179
           Q+K+LP+S+GR  NL     S NC+ SLP+++ +   ++ L +  N L  L +++     
Sbjct: 206 QIKKLPTSIGRLSNLESIDLSENCVESLPDEIGNVRNLTDLLLSSNLLQFLPSSIGKLRN 265

Query: 180 -----------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
                            I     LTEL+ ++N L  +P TIG L ++  L+  +N + SI
Sbjct: 266 LSMLKLDINRIEEISATIGGLMSLTELVLTENCLKQLPGTIGKLGKMNNLNADKNFLTSI 325

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL 282
           PS I  C +L    + +N L  LP+++GKL KL  LD+  N+L+   +   QL +  + L
Sbjct: 326 PSEIGNCTNLTVLSLRDNHLDHLPSQIGKLKKLTVLDVCGNRLESLPITVAQLNVKAIWL 385

Query: 283 SNN----SLSGLPPEI--GKMTTLRKLLLTGNPL 310
           S N    S+  LP  +  GK   L   LL   PL
Sbjct: 386 SENQSKPSVKLLPETLSDGKTEVLTCFLLPQQPL 419



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 195/418 (46%), Gaps = 52/418 (12%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYK--------NFDEAGEGD---KWWEAVDLQKLI 51
           RI    R   S++ S+ SL  VP+++Y+        N D     +   +++  + L+ L 
Sbjct: 4   RIFLCNRQIESVDKSHCSLSAVPDQIYRLHRCLEELNLDANQIQELPPQFFRLLKLRNLS 63

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L  N I++L  ++ +L  L  LN+  N++ ++P AI     L +L++S N + ++PD I 
Sbjct: 64  LEDNEIKRLPMEISSLTKLVELNLRQNEIYDIPEAIRFCRSLNTLNLSSNPVERLPDSIT 123

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L     +   + ELP  +G  +NL+  +A  N I  LP+ + + + + +LD+  N+
Sbjct: 124 QLRNLTYLMLNDISIVELPDDIGSLVNLTVLEARENYIKVLPKSICELTVLERLDLGANE 183

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  L ++L  S   L EL+   N +  +P +IG LS L  +DL +N + S+P  I    +
Sbjct: 184 IQELPDSL-GSLLHLKELLLDTNQIKKLPTSIGRLSNLESIDLSENCVESLPDEIGNVRN 242

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L +  + +N L  LP+ +GKL  L  L L  N+++E       L  L+ L L+ N L  L
Sbjct: 243 LTDLLLSSNLLQFLPSSIGKLRNLSMLKLDINRIEEISATIGGLMSLTELVLTENCLKQL 302

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P  IGK+  +  L                                N D    T+    I 
Sbjct: 303 PGTIGKLGKMNNL--------------------------------NADKNFLTSIPSEIG 330

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
             T L+V    LSL   +L  +PS+I +  ++T LD+  N ++ LP    + A L VK
Sbjct: 331 NCTNLTV----LSLRDNHLDHLPSQIGKLKKLTVLDVCGNRLESLP---ITVAQLNVK 381


>gi|73998572|ref|XP_535013.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Canis
           lupus familiaris]
 gi|301755536|ref|XP_002913604.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Ailuropoda
           melanoleuca]
 gi|410976089|ref|XP_003994458.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Felis
           catus]
 gi|281347753|gb|EFB23337.1| hypothetical protein PANDA_001424 [Ailuropoda melanoleuca]
          Length = 582

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 205/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            +++L +L L  N L  +  SL 
Sbjct: 282 NLSSLSRLGLRYNRLSAIPRSLA 304



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G L  L TL L+ N L    
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLP 162

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L +L +LDL +N L  +P  + ++ +L  L L  N + T+   + N    ++L  
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS- 221

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               + EN+  +      +L  + T        L +    L  +P EI    +IT LDL 
Sbjct: 222 ----IRENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCTQITNLDLQ 269

Query: 389 RNSIQELPPELSSCASL 405
            N + +LP  + + +SL
Sbjct: 270 HNELLDLPDTIGNLSSL 286


>gi|421119262|ref|ZP_15579586.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347892|gb|EKO98743.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 738

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 185/415 (44%), Gaps = 57/415 (13%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG--------EGDKWWEAVDLQKLILAHNNIEKLKE 62
           SL+LS   L  +PNE+   +N  E G           +  +  +LQ L L  N +  L  
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPV 157

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+  N+L+ LP  IG+L  L++L++  N +  +P EIG    L     S
Sbjct: 158 EIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLS 217

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL   P  +G+  NL +   + N + +LP+++    K+ KL+++GN++T L       
Sbjct: 218 ENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTL------- 270

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                      N L  +P  IG L  L  L L  NR+ ++P  I    +L    +G N L
Sbjct: 271 --------PKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQL 322

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP E+ KL  L  L L+ N+L     E  +L  L++L L NN +S LP EI K   L+
Sbjct: 323 TTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILQLKNNRISTLPKEIEKSKNLQ 382

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L L GN L TL   +                            E+L     R+ +   E
Sbjct: 383 ELNLRGNRLVTLPGEI----------------------GELKLLEELNLENNRIKILPNE 420

Query: 362 L---------SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +         +L G  L++IP EI     +  L L  N ++ LP ++     L+V
Sbjct: 421 IGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 475



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 157/356 (44%), Gaps = 46/356 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S    + LP  I +L  L+ LD+  N +   P  I     L   D S N+L  LP+
Sbjct: 52  ILDLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPN 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +GR  NL +     N + + P+++     +  L+++ N+L  L                
Sbjct: 112 EIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P  IG L  L +L+L +NR+  +P  I    +L    + +N L+ LP E+G+
Sbjct: 156 --------PVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL L  NQL  +  E  QL  L  LDL+ N L  LP EIG++  L KL L GN +
Sbjct: 208 LQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQI 267

Query: 311 RTLRSSLVNGPTPALLKYLR------------SRLPENEDSEASTTK------EDLITMA 352
            TL         PA +  L+            + LP  E  +    K        L T+ 
Sbjct: 268 TTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPR-EIGQLQNLKSLDLGGNQLTTLP 326

Query: 353 TRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             ++     KEL L G  L+ +P EIWE   +T L L  N I  LP E+    +LQ
Sbjct: 327 REINKLKNLKELYLNGNKLTIVPKEIWELENLTILQLKNNRISTLPKEIEKSKNLQ 382



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 166/390 (42%), Gaps = 65/390 (16%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L +L++S+N+L+ LP  IG+L  LKSLD+  N +  +P EI     L +   + N+L  +
Sbjct: 289 LQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIV 348

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +    NL+  +  NN I++LP+++     + +L++ GN+L  L    I    +L EL
Sbjct: 349 PKEIWELENLTILQLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGE-IGELKLLEEL 407

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N +  +P  IG+L  L   +L  N++ SIP  I    +L   Y+ NN L  LP ++
Sbjct: 408 NLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 467

Query: 250 GKLSKLGTLDLHSN---------------------------------------------- 263
            KL  L  L+L  N                                              
Sbjct: 468 EKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGGTYRNLNLALEQPLKILSL 527

Query: 264 -----QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                Q   +  E  +L+ L  L L + SL  LP EI ++  L  L L  N L++L   +
Sbjct: 528 SLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEI 587

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                  LL+ LRS      D  A+   E L     RL    + L L        P EIW
Sbjct: 588 ------GLLRNLRSL-----DIGANNEFEVLPKEIARLQ-NLRSLLLNQNRFKIFPKEIW 635

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQV 407
           E  ++  L+++ N +  LP ++     LQ+
Sbjct: 636 ELKKLVILNVNTNQLDALPEKIGRLKGLQM 665



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 137/307 (44%), Gaps = 37/307 (12%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT-------------- 173
           +L  +L   LN+     S    T+LP+++     + +LD+  N+L               
Sbjct: 39  DLTKALQNPLNVRILDLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLES 98

Query: 174 --------VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
                   V+  N I     L EL   KN L   P+ IG L  L  L+L  N++ ++P  
Sbjct: 99  LDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVE 158

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L +  +  N L+ LP E+G+L  L TL+L  NQL    VE  QL+ L  L LS 
Sbjct: 159 IGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSE 218

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+  P EIG++  L++L L GN L+TL         P  +  L+     N D    TT
Sbjct: 219 NQLTTFPKEIGQLENLQELDLNGNQLKTL---------PKEIGQLQKLEKLNLDGNQITT 269

Query: 345 ---KEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                 L T+   +      + LSL    L+ +P EI +   +  LDL  N +  LP E+
Sbjct: 270 LPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREI 329

Query: 400 SSCASLQ 406
           +   +L+
Sbjct: 330 NKLKNLK 336



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 6/194 (3%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ + + S  P  I  L  L+SL +   S++ +P EI     L       NQLK LP  
Sbjct: 527 LSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKE 586

Query: 133 LGRCLNLSDFK-ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTEL 189
           +G   NL      +NN    LP+++A    +  L +  N+  +    +   W +  L  L
Sbjct: 587 IGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEI---WELKKLVIL 643

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N L+ +PE IG L  L  LDL  NR+ ++PS I    +L E Y+  N +  LP E+
Sbjct: 644 NVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKMLPEEI 703

Query: 250 GKLSKLGTLDLHSN 263
            +L  L  L L+ N
Sbjct: 704 ARLQNLRKLTLYEN 717



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 181/414 (43%), Gaps = 37/414 (8%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG-EGDKW-------WEAVDLQKLILAHNNIEKLKE 62
           SL+L    L  +P E+   KN  E    G+K        WE  +L  L L +N I  L +
Sbjct: 314 SLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILQLKNNRISTLPK 373

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++     L  LN+  N+L  LP  IGEL +L+ L++  N I  +P+EIG+   L  F+ S
Sbjct: 374 EIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLS 433

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV--------EGNKLTV 174
            N+L  +P  +G   NL      NN + +LP  +     +  L++        E  K+  
Sbjct: 434 GNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQA 493

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L  N       + E    +NL   + + +  LS    L L   +    P  I    +L  
Sbjct: 494 LLPNCNIDLRDVEEGGTYRNLNLALEQPLKILS----LSLEYQQFSLFPKEILRLKNLRS 549

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL-SNNSLSGLPP 292
             + + +L ALP E+ +L  L  L L  NQLK    E   LR L  LD+ +NN    LP 
Sbjct: 550 LSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPK 609

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EI ++  LR LLL  N  +           P  +  L+  +  N ++       + I   
Sbjct: 610 EIARLQNLRSLLLNQNRFKIF---------PKEIWELKKLVILNVNTNQLDALPEKIGRL 660

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             L +    L L    L+ +PSEI +   +T+L L  N I+ LP E++   +L+
Sbjct: 661 KGLQM----LDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKMLPEEIARLQNLR 710



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 61/118 (51%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           A+N  E L +++  L  L  L ++ N+    P  I EL  L  L+V+ N +  +P++IG 
Sbjct: 600 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 659

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
              L   D S N+L  LPS +G+  NL++     N I  LPE++A    + KL +  N
Sbjct: 660 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKMLPEEIARLQNLRKLTLYEN 717



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 2/117 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L+L  N  +   +++  L  L +LNV+ N+L  LP  IG L  L+ LD+S N +  
Sbjct: 616 NLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTT 675

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +P EIG    L +     N++K LP  + R  NL       N I   P++L    K+
Sbjct: 676 LPSEIGQLHNLTELYLQYNRIKMLPEEIARLQNLRKLTLYENPIP--PQELDKIRKL 730



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 45/83 (54%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           WE   L  L +  N ++ L E +  L  L +L++SHN+L+ LP+ IG+LH L  L + +N
Sbjct: 635 WELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYN 694

Query: 102 SIMKIPDEIGSATALVKFDCSSN 124
            I  +P+EI     L K     N
Sbjct: 695 RIKMLPEEIARLQNLRKLTLYEN 717


>gi|417785509|ref|ZP_12433213.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951374|gb|EKO05889.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 426

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 156/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N++ ++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 398 KLYLHNNPL 406



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 26/355 (7%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L TL  ++   
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENI--- 321

Query: 321 PTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                L+ L++  L  N+ +      E L  + +        L LE   L+A+P EI + 
Sbjct: 322 ---GQLQRLQTLYLGNNQLNFLPNKVEQLQNLES--------LDLEHNQLNALPKEIGKL 370

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKF-------SDLVTNKESCISGCYLYW 427
            ++  L+L  N +  LP E+    +L+  +       S+ +      +  C +Y+
Sbjct: 371 QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPLPSEKIERIRKLLPQCNIYF 425


>gi|148669768|gb|EDL01715.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_a
           [Mus musculus]
          Length = 524

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 191/391 (48%), Gaps = 56/391 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NLP L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLPKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L         P  + YL+                DL           ++L L    
Sbjct: 459 KLESL---------PNEIAYLK----------------DL-----------QKLVLTNNQ 482

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           LS +P  I     +T L L  N +  LP E+
Sbjct: 483 LSTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 25/180 (13%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N L+ +P  IG L+ L  L L                       G N L+ LP E+G+
Sbjct: 479 TNNQLSTLPRGIGHLTNLTHLGL-----------------------GENLLTHLPEEIGR 515



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 14/197 (7%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +P S+     L E Y+ +N L +LPAE+G L  L TL L  N L    
Sbjct: 103 MRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L +L +LDL +N L  +P  + ++ +L  L L  N + T+   + N P  ++L  
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLS- 221

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               + EN+  +      +L  + T        L +    L  +P EI    +IT LDL 
Sbjct: 222 ----IRENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCTQITNLDLQ 269

Query: 389 RNSIQELPPELSSCASL 405
            N + +LP  + + +SL
Sbjct: 270 HNDLLDLPDTIGNLSSL 286



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 13/126 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+   L  +P +V      +G        V L+ LIL++N ++KL   L NL  L  L
Sbjct: 407 LNLATNQLTKIPEDV------SG-------LVSLEVLILSNNLLKKLPHGLGNLRKLREL 453

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NKL  LP  I  L  L+ L ++ N +  +P  IG  T L       N L  LP  +
Sbjct: 454 DLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513

Query: 134 GRCLNL 139
           GR L +
Sbjct: 514 GRNLRV 519


>gi|417765366|ref|ZP_12413328.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352303|gb|EJP04499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 385

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 113/338 (33%), Positives = 167/338 (49%), Gaps = 21/338 (6%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 44  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 103

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 104 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 162

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 163 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 222

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 223 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 282

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L+ L L  N L TL   +  G    L K   SR               L T+   + 
Sbjct: 283 LQNLQVLDLYQNRLTTLPKEI--GQLQNLQKLHLSR-------------NQLTTLPKEIG 327

Query: 357 VTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
              K   L L+   L+ +P EI +   + KL L  N +
Sbjct: 328 RLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPL 365



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/303 (34%), Positives = 153/303 (50%), Gaps = 17/303 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+              +  +LQ L   +N +  L +++  L  L  L
Sbjct: 57  LDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 103

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N+L  LP  +
Sbjct: 104 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI 163

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIASWTMLTELIA 191
           GR  NL +   S N +T LPE++     + KL + G NK  T+L    I     L EL  
Sbjct: 164 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQLQNLQELHL 222

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L+ LP E+ +
Sbjct: 223 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 282

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDL+ N+L     E  QL+ L  L LS N L+ LP EIG++  L  L L  N L
Sbjct: 283 LQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 342

Query: 311 RTL 313
            TL
Sbjct: 343 ATL 345



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 146/289 (50%), Gaps = 9/289 (3%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y N  EA +       +DL     + + ++ L +++  L  L +LN  +N+L+ LP  I
Sbjct: 40  LYTNLTEALKNPNEVRILDL-----SRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEI 94

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G+L  L+ L +  N +  +P+EIG    L     ++NQL  LP  +G+  NL +     N
Sbjct: 95  GKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVN 154

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL-IASKNL-LNGMPETIGS 205
            +  LP+++     + +L +  N+LT+L    I     L +L +  KN     +P+ I  
Sbjct: 155 RLNILPKEIGRLQNLQELYLSLNRLTILPEE-IGQLESLRKLSLGGKNKPFTILPKEITQ 213

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  L  L L  NR+  +P  I    +L    +  N L+ LP E+G+L  L  LDL  NQL
Sbjct: 214 LQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQL 273

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                E  QL+ L VLDL  N L+ LP EIG++  L+KL L+ N L TL
Sbjct: 274 TILPKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTL 322



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 129/292 (44%), Gaps = 42/292 (14%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S ++LK LP  +G+  NL    + NN +T+LP+++     + +L ++ N+LT L   
Sbjct: 57  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 116

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I     L  L  + N L  +PE IG L  L  L+L  NR+  +P  I    +L E Y+ 
Sbjct: 117 -IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLS 175

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCV---EACQLR-LSVLDLSNNSLSGLPPEI 294
            N L+ LP E+G+L  L  L L     K + +   E  QL+ L  L L  N L+ LP EI
Sbjct: 176 LNRLTILPEEIGQLESLRKLSLGGKN-KPFTILPKEITQLQNLQELHLKFNRLTVLPKEI 234

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           G++  LR L L  N L  L                          E    K  L+     
Sbjct: 235 GQLQNLRILDLYQNRLTIL------------------------PKEIGQLKNLLV----- 265

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                  L L G  L+ +P EI +   +  LDL +N +  LP E+    +LQ
Sbjct: 266 -------LDLSGNQLTILPKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQ 310



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 124/278 (44%), Gaps = 39/278 (14%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+L N  L  +P E+              +  +L+ L L +N +  L E++  L  L  
Sbjct: 102 ELHLQNNQLTTLPEEI-------------GQLQNLKVLHLNNNQLTTLPEEIGKLQNLQE 148

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS--------- 123
           LN+  N+L+ LP  IG L  L+ L +S N +  +P+EIG   +L K              
Sbjct: 149 LNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILP 208

Query: 124 ----------------NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
                           N+L  LP  +G+  NL       N +T LP+++     +  LD+
Sbjct: 209 KEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDL 268

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
            GN+LT+L    I     L  L   +N L  +P+ IG L  L +L L +N++ ++P  I 
Sbjct: 269 SGNQLTILPKE-ITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIG 327

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
               L    + +N L+ LP E+ +L  L  L LH+N L
Sbjct: 328 RLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPL 365



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 24/176 (13%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L +L++  N+L+ LP  IG+L  L  LD+S N +  
Sbjct: 216 NLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTI 275

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EI     L   D   N+L  LP  +G+  NL     S N +T+LP+++    K+  L
Sbjct: 276 LPKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESL 335

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
            ++ N+L  L                        PE I  L  L +L LH N +LS
Sbjct: 336 GLDHNQLATL------------------------PEEIKQLKNLKKLYLHNNPLLS 367



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 18/208 (8%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL ++++  +P  I    +L      NN L+ LP E+GKL  L  L L +NQL     E
Sbjct: 57  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 116

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL+ L VL L+NN L+ LP EIGK+  L++L L  N L  L   +             
Sbjct: 117 IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI------------- 163

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN--LSAIPSEIWEAGEITKLDLS 388
            RL   ++   S  +  ++        + ++LSL G N   + +P EI +   + +L L 
Sbjct: 164 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLK 223

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N +  LP E+    +L++   DL  N+
Sbjct: 224 FNRLTVLPKEIGQLQNLRI--LDLYQNR 249


>gi|359459073|ref|ZP_09247636.1| GTPase [Acaryochloris sp. CCMEE 5410]
          Length = 1082

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 155/315 (49%), Gaps = 17/315 (5%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLI-LAHNNIEK 59
           + R L+ A+ +G L LS+  L +VP  + K              +D   LI L++N +  
Sbjct: 6   LQRQLEQAKQTGELYLSDEDLTNVPLALAK--------------LDNLTLISLSNNQLTS 51

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           +  +L  L  LT L++S+N+L+ LP  + +L  L  L +S N    IP E+     L + 
Sbjct: 52  VPPELAQLRKLTALDLSNNQLTSLPPELAQLKNLTLLYLSNNQFTNIPLELTHLVNLREL 111

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           DC SNQL  +P  L    NL+     +N +TS+P +LA    + +L +  N+LT +   L
Sbjct: 112 DCHSNQLTSVPPELAHLENLNKLDLRDNQLTSVPPELAHLENLKELYLSANQLTHIPQEL 171

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
            A    LT L  S N L G+P  +  L  L  L L  N++ S+P  ++   +L E Y+ +
Sbjct: 172 -AQLRNLTLLSLSANQLTGVPPALAHLENLEVLSLRTNQLTSLPPELAHLANLRELYLRS 230

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L  +P EL  L  L  L L  NQL     E  QL+ L  L LS N L+ LPPE  ++ 
Sbjct: 231 NKLINVPPELAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKELHLSGNQLTSLPPEFAQLK 290

Query: 299 TLRKLLLTGNPLRTL 313
            L  L L  N L  L
Sbjct: 291 NLTWLYLRSNQLANL 305



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 166/346 (47%), Gaps = 45/346 (13%)

Query: 62  EDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           EDL N+PL       LT++++S+N+L+ +P  + +L  L +LD+S N +  +P E+    
Sbjct: 24  EDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLTALDLSNNQLTSLPPELAQLK 83

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L     S+NQ   +P  L   +NL +    +N +TS+P +LA    ++KLD+  N+LT 
Sbjct: 84  NLTLLYLSNNQFTNIPLELTHLVNLRELDCHSNQLTSVPPELAHLENLNKLDLRDNQLTS 143

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           +   L A    L EL  S N L  +P+ +  L  L  L L  N++  +P +++   +L  
Sbjct: 144 VPPEL-AHLENLKELYLSANQLTHIPQELAQLRNLTLLSLSANQLTGVPPALAHLENLEV 202

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
             +  N L++LP EL  L+ L  L L SN+L     E   L  L++L LS N L+ LPPE
Sbjct: 203 LSLRTNQLTSLPPELAHLANLRELYLRSNKLINVPPELAHLEHLTLLSLSYNQLTSLPPE 262

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
             ++  L++L L+GN L +L       P  A LK L                        
Sbjct: 263 FAQLKNLKELHLSGNQLTSL------PPEFAQLKNL------------------------ 292

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                   L L    L+ +P E  +   +T+LDL  N +  + PE+
Sbjct: 293 ------TWLYLRSNQLANLPPEFAQLKNLTELDLRDNQLSNISPEI 332



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 151/337 (44%), Gaps = 44/337 (13%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S   L+ +P A+ +L  L  + +S N +  +P E+     L   D S+NQL  LP  
Sbjct: 19  LYLSDEDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLTALDLSNNQLTSLPPE 78

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           L +  NL+    SNN  T++P +L     + +LD   N+LT                   
Sbjct: 79  LAQLKNLTLLYLSNNQFTNIPLELTHLVNLRELDCHSNQLT------------------- 119

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                 +P  +  L  L +LDL  N++ S+P  ++   +L E Y+  N L+ +P EL +L
Sbjct: 120 -----SVPPELAHLENLNKLDLRDNQLTSVPPELAHLENLKELYLSANQLTHIPQELAQL 174

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L L +NQL         L  L VL L  N L+ LPPE+  +  LR+L L  N   
Sbjct: 175 RNLTLLSLSANQLTGVPPALAHLENLEVLSLRTNQLTSLPPELAHLANLRELYLRSN--- 231

Query: 312 TLRSSLVNGPTP-ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMN 368
                L+N P   A L++L         +  S +   L ++    +     KEL L G  
Sbjct: 232 ----KLINVPPELAHLEHL---------TLLSLSYNQLTSLPPEFAQLKNLKELHLSGNQ 278

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           L+++P E  +   +T L L  N +  LPPE +   +L
Sbjct: 279 LTSLPPEFAQLKNLTWLYLRSNQLANLPPEFAQLKNL 315



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 1/181 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L+ N +  + ++L  L  LT+L++S N+L+ +P A+  L  L+ L +  N +  
Sbjct: 153 NLKELYLSANQLTHIPQELAQLRNLTLLSLSANQLTGVPPALAHLENLEVLSLRTNQLTS 212

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+     L +    SN+L  +P  L    +L+    S N +TSLP + A    + +L
Sbjct: 213 LPPELAHLANLRELYLRSNKLINVPPELAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKEL 272

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            + GN+LT L     A    LT L    N L  +P     L  L  LDL  N++ +I   
Sbjct: 273 HLSGNQLTSLPPEF-AQLKNLTWLYLRSNQLANLPPEFAQLKNLTELDLRDNQLSNISPE 331

Query: 226 I 226
           I
Sbjct: 332 I 332



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 23/192 (11%)

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
            E Y+ +  L+ +P  L KL  L  + L +NQL     E  QLR L+ LDLSNN L+ LP
Sbjct: 17  GELYLSDEDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLTALDLSNNQLTSLP 76

Query: 292 PEIGKMTTLRKLLLTGNPLRTLR---SSLVN-----------GPTPALLKYLR--SRLPE 335
           PE+ ++  L  L L+ N    +    + LVN              P  L +L   ++L +
Sbjct: 77  PELAQLKNLTLLYLSNNQFTNIPLELTHLVNLRELDCHSNQLTSVPPELAHLENLNKL-D 135

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
             D++ ++   +L  +        KEL L    L+ IP E+ +   +T L LS N +  +
Sbjct: 136 LRDNQLTSVPPELAHLE-----NLKELYLSANQLTHIPQELAQLRNLTLLSLSANQLTGV 190

Query: 396 PPELSSCASLQV 407
           PP L+   +L+V
Sbjct: 191 PPALAHLENLEV 202



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 68/139 (48%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N +  L  +L +L  L  L +  NKL  +P  +  L  L  L +S+N +  
Sbjct: 199 NLEVLSLRTNQLTSLPPELAHLANLRELYLRSNKLINVPPELAHLEHLTLLSLSYNQLTS 258

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E      L +   S NQL  LP    +  NL+     +N + +LP + A    +++L
Sbjct: 259 LPPEFAQLKNLKELHLSGNQLTSLPPEFAQLKNLTWLYLRSNQLANLPPEFAQLKNLTEL 318

Query: 166 DVEGNKLTVLSNNLIASWT 184
           D+  N+L+ +S  ++A  T
Sbjct: 319 DLRDNQLSNISPEILAQGT 337


>gi|110626183|ref|NP_001007176.1| protein scribble homolog [Danio rerio]
 gi|123904207|sp|Q4H4B6.1|SCRIB_DANRE RecName: Full=Protein scribble homolog; AltName: Full=Scribble1
 gi|71000206|dbj|BAE07162.1| scribble1 [Danio rerio]
          Length = 1724

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 176/359 (49%), Gaps = 61/359 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL  VP+E+Y+          + ++  E  K ++   +L+KL L+ N I+KL  D+ N  
Sbjct: 23  SLTAVPDEIYRYNRSLEELLLDANQLRELPKPFFRLHNLRKLGLSDNEIQKLPPDVANFT 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD-------------------- 108
            L  L++S N +SE+P  I     L+  D S N + ++PD                    
Sbjct: 83  QLVELDISRNDISEIPENIKFCQSLEIADFSGNPLTRLPDGFTQLRGLAHLSLNDVSLQS 142

Query: 109 ---EIGSATALV-----------------------KFDCSSNQLKELPSSLGRCLNLSDF 142
              +IG+ + LV                       + D  SN L+ LP +LG   NL + 
Sbjct: 143 LPNDIGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLDLGSNVLEVLPDTLGALPNLREL 202

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
               N ++SLP +L +  ++  LDV  N+L+ L    I+    LT+L+ S+NLL  +P++
Sbjct: 203 WLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTE-ISGLIALTDLLLSENLLEILPDS 261

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IGSL +L  L ++QNR++ +  SI  C +L E  +  N L +LP  LGKL KL  L++  
Sbjct: 262 IGSLKKLSILKVNQNRLVHLTDSIGECENLTELMLTENLLQSLPRSLGKLKKLTNLNVDR 321

Query: 263 NQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           N+L     E   C + L+VL L +N L  LPPE+   T L  L + GN L+ L  +L N
Sbjct: 322 NRLSSVPAELGGC-VSLNVLSLRDNRLGKLPPELANATELHVLDVAGNRLQNLPFALAN 379



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 167/343 (48%), Gaps = 39/343 (11%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     LH L+ L +S N I K+P ++ + T LV+ D S N + E+P ++  C 
Sbjct: 46  NQLRELPKPFFRLHNLRKLGLSDNEIQKLPPDVANFTQLVELDISRNDISEIPENIKFCQ 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LP+       ++ L +  N ++                      
Sbjct: 106 SLEIADF--SGNPLTRLPDGFTQLRGLAHLSL--NDVS---------------------- 139

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG+LS L+ L+L +N + S+PSS+S    L +  +G+N L  LP  LG L  L
Sbjct: 140 LQSLPNDIGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLDLGSNVLEVLPDTLGALPNL 199

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L  NQL     E   LR L  LD+S N LS LP EI  +  L  LLL+ N L  L 
Sbjct: 200 RELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTEISGLIALTDLLLSENLLEILP 259

Query: 315 SSLVNGPTPALLKYLRSRLPENEDS--------EASTTKEDLITMATRLSVTSK--ELSL 364
            S+ +    ++LK  ++RL    DS        E   T+  L ++   L    K   L++
Sbjct: 260 DSIGSLKKLSILKVNQNRLVHLTDSIGECENLTELMLTENLLQSLPRSLGKLKKLTNLNV 319

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +   LS++P+E+     +  L L  N + +LPPEL++   L V
Sbjct: 320 DRNRLSSVPAELGGCVSLNVLSLRDNRLGKLPPELANATELHV 362



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N +E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGSNVLEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRQLVCLDVSENRLS 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P EI    AL     S N L+ LP S+G    LS  K + N +  L + + +C     
Sbjct: 234 ELPTEISGLIALTDLLLSENLLEILPDSIGSLKKLSILKVNQNRLVHLTDSIGECEN--- 290

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                LTEL+ ++NLL  +P ++G L +L  L++ +NR+ S+P+
Sbjct: 291 ---------------------LTELMLTENLLQSLPRSLGKLKKLTNLNVDRNRLSSVPA 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            + GC SL    + +N L  LP EL   ++L  LD+  N+L+        L L  + L+ 
Sbjct: 330 ELGGCVSLNVLSLRDNRLGKLPPELANATELHVLDVAGNRLQNLPFALANLNLKAMWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 104/235 (44%), Gaps = 14/235 (5%)

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT + + +      L EL+   N L  +P+    L  L +L L  N I  +P  ++    
Sbjct: 24  LTAVPDEIYRYNRSLEELLLDANQLRELPKPFFRLHNLRKLGLSDNEIQKLPPDVANFTQ 83

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L E  +  N +S +P  +     L   D   N L        QLR L+ L L++ SL  L
Sbjct: 84  LVELDISRNDISEIPENIKFCQSLEIADFSGNPLTRLPDGFTQLRGLAHLSLNDVSLQSL 143

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P +IG ++ L  L L  N L++L SSL       L+K  +  L  N       T   L  
Sbjct: 144 PNDIGNLSNLVTLELRENLLKSLPSSLS-----FLVKLEQLDLGSNVLEVLPDTLGALPN 198

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +        +EL L+   LS++P E+    ++  LD+S N + ELP E+S   +L
Sbjct: 199 L--------RELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTEISGLIAL 245


>gi|197100985|ref|NP_001126707.1| leucine-rich repeat protein SHOC-2 [Pongo abelii]
 gi|55732408|emb|CAH92905.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 205/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENALTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            +++L +L L  N L  +  SL 
Sbjct: 282 NLSSLSRLGLRYNRLSAIPRSLA 304



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS N+L+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 144 ---CLVNLMTLALSENALTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 199

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   ++LS+    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSKLSM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ +C   Q+   DL  N+
Sbjct: 247 HNQLEHLPKEIGNCT--QITNLDLQHNE 272


>gi|332212811|ref|XP_003255512.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Nomascus
           leucogenys]
 gi|441600055|ref|XP_004087585.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Nomascus
           leucogenys]
          Length = 582

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 205/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            +++L +L L  N L  +  SL 
Sbjct: 282 NLSSLSRLGLRYNRLSAIPRSLA 304



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 199

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   ++LS+    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSKLSM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ +C   Q+   DL  N+
Sbjct: 247 HNQLEHLPKEIGNCT--QITNLDLQHNE 272


>gi|355719293|gb|AES06552.1| soc-2 suppressor of clear-like protein [Mustela putorius furo]
          Length = 582

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 205/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            +++L +L L  N L  +  SL 
Sbjct: 282 NLSSLSRLGLRYNRLSAIPRSLA 304



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G L  L TL L+ N L    
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNENSLTSLP 162

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L +L +LDL +N L  +P  + ++ +L  L L  N + T+   + N    ++L  
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS- 221

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               + EN+  +      +L  + T        L +    L  +P EI    +IT LDL 
Sbjct: 222 ----IRENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCTQITNLDLQ 269

Query: 389 RNSIQELPPELSSCASL 405
            N + +LP  + + +SL
Sbjct: 270 HNELLDLPDTIGNLSSL 286


>gi|418727702|ref|ZP_13286290.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959060|gb|EKO22837.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 378

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 154/309 (49%), Gaps = 28/309 (9%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y++  +A     +   +D++ LIL+   ++ L E +  L  L +LN+S N+L  LP  I
Sbjct: 35  IYRDLTKA-----FQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEI 89

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +++N     P EI    +L K   S+NQL  LP  +G+  NL +    NN
Sbjct: 90  RQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNN 149

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLT---------------VLSNNLIASWTM------- 185
            + ++ +++     + KL ++ N+LT                LSNN + ++         
Sbjct: 150 QLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQN 209

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL  S N L   P+ IG L +L  L L  N++ +IP+ I     L E  +  N L+ +
Sbjct: 210 LQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTI 269

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P E+G+L  L  L L  NQ K   VE  QL+ L +L L  N L+ LP EIGK+  L+ L 
Sbjct: 270 PKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLN 329

Query: 305 LTGNPLRTL 313
           L  N L T+
Sbjct: 330 LDANQLITI 338



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 142/296 (47%), Gaps = 15/296 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS+  L  +P E+              +  +LQ+L L +N  +   +++  L  L  L
Sbjct: 75  LNLSDNQLIILPKEIR-------------QLKNLQELFLNYNQFKTFPKEIEQLKSLHKL 121

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +S+N+L+ LP  IG+L  L+ L++  N +  I  EI     L K    +NQL   P  +
Sbjct: 122 YLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEI 181

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     SNN +T+ P+++     + +L +  N+LT      I     L  L    
Sbjct: 182 GKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKE-IGKLQKLQWLGLGD 240

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L +L  L+L  N++ +IP  I    +L   ++  N    +P E G+L 
Sbjct: 241 NQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLK 300

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            L  L L +NQL     E  +L+ L +L+L  N L  +P EIG++  L+ L L  N
Sbjct: 301 NLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNN 356



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 155/364 (42%), Gaps = 64/364 (17%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ L +S   +  +P++IG    L   + S NQL  LP  + +  NL +   + N   + 
Sbjct: 49  VRVLILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQFKTF 108

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + KL +  N+LT+L                        P  IG L  L  L
Sbjct: 109 PKEIEQLKSLHKLYLSNNQLTIL------------------------PVEIGQLQNLQEL 144

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L  N++ +I   I    +L + Y+ NN L+A P E+GKL  L +L L +NQL  +  E 
Sbjct: 145 NLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEI 204

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            +L+ L  L LSNN L+  P EIGK+  L+ L L  N L T+         P  +  L+ 
Sbjct: 205 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTI---------PNEIGKLQK 255

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTS-------------------KELSLEGMNLSAI 372
               N D    TT    I     L V                     K LSL+   L+A+
Sbjct: 256 LQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTAL 315

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV------KFSDLVTNKESC---ISGC 423
           P EI +   +  L+L  N +  +P E+    +LQ       +FS  +  KE     +  C
Sbjct: 316 PKEIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFS--IEEKERIRKLLPKC 373

Query: 424 YLYW 427
            +Y+
Sbjct: 374 QIYF 377



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 139/301 (46%), Gaps = 43/301 (14%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           ++  ++   L LSN  L  +P E+              +  +LQ+L L +N ++ + +++
Sbjct: 112 IEQLKSLHKLYLSNNQLTILPVEI-------------GQLQNLQELNLWNNQLKTISKEI 158

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L + +N+L+  P  IG+L  LKSL +S N +   P EIG    L +   S+N
Sbjct: 159 EQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNN 218

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL   P  +G+   L      +N +T++P ++    K+ +L+++ N+LT           
Sbjct: 219 QLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTT---------- 268

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
                         +P+ IG L  L  L L  N+  +IP       +L    +  N L+A
Sbjct: 269 --------------IPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTA 314

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+GKL  L  L+L +NQL     E  QL+ L  L L NN  S     I +   +RKL
Sbjct: 315 LPKEIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFS-----IEEKERIRKL 369

Query: 304 L 304
           L
Sbjct: 370 L 370


>gi|421090943|ref|ZP_15551732.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000270|gb|EKO50915.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 376

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 150/301 (49%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS    + +P E+ K               +LQ+L L  N +  L +++  L  L  L
Sbjct: 51  LNLSANRFKTLPKEIGK-------------LKNLQELNLNKNQLTILPKEIGQLKNLRKL 97

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+ + LP  + +L  LK L +  N +  +P+EIG    L     + NQ K +P  +
Sbjct: 98  NLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEI 157

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL      NN +T+LP ++     +  LD+  N+LT L N  I     L +L  S 
Sbjct: 158 GQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNE-IGQLQKLQDLYLST 216

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L L  N++  +P+ I    +L   Y+ +N L+ L  ++ +L 
Sbjct: 217 NRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQ 276

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L +LDL +NQL  +  E  QL+ L VLDL +N L+ LP EI ++  L+ L L  N L T
Sbjct: 277 NLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTT 336

Query: 313 L 313
           +
Sbjct: 337 I 337



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 145/270 (53%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++  N   
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+     L +    SN+L  LP+ +G+  NL   K ++N   ++P+++     +  
Sbjct: 106 ILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQT 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+LT L N  I     L  L    N L  +P  IG L +L  L L  NR+ ++P+
Sbjct: 166 LNLGNNQLTALPNE-IGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPN 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+G+N L+ LP E+G+L  L TL L SN+L     +  QL+ L  LDL 
Sbjct: 225 EIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLW 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           NN L+  P EI ++  L+ L L  N L TL
Sbjct: 285 NNQLTTFPKEIEQLKNLQVLDLGSNQLTTL 314



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 147/308 (47%), Gaps = 36/308 (11%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNL+   L  +P E+   KN  +    D  +  +        +L++L L  N +  L  +
Sbjct: 74  LNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNE 133

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL ++HN+   +P  IG+L  L++L++  N +  +P+EIG    L   D  S
Sbjct: 134 IGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGS 193

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP+ +G+   L D   S N +T+LP ++     + +L +  N+LT+L        
Sbjct: 194 NRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTIL-------- 245

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  IG L  L  L L  NR+ ++   I    +L    + NN L+
Sbjct: 246 ----------------PNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLT 289

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
             P E+ +L  L  LDL SNQL     E  QL+ L VLDL +N L+ +P EIG++  L +
Sbjct: 290 TFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTTIPKEIGQLQNL-Q 348

Query: 303 LLLTGNPL 310
           L L  N L
Sbjct: 349 LYLNNNQL 356



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 155/340 (45%), Gaps = 40/340 (11%)

Query: 82  ELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
           +L  AI     ++ L++S N    +P EIG    L + + + NQL  LP  +G+  NL  
Sbjct: 37  DLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRK 96

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
               +N  T LP+++     + +L +  N+LT L                        P 
Sbjct: 97  LNLHDNQFTILPKEVEKLENLKELSLGSNRLTTL------------------------PN 132

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N+  +IP  I    +L    +GNN L+ALP E+G+L  L +LDL 
Sbjct: 133 EIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLG 192

Query: 262 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
           SN+L     E  QL +L  L LS N L+ LP EIG++  L++L L  N L  L + +   
Sbjct: 193 SNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQL 252

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                L YLRS       +  +T  +D+  +        K L L    L+  P EI +  
Sbjct: 253 KNLQTL-YLRS-------NRLTTLSKDIEQLQ-----NLKSLDLWNNQLTTFPKEIEQLK 299

Query: 381 EITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCI 420
            +  LDL  N +  LP E+    +LQV   DL +N+ + I
Sbjct: 300 NLQVLDLGSNQLTTLPEEIEQLKNLQV--LDLGSNQLTTI 337



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 38/232 (16%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL N  L  +PNE+ +                                 L+N   L  
Sbjct: 165 TLNLGNNQLTALPNEIGQ---------------------------------LQN---LKS 188

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+ LP  IG+L  L+ L +S N +  +P+EIG    L +    SNQL  LP+ 
Sbjct: 189 LDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNE 248

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL      +N +T+L +D+     +  LD+  N+LT      I     L  L   
Sbjct: 249 IGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKE-IEQLKNLQVLDLG 307

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            N L  +PE I  L  L  LDL  N++ +IP  I    +L + Y+ NN LS+
Sbjct: 308 SNQLTTLPEEIEQLKNLQVLDLGSNQLTTIPKEIGQLQNL-QLYLNNNQLSS 358


>gi|41281398|ref|NP_031399.2| leucine-rich repeat protein SHOC-2 isoform 1 [Homo sapiens]
 gi|114632804|ref|XP_521602.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
           troglodytes]
 gi|149689670|ref|XP_001496623.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Equus caballus]
 gi|194042023|ref|XP_001927528.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Sus scrofa]
 gi|296221216|ref|XP_002756642.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Callithrix
           jacchus]
 gi|332835019|ref|XP_003312812.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Pan troglodytes]
 gi|395828086|ref|XP_003787217.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Otolemur garnettii]
 gi|397510493|ref|XP_003825630.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Pan
           paniscus]
 gi|397510495|ref|XP_003825631.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
           paniscus]
 gi|426366199|ref|XP_004050149.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Gorilla gorilla
           gorilla]
 gi|14423936|sp|Q9UQ13.2|SHOC2_HUMAN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|166977684|sp|Q5RAV5.2|SHOC2_PONAB RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|3252979|gb|AAC39856.1| Ras-binding protein SUR-8 [Homo sapiens]
 gi|3293320|gb|AAC25698.1| leucine-rich repeat protein SHOC-2 [Homo sapiens]
 gi|29792199|gb|AAH50445.1| Soc-2 suppressor of clear homolog (C. elegans) [Homo sapiens]
 gi|119569933|gb|EAW49548.1| soc-2 suppressor of clear homolog (C. elegans), isoform CRA_a [Homo
           sapiens]
 gi|410217418|gb|JAA05928.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410217420|gb|JAA05929.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410267376|gb|JAA21654.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410302564|gb|JAA29882.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410333721|gb|JAA35807.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|417402990|gb|JAA48322.1| Putative leucine-rich repeat protein shoc-2 [Desmodus rotundus]
 gi|431895441|gb|ELK04957.1| Leucine-rich repeat protein SHOC-2 [Pteropus alecto]
          Length = 582

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 205/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            +++L +L L  N L  +  SL 
Sbjct: 282 NLSSLSRLGLRYNRLSAIPRSLA 304



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 199

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   ++LS+    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSKLSM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ +C   Q+   DL  N+
Sbjct: 247 HNQLEHLPKEIGNCT--QITNLDLQHNE 272


>gi|168269502|dbj|BAG09878.1| leucine-rich repeat protein SHOC-2 [synthetic construct]
          Length = 582

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 205/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPLELALCSKLSI 545



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            +++L +L L  N L  +  SL 
Sbjct: 282 NLSSLSRLGLRYNRLSAIPRSLA 304



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 199

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   ++LS+    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSKLSM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ +C   Q+   DL  N+
Sbjct: 247 HNQLEHLPKEIGNCT--QITNLDLQHNE 272


>gi|20071327|gb|AAH26364.1| Shoc2 protein [Mus musculus]
          Length = 524

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 160/344 (46%), Gaps = 62/344 (18%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NLP L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLPKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSK-------------------------------- 161
           G   +L+      N ++++P  LA CS                                 
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 162 ----------------MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
                           +  L++E N++  +   + +   +L++L    N L  +P   G+
Sbjct: 341 NCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT 400

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            + ++ L+L  N++  IP  +SG  SL    + NN L  LP  LG L KL  LDL  N+L
Sbjct: 401 WTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKL 460

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           +    E   L+ L  L L+NN LS LP  IG +T L  L L  N
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGEN 504



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 175/406 (43%), Gaps = 89/406 (21%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 -----------------------KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
                                  ++P EIG    L+  D + NQL+ LP  +G C  +++
Sbjct: 206 TVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKL-----------------------TVLSNN 178
               +N +  LP+ + + S +++L +  N+L                       + L  +
Sbjct: 266 LDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPES 325

Query: 179 LIASWTMLTELIASKNLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAE 234
           L++S   L  L  ++N     P  +G     S +  L++  NRI  IP  I S    L++
Sbjct: 326 LLSSLVKLNSLTLARNCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSK 383

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
             M +N L++LP + G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  
Sbjct: 384 LNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHG 443

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           +G +  LR+L L  N L +L         P  + YL+                DL     
Sbjct: 444 LGNLRKLRELDLEENKLESL---------PNEIAYLK----------------DL----- 473

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                 ++L L    LS +P  I     +T L L  N +  LP E+
Sbjct: 474 ------QKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 25/180 (13%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N L+ +P  IG L+ L  L L                       G N L+ LP E+G+
Sbjct: 479 TNNQLSTLPRGIGHLTNLTHLGL-----------------------GENLLTHLPEEIGR 515



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 14/197 (7%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +P S+     L E Y+ +N L +LPAE+G L  L TL L  N L    
Sbjct: 103 MRLDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L +L +LDL +N L  +P  + ++ +L  L L  N + T+   + N P  ++L  
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLSMLS- 221

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               + EN+  +      +L  + T        L +    L  +P EI    +IT LDL 
Sbjct: 222 ----IRENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCTQITNLDLQ 269

Query: 389 RNSIQELPPELSSCASL 405
            N + +LP  + + +SL
Sbjct: 270 HNDLLDLPDTIGNLSSL 286



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 13/124 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+   L  +P +V      +G        V L+ LIL++N ++KL   L NL  L  L
Sbjct: 407 LNLATNQLTKIPEDV------SG-------LVSLEVLILSNNLLKKLPHGLGNLRKLREL 453

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NKL  LP  I  L  L+ L ++ N +  +P  IG  T L       N L  LP  +
Sbjct: 454 DLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513

Query: 134 GRCL 137
           GR L
Sbjct: 514 GRNL 517


>gi|417765447|ref|ZP_12413409.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352384|gb|EJP04580.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 426

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 156/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N++ ++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 398 KLYLHNNPL 406



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 26/355 (7%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L TL  ++   
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENI--- 321

Query: 321 PTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                L+ L++  L  N+ +      E L  + +        L LE   L+A+P EI + 
Sbjct: 322 ---GQLQRLQTLYLGNNQLNFLPNKVEQLQNLES--------LDLEHNQLNALPKEIGKL 370

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKF-------SDLVTNKESCISGCYLYW 427
            ++  L+L  N +  LP E+    +L+  +       S+ +      +  C +Y+
Sbjct: 371 QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPLPSEKIERIRKLLPQCIIYF 425


>gi|341884210|gb|EGT40145.1| hypothetical protein CAEBREN_23247 [Caenorhabditis brenneri]
          Length = 559

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 199/403 (49%), Gaps = 38/403 (9%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L +  L +VP  +YK                L+ L L +N I  + E + NL  L +
Sbjct: 146 TLDLRHNKLTEVPPVIYK-------------ITSLETLWLRYNRIVAVDEQIGNLVKLKM 192

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+V  NK+ ELP+AIG+L  L    VS+N + ++P+EIG   +L + D   N L ELP S
Sbjct: 193 LDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECQSLTQLDLQHNDLSELPYS 252

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  +L       N I  +P +L +C ++ +  VE N L +L  NL+     +  +  S
Sbjct: 253 IGKLTSLVRIGIRYNKIRCIPSELENCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLS 312

Query: 193 KNLLNGMPETIGSLSRL---IRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAE 248
           +N L   P   G   +    + +++  N+I  IP  I S    L +  +  N L +LP +
Sbjct: 313 RNELTAFPA--GGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLD 370

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G  + +  L+L +NQLK    +  +L  L +L LSNN L  LP +IG +  LR+L L  
Sbjct: 371 MGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEE 430

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSLE 365
           N L T+ + +        L++L         ++       ++++   +    + ++L L 
Sbjct: 431 NELETVPTEI------GFLQHL---------TKLWVQSNKIVSLPRSIGNLCSLQDLRLG 475

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
             NL+AIP EI     +  L L+ N S+  LP EL+ C SL++
Sbjct: 476 ENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEI 518



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 143/293 (48%), Gaps = 27/293 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF--NS 102
            L++ I+  N+++ L  +L   LP +  +N+S N+L+  PA  G    + ++ ++   N 
Sbjct: 281 QLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAG-GPQQFVSTVTINMEHNQ 339

Query: 103 IMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           I KIP  I S AT L K +   N+L  LP  +G   ++++   S N +  LPED+     
Sbjct: 340 ISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVN 399

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L +  N+L  L N  I +   L EL   +N L  +P  IG L  L +L +  N+I+S
Sbjct: 400 LEILVLSNNQLKKLPNQ-IGNLKKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKIVS 458

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 281
           +P SI   CSL +  +G N L+A+P E+G L  L +L L+ N                  
Sbjct: 459 LPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDN------------------ 500

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
              +SL  LP E+    +L  + +  +PL  +   +  G    +++YL+ + P
Sbjct: 501 ---SSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 550


>gi|156120535|ref|NP_001095413.1| leucine-rich repeat protein SHOC-2 [Bos taurus]
 gi|426253112|ref|XP_004020244.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Ovis
           aries]
 gi|166977671|sp|A6QLV3.1|SHOC2_BOVIN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|151553933|gb|AAI48098.1| SHOC2 protein [Bos taurus]
 gi|296472607|tpg|DAA14722.1| TPA: leucine-rich repeat protein SHOC-2 [Bos taurus]
 gi|440906851|gb|ELR57068.1| Leucine-rich repeat protein SHOC-2 [Bos grunniens mutus]
          Length = 582

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 205/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            +++L +L L  N L  +  SL 
Sbjct: 282 NLSSLSRLGLRYNRLSAIPRSLA 304



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 199

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   ++LS+    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSKLSM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ +C   Q+   DL  N+
Sbjct: 247 HNQLEHLPKEIGNCT--QITNLDLQHNE 272


>gi|24215664|ref|NP_713145.1| hypothetical protein LA_2964 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074856|ref|YP_005989174.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196829|gb|AAN50163.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458646|gb|AER03191.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 426

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 156/309 (50%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            L+LS   L  +P E+   +N  +    +    A+        +LQ+L LAHN +  L E
Sbjct: 99  QLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPE 158

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  L + HN+ + +   IG+L  L+SL +  N +  +P EIG    L      
Sbjct: 159 DIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLD 218

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+  NL      NN +T+LP+++     + KL +  NKLT L    I  
Sbjct: 219 HNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE-IGQ 277

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L   +N L  +P+ IG L  L  LDL  N++ ++P +I     L   Y+GNN L
Sbjct: 278 LQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQL 337

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + LP ++ +L  L +LDL  NQL     E  +L +L  L+L  N L+ LP EI ++  L+
Sbjct: 338 NFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNLK 397

Query: 302 KLLLTGNPL 310
           KL L  NPL
Sbjct: 398 KLYLHNNPL 406



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 171/355 (48%), Gaps = 26/355 (7%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG+L  L+ L +S N +M +P+EIG    L K     NQL  +P  +G+  NL + 
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKL-TVLSNNLIASWTMLTELIASKNLLNGMPE 201
             ++N + +LPED+    ++  L +  N+  ++L    I     L  L    N LN +P+
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKE--IGQLQNLESLGLDHNQLNVLPK 204

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L  L  L L  N++  +P  I    +L   ++ NN L+ LP E+G+L  L  L L+
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N+L     E  QL+ L  L L  N L+ LP EIG++  L++L L GN L TL  ++   
Sbjct: 265 KNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENI--- 321

Query: 321 PTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                L+ L++  L  N+ +      E L  + +        L LE   L+A+P EI + 
Sbjct: 322 ---GQLQRLQTLYLGNNQLNFLPNKVEQLQNLES--------LDLEHNQLNALPKEIGKL 370

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKF-------SDLVTNKESCISGCYLYW 427
            ++  L+L  N +  LP E+    +L+  +       S+ +      +  C +Y+
Sbjct: 371 QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPLPSEKIERIRKLLPQCNIYF 425


>gi|379728469|ref|YP_005320665.1| putative lipoprotein [Saprospira grandis str. Lewin]
 gi|378574080|gb|AFC23081.1| putative lipoprotein [Saprospira grandis str. Lewin]
          Length = 484

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 183/356 (51%), Gaps = 25/356 (7%)

Query: 57  IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL 116
           +E+L E++  L  L VL ++   +  LPA+IG+L  L+ LD+    + ++P+ +G   AL
Sbjct: 94  LEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLRILDLGNCQLQQLPEGLGQLQAL 153

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
              + S+NQL+ELP S+G+   L     S+N +  LP + +  +++ +L +E N L+ L 
Sbjct: 154 EALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALENNLLSFLP 213

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           +N       L  L+ ++N L+ +P ++G L +L  L+L  N +  +P+ I    SL E  
Sbjct: 214 SN-FGGLVALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELD 272

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           + +N L  LP E+G+L  L +L +  N+L++   E  QL+ L  L L  N L+ LP   G
Sbjct: 273 LSDNFLQQLPPEIGQLQALKSLFITENELQQLPAEFAQLKNLQELQLQENKLTALPRNFG 332

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENE----DSEASTTKEDLIT 350
           K++ L +L L+ N L  L  S+        LK L S  L  NE       AS  K +LI 
Sbjct: 333 KLSQLEELQLSENKLEALPKSIKR------LKKLSSLNLSNNEIYLFPKNASGIK-NLIA 385

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                      L LEG  +  +P EI E   +  L L  N ++ LPP L   ++L+
Sbjct: 386 -----------LDLEGNYIEELPEEIQELQNLEFLILYDNELRNLPPYLQDLSALR 430



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 138/292 (47%), Gaps = 25/292 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +  +++L E L  L  L  LN+S N+L ELP +IG+L  LK  D+S N + +
Sbjct: 129 NLRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEELPPSIGQLQALKMADLSSNRLQE 188

Query: 106 IPDE-----------------------IGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +P+E                        G   AL     + NQL +LP+SLG+   L   
Sbjct: 189 LPNEFSQLTQLEELALENNLLSFLPSNFGGLVALKTLVLAENQLDQLPASLGQLKQLELL 248

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           +  +N +  LP  +     + +LD+  N L  L    I     L  L  ++N L  +P  
Sbjct: 249 ELQDNDLGQLPAQIGQLQSLVELDLSDNFLQQLPPE-IGQLQALKSLFITENELQQLPAE 307

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
              L  L  L L +N++ ++P +      L E  +  N L ALP  + +L KL +L+L +
Sbjct: 308 FAQLKNLQELQLQENKLTALPRNFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLSN 367

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N++  +   A  ++ L  LDL  N +  LP EI ++  L  L+L  N LR L
Sbjct: 368 NEIYLFPKNASGIKNLIALDLEGNYIEELPEEIQELQNLEFLILYDNELRNL 419



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 140/288 (48%), Gaps = 37/288 (12%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L+LA N +++L   L  L  L +L +  N L +LPA IG+L  L  LD+S N + 
Sbjct: 220 VALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSDNFLQ 279

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P EIG   AL     + N+L++LP+   +  NL + +   N +T+LP +    S++ +
Sbjct: 280 QLPPEIGQLQALKSLFITENELQQLPAEFAQLKNLQELQLQENKLTALPRNFGKLSQLEE 339

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  NKL  L                        P++I  L +L  L+L  N I   P 
Sbjct: 340 LQLSENKLEAL------------------------PKSIKRLKKLSSLNLSNNEIYLFPK 375

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLD 281
           + SG  +L    +  N +  LP E+ +L  L  L L+ N+L+    Y  +   LR   LD
Sbjct: 376 NASGIKNLIALDLEGNYIEELPEEIQELQNLEFLILYDNELRNLPPYLQDLSALR--RLD 433

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNP-----LRTLRSSLVN---GP 321
           +S+N     P  + +M  L+ L+L  +      ++TL++ L+N   GP
Sbjct: 434 ISDNEFEAFPEVLYQMRQLKDLILNVDQFEPTKIQTLKNRLLNCNIGP 481



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 155/339 (45%), Gaps = 20/339 (5%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDV-SFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
             L +   +LS LPA IG+   L+ L +    ++ ++P+EIG    L     +S  +K L
Sbjct: 61  QALVLEEEELSSLPATIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRL 120

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+S+G+  NL      N  +  LPE L     +  L++  N+L  L  + I     L   
Sbjct: 121 PASIGQLQNLRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEELPPS-IGQLQALKMA 179

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L  +P     L++L  L L  N +  +PS+  G  +L    +  N L  LPA L
Sbjct: 180 DLSSNRLQELPNEFSQLTQLEELALENNLLSFLPSNFGGLVALKTLVLAENQLDQLPASL 239

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L +L  L+L  N L +   +  QL+ L  LDLS+N L  LPPEIG++  L+ L +T N
Sbjct: 240 GQLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSDNFLQQLPPEIGQLQALKSLFITEN 299

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEG 366
            L+ L +        A LK L+         E    +  L  +       S+  EL L  
Sbjct: 300 ELQQLPAEF------AQLKNLQ---------ELQLQENKLTALPRNFGKLSQLEELQLSE 344

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             L A+P  I    +++ L+LS N I   P   S   +L
Sbjct: 345 NKLEALPKSIKRLKKLSSLNLSNNEIYLFPKNASGIKNL 383



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 124/262 (47%), Gaps = 21/262 (8%)

Query: 156 LADCSKMSKLDVEGNKLTVLSNNL------IASWTMLTEL-IASKNLLNGMPETIGSLSR 208
           L    +++ LD+    L +    L      I  ++ L  L +  +  L  +PE IG L  
Sbjct: 47  LLQAERLADLDISYQALVLEEEELSSLPATIGQYSELRYLSLWGQEALEELPEEIGQLQN 106

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L L+   I  +P+SI    +L    +GN  L  LP  LG+L  L  L+L +NQL+E 
Sbjct: 107 LEVLILNSTGIKRLPASIGQLQNLRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEEL 166

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                QL+ L + DLS+N L  LP E  ++T L +L L  N L  L S+   G   AL  
Sbjct: 167 PPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALENNLLSFLPSNF--GGLVALKT 224

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            +   L EN        + D +  +       + L L+  +L  +P++I +   + +LDL
Sbjct: 225 LV---LAEN--------QLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDL 273

Query: 388 SRNSIQELPPELSSCASLQVKF 409
           S N +Q+LPPE+    +L+  F
Sbjct: 274 SDNFLQQLPPEIGQLQALKSLF 295


>gi|40788390|dbj|BAA74885.2| KIAA0862 protein [Homo sapiens]
          Length = 584

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 205/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 176 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 222

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 223 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 282

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 283 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 342

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 343 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 400

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 401 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 460

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 461 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 507

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 508 LTHLPEEIGTLENLEELYLNDNPNLHSLPLELALCSKLSI 547



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 362 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 421

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 422 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 480

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 481 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELA 540

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 541 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 578

Query: 309 PLRTL 313
           P R +
Sbjct: 579 PYRAM 583



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 105 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 164

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 165 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS 223

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 224 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 283

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            +++L +L L  N L  +  SL 
Sbjct: 284 NLSSLSRLGLRYNRLSAIPRSLA 306



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 376 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 422

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 423 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 482

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 483 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLELALC 542

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 543 SKLSIMSIENCPLSHLPPQIVA 564



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 105 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVG------------------- 145

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 146 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 201

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   ++LS+    LS+    +  +P+EI E   +  LD++
Sbjct: 202 RFNRI---------TTVEKDIKNLSKLSM----LSIRENKIKQLPAEIGELCNLITLDVA 248

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ +C   Q+   DL  N+
Sbjct: 249 HNQLEHLPKEIGNCT--QITNLDLQHNE 274


>gi|398341355|ref|ZP_10526058.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 401

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 164/357 (45%), Gaps = 38/357 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L    ++ L +++  L  L VL +++N+L+ LP  IG+L  L+ L +S N + 
Sbjct: 46  LDVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P EIG    L     S N+L  LP  +G+  NL +   + N  T+ P+++     + +
Sbjct: 106 TFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQ 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+L  L N  I     L EL  S N L  +   IG L  L  LDL+ N++ ++P 
Sbjct: 166 LNLYANQLKTLPNE-IGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    + NN    +P E+G+L  L  LDL  NQ K    E  QL+ L +L L+
Sbjct: 225 EIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLN 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN    +P E G++  L+ L L  N L TL + +        LK LR             
Sbjct: 285 NNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQ------LKNLR------------- 325

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                            EL L    L  + +EI +   + KL L  N ++ LP E+ 
Sbjct: 326 -----------------ELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 162/336 (48%), Gaps = 38/336 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL+++  KL  LP  IG+L  L+ L+++ N +  +P EIG    L +   S NQL   P 
Sbjct: 50  VLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     S N +T+LP+++     + +L +  N+ T                  
Sbjct: 110 EIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFT------------------ 151

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L +L+L+ N++ ++P+ I    +L E ++  N L  L AE+G+
Sbjct: 152 ------AFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQ 205

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDL+ NQLK    E  QL+ L +LDL+NN    +P EIG++  L+ L L  N  
Sbjct: 206 LQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQF 265

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +T+   +        LK L+     N  ++  T  E+   +        + LSL    L+
Sbjct: 266 KTVPEEI------GQLKNLQMLFLNN--NQFKTVPEETGQLK-----NLQMLSLNANQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P+EI +   + +L LS N ++ L  E+    +L+
Sbjct: 313 TLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLK 348



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 136/306 (44%), Gaps = 38/306 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+N  L  +P E+              +  +LQ+L L+ N +    +++  L  L  L
Sbjct: 74  LELNNNQLATLPKEI-------------GQLQNLQELHLSGNQLTTFPKEIGQLKNLQTL 120

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +S N+L+ LP  IG+L  L+ L ++ N     P EIG    L + +  +NQLK LP+ +
Sbjct: 121 VLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEI 180

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL +   S N + +L  ++     +  LD+  N+L  L    I     L  L  + 
Sbjct: 181 GQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKE-IGQLKNLQMLDLNN 239

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N    +PE IG L  L  LDL  N+  ++P  I    +L   ++ NN    +P E G+L 
Sbjct: 240 NQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLK 299

Query: 254 KLGTLDLHSNQL-----------------------KEYCVEACQLR-LSVLDLSNNSLSG 289
            L  L L++NQL                       K    E  QL+ L  L L +N L  
Sbjct: 300 NLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLKT 359

Query: 290 LPPEIG 295
           LP EIG
Sbjct: 360 LPKEIG 365



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 128/290 (44%), Gaps = 38/290 (13%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D +  +LK LP  +G+  NL   + +NN + +LP+++     + +L + GN+LT     
Sbjct: 51  LDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKE 110

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I     L  L+ SKN L  +P+ IG L  L  L L+ N+  + P  I    +L +  + 
Sbjct: 111 -IGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLY 169

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
            N L  LP E+G+L  L  L L  NQLK    E  QL+ L VLDL++N L  LP EIG++
Sbjct: 170 ANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQL 229

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L L  N  +T+                    PE             I     L V
Sbjct: 230 KNLQMLDLNNNQFKTV--------------------PEE------------IGQLKNLQV 257

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
               L L       +P EI +   +  L L+ N  + +P E     +LQ+
Sbjct: 258 ----LDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQM 303



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 14/215 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL    L+ +PNE+              +  +L++L L++N ++ L  ++  L  L V
Sbjct: 165 QLNLYANQLKTLPNEI-------------GQLQNLRELHLSYNQLKTLSAEIGQLQNLQV 211

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+L  LP  IG+L  L+ LD++ N    +P+EIG    L   D   NQ K +P  
Sbjct: 212 LDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEE 271

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     +NN   ++PE+      +  L +  N+LT L N  I     L EL  S
Sbjct: 272 IGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNE-IRQLKNLRELHLS 330

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
            N L  +   IG L  L +L L  N++ ++P  I 
Sbjct: 331 YNQLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEIG 365


>gi|124007624|ref|ZP_01692328.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
 gi|123986922|gb|EAY26687.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
          Length = 440

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 151/308 (49%), Gaps = 27/308 (8%)

Query: 30  KNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVS------------- 76
           KN D     D+  + V LQ+L L++NNIE L + +R L  L  L++              
Sbjct: 74  KNLDRLP--DEVTQLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQGNELAQLPPIVEQ 131

Query: 77  ----------HNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
                     +N L++LP ++G L  LK L+V  N + ++P  IG  T+L+K + S NQL
Sbjct: 132 LTGLEELILGYNYLTQLPGSVGNLTQLKVLEVHNNDLFRLPSTIGKLTSLIKLNLSYNQL 191

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
            EL       +NL      +N ++ LP  +   + + KL + GN + VL  N I   T L
Sbjct: 192 SELSKMTENLVNLQQLNLQHNQLSQLPMAIGQLTALQKLVLSGNNMNVLPAN-IEQLTSL 250

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L    N L  +P TI  L  L  L L  N +  +P  I     L +  +  N L  LP
Sbjct: 251 KHLSLGGNTLEQLPPTICKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLELSYNELKELP 310

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           AE+G+L++L  L+L  N L +   E  QL  L  L +  N L+ +PP +G++T L++ +L
Sbjct: 311 AEIGQLTQLKQLNLGQNLLTKLPPEIGQLNCLENLWVYQNKLTNIPPTVGQLTALQRFML 370

Query: 306 TGNPLRTL 313
           + N L +L
Sbjct: 371 SNNQLTSL 378



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 139/262 (53%), Gaps = 23/262 (8%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           KL L++N + +L +   NL  L  LN+ HN+LS+LP AIG+L  L+ L +S N++  +P 
Sbjct: 183 KLNLSYNQLSELSKMTENLVNLQQLNLQHNQLSQLPMAIGQLTALQKLVLSGNNMNVLPA 242

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            I   T+L       N L++LP ++ +  +L++     N +  LP ++     + KL++ 
Sbjct: 243 NIEQLTSLKHLSLGGNTLEQLPPTICKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLELS 302

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+L  L    I   T L +L   +NLL  +P  IG L+ L  L ++QN++ +IP ++  
Sbjct: 303 YNELKELPAE-IGQLTQLKQLNLGQNLLTKLPPEIGQLNCLENLWVYQNKLTNIPPTVGQ 361

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 288
             +L  F + NN L++LP E+G LS                       LS L L NN L+
Sbjct: 362 LTALQRFMLSNNQLTSLPIEIGHLS----------------------HLSTLSLENNQLA 399

Query: 289 GLPPEIGKMTTLRKLLLTGNPL 310
            LP EI +++ L+ L LTGNP+
Sbjct: 400 TLPLEIKQLSKLKSLQLTGNPM 421



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 159/365 (43%), Gaps = 59/365 (16%)

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK------ 127
           ++S   L  LP  + +L  L+ LD+S N+I  +  +I     L K D   N+L       
Sbjct: 70  DLSDKNLDRLPDEVTQLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQGNELAQLPPIV 129

Query: 128 -----------------ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
                            +LP S+G    L   +  NN +  LP  +   + + KL++  N
Sbjct: 130 EQLTGLEELILGYNYLTQLPGSVGNLTQLKVLEVHNNDLFRLPSTIGKLTSLIKLNLSYN 189

Query: 171 KLTVLS----------------NNL------IASWTMLTELIASKNLLNGMPETIGSLSR 208
           +L+ LS                N L      I   T L +L+ S N +N +P  I  L+ 
Sbjct: 190 QLSELSKMTENLVNLQQLNLQHNQLSQLPMAIGQLTALQKLVLSGNNMNVLPANIEQLTS 249

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L L  N +  +P +I    SL E ++  N L  LP E+  L  L  L+L  N+LKE 
Sbjct: 250 LKHLSLGGNTLEQLPPTICKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLELSYNELKEL 309

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL +L  L+L  N L+ LPPEIG++  L  L +  N L  +  ++  G   AL +
Sbjct: 310 PAEIGQLTQLKQLNLGQNLLTKLPPEIGQLNCLENLWVYQNKLTNIPPTV--GQLTALQR 367

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
           ++ S    N+ +        L  ++T        LSLE   L+ +P EI +  ++  L L
Sbjct: 368 FMLSN---NQLTSLPIEIGHLSHLST--------LSLENNQLATLPLEIKQLSKLKSLQL 416

Query: 388 SRNSI 392
           + N +
Sbjct: 417 TGNPM 421



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 75/129 (58%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L +N +++L  +++ L  L  L +S+N+L ELPA IG+L  LK L++  N + K+
Sbjct: 273 LTELFLDYNYLQQLPIEIKYLKHLQKLELSYNELKELPAEIGQLTQLKQLNLGQNLLTKL 332

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L       N+L  +P ++G+   L  F  SNN +TSLP ++   S +S L 
Sbjct: 333 PPEIGQLNCLENLWVYQNKLTNIPPTVGQLTALQRFMLSNNQLTSLPIEIGHLSHLSTLS 392

Query: 167 VEGNKLTVL 175
           +E N+L  L
Sbjct: 393 LENNQLATL 401



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/124 (37%), Positives = 73/124 (58%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQKL L++N +++L  ++  L  L  LN+  N L++LP  IG+L+ L++L V  N +  I
Sbjct: 296 LQKLELSYNELKELPAEIGQLTQLKQLNLGQNLLTKLPPEIGQLNCLENLWVYQNKLTNI 355

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +G  TAL +F  S+NQL  LP  +G   +LS     NN + +LP ++   SK+  L 
Sbjct: 356 PPTVGQLTALQRFMLSNNQLTSLPIEIGHLSHLSTLSLENNQLATLPLEIKQLSKLKSLQ 415

Query: 167 VEGN 170
           + GN
Sbjct: 416 LTGN 419


>gi|418740905|ref|ZP_13297281.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410751500|gb|EKR08477.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 165/335 (49%), Gaps = 19/335 (5%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L +++  L  L VL +++N+L+ LP  IG+L  L+ L++  N + 
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+EIG          S N+L  LP  +G+  NL +   + N  T+ P+++     + +
Sbjct: 106 TLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQ 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+L  L N  I     L EL  S N L  +   IG L  L  LDL+ N++ ++P 
Sbjct: 166 LNLYANQLKTLPNE-IGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    + NN    +P E+G+L  L  LDL  NQ K    E  QL+ L +L L+
Sbjct: 225 EIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLFLN 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L  L  EIG++  L+ L L  N L TL + +        LK LR         E   
Sbjct: 285 NNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEIRQ------LKNLR---------ELHL 329

Query: 344 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEI 376
           +   L T++  +      K+LSL    L+ +P EI
Sbjct: 330 SYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 161/336 (47%), Gaps = 38/336 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG+L  L+ L+++ N +  +P EIG    L   +  +NQL  LP 
Sbjct: 50  VLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPE 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  N      S N +T+LP+++     + +L +  N+ T                  
Sbjct: 110 EIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFT------------------ 151

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L +L+L+ N++ ++P+ I    +L E ++  N L  L AE+G+
Sbjct: 152 ------AFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQ 205

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDL+ NQLK    E  QL+ L VLDL+NN    +P EIG++  L+ L L  N  
Sbjct: 206 LQNLQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQF 265

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +T+   +        LK L+     N   +  + +   I     L +    LSL    L+
Sbjct: 266 KTVSEEI------GQLKNLQMLFLNNNQLKTLSAE---IGQLKNLQM----LSLNANQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P+EI +   + +L LS N ++ L  E+    +L+
Sbjct: 313 TLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLK 348



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 124/292 (42%), Gaps = 61/292 (20%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S  +LK LP  +G+  NL   + +NN + +LP+++     +  L++  N+LT L   
Sbjct: 51  LDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTL--- 107

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                                PE IG L     L L +NR+ ++P  I    +L E Y+ 
Sbjct: 108 ---------------------PEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLN 146

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
            N  +A P E+G+L  L  L+L++NQLK    E  QL+ L  L LS N L  L  EIG++
Sbjct: 147 TNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQL 206

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L L  N L+TL         P  +  L++                       L V
Sbjct: 207 QNLQVLDLNDNQLKTL---------PKEIGQLKN-----------------------LQV 234

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
               L L       +P EI +   +  LDL  N  + +  E+    +LQ+ F
Sbjct: 235 ----LDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLF 282



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 14/214 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL    L+ +PNE+              +  +L++L L++N ++ L  ++  L  L V
Sbjct: 165 QLNLYANQLKTLPNEI-------------GQLQNLRELHLSYNQLKTLSAEIGQLQNLQV 211

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+L  LP  IG+L  L+ LD++ N    +P+EIG    L   D   NQ K +   
Sbjct: 212 LDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEE 271

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     +NN + +L  ++     +  L +  N+LT L N  I     L EL  S
Sbjct: 272 IGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNE-IRQLKNLRELHLS 330

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
            N L  +   IG L  L +L L  N++ ++P  I
Sbjct: 331 YNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364


>gi|421129189|ref|ZP_15589392.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359579|gb|EKP06671.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 400

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 161/336 (47%), Gaps = 38/336 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG+L  L+ L+++ N +  +P EIG    L +   S NQL   P 
Sbjct: 50  VLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL     S N +T+LP++                        I     L EL  
Sbjct: 110 EIGQLKNLQTLVLSKNRLTTLPKE------------------------IGQLKNLRELYL 145

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           + N L  +P+ IG L  L +L+L+ N++ ++P  I    +L E ++  N L  L AE+G+
Sbjct: 146 NTNQLKTLPKEIGQLKNLQQLNLYANQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQ 205

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDL+ NQLK    E  QL+ L +LDL+NN    +P EIG++  L+ L L  N  
Sbjct: 206 LQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQF 265

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +T+   +        LK L+     N  ++  T  E+   +        + LSL    L+
Sbjct: 266 KTVPEEI------GQLKNLQMLFLNN--NQFKTVPEETGQLK-----NLQMLSLNANQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P+EI +   + +L LS N ++ L  E+    +L+
Sbjct: 313 TLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLK 348



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 163/335 (48%), Gaps = 19/335 (5%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   ++ L +++  L  L VL +++N+L+ LP  IG+L  L+ L +S N + 
Sbjct: 46  LDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P EIG    L     S N+L  LP  +G+  NL +   + N + +LP+++     + +
Sbjct: 106 TFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKNLQQ 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+L  L    I     L EL  S N L  +   IG L  L  LDL+ N++ ++P 
Sbjct: 166 LNLYANQLKTLPKE-IGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPK 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    + NN    +P E+G+L  L  LDL  NQ K    E  QL+ L +L L+
Sbjct: 225 EIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLN 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN    +P E G++  L+ L L  N L TL + +        LK LR         E   
Sbjct: 285 NNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQ------LKNLR---------ELHL 329

Query: 344 TKEDLITMATRLSVTS--KELSLEGMNLSAIPSEI 376
           +   L T++  +      K+LSL    L+ +P EI
Sbjct: 330 SYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 152/311 (48%), Gaps = 12/311 (3%)

Query: 14  LNLSNRSLRDVPNEVYK----------NFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+ +          N   A    +  +  +LQ+L L+ N +    ++
Sbjct: 51  LDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +S N+L+ LP  IG+L  L+ L ++ N +  +P EIG    L + +  +
Sbjct: 111 IGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKNLQQLNLYA 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQLK LP  +G+  NL +   S N + +L  ++     +  LD+  N+L  L    I   
Sbjct: 171 NQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKE-IGQL 229

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  + N    +PE IG L  L  LDL  N+  ++P  I    +L   ++ NN   
Sbjct: 230 KNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFK 289

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            +P E G+L  L  L L++NQL     E  QL+ L  L LS N L  L  EIG++  L+K
Sbjct: 290 TVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKK 349

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 350 LSLRDNQLTTL 360



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 130/290 (44%), Gaps = 38/290 (13%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S  +LK LP  +G+  NL   + +NN + +LP+++     + +L + GN+LT     
Sbjct: 51  LDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKE 110

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I     L  L+ SKN L  +P+ IG L  L  L L+ N++ ++P  I    +L +  + 
Sbjct: 111 -IGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKNLQQLNLY 169

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
            N L  LP E+G+L  L  L L  NQLK    E  QL+ L VLDL++N L  LP EIG++
Sbjct: 170 ANQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQL 229

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L L  N  +T+                    PE             I     L V
Sbjct: 230 KNLQMLDLNNNQFKTV--------------------PEE------------IGQLKNLQV 257

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
               L L       +P EI +   +  L L+ N  + +P E     +LQ+
Sbjct: 258 ----LDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQM 303



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 14/214 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL    L+ +P E+              +  +L++L L++N ++ L  ++  L  L V
Sbjct: 165 QLNLYANQLKTLPKEI-------------GQLQNLRELHLSYNQLKTLSAEIGQLQNLQV 211

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+L  LP  IG+L  L+ LD++ N    +P+EIG    L   D   NQ K +P  
Sbjct: 212 LDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEE 271

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     +NN   ++PE+      +  L +  N+LT L N  I     L EL  S
Sbjct: 272 IGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNE-IRQLKNLRELHLS 330

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
            N L  +   IG L  L +L L  N++ ++P  I
Sbjct: 331 YNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364


>gi|432905687|ref|XP_004077467.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Oryzias
           latipes]
          Length = 724

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 166/362 (45%), Gaps = 60/362 (16%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D I +  R+   L L    +R +P E++             + + L+KL L+ N I+ L 
Sbjct: 29  DEIFRYGRSLEELQLDANQIRQLPKELF-------------QLLKLRKLTLSDNEIQVLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN-------------------- 101
            ++ NL LL  L+VS N + E+P +I     L+  D S N                    
Sbjct: 76  PEIANLMLLVDLDVSRNDVYEIPESISHCKALQVADFSGNPLTRLPATFPDLQSLVCLSI 135

Query: 102 ---SIMKIPDEIGSA------TALVKF--------------DCSSNQLKELPSSLGRCLN 138
              S+ ++PD+ G +      T+L  F              D  SN+L+ELP S+G   N
Sbjct: 136 NDISLQRLPDDFGKSPSCCIPTSLASFIYSSLSELHKLEGLDLGSNELEELPKSIGNLSN 195

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           L +     N +  LP  L     +  LDV  NKL  L   L      LT+L+ S+N +  
Sbjct: 196 LKELWLDGNQLVELPATLCRIRNLVCLDVSENKLEGLPQEL-GGLENLTDLLVSQNSIEA 254

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +PE+IG L +L  L + QNR+  +P SI  C SLAE  +  N + +LP  +GKL KL  L
Sbjct: 255 LPESIGKLQKLSILKVDQNRLNCLPESIGSCESLAELILTENQIKSLPRSIGKLKKLFNL 314

Query: 259 DLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           +   NQL     E   C   L+V  + +N L+ +P E+ + T L  L ++GN L  L  S
Sbjct: 315 NCDRNQLTSLPKEIGGC-CSLNVFCMRDNRLTRIPAELSQATELHVLDVSGNRLAYLPLS 373

Query: 317 LV 318
           L 
Sbjct: 374 LT 375



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 121/214 (56%), Gaps = 1/214 (0%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L ELP +IG L  LK L +  N ++++P  +     LV  D S N+L+ LP  
Sbjct: 176 LDLGSNELEELPKSIGNLSNLKELWLDGNQLVELPATLCRIRNLVCLDVSENKLEGLPQE 235

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           LG   NL+D   S N I +LPE +    K+S L V+ N+L  L  + I S   L ELI +
Sbjct: 236 LGGLENLTDLLVSQNSIEALPESIGKLQKLSILKVDQNRLNCLPES-IGSCESLAELILT 294

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +N +  +P +IG L +L  L+  +N++ S+P  I GCCSL  F M +N L+ +PAEL + 
Sbjct: 295 ENQIKSLPRSIGKLKKLFNLNCDRNQLTSLPKEIGGCCSLNVFCMRDNRLTRIPAELSQA 354

Query: 253 SKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
           ++L  LD+  N+L    +    L+L  L LS N 
Sbjct: 355 TELHVLDVSGNRLAYLPLSLTTLQLKALWLSENQ 388



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 191/415 (46%), Gaps = 71/415 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           ++  +RSL  VP+E+++                L++L L  N I +L ++L  L  L  L
Sbjct: 17  IDYRHRSLLYVPDEIFRY------------GRSLEELQLDANQIRQLPKELFQLLKLRKL 64

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +S N++  LP  I  L +L  LDVS N + +IP+ I    AL   D S N L  LP++ 
Sbjct: 65  TLSDNEIQVLPPEIANLMLLVDLDVSRNDVYEIPESISHCKALQVADFSGNPLTRLPATF 124

Query: 134 GR-----CLNLSDF----------KASNNCI-TSLPE----DLADCSKMSKLDVEGNKLT 173
                  CL+++D           K+ + CI TSL       L++  K+  LD+  N+L 
Sbjct: 125 PDLQSLVCLSINDISLQRLPDDFGKSPSCCIPTSLASFIYSSLSELHKLEGLDLGSNELE 184

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L  + I + + L EL    N L  +P T+  +  L+ LD+ +N++  +P  + G  +L 
Sbjct: 185 ELPKS-IGNLSNLKELWLDGNQLVELPATLCRIRNLVCLDVSENKLEGLPQELGGLENLT 243

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 293
           +  +  N++ ALP  +GKL KL                      S+L +  N L+ LP  
Sbjct: 244 DLLVSQNSIEALPESIGKLQKL----------------------SILKVDQNRLNCLPES 281

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           IG   +L +L+LT N +++L         P  +  L+     N D    T+    I    
Sbjct: 282 IGSCESLAELILTENQIKSL---------PRSIGKLKKLFNLNCDRNQLTSLPKEIGGCC 332

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
            L+V      +    L+ IP+E+ +A E+  LD+S N +  LP  L+   +LQ+K
Sbjct: 333 SLNV----FCMRDNRLTRIPAELSQATELHVLDVSGNRLAYLPLSLT---TLQLK 380


>gi|124003508|ref|ZP_01688357.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991077|gb|EAY30529.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 646

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 145/269 (53%), Gaps = 9/269 (3%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L+   NNI +LK        LT+LN+  N L++LP +IG+L  L+ LD+  N +  +P  
Sbjct: 212 LVALPNNIGQLKN-------LTILNLRENYLTKLPTSIGQLKSLEKLDLQGNQLTILPIS 264

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           IG   +L K D  +NQL  LP+S+G+  NL       N +TSL +D+    ++  L++  
Sbjct: 265 IGQLKSLKKLDLGANQLTTLPTSIGQLKNLQQLFLEVNTLTSLLDDIGKLKQLKVLNLRR 324

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+LT L N+ I     L  L  S N L  +P++ G L +L  L+L  N   ++ + +   
Sbjct: 325 NRLTTLPNS-IGRLKSLRWLSLSSNKLTRLPKSFGQLKKLEELNLEGNYFQTMLTILGQL 383

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            SL + Y+ +N L+ LP  +G+L +L  L L  N+L        QL+ L  LDL  N LS
Sbjct: 384 KSLKKLYLASNNLTTLPENIGQLPELQYLTLVRNKLDRLPESIGQLQELQYLDLRRNRLS 443

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            LP  +G++  L +L +  NPL TL +S+
Sbjct: 444 TLPESLGQLKKLEELNIGANPLVTLPNSI 472



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 203/444 (45%), Gaps = 70/444 (15%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+VY +  EA    K  E V   KL L HN +  L  ++  L  L  LN+ +N+L+ LPA
Sbjct: 23  NKVYMSLTEAL---KTPEQV--YKLNLEHNQLTTLPANIGELKNLKKLNLEYNQLTTLPA 77

Query: 86  AIGELHMLKSLDVSFN------------------------SIMKIPDEIGSATALVKFDC 121
           +  +L  L+ L+++ N                        S+ K+PD I     L K + 
Sbjct: 78  SFAKLQNLEELNLTRNKFTTLPASVTKLQNLEELNLTDNLSLKKLPDNIEQLKNLQKLNL 137

Query: 122 SSN-QLKELPSSLG-----RCLNLSD------------------FKASNNCITSLPEDLA 157
           +SN  LK+LP ++      + LNL+                      +++ +T+LPE+ +
Sbjct: 138 TSNLSLKKLPENITQLKKLKVLNLNGSSRIILPANIQLPESLRILHMNDHLLTTLPENFS 197

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
               +  L+++ + L  L NN I     LT L   +N L  +P +IG L  L +LDL  N
Sbjct: 198 QLHNLKVLNLKSSGLVALPNN-IGQLKNLTILNLRENYLTKLPTSIGQLKSLEKLDLQGN 256

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++  +P SI    SL +  +G N L+ LP  +G+L  L  L L  N L     +  +L+ 
Sbjct: 257 QLTILPISIGQLKSLKKLDLGANQLTTLPTSIGQLKNLQQLFLEVNTLTSLLDDIGKLKQ 316

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L VL+L  N L+ LP  IG++ +LR L L+ N L  L  S         LK L       
Sbjct: 317 LKVLNLRRNRLTTLPNSIGRLKSLRWLSLSSNKLTRLPKSF------GQLKKLE------ 364

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           E +      + ++T+  +L  + K+L L   NL+ +P  I +  E+  L L RN +  LP
Sbjct: 365 ELNLEGNYFQTMLTILGQLK-SLKKLYLASNNLTTLPENIGQLPELQYLTLVRNKLDRLP 423

Query: 397 PELSSCASLQVKFSDLVTNKESCI 420
             +     LQ  + DL  N+ S +
Sbjct: 424 ESIGQLQELQ--YLDLRRNRLSTL 445



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 176/375 (46%), Gaps = 49/375 (13%)

Query: 39  DKWWEAVDLQKLILAHN-NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           D   +  +LQKL L  N +++KL E++  L  L VLN++ +    LPA I     L+ L 
Sbjct: 124 DNIEQLKNLQKLNLTSNLSLKKLPENITQLKKLKVLNLNGSSRIILPANIQLPESLRILH 183

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           ++ + +  +P+       L   +  S+ L  LP+++G+  NL+      N +T LP  + 
Sbjct: 184 MNDHLLTTLPENFSQLHNLKVLNLKSSGLVALPNNIGQLKNLTILNLRENYLTKLPTSIG 243

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
               + KLD++GN+LT+L                        P +IG L  L +LDL  N
Sbjct: 244 QLKSLEKLDLQGNQLTIL------------------------PISIGQLKSLKKLDLGAN 279

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++ ++P+SI    +L + ++  N L++L  ++GKL +L  L+L  N+L        +L+ 
Sbjct: 280 QLTTLPTSIGQLKNLQQLFLEVNTLTSLLDDIGKLKQLKVLNLRRNRLTTLPNSIGRLKS 339

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSR--- 332
           L  L LS+N L+ LP   G++  L +L L GN  +T+ + L  G   +L K YL S    
Sbjct: 340 LRWLSLSSNKLTRLPKSFGQLKKLEELNLEGNYFQTMLTIL--GQLKSLKKLYLASNNLT 397

Query: 333 -LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            LPEN            I     L      L+L    L  +P  I +  E+  LDL RN 
Sbjct: 398 TLPEN------------IGQLPELQY----LTLVRNKLDRLPESIGQLQELQYLDLRRNR 441

Query: 392 IQELPPELSSCASLQ 406
           +  LP  L     L+
Sbjct: 442 LSTLPESLGQLKKLE 456



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 146/297 (49%), Gaps = 26/297 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +D+  L  L VLN+  N+L+ LP +IG L  L+ L +S N + +
Sbjct: 293 NLQQLFLEVNTLTSLLDDIGKLKQLKVLNLRRNRLTTLPNSIGRLKSLRWLSLSSNKLTR 352

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P   G    L + +   N  + + + LG+  +L     ++N +T+LPE++    ++  L
Sbjct: 353 LPKSFGQLKKLEELNLEGNYFQTMLTILGQLKSLKKLYLASNNLTTLPENIGQLPELQYL 412

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP-- 223
            +  NKL  L  + I     L  L   +N L+ +PE++G L +L  L++  N ++++P  
Sbjct: 413 TLVRNKLDRLPES-IGQLQELQYLDLRRNRLSTLPESLGQLKKLEELNIGANPLVTLPNS 471

Query: 224 ----------------------SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
                                 +SI+   SL E Y+  N L  LP  + KL  L  L+L 
Sbjct: 472 IGKLKNLKKLYLATANQTPKSFASITQITSLEELYLLVNRLDTLPTSIQKLKNLKKLNLL 531

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            NQ+        +L+ L  L L NN L+ L   IG++ ++ +L L+ N L TL  S+
Sbjct: 532 YNQISIVPESIGKLKNLQALILGNNKLTVLTQNIGQLESILRLDLSSNKLTTLPQSI 588



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 130/271 (47%), Gaps = 1/271 (0%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           + +   L++L L  N  + +   L  L  L  L ++ N L+ LP  IG+L  L+ L +  
Sbjct: 357 FGQLKKLEELNLEGNYFQTMLTILGQLKSLKKLYLASNNLTTLPENIGQLPELQYLTLVR 416

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + ++P+ IG    L   D   N+L  LP SLG+   L +     N + +LP  +    
Sbjct: 417 NKLDRLPESIGQLQELQYLDLRRNRLSTLPESLGQLKKLEELNIGANPLVTLPNSIGKLK 476

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            + KL +     T  S   I   T L EL    N L+ +P +I  L  L +L+L  N+I 
Sbjct: 477 NLKKLYLATANQTPKSFASITQITSLEELYLLVNRLDTLPTSIQKLKNLKKLNLLYNQIS 536

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSV 279
            +P SI    +L    +GNN L+ L   +G+L  +  LDL SN+L           +L  
Sbjct: 537 IVPESIGKLKNLQALILGNNKLTVLTQNIGQLESILRLDLSSNKLTTLPQSIGKLKKLKQ 596

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L+LS N+L  LP  IG++  L+ L L  NP+
Sbjct: 597 LNLSYNNLKSLPEHIGQLKNLKDLNLRKNPI 627



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 25/227 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +++L E +  L  L  L++  N+LS LP ++G+L  L+ L++  N ++ 
Sbjct: 408 ELQYLTLVRNKLDRLPESIGQLQELQYLDLRRNRLSTLPESLGQLKKLEELNIGANPLVT 467

Query: 106 IPDEIG------------------------SATALVKFDCSSNQLKELPSSLGRCLNLSD 141
           +P+ IG                          T+L +     N+L  LP+S+ +  NL  
Sbjct: 468 LPNSIGKLKNLKKLYLATANQTPKSFASITQITSLEELYLLVNRLDTLPTSIQKLKNLKK 527

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
                N I+ +PE +     +  L +  NKLTVL+ N I     +  L  S N L  +P+
Sbjct: 528 LNLLYNQISIVPESIGKLKNLQALILGNNKLTVLTQN-IGQLESILRLDLSSNKLTTLPQ 586

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           +IG L +L +L+L  N + S+P  I    +L +  +  N +SA   E
Sbjct: 587 SIGKLKKLKQLNLSYNNLKSLPEHIGQLKNLKDLNLRKNPISATEKE 633



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 73/141 (51%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +   L++L L  N ++ L   ++ L  L  LN+ +N++S +P +IG+L  L++L +  N 
Sbjct: 498 QITSLEELYLLVNRLDTLPTSIQKLKNLKKLNLLYNQISIVPESIGKLKNLQALILGNNK 557

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +   IG   ++++ D SSN+L  LP S+G+   L     S N + SLPE +     +
Sbjct: 558 LTVLTQNIGQLESILRLDLSSNKLTTLPQSIGKLKKLKQLNLSYNNLKSLPEHIGQLKNL 617

Query: 163 SKLDVEGNKLTVLSNNLIASW 183
             L++  N ++      I  W
Sbjct: 618 KDLNLRKNPISATEKEKIKKW 638


>gi|307187771|gb|EFN72743.1| Leucine-rich repeat-containing protein 40 [Camponotus floridanus]
          Length = 604

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 204/453 (45%), Gaps = 81/453 (17%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK--------------NFDEAGEGDKWWEAVDLQK 49
           I+  AR +G LNLS++ L  VP++V+                 D   + ++WWE   L+ 
Sbjct: 30  IIIRARKTGQLNLSSKGLSTVPDQVWNINELTEEELRDLHFELDYEHKEERWWEQEPLKT 89

Query: 50  LILAHNNIEKLKEDLR-----------------------NLPLLTVLNVSHNKLSELPAA 86
           L L+ N++  + + ++                       +L  L ++N+S NKL  LP  
Sbjct: 90  LDLSSNSLITIDDKIQFLTELSNLNLQNNLLEELPPEVGSLHKLKIINLSDNKLENLPPQ 149

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
              L  L  L +  N +  +  EIG+   L   D S N L +LP  +G  + L     S 
Sbjct: 150 FYMLEELHELYLKNNHLNMLESEIGNLIMLTCMDLSYNNLNKLPIGMGYLVRLVTLNLSY 209

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N I  LP D+     +  LDV  N+L VL                           +G L
Sbjct: 210 NMIKELPPDMTSMRSLRILDVSFNQLEVLP-------------------------PLGEL 244

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQL 265
            +  ++    N +   P  ISGC +L   ++ NN +  + ++ L     L  L L +N++
Sbjct: 245 RKAEKIMFQSNNLKKFP-DISGCSALTVLHLDNNNIPEIDSQCLETAGHLKKLTLQNNKI 303

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
           +    E  +L  L V DLS+N++S +P  IG +  L++ ++ GN ++ +R+ ++   TP 
Sbjct: 304 EVIPEEIIKLINLEVFDLSHNNISLIPFCIGILPNLKQFVIKGNNIKNIRADIIRCGTPR 363

Query: 325 LLKYLRSRLPENEDSEASTTKEDL---ITMATR------LSVTSKELSLEGMNLSAIPSE 375
           +L ++R    +  DS +  T+E L   I+++ R      +   +K LSL G NL  +P E
Sbjct: 364 ILTHIR----QITDSTSVNTRELLQSSISVSVRCYPDKYMMKNTKLLSLAGQNLLDLPEE 419

Query: 376 IWE---AGEITKLDLSRNSIQELPPELSSCASL 405
           + E      +T +DLSRN + EL  ++S   S+
Sbjct: 420 VLENAVEASVTTIDLSRNKLSELSDKMSIVISV 452



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 163/316 (51%), Gaps = 25/316 (7%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           A  L+KL L +N IE + E++  L  L V ++SHN +S +P  IG L  LK   +  N+I
Sbjct: 290 AGHLKKLTLQNNKIEVIPEEIIKLINLEVFDLSHNNISLIPFCIGILPNLKQFVIKGNNI 349

Query: 104 MKIPDEI---GSATALVKF----DCSSNQLKEL-PSSLG---RCL-------NLSDFKAS 145
             I  +I   G+   L       D +S   +EL  SS+    RC        N      +
Sbjct: 350 KNIRADIIRCGTPRILTHIRQITDSTSVNTRELLQSSISVSVRCYPDKYMMKNTKLLSLA 409

Query: 146 NNCITSLPEDL---ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              +  LPE++   A  + ++ +D+  NKL+ LS+ +    +++ +L  + N L  +PE 
Sbjct: 410 GQNLLDLPEEVLENAVEASVTTIDLSRNKLSELSDKMSIVISVM-DLKLTSNHLTHLPEW 468

Query: 203 IGSLSRLIR-LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
           IG   + ++ LD+ +N + S+P SIS    L +  +  N  + +P  +  +  L +L  +
Sbjct: 469 IGEKYKYLQILDISKNYLKSLPLSISCLKYLRDVDLSFNRFTEIPEAIYDVISLESLIAN 528

Query: 262 SNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            N +    V A +   +L+VL+LSNN+++ +PPE+G +  LR L L+GN  +  R +++ 
Sbjct: 529 DNVIAAIDVSALEKLKKLAVLNLSNNNIAHVPPELGNLKNLRNLSLSGNCFKYPRQAILM 588

Query: 320 GPTPALLKYLRSRLPE 335
             T  +L YLR+ +P+
Sbjct: 589 KETEEILSYLRNLIPQ 604



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 114/464 (24%), Positives = 206/464 (44%), Gaps = 100/464 (21%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           +NLS+  L ++P + Y                +L +L L +N++  L+ ++ NL +LT +
Sbjct: 136 INLSDNKLENLPPQFYM-------------LEELHELYLKNNHLNMLESEIGNLIMLTCM 182

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S+N L++LP  +G L  L +L++S+N I ++P ++ S  +L   D S NQL+ LP  L
Sbjct: 183 DLSYNNLNKLPIGMGYLVRLVTLNLSYNMIKELPPDMTSMRSLRILDVSFNQLEVLPP-L 241

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G           +N +   P D++ CS ++ L ++ N +  + +  + +   L +L    
Sbjct: 242 GELRKAEKIMFQSNNLKKFP-DISGCSALTVLHLDNNNIPEIDSQCLETAGHLKKLTLQN 300

Query: 194 NLLNGMPETIGSLSRLIRLDLHQ-----------------------NRILSIPSSISGC- 229
           N +  +PE I  L  L   DL                         N I +I + I  C 
Sbjct: 301 NKIEVIPEEIIKLINLEVFDLSHNNISLIPFCIGILPNLKQFVIKGNNIKNIRADIIRCG 360

Query: 230 --------------------------------CSLAEFYMGNNALSAL--------PAEL 249
                                           C   ++ M N  L +L        P E+
Sbjct: 361 TPRILTHIRQITDSTSVNTRELLQSSISVSVRCYPDKYMMKNTKLLSLAGQNLLDLPEEV 420

Query: 250 ---GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL--SNNSLSGLPPEIG-KMTTLRKL 303
                 + + T+DL  N+L E   +   + +SV+DL  ++N L+ LP  IG K   L+ L
Sbjct: 421 LENAVEASVTTIDLSRNKLSELS-DKMSIVISVMDLKLTSNHLTHLPEWIGEKYKYLQIL 479

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKEL 362
            ++ N L++L  S+      + LKYLR   L  N  +E      D+I++    S+ + + 
Sbjct: 480 DISKNYLKSLPLSI------SCLKYLRDVDLSFNRFTEIPEAIYDVISLE---SLIANDN 530

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  +++SA+     +  ++  L+LS N+I  +PPEL +  +L+
Sbjct: 531 VIAAIDVSALE----KLKKLAVLNLSNNNIAHVPPELGNLKNLR 570



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 36/132 (27%)

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           +L +++LS+N L  LPP+   +  L +L L  N L  L S + N                
Sbjct: 132 KLKIINLSDNKLENLPPQFYMLEELHELYLKNNHLNMLESEIGN---------------- 175

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
                       LI +          + L   NL+ +P  +     +  L+LS N I+EL
Sbjct: 176 ------------LIMLTC--------MDLSYNNLNKLPIGMGYLVRLVTLNLSYNMIKEL 215

Query: 396 PPELSSCASLQV 407
           PP+++S  SL++
Sbjct: 216 PPDMTSMRSLRI 227


>gi|119569935|gb|EAW49550.1| soc-2 suppressor of clear homolog (C. elegans), isoform CRA_c [Homo
           sapiens]
          Length = 434

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 205/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 26  LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 72

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 73  SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 132

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 133 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 192

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 193 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 250

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 251 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 310

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 311 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 357

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 358 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 397



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 212 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 271

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 272 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 330

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 331 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 390

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 391 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 428

Query: 309 PLRTL 313
           P R +
Sbjct: 429 PYRAM 433



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 226 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 272

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 273 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 332

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 333 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 392

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 393 SKLSIMSIENCPLSHLPPQIVA 414


>gi|418743909|ref|ZP_13300268.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410795304|gb|EKR93201.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 360

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 151/296 (51%), Gaps = 15/296 (5%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           ++Y++  EA     + +  D+  L L++  I+ L   + NL  L  L++ +N+L+ LP  
Sbjct: 32  KIYRDLREA-----FQKPSDVHILYLSNQEIKSLPRQIANLKNLRKLDLRYNQLTTLPKE 86

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG+LH L+SL +  NS+  +P+EIG    L +   S N L  LP ++GR  NL     S 
Sbjct: 87  IGQLHNLQSLCLLGNSLSTLPEEIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSV 146

Query: 147 NCIT--------SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           N  +         + E++ D   + +L++ GN+LT+L    I     L +L  S+N L  
Sbjct: 147 NLRSLIFRSEEIGISEEIGDLQNLKELNLTGNRLTMLPKE-IGKLQSLEKLDLSENSLAI 205

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P+ IG L  L RL L  NR+ + P  I    +L E  +  N L+ LP E+ +   L  L
Sbjct: 206 LPKEIGRLQNLKRLSLKGNRLTTFPKEIGKLQNLEELDLSENLLAILPKEISRFQNLREL 265

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L  N+L     E  +L+ L  L L  N L+ LP EIGK   L +L L GN L TL
Sbjct: 266 SLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLEGNRLTTL 321



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 9/237 (3%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLS--------ELPAAIGELHMLKSLD 97
           +L++L L+HN +  L E++  L  L VL++S N  S         +   IG+L  LK L+
Sbjct: 115 NLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQNLKELN 174

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           ++ N +  +P EIG   +L K D S N L  LP  +GR  NL       N +T+ P+++ 
Sbjct: 175 LTGNRLTMLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTTFPKEIG 234

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
               + +LD+  N L +L    I+ +  L EL    N L+ +P+ IG L  L  L L  N
Sbjct: 235 KLQNLEELDLSENLLAILPKE-ISRFQNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGN 293

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           R+ ++P  I    +L E  +  N L+ LP E+GKL  L +L+L  N L  Y  +  Q
Sbjct: 294 RLTTLPKEIGKFQNLIELRLEGNRLTTLPKEIGKLQCLWSLNLSKNPLSVYEKKRIQ 350



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 122/292 (41%), Gaps = 44/292 (15%)

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S+ ++K LP  +    NL       N +T+LP+++     +  L + GN L+ L    I 
Sbjct: 53  SNQEIKSLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLCLLGNSLSTLPEE-IG 111

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN--------RILSIPSSISGCCSLA 233
               L EL  S NLL  +PE IG L  L  LDL  N          + I   I    +L 
Sbjct: 112 HLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQNLK 171

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 293
           E  +  N L+ LP E+GKL  L                        LDLS NSL+ LP E
Sbjct: 172 ELNLTGNRLTMLPKEIGKLQSL----------------------EKLDLSENSLAILPKE 209

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           IG++  L++L L GN L T    +              +L   E+ + S     ++    
Sbjct: 210 IGRLQNLKRLSLKGNRLTTFPKEI-------------GKLQNLEELDLSENLLAILPKEI 256

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                 +ELSLEG  LS +P EI     + +L L  N +  LP E+    +L
Sbjct: 257 SRFQNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKEIGKFQNL 308



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 93/185 (50%), Gaps = 1/185 (0%)

Query: 33  DEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHM 92
           +E G  ++  +  +L++L L  N +  L +++  L  L  L++S N L+ LP  IG L  
Sbjct: 156 EEIGISEEIGDLQNLKELNLTGNRLTMLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQN 215

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           LK L +  N +   P EIG    L + D S N L  LP  + R  NL +     N +++L
Sbjct: 216 LKRLSLKGNRLTTFPKEIGKLQNLEELDLSENLLAILPKEISRFQNLRELSLEGNRLSTL 275

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + +L + GN+LT L    I  +  L EL    N L  +P+ IG L  L  L
Sbjct: 276 PKEIGRLKNLKELSLGGNRLTTLPKE-IGKFQNLIELRLEGNRLTTLPKEIGKLQCLWSL 334

Query: 213 DLHQN 217
           +L +N
Sbjct: 335 NLSKN 339



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 13/162 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+   L  +P E+ K                L+KL L+ N++  L +++  L  L  L
Sbjct: 173 LNLTGNRLTMLPKEIGK-------------LQSLEKLDLSENSLAILPKEIGRLQNLKRL 219

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  P  IG+L  L+ LD+S N +  +P EI     L +     N+L  LP  +
Sbjct: 220 SLKGNRLTTFPKEIGKLQNLEELDLSENLLAILPKEISRFQNLRELSLEGNRLSTLPKEI 279

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           GR  NL +     N +T+LP+++     + +L +EGN+LT L
Sbjct: 280 GRLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLEGNRLTTL 321



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 108/227 (47%), Gaps = 22/227 (9%)

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S   +  +P  I +L  L +LDL  N++ ++P  I    +L    +  N+LS LP E
Sbjct: 50  LYLSNQEIKSLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLCLLGNSLSTLPEE 109

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS--------GLPPEIGKMTT 299
           +G L  L  L L  N L        +L+ L VLDLS N  S        G+  EIG +  
Sbjct: 110 IGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQN 169

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L++L LTGN L  L   +  G   +L      +L  +E+S A   KE       RL    
Sbjct: 170 LKELNLTGNRLTMLPKEI--GKLQSL-----EKLDLSENSLAILPKE-----IGRLQ-NL 216

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           K LSL+G  L+  P EI +   + +LDLS N +  LP E+S   +L+
Sbjct: 217 KRLSLKGNRLTTFPKEIGKLQNLEELDLSENLLAILPKEISRFQNLR 263



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 13/171 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+LS  SL  +P E+ +               +L++L L  N +    +++  L  L  
Sbjct: 195 KLDLSENSLAILPKEIGR-------------LQNLKRLSLKGNRLTTFPKEIGKLQNLEE 241

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S N L+ LP  I     L+ L +  N +  +P EIG    L +     N+L  LP  
Sbjct: 242 LDLSENLLAILPKEISRFQNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGNRLTTLPKE 301

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           +G+  NL + +   N +T+LP+++     +  L++  N L+V     I  W
Sbjct: 302 IGKFQNLIELRLEGNRLTTLPKEIGKLQCLWSLNLSKNPLSVYEKKRIQKW 352


>gi|296198441|ref|XP_002746706.1| PREDICTED: leucine-rich repeat-containing protein 1 [Callithrix
           jacchus]
          Length = 524

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 190/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N +M++P        L     
Sbjct: 76  PEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFPELENLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + + 
Sbjct: 136 NDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPES-VG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 195 ALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL K                      LS+L +  N L+ LP  +G   +L 
Sbjct: 255 LETIPDGIGKLKK----------------------LSILKVDQNRLTQLPEAVGDCESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 293 ELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             L    L+ IP+E+ +A E+  LDL+ N +  LP  L++
Sbjct: 340 FCLRDNRLTRIPAEVSQATELHVLDLAGNRLLHLPLSLTA 379



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP ++G L  LK L +  N + +
Sbjct: 152 NLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESVGALLCLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPEA-VGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LDL  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCLRDNRLTRIPAEVSQATELHVLDLAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 155/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +  LP+   +   ++ L V    L  L  N I +   LT L   +NL
Sbjct: 106 ALQIADF--SGNPLMRLPKSFPELENLTCLSVNDVSLQSLPEN-IGNLYNLTSLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I S+P S+     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIHSLPESVGALLCLKDLWLDGNQLSELPQEIGNLKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L T+  
Sbjct: 223 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 261 GIGKLKKLSILKVDQNRL--TQLPEAVGDCESLT-----------ELVLTENQLLTLPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 308 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 98/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L  L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQIADFSGNPLMRLPKSFPELENLTCLSVNDVSLQSLPENIGNLYNLTSLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIHSLPESVGALLCL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|55728731|emb|CAH91105.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 204/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L +  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLGKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK ++  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDIQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLGKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    + +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDIQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+  G LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLGKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     + K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDIQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            +++L +L L  N L  +  SL 
Sbjct: 282 NLSSLSRLGLRYNRLSAIPRSLA 304



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 199

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   ++LS+    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSKLSM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ +C   Q+   DL  N+
Sbjct: 247 HNQLEHLPKEIGNCT--QITNLDLQHNE 272


>gi|442618952|ref|NP_001262545.1| flyers-cup, isoform G [Drosophila melanogaster]
 gi|440217397|gb|AGB95927.1| flyers-cup, isoform G [Drosophila melanogaster]
          Length = 759

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 165/366 (45%), Gaps = 65/366 (17%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQKLI 51
           K AR SG+LNLSN++L  VP  +Y + +EA               E D WW  V L  L 
Sbjct: 61  KLARKSGTLNLSNKALARVPKRLY-DINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLD 119

Query: 52  LAHNNIEKLKEDLRNLPLLTVL-----------------------NVSHNKLSELPAAIG 88
           L+ N +  +   + NL  LTVL                       NVSHNKLS+LP A+ 
Sbjct: 120 LSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMY 179

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+ L++S+N  +++  +I     L   D   N ++ LP  +G  + L+      N 
Sbjct: 180 SLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNH 239

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I  LP DL +   + K+D+  N LT L                        PE +G L +
Sbjct: 240 IKELPPDLVNMRSLQKIDLMHNDLTSL------------------------PEDMGLLRK 275

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKE 267
           L  L L  N IL +P    G  +L E +  NN +  +P  +   L  L  LDL  N++ E
Sbjct: 276 LDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITE 334

Query: 268 YCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E C LR     D+SNN++S LP  +  +  L  L + GNP++T+R  ++   T  +L
Sbjct: 335 LPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRIL 394

Query: 327 KYLRSR 332
           K L  R
Sbjct: 395 KTLHDR 400



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 5/191 (2%)

Query: 149 ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +TS+P+ +   ++   +  +D   N+L+ L N L     ++TEL+ S N++  +P+ I  
Sbjct: 568 LTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQ 627

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            +R+  L+L  N +  +P+      +L E  + NN    +P  + +L  L  L    N +
Sbjct: 628 FTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHI 687

Query: 266 KEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           K   V   Q   RLS LDL NN +  +PP +G +T +  L L GNP R  R  ++   T 
Sbjct: 688 KMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTD 747

Query: 324 ALLKYLRSRLP 334
           A++ YLR R+P
Sbjct: 748 AIMSYLRDRIP 758


>gi|455789506|gb|EMF41432.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 358

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 152/309 (49%), Gaps = 28/309 (9%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y++  +A     +   +D++ LIL+   ++ L E +  L  L +L++S N+L  LP  I
Sbjct: 15  IYRDLTKA-----FQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEI 69

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +++N +   P EI    +L K   S+NQL  LP  +G+  NL +    NN
Sbjct: 70  RQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNN 129

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNL----------------------IASWTM 185
            + ++ +++     + KL ++ N+LT LS  +                      I     
Sbjct: 130 QLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQN 189

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL  S N L   P+ IG L +L  L L  N++ +IP+ I     L E  +  N L+ +
Sbjct: 190 LQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTI 249

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P E+G+L  L  L L  NQ K   VE  QL+ L +L L  N L+ LP EIGK+  L+ L 
Sbjct: 250 PKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLN 309

Query: 305 LTGNPLRTL 313
           L  N L T+
Sbjct: 310 LDANQLTTI 318



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L +N +    +++  L  L  L +S+N+L+ LP  IG+L  L+ L++  N +  
Sbjct: 74  NLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKT 133

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I  EI     L K    +NQL  L   +G+  NL     SNN +T+ P+++     + +L
Sbjct: 134 ISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQEL 193

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT      I     L  L    N L  +P  IG L +L  L+L  N++ +IP  
Sbjct: 194 YLSNNQLTTFPKE-IGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKE 252

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++  N    +P E G+L  L  L L +NQL     E  +L+ L +L+L  
Sbjct: 253 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDA 312

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ +P EIG++  L+ L L  N L
Sbjct: 313 NQLTTIPKEIGQLQNLQTLYLRNNQL 338



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 142/288 (49%), Gaps = 9/288 (3%)

Query: 19  RSLRDVPNEVYKNFDEAGEGDKWWEAVD-LQKLILAHNNIEKLKEDLRNLPLLTVLNVSH 77
           R L+++  E++ N+++     K  E +  L KL L++N +  L  ++  L  L  LN+ +
Sbjct: 70  RQLKNL-QELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWN 128

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           N+L  +   I +L  L+ L +  N +  +  EIG    L     S+NQL   P  +G+  
Sbjct: 129 NQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQ 188

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           NL +   SNN +T+ P+++    K+  L +  N+LT + N  I     L EL    N L 
Sbjct: 189 NLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNE-IGKLQKLQELNLDVNQLT 247

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +P+ IG L  L  L L  N+  +IP       +L    +  N L+ALP E+GKL  L  
Sbjct: 248 TIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKM 307

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           L+L +NQL     E  QL+ L  L L NN LS     I +   +RKLL
Sbjct: 308 LNLDANQLTTIPKEIGQLQNLQTLYLRNNQLS-----IEEKERIRKLL 350



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 141/324 (43%), Gaps = 53/324 (16%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P++IG    L   D S NQL  LP  + +  NL +   + N +T+ P+++     + KL
Sbjct: 42  LPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKL 101

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT+L                        P  IG L  L  L+L  N++ +I   
Sbjct: 102 YLSNNQLTIL------------------------PVEIGQLQNLQELNLWNNQLKTISKE 137

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L + Y+ NN L+AL  E+GKL  L +L L +NQL  +  E  +L+ L  L LSN
Sbjct: 138 IEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSN 197

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+  P EIGK+  L+ L L  N L T+         P  +  L+     N D    TT
Sbjct: 198 NQLTTFPKEIGKLQKLQWLGLGDNQLTTI---------PNEIGKLQKLQELNLDVNQLTT 248

Query: 345 KEDLITMATRLSVTS-------------------KELSLEGMNLSAIPSEIWEAGEITKL 385
               I     L V                     K LSL+   L+A+P EI +   +  L
Sbjct: 249 IPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKML 308

Query: 386 DLSRNSIQELPPELSSCASLQVKF 409
           +L  N +  +P E+    +LQ  +
Sbjct: 309 NLDANQLTTIPKEIGQLQNLQTLY 332



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 120/278 (43%), Gaps = 47/278 (16%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R L LS+ K     +  LPE +     +  LD+  N+L +L                   
Sbjct: 30  RVLILSEQK-----LKVLPEKIGQLKNLQMLDLSDNQLIIL------------------- 65

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
                P+ I  L  L  L L+ N++ + P  I    SL + Y+ NN L+ LP E+G+L  
Sbjct: 66  -----PKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQN 120

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L +NQLK    E  QL+ L  L L NN L+ L  EIGK+  L+ L L+ N L T 
Sbjct: 121 LQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTF 180

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE--LSLEGMNLSA 371
              +  G    L              E   +   L T    +    K   L L    L+ 
Sbjct: 181 PKEI--GKLQNL-------------QELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTT 225

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           IP+EI +  ++ +L+L  N +  +P E+    +LQV F
Sbjct: 226 IPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLF 263



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 13/163 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL LSN  L   P E+ K               +LQ+L L++N +    +++  L  L  
Sbjct: 169 SLFLSNNQLTTFPKEIGK-------------LQNLQELYLSNNQLTTFPKEIGKLQKLQW 215

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ +P  IG+L  L+ L++  N +  IP EIG    L     S NQ K +P  
Sbjct: 216 LGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVE 275

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
            G+  NL       N +T+LP+++     +  L+++ N+LT +
Sbjct: 276 FGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTI 318


>gi|198437403|ref|XP_002124871.1| PREDICTED: similar to soc-2 (suppressor of clear) homolog [Ciona
           intestinalis]
          Length = 954

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 171/332 (51%), Gaps = 20/332 (6%)

Query: 14  LNLSNRSLRDVPNEVYK------------NFDEAGEGDKWWEAVDLQKLILA-HNNIEKL 60
           L++ N +L+ +P  VY+            +     E  K    + L + I A HN IE L
Sbjct: 155 LDVGNNALKSLPKSVYQIRKVINCSSNKLHRLPEPETKKSKSGLQLIRCIEASHNEIESL 214

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
             +L  L  L  L++S+N+L+ELP  IGEL  L ++DV  NS+ +IPD  G+ + L   D
Sbjct: 215 PRNLSFLTNLQSLSLSNNQLTELPQNIGELQKLITVDVCQNSLSEIPDSFGNLSNLRLLD 274

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
              N+L  LP S+ R  +L     + N I ++PE+L     +  +D+  N++  +    +
Sbjct: 275 LRENKLTTLPESMSRLEDLITLDCAGNQIKTIPEELKQIKSLQNIDLSANQIESVPT--L 332

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           ++ + L  +  S+N ++ + + I  +  +  L+L +N++  +P SI    SL  F + NN
Sbjct: 333 SNMSNLVTVDLSRNAISTLGD-IEDMPSMENLNLSENQLAKVPDSIGNIESLENFRLANN 391

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            +  LP  +G LS L  +D+ +NQL        +L  L +L   NN L+ LP   G + +
Sbjct: 392 QIQELPQTIGNLSSLQFIDVSNNQLTSLNTSLRRLGTLEILKAGNNQLTTLPQPFGFLRS 451

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
           LR++ L+ N L TL   + NGP P  +K L++
Sbjct: 452 LREVDLSNNKLNTL---VGNGPLPRGIKRLKA 480



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 175/408 (42%), Gaps = 70/408 (17%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E D+W     L  L ++ N ++ L +++ +   L  LN S NKL  LP +I  L  L  L
Sbjct: 50  EFDRWGCEKYLIGLDVSDNRLKSLDQEIGDFANLKTLNCSKNKLRFLPTSICALEFLTEL 109

Query: 97  DVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           + ++N ++ +P  I   + L     + N+L+ LP+S+G    L      NN + SLP+ +
Sbjct: 110 NATYNQLIVLPRNIYKCSMLTTIRAAHNKLRALPTSIGSIPTLLMLDVGNNALKSLPKSV 169

Query: 157 ADCSKMSKLDVEGNKLTVL--------------------SNNLIAS-------WTMLTEL 189
               K+  ++   NKL  L                    S+N I S        T L  L
Sbjct: 170 YQIRKV--INCSSNKLHRLPEPETKKSKSGLQLIRCIEASHNEIESLPRNLSFLTNLQSL 227

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L  +P+ IG L +LI +D+ QN +  IP S     +L    +  N L+ LP  +
Sbjct: 228 SLSNNQLTELPQNIGELQKLITVDVCQNSLSEIPDSFGNLSNLRLLDLRENKLTTLPESM 287

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            +L  L TLD   NQ+K    E  Q++ L  +DLS N +  + P +  M+ L  + L+ N
Sbjct: 288 SRLEDLITLDCAGNQIKTIPEELKQIKSLQNIDLSANQIESV-PTLSNMSNLVTVDLSRN 346

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            + TL                                ED+ +M        + L+L    
Sbjct: 347 AISTLGDI-----------------------------EDMPSM--------ENLNLSENQ 369

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           L+ +P  I     +    L+ N IQELP  + + +SLQ  F D+  N+
Sbjct: 370 LAKVPDSIGNIESLENFRLANNQIQELPQTIGNLSSLQ--FIDVSNNQ 415



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 180/399 (45%), Gaps = 53/399 (13%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N I  L  D+ ++P +  LN+S N+L+++P +IG +  L++  ++ N I ++P  IG
Sbjct: 343 LSRNAISTLG-DIEDMPSMENLNLSENQLAKVPDSIGNIESLENFRLANNQIQELPQTIG 401

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           + ++L   D S+NQL  L +SL R   L   KA NN +T+LP+       + ++D+  NK
Sbjct: 402 NLSSLQFIDVSNNQLTSLNTSLRRLGTLEILKAGNNQLTTLPQPFGFLRSLREVDLSNNK 461

Query: 172 LTVLSNN------------------------LIASWTMLTELIASKNLLNGMPETIGSLS 207
           L  L  N                        ++    +LT L  S + +  +P++IG L 
Sbjct: 462 LNTLVGNGPLPRGIKRLKANGNLFKGKVPGRVLHELRLLTVLDLSSSEITSLPDSIGRLR 521

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  L+L  N++ S+P S     SL +  +  NA+  LP  L    +L T++   N+L E
Sbjct: 522 LLQNLNLENNQLHSLPESSETMYSLKDINLSKNAIKKLPQNLHNWKRLVTMNAAHNKLAE 581

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR---------TLRSSL 317
                 QL  L+ LD+SNN L  +   I  M+ L+ L L  N +          TL SSL
Sbjct: 582 MPENLHQLPVLATLDMSNNELEQIDANIFHMSRLKVLRLQNNRINRINKTTNDVTLSSSL 641

Query: 318 ----VNGPTPALLKYLRSRLPENEDSEASTTK-----EDL--ITMATRLSVTSKELSLEG 366
                +G     L      L      +AS  K     ED+  +  AT L+ +  ++    
Sbjct: 642 HEVDFSGNELEELLEDMEVLSSVRWFDASCNKLSEIPEDIHKLKWATYLNFSENKIQ--- 698

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                IP ++     I    L+ N I ++P  +  C  L
Sbjct: 699 ----KIPKKVDRLKSIENFKLANNQITQIPQNIKRCKHL 733



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 28/274 (10%)

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGE-----------------------LHMLKSLDVSF 100
           L  L LLTVL++S ++++ LP +IG                        ++ LK +++S 
Sbjct: 494 LHELRLLTVLDLSSSEITSLPDSIGRLRLLQNLNLENNQLHSLPESSETMYSLKDINLSK 553

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N+I K+P  + +   LV  + + N+L E+P +L +   L+    SNN +  +  ++   S
Sbjct: 554 NAIKKLPQNLHNWKRLVTMNAAHNKLAEMPENLHQLPVLATLDMSNNELEQIDANIFHMS 613

Query: 161 KMSKLDVEGNKLTVL--SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
           ++  L ++ N++  +  + N +   + L E+  S N L  + E +  LS +   D   N+
Sbjct: 614 RLKVLRLQNNRINRINKTTNDVTLSSSLHEVDFSGNELEELLEDMEVLSSVRWFDASCNK 673

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE--YCVEACQLR 276
           +  IP  I             N +  +P ++ +L  +    L +NQ+ +    ++ C+  
Sbjct: 674 LSEIPEDIHKLKWATYLNFSENKIQKIPKKVDRLKSIENFKLANNQITQIPQNIKRCK-H 732

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           LS LD++ NS+S  P    KM  L +LL  GNPL
Sbjct: 733 LSHLDITGNSISDFPQGFFKMRKLNELLSQGNPL 766



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
            + S NKLSE+P  I +L     L+ S N I KIP ++    ++  F  ++NQ+ ++P +
Sbjct: 667 FDASCNKLSEIPEDIHKLKWATYLNFSENKIQKIPKKVDRLKSIENFKLANNQITQIPQN 726

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           + RC +LS    + N I+  P+      K+++L  +GN LT
Sbjct: 727 IKRCKHLSHLDITGNSISDFPQGFFKMRKLNELLSQGNPLT 767


>gi|395502117|ref|XP_003755432.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Sarcophilus
           harrisii]
          Length = 582

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 201/399 (50%), Gaps = 32/399 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L +L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLIML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCTQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L   L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEGLLSSLVNLNSLTLAR 340

Query: 194 NLLNGMPETIGS-LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P    S  S +  L++  NRI  IP  I S    L++  M +N L+ALP + G 
Sbjct: 341 NCFQSYPMGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDYGT 400

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            + +  L+L +NQ+ +   +   L  L VL LSNN L  LP  +G +  LR+L L  N L
Sbjct: 401 WTSMVELNLATNQITKISEDVSGLVSLEVLILSNNVLKRLPHGLGNLRKLRELDLEENKL 460

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +L + +      A LK L+  +  N            +T  T L +        G NL 
Sbjct: 461 ESLPNEI------AYLKDLQKLVLTNNQLNNLPRGIGHLTNLTHLGL--------GENLL 506

Query: 371 A-IPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           A +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 507 AHLPEEIGTLENLEELYLNDNPNLHGLPFELALCSKLSI 545



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 180/382 (47%), Gaps = 70/382 (18%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L+      N++K+LP+ +G   NL     ++N +  LP+++  C++++ 
Sbjct: 206 TVEKDIKNLSKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +PETIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPETIGNLSSLNRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAEL-------------------------GKLSKLGTLD 259
           S++ C +L E  + NN +S LP  L                          + S + +L+
Sbjct: 302 SLAKCSALEELNLENNNISTLPEGLLSSLVNLNSLTLARNCFQSYPMGGPSQFSTIYSLN 361

Query: 260 LHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR--- 314
           +  N++ +  + + +    LS L++ +N L+ LP + G  T++ +L L  N +  +    
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDYGTWTSMVELNLATNQITKISEDV 421

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           S LV+     L   +  RLP              +    +L    +EL LE   L ++P+
Sbjct: 422 SGLVSLEVLILSNNVLKRLPHG------------LGNLRKL----RELDLEENKLESLPN 465

Query: 375 EIWEAGEITKLDLSRNSIQELP 396
           EI    ++ KL L+ N +  LP
Sbjct: 466 EIAYLKDLQKLVLTNNQLNNLP 487



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 121/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQ+ ++  
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDYGTWTSMVELNLATNQITKISE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNVLKRLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N LN +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L  LP EL 
Sbjct: 479 TNNQLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEELYLNDNPNLHGLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 150/329 (45%), Gaps = 40/329 (12%)

Query: 117 VKFDCSSNQLKELPSSL-----------------------GRCLNLSDFKASNNCITSLP 153
           ++ D S   +  LPSS+                       G  +NL     S N +TSLP
Sbjct: 103 MRLDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLP 162

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           + L +  K+  LD+  NKL  +  +++     LT L    N +  + + I +LS+LI L 
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIP-SVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLS 221

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           + +N+I  +P+ I   C+L    + +N L  LP E+G  +++  LDL  N+L +      
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCTQITNLDLQHNELLDLPETIG 281

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKY 328
            L  L+ L L  N LS +P  + K + L +L L  N + TL     SSLVN  +  L + 
Sbjct: 282 NLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEGLLSSLVNLNSLTLARN 341

Query: 329 LRSRLPENEDSEAST----------TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                P    S+ ST            +    + +R  V SK L+++   L+A+P +   
Sbjct: 342 CFQSYPMGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSK-LNMKDNQLTALPLDYGT 400

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQV 407
              + +L+L+ N I ++  ++S   SL+V
Sbjct: 401 WTSMVELNLATNQITKISEDVSGLVSLEV 429



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 75/165 (45%), Gaps = 27/165 (16%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           W   V+L    LA N I K+ ED+  L  L VL +S+N L  LP  +G L  L+ LD+  
Sbjct: 401 WTSMVELN---LATNQITKISEDVSGLVSLEVLILSNNVLKRLPHGLGNLRKLRELDLEE 457

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED----- 155
           N +  +P+EI     L K   ++NQL  LP  +G   NL+      N +  LPE+     
Sbjct: 458 NKLESLPNEIAYLKDLQKLVLTNNQLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLE 517

Query: 156 -------------------LADCSKMSKLDVEGNKLTVLSNNLIA 181
                              LA CSK+S + +E   L+ L   ++A
Sbjct: 518 NLEELYLNDNPNLHGLPFELALCSKLSIMSIENCPLSHLPPQIVA 562


>gi|358337143|dbj|GAA55559.1| protein scribble homolog [Clonorchis sinensis]
          Length = 1361

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 135/247 (54%), Gaps = 2/247 (0%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           L+ELP   GELH+L+  ++  N +  +PD       L   D  SN+ +E+P+ LG+ +NL
Sbjct: 6   LTELPTDFGELHLLEKCELRDNCLKSLPDSFAQLVRLEFLDLGSNEFQEMPTVLGQLVNL 65

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
           ++    +N + +LP ++ +  ++ +LD+  N +  L +  I     L +L  S+N LN +
Sbjct: 66  TELWMDDNELKALPPEVGNMQRLQQLDLSENAINALPDE-IGGMVSLCDLNLSQNNLNCL 124

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P T G L +L  L L+QN++L++  SI GC  L E Y+  N L  LP  +G L+ +  L+
Sbjct: 125 PNTFGQLKKLTVLKLNQNQLLTLTPSIGGCSGLQELYLTENFLPTLPTTVGNLTSMFLLN 184

Query: 260 LHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           +  NQL +  VE  +   L++L L  N L  +P EIG    LR L ++GN L  L  +L 
Sbjct: 185 IDQNQLTDLPVEIGKCTSLNILSLRENLLRRIPKEIGNCLRLRVLDVSGNRLERLPLTLA 244

Query: 319 NGPTPAL 325
             P  AL
Sbjct: 245 QCPLTAL 251



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 120/239 (50%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+K  L  N ++ L +    L  L  L++  N+  E+P  +G+L  L  L +  N +  +
Sbjct: 19  LEKCELRDNCLKSLPDSFAQLVRLEFLDLGSNEFQEMPTVLGQLVNLTELWMDDNELKAL 78

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G+   L + D S N +  LP  +G  ++L D   S N +  LP       K++ L 
Sbjct: 79  PPEVGNMQRLQQLDLSENAINALPDEIGGMVSLCDLNLSQNNLNCLPNTFGQLKKLTVLK 138

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L  L+ + I   + L EL  ++N L  +P T+G+L+ +  L++ QN++  +P  I
Sbjct: 139 LNQNQLLTLTPS-IGGCSGLQELYLTENFLPTLPTTVGNLTSMFLLNIDQNQLTDLPVEI 197

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
             C SL    +  N L  +P E+G   +L  LD+  N+L+   +   Q  L+ L LS N
Sbjct: 198 GKCTSLNILSLRENLLRRIPKEIGNCLRLRVLDVSGNRLERLPLTLAQCPLTALWLSPN 256



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 122/277 (44%), Gaps = 36/277 (12%)

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
           L ELP+  G    L   +  +NC+ SLP+  A   ++  LD+  N+   +   ++     
Sbjct: 6   LTELPTDFGELHLLEKCELRDNCLKSLPDSFAQLVRLEFLDLGSNEFQEMPT-VLGQLVN 64

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           LTEL    N L  +P  +G++ RL +LDL +N I ++P  I G  SL +  +  N L+ L
Sbjct: 65  LTELWMDDNELKALPPEVGNMQRLQQLDLSENAINALPDEIGGMVSLCDLNLSQNNLNCL 124

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           P   G+L KL                      +VL L+ N L  L P IG  + L++L L
Sbjct: 125 PNTFGQLKKL----------------------TVLKLNQNQLLTLTPSIGGCSGLQELYL 162

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
           T N L TL         P  +  L S    N D    T     I   T L++    LSL 
Sbjct: 163 TENFLPTL---------PTTVGNLTSMFLLNIDQNQLTDLPVEIGKCTSLNI----LSLR 209

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
              L  IP EI     +  LD+S N ++ LP  L+ C
Sbjct: 210 ENLLRRIPKEIGNCLRLRVLDVSGNRLERLPLTLAQC 246



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 73/137 (53%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D+    V L  L L+ NN+  L      L  LTVL ++ N+L  L  +IG    L+ L +
Sbjct: 103 DEIGGMVSLCDLNLSQNNLNCLPNTFGQLKKLTVLKLNQNQLLTLTPSIGGCSGLQELYL 162

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           + N +  +P  +G+ T++   +   NQL +LP  +G+C +L+      N +  +P+++ +
Sbjct: 163 TENFLPTLPTTVGNLTSMFLLNIDQNQLTDLPVEIGKCTSLNILSLRENLLRRIPKEIGN 222

Query: 159 CSKMSKLDVEGNKLTVL 175
           C ++  LDV GN+L  L
Sbjct: 223 CLRLRVLDVSGNRLERL 239



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 39/216 (18%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P++   L RL  LDL  N    +P+ +    +L E +M +N L ALP E+G + 
Sbjct: 27  NCLKSLPDSFAQLVRLEFLDLGSNEFQEMPTVLGQLVNLTELWMDDNELKALPPEVGNMQ 86

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                                 RL  LDLS N+++ LP EIG M +L  L L+ N L  L
Sbjct: 87  ----------------------RLQQLDLSENAINALPDEIGGMVSLCDLNLSQNNLNCL 124

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSA 371
            ++        L K    +L +N+          L+T+   +   S  +EL L    L  
Sbjct: 125 PNTFGQ-----LKKLTVLKLNQNQ----------LLTLTPSIGGCSGLQELYLTENFLPT 169

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +P+ +     +  L++ +N + +LP E+  C SL +
Sbjct: 170 LPTTVGNLTSMFLLNIDQNQLTDLPVEIGKCTSLNI 205



 Score = 45.4 bits (106), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 14/171 (8%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           M + +L+ LP + G+L  L   +L  N LK       QL RL  LDL +N    +P  +G
Sbjct: 1   MNDISLTELPTDFGELHLLEKCELRDNCLKSLPDSFAQLVRLEFLDLGSNEFQEMPTVLG 60

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           ++  L +L +  N L+ L   + N     + +  +  L EN  +        ++++    
Sbjct: 61  QLVNLTELWMDDNELKALPPEVGN-----MQRLQQLDLSENAINALPDEIGGMVSLC--- 112

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                +L+L   NL+ +P+   +  ++T L L++N +  L P +  C+ LQ
Sbjct: 113 -----DLNLSQNNLNCLPNTFGQLKKLTVLKLNQNQLLTLTPSIGGCSGLQ 158


>gi|418668202|ref|ZP_13229605.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756059|gb|EKR17686.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 155/309 (50%), Gaps = 28/309 (9%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y++  +A     +   +D++ LIL+   ++ L E +  L  L +L++S N+L  LP  I
Sbjct: 35  IYRDLTKA-----FQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEI 89

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +++N +   P EI    +L K   S+NQL  LP  +G+  NL +    NN
Sbjct: 90  RQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNN 149

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLT---------------VLSNNLIASWTM------- 185
            + ++ +++     + KL ++ N+LT                LSNN + ++         
Sbjct: 150 QLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQN 209

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL  S N L   P+ IG L +L  L L  N++ +IP+ I     L E  +  N L+ +
Sbjct: 210 LQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTI 269

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P E+G+L  L  L L  NQ K   VE  QL+ L +L L  N L+ LP EIGK+  L+ L 
Sbjct: 270 PKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLN 329

Query: 305 LTGNPLRTL 313
           L  N L T+
Sbjct: 330 LDANQLTTI 338



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L +N +    +++  L  L  L +S+N+L+ LP  IG+L  L+ L++  N +  
Sbjct: 94  NLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKT 153

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I  EI     L K    +NQL   P  +G+  NL     SNN +T+ P+++     + +L
Sbjct: 154 ISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQEL 213

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT      I     L  L    N L  +P  IG L +L  L+L  N++ +IP  
Sbjct: 214 YLSNNQLTTFPKE-IGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKE 272

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++  N    +P E G+L  L  L L +NQL     E  +L+ L +L+L  
Sbjct: 273 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDA 332

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ +P EIG++  L+ L L  N L
Sbjct: 333 NQLTTIPKEIGQLQNLQTLYLRNNQL 358



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 141/324 (43%), Gaps = 53/324 (16%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P++IG    L   D S NQL  LP  + +  NL +   + N +T+ P+++     + KL
Sbjct: 62  LPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKL 121

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT+L                        P  IG L  L  L+L  N++ +I   
Sbjct: 122 YLSNNQLTIL------------------------PVEIGQLQNLQELNLWNNQLKTISKE 157

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L + Y+ NN L+A P E+GKL  L +L L +NQL  +  E  +L+ L  L LSN
Sbjct: 158 IEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSN 217

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+  P EIGK+  L+ L L  N L T+         P  +  L+     N D    TT
Sbjct: 218 NQLTTFPKEIGKLQKLQWLGLGDNQLTTI---------PNEIGKLQKLQELNLDVNQLTT 268

Query: 345 KEDLITMATRLSVTS-------------------KELSLEGMNLSAIPSEIWEAGEITKL 385
               I     L V                     K LSL+   L+A+P EI +   +  L
Sbjct: 269 IPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKML 328

Query: 386 DLSRNSIQELPPELSSCASLQVKF 409
           +L  N +  +P E+    +LQ  +
Sbjct: 329 NLDANQLTTIPKEIGQLQNLQTLY 352



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 14/261 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           ++  ++   L LSN  L  +P E+              +  +LQ+L L +N ++ + +++
Sbjct: 112 IEQLKSLHKLYLSNNQLTILPVEI-------------GQLQNLQELNLWNNQLKTISKEI 158

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L + +N+L+  P  IG+L  LKSL +S N +   P EIG    L +   S+N
Sbjct: 159 EQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNN 218

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL   P  +G+   L      +N +T++P ++    K+ +L+++ N+LT +    I    
Sbjct: 219 QLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKE-IGQLQ 277

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L  S N    +P   G L  L  L L  N++ ++P  I    +L    +  N L+ 
Sbjct: 278 NLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTT 337

Query: 245 LPAELGKLSKLGTLDLHSNQL 265
           +P E+G+L  L TL L +NQL
Sbjct: 338 IPKEIGQLQNLQTLYLRNNQL 358



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 122/286 (42%), Gaps = 42/286 (14%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           ++L  +    L++     S   +  LPE +     +  LD+  N+L +L           
Sbjct: 37  RDLTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIIL----------- 85

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                        P+ I  L  L  L L+ N++ + P  I    SL + Y+ NN L+ LP
Sbjct: 86  -------------PKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILP 132

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+G+L  L  L+L +NQLK    E  QL+ L  L L NN L+  P EIGK+  L+ L L
Sbjct: 133 VEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFL 192

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE--LS 363
           + N L T    +  G    L              E   +   L T    +    K   L 
Sbjct: 193 SNNQLTTFPKEI--GKLQNL-------------QELYLSNNQLTTFPKEIGKLQKLQWLG 237

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           L    L+ IP+EI +  ++ +L+L  N +  +P E+    +LQV F
Sbjct: 238 LGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLF 283



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 10/172 (5%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEGDKWW-----EAVDLQKLI---LAHNNIEKLKE 62
           SL LSN  L   P E+ K  N  E    +        E   LQKL    L  N +  +  
Sbjct: 189 SLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPN 248

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  LN+  N+L+ +P  IG+L  L+ L +S+N    IP E G    L      
Sbjct: 249 EIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLD 308

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +NQL  LP  +G+  NL       N +T++P+++     +  L +  N+L++
Sbjct: 309 ANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLSI 360


>gi|403259517|ref|XP_003922256.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Saimiri boliviensis
           boliviensis]
          Length = 582

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 205/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSRLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 179/382 (46%), Gaps = 70/382 (18%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSRLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLNRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCV------------- 270
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V             
Sbjct: 302 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 271 -EACQLR------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR--- 314
            E  ++             LS L++ +N L+ LP + G  T++ +L L  N L  +    
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           S LV+     L   L  +LP              +    +L    +EL LE   L ++P+
Sbjct: 422 SGLVSLEVLILSNNLLKKLPHG------------LGNLRKL----RELDLEENKLESLPN 465

Query: 375 EIWEAGEITKLDLSRNSIQELP 396
           EI    ++ KL L+ N +  LP
Sbjct: 466 EIAYLKDLQKLVLTNNQLTTLP 487



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSRLSMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            +++L +L L  N L  +  SL 
Sbjct: 282 NLSSLNRLGLRYNRLSAIPRSLA 304



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 97/208 (46%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 199

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   +RLS+    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSRLSM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ +C   Q+   DL  N+
Sbjct: 247 HNQLEHLPKEIGNCT--QITNLDLQHNE 272


>gi|421117845|ref|ZP_15578200.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010627|gb|EKO68763.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 636

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 125/243 (51%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  IG+L  L+ L++ +N +  +P EIG    L + D   NQL   P+
Sbjct: 47  VLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPA 106

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +     L     S N +  LP ++     +  L +  NKLT      I     L +L  
Sbjct: 107 VIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE-IGRLQNLQDLGL 165

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            KN L   P+ IG L  L  L L++N++ + P  I    +L + ++  N L+ALP E+G+
Sbjct: 166 YKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQ 225

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TLDL +NQ      E  QL+ L  L+L +N L+ LP EIG++  L++L L  N L
Sbjct: 226 LKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRL 285

Query: 311 RTL 313
             L
Sbjct: 286 TVL 288



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 186/439 (42%), Gaps = 66/439 (15%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 48  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 94

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 95  DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 154

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           GR  NL D     N +T+ P+++     +  L +  NKLT      I     L +L  S+
Sbjct: 155 GRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKE-IGQLQNLQKLWLSE 213

Query: 194 NLLNGMPETIGSLSRLIRLDLHQ-----------------------NRILSIPSSISGCC 230
           N L  +P+ IG L  L  LDL                         N++ ++P  I    
Sbjct: 214 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 273

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L E Y+ NN L+ LP E+G+L  L  L    N+L     E  QL+ L  L+L NN L+ 
Sbjct: 274 NLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTV 333

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK---- 345
           LP EIG++  L+ L L  NPL       +    P       S L   E +E    +    
Sbjct: 334 LPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGVYRNLNL 387

Query: 346 ---EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGEITKLDL 387
              E L     RL   +               +EL L     S +P EI     +  L L
Sbjct: 388 AQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLAL 447

Query: 388 SRNSIQELPPELSSCASLQ 406
             N ++++P E+    +L+
Sbjct: 448 GLNGLKKIPSEIGQLRNLE 466



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 132/260 (50%), Gaps = 2/260 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 43  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 102

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     +  
Sbjct: 103 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQD 162

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  NKLT      I     L +L   KN L   P+ IG L  L +L L +NR+ ++P 
Sbjct: 163 LGLYKNKLTTFPKE-IGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPK 221

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    + NN  + LP E+G+L  L TL+L  NQL    VE  QL+ L  L L 
Sbjct: 222 EIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR 281

Query: 284 NNSLSGLPPEIGKMTTLRKL 303
           NN L+ LP EIG++  L+ L
Sbjct: 282 NNRLTVLPKEIGQLQNLQML 301



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 126/278 (45%), Gaps = 38/278 (13%)

Query: 17  SNRSLRDVPNE-VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED----LRNLPLLT 71
           SN  LR+V  + VY+N + A E     E + +  L L + N  +L        RNL  L 
Sbjct: 369 SNLDLREVAEDGVYRNLNLAQE-----EPLKVFDLRLQYKNFSQLFPKVILKFRNLRELY 423

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           + +      S LP  I  L  LK L +  N + KIP EIG    L   +  +N+L+ LP 
Sbjct: 424 LYDCG---FSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPK 480

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 481 EIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 523

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++P+ I    +L E  + +N  + LP E+GK
Sbjct: 524 -------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGK 576

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           L KL TLDL +NQL     E  QL+ L  L L NN  S
Sbjct: 577 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 614



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 163/390 (41%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 228 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 287

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 288 LPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 347

Query: 166 DVEGNKLTVLSNNLIASWTMLTEL----------------------------IASKNLLN 197
           ++  N L++     I      + L                            +  KN   
Sbjct: 348 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 407

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 408 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEA 467

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 468 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 527

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 528 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 574

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 575 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 604



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 175/391 (44%), Gaps = 42/391 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L+ N +  L +++  L  L  L++ +N+ + LP  IG+L  L++L++  N +  
Sbjct: 205 NLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLAT 264

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L +    +N+L  LP  +G+  NL    +  N +T+LP+++     +  L
Sbjct: 265 LPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTL 324

Query: 166 DVEGNKLTVLSNNL-----IASWTMLTE---LIASKNLLNGMPETIGSLSRLIR------ 211
           ++  N+LTVL   +     +    +L     L   K +    P++   L  +        
Sbjct: 325 NLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRN 384

Query: 212 LDLHQNRILSI--------------PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
           L+L Q   L +              P  I    +L E Y+ +   S LP E+ +L  L  
Sbjct: 385 LNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKY 444

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L L  N LK+   E  QLR L  L+L  N L  LP EIG++  L++L L  N L+     
Sbjct: 445 LALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIF--- 501

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
                 PA ++ L+     +      TT    I     L      L+L+   L+ +P+EI
Sbjct: 502 ------PAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQT----LNLQRNQLTNLPAEI 551

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +   + +LDL+ N    LP E+     LQ 
Sbjct: 552 EQLKNLQELDLNDNQFTVLPKEIGKLKKLQT 582


>gi|418701717|ref|ZP_13262639.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759281|gb|EKR25496.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 379

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 151/307 (49%), Gaps = 12/307 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +L+LS    + +P E+   KN  E          +        +L+KL L+ N I+ + +
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +  N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S
Sbjct: 112 EIEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 171

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQ+K +P  + +   L      NN +T+LP+++     +  LD+  N+LT L    I  
Sbjct: 172 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGH 230

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P  IG L  L  L+L  NR+ ++   I    +L    + +N L
Sbjct: 231 LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 290

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G+L  L  LDL SNQL        QL+ L VL L+NN L+ LP EIG++  L+
Sbjct: 291 TIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQ 350

Query: 302 KLLLTGN 308
           +L L  N
Sbjct: 351 ELYLNNN 357



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 136/263 (51%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 55  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L       NQL  LP  +G+   L       N +T+LP+++     +  L++  N+
Sbjct: 115 KLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  +    I     L  L    N L  +P+ IG L  L  LDL  NR+ ++P  I    +
Sbjct: 175 IKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQN 233

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L + Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  LDL +N L+  
Sbjct: 234 LQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIF 293

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P EIG++  L+ L L  N L TL
Sbjct: 294 PKEIGQLKNLQVLDLGSNQLTTL 316



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 147/330 (44%), Gaps = 38/330 (11%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           ++L  A+     +++LD+S N    +P EIG    L + + + NQL  LP  +G+  NL 
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               S N I ++P+++    K+  L +  N+LT L    I     L  L   KN L  +P
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQE-IGQLQKLQWLYLPKNQLTTLP 156

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L  L  L+L  N+I +IP  I     L    + NN L+ LP E+G+L  L +LDL
Sbjct: 157 QEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDL 216

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +N+L     E   L+ L  L L +N L+ LP EIG++  L+ L L  N L TL   +  
Sbjct: 217 STNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI-- 274

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                                     E L  +        K L L    L+  P EI + 
Sbjct: 275 --------------------------EQLQNL--------KSLDLRSNQLTIFPKEIGQL 300

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKF 409
             +  LDL  N +  LP  +    +L+V F
Sbjct: 301 KNLQVLDLGSNQLTTLPEGIGQLQNLKVLF 330



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 112/220 (50%), Gaps = 24/220 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + +++  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 164 NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 224 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT+                         P+ IG L  L  LDL  N++ ++P  
Sbjct: 284 DLRSNQLTI------------------------FPKEIGQLKNLQVLDLGSNQLTTLPEG 319

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           I    +L   ++ NN L+ LP E+G+L  L  L L++NQ 
Sbjct: 320 IGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQF 359


>gi|302835578|ref|XP_002949350.1| hypothetical protein VOLCADRAFT_89724 [Volvox carteri f.
           nagariensis]
 gi|300265177|gb|EFJ49369.1| hypothetical protein VOLCADRAFT_89724 [Volvox carteri f.
           nagariensis]
          Length = 383

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 147/313 (46%), Gaps = 50/313 (15%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS---------- 95
           DLQKL L++N + KL E++ NLP L  L +  N L  LP  + ++  LK           
Sbjct: 36  DLQKLWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGVTQMTQLKKLWLPANMLVR 95

Query: 96  -------------LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
                        LDVS N + ++  EIG  T+L + D  +N LK LP ++GR   +   
Sbjct: 96  LPAEVCAITSLEWLDVSENKLEEVCAEIGQLTSLTRLDLHTNVLKGLPPTIGRLTRVKHL 155

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
               N + SLP D+  C+ +  L +  N+L  L    +   T L  L    N L  +P  
Sbjct: 156 SLHFNQLESLPPDIGQCTSLVWLSLNANQLKQLPTE-MGELTGLVRLSLHINELESVPPE 214

Query: 203 IGSLSRLIRLDLHQNRILSIPSSI-----SGCCSLA--------------------EFYM 237
           +G L+ L  L LH+NR+  +P  +       CC L+                    E ++
Sbjct: 215 LGRLTGLEALSLHKNRLTRLPPELPLGLAGSCCRLSLYENQLGEVPPELGNMGLLQELWL 274

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 296
            +N L+++P+ELG+L +L  L L  NQL     E   L RL  L L +N L  LP E+G 
Sbjct: 275 YSNQLTSVPSELGRLGELRRLWLDRNQLTSLPREISGLTRLQELYLDHNRLVELPSELGA 334

Query: 297 MTTLRKLLLTGNP 309
           +T LR+L L GNP
Sbjct: 335 LTQLRRLYLEGNP 347



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 154/332 (46%), Gaps = 34/332 (10%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           +SELP A   L  L+ L +S N + K+P+EIG+   L      SN L+ LP  + +   L
Sbjct: 24  ISELPPAFFNLPDLQKLWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGVTQMTQL 83

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
                  N +  LP ++   + +  LDV  NKL  +    I   T LT L    N+L G+
Sbjct: 84  KKLWLPANMLVRLPAEVCAITSLEWLDVSENKLEEVCAE-IGQLTSLTRLDLHTNVLKGL 142

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P TIG L+R+  L LH N++ S+P  I  C SL    +  N L  LP E+G+L+ L  L 
Sbjct: 143 PPTIGRLTRVKHLSLHFNQLESLPPDIGQCTSLVWLSLNANQLKQLPTEMGELTGLVRLS 202

Query: 260 LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           LH N+L+                       +PPE+G++T L  L L  N L  L   L  
Sbjct: 203 LHINELES----------------------VPPELGRLTGLEALSLHKNRLTRLPPELPL 240

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
           G   +     R  L EN+  E      ++  +        +EL L    L+++PSE+   
Sbjct: 241 GLAGSC---CRLSLYENQLGEVPPELGNMGLL--------QELWLYSNQLTSVPSELGRL 289

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           GE+ +L L RN +  LP E+S    LQ  + D
Sbjct: 290 GELRRLWLDRNQLTSLPREISGLTRLQELYLD 321


>gi|418731390|ref|ZP_13289789.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410773922|gb|EKR53943.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 315

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 135/284 (47%), Gaps = 30/284 (10%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           VY N  EA +  K     D+++L LA   +  L +++  L  L  LN+  N+L+ LP  I
Sbjct: 41  VYHNLTEALQNPK-----DVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEI 95

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +SFN    +P EI     L   D + N+L  LP  + +   L   +  NN
Sbjct: 96  AQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNN 155

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + +LP+++     +  L + GN+LT L                        PE I  L 
Sbjct: 156 QLANLPQEITQLQNLELLFLSGNRLTTL------------------------PEEIAQLR 191

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L RL ++ NR  + P  I+    L    +G N L+ LP E+G+L  L  L L  NQL  
Sbjct: 192 SLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAI 251

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              E  QL+ L  L LS N L+ LP EIG++  L+ L+L GNP+
Sbjct: 252 LPEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPI 295



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 118/240 (49%), Gaps = 6/240 (2%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           V HN    L  A+     ++ LD++   +  +  EIG    L K +  SN+L  LP  + 
Sbjct: 41  VYHN----LTEALQNPKDVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIA 96

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           +  NL   + S N  T+LP+++     +  LD+  N+LT L    IA +  L  L    N
Sbjct: 97  QLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEE-IAQFQKLQWLRLDNN 155

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+ I  L  L  L L  NR+ ++P  I+   SL   Y+  N  +  P E+ +L K
Sbjct: 156 QLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQK 215

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL  NQL     E  +L+ L  L L  N L+ LP EI ++  L+ L+L+GN L TL
Sbjct: 216 LQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTL 275



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 129/285 (45%), Gaps = 22/285 (7%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           +L E L +   + +LD+    LT L    I     L +L    N L  +PE I  L  L 
Sbjct: 44  NLTEALQNPKDVRQLDLAAKGLTTLLKE-IGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQ 102

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           RL L  N+  ++P  I    +L    + +N L+ LP E+ +  KL  L L +NQL     
Sbjct: 103 RLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLANLPQ 162

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E  QL+ L +L LS N L+ LP EI ++ +L++L + GN   T    +        L+ L
Sbjct: 163 EITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQ------LQKL 216

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           +  L    +   +  KE       RL    K L L G  L+ +P EI +   +  L LS 
Sbjct: 217 QG-LDLGGNQLTTLPKE-----IGRLQ-NLKALHLGGNQLAILPEEITQLQNLQTLILSG 269

Query: 390 NSIQELPPELSSCASLQ---VKFSDLVTNKESCISG----CYLYW 427
           N +  LP E+    +LQ   +K + +V+ +   I      C +Y+
Sbjct: 270 NQLTTLPKEIGRLQNLQTLILKGNPIVSKERQRIQQLLPKCTIYF 314



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 50/105 (47%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L +  N      E++  L  L  L++  N+L+ LP  IG L  LK+L +  N +  +
Sbjct: 193 LQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAIL 252

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           P+EI     L     S NQL  LP  +GR  NL       N I S
Sbjct: 253 PEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPIVS 297


>gi|45656719|ref|YP_000805.1| hypothetical protein LIC10828 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084288|ref|ZP_15545151.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102963|ref|ZP_15563565.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599955|gb|AAS69442.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367278|gb|EKP22664.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433188|gb|EKP77536.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 378

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 155/309 (50%), Gaps = 28/309 (9%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y++  +A     +   +D++ LIL+   ++ L E +  L  L +L++S N+L  LP  I
Sbjct: 35  IYRDLTKA-----FQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEI 89

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +++N +   P EI    +L K   S+NQL  LP  +G+  NL +    NN
Sbjct: 90  RQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNN 149

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLT---------------VLSNNLIASWTM------- 185
            + ++ +++     + KL ++ N+LT                LSNN + ++         
Sbjct: 150 QLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQN 209

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL  S N L   P+ IG L +L  L L  N++ +IP+ I     L E  +  N L+ +
Sbjct: 210 LQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTI 269

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P E+G+L  L  L L  NQ K   VE  QL+ L +L L  N L+ LP EIGK+  L+ L 
Sbjct: 270 PKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLN 329

Query: 305 LTGNPLRTL 313
           L  N L T+
Sbjct: 330 LDANQLTTI 338



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 132/264 (50%), Gaps = 2/264 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L +N +    +++  L  L  L +S+N+L+ LP  IG+L  L+ L++  N +  
Sbjct: 94  NLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKT 153

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I  EI     L K    +NQL  L   +G+  NL     SNN +T+ P+++     + +L
Sbjct: 154 ISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQEL 213

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT      I     L  L    N L  +P  IG L +L  L+L  N++ +IP  
Sbjct: 214 YLSNNQLTTFPKE-IGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKE 272

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++  N    +P E G+L  L  L L +NQL     E  +L+ L +L+L  
Sbjct: 273 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDA 332

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGN 308
           N L+ +P EIG++  L+ L L  N
Sbjct: 333 NQLTTIPKEIGQLQNLQTLYLRNN 356



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 141/288 (48%), Gaps = 9/288 (3%)

Query: 19  RSLRDVPNEVYKNFDEAGEGDKWWEAVD-LQKLILAHNNIEKLKEDLRNLPLLTVLNVSH 77
           R L+++  E++ N+++     K  E +  L KL L++N +  L  ++  L  L  LN+ +
Sbjct: 90  RQLKNL-QELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWN 148

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           N+L  +   I +L  L+ L +  N +  +  EIG    L     S+NQL   P  +G+  
Sbjct: 149 NQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQ 208

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           NL +   SNN +T+ P+++    K+  L +  N+LT + N  I     L EL    N L 
Sbjct: 209 NLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNE-IGKLQKLQELNLDVNQLT 267

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +P+ IG L  L  L L  N+  +IP       +L    +  N L+ALP E+GKL  L  
Sbjct: 268 TIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKM 327

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           L+L +NQL     E  QL+ L  L L NN  S     I +   +RKLL
Sbjct: 328 LNLDANQLTTIPKEIGQLQNLQTLYLRNNQFS-----IEEKERIRKLL 370



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 151/351 (43%), Gaps = 64/351 (18%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P++IG    L   D S NQL  LP  + +  NL +   + N +T+ P+++     + KL
Sbjct: 62  LPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKL 121

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT+L                        P  IG L  L  L+L  N++ +I   
Sbjct: 122 YLSNNQLTIL------------------------PVEIGQLQNLQELNLWNNQLKTISKE 157

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L + Y+ NN L+AL  E+GKL  L +L L +NQL  +  E  +L+ L  L LSN
Sbjct: 158 IEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSN 217

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+  P EIGK+  L+ L L  N L T+         P  +  L+     N D    TT
Sbjct: 218 NQLTTFPKEIGKLQKLQWLGLGDNQLTTI---------PNEIGKLQKLQELNLDVNQLTT 268

Query: 345 KEDLITMATRLSVTS-------------------KELSLEGMNLSAIPSEIWEAGEITKL 385
               I     L V                     K LSL+   L+A+P EI +   +  L
Sbjct: 269 IPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKML 328

Query: 386 DLSRNSIQELPPELSSCASLQV------KFSDLVTNKESC---ISGCYLYW 427
           +L  N +  +P E+    +LQ       +FS  +  KE     +  C +Y+
Sbjct: 329 NLDANQLTTIPKEIGQLQNLQTLYLRNNQFS--IEEKERIRKLLPKCQIYF 377



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 122/286 (42%), Gaps = 42/286 (14%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           ++L  +    L++     S   +  LPE +     +  LD+  N+L +L           
Sbjct: 37  RDLTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIIL----------- 85

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                        P+ I  L  L  L L+ N++ + P  I    SL + Y+ NN L+ LP
Sbjct: 86  -------------PKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILP 132

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+G+L  L  L+L +NQLK    E  QL+ L  L L NN L+ L  EIGK+  L+ L L
Sbjct: 133 VEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFL 192

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE--LS 363
           + N L T    +  G    L              E   +   L T    +    K   L 
Sbjct: 193 SNNQLTTFPKEI--GKLQNL-------------QELYLSNNQLTTFPKEIGKLQKLQWLG 237

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           L    L+ IP+EI +  ++ +L+L  N +  +P E+    +LQV F
Sbjct: 238 LGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLF 283



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 13/163 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL LSN  L   P E+ K               +LQ+L L++N +    +++  L  L  
Sbjct: 189 SLFLSNNQLTTFPKEIGK-------------LQNLQELYLSNNQLTTFPKEIGKLQKLQW 235

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ +P  IG+L  L+ L++  N +  IP EIG    L     S NQ K +P  
Sbjct: 236 LGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVE 295

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
            G+  NL       N +T+LP+++     +  L+++ N+LT +
Sbjct: 296 FGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTI 338


>gi|71991525|ref|NP_001023850.1| Protein LET-413, isoform a [Caenorhabditis elegans]
 gi|7899272|emb|CAB91651.1| LET-413 protein [Caenorhabditis elegans]
 gi|351062134|emb|CCD70053.1| Protein LET-413, isoform a [Caenorhabditis elegans]
          Length = 679

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 185/365 (50%), Gaps = 17/365 (4%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           + +N++ +  D+     L  LN++ N + EL   +  L  L+ LDVS N +  +P EIG+
Sbjct: 21  SQSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGN 80

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            T L++ + + N + +LP ++  C  L+    S+N  T LPE + +CS ++ L +    L
Sbjct: 81  LTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSL 140

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           T+L +N I S T L  L A  NLL  +P +I  L +L  LDL QN + ++P+ I    SL
Sbjct: 141 TLLPSN-IGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSL 199

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
            EFY+  N+L++LP  +     L  LD+  NQ+        ++  L+ L++S N +  LP
Sbjct: 200 REFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELP 259

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
              G++  L+ L    N L  L S +  G   +L +     L +N  ++   T  DL  +
Sbjct: 260 SSFGELKRLQMLKADRNSLHNLTSEI--GKCQSLTELY---LGQNFLTDLPDTIGDLRQL 314

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
            T        L+++  NLS IP  I     +T L L +N + ELP  +  C +L V   D
Sbjct: 315 TT--------LNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVL--D 364

Query: 412 LVTNK 416
           + +NK
Sbjct: 365 VASNK 369



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 143/289 (49%), Gaps = 27/289 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N+I KL + ++N  LLT LN+S N  + LP  I E   +  L ++  S+  +
Sbjct: 84  LIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLL 143

Query: 107 PDEIGSAT-----------------------ALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P  IGS T                        L + D   N+L+ LP+ +G+  +L +F 
Sbjct: 144 PSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFY 203

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
              N +TSLP+ ++ C  + +LDV  N++  L  NL      LT+L  S N +  +P + 
Sbjct: 204 VDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENL-GRMPNLTDLNISINEIIELPSSF 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L RL  L   +N + ++ S I  C SL E Y+G N L+ LP  +G L +L TL++  N
Sbjct: 263 GELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCN 322

Query: 264 QLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L +    +  C+  L+VL L  N L+ LP  IGK   L  L +  N L
Sbjct: 323 NLSDIPDTIGNCK-SLTVLSLRQNILTELPMTIGKCENLTVLDVASNKL 370



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 1/176 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L ++ N I +L E+L  +P LT LN+S N++ ELP++ GEL  L+ L    NS+  +
Sbjct: 222 LDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNL 281

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
             EIG   +L +     N L +LP ++G    L+      N ++ +P+ + +C  ++ L 
Sbjct: 282 TSEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLS 341

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           +  N LT L    I     LT L  + N L  +P T+  L +L  L L +N+  SI
Sbjct: 342 LRQNILTELPMT-IGKCENLTVLDVASNKLPHLPFTVKVLYKLQALWLSENQTQSI 396


>gi|195146072|ref|XP_002014014.1| GL24452 [Drosophila persimilis]
 gi|194102957|gb|EDW25000.1| GL24452 [Drosophila persimilis]
          Length = 655

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 204/424 (48%), Gaps = 36/424 (8%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQKLI 51
           K AR SG+LNLSN+ L  VP+ +Y + +EA               + D WW  V L  L 
Sbjct: 74  KLARKSGTLNLSNKGLASVPDRLY-DINEADAESKAATLEQLSIKDEDAWWNQVPLTNLD 132

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N +  +   + NL  LTVL +  N L +LPA IG+L  L  L+VS N +  +P E+ 
Sbjct: 133 LSSNALSHISPKIENLQSLTVLILHDNALVDLPAEIGKLEKLMRLNVSRNKLCDLPRELY 192

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           S   L   + S N+  EL   +     L    A +N I SLP  +    +++ L +  N 
Sbjct: 193 SLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNSIKSLPGGIGFLVRLTALLLPYNH 252

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  L  +L+ +   L  L   +N L  +PE +G L +L  L +  N IL + +   G  +
Sbjct: 253 IKDLPPDLV-NMRSLQRLDLMQNDLTCLPEDMGLLRKLQFLYIQHNDILEL-TDFEGNET 310

Query: 232 LAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSG 289
           L E +  NN +S +P  + + L  L  LDL  N++ +   E      L+ LD+SNNS+  
Sbjct: 311 LTELHASNNYISNIPVRMCENLPHLKVLDLRDNKITQLPDELCLLRNLNRLDVSNNSIDT 370

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR-LPENEDSEASTT---- 344
           LP  +  +  L  L + GNP++++R  ++   T  +L+ L+ R + +++D   S +    
Sbjct: 371 LPVSLAALAHLISLQVEGNPIKSIRRDILQCGTSRILRTLQERSMAKSKDEGESDSGAGA 430

Query: 345 --------KEDLITMATRLSVT-SKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSI 392
                    +       R  +  ++ L++    ++ +P E+++  +   +  +D +RN +
Sbjct: 431 RLCGGQAGNDTAANYPDRYKLRHTRTLAVNLEEITDVPEEVFQLAQKEGVHVVDFARNQL 490

Query: 393 QELP 396
           + +P
Sbjct: 491 RTVP 494



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 138/324 (42%), Gaps = 55/324 (16%)

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
           NLP L VL++  NK+++LP  +  L  L  LDVS NSI  +P  + +   L+      N 
Sbjct: 331 NLPHLKVLDLRDNKITQLPDELCLLRNLNRLDVSNNSIDTLPVSLAALAHLISLQVEGNP 390

Query: 126 LKELPSSLGRC----------------------------LNLSDFKASNNC--------- 148
           +K +   + +C                              L   +A N+          
Sbjct: 391 IKSIRRDILQCGTSRILRTLQERSMAKSKDEGESDSGAGARLCGGQAGNDTAANYPDRYK 450

Query: 149 -------------ITSLPED---LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
                        IT +PE+   LA    +  +D   N+L  + N L     ++TEL+ +
Sbjct: 451 LRHTRTLAVNLEEITDVPEEVFQLAQKEGVHVVDFARNQLRTVPNGLQHMQNIVTELVLA 510

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N +  +P+ I   +R+  L+L  N +  +P       +L E  + NN  S LP+ L  L
Sbjct: 511 HNRIGQVPQFISQFTRITLLNLSNNLLTDLPKEFGVLNTLRELNIANNRFSFLPSGLYDL 570

Query: 253 SKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L  L    N + E  V   Q   RLS LDL NN +  +PP +G +T +  L L GNP 
Sbjct: 571 QGLEILIASDNHINELNVAGLQRMPRLSTLDLRNNDIDFIPPILGTLTNITHLELVGNPF 630

Query: 311 RTLRSSLVNGPTPALLKYLRSRLP 334
           R  R  ++   T +++ YLR R+P
Sbjct: 631 RQPRHQILMKGTESIMSYLRDRVP 654



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 15/261 (5%)

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           ++ LD+  N L+ +S   I +   LT LI   N L  +P  IG L +L+RL++ +N++  
Sbjct: 128 LTNLDLSSNALSHISPK-IENLQSLTVLILHDNALVDLPAEIGKLEKLMRLNVSRNKLCD 186

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 280
           +P  +     L    +  N  S L  ++  L  L  LD   N +K        L RL+ L
Sbjct: 187 LPRELYSLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNSIKSLPGGIGFLVRLTAL 246

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
            L  N +  LPP++  M +L++L L  N L  L   +        L    + + E  D E
Sbjct: 247 LLPYNHIKDLPPDLVNMRSLQRLDLMQNDLTCLPEDMGLLRKLQFLYIQHNDILELTDFE 306

Query: 341 ASTTKEDLITMATRLSVTS----------KELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
            + T  +L      +S             K L L    ++ +P E+     + +LD+S N
Sbjct: 307 GNETLTELHASNNYISNIPVRMCENLPHLKVLDLRDNKITQLPDELCLLRNLNRLDVSNN 366

Query: 391 SIQELPPELSSCA---SLQVK 408
           SI  LP  L++ A   SLQV+
Sbjct: 367 SIDTLPVSLAALAHLISLQVE 387


>gi|418678217|ref|ZP_13239491.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321407|gb|EJO69267.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 377

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 145/301 (48%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS    + +P E+ K               +LQ+L L  N +  L +++  L  L  L
Sbjct: 51  LNLSANRFKTLPKEIGK-------------LKNLQELNLNKNQLTILPKEIGQLKNLRKL 97

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+ + LP  + +L  LK L +  N +  +P+EIG    L   + + NQ K +P  +
Sbjct: 98  NLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEI 157

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL       N +T+LP ++     +  L +  N+LT L N  I     L  L  S 
Sbjct: 158 GQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNE-IGQLQNLQSLYLST 216

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L L  N++  +P+ I    +L   Y+  N  + LP E+GKL 
Sbjct: 217 NRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYNQFTTLPKEIGKLQ 276

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L+L+ NQLK       QL+ L  LDL  N  + LP EIGK+  L++L L  N L T
Sbjct: 277 NLQRLELNYNQLKTLPKGIGQLQNLQWLDLGYNQFTILPEEIGKLKNLQELYLRDNQLTT 336

Query: 313 L 313
           +
Sbjct: 337 I 337



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 141/287 (49%), Gaps = 12/287 (4%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            LNL+   L  +P E+   KN  +    D  +  +        +L++L L  N +  L  
Sbjct: 73  ELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPN 132

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L VL ++HN+   +P  IG+L  L++L++ +N +  +P+EIG    L      
Sbjct: 133 EIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLG 192

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           SNQL  LP+ +G+  NL     S N +T+LP ++     +  L +  N+LT+L N  I  
Sbjct: 193 SNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNE-IGQ 251

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L    N    +P+ IG L  L RL+L+ N++ ++P  I    +L    +G N  
Sbjct: 252 LKNLQTLYLRYNQFTTLPKEIGKLQNLQRLELNYNQLKTLPKGIGQLQNLQWLDLGYNQF 311

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           + LP E+GKL  L  L L  NQL     E  QL+ L  L L +N LS
Sbjct: 312 TILPEEIGKLKNLQELYLRDNQLTTIPEEIGQLQNLQELYLRDNQLS 358



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 123/243 (50%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S N+   LP  IG+L  L+ L+++ N +  +P EIG    L K +   NQ   LP 
Sbjct: 50  VLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL +    +N +T+LP ++     +  L++  N+   +    I     L  L  
Sbjct: 110 EVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKE-IGQLKNLQTLNL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P  IG L  L  L L  N++ ++P+ I    +L   Y+  N L+ LP E+G+
Sbjct: 169 GYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQ 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L +L L SNQL     E  QL+ L  L L  N  + LP EIGK+  L++L L  N L
Sbjct: 229 LQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYNQFTTLPKEIGKLQNLQRLELNYNQL 288

Query: 311 RTL 313
           +TL
Sbjct: 289 KTL 291



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 149/315 (47%), Gaps = 15/315 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ L++S N    +P EIG    L + + + NQL  LP  +G+  NL      +N  T L
Sbjct: 48  VRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTIL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + +L +  N+LT L N  I     L  L  + N    +P+ IG L  L  L
Sbjct: 108 PKEVEKLENLKELYLGSNQLTTLPNE-IGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTL 166

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L  N++ ++P+ I    +L   Y+G+N L+ALP E+G+L  L +L L +N+L     E 
Sbjct: 167 NLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEI 226

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  L L +N L+ LP EIG++  L+ L L  N   TL   +  G    L      
Sbjct: 227 GQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYNQFTTLPKEI--GKLQNL-----Q 279

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
           RL  N +   +  K   I     L      L L     + +P EI +   + +L L  N 
Sbjct: 280 RLELNYNQLKTLPKG--IGQLQNLQW----LDLGYNQFTILPEEIGKLKNLQELYLRDNQ 333

Query: 392 IQELPPELSSCASLQ 406
           +  +P E+    +LQ
Sbjct: 334 LTTIPEEIGQLQNLQ 348


>gi|321460320|gb|EFX71363.1| hypothetical protein DAPPUDRAFT_60262 [Daphnia pulex]
          Length = 481

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 167/368 (45%), Gaps = 61/368 (16%)

Query: 14  LNLSNRSLRDVPNEVYKN--------FDEAGEGD---KWWEAVDLQKLILAHNNIEKLKE 62
           L+  + SL DVP EV+ +         D     D     +    L++L L+ N I  L  
Sbjct: 14  LDYEHSSLSDVPAEVFNHERTLEILRLDCNQIADLPRPLFHCHGLKELWLSDNEIALLPP 73

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD-------------- 108
            L +L  L VL+VS N L+E+P AI  L  L  LD+S N + K+P+              
Sbjct: 74  ALASLIHLQVLDVSKNSLTEVPDAISGLKALIILDLSVNPLGKLPEGATKLLSLESLNLS 133

Query: 109 ---------EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
                      G  T L   +   NQL  LP S+ R   L       N +  LPE +   
Sbjct: 134 DTFLEFLPANFGRLTKLRLLELRENQLATLPKSMARLTALKRLDMGQNDLCDLPEVVGSI 193

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG--------------------- 198
             +++L V+GNKL VL    +     L  L AS+N L+G                     
Sbjct: 194 PSLTELWVDGNKLDVLP-EFVGHLQNLVHLDASRNCLHGIAPTIGLCKSLTDLSLTSNNL 252

Query: 199 --MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +PE IG L+ L  L +  NR+  +P S+    +L E   G N LS LPA +G L KL 
Sbjct: 253 ANLPEEIGDLTLLTVLRVDDNRLTCLPDSVGRLSNLEELQAGQNRLSKLPASIGLLRKLE 312

Query: 257 TLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
           TL L+ N L+E  VE  +CQ RL+VL L  N L  LPPE+G ++ LR + L+ N L  L 
Sbjct: 313 TLMLNENLLEELPVELGSCQ-RLTVLSLRKNRLEHLPPEMGHLSRLRVVNLSCNRLLHLP 371

Query: 315 SSLVNGPT 322
            S +  P+
Sbjct: 372 VSFLKLPS 379


>gi|383872300|ref|NP_001244517.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|355783099|gb|EHH65020.1| hypothetical protein EGM_18359 [Macaca fascicularis]
 gi|380784083|gb|AFE63917.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|383421817|gb|AFH34122.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|384943642|gb|AFI35426.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
          Length = 582

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 205/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  L+ CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 179/382 (46%), Gaps = 70/382 (18%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCV------------- 270
           S+S C +L E  + NN +S LP   L  L KL +L L  N  + Y V             
Sbjct: 302 SLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 271 -EACQLR------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR--- 314
            E  ++             LS L++ +N L+ LP + G  T++ +L L  N L  +    
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           S LV+     L   L  +LP              +    +L    +EL LE   L ++P+
Sbjct: 422 SGLVSLEVLILSNNLLKKLPHG------------LGNLRKL----RELDLEENKLESLPN 465

Query: 375 EIWEAGEITKLDLSRNSIQELP 396
           EI    ++ KL L+ N +  LP
Sbjct: 466 EIAYLKDLQKLVLTNNQLTTLP 487



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 2/202 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSL 317
            +++L +L L  N L  +  SL
Sbjct: 282 NLSSLSRLGLRYNRLSAIPRSL 303



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 199

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   ++LS+    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSKLSM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ +C   Q+   DL  N+
Sbjct: 247 HNQLEHLPKEIGNCT--QITNLDLQHNE 272


>gi|418712107|ref|ZP_13272852.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116140|ref|ZP_15576529.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012306|gb|EKO70408.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410791374|gb|EKR85050.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 358

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 28/309 (9%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y++  +A     +   +D++ LIL+   ++ L E +  L  L +L++S N+L  LP  I
Sbjct: 15  IYRDLTKA-----FQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEI 69

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +++N     P EI    +L K   S+NQL  LP  +G+  NL +    NN
Sbjct: 70  RQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNN 129

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLT---------------VLSNNLIASWTM------- 185
            + ++ +++     + KL ++ N+LT                LSNN + ++         
Sbjct: 130 QLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQN 189

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL  S N L   P+ IG L +L  L L  N++ +IP+ I     L E  +  N L+ +
Sbjct: 190 LQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTI 249

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P E+G+L  L  L L  NQ K   VE  QL+ L +L L  N L+ LP EIGK+  L+ L 
Sbjct: 250 PKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLN 309

Query: 305 LTGNPLRTL 313
           L  N L T+
Sbjct: 310 LDANQLITI 318



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 155/364 (42%), Gaps = 64/364 (17%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ L +S   +  +P++IG    L   D S NQL  LP  + +  NL +   + N   + 
Sbjct: 29  VRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTF 88

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + KL +  N+LT+L                        P  IG L  L  L
Sbjct: 89  PKEIEQLKSLHKLYLSNNQLTIL------------------------PVEIGQLQNLQEL 124

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L  N++ +I   I    +L + Y+ NN L+A P E+GKL  L +L L +NQL  +  E 
Sbjct: 125 NLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEI 184

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            +L+ L  L LSNN L+  P EIGK+  L+ L L  N L T+         P  +  L+ 
Sbjct: 185 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTI---------PNEIGKLQK 235

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTS-------------------KELSLEGMNLSAI 372
               N D    TT    I     L V                     K LSL+   L+A+
Sbjct: 236 LQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTAL 295

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV------KFSDLVTNKESC---ISGC 423
           P EI +   +  L+L  N +  +P E+    +LQ       +FS  +  KE     +  C
Sbjct: 296 PKEIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFS--IEEKERIRKLLPKC 353

Query: 424 YLYW 427
            +Y+
Sbjct: 354 QIYF 357



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 139/301 (46%), Gaps = 43/301 (14%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           ++  ++   L LSN  L  +P E+              +  +LQ+L L +N ++ + +++
Sbjct: 92  IEQLKSLHKLYLSNNQLTILPVEI-------------GQLQNLQELNLWNNQLKTISKEI 138

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L + +N+L+  P  IG+L  LKSL +S N +   P EIG    L +   S+N
Sbjct: 139 EQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNN 198

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL   P  +G+   L      +N +T++P ++    K+ +L+++ N+LT           
Sbjct: 199 QLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTT---------- 248

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
                         +P+ IG L  L  L L  N+  +IP       +L    +  N L+A
Sbjct: 249 --------------IPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTA 294

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+GKL  L  L+L +NQL     E  QL+ L  L L NN  S     I +   +RKL
Sbjct: 295 LPKEIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFS-----IEEKERIRKL 349

Query: 304 L 304
           L
Sbjct: 350 L 350


>gi|418702924|ref|ZP_13263816.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767468|gb|EKR38143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 358

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 28/309 (9%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y++  +A     +   +D++ LIL+   ++ L E +  L  L +L++S N+L  LP  I
Sbjct: 15  IYRDLTKA-----FQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEI 69

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +++N     P EI    +L K   S+NQL  LP  +G+  NL +    NN
Sbjct: 70  RQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNN 129

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTV---------------LSNNLIASWTM------- 185
            + ++ +++     + KL ++ N+LT                LSNN + ++         
Sbjct: 130 QLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQN 189

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL  S N L   P+ IG L +L  L L  N++ +IP+ I     L E  +  N L+ +
Sbjct: 190 LQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTI 249

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P E+G+L  L  L L  NQ K   VE  QL+ L +L L  N L+ LP EIGK+  L+ L 
Sbjct: 250 PKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLN 309

Query: 305 LTGNPLRTL 313
           L  N L T+
Sbjct: 310 LDANQLITI 318



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 154/364 (42%), Gaps = 64/364 (17%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ L +S   +  +P++IG    L   D S NQL  LP  + +  NL +   + N   + 
Sbjct: 29  VRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTF 88

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + KL +  N+LT+L                        P  IG L  L  L
Sbjct: 89  PKEIEQLKSLHKLYLSNNQLTIL------------------------PVEIGQLQNLQEL 124

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L  N++ +I   I    +L + Y+ NN L+A P E+GKL  L  L L +NQL  +  E 
Sbjct: 125 NLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEI 184

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            +L+ L  L LSNN L+  P EIGK+  L+ L L  N L T+         P  +  L+ 
Sbjct: 185 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTI---------PNEIGKLQK 235

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTS-------------------KELSLEGMNLSAI 372
               N D    TT    I     L V                     K LSL+   L+A+
Sbjct: 236 LQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTAL 295

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV------KFSDLVTNKESC---ISGC 423
           P EI +   +  L+L  N +  +P E+    +LQ       +FS  +  KE     +  C
Sbjct: 296 PKEIGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFS--IEEKERIRKLLPKC 353

Query: 424 YLYW 427
            +Y+
Sbjct: 354 QIYF 357



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 110/220 (50%), Gaps = 1/220 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L +N ++ + +++  L  L  L + +N+L+  P  IG+L  L+ L +S N +  
Sbjct: 120 NLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTT 179

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L +   S+NQL   P  +G+   L      +N +T++P ++    K+ +L
Sbjct: 180 FPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQEL 239

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ N+LT +    I     L  L  S N    +P   G L  L  L L  N++ ++P  
Sbjct: 240 NLDVNQLTTIPKE-IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE 298

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           I    +L    +  N L  +P E+G+L  L TL L +NQ 
Sbjct: 299 IGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQF 338



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 13/162 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LSN  L   P E+       G+  K      LQ L L  N +  +  ++  L  L  
Sbjct: 192 ELYLSNNQLTTFPKEI-------GKLQK------LQWLGLGDNQLTTIPNEIGKLQKLQE 238

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ +P  IG+L  L+ L +S+N    IP E G    L      +NQL  LP  
Sbjct: 239 LNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE 298

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +G+  NL       N + ++P+++     +  L +  N+ ++
Sbjct: 299 IGKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFSI 340


>gi|71991531|ref|NP_001023851.1| Protein LET-413, isoform b [Caenorhabditis elegans]
 gi|76803776|sp|O61967.3|LAP1_CAEEL RecName: Full=Protein lap1; AltName: Full=Lethal protein 413
 gi|351062135|emb|CCD70054.1| Protein LET-413, isoform b [Caenorhabditis elegans]
          Length = 699

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 185/365 (50%), Gaps = 17/365 (4%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           + +N++ +  D+     L  LN++ N + EL   +  L  L+ LDVS N +  +P EIG+
Sbjct: 21  SQSNLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGN 80

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            T L++ + + N + +LP ++  C  L+    S+N  T LPE + +CS ++ L +    L
Sbjct: 81  LTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSL 140

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           T+L +N I S T L  L A  NLL  +P +I  L +L  LDL QN + ++P+ I    SL
Sbjct: 141 TLLPSN-IGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSL 199

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
            EFY+  N+L++LP  +     L  LD+  NQ+        ++  L+ L++S N +  LP
Sbjct: 200 REFYVDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELP 259

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
              G++  L+ L    N L  L S +  G   +L +     L +N  ++   T  DL  +
Sbjct: 260 SSFGELKRLQMLKADRNSLHNLTSEI--GKCQSLTELY---LGQNFLTDLPDTIGDLRQL 314

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
            T        L+++  NLS IP  I     +T L L +N + ELP  +  C +L V   D
Sbjct: 315 TT--------LNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVL--D 364

Query: 412 LVTNK 416
           + +NK
Sbjct: 365 VASNK 369



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 143/289 (49%), Gaps = 27/289 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N+I KL + ++N  LLT LN+S N  + LP  I E   +  L ++  S+  +
Sbjct: 84  LIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLL 143

Query: 107 PDEIGSAT-----------------------ALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P  IGS T                        L + D   N+L+ LP+ +G+  +L +F 
Sbjct: 144 PSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFY 203

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
              N +TSLP+ ++ C  + +LDV  N++  L  NL      LT+L  S N +  +P + 
Sbjct: 204 VDINSLTSLPDSISGCRMLDQLDVSENQIIRLPENL-GRMPNLTDLNISINEIIELPSSF 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L RL  L   +N + ++ S I  C SL E Y+G N L+ LP  +G L +L TL++  N
Sbjct: 263 GELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCN 322

Query: 264 QLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L +    +  C+  L+VL L  N L+ LP  IGK   L  L +  N L
Sbjct: 323 NLSDIPDTIGNCK-SLTVLSLRQNILTELPMTIGKCENLTVLDVASNKL 370



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 1/176 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L ++ N I +L E+L  +P LT LN+S N++ ELP++ GEL  L+ L    NS+  +
Sbjct: 222 LDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNL 281

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
             EIG   +L +     N L +LP ++G    L+      N ++ +P+ + +C  ++ L 
Sbjct: 282 TSEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLS 341

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           +  N LT L    I     LT L  + N L  +P T+  L +L  L L +N+  SI
Sbjct: 342 LRQNILTELPMT-IGKCENLTVLDVASNKLPHLPFTVKVLYKLQALWLSENQTQSI 396


>gi|291240350|ref|XP_002740092.1| PREDICTED: PDZ-domain protein scribble-like [Saccoglossus
           kowalevskii]
          Length = 1630

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 185/395 (46%), Gaps = 33/395 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+LQKL L+ NNIE++   + NL  L  L++ +N LS +P  +G+L  L  L++S N + 
Sbjct: 117 VNLQKLDLSVNNIEEIPRTILNLCALQELDLHYNMLSTIPCEVGQLVHLTDLNLSQNQLT 176

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P  +G+   L     S N+L  +   +G  + L     S N I  +P  +     +  
Sbjct: 177 ELPITLGNLKRLQSLRVSDNKLLSVSMEIGMLVELRTLDLSKNEIVEIPSSIGKLKSLKM 236

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L ++ NKLT L  + I     L E+  S N +   PE+IG L  L  L+   N++  +P 
Sbjct: 237 LHIDRNKLTNLPID-IGKLKNLQEINMSMNKILDFPESIGGLVNLQFLNAKNNQLKCLPV 295

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQL------- 275
           S      L E  + NN + +LP  +GKL  L  LD+  N L+     +  C L       
Sbjct: 296 SFVNLSKLREVNVSNNYIESLPRSIGKLKDLKYLDISHNHLESLPPSIGECILVSKHVIT 355

Query: 276 ------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                  L+ L +  N +  LP EIG +++L  L++  NP+R     + N     L KY 
Sbjct: 356 CWKMLRELTSLKMMRNQIKVLPREIGYLSSLSTLVIDDNPIREPPMVICNEGILGLQKYW 415

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           + +     D E          +   +   S+++SL+  +L+ IP  I +   I +LDLSR
Sbjct: 416 QKK-----DQE----------LLKNVKPNSEKVSLKQNDLTYIPKSISQYTHIQQLDLSR 460

Query: 390 NSIQELPPELSSCASLQVKFSDLVTNKESCISGCY 424
           N +  LP E+  C   Q++  D+  N    + G +
Sbjct: 461 NKLSYLPLEM--CQLTQLENLDISNNNLIDLPGSF 493



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 183/407 (44%), Gaps = 57/407 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+ L L+ N I ++   +  L  L +L++  NKL+ LP  IG+L  L+ +++S N I+
Sbjct: 209 VELRTLDLSKNEIVEIPSSIGKLKSLKMLHIDRNKLTNLPIDIGKLKNLQEINMSMNKIL 268

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P+ IG    L   +  +NQLK LP S      L +   SNN I SLP  +     +  
Sbjct: 269 DFPESIGGLVNLQFLNAKNNQLKCLPVSFVNLSKLREVNVSNNYIESLPRSIGKLKDLKY 328

Query: 165 LDVEGNKL----------TVLSNNLIASWTMLTELIASK---NLLNGMPETIGSLSRLIR 211
           LD+  N L           ++S ++I  W ML EL + K   N +  +P  IG LS L  
Sbjct: 329 LDISHNHLESLPPSIGECILVSKHVITCWKMLRELTSLKMMRNQIKVLPREIGYLSSLST 388

Query: 212 LDLHQNRILSIPSSI--SGCCSLAEFY-------------------MGNNALSALPAELG 250
           L +  N I   P  I   G   L +++                   +  N L+ +P  + 
Sbjct: 389 LVIDDNPIREPPMVICNEGILGLQKYWQKKDQELLKNVKPNSEKVSLKQNDLTYIPKSIS 448

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           + + +  LDL  N+L    +E CQL +L  LD+SNN+L  LP   G  + L+ L L+ N 
Sbjct: 449 QYTHIQQLDLSRNKLSYLPLEMCQLTQLENLDISNNNLIDLP---GSFSDLKILNLSRNN 505

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L     +L N                 +  + S      I +   LS  +  +++    L
Sbjct: 506 LTEFPDNLENI----------------QQIDISQNCLQNIHIGMNLSKLT-HVNMRDTKL 548

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
              P ++  A E+  L+LS N+I+E+PP +  C   ++   D+  NK
Sbjct: 549 KNFPLQLCSASELYHLNLSCNNIEEIPPGI--CNLQRLAIIDVCENK 593



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 170/366 (46%), Gaps = 25/366 (6%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           ++Q++ ++ N ++ +   + NL  LT +N+   KL   P  +     L  L++S N+I +
Sbjct: 515 NIQQIDISQNCLQNIHIGM-NLSKLTHVNMRDTKLKNFPLQLCSASELYHLNLSCNNIEE 573

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP  I +   L   D   N+++ +P  +G    L +   SNN I ++PE L    +++ L
Sbjct: 574 IPPGICNLQRLAIIDVCENKIRSIPKEIGNMNRLKELHISNNKIGNIPEPLCKLRELTLL 633

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N L  L          L  L  S N+ N  P  I  L++L++L L  N + SIPS+
Sbjct: 634 DIRNNNLKELPPQF-GELHELQILQLSGNVFNEFPPAISKLTKLVKLYLSGNNMTSIPST 692

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ----LKEYCVEACQLRLSVLD 281
           I    SL E  +  N ++ LPAEL +L ++  L L  NQ    LK++  E  +L+     
Sbjct: 693 IGRLKSLEEMSIDGNIITELPAELLEL-QIIKLQLIENQQDTPLKDFVAELSRLK----- 746

Query: 282 LSNNSLSGLPPE-IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
             N S   + P  I + + L  + +TG  ++T  SS             ++   + +++ 
Sbjct: 747 -QNGSTVAISPRIINRNSKLNSICVTG--IKTGVSS---------TDVCKNVCMKGQNAI 794

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                E  I    RL   + ++     +L  +P  I    E+ KL+L  N +  LP E+S
Sbjct: 795 KKMWDELDIETLRRLEEDTSDIDFANRDLQKLPGVIGRFAELKKLNLKSNHLDTLPEEVS 854

Query: 401 SCASLQ 406
           +  SL+
Sbjct: 855 NLTSLE 860



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 160/329 (48%), Gaps = 22/329 (6%)

Query: 79  KLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLN 138
           KL+ LP +I E    + L++  NS   +P EI     L + + S N ++ +P SL +   
Sbjct: 35  KLASLPPSIAEYKDCERLNLRCNSFSTLPPEISHLKKLNELNLSENCIENIPMSLYKLTA 94

Query: 139 LSDFKAS-NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           L+    + N  I  L  D++    + KLD+  N +  +    I +   L EL    N+L+
Sbjct: 95  LTVLNMNGNEIIGKLQPDISKLVNLQKLDLSVNNIEEIPRT-ILNLCALQELDLHYNMLS 153

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +P  +G L  L  L+L QN++  +P ++     L    + +N L ++  E+G L +L T
Sbjct: 154 TIPCEVGQLVHLTDLNLSQNQLTELPITLGNLKRLQSLRVSDNKLLSVSMEIGMLVELRT 213

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           LDL  N++ E      +L+ L +L +  N L+ LP +IGK+  L+++ ++ N +     S
Sbjct: 214 LDLSKNEIVEIPSSIGKLKSLKMLHIDRNKLTNLPIDIGKLKNLQEINMSMNKILDFPES 273

Query: 317 ---LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              LVN      L++L ++     +++        + ++       +E+++    + ++P
Sbjct: 274 IGGLVN------LQFLNAK-----NNQLKCLPVSFVNLSKL-----REVNVSNNYIESLP 317

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSC 402
             I +  ++  LD+S N ++ LPP +  C
Sbjct: 318 RSIGKLKDLKYLDISHNHLESLPPSIGEC 346



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 138/312 (44%), Gaps = 59/312 (18%)

Query: 27   EVYKNFDEAGEG--DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP 84
            +V KN    G+    K W+ +D++ L        +L+ED  ++      + ++  L +LP
Sbjct: 781  DVCKNVCMKGQNAIKKMWDELDIETL-------RRLEEDTSDI------DFANRDLQKLP 827

Query: 85   AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKA 144
              IG    LK L++  N +  +P+E+ + T+L   + + N  +  PS L    NL     
Sbjct: 828  GVIGRFAELKKLNLKSNHLDTLPEEVSNLTSLESLNLADNSFENYPSVLSHLENLVTLNL 887

Query: 145  SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA------------- 191
            ++N +T++   L +   + +LD   N L  + N  ++  + LT  I              
Sbjct: 888  NHNKLTAMHISLVN---IKELDASHNNLVAIPNT-VSQASQLTNKINDDPSITLDLKSLK 943

Query: 192  ----SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
                + N L  +P ++ SL  L  LD+  N++  IP  I    +L E Y+ NN +  +P 
Sbjct: 944  VLRLTHNKLTSIP-SVDSLLELTVLDISDNKLQKIPKQIRILKNLKELYLSNNEIKTVPC 1002

Query: 248  ELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
            E+  L++L                        LD+SNN L  LPPEI  MT L+ L +  
Sbjct: 1003 EITHLTELHE----------------------LDISNNELEHLPPEIDNMTNLQSLYIQR 1040

Query: 308  NPLRTLRSSLVN 319
            N L  L  ++V+
Sbjct: 1041 NRLMELPRTIVH 1052



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 178/444 (40%), Gaps = 100/444 (22%)

Query: 47   LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
            L++L +++N I  + E L  L  LT+L++ +N L ELP   GELH L+ L +S N   + 
Sbjct: 607  LKELHISNNKIGNIPEPLCKLRELTLLDIRNNNLKELPPQFGELHELQILQLSGNVFNEF 666

Query: 107  PDEIGSATALVKFDCSSNQ-----------------------LKELPSSL---------- 133
            P  I   T LVK   S N                        + ELP+ L          
Sbjct: 667  PPAISKLTKLVKLYLSGNNMTSIPSTIGRLKSLEEMSIDGNIITELPAELLELQIIKLQL 726

Query: 134  ----------GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS------- 176
                           LS  K + + +   P  +   SK++ + V G K  V S       
Sbjct: 727  IENQQDTPLKDFVAELSRLKQNGSTVAISPRIINRNSKLNSICVTGIKTGVSSTDVCKNV 786

Query: 177  -----NNLIASWTML------------TELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
                 N +   W  L            +++  +   L  +P  IG  + L +L+L  N +
Sbjct: 787  CMKGQNAIKKMWDELDIETLRRLEEDTSDIDFANRDLQKLPGVIGRFAELKKLNLKSNHL 846

Query: 220  LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV 279
             ++P  +S   SL    + +N+    P+ L  L  L TL+L+ N+L    +    ++   
Sbjct: 847  DTLPEEVSNLTSLESLNLADNSFENYPSVLSHLENLVTLNLNHNKLTAMHISLVNIK--E 904

Query: 280  LDLSNNSLSGLPPEIGK-----------------MTTLRKLLLTGNPLRTLRSSLVNGPT 322
            LD S+N+L  +P  + +                 + +L+ L LT N L ++ S       
Sbjct: 905  LDASHNNLVAIPNTVSQASQLTNKINDDPSITLDLKSLKVLRLTHNKLTSIPS------V 958

Query: 323  PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
             +LL+     + +N        K   I    R+    KEL L    +  +P EI    E+
Sbjct: 959  DSLLELTVLDISDN--------KLQKIPKQIRILKNLKELYLSNNEIKTVPCEITHLTEL 1010

Query: 383  TKLDLSRNSIQELPPELSSCASLQ 406
             +LD+S N ++ LPPE+ +  +LQ
Sbjct: 1011 HELDISNNELEHLPPEIDNMTNLQ 1034



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 1/124 (0%)

Query: 47   LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
            L+ L L HN +  +   + +L  LTVL++S NKL ++P  I  L  LK L +S N I  +
Sbjct: 942  LKVLRLTHNKLTSIPS-VDSLLELTVLDISDNKLQKIPKQIRILKNLKELYLSNNEIKTV 1000

Query: 107  PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            P EI   T L + D S+N+L+ LP  +    NL       N +  LP  +     +  +D
Sbjct: 1001 PCEITHLTELHELDISNNELEHLPPEIDNMTNLQSLYIQRNRLMELPRTIVHIDNLKYID 1060

Query: 167  VEGN 170
              GN
Sbjct: 1061 ASGN 1064



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 25/192 (13%)

Query: 13   SLNLSNRSLRDVP-------NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNI-------- 57
            SLNL++ S  + P       N V  N +           V++++L  +HNN+        
Sbjct: 861  SLNLADNSFENYPSVLSHLENLVTLNLNHNKLTAMHISLVNIKELDASHNNLVAIPNTVS 920

Query: 58   ------EKLKED---LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
                   K+ +D     +L  L VL ++HNKL+ +P+ +  L  L  LD+S N + KIP 
Sbjct: 921  QASQLTNKINDDPSITLDLKSLKVLRLTHNKLTSIPS-VDSLLELTVLDISDNKLQKIPK 979

Query: 109  EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            +I     L +   S+N++K +P  +     L +   SNN +  LP ++ + + +  L ++
Sbjct: 980  QIRILKNLKELYLSNNEIKTVPCEITHLTELHELDISNNELEHLPPEIDNMTNLQSLYIQ 1039

Query: 169  GNKLTVLSNNLI 180
             N+L  L   ++
Sbjct: 1040 RNRLMELPRTIV 1051



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 1/115 (0%)

Query: 45   VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            ++L  L ++ N ++K+ + +R L  L  L +S+N++  +P  I  L  L  LD+S N + 
Sbjct: 962  LELTVLDISDNKLQKIPKQIRILKNLKELYLSNNEIKTVPCEITHLTELHELDISNNELE 1021

Query: 105  KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS-NNCITSLPEDLAD 158
             +P EI + T L       N+L ELP ++    NL    AS N+ +   P D+ D
Sbjct: 1022 HLPPEIDNMTNLQSLYIQRNRLMELPRTIVHIDNLKYIDASGNSSMREPPADVCD 1076


>gi|418702265|ref|ZP_13263176.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|418717513|ref|ZP_13277175.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116459|ref|ZP_15576844.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|421125803|ref|ZP_15586047.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136751|ref|ZP_15596848.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410011919|gb|EKO70025.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410018933|gb|EKO85761.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410436455|gb|EKP85567.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410758784|gb|EKR25010.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410787110|gb|EKR80845.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455790756|gb|EMF42603.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 315

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 135/284 (47%), Gaps = 30/284 (10%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           VY N  EA +  K     D+++L LA   +  L +++  L  L  LN+  N+L+ LP  I
Sbjct: 41  VYHNLTEALQNPK-----DVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEI 95

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +SFN    +P EI     L   D + N+L  LP  + +   L   +  NN
Sbjct: 96  AQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNN 155

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + +LP+++     +  L + GN+LT L                        PE I  L 
Sbjct: 156 QLANLPQEITQLQNLELLFLSGNRLTTL------------------------PEEIAQLR 191

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L RL ++ NR  + P  I+    L    +G N L+ LP E+G+L  L  L L  NQL  
Sbjct: 192 SLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAI 251

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              E  QL+ L  L LS N L+ LP EIG++  L+ L+L GNP+
Sbjct: 252 LPEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPI 295



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 118/240 (49%), Gaps = 6/240 (2%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           V HN    L  A+     ++ LD++   +  +  EIG    L K +  SN+L  LP  + 
Sbjct: 41  VYHN----LTEALQNPKDVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIA 96

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           +  NL   + S N  T+LP+++     +  LD+  N+LT L    IA +  L  L    N
Sbjct: 97  QLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEE-IAQFQKLQWLRLDNN 155

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P+ I  L  L  L L  NR+ ++P  I+   SL   Y+  N  +  P E+ +L K
Sbjct: 156 QLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQK 215

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL  NQL     E  +L+ L  L L  N L+ LP EI ++  L+ L+L+GN L TL
Sbjct: 216 LQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTL 275



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 126/285 (44%), Gaps = 22/285 (7%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           +L E L +   + +LD+    LT L    I     L +L    N L  +PE I  L  L 
Sbjct: 44  NLTEALQNPKDVRQLDLAAKGLTTLLKE-IGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQ 102

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           RL L  N+  ++P  I    +L    + +N L+ LP E+ +  KL  L L +NQL     
Sbjct: 103 RLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLANLPQ 162

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E  QL+ L +L LS N L+ LP EI ++ +L++L + GN   T          P  +  L
Sbjct: 163 EITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTF---------PEEITQL 213

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           +     +      TT    I     L    K L L G  L+ +P EI +   +  L LS 
Sbjct: 214 QKLQGLDLGGNQLTTLPKEIGRLQNL----KALHLGGNQLAILPEEITQLQNLQTLILSG 269

Query: 390 NSIQELPPELSSCASLQ---VKFSDLVTNKESCISG----CYLYW 427
           N +  LP E+    +LQ   +K + +V+ +   I      C +Y+
Sbjct: 270 NQLTTLPKEIGRLQNLQTLILKGNPIVSKERQRIQQLLPKCTIYF 314



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 50/105 (47%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L +  N      E++  L  L  L++  N+L+ LP  IG L  LK+L +  N +  +
Sbjct: 193 LQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAIL 252

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           P+EI     L     S NQL  LP  +GR  NL       N I S
Sbjct: 253 PEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPIVS 297


>gi|170586680|ref|XP_001898107.1| PDZ-domain protein scribble [Brugia malayi]
 gi|158594502|gb|EDP33086.1| PDZ-domain protein scribble, putative [Brugia malayi]
          Length = 1245

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 154/302 (50%), Gaps = 20/302 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    + D+P E+ KN             + L+ L L+ N I +L + +  L  +T L
Sbjct: 88  LNLKGNDVSDLPEEI-KN------------CIQLKILDLSSNPITRLPQTITQLTSMTSL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+++P  IG L  L+SL+V  N +  +P  I     L + D   N+L +LP+ +
Sbjct: 135 GLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEI 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL +     N + +LPE +  C  + +LDV  NKL VL +  I     L +L  ++
Sbjct: 195 GMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMVLPDE-IGDLEKLDDLTVAQ 253

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  +  LS +++ D  +N I  +  +I  C +L E Y+  N L+ +P+ LG L 
Sbjct: 254 NCLQVLPRRLKKLS-ILKAD--RNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLK 310

Query: 254 KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            L TL+L  NQLKE    +  C   LSVL L +N +  LP EIG++  LR L +  N L 
Sbjct: 311 SLRTLNLDKNQLKELPPTIGGCT-SLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLN 369

Query: 312 TL 313
            L
Sbjct: 370 YL 371



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 180/380 (47%), Gaps = 36/380 (9%)

Query: 21  LRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL 80
           L+ +P+++ +N            A  L+++ L  N+I+ L + L     L +L++S N++
Sbjct: 25  LQSIPHDIDRN------------ARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEV 72

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
             LP+ I  L  L+ L++  N +  +P+EI +   L   D SSN +  LP ++ +  +++
Sbjct: 73  IRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMT 132

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               ++  +T +P D+     +  L+V  N L  +  + I+    L  L    N L+ +P
Sbjct: 133 SLGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPS-ISELNQLRRLDLGHNELDDLP 191

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             IG L  L  L + QN + ++P SI  C SL +  +  N L  LP E+G L KL  L +
Sbjct: 192 NEIGMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMVLPDEIGDLEKLDDLTV 251

Query: 261 HSNQLKEYCVEACQLR---LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
             N     C++    R   LS+L    N+++ L P IG    L ++ LT N L  + SSL
Sbjct: 252 AQN-----CLQVLPRRLKKLSILKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSL 306

Query: 318 VNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
            N      LK LR+  L +N+  E   T    I   T LSV    LSL    +  +P EI
Sbjct: 307 GN------LKSLRTLNLDKNQLKELPPT----IGGCTSLSV----LSLRDNLIEQLPLEI 352

Query: 377 WEAGEITKLDLSRNSIQELP 396
                +  LD+  N +  LP
Sbjct: 353 GRLENLRVLDVCNNRLNYLP 372



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 154/354 (43%), Gaps = 42/354 (11%)

Query: 56  NIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N++ +  D+ RN   L  + +  N + +L   +     LK L +S N ++++P +I   T
Sbjct: 24  NLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEVIRLPSDIAHLT 83

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L + +   N + +LP  +  C+ L     S+N IT LP+ +   + M+ L +    LT 
Sbjct: 84  YLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMTSLGLNDISLT- 142

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
                                   MP  IG L  L  L++ +N + ++P SIS    L  
Sbjct: 143 -----------------------QMPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRR 179

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 293
             +G+N L  LP E+G L  L  L +  N L+       Q R L  LD+S N L  LP E
Sbjct: 180 LDLGHNELDDLPNEIGMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMVLPDE 239

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           IG +  L  L +  N L+ L         P  LK L S L    D  A T     I    
Sbjct: 240 IGDLEKLDDLTVAQNCLQVL---------PRRLKKL-SIL--KADRNAITQLTPAIGSCH 287

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            L+    E+ L    L+ IPS +     +  L+L +N ++ELPP +  C SL V
Sbjct: 288 ALT----EIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSV 337



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 106/218 (48%), Gaps = 4/218 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L HN ++ L  ++  L  L  L V  N L  LP +I +   L+ LDVS N +M +
Sbjct: 177 LRRLDLGHNELDDLPNEIGMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMVL 236

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PDEIG    L     + N L+ LP  L +   LS  KA  N IT L   +  C  ++++ 
Sbjct: 237 PDEIGDLEKLDDLTVAQNCLQVLPRRLKK---LSILKADRNAITQLTPAIGSCHALTEIY 293

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N LT + ++L  +   L  L   KN L  +P TIG  + L  L L  N I  +P  I
Sbjct: 294 LTENLLTEIPSSL-GNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEI 352

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
               +L    + NN L+ LP  +  L KL  L L  NQ
Sbjct: 353 GRLENLRVLDVCNNRLNYLPFTVNVLFKLRALWLSENQ 390



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 121/264 (45%), Gaps = 25/264 (9%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++  LD     L  + +++  +   L E+    N +  + + +    +L  L L +N ++
Sbjct: 14  QVDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEVI 73

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
            +PS I+    L E  +  N +S LP E+    +L  LDL SN +        QL  ++ 
Sbjct: 74  RLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMTS 133

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L++ SL+ +P +IG +  LR L +  N LRT+  S+       L +  R  L  NE  
Sbjct: 134 LGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSISE-----LNQLRRLDLGHNE-- 186

Query: 340 EASTTKEDL---ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                 +DL   I M   L    +EL ++  +L A+P  I +   + +LD+S N +  LP
Sbjct: 187 -----LDDLPNEIGMLENL----EELYVDQNDLEALPESIVQCRSLEQLDVSENKLMVLP 237

Query: 397 PELSSCASLQVKFSDLVTNKESCI 420
            E+     L     D +T  ++C+
Sbjct: 238 DEIGDLEKL-----DDLTVAQNCL 256


>gi|324509731|gb|ADY44080.1| Protein lap1, partial [Ascaris suum]
          Length = 634

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 155/321 (48%), Gaps = 23/321 (7%)

Query: 1   MDRILKAARTSGSL------NLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAH 54
            ++IL+     GSL      +L +  L D+P E+ K               +L+ L L  
Sbjct: 69  QNKILRVPPAIGSLIALEELHLEDNELSDLPEELVK-------------CSNLKILDLRL 115

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N + +L + +  L  LT L +    L++LP  I +L  L+SLDV  N +  +P  I    
Sbjct: 116 NLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLK 175

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L + D   N+L  LP ++G    L D    +N ++++P+ L  C  +  LDV  N LT 
Sbjct: 176 HLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTA 235

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I     L EL  ++N +  +P +IG L  L+ L    N +  +  +I  C SL E
Sbjct: 236 LPKE-IGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSSLLE 294

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPP 292
            Y+ NN L+ LPA +G L +L  L +  NQL+E    +  C  +LS+L L  N L  LP 
Sbjct: 295 LYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGCS-KLSILTLRGNRLRELPL 353

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           E+G++  LR L L  N L  L
Sbjct: 354 EVGRLANLRVLDLCDNILAFL 374



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 2/261 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L   ++ +L  D+  L  L  L+V  N+L  LP AI +L  L+ LD+  N +  +
Sbjct: 131 LTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHL 190

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +GS   L       N L  +P SL  C +L     S N +T+LP+++ D  ++ +L 
Sbjct: 191 PLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELS 250

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N++  L N+ I     L  L A  N L  +  TIG  S L+ L L  N++ ++P++I
Sbjct: 251 IAENRIAALPNS-IGRLKNLVTLKADSNALTELVPTIGECSSLLELYLFNNQLTTLPATI 309

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
            G   L+   +  N L  +P+ +G  SKL  L L  N+L+E  +E  +L  L VLDL +N
Sbjct: 310 GGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCDN 369

Query: 286 SLSGLPPEIGKMTTLRKLLLT 306
            L+ LP  I  +  LR L L+
Sbjct: 370 ILAFLPFTINVLFNLRALWLS 390



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 167/362 (46%), Gaps = 38/362 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N I ++ E L     L  L++  NK+  +P AIG L  L+ L +  N +  +
Sbjct: 39  LEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNELSDL 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+E+   + L   D   N L  LP  + R  +L+        +T LP D+     +  LD
Sbjct: 99  PEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLD 158

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N+L +L    I     L EL   +N L+ +P  +GSL  L  L +  N + ++P S+
Sbjct: 159 VRENQLRILP-PAICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSL 217

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
           + C  L    +  N L+ALP E+G L +L  L +  N++        +L+ L  L   +N
Sbjct: 218 TSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSN 277

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           +L+ L P IG+ ++L +L L  N L TL         PA +  L+               
Sbjct: 278 ALTELVPTIGECSSLLELYLFNNQLTTL---------PATIGGLKE-------------- 314

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                    LSV    LS++   L  IPS I    +++ L L  N ++ELP E+   A+L
Sbjct: 315 ---------LSV----LSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANL 361

Query: 406 QV 407
           +V
Sbjct: 362 RV 363



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 135/299 (45%), Gaps = 23/299 (7%)

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLN-LSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           G    + K  C+   L ELP+ + R  + L +     N I  +PE L  C K+  L +  
Sbjct: 13  GRVDVIEKRQCN---LHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRSLSLGQ 69

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           NK+  +    I S   L EL    N L+ +PE +   S L  LDL  N +  +P  ++  
Sbjct: 70  NKILRVPPA-IGSLIALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRL 128

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            SL   Y+   +L+ LP ++ +L  L +LD+  NQL+      CQL+ L  LDL  N LS
Sbjct: 129 SSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLRELDLGRNELS 188

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            LP  +G +  L  L +  N L  +  SL +        +LR+            ++ DL
Sbjct: 189 HLPLNMGSLEVLEDLYVDHNVLSAVPDSLTS------CGHLRT---------LDVSQNDL 233

Query: 349 ITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             +   +    +  ELS+    ++A+P+ I     +  L    N++ EL P +  C+SL
Sbjct: 234 TALPKEIGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSSL 292



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 48/97 (49%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L +L L +N +  L   +  L  L+VL++  N+L E+P+AIG    L  L +  N 
Sbjct: 288 ECSSLLELYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNR 347

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           + ++P E+G    L   D   N L  LP ++    NL
Sbjct: 348 LRELPLEVGRLANLRVLDLCDNILAFLPFTINVLFNL 384


>gi|442618954|ref|NP_001262546.1| flyers-cup, isoform H [Drosophila melanogaster]
 gi|440217398|gb|AGB95928.1| flyers-cup, isoform H [Drosophila melanogaster]
          Length = 571

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 165/366 (45%), Gaps = 65/366 (17%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQKLI 51
           K AR SG+LNLSN++L  VP  +Y + +EA               E D WW  V L  L 
Sbjct: 61  KLARKSGTLNLSNKALARVPKRLY-DINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLD 119

Query: 52  LAHNNIEKLKEDLRNLPLLTVL-----------------------NVSHNKLSELPAAIG 88
           L+ N +  +   + NL  LTVL                       NVSHNKLS+LP A+ 
Sbjct: 120 LSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMY 179

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+ L++S+N  +++  +I     L   D   N ++ LP  +G  + L+      N 
Sbjct: 180 SLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNH 239

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I  LP DL +   + K+D+  N LT L                        PE +G L +
Sbjct: 240 IKELPPDLVNMRSLQKIDLMHNDLTSL------------------------PEDMGLLRK 275

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKE 267
           L  L L  N IL +P    G  +L E +  NN +  +P  +   L  L  LDL  N++ E
Sbjct: 276 LDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITE 334

Query: 268 YCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E C LR     D+SNN++S LP  +  +  L  L + GNP++T+R  ++   T  +L
Sbjct: 335 LPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRIL 394

Query: 327 KYLRSR 332
           K L  R
Sbjct: 395 KTLHDR 400


>gi|440797010|gb|ELR18105.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 950

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 192/383 (50%), Gaps = 19/383 (4%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            DL +L +A N++  L   L +L  L  LNVS N+L  L   +G+L  L+ LD+ FN ++
Sbjct: 164 ADLVELDVATNHLTALPAMLAHLSSLRRLNVSSNRLVHLGPQLGDLPDLERLDLRFNRLL 223

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++PDE+G    L       N L  LP++L     L     + N +  LP D      +++
Sbjct: 224 RLPDELGRLAQLNSLLLDHNDLASLPAALSTLSTLKLLSINENRLAHLPPDALALPALAE 283

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    +A+ T L  L  + NLL  +P  +G+L RL  L L  N +  +P+
Sbjct: 284 LSLRANRLTALPPEPLAALTALQTLDLAHNLLPFLPPALGTLPRLTNLFLGANLLTLLPT 343

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            + G   LAE  + +NAL  LPAELG++ KL  LD+ +NQL        QL +L +LD  
Sbjct: 344 ELCGLSQLAELELQDNALEELPAELGQMEKLAHLDVRNNQLTALPPSIGQLVKLRLLDAG 403

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N +S LPPE+  +++L +L L+GN +  L            L    ++L         +
Sbjct: 404 MNLISDLPPELYAVSSLARLSLSGNRISDLPEDFCRLTRLERLLLGYNQL---------S 454

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
           T    +   T L+V    LSL G  L+ +P  +++   + +L ++ N + ELP E+    
Sbjct: 455 TLPAGLNQLTHLTV----LSLSGNRLTTLPPVVFDLTWLKELYVAANGLTELPTEVGRLT 510

Query: 404 SLQVKFSDLVTNKESCIS---GC 423
           +L++   DL +N  + +    GC
Sbjct: 511 TLEIL--DLTSNHLTALPEELGC 531



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 149/316 (47%), Gaps = 30/316 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N +E+L  +L  +  L  L+V +N+L+ LP +IG+L  L+ LD   N I  +
Sbjct: 351 LAELELQDNALEELPAELGQMEKLAHLDVRNNQLTALPPSIGQLVKLRLLDAGMNLISDL 410

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+ + ++L +   S N++ +LP    R   L       N +++LP  L   + ++ L 
Sbjct: 411 PPELYAVSSLARLSLSGNRISDLPEDFCRLTRLERLLLGYNQLSTLPAGLNQLTHLTVLS 470

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+LT L   ++   T L EL  + N L  +P  +G L+ L  LDL  N + ++P  +
Sbjct: 471 LSGNRLTTLPP-VVFDLTWLKELYVAANGLTELPTEVGRLTTLEILDLTSNHLTALPEEL 529

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
             C  L E    +N L+++PA LG L  L              VE        +DLS N 
Sbjct: 530 GCCVRLTELEASHNRLASVPASLGNLVSL--------------VE--------IDLSANE 567

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN-GPTPALLKYLRSRLPENEDSEASTTK 345
           L+ LPPE+ ++T LR L L    L+ L   L    P P L      R   N +   + T 
Sbjct: 568 LTTLPPELARLTALRHLKLCHCRLQRLPRELAALVPPPDL------RFTTNSNDAYACTN 621

Query: 346 EDLITMATRLSVTSKE 361
            D      RLS  S E
Sbjct: 622 GDRTAYPGRLSWLSTE 637



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 168/377 (44%), Gaps = 60/377 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L LAHN +  L   L  LP LT L +  N L+ LP  +  L  L  L++  N++ ++
Sbjct: 305 LQTLDLAHNLLPFLPPALGTLPRLTNLFLGANLLTLLPTELCGLSQLAELELQDNALEEL 364

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E+G    L   D  +NQL  LP S+G+ + L    A  N I+ LP +L   S +++L 
Sbjct: 365 PAELGQMEKLAHLDVRNNQLTALPPSIGQLVKLRLLDAGMNLISDLPPELYAVSSLARLS 424

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+++ L  +     T L  L+   N L+ +P  +  L+ L  L L  NR+ ++P  +
Sbjct: 425 LSGNRISDLPEDFCRL-TRLERLLLGYNQLSTLPAGLNQLTHLTVLSLSGNRLTTLPPVV 483

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
                L E Y+  N L+ LP E+G+L+ L                       +LDL++N 
Sbjct: 484 FDLTWLKELYVAANGLTELPTEVGRLTTL----------------------EILDLTSNH 521

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           L+ LP E+G    L +L  + N L ++ +SL N                           
Sbjct: 522 LTALPEELGCCVRLTELEASHNRLASVPASLGN--------------------------- 554

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS-CASL 405
            L+++         E+ L    L+ +P E+     +  L L    +Q LP EL++     
Sbjct: 555 -LVSLV--------EIDLSANELTTLPPELARLTALRHLKLCHCRLQRLPRELAALVPPP 605

Query: 406 QVKFSDLVTNKESCISG 422
            ++F+    +  +C +G
Sbjct: 606 DLRFTTNSNDAYACTNG 622



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 173/362 (47%), Gaps = 17/362 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMK 105
           LQ+L+L  NN+  L  ++ +L  LT L V +N L  LP  + E + +L+ L    N + +
Sbjct: 73  LQRLMLVKNNLTMLPVEICHLRNLTKLEVGNNALVALPEGMFEAMPLLEELSCFMNQLQR 132

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+G A +L +     NQL+ LP  LG C +L +   + N +T+LP  LA  S + +L
Sbjct: 133 LPREVGWARSLKRLVAYVNQLQRLPEELGLCADLVELDVATNHLTALPAMLAHLSSLRRL 192

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +V  N+L  L   L      L  L    N L  +P+ +G L++L  L L  N + S+P++
Sbjct: 193 NVSSNRLVHLGPQL-GDLPDLERLDLRFNRLLRLPDELGRLAQLNSLLLDHNDLASLPAA 251

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLS 283
           +S   +L    +  N L+ LP +   L  L  L L +N+L     E  A    L  LDL+
Sbjct: 252 LSTLSTLKLLSINENRLAHLPPDALALPALAELSLRANRLTALPPEPLAALTALQTLDLA 311

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           +N L  LPP +G +  L  L L  N L  L + L       L +     L +N   E   
Sbjct: 312 HNLLPFLPPALGTLPRLTNLFLGANLLTLLPTELC-----GLSQLAELELQDNALEELPA 366

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
               +  +A         L +    L+A+P  I +  ++  LD   N I +LPPEL + +
Sbjct: 367 ELGQMEKLA--------HLDVRNNQLTALPPSIGQLVKLRLLDAGMNLISDLPPELYAVS 418

Query: 404 SL 405
           SL
Sbjct: 419 SL 420



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 152/331 (45%), Gaps = 39/331 (11%)

Query: 78  NKLSELPA-AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC 136
           N+L+ LP   +  L  L++LD++ N +  +P  +G+   L      +N L  LP+ L   
Sbjct: 289 NRLTALPPEPLAALTALQTLDLAHNLLPFLPPALGTLPRLTNLFLGANLLTLLPTELCGL 348

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
             L++ +  +N +  LP +L    K++ LDV  N+LT L  + I     L  L A  NL+
Sbjct: 349 SQLAELELQDNALEELPAELGQMEKLAHLDVRNNQLTALPPS-IGQLVKLRLLDAGMNLI 407

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
           + +P  + ++S L RL L  NRI  +P        L    +G N LS LPA L +L+ L 
Sbjct: 408 SDLPPELYAVSSLARLSLSGNRISDLPEDFCRLTRLERLLLGYNQLSTLPAGLNQLTHLT 467

Query: 257 TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            L L  N+L         L  L  L ++ N L+ LP E+G++TTL  L LT N L     
Sbjct: 468 VLSLSGNRLTTLPPVVFDLTWLKELYVAANGLTELPTEVGRLTTLEILDLTSNHL----- 522

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
                          + LPE             +    RL+    EL      L+++P+ 
Sbjct: 523 ---------------TALPEE------------LGCCVRLT----ELEASHNRLASVPAS 551

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +     + ++DLS N +  LPPEL+   +L+
Sbjct: 552 LGNLVSLVEIDLSANELTTLPPELARLTALR 582



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 1/203 (0%)

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L   + + N+   LP ++ +   L       N +T LP ++     ++KL+V  N L  
Sbjct: 49  SLTFLNANYNRFDRLPPNIAKLAKLQRLMLVKNNLTMLPVEICHLRNLTKLEVGNNALVA 108

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L   +  +  +L EL    N L  +P  +G    L RL  + N++  +P  +  C  L E
Sbjct: 109 LPEGMFEAMPLLEELSCFMNQLQRLPREVGWARSLKRLVAYVNQLQRLPEELGLCADLVE 168

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
             +  N L+ALPA L  LS L  L++ SN+L     +   L  L  LDL  N L  LP E
Sbjct: 169 LDVATNHLTALPAMLAHLSSLRRLNVSSNRLVHLGPQLGDLPDLERLDLRFNRLLRLPDE 228

Query: 294 IGKMTTLRKLLLTGNPLRTLRSS 316
           +G++  L  LLL  N L +L ++
Sbjct: 229 LGRLAQLNSLLLDHNDLASLPAA 251



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 116/260 (44%), Gaps = 7/260 (2%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L    N I  L  +L  +  L  L++S N++S+LP     L  L+ L + +N + 
Sbjct: 395 VKLRLLDAGMNLISDLPPELYAVSSLARLSLSGNRISDLPEDFCRLTRLERLLLGYNQLS 454

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  +   T L     S N+L  LP  +     L +   + N +T LP ++   + +  
Sbjct: 455 TLPAGLNQLTHLTVLSLSGNRLTTLPPVVFDLTWLKELYVAANGLTELPTEVGRLTTLEI 514

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N LT L   L      LTEL AS N L  +P ++G+L  L+ +DL  N + ++P 
Sbjct: 515 LDLTSNHLTALPEEL-GCCVRLTELEASHNRLASVPASLGNLVSLVEIDLSANELTTLPP 573

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV-----EACQLRLSV 279
            ++   +L    + +  L  LP EL  L     L   +N    Y        A   RLS 
Sbjct: 574 ELARLTALRHLKLCHCRLQRLPRELAALVPPPDLRFTTNSNDAYACTNGDRTAYPGRLSW 633

Query: 280 LDLSNN-SLSGLPPEIGKMT 298
           L    N  L+ LP  +  +T
Sbjct: 634 LSTEGNPELADLPEALASIT 653


>gi|402881488|ref|XP_003904303.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Papio anubis]
          Length = 582

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 204/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  L+ CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G    LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNFRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 179/382 (46%), Gaps = 70/382 (18%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCV------------- 270
           S+S C +L E  + NN +S LP   L  L KL +L L  N  + Y V             
Sbjct: 302 SLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 271 -EACQLR------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR--- 314
            E  ++             LS L++ +N L+ LP + G  T++ +L L  N L  +    
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           S LV+     L   L  +LP              +    +L    +EL LE   L ++P+
Sbjct: 422 SGLVSLEVLILSNNLLKKLPHG------------LGNFRKL----RELDLEENKLESLPN 465

Query: 375 EIWEAGEITKLDLSRNSIQELP 396
           EI    ++ KL L+ N +  LP
Sbjct: 466 EIAYLKDLQKLVLTNNQLTTLP 487



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNFRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 2/202 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSL 317
            +++L +L L  N L  +  SL
Sbjct: 282 NLSSLSRLGLRYNRLSAIPRSL 303



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G    L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNFRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 199

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   ++LS+    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSKLSM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ +C   Q+   DL  N+
Sbjct: 247 HNQLEHLPKEIGNCT--QITNLDLQHNE 272


>gi|442618950|ref|NP_001262544.1| flyers-cup, isoform F [Drosophila melanogaster]
 gi|440217396|gb|AGB95926.1| flyers-cup, isoform F [Drosophila melanogaster]
          Length = 802

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 165/366 (45%), Gaps = 65/366 (17%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQKLI 51
           K AR SG+LNLSN++L  VP  +Y + +EA               E D WW  V L  L 
Sbjct: 104 KLARKSGTLNLSNKALARVPKRLY-DINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLD 162

Query: 52  LAHNNIEKLKEDLRNLPLLTVL-----------------------NVSHNKLSELPAAIG 88
           L+ N +  +   + NL  LTVL                       NVSHNKLS+LP A+ 
Sbjct: 163 LSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQLPRAMY 222

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+ L++S+N  +++  +I     L   D   N ++ LP  +G  + L+      N 
Sbjct: 223 SLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNH 282

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I  LP DL +   + K+D+  N LT L                        PE +G L +
Sbjct: 283 IKELPPDLVNMRSLQKIDLMHNDLTSL------------------------PEDMGLLRK 318

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKE 267
           L  L L  N IL +P    G  +L E +  NN +  +P  +   L  L  LDL  N++ E
Sbjct: 319 LDCLYLQHNDILELPE-FEGNEALNELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITE 377

Query: 268 YCVEACQLRLSVL-DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E C LR     D+SNN++S LP  +  +  L  L + GNP++T+R  ++   T  +L
Sbjct: 378 LPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRIL 437

Query: 327 KYLRSR 332
           K L  R
Sbjct: 438 KTLHDR 443



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 5/191 (2%)

Query: 149 ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +TS+P+ +   ++   +  +D   N+L+ L N L     ++TEL+ S N++  +P+ I  
Sbjct: 611 LTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQ 670

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            +R+  L+L  N +  +P+      +L E  + NN    +P  + +L  L  L    N +
Sbjct: 671 FTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHI 730

Query: 266 KEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           K   V   Q   RLS LDL NN +  +PP +G +T +  L L GNP R  R  ++   T 
Sbjct: 731 KMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTD 790

Query: 324 ALLKYLRSRLP 334
           A++ YLR R+P
Sbjct: 791 AIMSYLRDRIP 801


>gi|381145579|gb|AFF59222.1| leucine-rich repeat proteins [Scylla paramamosain]
          Length = 630

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 198/401 (49%), Gaps = 36/401 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ VYK                L  L L  N I  + E++RNL  L  L
Sbjct: 223 LDLRHNKLTEIPDVVYK-------------LPSLITLFLRFNRIRVVGEEIRNLKNLITL 269

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N++ +LP  IGEL  L +LDV+ N +  + +EIG+  +L       N+L ELP S+
Sbjct: 270 SLRENRIRQLPNGIGELTRLGTLDVAHNHLEVLTEEIGNCISLQTLHLQHNELVELPQSI 329

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL+      N + S+P  L+ C  + + +VEGN+++ L + L++S + L+ L  S+
Sbjct: 330 GNLRNLTCLGLRYNRLKSVPRSLSRCINLDEFNVEGNQISQLPDGLLSSLSNLSSLTLSR 389

Query: 194 NLLNGMPETIGSLSRLIR---LDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N  N  P  IG  S+      ++L  N++  IP  I S    L +  M  N L++LP ++
Sbjct: 390 NSFNSYP--IGGPSQFTNVHSINLEHNQVDRIPYGIFSRAKHLTKLNMNYNFLTSLPLDI 447

Query: 250 GKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G    +  L+L +NQL +   + +C   L VL L+NN L  +P  IG +  LR L L  N
Sbjct: 448 GSWMNMVELNLGTNQLNKVPDDISCLQNLEVLILTNNCLRKIPSSIGNLRKLRVLDLEEN 507

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPE-NEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
            L  L       P    LK L+  + + N+ S       +LI + T LSV          
Sbjct: 508 RLEGL------PPEIGFLKDLQKLVVQSNQLSALPRALGNLINL-TYLSVGEN------- 553

Query: 368 NLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQV 407
           NLS +P EI     +  L L+ N  +  LP EL+ C +LQ+
Sbjct: 554 NLSYLPEEIGTLESLETLYLNENPMLHNLPFELALCTNLQI 594



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 153/332 (46%), Gaps = 23/332 (6%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           + LD+S +SI ++P  + + T LV+F   SN+L  LP  +GR +NL     S N +TSLP
Sbjct: 152 QRLDLSNSSISQLPSSMNNVTHLVEFYLYSNKLVTLPPEIGRLVNLQTLGLSENSLTSLP 211

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           + L +  ++  LD+  NKLT +  +++     L  L    N +  + E I +L  LI L 
Sbjct: 212 DTLVNLVQLKVLDLRHNKLTEIP-DVVYKLPSLITLFLRFNRIRVVGEEIRNLKNLITLS 270

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L +NRI  +P+ I     L    + +N L  L  E+G    L TL L  N+L E      
Sbjct: 271 LRENRIRQLPNGIGELTRLGTLDVAHNHLEVLTEEIGNCISLQTLHLQHNELVELPQSIG 330

Query: 274 QLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL-----------------RS 315
            LR L+ L L  N L  +P  + +   L +  + GN +  L                 R+
Sbjct: 331 NLRNLTCLGLRYNRLKSVPRSLSRCINLDEFNVEGNQISQLPDGLLSSLSNLSSLTLSRN 390

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
           S  + P     ++        E ++       + + A  L+    +L++    L+++P +
Sbjct: 391 SFNSYPIGGPSQFTNVHSINLEHNQVDRIPYGIFSRAKHLT----KLNMNYNFLTSLPLD 446

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I     + +L+L  N + ++P ++S   +L+V
Sbjct: 447 IGSWMNMVELNLGTNQLNKVPDDISCLQNLEV 478



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 25/210 (11%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           +  A  L KL + +N +  L  D+ +   +  LN+  N+L+++P  I  L  L+ L ++ 
Sbjct: 424 FSRAKHLTKLNMNYNFLTSLPLDIGSWMNMVELNLGTNQLNKVPDDISCLQNLEVLILTN 483

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + KIP  IG+   L   D   N+L+ LP  +G   +L      +N +++LP  L +  
Sbjct: 484 NCLRKIPSSIGNLRKLRVLDLEENRLEGLPPEIGFLKDLQKLVVQSNQLSALPRALGNLI 543

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            ++ L V  N L+ L                        PE IG+L  L  L L++N +L
Sbjct: 544 NLTYLSVGENNLSYL------------------------PEEIGTLESLETLYLNENPML 579

Query: 221 -SIPSSISGCCSLAEFYMGNNALSALPAEL 249
            ++P  ++ C +L    + N  LS +P E+
Sbjct: 580 HNLPFELALCTNLQIMSIENCPLSQIPPEI 609


>gi|417760264|ref|ZP_12408290.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774468|ref|ZP_12422333.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675383|ref|ZP_13236674.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943831|gb|EKN89422.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575801|gb|EKQ38818.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577545|gb|EKQ45415.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 384

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 173/378 (45%), Gaps = 47/378 (12%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S +KL  LP  IG+L  L+ L+   N +  +P EIG    L + 
Sbjct: 43  LTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 102

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
              +NQL  LP  +G+  NL     +NN +T+LPE++     + +L++  N+L +L    
Sbjct: 103 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKE- 161

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL-HQNRILSI-PSSISGCCSLAEFYM 237
           I     L EL  S N L  +PE IG L  L +L L  +N+  +I P  I+   +L E ++
Sbjct: 162 IGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHL 221

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
             N L+ LP E+G+L  L  LDL+ N+L     E  QL+ L VLDLS N L+ LP EI +
Sbjct: 222 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 281

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +  L++L L  N                                        IT    L 
Sbjct: 282 LQNLQELNLEYNRFEAFPKE--------------------------------ITQFQNL- 308

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF------- 409
              ++L L    L+ +P EI    ++  L L  N +  LP E+    +L+  +       
Sbjct: 309 ---QKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLL 365

Query: 410 SDLVTNKESCISGCYLYW 427
           S+ +      +  C +Y+
Sbjct: 366 SEKIERIRKLLPQCIIYF 383



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 152/303 (50%), Gaps = 17/303 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L+ +P E+              +  +LQ L   +N +  L +++  L  L  L
Sbjct: 56  LDLSRSKLKILPKEI-------------GQLQNLQILNSENNQLTTLPKEIGKLQNLQEL 102

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++ +N+L+ LP  IG+L  LK L ++ N +  +P+EIG    L + +   N+L  LP  +
Sbjct: 103 HLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEI 162

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NK-LTVLSNNLIASWTMLTELIA 191
           GR  NL +   S N +T LPE++     + KL + G NK  T+L    I     L EL  
Sbjct: 163 GRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKE-ITQLQNLQELHL 221

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL+QNR+  +P  I    +L    +  N L+ LP E+ +
Sbjct: 222 KFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQ 281

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L+L  N+ + +  E  Q + L  L LS N L+ LP EIG++  L  L L  N L
Sbjct: 282 LQNLQELNLEYNRFEAFPKEITQFQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQL 341

Query: 311 RTL 313
            TL
Sbjct: 342 ATL 344



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 120/278 (43%), Gaps = 39/278 (14%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+L N  L  +P E+              +  +L+ L L +N +  L E++  L  L  
Sbjct: 101 ELHLQNNQLTTLPEEI-------------GQLQNLKVLHLNNNQLTTLPEEIGKLQNLQE 147

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS--------- 123
           LN+  N+L+ LP  IG L  L+ L +S N +  +P+EIG   +L K              
Sbjct: 148 LNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILP 207

Query: 124 ----------------NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
                           N+L  LP  +G+  NL       N +T LP+++     +  LD+
Sbjct: 208 KEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDL 267

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
            GN+LT+L    I     L EL    N     P+ I     L +L L +N++ ++P  I 
Sbjct: 268 SGNQLTILPKE-ITQLQNLQELNLEYNRFEAFPKEITQFQNLQKLHLSRNQLTTLPKEIG 326

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
               L    + +N L+ LP E+ +L  L  L LH+N L
Sbjct: 327 RLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPL 364



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 24/176 (13%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L +L++  N+L+ LP  IG+L  L  LD+S N +  
Sbjct: 215 NLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTI 274

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EI     L + +   N+ +  P  + +  NL     S N +T+LP+++    K+  L
Sbjct: 275 LPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQKLHLSRNQLTTLPKEIGRLQKLESL 334

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
            ++ N+L  L                        PE I  L  L +L LH N +LS
Sbjct: 335 GLDHNQLATL------------------------PEEIKQLKNLKKLYLHNNPLLS 366


>gi|427720310|ref|YP_007068304.1| adenylate cyclase [Calothrix sp. PCC 7507]
 gi|427352746|gb|AFY35470.1| Adenylate cyclase [Calothrix sp. PCC 7507]
          Length = 317

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 158/318 (49%), Gaps = 26/318 (8%)

Query: 3   RILKAARTSG--SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           ++++ A T G   L+LS  +L  +P E+ K                L+KLIL      K 
Sbjct: 8   KVIEQAATEGVTELDLSGNNLTALPPEIGK-------------LTQLKKLILG-----KY 49

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           + D        ++++  N LS LP  +G L+ L+ L V  N +  +P  IG  T L  F 
Sbjct: 50  QYDQEG----YIVDIIGNNLSALPKELGLLNQLEELLVLANHLTTLPSAIGQLTNLQTFV 105

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
              NQL  LP  +G+  +L      +N ++SLP ++   S +  L +  N+L+ L    I
Sbjct: 106 LKYNQLSSLPREIGQLSHLQLLDIRSNQLSSLPREIGQLSHLQLLYLRSNQLSSLPRE-I 164

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
              T L  L    N L+ +P  IG L  L  L L++NR++ +PS I     L    +G+N
Sbjct: 165 EQLTNLRSLDLGDNQLSSLPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHLESLNLGDN 224

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTT 299
            LS LP E+G+LS L +L L  NQL     E  QL  L  LDLS N LS LP +IG++T 
Sbjct: 225 QLSNLPREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSLPKKIGQLTN 284

Query: 300 LRKLLLTGNPLRTLRSSL 317
           L+ L+L  N L +L S +
Sbjct: 285 LQWLILHNNQLSSLPSEI 302



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 154/334 (46%), Gaps = 52/334 (15%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSL--------------DVSFNSIMKIPDEIGSATA 115
           +T L++S N L+ LP  IG+L  LK L              D+  N++  +P E+G    
Sbjct: 18  VTELDLSGNNLTALPPEIGKLTQLKKLILGKYQYDQEGYIVDIIGNNLSALPKELGLLNQ 77

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L +    +N L  LPS++G+  NL  F    N ++SLP ++   S +  LD+  N+L+ L
Sbjct: 78  LEELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLSSL 137

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
               I   + L  L    N L+ +P  I  L+ L  LDL  N++ S+P  I    +L   
Sbjct: 138 PRE-IGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQLSSLPREIGQLFNLQSL 196

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
           Y+  N L  LP+E+G+LS L +L+L  NQL     E  QL  L  L L  N LS LP E 
Sbjct: 197 YLYKNRLIDLPSEIGQLSHLESLNLGDNQLSNLPREIGQLSNLRSLGLGENQLSSLPNEF 256

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
            ++T L++L L+ N L                    S LP+             I   T 
Sbjct: 257 TQLTNLQRLDLSFNQL--------------------SSLPKK------------IGQLTN 284

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           L    + L L    LS++PSEI +   +  LDL+
Sbjct: 285 L----QWLILHNNQLSSLPSEIGQLTNLRSLDLA 314



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 113/218 (51%), Gaps = 1/218 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +  +LQ  +L +N +  L  ++  L  L +L++  N+LS LP  IG+L  L+ L +  N 
Sbjct: 97  QLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLSSLPREIGQLSHLQLLYLRSNQ 156

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EI   T L   D   NQL  LP  +G+  NL       N +  LP ++   S +
Sbjct: 157 LSSLPREIEQLTNLRSLDLGDNQLSSLPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHL 216

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             L++  N+L+ L    I   + L  L   +N L+ +P     L+ L RLDL  N++ S+
Sbjct: 217 ESLNLGDNQLSNLPRE-IGQLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSL 275

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           P  I    +L    + NN LS+LP+E+G+L+ L +LDL
Sbjct: 276 PKKIGQLTNLQWLILHNNQLSSLPSEIGQLTNLRSLDL 313



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 142/313 (45%), Gaps = 49/313 (15%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S N++  +P EIG  T L K      Q  +     G  +++       N +++LP++
Sbjct: 21  LDLSGNNLTALPPEIGKLTQLKKLILGKYQYDQE----GYIVDII-----GNNLSALPKE 71

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L   +++ +L V  N LT L +  I   T L   +   N L+ +P  IG LS L  LD+ 
Sbjct: 72  LGLLNQLEELLVLANHLTTLPSA-IGQLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIR 130

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N++ S+P  I     L   Y+ +N LS+LP E+ +L+ L +LDL  NQL     E  QL
Sbjct: 131 SNQLSSLPREIGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQLSSLPREIGQL 190

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 333
             L  L L  N L  LP EIG+++ L  L L  N L  L   +        L  LRS  L
Sbjct: 191 FNLQSLYLYKNRLIDLPSEIGQLSHLESLNLGDNQLSNLPREI------GQLSNLRSLGL 244

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
            EN+                               LS++P+E  +   + +LDLS N + 
Sbjct: 245 GENQ-------------------------------LSSLPNEFTQLTNLQRLDLSFNQLS 273

Query: 394 ELPPELSSCASLQ 406
            LP ++    +LQ
Sbjct: 274 SLPKKIGQLTNLQ 286



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 13/155 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+L +  L  +P E+ + F+             LQ L L  N +  L  ++  L  L  
Sbjct: 172 SLDLGDNQLSSLPREIGQLFN-------------LQSLYLYKNRLIDLPSEIGQLSHLES 218

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+LS LP  IG+L  L+SL +  N +  +P+E    T L + D S NQL  LP  
Sbjct: 219 LNLGDNQLSNLPREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSLPKK 278

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
           +G+  NL      NN ++SLP ++   + +  LD+
Sbjct: 279 IGQLTNLQWLILHNNQLSSLPSEIGQLTNLRSLDL 313



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 13/137 (9%)

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE---- 335
           LDLS N+L+ LPPEIGK+T L+KL+L G         +V+     L     S LP+    
Sbjct: 21  LDLSGNNLTALPPEIGKLTQLKKLIL-GKYQYDQEGYIVDIIGNNL-----SALPKELGL 74

Query: 336 -NEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
            N+  E       L T+ + +   +  +   L+   LS++P EI +   +  LD+  N +
Sbjct: 75  LNQLEELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQL 134

Query: 393 QELPPELSSCASLQVKF 409
             LP E+   + LQ+ +
Sbjct: 135 SSLPREIGQLSHLQLLY 151



 Score = 42.0 bits (97), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 10/97 (10%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEGD--------KWWEAVDLQKLILAHNNIEKLKE 62
           SLNL +  L ++P E+ +  N    G G+        ++ +  +LQ+L L+ N +  L +
Sbjct: 218 SLNLGDNQLSNLPREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSLPK 277

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
            +  L  L  L + +N+LS LP+ IG+L  L+SLD++
Sbjct: 278 KIGQLTNLQWLILHNNQLSSLPSEIGQLTNLRSLDLA 314


>gi|427706829|ref|YP_007049206.1| small GTP-binding protein [Nostoc sp. PCC 7107]
 gi|427359334|gb|AFY42056.1| small GTP-binding protein [Nostoc sp. PCC 7107]
          Length = 925

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/278 (33%), Positives = 153/278 (55%), Gaps = 10/278 (3%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K W  +DL     + N + K+ E +  L  LT L + +NK++E+P  I  L  L  L++S
Sbjct: 16  KGWRELDL-----SGNKLTKIPEAIAKLTNLTGLYLHNNKITEIPQVIANLTNLIQLNLS 70

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           +N I +IP+ I   T L     S+NQ+ E+P  + +  NL     +NN I+ +PE++A  
Sbjct: 71  YNQISEIPEAITQLTNLRLLSLSNNQVSEIPEEIAQLTNLRLLSLNNNQISEIPEEIAQL 130

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           + +++LD+  N++T +    IA  T L EL  S N ++ +PE I  L+ L  L L  N+I
Sbjct: 131 TNLTQLDLYNNQITEIPE-AIAQLTNLRELYLSNNQISEIPEEIAQLTNLRLLYLSDNQI 189

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
             IP +I+   +L + Y+ +N ++ +P  + +L+ L  LDL  NQ+ E      +L  L 
Sbjct: 190 TEIPEAITQLTNLTDLYLSDNQITEIPEAITQLTNLRQLDLGGNQITEIPEALVKLTNLR 249

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
            LDLSNN ++ +P EI      +K+L   N LR +R+S
Sbjct: 250 QLDLSNNQITEIPLEILDSKETKKIL---NYLRQIRTS 284



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 133/247 (53%), Gaps = 25/247 (10%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S NKL+++P AI +L  L  L +  N I +IP  I + T L++ + S NQ+ E+P +
Sbjct: 21  LDLSGNKLTKIPEAIAKLTNLTGLYLHNNKITEIPQVIANLTNLIQLNLSYNQISEIPEA 80

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +  NL     SNN ++ +PE++A  + +  L +  N+++                   
Sbjct: 81  ITQLTNLRLLSLSNNQVSEIPEEIAQLTNLRLLSLNNNQIS------------------- 121

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                 +PE I  L+ L +LDL+ N+I  IP +I+   +L E Y+ NN +S +P E+ +L
Sbjct: 122 -----EIPEEIAQLTNLTQLDLYNNQITEIPEAIAQLTNLRELYLSNNQISEIPEEIAQL 176

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           + L  L L  NQ+ E      QL  L+ L LS+N ++ +P  I ++T LR+L L GN + 
Sbjct: 177 TNLRLLYLSDNQITEIPEAITQLTNLTDLYLSDNQITEIPEAITQLTNLRQLDLGGNQIT 236

Query: 312 TLRSSLV 318
            +  +LV
Sbjct: 237 EIPEALV 243



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 139/265 (52%), Gaps = 14/265 (5%)

Query: 7   AARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRN 66
           AA+    L+LS   L  +P  + K               +L  L L +N I ++ + + N
Sbjct: 14  AAKGWRELDLSGNKLTKIPEAIAK-------------LTNLTGLYLHNNKITEIPQVIAN 60

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L  L  LN+S+N++SE+P AI +L  L+ L +S N + +IP+EI   T L     ++NQ+
Sbjct: 61  LTNLIQLNLSYNQISEIPEAITQLTNLRLLSLSNNQVSEIPEEIAQLTNLRLLSLNNNQI 120

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
            E+P  + +  NL+     NN IT +PE +A  + + +L +  N+++ +    IA  T L
Sbjct: 121 SEIPEEIAQLTNLTQLDLYNNQITEIPEAIAQLTNLRELYLSNNQISEIPEE-IAQLTNL 179

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L  S N +  +PE I  L+ L  L L  N+I  IP +I+   +L +  +G N ++ +P
Sbjct: 180 RLLYLSDNQITEIPEAITQLTNLTDLYLSDNQITEIPEAITQLTNLRQLDLGGNQITEIP 239

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVE 271
             L KL+ L  LDL +NQ+ E  +E
Sbjct: 240 EALVKLTNLRQLDLSNNQITEIPLE 264



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 140/292 (47%), Gaps = 38/292 (13%)

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           E  +A    + D S N+L ++P ++ +  NL+     NN IT +P+              
Sbjct: 11  EQAAAKGWRELDLSGNKLTKIPEAIAKLTNLTGLYLHNNKITEIPQ-------------- 56

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
                     +IA+ T L +L  S N ++ +PE I  L+ L  L L  N++  IP  I+ 
Sbjct: 57  ----------VIANLTNLIQLNLSYNQISEIPEAITQLTNLRLLSLSNNQVSEIPEEIAQ 106

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             +L    + NN +S +P E+ +L+ L  LDL++NQ+ E      QL  L  L LSNN +
Sbjct: 107 LTNLRLLSLNNNQISEIPEEIAQLTNLTQLDLYNNQITEIPEAIAQLTNLRELYLSNNQI 166

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           S +P EI ++T LR L L+ N +  +  ++       L       L +N+ +E      +
Sbjct: 167 SEIPEEIAQLTNLRLLYLSDNQITEIPEAITQ-----LTNLTDLYLSDNQITEIP----E 217

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            IT  T L    ++L L G  ++ IP  + +   + +LDLS N I E+P E+
Sbjct: 218 AITQLTNL----RQLDLGGNQITEIPEALVKLTNLRQLDLSNNQITEIPLEI 265



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 108/243 (44%), Gaps = 37/243 (15%)

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           EL  S N L  +PE I  L+ L  L LH N+I  IP  I+   +L +  +  N +S +P 
Sbjct: 20  ELDLSGNKLTKIPEAIAKLTNLTGLYLHNNKITEIPQVIANLTNLIQLNLSYNQISEIPE 79

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL------------------------RLSVLDLS 283
            + +L+ L  L L +NQ+ E   E  QL                         L+ LDL 
Sbjct: 80  AITQLTNLRLLSLSNNQVSEIPEEIAQLTNLRLLSLNNNQISEIPEEIAQLTNLTQLDLY 139

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN ++ +P  I ++T LR+L L+ N +  +   +       LL      L +N+ +E   
Sbjct: 140 NNQITEIPEAIAQLTNLRELYLSNNQISEIPEEIAQLTNLRLL-----YLSDNQITEIP- 193

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
              + IT  T L+    +L L    ++ IP  I +   + +LDL  N I E+P  L    
Sbjct: 194 ---EAITQLTNLT----DLYLSDNQITEIPEAITQLTNLRQLDLGGNQITEIPEALVKLT 246

Query: 404 SLQ 406
           +L+
Sbjct: 247 NLR 249



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 37/199 (18%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDL  N++  IP +I+   +L   Y+ NN ++ +P  +  L+ L  L+L  NQ+ E    
Sbjct: 21  LDLSGNKLTKIPEAIAKLTNLTGLYLHNNKITEIPQVIANLTNLIQLNLSYNQISEIPEA 80

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             QL  L +L LSNN +S +P EI ++T LR L L  N +                    
Sbjct: 81  ITQLTNLRLLSLSNNQVSEIPEEIAQLTNLRLLSLNNNQI-------------------- 120

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           S +PE             I   T L+    +L L    ++ IP  I +   + +L LS N
Sbjct: 121 SEIPEE------------IAQLTNLT----QLDLYNNQITEIPEAIAQLTNLRELYLSNN 164

Query: 391 SIQELPPELSSCASLQVKF 409
            I E+P E++   +L++ +
Sbjct: 165 QISEIPEEIAQLTNLRLLY 183


>gi|418755279|ref|ZP_13311486.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964290|gb|EKO32180.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 267

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 132/270 (48%), Gaps = 31/270 (11%)

Query: 68  PLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK 127
           P L  L++++N+L+ LP  IG+L  L+ L +  N +  +P+EIG+   L   +  +N+L 
Sbjct: 3   PALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLI 62

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
            LP  +G    L     +NN + +LP+++    ++  L +E N+L +L            
Sbjct: 63  TLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRIL------------ 110

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
                       P+ IG L  L  L L  NR+ S P  I     L   Y+ NN L+ LP 
Sbjct: 111 ------------PQEIGKLQNLKELILENNRLESFPKEIGTLQKLQHLYLANNQLATLPK 158

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L  LDL  NQL     E   L RL  L L NN L+ LP EIGK+  L  L L+
Sbjct: 159 EIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLATLPKEIGKLEKLEDLNLS 218

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           GNP  T    +V       LK+L++ + +N
Sbjct: 219 GNPFTTFPQEIVG------LKHLKTLVLQN 242



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 127/258 (49%), Gaps = 5/258 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L LA+N +  L  ++  L  L  L + +N+L+ LP  IG L  L+SL++  N ++ +
Sbjct: 5   LKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLITL 64

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG+   L     ++NQL  LP  +G+   L      NN +  LP+++     + +L 
Sbjct: 65  PKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKELI 124

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +E N+L       I +   L  L  + N L  +P+ IG L  L  LDL  N+++++P  I
Sbjct: 125 LENNRLESFPKE-IGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEI 183

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
                L    + NN L+ LP E+GKL KL  L+L  N    +  E   L+     L    
Sbjct: 184 GTLQRLEWLSLKNNQLATLPKEIGKLEKLEDLNLSGNPFTTFPQEIVGLK----HLKTLV 239

Query: 287 LSGLPPEIGKMTTLRKLL 304
           L  +P  + +   +RKLL
Sbjct: 240 LQNIPALLSEKEKIRKLL 257



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 124/264 (46%), Gaps = 38/264 (14%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           +NN +T+LP ++    K+  L +E N+LT L                        PE IG
Sbjct: 11  ANNQLTTLPNEIGKLRKLEYLRLENNRLTTL------------------------PEEIG 46

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           +L  L  L+L  NR++++P  I     L   Y+ NN L+ LP E+GKL +L  L L +NQ
Sbjct: 47  TLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQ 106

Query: 265 LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           L+    E  +L+ L  L L NN L   P EIG +  L+ L L  N L TL   +      
Sbjct: 107 LRILPQEIGKLQNLKELILENNRLESFPKEIGTLQKLQHLYLANNQLATLPKEI------ 160

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
             L+ L+    +  D++  T  E++ T+  RL      LSL+   L+ +P EI +  ++ 
Sbjct: 161 GQLQNLKDL--DLSDNQLVTLPEEIGTLQ-RLEW----LSLKNNQLATLPKEIGKLEKLE 213

Query: 384 KLDLSRNSIQELPPELSSCASLQV 407
            L+LS N     P E+     L+ 
Sbjct: 214 DLNLSGNPFTTFPQEIVGLKHLKT 237



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 108/243 (44%), Gaps = 39/243 (16%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL N  L  +P E+       G   K      L+ L L +N +  L +++  L  L  
Sbjct: 53  SLNLENNRLITLPKEI-------GTLQK------LEWLYLTNNQLATLPKEIGKLQRLEW 99

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+L  LP  IG+L  LK L +  N +   P EIG+   L     ++NQL  LP  
Sbjct: 100 LGLENNQLRILPQEIGKLQNLKELILENNRLESFPKEIGTLQKLQHLYLANNQLATLPKE 159

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL D   S+N + +LPE++    ++  L ++ N+L  L                 
Sbjct: 160 IGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLATL----------------- 202

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+ IG L +L  L+L  N   + P  I G   L    + N  + AL +E  K+
Sbjct: 203 -------PKEIGKLEKLEDLNLSGNPFTTFPQEIVGLKHLKTLVLQN--IPALLSEKEKI 253

Query: 253 SKL 255
            KL
Sbjct: 254 RKL 256



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 95/220 (43%), Gaps = 40/220 (18%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L L  N++ ++P+ I     L    + NN L+ LP E+G L  L +L+L +N+L     E
Sbjct: 8   LHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLITLPKE 67

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
              L +L  L L+NN L+ LP EIGK+  L  L L  N LR L         P  +  L+
Sbjct: 68  IGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRIL---------PQEIGKLQ 118

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +                            KEL LE   L + P EI    ++  L L+ N
Sbjct: 119 N---------------------------LKELILENNRLESFPKEIGTLQKLQHLYLANN 151

Query: 391 SIQELPPELSSCASLQ-VKFSD--LVTNKESCISGCYLYW 427
            +  LP E+    +L+ +  SD  LVT  E   +   L W
Sbjct: 152 QLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEW 191


>gi|291239871|ref|XP_002739845.1| PREDICTED: Lap1-like [Saccoglossus kowalevskii]
          Length = 1530

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 191/406 (47%), Gaps = 26/406 (6%)

Query: 13  SLNLSNRSLRDVPNEVY-----------KNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           SL +S  SL+++P+ VY           KN       D   +   L+KL+L+ N IE++ 
Sbjct: 381 SLVISGHSLQEIPSSVYQLKMLTELDVGKNMIRCISSDMSNKLDQLEKLVLSDNQIEEIP 440

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
             L  L  L  L++  NK+S L A I +L  L+ L++S N + ++P  +     L K D 
Sbjct: 441 TSLYQLKSLKELDMRKNKISSLSADISKLENLEILNISGNILDEVPASVYQLRKLKKLDM 500

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
            SN L E+ S + +   L     SNN +  LP  +     + KL++EGNKL  +S   I 
Sbjct: 501 RSNMLTEISSEISKLEWLEILVVSNNKLQDLPISVYKLGNLKKLEIEGNKLKYVSPE-IF 559

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L  LI S N L G+P  + +L +L  LD   N+I  + + I     L    +  N 
Sbjct: 560 QLQKLETLIVSGNNLQGIPNALYNLRKLKELDARNNKITYLSAEICQLKQLQRLVVSGNI 619

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 300
           L  +P  + KL KL  +++ SN L     E  QL +L VL +S N L  +PP + K+  L
Sbjct: 620 LHEIPTSICKLKKLKEINVRSNALTSLPQEISQLTQLEVLIVSCNKLPNVPPVVYKLKGL 679

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           +KL +  N + ++   +       +L    ++L            +D+     RL    K
Sbjct: 680 KKLDIGNNIISSILPDIHELNQLQVLNVSYNQL------------QDVTPNIYRLR-QLK 726

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            L L+   +++   ++ +  E+  LD+S N +QELPP L    S++
Sbjct: 727 RLDLQHNKITSPLPDVSKLQELEVLDISDNKLQELPPSLYQLKSMK 772



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 193/397 (48%), Gaps = 38/397 (9%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K     +L+ L L  NN+  L + +  L  L +L++S NK   +P+ + +L  LK LDV 
Sbjct: 28  KLCRFTNLKALYLGKNNLSALPDKISTLQHLKILDISQNKFDNIPSCVLKLKSLKILDVE 87

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL------- 152
            NS+  +P EI     L K + S NQ+K +P ++ +  +L++    NN IT+L       
Sbjct: 88  GNSVTSLPPEISQLNQLEKLNASCNQIKTVPDAVYKLKSLTELNVGNNLITTLSYSISQL 147

Query: 153 ----------------PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
                           P +L   +K+  LD+ GN ++ ++   I+    L  LI S N L
Sbjct: 148 QNLEILVVSDNNLQEVPNNLYHLNKLKLLDIRGNNISSIATE-ISKLKQLNTLIVSCNNL 206

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P  +  L +L + D+  N+I ++ S IS    L    + +N L  +P+++ +L KL 
Sbjct: 207 RKIPNDVYQLRKLKKFDMRGNKITTVTSDISKLDQLEILIVSSNKLHTIPSDIYQLRKLR 266

Query: 257 TLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            LD+ SN ++    +  QL +L +L+LS N L  +P  I K+T L++L +  N + ++ +
Sbjct: 267 ELDVGSNDIR-ILPDISQLKKLEILNLSCNHLEKIPSSIYKLTCLKELNVQSNSITSIST 325

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS-----------KELSL 364
           ++    +  +L    ++L E   +         + M     +TS           K L +
Sbjct: 326 NISELRSLEMLNVSNNKLHEIPPTVCKLKTLKKLDMGNN-RITSLLPEIAQLNQLKSLVI 384

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
            G +L  IPS +++   +T+LD+ +N I+ +  ++S+
Sbjct: 385 SGHSLQEIPSSVYQLKMLTELDVGKNMIRCISSDMSN 421



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 129/466 (27%), Positives = 212/466 (45%), Gaps = 74/466 (15%)

Query: 12  GSLNLSNRSLRDVPNEVY-----KNFDEAGEG-----DKWWEAVDLQKLILAHNNIE--- 58
            +L +S  +LR +PN+VY     K FD  G           +   L+ LI++ N +    
Sbjct: 197 NTLIVSCNNLRKIPNDVYQLRKLKKFDMRGNKITTVTSDISKLDQLEILIVSSNKLHTIP 256

Query: 59  -------KLKE------DLRNLP------LLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
                  KL+E      D+R LP       L +LN+S N L ++P++I +L  LK L+V 
Sbjct: 257 SDIYQLRKLRELDVGSNDIRILPDISQLKKLEILNLSCNHLEKIPSSIYKLTCLKELNVQ 316

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL------- 152
            NSI  I   I    +L   + S+N+L E+P ++ +   L      NN ITSL       
Sbjct: 317 SNSITSISTNISELRSLEMLNVSNNKLHEIPPTVCKLKTLKKLDMGNNRITSLLPEIAQL 376

Query: 153 ----------------PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
                           P  +     +++LDV  N +  +S+++      L +L+ S N +
Sbjct: 377 NQLKSLVISGHSLQEIPSSVYQLKMLTELDVGKNMIRCISSDMSNKLDQLEKLVLSDNQI 436

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P ++  L  L  LD+ +N+I S+ + IS   +L    +  N L  +PA + +L KL 
Sbjct: 437 EEIPTSLYQLKSLKELDMRKNKISSLSADISKLENLEILNISGNILDEVPASVYQLRKLK 496

Query: 257 TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR---- 311
            LD+ SN L E   E  +L  L +L +SNN L  LP  + K+  L+KL + GN L+    
Sbjct: 497 KLDMRSNMLTEISSEISKLEWLEILVVSNNKLQDLPISVYKLGNLKKLEIEGNKLKYVSP 556

Query: 312 ------TLRSSLVNG----PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
                  L + +V+G      P  L  LR +L E    +A   K   ++         + 
Sbjct: 557 EIFQLQKLETLIVSGNNLQGIPNALYNLR-KLKE---LDARNNKITYLSAEICQLKQLQR 612

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           L + G  L  IP+ I +  ++ ++++  N++  LP E+S    L+V
Sbjct: 613 LVVSGNILHEIPTSICKLKKLKEINVRSNALTSLPQEISQLTQLEV 658



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 191/398 (47%), Gaps = 34/398 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN S   ++ VP+ VYK                L +L + +N I  L   +  L  L +L
Sbjct: 107 LNASCNQIKTVPDAVYK-------------LKSLTELNVGNNLITTLSYSISQLQNLEIL 153

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            VS N L E+P  +  L+ LK LD+  N+I  I  EI     L     S N L+++P+ +
Sbjct: 154 VVSDNNLQEVPNNLYHLNKLKLLDIRGNNISSIATEISKLKQLNTLIVSCNNLRKIPNDV 213

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +   L  F    N IT++  D++   ++  L V  NKL  + ++ I     L EL    
Sbjct: 214 YQLRKLKKFDMRGNKITTVTSDISKLDQLEILIVSSNKLHTIPSD-IYQLRKLRELDVGS 272

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +P+ I  L +L  L+L  N +  IPSSI     L E  + +N+++++   + +L 
Sbjct: 273 NDIRILPD-ISQLKKLEILNLSCNHLEKIPSSIYKLTCLKELNVQSNSITSISTNISELR 331

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L++ +N+L E     C+L+ L  LD+ NN ++ L PEI ++  L+ L+++G+ L+ 
Sbjct: 332 SLEMLNVSNNKLHEIPPTVCKLKTLKKLDMGNNRITSLLPEIAQLNQLKSLVISGHSLQE 391

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS---LEGMNL 369
           + SS+        LK L         +E    K  +  +++ +S    +L    L    +
Sbjct: 392 IPSSVYQ------LKML---------TELDVGKNMIRCISSDMSNKLDQLEKLVLSDNQI 436

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             IP+ +++   + +LD+ +N I  L  ++S   +L++
Sbjct: 437 EEIPTSLYQLKSLKELDMRKNKISSLSADISKLENLEI 474



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 190/424 (44%), Gaps = 75/424 (17%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R+   LN+SN  L ++P  V K                L+KL + +N I  L  ++  L 
Sbjct: 331 RSLEMLNVSNNKLHEIPPTVCK-------------LKTLKKLDMGNNRITSLLPEIAQLN 377

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA-TALVKFDCSSNQLK 127
            L  L +S + L E+P+++ +L ML  LDV  N I  I  ++ +    L K   S NQ++
Sbjct: 378 QLKSLVISGHSLQEIPSSVYQLKMLTELDVGKNMIRCISSDMSNKLDQLEKLVLSDNQIE 437

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           E+P+SL +  +L +     N I+SL    AD SK+  L++                    
Sbjct: 438 EIPTSLYQLKSLKELDMRKNKISSLS---ADISKLENLEI-------------------- 474

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
            L  S N+L+ +P ++  L +L +LD+  N +  I S IS    L    + NN L  LP 
Sbjct: 475 -LNISGNILDEVPASVYQLRKLKKLDMRSNMLTEISSEISKLEWLEILVVSNNKLQDLPI 533

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP--------------- 291
            + KL  L  L++  N+LK    E  QL +L  L +S N+L G+P               
Sbjct: 534 SVYKLGNLKKLEIEGNKLKYVSPEIFQLQKLETLIVSGNNLQGIPNALYNLRKLKELDAR 593

Query: 292 --------PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
                    EI ++  L++L+++GN L  + +S+        LK L+     N  S A T
Sbjct: 594 NNKITYLSAEICQLKQLQRLVVSGNILHEIPTSICK------LKKLKEI---NVRSNALT 644

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
           +    I+  T+L V    L +    L  +P  +++   + KLD+  N I  + P++    
Sbjct: 645 SLPQEISQLTQLEV----LIVSCNKLPNVPPVVYKLKGLKKLDIGNNIISSILPDIHELN 700

Query: 404 SLQV 407
            LQV
Sbjct: 701 QLQV 704



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 189/418 (45%), Gaps = 52/418 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L +SN  L+D+P  VYK               +L+KL +  N ++ +  ++  L  L  L
Sbjct: 521 LVVSNNKLQDLPISVYK-------------LGNLKKLEIEGNKLKYVSPEIFQLQKLETL 567

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            VS N L  +P A+  L  LK LD   N I  +  EI     L +   S N L E+P+S+
Sbjct: 568 IVSGNNLQGIPNALYNLRKLKELDARNNKITYLSAEICQLKQLQRLVVSGNILHEIPTSI 627

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT---------------VLSNN 178
            +   L +    +N +TSLP++++  +++  L V  NKL                 + NN
Sbjct: 628 CKLKKLKEINVRSNALTSLPQEISQLTQLEVLIVSCNKLPNVPPVVYKLKGLKKLDIGNN 687

Query: 179 LIAS-------WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +I+S          L  L  S N L  +   I  L +L RLDL  N+I S    +S    
Sbjct: 688 IISSILPDIHELNQLQVLNVSYNQLQDVTPNIYRLRQLKRLDLQHNKITSPLPDVSKLQE 747

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + +N L  LP  L +L  +  L++ SN++     +  QL+ L  ++LS+N ++ +
Sbjct: 748 LEVLDISDNKLQELPPSLYQLKSMKELNVGSNEIISLSSDLSQLKQLRKINLSHNQMNAV 807

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLI 349
           P  I +++ L  L ++ N +  L          + LK+L+   +  N+  E   +   L 
Sbjct: 808 PAAINQLSQLEDLNMSNNNMTKLSGI-------SHLKHLKKLNISFNQVQEVPFSLCKLH 860

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +        K L++   N+S +P  I E   + +L+L  +S+Q +P  L   + L+V
Sbjct: 861 QL--------KVLNVASNNISTLPENISELHNLEELNLKSSSLQNIPSALGHLSKLKV 910



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 198/432 (45%), Gaps = 56/432 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+S   L +VP  VY             +   L+KL +  N + ++  ++  L  L +L
Sbjct: 475 LNISGNILDEVPASVY-------------QLRKLKKLDMRSNMLTEISSEISKLEWLEIL 521

Query: 74  NVSHNKLSELPAAIGELHMLKSLD-----------------------VSFNSIMKIPDEI 110
            VS+NKL +LP ++ +L  LK L+                       VS N++  IP+ +
Sbjct: 522 VVSNNKLQDLPISVYKLGNLKKLEIEGNKLKYVSPEIFQLQKLETLIVSGNNLQGIPNAL 581

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
            +   L + D  +N++  L + + +   L     S N +  +P  +    K+ +++V  N
Sbjct: 582 YNLRKLKELDARNNKITYLSAEICQLKQLQRLVVSGNILHEIPTSICKLKKLKEINVRSN 641

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
            LT L    I+  T L  LI S N L  +P  +  L  L +LD+  N I SI   I    
Sbjct: 642 ALTSLPQE-ISQLTQLEVLIVSCNKLPNVPPVVYKLKGLKKLDIGNNIISSILPDIHELN 700

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
            L    +  N L  +   + +L +L  LDL  N++     +  +L+ L VLD+S+N L  
Sbjct: 701 QLQVLNVSYNQLQDVTPNIYRLRQLKRLDLQHNKITSPLPDVSKLQELEVLDISDNKLQE 760

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDL 348
           LPP + ++ ++++L +  N + +L S L      + LK LR   L  N+ +         
Sbjct: 761 LPPSLYQLKSMKELNVGSNEIISLSSDL------SQLKQLRKINLSHNQMNAVPAA---- 810

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
           I   ++L    ++L++   N++ + S I     + KL++S N +QE+P   S C   Q+K
Sbjct: 811 INQLSQL----EDLNMSNNNMTKL-SGISHLKHLKKLNISFNQVQEVP--FSLCKLHQLK 863

Query: 409 FSDLVTNKESCI 420
             ++ +N  S +
Sbjct: 864 VLNVASNNISTL 875



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 121/240 (50%), Gaps = 21/240 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL + +N I  +  D+  L  L VLNVS+N+L ++   I  L  LK LD+  N I   
Sbjct: 679 LKKLDIGNNIISSILPDIHELNQLQVLNVSYNQLQDVTPNIYRLRQLKRLDLQHNKITSP 738

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
             ++     L   D S N+L+ELP SL +  ++ +    +N I SL  DL+   ++ K++
Sbjct: 739 LPDVSKLQELEVLDISDNKLQELPPSLYQLKSMKELNVGSNEIISLSSDLSQLKQLRKIN 798

Query: 167 VEGNKLTVL----------------SNNL-----IASWTMLTELIASKNLLNGMPETIGS 205
           +  N++  +                +NN+     I+    L +L  S N +  +P ++  
Sbjct: 799 LSHNQMNAVPAAINQLSQLEDLNMSNNNMTKLSGISHLKHLKKLNISFNQVQEVPFSLCK 858

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L +L  L++  N I ++P +IS   +L E  + +++L  +P+ LG LSKL  LD+  N L
Sbjct: 859 LHQLKVLNVASNNISTLPENISELHNLEELNLKSSSLQNIPSALGHLSKLKVLDIRDNHL 918



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 141/302 (46%), Gaps = 24/302 (7%)

Query: 115 ALVKFDCSSNQL----KELP----SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           +L K+D S+ ++    K++     + L R  NL       N +++LP+ ++    +  LD
Sbjct: 3   SLEKYDASAEEIDLRGKQISKISFTKLCRFTNLKALYLGKNNLSALPDKISTLQHLKILD 62

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK   +  + +     L  L    N +  +P  I  L++L +L+   N+I ++P ++
Sbjct: 63  ISQNKFDNIP-SCVLKLKSLKILDVEGNSVTSLPPEISQLNQLEKLNASCNQIKTVPDAV 121

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               SL E  +GNN ++ L   + +L  L  L +  N L+E       L +L +LD+  N
Sbjct: 122 YKLKSLTELNVGNNLITTLSYSISQLQNLEILVVSDNNLQEVPNNLYHLNKLKLLDIRGN 181

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           ++S +  EI K+  L  L+++ N LR +         P  +  LR     +      TT 
Sbjct: 182 NISSIATEISKLKQLNTLIVSCNNLRKI---------PNDVYQLRKLKKFDMRGNKITTV 232

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
              I+   +L +    L +    L  IPS+I++  ++ +LD+  N I+ L P++S    L
Sbjct: 233 TSDISKLDQLEI----LIVSSNKLHTIPSDIYQLRKLRELDVGSNDIRIL-PDISQLKKL 287

Query: 406 QV 407
           ++
Sbjct: 288 EI 289


>gi|271966020|ref|YP_003340216.1| hypothetical protein [Streptosporangium roseum DSM 43021]
 gi|270509195|gb|ACZ87473.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 416

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 203/417 (48%), Gaps = 41/417 (9%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           +DR L+   T+  L+LS+  L ++P  +              +   L +L L+ NN+  +
Sbjct: 14  IDRCLRDGSTT--LDLSSLGLSEIPESLS-------------DLTHLARLDLSENNLSDI 58

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
              LR+LP LT LN+  N L  +   +G+L  L+ LD+  N + + PD +G+  AL + +
Sbjct: 59  PSSLRDLPALTELNLRANFLETVSDTLGDLVTLEVLDLRENGLSQAPDSLGNLIALTELN 118

Query: 121 CSSNQLKELPSSLGRC-----LNLSDFKA------SNNCITSLPEDLADCSKMSKLDVEG 169
            S N L  LP +L        LNLS              +T+LPE L + + +++LD+  
Sbjct: 119 LSENYLSALPDTLKNLTALTRLNLSSLGMLAPEFFPTLGLTTLPEWLGNLTDLTELDLSS 178

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+LT L   ++ + T LT L  S N L  +P+T+G+L+ L +L L+ N++ ++P ++   
Sbjct: 179 NRLTALP-EVLGNLTDLTLLNLSGNRLTTLPDTLGNLASLTKLSLYGNQLTALPETLGNL 237

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLS 288
             L E  + +N L+ LP  LG L+ L  L L+ NQL         L  L+ LDLS+N L+
Sbjct: 238 TDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTALPETLGNLTNLTELDLSSNRLT 297

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            LP  +G +T L   +   N L  +   L +     LL    +RL         TT  D 
Sbjct: 298 TLPEVLGNLTDLTTFIAHDNLLTAVPEWLGDITDLTLLGLSGNRL---------TTLPDT 348

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +   T L++    LSL G  L+A+P  +    ++T L+L  N +  LP  L     L
Sbjct: 349 LGNLTSLTM----LSLYGNQLTALPETLGNLTDLTDLELWNNRLTALPESLGDLPDL 401



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 142/266 (53%), Gaps = 23/266 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            DL +L L+ N +  L E L NL  LT+LN+S N+L+ LP  +G L  L  L +  N + 
Sbjct: 169 TDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTLGNLASLTKLSLYGNQLT 228

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+ +G+ T L + D SSN+L  LP +LG   +L+      N +T+LPE L + + +++
Sbjct: 229 ALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTALPETLGNLTNLTE 288

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N+LT L   ++ + T LT  IA  NLL  +PE +G ++ L  L L  NR+ ++P 
Sbjct: 289 LDLSSNRLTTLP-EVLGNLTDLTTFIAHDNLLTAVPEWLGDITDLTLLGLSGNRLTTLPD 347

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
           ++    SL    +  N L+ALP  LG L+                       L+ L+L N
Sbjct: 348 TLGNLTSLTMLSLYGNQLTALPETLGNLTD----------------------LTDLELWN 385

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP  +G +  L  + L+GNP+
Sbjct: 386 NRLTALPESLGDLPDLTWINLSGNPI 411



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 111/198 (56%), Gaps = 1/198 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L KL L  N +  L E L NL  LT L++S N+L+ LP  +G L  L  L +  N +  +
Sbjct: 217 LTKLSLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTAL 276

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +G+ T L + D SSN+L  LP  LG   +L+ F A +N +T++PE L D + ++ L 
Sbjct: 277 PETLGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPEWLGDITDLTLLG 336

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN+LT L + L  + T LT L    N L  +PET+G+L+ L  L+L  NR+ ++P S+
Sbjct: 337 LSGNRLTTLPDTL-GNLTSLTMLSLYGNQLTALPETLGNLTDLTDLELWNNRLTALPESL 395

Query: 227 SGCCSLAEFYMGNNALSA 244
                L    +  N + A
Sbjct: 396 GDLPDLTWINLSGNPIDA 413



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)

Query: 40  KWW-EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           +W  +  DL  L L+ N +  L + L NL  LT+L++  N+L+ LP  +G L  L  L++
Sbjct: 324 EWLGDITDLTLLGLSGNRLTTLPDTLGNLTSLTMLSLYGNQLTALPETLGNLTDLTDLEL 383

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLK 127
             N +  +P+ +G    L   + S N + 
Sbjct: 384 WNNRLTALPESLGDLPDLTWINLSGNPID 412


>gi|45657380|ref|YP_001466.1| hypothetical protein LIC11505 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087857|ref|ZP_15548692.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102412|ref|ZP_15563016.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600619|gb|AAS70103.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367526|gb|EKP22910.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410429598|gb|EKP73974.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 572

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 167/378 (44%), Gaps = 53/378 (14%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+  N   L +++  L  L  L++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG
Sbjct: 55  LSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIG 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L +     N+L   P  +G+  NL     S N +T+LP+++     +  LD++ N+
Sbjct: 115 RLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
            T+L                        P+ IG L  L  L+L  N++ ++P  I    +
Sbjct: 175 FTIL------------------------PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQN 210

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L E Y+ NN L+ LP E+G+L  L TL    N+L     E  QL+ L  L+L NN L+ L
Sbjct: 211 LQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVL 270

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK----- 345
           P EIG++  L+ L L  NPL       +    P       S L   E +E    +     
Sbjct: 271 PKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGVYRNLNLA 324

Query: 346 --EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGEITKLDLS 388
             E L     RL   +               +EL L     S +P EI     +  L L 
Sbjct: 325 QEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALG 384

Query: 389 RNSIQELPPELSSCASLQ 406
            N ++ +P E+    +L+
Sbjct: 385 LNGLKNIPSEIGQLKNLE 402



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 132/294 (44%), Gaps = 43/294 (14%)

Query: 17  SNRSLRDVPNE-VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED----LRNLPLLT 71
           SN  LR+V  + VY+N + A E     E + +  L L + N  +L        RNL  L 
Sbjct: 305 SNLDLREVAEDGVYRNLNLAQE-----EPLKVFDLRLQYKNFSQLFPKVILKFRNLRELY 359

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           + +      S LP  I  L  LK L +  N +  IP EIG    L   +  +N+L+ LP 
Sbjct: 360 LYDCG---FSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPK 416

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 417 EIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 459

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++ + I    +L E  + +N  + LP E+GK
Sbjct: 460 -------FPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGK 512

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           L KL TLDL +NQL     E  QL+ L  L L NN LS     + +   +RKLL
Sbjct: 513 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS-----LKEQERIRKLL 561



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 163/390 (41%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 164 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 224 LPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTEL----------------------------IASKNLLN 197
           ++  N L++     I      + L                            +  KN   
Sbjct: 284 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 343

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 344 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 403

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 404 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 463

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    +              +EL L     + +P EI
Sbjct: 464 IGKLENLQTLNLQRNQLT-NLTAEIGQLQ------------NLQELDLNDNQFTVLPKEI 510

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 511 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 540



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 180/429 (41%), Gaps = 46/429 (10%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKL---ILAHNNIEKLKED 63
           L+LS ++   +P E+   KN  E    D          V+LQKL    L+ N +  L  +
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL+  P  IG+L  L+ L +S N +  +P EIG    L   D  +
Sbjct: 113 IGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQN 172

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQ   LP  +G+  NL      +N + +LP ++     + +L +  N+LTVL    I   
Sbjct: 173 NQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKE-IGQL 231

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L + +N L  +P+ +G L  L  L+L  NR+  +P  I    +L +  +  N LS
Sbjct: 232 QNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 291

Query: 244 ALPAELGKLSKL---GTLDLHS----------NQLKEYCVEACQLRLSVLDLSNNSLSGL 290
               E  ++ KL     LDL            N  +E  ++   LRL   + S       
Sbjct: 292 L--KERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFS----QLF 345

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP--ENEDSEASTTK--E 346
           P  I K   LR+L L      TL   +        LKYL   L   +N  SE    K  E
Sbjct: 346 PKVILKFRNLRELYLYDCGFSTLPKEISRLKN---LKYLALGLNGLKNIPSEIGQLKNLE 402

Query: 347 DLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
            L   A  L    KE         LSL    L   P+EI +  ++ KLDLS N     P 
Sbjct: 403 ALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPK 462

Query: 398 ELSSCASLQ 406
           E+    +LQ
Sbjct: 463 EIGKLENLQ 471



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 128/281 (45%), Gaps = 40/281 (14%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + +LD+  N+L      +I     L 
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFP-AVIVELQKLE 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
            L  S+N L  +P  IG L  L  L L++N++ + P  I    +L + ++  N L+ALP 
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPK 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L TLDL +NQ      E  QL+ L  L+L +N L+ LP EIG++  L++L L 
Sbjct: 158 EIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR 217

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRL-PENEDSEASTTKEDLITMATRLSVTSKELSLE 365
            N L  L   +        L+ L++   PEN                             
Sbjct: 218 NNRLTVLPKEI------GQLQNLQTLCSPENR---------------------------- 243

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              L+A+P E+ +   +  L+L  N +  LP E+    +LQ
Sbjct: 244 ---LTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQ 281


>gi|291236280|ref|XP_002738068.1| PREDICTED: leucine rich repeat containing 40-like [Saccoglossus
            kowalevskii]
          Length = 1970

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 185/419 (44%), Gaps = 86/419 (20%)

Query: 39   DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
            D +     L++L +  N +E L  D+  L  L +L  S N ++E+      L  L+ LD+
Sbjct: 868  DDFCNLRQLRQLYIQENELECLPADMHKLDGLQLLQASQNCITEISNNTCILSELEMLDI 927

Query: 99   SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
            S N I +IPD  G    L + D S NQ++ +PSS+ +   L+ F    N ++ LP+ + D
Sbjct: 928  SHNQITEIPDTFGKLKTLNELDLSGNQIRTIPSSISQLQQLTKFAIRRNQLSELPKCIGD 987

Query: 159  CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
               + +LD+ GN++T+                        +PETIG L  L +L+L  N+
Sbjct: 988  LQLLQQLDISGNQITM------------------------VPETIGVLKELTKLELGDNQ 1023

Query: 219  ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ---- 274
            + S+  +I   C L E +  NN L+++P E+ +++ L T+ L  N++++  +  C+    
Sbjct: 1024 LTSMTPNIGLLCKLEELHARNNKLTSIPREIKRITTLRTISLRGNEIEDPPINECENYFQ 1083

Query: 275  -----------------------LRLS------------------VLDLSNNSLSGLPPE 293
                                   +RL                    LDL NN L  LP E
Sbjct: 1084 LLSNYWDEQELRILEPFDVSTRTIRLDGAQLTYVPLLIHRYTNLIELDLQNNKLHSLPLE 1143

Query: 294  IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
            I ++  L K+ L+ N L  +   +   P  + L    + + E   S              
Sbjct: 1144 ISRLNMLEKINLSNNLLSDVPDIISTLPKMSTLVLRNNNINEFPCS-------------- 1189

Query: 354  RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL-QVKFSD 411
               V+ KEL +   N+  IP++I    ++ +LD+S NS++ELP  L    +L Q+  SD
Sbjct: 1190 --IVSLKELDISNNNIQIIPTDIHTLYQLNRLDVSSNSLRELPDTLYKVTTLVQLNLSD 1246



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 171/336 (50%), Gaps = 17/336 (5%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           V++++   ++ LP  I     +KS+D+  N++ ++PD+      L K + S N  + +P+
Sbjct: 13  VIDLNGCNINALPEDIARYTRVKSIDLHDNALSELPDKFADLKTLQKLNLSFNDFRSMPT 72

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +     L+    + N +  +P +L + + +++L +  NK+  +S   I+    L +   
Sbjct: 73  PIIHLQQLTSLSVNINDLAEIPTELYNITALTELSLFKNKIQEISPG-ISKLKNLIKFNI 131

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N++  +P  IG L  L  +D+ +N++  IP S+ G   LA+F +  N +S +P E+G 
Sbjct: 132 KDNMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDGLVHLAKFDISQNHVSVIPGEIGC 191

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L++L   ++ +NQ+K+      +L+ L   D+++N L+ LP +I  M  L++L LTGN L
Sbjct: 192 LTQLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNRLTSLPRDIKSMIELKELSLTGNNL 251

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           + +   +       + +Y      E E+ E          +   + V S+++ L   +L+
Sbjct: 252 KDIPRHIYEKGIVEIRQYW-----ETEEVE----------LMKDIDVLSEDIKLGSRSLT 296

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +PS I +   +  L++S NS+  LP EL+    L+
Sbjct: 297 YLPSMIGQYTNVKALNISNNSLMSLPMELAKLQQLE 332



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 180/387 (46%), Gaps = 35/387 (9%)

Query: 39   DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
            D + +   L +L L+ N I  +   +  L  LT   +  N+LSELP  IG+L +L+ LD+
Sbjct: 937  DTFGKLKTLNELDLSGNQIRTIPSSISQLQQLTKFAIRRNQLSELPKCIGDLQLLQQLDI 996

Query: 99   SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
            S N I  +P+ IG    L K +   NQL  +  ++G    L +  A NN +TS+P ++  
Sbjct: 997  SGNQITMVPETIGVLKELTKLELGDNQLTSMTPNIGLLCKLEELHARNNKLTSIPREIKR 1056

Query: 159  CSKMSKLDVEGNKL------------TVLSN-------NLIASWTMLTELIA-SKNLLNG 198
             + +  + + GN++             +LSN        ++  + + T  I      L  
Sbjct: 1057 ITTLRTISLRGNEIEDPPINECENYFQLLSNYWDEQELRILEPFDVSTRTIRLDGAQLTY 1116

Query: 199  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
            +P  I   + LI LDL  N++ S+P  IS    L +  + NN LS +P  +  L K+ TL
Sbjct: 1117 VPLLIHRYTNLIELDLQNNKLHSLPLEISRLNMLEKINLSNNLLSDVPDIISTLPKMSTL 1176

Query: 259  DLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
             L +N + E+      L+   LD+SNN++  +P +I  +  L +L ++ N LR L  +L 
Sbjct: 1177 VLRNNNINEFPCSIVSLK--ELDISNNNIQIIPTDIHTLYQLNRLDVSSNSLRELPDTLY 1234

Query: 319  NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
               T      ++  L +N+    ST    L  +        K   +    L+ IP EI  
Sbjct: 1235 KVTT-----LVQLNLSDNQIVSISTDIRSLTNL--------KVFDISKNKLTEIPDEIGN 1281

Query: 379  AGEITKLDLSRNSIQELPPELSSCASL 405
               + +L LS N+IQ +P  ++   +L
Sbjct: 1282 LVALERLYLSSNTIQIIPSSIARLTNL 1308



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 211/459 (45%), Gaps = 72/459 (15%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--EGDKWWEAVDLQKLILAHNNIEKL 60
           R +K+      L+L+  +L+D+P  +Y    E G  E  ++WE  +++ +     +I+ L
Sbjct: 233 RDIKSMIELKELSLTGNNLKDIPRHIY----EKGIVEIRQYWETEEVELM----KDIDVL 284

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            ED++         +    L+ LP+ IG+   +K+L++S NS+M +P E+     L + +
Sbjct: 285 SEDIK---------LGSRSLTYLPSMIGQYTNVKALNISNNSLMSLPMELAKLQQLEELN 335

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S N  +++P  + +  N+      NN +T  P D+ +   + +LD+ GN ++V+ +   
Sbjct: 336 LSDNHFQQIPVHVCKIQNIQKLNMRNNMLTQFPNDIDN---LKQLDLSGNSISVIPD--- 389

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           +    L +L  S N L  +P++I  L  L   +L  N I  +   I     L    + NN
Sbjct: 390 SCQYPLAKLDISDNKLTKVPKSISQLHELEEFNLSNNAIYHVSPFIGELNQLLILDIHNN 449

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-----------LSV---------- 279
            L  LP +   L+ L  LDLH N+L E      QL+           LSV          
Sbjct: 450 KLEELPLDFWNLTSLNKLDLHENKLNEISERISQLQNLRELDLSRNNLSVVPSGCFLPQI 509

Query: 280 --LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             LD+S+N++  +P +IG+MT+L+ L L+GN +  + S++ +    + L   ++++P+  
Sbjct: 510 HSLDISDNAVIDIPSDIGQMTSLQNLNLSGNRITEIPSTVCDLYQLSHLNLKKNKIPK-- 567

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMN--LSAIPSEIWEAGEITKLDLSRNSIQEL 395
                        +   +      LS +  +  +  IPS +   G++TK  +S N +  L
Sbjct: 568 -------------LPLNIGRLHNLLSFDVSDNTIDEIPSTVGNLGKLTKFIISNNELDTL 614

Query: 396 P---PELSSCASLQVKFSDLVTNKES-CISG---CYLYW 427
           P    +L +   LQ+  + +    E  C  G    + YW
Sbjct: 615 PRAMHKLVNLNDLQIHGNPITEPTEDVCKQGLDALHFYW 653



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 191/414 (46%), Gaps = 27/414 (6%)

Query: 14   LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKLILAHNNIEKLKEDLRN 66
            L+LSN  L   P  +   KN D +      +        +L +L +++N + +L EDL  
Sbjct: 744  LHLSNNKLTIFPTNIGNVKNLDLSANKITEFSCPFPNFSNLSRLNVSNNILTQLPEDLTG 803

Query: 67   LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
            L  L  L++S NK+ E+P+ + ELH L +L+   N++  +P E+ + T L   D S N L
Sbjct: 804  LSSLEDLDISDNKIDEIPSTVSELHSLTNLNAHANNLNVVPVELCTLTNLCYLDLSKNHL 863

Query: 127  KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN--LIASWT 184
              LP        L       N +  LP D+     +  L    N +T +SNN  +++   
Sbjct: 864  SCLPDDFCNLRQLRQLYIQENELECLPADMHKLDGLQLLQASQNCITEISNNTCILSELE 923

Query: 185  MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            ML     S N +  +P+T G L  L  LDL  N+I +IPSSIS    L +F +  N LS 
Sbjct: 924  MLD---ISHNQITEIPDTFGKLKTLNELDLSGNQIRTIPSSISQLQQLTKFAIRRNQLSE 980

Query: 245  LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
            LP  +G L  L  LD+  NQ+         L+ L+ L+L +N L+ + P IG +  L +L
Sbjct: 981  LPKCIGDLQLLQQLDISGNQITMVPETIGVLKELTKLELGDNQLTSMTPNIGLLCKLEEL 1040

Query: 304  LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-----------EDLITMA 352
                N L ++   +    T   L+ +  R  E ED   +  +           E  + + 
Sbjct: 1041 HARNNKLTSIPREIKRITT---LRTISLRGNEIEDPPINECENYFQLLSNYWDEQELRIL 1097

Query: 353  TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                V+++ + L+G  L+ +P  I     + +LDL  N +  LP E+S    L+
Sbjct: 1098 EPFDVSTRTIRLDGAQLTYVPLLIHRYTNLIELDLQNNKLHSLPLEISRLNMLE 1151



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 204/460 (44%), Gaps = 51/460 (11%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYK---------NFDEAGE-GDKWWEAVDLQKLILAHNNIE 58
           +T   LNLS    R +P  +           N ++  E   + +    L +L L  N I+
Sbjct: 55  KTLQKLNLSFNDFRSMPTPIIHLQQLTSLSVNINDLAEIPTELYNITALTELSLFKNKIQ 114

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
           ++   +  L  L   N+  N ++E+PA IG+L  L+ +D+S N + +IP  +     L K
Sbjct: 115 EISPGISKLKNLIKFNIKDNMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDGLVHLAK 174

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           FD S N +  +P  +G    L  F  SNN +  +P  +     + + D+  N+LT L  +
Sbjct: 175 FDISQNHVSVIPGEIGCLTQLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNRLTSLPRD 234

Query: 179 LIASWTMLTELIASKNLLNGMP-----------------------ETIGSLSRLIRLDLH 215
            I S   L EL  + N L  +P                       + I  LS  I+L   
Sbjct: 235 -IKSMIELKELSLTGNNLKDIPRHIYEKGIVEIRQYWETEEVELMKDIDVLSEDIKLG-- 291

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
              +  +PS I    ++    + NN+L +LP EL KL +L  L+L  N  ++  V  C++
Sbjct: 292 SRSLTYLPSMIGQYTNVKALNISNNSLMSLPMELAKLQQLEELNLSDNHFQQIPVHVCKI 351

Query: 276 R-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL------VNGPTPALLKY 328
           + +  L++ NN L+  P +I     L++L L+GN +  +  S       ++     L K 
Sbjct: 352 QNIQKLNMRNNMLTQFPNDID---NLKQLDLSGNSISVIPDSCQYPLAKLDISDNKLTKV 408

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN--LSAIPSEIWEAGEITKLD 386
            +S    +E  E + +   +  ++  +   ++ L L+  N  L  +P + W    + KLD
Sbjct: 409 PKSISQLHELEEFNLSNNAIYHVSPFIGELNQLLILDIHNNKLEELPLDFWNLTSLNKLD 468

Query: 387 LSRNSIQELPPELSSCASLQVKFSDLVTNKESCI-SGCYL 425
           L  N + E+   +S   +L  +  DL  N  S + SGC+L
Sbjct: 469 LHENKLNEISERISQLQNL--RELDLSRNNLSVVPSGCFL 506



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 135/263 (51%), Gaps = 28/263 (10%)

Query: 47   LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
            L+K+ L++N +  + + +  LP ++ L + +N ++E P +I  L   K LD+S N+I  I
Sbjct: 1150 LEKINLSNNLLSDVPDIISTLPKMSTLVLRNNNINEFPCSIVSL---KELDISNNNIQII 1206

Query: 107  PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            P +I +   L + D SSN L+ELP +L +   L     S+N I S+  D+   + +   D
Sbjct: 1207 PTDIHTLYQLNRLDVSSNSLRELPDTLYKVTTLVQLNLSDNQIVSISTDIRSLTNLKVFD 1266

Query: 167  VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
            +  NKLT                         +P+ IG+L  L RL L  N I  IPSSI
Sbjct: 1267 ISKNKLT------------------------EIPDEIGNLVALERLYLSSNTIQIIPSSI 1302

Query: 227  SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
            +   +L+E  + NN +S +P  +  L+KL  L+L  NQ+K+      ++  L VLD+S+N
Sbjct: 1303 ARLTNLSELNISNNIISCIPDGIYALTKLQRLNLMRNQIKDLSESVGKMVELVVLDISHN 1362

Query: 286  SLSGLPPEIGKMTTLRKLLLTGN 308
             LS +P  I  +  L  L L GN
Sbjct: 1363 DLSIIPLSIKNLQMLEILDLQGN 1385



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 165/330 (50%), Gaps = 41/330 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL++S+ ++ D+P+++              +   LQ L L+ N I ++   + +L  L+ 
Sbjct: 511 SLDISDNAVIDIPSDI-------------GQMTSLQNLNLSGNRITEIPSTVCDLYQLSH 557

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  NK+ +LP  IG LH L S DVS N+I +IP  +G+   L KF  S+N+L  LP +
Sbjct: 558 LNLKKNKIPKLPLNIGRLHNLLSFDVSDNTIDEIPSTVGNLGKLTKFIISNNELDTLPRA 617

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCS---------KMSKLDVE---------GNKLTV 174
           + + +NL+D +   N IT   ED+             ++ K+D +          +++T+
Sbjct: 618 MHKLVNLNDLQIHGNPITEPTEDVCKQGLDALHFYWEELDKIDRDLLKDFDRSTTDEITI 677

Query: 175 LSNN------LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
              +      +I  +T L +L  S N +   P  +  L++L  LDL  N    IP SI  
Sbjct: 678 TQRDMTYIPPMIDEYTDLKKLDFSANRIATFPVELSQLNKLEELDLSDNIFQEIPVSIFQ 737

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-CVEACQLRLSVLDLSNNSL 287
              L   ++ NN L+  P  +G +     LDL +N++ E+ C       LS L++SNN L
Sbjct: 738 LGKLKILHLSNNKLTIFPTNIGNVK---NLDLSANKITEFSCPFPNFSNLSRLNVSNNIL 794

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           + LP ++  +++L  L ++ N +  + S++
Sbjct: 795 TQLPEDLTGLSSLEDLDISDNKIDEIPSTV 824



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 172/390 (44%), Gaps = 41/390 (10%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           DK+ +   LQKL L+ N+   +   + +L  LT L+V+ N L+E+P  +  +  L  L +
Sbjct: 49  DKFADLKTLQKLNLSFNDFRSMPTPIIHLQQLTSLSVNINDLAEIPTELYNITALTELSL 108

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N I +I   I     L+KF+   N + E+P+ +G+  +L +   S N +T +P+ +  
Sbjct: 109 FKNKIQEISPGISKLKNLIKFNIKDNMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDG 168

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              ++K D+  N ++V+    I   T L     S N +  +P TIG L  L R D+  NR
Sbjct: 169 LVHLAKFDISQNHVSVIPGE-IGCLTQLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNR 227

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPA--------------ELGKLSKLGTLDLHSNQ 264
           + S+P  I     L E  +  N L  +P               E  ++  +  +D+ S  
Sbjct: 228 LTSLPRDIKSMIELKELSLTGNNLKDIPRHIYEKGIVEIRQYWETEEVELMKDIDVLSED 287

Query: 265 LKEYCVEACQL--------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           +K        L         +  L++SNNSL  LP E+ K+  L +L L+ N  + +   
Sbjct: 288 IKLGSRSLTYLPSMIGQYTNVKALNISNNSLMSLPMELAKLQQLEELNLSDNHFQQIPVH 347

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +                 + ++ +    + +++T         K+L L G ++S IP   
Sbjct: 348 VC----------------KIQNIQKLNMRNNMLTQFPNDIDNLKQLDLSGNSISVIPDSC 391

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                + KLD+S N + ++P  +S    L+
Sbjct: 392 QYP--LAKLDISDNKLTKVPKSISQLHELE 419



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 176/381 (46%), Gaps = 33/381 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           +  L ++ N +  +  D+  +  L  LN+S N+++E+P+ + +L+ L  L++  N I K+
Sbjct: 509 IHSLDISDNAVIDIPSDIGQMTSLQNLNLSGNRITEIPSTVCDLYQLSHLNLKKNKIPKL 568

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG    L+ FD S N + E+PS++G    L+ F  SNN + +LP  +     ++ L 
Sbjct: 569 PLNIGRLHNLLSFDVSDNTIDEIPSTVGNLGKLTKFIISNNELDTLPRAMHKLVNLNDLQ 628

Query: 167 VEGNKLTVLSNNLIAS--------WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
           + GN +T  + ++           W  L ++   ++LL     +         + + Q  
Sbjct: 629 IHGNPITEPTEDVCKQGLDALHFYWEELDKI--DRDLLKDFDRSTTD-----EITITQRD 681

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           +  IP  I     L +     N ++  P EL +L+KL  LDL  N  +E  V   QL +L
Sbjct: 682 MTYIPPMIDEYTDLKKLDFSANRIATFPVELSQLNKLEELDLSDNIFQEIPVSIFQLGKL 741

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY---LRSRLP 334
            +L LSNN L+  P  IG +   + L L+ N +        N    + L     + ++LP
Sbjct: 742 KILHLSNNKLTIFPTNIGNV---KNLDLSANKITEFSCPFPNFSNLSRLNVSNNILTQLP 798

Query: 335 EN-------EDSEASTTKEDLI--TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           E+       ED + S  K D I  T++   S+T+       +  + +P E+     +  L
Sbjct: 799 EDLTGLSSLEDLDISDNKIDEIPSTVSELHSLTNLNAHANNL--NVVPVELCTLTNLCYL 856

Query: 386 DLSRNSIQELPPELSSCASLQ 406
           DLS+N +  LP +  +   L+
Sbjct: 857 DLSKNHLSCLPDDFCNLRQLR 877



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 19/273 (6%)

Query: 14   LNLSNRSLRDVPNEVY------------KNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
            +NLSN  L DVP+ +              N +E          V L++L +++NNI+ + 
Sbjct: 1153 INLSNNLLSDVPDIISTLPKMSTLVLRNNNINEFP-----CSIVSLKELDISNNNIQIIP 1207

Query: 62   EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
             D+  L  L  L+VS N L ELP  + ++  L  L++S N I+ I  +I S T L  FD 
Sbjct: 1208 TDIHTLYQLNRLDVSSNSLRELPDTLYKVTTLVQLNLSDNQIVSISTDIRSLTNLKVFDI 1267

Query: 122  SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
            S N+L E+P  +G  + L     S+N I  +P  +A  + +S+L++  N ++ + + + A
Sbjct: 1268 SKNKLTEIPDEIGNLVALERLYLSSNTIQIIPSSIARLTNLSELNISNNIISCIPDGIYA 1327

Query: 182  SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM-GNN 240
              T L  L   +N +  + E++G +  L+ LD+  N +  IP SI     L    + GN 
Sbjct: 1328 -LTKLQRLNLMRNQIKDLSESVGKMVELVVLDISHNDLSIIPLSIKNLQMLEILDLQGNA 1386

Query: 241  ALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
             L++LP  + +L+ L    L    ++   +  C
Sbjct: 1387 KLTSLPIGIIRLTNLNQCGLEGTTMETPPMNVC 1419


>gi|224048615|ref|XP_002195329.1| PREDICTED: leucine-rich repeat-containing protein 1 [Taeniopygia
           guttata]
          Length = 524

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L++ +N+L  LP  IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E+G+   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    ++S L
Sbjct: 212 IPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLRRLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ NKL  L+++ I     LTEL+ ++N L  +P++IG L +L  L+  +N++ S+P  
Sbjct: 272 KVDQNKLIQLTDS-IGDCESLTELVLTENQLQSLPKSIGKLKKLNNLNADRNKLTSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           + GCCSL  F + +N LS +P+E+ + ++L  LD+  N+L    +    LRL  L LS+N
Sbjct: 331 VGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPISLTTLRLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 189/409 (46%), Gaps = 51/409 (12%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAH 54
           +  R   S++  + SL  VP E+Y+          + ++  E  K +++ V L+KL L+ 
Sbjct: 9   RCNRHVESIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLVKLRKLGLSD 68

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I++L  ++ N   L  L++S N + E+P +I     L+  D S N + ++P+      
Sbjct: 69  NEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQIADFSGNPLTRLPESFPELQ 128

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L     +   L+ LP ++G   NL+  +   N +T LPE LA   ++ +LD+  N+L  
Sbjct: 129 NLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYH 188

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L   + A +  L +L    N L  +P+ +G+L  L+ LD+ +N++  +P  ISG  SL +
Sbjct: 189 LPETIGALFN-LKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTD 247

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPP 292
             +  N L  LP  +GKL +L  L +  N+L +    +  C+  L+ L L+ N L  LP 
Sbjct: 248 LLVSQNLLQVLPDGIGKLRRLSILKVDQNKLIQLTDSIGDCE-SLTELVLTENQLQSLPK 306

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            IGK+  L  L                                N D    T+    +   
Sbjct: 307 SIGKLKKLNNL--------------------------------NADRNKLTSLPKEVGGC 334

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             L+V     S+    LS IPSEI +A E+  LD++ N +  LP  L++
Sbjct: 335 CSLNV----FSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPISLTT 379



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 158/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCR 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE             E   LT LS N I+              
Sbjct: 106 ALQIADF--SGNPLTRLPESFP----------ELQNLTCLSVNDIS-------------- 139

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +PE IG+L  L  L+L +N +  +P S++    L E  +GNN L  LP  +G L  L
Sbjct: 140 LQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNL 199

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L  NQL E   E   L+ L  LD+S N L  LP EI  +T+L  LL++ N L+ L 
Sbjct: 200 KDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLP 259

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +      ++LK  +++L +  DS                S+T  EL L    L ++P 
Sbjct: 260 DGIGKLRRLSILKVDQNKLIQLTDSIGDCE-----------SLT--ELVLTENQLQSLPK 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            I +  ++  L+  RN +  LP E+  C SL V
Sbjct: 307 SIGKLKKLNNLNADRNKLTSLPKEVGGCCSLNV 339



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 111/259 (42%), Gaps = 39/259 (15%)

Query: 149 ITSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
           + ++PE++   S+ + +L ++ N+L  L          L +L  S N +  +P  I +  
Sbjct: 24  LAAVPEEIYRYSRSLEELLLDANQLRELPKPFF-QLVKLRKLGLSDNEIQRLPPEIANFM 82

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           +L+ LDL +N I  IP SIS C +L       N L+ LP    +L  L            
Sbjct: 83  QLVELDLSRNDIPEIPESISFCRALQIADFSGNPLTRLPESFPELQNL------------ 130

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                C   LSV D+S   L  LP  IG +  L  L L  N L  L  SL      A L+
Sbjct: 131 ----TC---LSVNDIS---LQALPENIGNLYNLASLELRENLLTYLPESL------AQLQ 174

Query: 328 YLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
            L    L  NE      T   L  +        K+L L+G  L+ IP E+     +  LD
Sbjct: 175 RLEELDLGNNELYHLPETIGALFNL--------KDLWLDGNQLAEIPQEVGNLKNLLCLD 226

Query: 387 LSRNSIQELPPELSSCASL 405
           +S N ++ LP E+S   SL
Sbjct: 227 VSENKLECLPEEISGLTSL 245


>gi|421136056|ref|ZP_15596167.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019790|gb|EKO86604.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 424

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/311 (33%), Positives = 154/311 (49%), Gaps = 12/311 (3%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L  +
Sbjct: 52  LDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 111

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +P+EI     L   D  S
Sbjct: 112 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGS 171

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT L N  I   
Sbjct: 172 NQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE-IEQL 230

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L   Y+ +N L 
Sbjct: 231 KNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI 290

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+ +L  L +LDL  NQL     E  QL  L  LDL NN L  LP EI ++  L+ 
Sbjct: 291 TLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQT 350

Query: 303 LLLTGNPLRTL 313
           L L+ N L TL
Sbjct: 351 LFLSNNQLTTL 361



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 153/339 (45%), Gaps = 38/339 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP+
Sbjct: 51  VLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPN 110

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT L N  I     L  L  
Sbjct: 111 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE-IEQLKNLQVLDL 169

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ I  L  L  L LH NR+ ++   I    +L    + NN L+ LP E+ +
Sbjct: 170 GSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQ 229

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L +L L  NQ   +  E  QL+ L VL L+NN ++ LP EI K+  L+ L L+ N L
Sbjct: 230 LKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQL 289

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL         P  ++ L++                            K L L    L+
Sbjct: 290 ITL---------PKEIEQLKN---------------------------LKSLDLSYNQLT 313

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            +P E+ +   +  LDL  N ++ LP E+    +LQ  F
Sbjct: 314 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLF 352



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 131/284 (46%), Gaps = 36/284 (12%)

Query: 17  SNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKEDLRN 66
           SNR L  +PNE+   KN      G      +        +LQ L L  N +  L +D+  
Sbjct: 148 SNR-LTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQ 206

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L  L  L++S+N+L+ LP  I +L  LKSL +S N     P EIG    L     ++NQ+
Sbjct: 207 LQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQI 266

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
             LP+ + +   L     S+N + +LP+++     +  LD+  N+LT+L           
Sbjct: 267 TILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTIL----------- 315

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                        P+ +G L  L  LDL  N++ ++P  I    +L   ++ NN L+ LP
Sbjct: 316 -------------PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLP 362

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
            E+G+L  L  L L  NQL     E  QL+ L  L L+NN  S 
Sbjct: 363 QEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 406



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 212 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 271

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  LKSLD+S+N +  +P E+G    L   D  
Sbjct: 272 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLR 331

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T+LP+++     +  L +  N+LT L N
Sbjct: 332 NNQLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPN 386


>gi|351706806|gb|EHB09725.1| Leucine-rich repeat protein SHOC-2 [Heterocephalus glaber]
          Length = 571

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 205/401 (51%), Gaps = 36/401 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVD-LQKLILAHNNIEKLKEDLRNLPLLTV 72
           L+L +  LR++P+ VY               +D L  L L  N I  +++D++NL  L++
Sbjct: 163 LDLRHNKLREIPSVVY--------------GLDSLTTLYLRFNRITTVEKDIKNLSKLSM 208

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  NK+ +LPA IG+L  L +LDV+ N +  +P EIG+ T +   D   N+L +LP +
Sbjct: 209 LSIRENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDT 268

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  +
Sbjct: 269 IGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLA 328

Query: 193 KNLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAE 248
           +N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP +
Sbjct: 329 RNCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLD 386

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
            G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  
Sbjct: 387 FGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEE 446

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L +L + +      A LK L+  +  N      TT    I   T L+     L L   
Sbjct: 447 NKLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGEN 493

Query: 368 NLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
            L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 494 LLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 534



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 103/200 (51%), Gaps = 3/200 (1%)

Query: 52  LAHNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI 110
           + HN I K+   +     +L+ LN+  N+L+ LP   G    +  L+++ N + KIP+++
Sbjct: 351 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 410

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
               +L     S+N LK+LP  LG    L +     N + SLP ++A    + KL +  N
Sbjct: 411 SGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNN 470

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN-RILSIPSSISGC 229
           +LT L    I   T LT L   +NLL  +PE IG+L  L  L L+ N  + S+P  ++ C
Sbjct: 471 QLTTLPRG-IGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 529

Query: 230 CSLAEFYMGNNALSALPAEL 249
             L+   + N  LS LPA++
Sbjct: 530 SKLSIMSIENCPLSHLPAQI 549



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 363 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 409

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 410 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 469

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 470 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 529

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 530 SKLSIMSIENCPLSHLPAQIVA 551


>gi|395833350|ref|XP_003789701.1| PREDICTED: leucine-rich repeat-containing protein 1 [Otolemur
           garnettii]
          Length = 524

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 188/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  DEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 136 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 195 ALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL KL                      S+L +  N L+ LP  IG   +L 
Sbjct: 255 LEMIPDGIGKLKKL----------------------SILKVDQNRLTQLPEAIGDCDSLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+  G    L  +       N D    T+    I   + L+V    
Sbjct: 293 ELVLTENRLVTLPKSI--GKLKKLSNF-------NADRNKLTSLPKEIGGCSSLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 340 FCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPFSLTA 379



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 131/241 (54%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N +  +P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    I     LTEL+ ++N L  +P++IG L +L   +  +N++ S+P  
Sbjct: 272 KVDQNRLTQLP-EAIGDCDSLTELVLTENRLVTLPKSIGKLKKLSNFNADRNKLTSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GC SL  F + +N L+ +PAE+ + ++L  LD+  N+L         L+L  L LS+N
Sbjct: 331 IGGCSSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPFSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 155/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQIADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L  +  
Sbjct: 223 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL +  ++       D +T          EL L    L  +P  
Sbjct: 261 GIGKLKKLSILKVDQNRLTQLPEAIGDC---DSLT----------ELVLTENRLVTLPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++  +  RN +  LP E+  C+SL V
Sbjct: 308 IGKLKKLSNFNADRNKLTSLPKEIGGCSSLTV 339



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 98/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L  +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALFHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|440909593|gb|ELR59482.1| Leucine-rich repeat-containing protein 1, partial [Bos grunniens
           mutus]
          Length = 516

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 189/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D + + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 21  DEVYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 67

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++P+       L     
Sbjct: 68  PEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSV 127

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 128 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 186

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 187 ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 246

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  LP  +GKL KL                      S+L +  N L+ LP  +G   +L 
Sbjct: 247 LEMLPDGIGKLKKL----------------------SILKVDQNRLTQLPEAVGDCESLT 284

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 285 ELVLTENRLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 331

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+  A E+  LD++ N +  LP  L++
Sbjct: 332 FCVRDNRLTRIPAEVSRAAELHVLDVAGNRLSHLPLSLTA 371



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 135/245 (55%), Gaps = 1/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 144 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 203

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    K+S L
Sbjct: 204 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSIL 263

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 264 KVDQNRLTQLPE-AVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 322

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L L  L LS+N
Sbjct: 323 IGGCCSLTVFCVRDNRLTRIPAEVSRAAELHVLDVAGNRLSHLPLSLTALNLKALWLSDN 382

Query: 286 SLSGL 290
               L
Sbjct: 383 QAQPL 387



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 154/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 38  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 97

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 98  ALQIADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 154

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 155 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 214

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L  L  
Sbjct: 215 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPD 252

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 253 GIGKLKKLSILKVDQNRL--TQLPEAVGDCESLT-----------ELVLTENRLLTLPKS 299

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 300 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 331



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 30  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 89

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 90  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 149

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 150 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 196

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 197 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 244


>gi|410917029|ref|XP_003971989.1| PREDICTED: leucine-rich repeat protein SHOC-2-like isoform 1
           [Takifugu rubripes]
          Length = 582

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 179/357 (50%), Gaps = 43/357 (12%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I  +++D+R+L  LT+L++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T
Sbjct: 202 NRITTVEKDIRHLSKLTMLSIRENKIKQLPAEIGELCSLVTLDVAHNQLEHLPKEIGNCT 261

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            +   D   N+L +LP ++G   +++      N ++++P  LA C ++ +L++E N ++V
Sbjct: 262 KITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISV 321

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCC 230
           L   L++S   LT L  ++N     P  +G     S +  L++  N I  IP  I S   
Sbjct: 322 LPEGLLSSLVKLTSLTLARNCFQSYP--VGGPSQFSTIYSLNMEHNCINKIPFGIFSRAK 379

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
            L++  M +N L++LP + G  + +  L+L +NQL +   + C L  L VL LSNN L  
Sbjct: 380 VLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVCGLVSLEVLILSNNLLKK 439

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP  IG +  LR+L L  N L  L         P  + YL+                DL 
Sbjct: 440 LPHGIGNLRKLRELDLEENKLECL---------PNEIAYLK----------------DL- 473

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                     ++L L    L+ +P  I     +T L L  N +Q LP E+ +  +L+
Sbjct: 474 ----------QKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLQNLPEEIGTLENLE 520



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN ++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNCINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  + +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N + ++P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLQNLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 168/401 (41%), Gaps = 70/401 (17%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           +L L+  +I  L   ++ L  L  L +  NKL  LPA +G L  L +L +S NS+  +PD
Sbjct: 104 RLDLSKRSIHMLPTSIKELTQLAELYLYSNKLQSLPAELGCLSSLVTLALSENSLTSLPD 163

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            + S   L   D   N+L+E+P+ + R   L+      N IT++ +D+   SK++ L + 
Sbjct: 164 SLDSLKKLQMLDLRHNKLREIPAVVYRLTTLTTLYLRFNRITTVEKDIRHLSKLTMLSIR 223

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            NK+  L    I     L  L  + N L  +P+ IG+ +++  LDL  N +L +P +I  
Sbjct: 224 ENKIKQLPAE-IGELCSLVTLDVAHNQLEHLPKEIGNCTKITNLDLQHNELLDLPETIGN 282

Query: 229 CCSLAEFYMGNNALSALPAELGK------------------------LSKLGTLDLHSNQ 264
             S+    +  N LSA+P  L K                        L KL +L L  N 
Sbjct: 283 LASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVKLTSLTLARNC 342

Query: 265 LKEY-------------------CVEACQLR-------LSVLDLSNNSLSGLPPEIGKMT 298
            + Y                   C+             LS L++ +N L+ LP + G  T
Sbjct: 343 FQSYPVGGPSQFSTIYSLNMEHNCINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 299 TLRKLLLTGNPLRTLRS---SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           ++ +L L  N L  +      LV+     L   L  +LP              I    +L
Sbjct: 403 SMVELNLATNQLTKIPEDVCGLVSLEVLILSNNLLKKLPHG------------IGNLRKL 450

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
               +EL LE   L  +P+EI    ++ KL L+ N +  LP
Sbjct: 451 ----RELDLEENKLECLPNEIAYLKDLQKLVLTNNQLTTLP 487



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 37/203 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  IG L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N + +LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLQNLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIAS 182
           SK+S + +E   L+ L   ++A 
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVAG 563



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 90/196 (45%), Gaps = 35/196 (17%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +P+SI     LAE Y+ +N L +LPAELG LS L T            
Sbjct: 103 MRLDLSKRSIHMLPTSIKELTQLAELYLYSNKLQSLPAELGCLSSLVT------------ 150

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                     L LS NSL+ LP  +  +  L+ L L  N LR +         PA++  L
Sbjct: 151 ----------LALSENSLTSLPDSLDSLKKLQMLDLRHNKLREI---------PAVVYRL 191

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
            +           TT E  I   ++L++    LS+    +  +P+EI E   +  LD++ 
Sbjct: 192 TTLTTLYLRFNRITTVEKDIRHLSKLTM----LSIRENKIKQLPAEIGELCSLVTLDVAH 247

Query: 390 NSIQELPPELSSCASL 405
           N ++ LP E+ +C  +
Sbjct: 248 NQLEHLPKEIGNCTKI 263



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LP+S+     L++    +N + SLP +L   S +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHMLPTSIKELTQLAELYLYSNKLQSLPAELGCLSSLVTLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  S   L  L    N L  +P  +  L+ L  L L  NRI ++   I     L    
Sbjct: 163 DSL-DSLKKLQMLDLRHNKLREIPAVVYRLTTLTTLYLRFNRITTVEKDIRHLSKLTMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCSLVTLDVAHNQLEHLPKEIGNCTKITNLDLQHNELLDLPETIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            + ++ +L L  N L  +  SL 
Sbjct: 282 NLASINRLGLRYNRLSAIPRSLA 304


>gi|328773976|gb|EGF84013.1| hypothetical protein BATDEDRAFT_21667 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 485

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 188/405 (46%), Gaps = 111/405 (27%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI------------------ 87
           +LQ+L ++HN IE+L  ++ +L  L  L + HN L+ +PA +                  
Sbjct: 103 NLQRLDISHNQIEELPIEVADLSRLKTLELHHNMLTAIPAGVLKLSGLEKLNLSFNRITE 162

Query: 88  -----GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
                G L +LK+L+VS N ++ +  EIG+ T+LV  + +SNQ+  LP  LG  L+L +F
Sbjct: 163 IDNQFGMLSLLKNLNVSNNLLVNVSAEIGTLTSLVYLNLASNQITMLPDELGNLLSLEEF 222

Query: 143 KASNN-CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL-LNGMP 200
              +N  + ++P  +++ + + K+++   KL+   + + A+W  +T+ +  +N  +  +P
Sbjct: 223 YIQDNRFLANIPSTMSNLTMLKKVNLGNLKLSTYPSAM-ATWANMTDFVVRQNANITEIP 281

Query: 201 ETIGSLS-----------------------RLIRLDLHQNRI--LSIPSSISGCCSLAEF 235
           +TIG L+                        L RLDL +N++   +IP +I+   S+   
Sbjct: 282 DTIGKLTGLKTLESQNCSIRILADDIGQLRNLTRLDLRKNQLSSFAIPYTITDWKSITHL 341

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEI 294
            +GNN+   +P E+                       CQL  L  LD S N L GLP +I
Sbjct: 342 QLGNNSFEIIPEEI-----------------------CQLYSLIDLDFSYNMLVGLPKQI 378

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           GK+T L KL L  N + +L + +      ALLK L+                   T+  R
Sbjct: 379 GKLTQLVKLCLNNNKIESLTTEI------ALLKSLQ-------------------TLEIR 413

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            +            LS +P EI E   + KLD+S N + +LPPEL
Sbjct: 414 FNA-----------LSRLPPEIGELSSLLKLDISENQLVDLPPEL 447



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 163/365 (44%), Gaps = 40/365 (10%)

Query: 68  PLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD------------------- 108
           P L  L+   N+L ++P+ I  L  L+ LD+S N+I   P                    
Sbjct: 33  PDLVKLSAHKNQLVDIPSDIVLLSKLQILDISGNNINNFPHNLPPSITIINASHNKLFIS 92

Query: 109 ----EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
               +IG    L + D S NQ++ELP  +     L   +  +N +T++P  +   S + K
Sbjct: 93  PLTPKIGMLKNLQRLDISHNQIEELPIEVADLSRLKTLELHHNMLTAIPAGVLKLSGLEK 152

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N++T + N      ++L  L  S NLL  +   IG+L+ L+ L+L  N+I  +P 
Sbjct: 153 LNLSFNRITEIDNQF-GMLSLLKNLNVSNNLLVNVSAEIGTLTSLVYLNLASNQITMLPD 211

Query: 225 SISGCCSLAEFYMGNN-ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL- 282
            +    SL EFY+ +N  L+ +P+ +  L+ L  ++L + +L  Y   A     ++ D  
Sbjct: 212 ELGNLLSLEEFYIQDNRFLANIPSTMSNLTMLKKVNLGNLKLSTYP-SAMATWANMTDFV 270

Query: 283 --SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
              N +++ +P  IGK+T L+ L      +R L   +       L    R  L +N+ S 
Sbjct: 271 VRQNANITEIPDTIGKLTGLKTLESQNCSIRILADDI-----GQLRNLTRLDLRKNQLSS 325

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
            +       T+    S+T   L L   +   IP EI +   +  LD S N +  LP ++ 
Sbjct: 326 FAIP----YTITDWKSIT--HLQLGNNSFEIIPEEICQLYSLIDLDFSYNMLVGLPKQIG 379

Query: 401 SCASL 405
               L
Sbjct: 380 KLTQL 384



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 137/316 (43%), Gaps = 72/316 (22%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L+ N I ++      L LL  LNVS+N L  + A IG L  L  L+++ N I  +
Sbjct: 150 LEKLNLSFNRITEIDNQFGMLSLLKNLNVSNNLLVNVSAEIGTLTSLVYLNLASNQITML 209

Query: 107 PDEIGSATALVKFDCSSN------------------------QLKELPSSLGRCLNLSDF 142
           PDE+G+  +L +F    N                        +L   PS++    N++DF
Sbjct: 210 PDELGNLLSLEEFYIQDNRFLANIPSTMSNLTMLKKVNLGNLKLSTYPSAMATWANMTDF 269

Query: 143 KASNNC-ITSLPE-----------------------DLADCSKMSKLDVEGNKLTVLS-N 177
               N  IT +P+                       D+     +++LD+  N+L+  +  
Sbjct: 270 VVRQNANITEIPDTIGKLTGLKTLESQNCSIRILADDIGQLRNLTRLDLRKNQLSSFAIP 329

Query: 178 NLIASWTMLT-----------------------ELIASKNLLNGMPETIGSLSRLIRLDL 214
             I  W  +T                       +L  S N+L G+P+ IG L++L++L L
Sbjct: 330 YTITDWKSITHLQLGNNSFEIIPEEICQLYSLIDLDFSYNMLVGLPKQIGKLTQLVKLCL 389

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           + N+I S+ + I+   SL    +  NALS LP E+G+LS L  LD+  NQL +   E   
Sbjct: 390 NNNKIESLTTEIALLKSLQTLEIRFNALSRLPPEIGELSSLLKLDISENQLVDLPPELYL 449

Query: 275 LRLSVLDLSNNSLSGL 290
           L    L+L  N    +
Sbjct: 450 LEGVTLELKGNHFDAV 465


>gi|255079004|ref|XP_002503082.1| predicted protein [Micromonas sp. RCC299]
 gi|226518348|gb|ACO64340.1| predicted protein [Micromonas sp. RCC299]
          Length = 333

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 174/338 (51%), Gaps = 16/338 (4%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S+  L  LPA IG+L  L +L ++ N +  +P EIG  T+L     + N+L+ LP  
Sbjct: 1   LDLSYCGLKSLPAEIGQLSDLSTLRLTGNMLFTLPSEIGFLTSLKILKLNDNRLRSLPEE 60

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN--NLIASWTMLTELI 190
           +G   +L     S N +TSL  +LA    +  L V  N+L+ L++    I   T LTEL 
Sbjct: 61  VGFLASLILLDLSGNQLTSLNAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELY 120

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
              N L  +P  I  L RL RL+L  N++ ++P  I     L E  + +N L+ LPAE+G
Sbjct: 121 LDNNKLTDLPAEIVQLERLNRLNLDNNKLTTLPPEIGQFRDLGELTLSHNQLTTLPAEIG 180

Query: 251 KLSKLGTLDLHSNQLKEYCVEAC-QLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           ++  LG L+L +NQL    +E      L  L LS N L+ LP +IG+   L  L L+ N 
Sbjct: 181 QIYTLGLLNLDNNQLTSLPLENWPATYLEKLHLSGNKLTTLPAKIGQFKDLWLLDLSRNQ 240

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L TL + +    +  +L+ L ++L        ++   ++  +A+      ++L L    L
Sbjct: 241 LTTLPAEIGQLTSLQVLRLLVNKL--------TSLPAEIGQLASL-----RKLYLSWNEL 287

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +++P+EI +   +  LDL  N +  +P E+    SL++
Sbjct: 288 TSLPAEIGQLTSLEMLDLQYNQLTSVPDEIGQLTSLEL 325



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 142/272 (52%), Gaps = 5/272 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           DL  L L  N +  L  ++  L  L +L ++ N+L  LP  +G L  L  LD+S N +  
Sbjct: 20  DLSTLRLTGNMLFTLPSEIGFLTSLKILKLNDNRLRSLPEEVGFLASLILLDLSGNQLTS 79

Query: 106 IPDEIGSATALVKFDCSSNQLK---ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  E+    +L      +NQL     LP+ +G+  +L++    NN +T LP ++    ++
Sbjct: 80  LNAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELYLDNNKLTDLPAEIVQLERL 139

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           ++L+++ NKLT L    I  +  L EL  S N L  +P  IG +  L  L+L  N++ S+
Sbjct: 140 NRLNLDNNKLTTLPPE-IGQFRDLGELTLSHNQLTTLPAEIGQIYTLGLLNLDNNQLTSL 198

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P        L + ++  N L+ LPA++G+   L  LDL  NQL     E  QL  L VL 
Sbjct: 199 PLENWPATYLEKLHLSGNKLTTLPAKIGQFKDLWLLDLSRNQLTTLPAEIGQLTSLQVLR 258

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  N L+ LP EIG++ +LRKL L+ N L +L
Sbjct: 259 LLVNKLTSLPAEIGQLASLRKLYLSWNELTSL 290



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 155/303 (51%), Gaps = 22/303 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L++  LR +P EV   F              L  L L+ N +  L  +L  L  L  L
Sbjct: 47  LKLNDNRLRSLPEEV--GF-----------LASLILLDLSGNQLTSLNAELARLKSLGYL 93

Query: 74  NVSHNKLSEL---PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           +V +N+LS L   PA IG+L  L  L +  N +  +P EI     L + +  +N+L  LP
Sbjct: 94  HVGNNQLSSLTSLPAEIGQLTSLTELYLDNNKLTDLPAEIVQLERLNRLNLDNNKLTTLP 153

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW--TMLTE 188
             +G+  +L +   S+N +T+LP ++     +  L+++ N+LT L    + +W  T L +
Sbjct: 154 PEIGQFRDLGELTLSHNQLTTLPAEIGQIYTLGLLNLDNNQLTSLP---LENWPATYLEK 210

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S N L  +P  IG    L  LDL +N++ ++P+ I    SL    +  N L++LPAE
Sbjct: 211 LHLSGNKLTTLPAKIGQFKDLWLLDLSRNQLTTLPAEIGQLTSLQVLRLLVNKLTSLPAE 270

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L+ L  L L  N+L     E  QL  L +LDL  N L+ +P EIG++T+L  L L  
Sbjct: 271 IGQLASLRKLYLSWNELTSLPAEIGQLTSLEMLDLQYNQLTSVPDEIGQLTSLELLGLGE 330

Query: 308 NPL 310
           N L
Sbjct: 331 NQL 333



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 152/294 (51%), Gaps = 30/294 (10%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           + SLP ++   S +S L + GN L  L +  I   T L  L  + N L  +PE +G L+ 
Sbjct: 8   LKSLPAEIGQLSDLSTLRLTGNMLFTLPSE-IGFLTSLKILKLNDNRLRSLPEEVGFLAS 66

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL---PAELGKLSKLGTLDLHSNQL 265
           LI LDL  N++ S+ + ++   SL   ++GNN LS+L   PAE+G+L+ L  L L +N+L
Sbjct: 67  LILLDLSGNQLTSLNAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELYLDNNKL 126

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
            +   E  QL RL+ L+L NN L+ LPPEIG+   L +L L+ N L TL + +    T  
Sbjct: 127 TDLPAEIVQLERLNRLNLDNNKLTTLPPEIGQFRDLGELTLSHNQLTTLPAEIGQIYTLG 186

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           LL         N D+   T+    + +    +   ++L L G  L+ +P++I +  ++  
Sbjct: 187 LL---------NLDNNQLTS----LPLENWPATYLEKLHLSGNKLTTLPAKIGQFKDLWL 233

Query: 385 LDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG----------CYLYWN 428
           LDLSRN +  LP E+    SLQV    L+ NK + +             YL WN
Sbjct: 234 LDLSRNQLTTLPAEIGQLTSLQVL--RLLVNKLTSLPAEIGQLASLRKLYLSWN 285



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 13/163 (7%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T G LNL N  L  +P E              W A  L+KL L+ N +  L   +     
Sbjct: 184 TLGLLNLDNNQLTSLPLEN-------------WPATYLEKLHLSGNKLTTLPAKIGQFKD 230

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L +L++S N+L+ LPA IG+L  L+ L +  N +  +P EIG   +L K   S N+L  L
Sbjct: 231 LWLLDLSRNQLTTLPAEIGQLTSLQVLRLLVNKLTSLPAEIGQLASLRKLYLSWNELTSL 290

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
           P+ +G+  +L       N +TS+P+++   + +  L +  N+L
Sbjct: 291 PAEIGQLTSLEMLDLQYNQLTSVPDEIGQLTSLELLGLGENQL 333


>gi|418703936|ref|ZP_13264818.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410766420|gb|EKR37105.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 595

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 172/385 (44%), Gaps = 30/385 (7%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+ LP E+G+L  L  L    N+L  +  E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAFPKEMGQLKNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 287 NNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGV 340

Query: 344 TK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGE 381
            +       E L     RL   +               +EL L     S +P EI     
Sbjct: 341 YRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKN 400

Query: 382 ITKLDLSRNSIQELPPELSSCASLQ 406
           +  L L  N ++++P E+    +L+
Sbjct: 401 LKYLALGLNGLKKIPSEIGQLRNLE 425



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 126/278 (45%), Gaps = 38/278 (13%)

Query: 17  SNRSLRDVPNE-VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED----LRNLPLLT 71
           SN  LR+V  + VY+N + A E     E + +  L L + N  +L        RNL  L 
Sbjct: 328 SNLDLREVAEDGVYRNLNLAQE-----EPLKVFDLRLQYKNFSQLFPKVILKFRNLRELY 382

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           + +      S LP  I  L  LK L +  N + KIP EIG    L   +  +N+L+ LP 
Sbjct: 383 LYDCG---FSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPK 439

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 440 EIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 482

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++P+ I    +L E  + +N  + LP E+GK
Sbjct: 483 -------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGK 535

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           L KL TLDL +NQL     E  QL+ L  L L NN  S
Sbjct: 536 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 162/390 (41%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L   P  +G+  NL      NN +T LP+++     +  L
Sbjct: 247 LPKEIGQLQNLQMLCSPENRLTAFPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 306

Query: 166 DVEGNKLTVLSNNLIASWTMLTEL----------------------------IASKNLLN 197
           ++  N L++     I      + L                            +  KN   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 563



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 185/461 (40%), Gaps = 87/461 (18%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-------------- 179
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L   +              
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDN 219

Query: 180 --------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                   I     L EL    N L  +P+ IG L  L  L   +NR+ + P  +    +
Sbjct: 220 QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAFPKEMGQLKN 279

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL---------KEYCVEACQLR------ 276
           L    + NN L+ LP E+G+L  L  L+L  N L         K +      LR      
Sbjct: 280 LQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDG 339

Query: 277 ------------LSVLDLS---NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---SSLV 318
                       L V DL     N     P  I K   LR+L L      TL    S L 
Sbjct: 340 VYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLK 399

Query: 319 NGPTPAL----LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---------LSLE 365
           N    AL    LK + S + +  + EA   +      A  L    KE         LSL 
Sbjct: 400 NLKYLALGLNGLKKIPSEIGQLRNLEALNLE------ANELERLPKEIGQLRNLQRLSLH 453

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              L   P+EI +  ++ KLDLS N     P E+    +LQ
Sbjct: 454 QNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494


>gi|124010573|ref|ZP_01695196.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
 gi|123982251|gb|EAY23831.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
          Length = 519

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 153/302 (50%), Gaps = 15/302 (4%)

Query: 20  SLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNK 79
           SLR +P +  K               +L+ L L +N +  L ++L +L  L  L++ +N 
Sbjct: 195 SLRQIPVQKLKKLK------------NLEVLKLNNNALRTLPKELGSLKSLKELHLQNNL 242

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           L  +P  IG+L  LK L++  N +  +P E+G    L + D  +N+LK +P  LG+   L
Sbjct: 243 LKTVPKEIGDLQQLKKLNLKMNRVEGLPKELGKLKQLEQLDLYNNRLKTVPKELGKLTAL 302

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
                S N + +LP++L +   + KL++ GN LT L  NL  +   L  L    N L G+
Sbjct: 303 KKLDLSRNRLQNLPQELTNAQALEKLNLRGNALTQLPKNL-GNLQQLKRLNLDANRLVGL 361

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           PE++G L  L  LDL +N +  +P S+ G   L    +  NAL+ LP  +GKL  L +LD
Sbjct: 362 PESLGKLKNLESLDLRENALKKLPESLGGLEKLKNLQLRKNALTKLPESIGKLQNLESLD 421

Query: 260 LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN-PLRTLRSSL 317
              N L+        L +L  ++L+ N L+ LP  +GK+  L+ L L  N  L+ L  SL
Sbjct: 422 SWGNALEGLPESIGGLKKLKKMNLAYNQLTELPESLGKLENLQTLNLWNNSTLQKLPKSL 481

Query: 318 VN 319
            N
Sbjct: 482 GN 483



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 203/445 (45%), Gaps = 64/445 (14%)

Query: 19  RSLRDVPNEVYKNFDEAGEGDKWWEA-----VDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           R+L+D P +VY+  D +G+  K           LQ+L LA + ++ +  ++  L  L ++
Sbjct: 29  RALKD-PTKVYR-LDLSGQKLKAISRNIHVFTRLQELKLAQDQLDSINSEVTALTNLQIV 86

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++SHN+L +LP  + +L  L +L+++ N I ++P  I     L   +   N +K+LP+ L
Sbjct: 87  DLSHNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGNPIKKLPAEL 146

Query: 134 GRCLNLSDFKA-------------SNNCITSLPEDLADCSKMSKLDVEG------NKLTV 174
            +   L+  KA              N   T+L E L   +++ KL++         KL  
Sbjct: 147 TQLSQLATLKADKKLLVQWEMLRKKNKLFTNLEEALKTPAQVYKLELHSLRQIPVQKLKK 206

Query: 175 LSN---------------NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           L N                 + S   L EL    NLL  +P+ IG L +L +L+L  NR+
Sbjct: 207 LKNLEVLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNLKMNRV 266

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
             +P  +     L +  + NN L  +P ELGKL+ L  LDL  N+L+    E    + L 
Sbjct: 267 EGLPKELGKLKQLEQLDLYNNRLKTVPKELGKLTALKKLDLSRNRLQNLPQELTNAQALE 326

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS------- 331
            L+L  N+L+ LP  +G +  L++L L  N L  L  SL        LK L S       
Sbjct: 327 KLNLRGNALTQLPKNLGNLQQLKRLNLDANRLVGLPESL------GKLKNLESLDLRENA 380

Query: 332 --RLPENEDSEASTTKEDLITMA-TRLSVTSKEL-SLEGMN-----LSAIPSEIWEAGEI 382
             +LPE+           L   A T+L  +  +L +LE ++     L  +P  I    ++
Sbjct: 381 LKKLPESLGGLEKLKNLQLRKNALTKLPESIGKLQNLESLDSWGNALEGLPESIGGLKKL 440

Query: 383 TKLDLSRNSIQELPPELSSCASLQV 407
            K++L+ N + ELP  L    +LQ 
Sbjct: 441 KKMNLAYNQLTELPESLGKLENLQT 465



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 118/254 (46%), Gaps = 38/254 (14%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L+L N  L+ VP E+ K                L+KL L+ N ++ L ++L N   L  
Sbjct: 281 QLDLYNNRLKTVPKELGK-------------LTALKKLDLSRNRLQNLPQELTNAQALEK 327

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N L++LP  +G L  LK L++  N ++ +P+ +G    L   D   N LK+LP S
Sbjct: 328 LNLRGNALTQLPKNLGNLQQLKRLNLDANRLVGLPESLGKLKNLESLDLRENALKKLPES 387

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           LG    L + +   N +T LPE +     +  LD               SW         
Sbjct: 388 LGGLEKLKNLQLRKNALTKLPESIGKLQNLESLD---------------SWG-------- 424

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELGK 251
            N L G+PE+IG L +L +++L  N++  +P S+    +L    + NN+ L  LP  LG 
Sbjct: 425 -NALEGLPESIGGLKKLKKMNLAYNQLTELPESLGKLENLQTLNLWNNSTLQKLPKSLGN 483

Query: 252 LSKLGTLDLHSNQL 265
           L  L +  +  ++L
Sbjct: 484 LKNLQSFKMQFDKL 497



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 132/323 (40%), Gaps = 75/323 (23%)

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI------------- 190
           A     TS    L D +K+ +LD+ G KL  +S N I  +T L EL              
Sbjct: 19  AKEKVYTSWQRALKDPTKVYRLDLSGQKLKAISRN-IHVFTRLQELKLAQDQLDSINSEV 77

Query: 191 ----------ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                      S N L  +PE +  L  L  L+L  N+I  +P+ I+    L    +  N
Sbjct: 78  TALTNLQIVDLSHNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGN 137

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKE------------------------YCVEACQLR 276
            +  LPAEL +LS+L TL      L +                        Y +E   LR
Sbjct: 138 PIKKLPAELTQLSQLATLKADKKLLVQWEMLRKKNKLFTNLEEALKTPAQVYKLELHSLR 197

Query: 277 ------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                       L VL L+NN+L  LP E+G + +L++L L  N L+T+   +  G    
Sbjct: 198 QIPVQKLKKLKNLEVLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEI--GDLQQ 255

Query: 325 LLKY-LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
           L K  L+    E    E    K+             ++L L    L  +P E+ +   + 
Sbjct: 256 LKKLNLKMNRVEGLPKELGKLKQ------------LEQLDLYNNRLKTVPKELGKLTALK 303

Query: 384 KLDLSRNSIQELPPELSSCASLQ 406
           KLDLSRN +Q LP EL++  +L+
Sbjct: 304 KLDLSRNRLQNLPQELTNAQALE 326



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 6/141 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N ++KL E L  L  L  L +  N L++LP +IG+L  L+SLD   N++  
Sbjct: 370 NLESLDLRENALKKLPESLGGLEKLKNLQLRKNALTKLPESIGKLQNLESLDSWGNALEG 429

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN-CITSLPEDLADCSKMSK 164
           +P+ IG    L K + + NQL ELP SLG+  NL      NN  +  LP+ L +   +  
Sbjct: 430 LPESIGGLKKLKKMNLAYNQLTELPESLGKLENLQTLNLWNNSTLQKLPKSLGNLKNLQS 489

Query: 165 LDVEGNKL-----TVLSNNLI 180
             ++ +KL      +L NNL+
Sbjct: 490 FKMQFDKLPLGERNLLQNNLV 510


>gi|329664482|ref|NP_001192398.1| leucine-rich repeat-containing protein 1 [Bos taurus]
 gi|296474603|tpg|DAA16718.1| TPA: PDZ-domain protein scribble-like [Bos taurus]
          Length = 524

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 189/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D + + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  DEVYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 136 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 195 ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  LP  +GKL KL                      S+L +  N L+ LP  +G   +L 
Sbjct: 255 LEMLPDGIGKLKKL----------------------SILKVDQNRLTQLPEAVGDCESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 293 ELVLTENRLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+  A E+  LD++ N +  LP  L++
Sbjct: 340 FCVRDNRLTRIPAEVSRAAELHVLDVAGNRLSHLPLSLTA 379



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 135/245 (55%), Gaps = 1/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPEA-VGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEVSRAAELHVLDVAGNRLSHLPLSLTALNLKALWLSDN 390

Query: 286 SLSGL 290
               L
Sbjct: 391 QAQPL 395



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 154/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQIADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L  L  
Sbjct: 223 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 261 GIGKLKKLSILKVDQNRL--TQLPEAVGDCESLT-----------ELVLTENRLLTLPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 308 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|418717432|ref|ZP_13277094.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787029|gb|EKR80764.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 595

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 172/385 (44%), Gaps = 30/385 (7%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+ LP E+G+L  L TL    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 287 NNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGV 340

Query: 344 TK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGE 381
            +       E L     RL   +               +EL L     S +P EI     
Sbjct: 341 YRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKN 400

Query: 382 ITKLDLSRNSIQELPPELSSCASLQ 406
           +  L L  N ++++P E+    +L+
Sbjct: 401 LKYLALGLNGLKKIPSEIGQLRNLE 425



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 126/278 (45%), Gaps = 38/278 (13%)

Query: 17  SNRSLRDVPNE-VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED----LRNLPLLT 71
           SN  LR+V  + VY+N + A E     E + +  L L + N  +L        RNL  L 
Sbjct: 328 SNLDLREVAEDGVYRNLNLAQE-----EPLKVFDLRLQYKNFSQLFPKVILKFRNLRELY 382

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           + +      S LP  I  L  LK L +  N + KIP EIG    L   +  +N+L+ LP 
Sbjct: 383 LYDCG---FSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPK 439

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 440 EIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 482

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++P+ I    +L E  + +N  + LP E+GK
Sbjct: 483 -------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGK 535

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           L KL TLDL +NQL     E  QL+ L  L L NN  S
Sbjct: 536 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 163/390 (41%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 247 LPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 306

Query: 166 DVEGNKLTVLSNNLIASWTMLTEL----------------------------IASKNLLN 197
           ++  N L++     I      + L                            +  KN   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 563



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 186/461 (40%), Gaps = 87/461 (18%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-------------- 179
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L   +              
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDN 219

Query: 180 --------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                   I     L EL    N L  +P+ IG L  L  L   +NR+ ++P  +    +
Sbjct: 220 QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKN 279

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL---------KEYCVEACQLR------ 276
           L    + NN L+ LP E+G+L  L  L+L  N L         K +      LR      
Sbjct: 280 LQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDG 339

Query: 277 ------------LSVLDLS---NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---SSLV 318
                       L V DL     N     P  I K   LR+L L      TL    S L 
Sbjct: 340 VYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLK 399

Query: 319 NGPTPAL----LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---------LSLE 365
           N    AL    LK + S + +  + EA   +      A  L    KE         LSL 
Sbjct: 400 NLKYLALGLNGLKKIPSEIGQLRNLEALNLE------ANELERLPKEIGQLRNLQRLSLH 453

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              L   P+EI +  ++ KLDLS N     P E+    +LQ
Sbjct: 454 QNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494


>gi|332711880|ref|ZP_08431810.1| Leucine Rich Repeat family protein [Moorea producens 3L]
 gi|332349208|gb|EGJ28818.1| Leucine Rich Repeat family protein [Moorea producens 3L]
          Length = 948

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/261 (37%), Positives = 140/261 (53%), Gaps = 3/261 (1%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS-SLGRCLN 138
           L+ +P  + EL  ++ L++S N I +IP+ I + T LV+ D S NQ+ +LP  + G  +N
Sbjct: 36  LTNIPEEVFELKQIRVLNLSGNRIYQIPEYISNITNLVRLDLSRNQITKLPQKNFGNFIN 95

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           L +   S N + +LPE L +   + KL +  N+L  L  +L  +   LTEL  S N LN 
Sbjct: 96  LIELDLSKNNLINLPESLGELPNLKKLYLSRNQLKKLPVSL-GNLYNLTELDLSLNKLNT 154

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
            PE++G+LS L RLDL  N +  +P  +     L E Y+ NN L+ LP  LG +  L  L
Sbjct: 155 FPESLGNLSNLSRLDLVGNNLNKLPDFLGNFYKLTELYLWNNQLTHLPESLGNILNLSKL 214

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L +NQL         L  L+ LDLS N LS LP  I  ++ L  L L+GNPL      +
Sbjct: 215 HLWNNQLTYLPKSIGNLSNLTSLDLSYNQLSKLPENIVNLSNLTHLDLSGNPLVVPPPEV 274

Query: 318 VNGPTPALLKYLRSRLPENED 338
           V+G   A+ +Y R    E +D
Sbjct: 275 VSGGVGAIKQYFRQLRKEGKD 295



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 135/255 (52%), Gaps = 19/255 (7%)

Query: 14  LNLSN----RSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           L+LSN    + L ++P EV+             E   ++ L L+ N I ++ E + N+  
Sbjct: 25  LDLSNGYRTQPLTNIPEEVF-------------ELKQIRVLNLSGNRIYQIPEYISNITN 71

Query: 70  LTVLNVSHNKLSELPAA-IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           L  L++S N++++LP    G    L  LD+S N+++ +P+ +G    L K   S NQLK+
Sbjct: 72  LVRLDLSRNQITKLPQKNFGNFINLIELDLSKNNLINLPESLGELPNLKKLYLSRNQLKK 131

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP SLG   NL++   S N + + PE L + S +S+LD+ GN L  L +  + ++  LTE
Sbjct: 132 LPVSLGNLYNLTELDLSLNKLNTFPESLGNLSNLSRLDLVGNNLNKLPD-FLGNFYKLTE 190

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L    N L  +PE++G++  L +L L  N++  +P SI    +L    +  N LS LP  
Sbjct: 191 LYLWNNQLTHLPESLGNILNLSKLHLWNNQLTYLPKSIGNLSNLTSLDLSYNQLSKLPEN 250

Query: 249 LGKLSKLGTLDLHSN 263
           +  LS L  LDL  N
Sbjct: 251 IVNLSNLTHLDLSGN 265



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 39/259 (15%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLS 207
           +T++PE++ +  ++  L++ GN++  +    I++ T L  L  S+N +  +P+   G+  
Sbjct: 36  LTNIPEEVFELKQIRVLNLSGNRIYQIPE-YISNITNLVRLDLSRNQITKLPQKNFGNFI 94

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            LI LDL +N ++++P S+    +L + Y+  N L  LP  LG L  L  LDL  N+L  
Sbjct: 95  NLIELDLSKNNLINLPESLGELPNLKKLYLSRNQLKKLPVSLGNLYNLTELDLSLNKLNT 154

Query: 268 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
           +      L  LS LDL  N+L+ LP  +G    L +L L  N L  L  SL N       
Sbjct: 155 FPESLGNLSNLSRLDLVGNNLNKLPDFLGNFYKLTELYLWNNQLTHLPESLGN------- 207

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                                ++ ++        +L L    L+ +P  I     +T LD
Sbjct: 208 ---------------------ILNLS--------KLHLWNNQLTYLPKSIGNLSNLTSLD 238

Query: 387 LSRNSIQELPPELSSCASL 405
           LS N + +LP  + + ++L
Sbjct: 239 LSYNQLSKLPENIVNLSNL 257



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 16/146 (10%)

Query: 264 QLKEYCVEACQLRLSVLDLSN----NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           + +E   EA + +L +LDLSN      L+ +P E+ ++  +R L L+GN +  +   + N
Sbjct: 9   RFREKIKEARKKKLEILDLSNGYRTQPLTNIPEEVFELKQIRVLNLSGNRIYQIPEYISN 68

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                +   +R  L  N+      TK         +++   EL L   NL  +P  + E 
Sbjct: 69  -----ITNLVRLDLSRNQ-----ITKLPQKNFGNFINLI--ELDLSKNNLINLPESLGEL 116

Query: 380 GEITKLDLSRNSIQELPPELSSCASL 405
             + KL LSRN +++LP  L +  +L
Sbjct: 117 PNLKKLYLSRNQLKKLPVSLGNLYNL 142


>gi|418744901|ref|ZP_13301246.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794232|gb|EKR92142.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 267

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 133/270 (49%), Gaps = 31/270 (11%)

Query: 68  PLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK 127
           P L  L++++N+L+ LP  IG+L  L+ L +  N +  +P+EIG+   L   +  +N+L 
Sbjct: 3   PALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLI 62

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
            LP  +G    L     +NN + +LP+++    ++  L +E N+L +L            
Sbjct: 63  TLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRIL------------ 110

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
                       P+ IG L  L  L L  NR+ ++P  I     L   Y+ NN L+ LP 
Sbjct: 111 ------------PQEIGKLQNLKELILENNRLATLPKEIGTLRKLQHLYLANNQLATLPK 158

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L  LDL  NQL     E   L RL  L L NN L  LP EIG++  L+ L L+
Sbjct: 159 EIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLS 218

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           GNP  T    +V       LK+L++ + +N
Sbjct: 219 GNPFTTFPQEIVG------LKHLKTLVLQN 242



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 126/258 (48%), Gaps = 5/258 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L LA+N +  L  ++  L  L  L + +N+L+ LP  IG L  L+SL++  N ++ +
Sbjct: 5   LKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLITL 64

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG+   L     ++NQL  LP  +G+   L      NN +  LP+++     + +L 
Sbjct: 65  PKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKELI 124

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +E N+L  L    I +   L  L  + N L  +P+ IG L  L  LDL  N+++++P  I
Sbjct: 125 LENNRLATLPKE-IGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEI 183

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
                L    + NN L  LP E+G+L  L  LDL  N    +  E   L+     L    
Sbjct: 184 GTLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGLK----HLKTLV 239

Query: 287 LSGLPPEIGKMTTLRKLL 304
           L  +P  + +   +RKLL
Sbjct: 240 LQNIPALLSEKEKIRKLL 257



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 124/264 (46%), Gaps = 38/264 (14%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           +NN +T+LP ++    K+  L +E N+LT L                        PE IG
Sbjct: 11  ANNQLTTLPNEIGKLRKLEYLRLENNRLTTL------------------------PEEIG 46

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           +L  L  L+L  NR++++P  I     L   Y+ NN L+ LP E+GKL +L  L L +NQ
Sbjct: 47  TLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQ 106

Query: 265 LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           L+    E  +L+ L  L L NN L+ LP EIG +  L+ L L  N L TL   +      
Sbjct: 107 LRILPQEIGKLQNLKELILENNRLATLPKEIGTLRKLQHLYLANNQLATLPKEI------ 160

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
             L+ L+    +  D++  T  E++ T+  RL      LSL+   L  +P EI +   + 
Sbjct: 161 GQLQNLKDL--DLSDNQLVTLPEEIGTLQ-RLEW----LSLKNNQLRTLPQEIGQLQNLK 213

Query: 384 KLDLSRNSIQELPPELSSCASLQV 407
            LDLS N     P E+     L+ 
Sbjct: 214 DLDLSGNPFTTFPQEIVGLKHLKT 237



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 108/243 (44%), Gaps = 39/243 (16%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL N  L  +P E+       G   K      L+ L L +N +  L +++  L  L  
Sbjct: 53  SLNLENNRLITLPKEI-------GTLQK------LEWLYLTNNQLATLPKEIGKLQRLEW 99

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N+L  LP  IG+L  LK L +  N +  +P EIG+   L     ++NQL  LP  
Sbjct: 100 LGLENNQLRILPQEIGKLQNLKELILENNRLATLPKEIGTLRKLQHLYLANNQLATLPKE 159

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL D   S+N + +LPE++    ++  L ++ N+L  L                 
Sbjct: 160 IGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTL----------------- 202

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+ IG L  L  LDL  N   + P  I G   L    + N  + AL +E  K+
Sbjct: 203 -------PQEIGQLQNLKDLDLSGNPFTTFPQEIVGLKHLKTLVLQN--IPALLSEKEKI 253

Query: 253 SKL 255
            KL
Sbjct: 254 RKL 256



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 96/220 (43%), Gaps = 40/220 (18%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L L  N++ ++P+ I     L    + NN L+ LP E+G L  L +L+L +N+L     E
Sbjct: 8   LHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLITLPKE 67

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
              L +L  L L+NN L+ LP EIGK+  L  L L  N LR L         P  +  L+
Sbjct: 68  IGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRIL---------PQEIGKLQ 118

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +                            KEL LE   L+ +P EI    ++  L L+ N
Sbjct: 119 N---------------------------LKELILENNRLATLPKEIGTLRKLQHLYLANN 151

Query: 391 SIQELPPELSSCASLQ-VKFSD--LVTNKESCISGCYLYW 427
            +  LP E+    +L+ +  SD  LVT  E   +   L W
Sbjct: 152 QLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEW 191


>gi|324500914|gb|ADY40414.1| Protein lap1 [Ascaris suum]
          Length = 1136

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 153/316 (48%), Gaps = 23/316 (7%)

Query: 1   MDRILKAARTSGSL------NLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAH 54
            ++IL+     GSL      +L +  L D+P E+ K               +L+ L L  
Sbjct: 69  QNKILRVPPAIGSLIALEELHLEDNELSDLPEELVK-------------CSNLKILDLRL 115

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N + +L + +  L  LT L +    L++LP  I +L  L+SLDV  N +  +P  I    
Sbjct: 116 NLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLK 175

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L + D   N+L  LP ++G    L D    +N ++++P+ L  C  +  LDV  N LT 
Sbjct: 176 HLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTA 235

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I     L EL  ++N +  +P +IG L  L+ L    N +  +  +I  C SL E
Sbjct: 236 LPKE-IGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSSLLE 294

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPP 292
            Y+ NN L+ LPA +G L +L  L +  NQL+E    +  C  +LS+L L  N L  LP 
Sbjct: 295 LYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGCS-KLSILTLRGNRLRELPL 353

Query: 293 EIGKMTTLRKLLLTGN 308
           E+G++  LR L L  N
Sbjct: 354 EVGRLANLRVLDLCDN 369



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 2/261 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L   ++ +L  D+  L  L  L+V  N+L  LP AI +L  L+ LD+  N +  +
Sbjct: 131 LTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHL 190

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +GS   L       N L  +P SL  C +L     S N +T+LP+++ D  ++ +L 
Sbjct: 191 PLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELS 250

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N++  L N+ I     L  L A  N L  +  TIG  S L+ L L  N++ ++P++I
Sbjct: 251 IAENRIAALPNS-IGRLKNLVTLKADSNALTELVPTIGECSSLLELYLFNNQLTTLPATI 309

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
            G   L+   +  N L  +P+ +G  SKL  L L  N+L+E  +E  +L  L VLDL +N
Sbjct: 310 GGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCDN 369

Query: 286 SLSGLPPEIGKMTTLRKLLLT 306
            L+ LP  I  +  LR L L+
Sbjct: 370 ILAFLPFTINVLFNLRALWLS 390



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 167/362 (46%), Gaps = 38/362 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  N I ++ E L     L  L++  NK+  +P AIG L  L+ L +  N +  +
Sbjct: 39  LEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNELSDL 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+E+   + L   D   N L  LP  + R  +L+        +T LP D+     +  LD
Sbjct: 99  PEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLD 158

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N+L +L    I     L EL   +N L+ +P  +GSL  L  L +  N + ++P S+
Sbjct: 159 VRENQLRILPP-AICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSL 217

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
           + C  L    +  N L+ALP E+G L +L  L +  N++        +L+ L  L   +N
Sbjct: 218 TSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSN 277

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           +L+ L P IG+ ++L +L L  N L TL         PA +  L+               
Sbjct: 278 ALTELVPTIGECSSLLELYLFNNQLTTL---------PATIGGLK--------------- 313

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                    LSV    LS++   L  IPS I    +++ L L  N ++ELP E+   A+L
Sbjct: 314 --------ELSV----LSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANL 361

Query: 406 QV 407
           +V
Sbjct: 362 RV 363



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 135/299 (45%), Gaps = 23/299 (7%)

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLN-LSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           G    + K  C+   L ELP+ + R  + L +     N I  +PE L  C K+  L +  
Sbjct: 13  GRVDVIEKRQCN---LHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRSLSLGQ 69

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           NK+  +    I S   L EL    N L+ +PE +   S L  LDL  N +  +P  ++  
Sbjct: 70  NKILRVPP-AIGSLIALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRL 128

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            SL   Y+   +L+ LP ++ +L  L +LD+  NQL+      CQL+ L  LDL  N LS
Sbjct: 129 SSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLRELDLGRNELS 188

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            LP  +G +  L  L +  N L  +  SL +        +LR+            ++ DL
Sbjct: 189 HLPLNMGSLEVLEDLYVDHNVLSAVPDSLTS------CGHLRT---------LDVSQNDL 233

Query: 349 ITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             +   +    +  ELS+    ++A+P+ I     +  L    N++ EL P +  C+SL
Sbjct: 234 TALPKEIGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSSL 292



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 48/97 (49%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L +L L +N +  L   +  L  L+VL++  N+L E+P+AIG    L  L +  N 
Sbjct: 288 ECSSLLELYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNR 347

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           + ++P E+G    L   D   N L  LP ++    NL
Sbjct: 348 LRELPLEVGRLANLRVLDLCDNILAFLPFTINVLFNL 384


>gi|418693267|ref|ZP_13254330.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356925|gb|EJP13083.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 595

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 172/385 (44%), Gaps = 30/385 (7%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+ LP E+G+L  L TL    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 287 NNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGV 340

Query: 344 TK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGE 381
            +       E L     RL   +               +EL L     S +P EI     
Sbjct: 341 YRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKN 400

Query: 382 ITKLDLSRNSIQELPPELSSCASLQ 406
           +  L L  N ++++P E+    +L+
Sbjct: 401 LKYLALGLNGLKKIPSEIGQLRNLE 425



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 126/278 (45%), Gaps = 38/278 (13%)

Query: 17  SNRSLRDVPNE-VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED----LRNLPLLT 71
           SN  LR+V  + VY+N + A E     E + +  L L + N  +L        RNL  L 
Sbjct: 328 SNLDLREVAEDGVYRNLNLAQE-----EPLKVFDLRLQYKNFSQLFPKVILKFRNLRELY 382

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           + +      S LP  I  L  LK L +  N + KIP EIG    L   +  +N+L+ LP 
Sbjct: 383 LYDCG---FSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPK 439

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 440 EIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 482

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++P+ I    +L E  + +N  + LP E+GK
Sbjct: 483 -------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGK 535

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           L KL TLDL +NQL     E  QL+ L  L L NN  S
Sbjct: 536 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 163/390 (41%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 247 LPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 306

Query: 166 DVEGNKLTVLSNNLIASWTMLTEL----------------------------IASKNLLN 197
           ++  N L++     I      + L                            +  KN   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 563



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 186/461 (40%), Gaps = 87/461 (18%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-------------- 179
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L   +              
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDN 219

Query: 180 --------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                   I     L EL    N L  +P+ IG L  L  L   +NR+ ++P  +    +
Sbjct: 220 QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKN 279

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL---------KEYCVEACQLR------ 276
           L    + NN L+ LP E+G+L  L  L+L  N L         K +      LR      
Sbjct: 280 LQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDG 339

Query: 277 ------------LSVLDLS---NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---SSLV 318
                       L V DL     N     P  I K   LR+L L      TL    S L 
Sbjct: 340 VYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLK 399

Query: 319 NGPTPAL----LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---------LSLE 365
           N    AL    LK + S + +  + EA   +      A  L    KE         LSL 
Sbjct: 400 NLKYLALGLNGLKKIPSEIGQLRNLEALNLE------ANELERLPKEIGQLRNLQRLSLH 453

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              L   P+EI +  ++ KLDLS N     P E+    +LQ
Sbjct: 454 QNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494


>gi|455791562|gb|EMF43369.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 380

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/299 (32%), Positives = 141/299 (47%), Gaps = 38/299 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLS   ++ +P E+ K                LQ L L  N +  L +++  L  L  
Sbjct: 99  KLNLSANQIKTIPKEIEK-------------LQKLQSLYLPKNQLTTLPQEIGQLQKLQW 145

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  IG+L  LKSL++S+N I  IP EI     L      +NQL  LP  
Sbjct: 146 LYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKE 205

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +  NL      NN +T+ P+++     +  L +  N+LTVL                 
Sbjct: 206 IEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVL----------------- 248

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+ I  L  L  LDL  N++ ++P  I    +L E  +G N L+ LP E+ +L
Sbjct: 249 -------PQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQL 301

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L TL L  NQL     E  QL+ L VL L+NN L+ LP EIG++  L++L L  N L
Sbjct: 302 KNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQL 360



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 153/336 (45%), Gaps = 38/336 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++S N+   LP  IG+L  L+ L+++ N +  +P EIG    L K + S+NQ+K +P 
Sbjct: 53  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 112

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +   L       N +T+LP+++    K+  L +  N+LT L    I     L  L  
Sbjct: 113 EIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQE-IGQLKNLKSLNL 171

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N +  +P+ I  L +L  L L  N++ ++P  I    +L   Y+GNN L+  P E+ +
Sbjct: 172 SYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQ 231

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L+ NQL     E  QL+ L +LDLS N L  LP EI ++  L++L L  N L
Sbjct: 232 LKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQL 291

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L   +                            E L  + T        L L    L+
Sbjct: 292 TVLPKEI----------------------------EQLKNLQT--------LYLGYNQLT 315

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P EI +   +  L L+ N +  LP E+    +LQ
Sbjct: 316 VLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQ 351



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 149/318 (46%), Gaps = 38/318 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           +++LD+S N    +P EIG    L + + + NQL  LP  +G+  NL     S N I ++
Sbjct: 51  VRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTI 110

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++    K+  L +  N+LT L    I     L  L   KN L  +P+ IG L  L  L
Sbjct: 111 PKEIEKLQKLQSLYLPKNQLTTLPQE-IGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSL 169

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L  N+I +IP  I     L    + NN L+ LP E+ +L  L TL L +N+L  +  E 
Sbjct: 170 NLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEI 229

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L +L L +N L+ LP EI ++  L+ L L+ N L+TL         P  ++ L++
Sbjct: 230 EQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTL---------PKEIEQLKN 280

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                       +EL+L    L+ +P EI +   +  L L  N 
Sbjct: 281 ---------------------------LQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQ 313

Query: 392 IQELPPELSSCASLQVKF 409
           +  LP E+    +L+V F
Sbjct: 314 LTVLPKEIGQLQNLKVLF 331



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 128/263 (48%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 56  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 115

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L       NQL  LP  +G+   L       N +T+LP+++     +  L++  N+
Sbjct: 116 KLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 175

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  +    I     L  L    N L  +P+ I  L  L  L L  NR+ + P  I    +
Sbjct: 176 IKTIPKE-IEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQLKN 234

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L   Y+ +N L+ LP E+ +L  L  LDL  NQLK    E  QL+ L  L+L  N L+ L
Sbjct: 235 LQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVL 294

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P EI ++  L+ L L  N L  L
Sbjct: 295 PKEIEQLKNLQTLYLGYNQLTVL 317



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 10/172 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGD-------KWWEAV-DLQKLILAHNNIEKLKE 62
           SL L N  L  +P E+   KN      G+       K  E + +LQ L L  N +  L +
Sbjct: 191 SLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQ 250

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           +++ L  L +L++S+N+L  LP  I +L  L+ L++ +N +  +P EI     L      
Sbjct: 251 EIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLG 310

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            NQL  LP  +G+  NL     +NN +T+LP+++     + +L +  N+L++
Sbjct: 311 YNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLSI 362


>gi|260841659|ref|XP_002614028.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
 gi|229299418|gb|EEN70037.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
          Length = 1609

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 187/404 (46%), Gaps = 48/404 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNN-IEKLKEDLRNLPLLTV 72
           L+LSN  LR +P EV                  L++L +A+N  ++ L  +L  +  +  
Sbjct: 322 LDLSNCHLRTLPPEVGT-------------LTQLERLKVANNRALQTLPGELWQVTNIKR 368

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S+ +L  LP  +G L  L+ LD+SFN++  +P E+G  T + + D S  QL  LP  
Sbjct: 369 LDLSNCQLHTLPPEVGTLTQLEWLDLSFNTLQTLPRELGHVTNIKRLDLSHCQLHTLPPQ 428

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  +L   K  NN + +LP +L   + +  LD        LSN     W         
Sbjct: 429 VGKLTHLKWLKVKNNPLQTLPGELGQVASIKHLD--------LSN----CW--------- 467

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
              L+ +P  +G+L++L RL +  N + ++P  +    ++    + +  L  LP E+G L
Sbjct: 468 ---LHTLPPEVGTLTQLERLKVANNPLQTLPGELWKVTNIKRLDLSSCWLDTLPPEVGTL 524

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           ++L  L L  N L+    +  QL  +  L+LS   L  LPPE+G +  L  L L GNPL+
Sbjct: 525 TQLEWLSLQGNPLQMLPKQIGQLTAIKHLNLSFCQLHTLPPEMGTLKQLEWLSLQGNPLQ 584

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK---------EDLITMATRLSVTSKEL 362
            L   + N      +     RL          T+          +L T+ TR     K L
Sbjct: 585 MLPKQVENLTHIKWMNLSHCRLQMLPPEFGKLTQLERLYLSCNGELQTLPTRQLTNIKHL 644

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            L   +L  +P E+ E   +  L LS N +Q+LPPE+    +++
Sbjct: 645 DLSNCSLQTLPPEVGELKHVEYLRLSSNPLQKLPPEVRHLTNIK 688



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 182/395 (46%), Gaps = 27/395 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS  +L+ +P E+                 ++++L L+H  +  L   +  L  L  L
Sbjct: 392 LDLSFNTLQTLPRELG-------------HVTNIKRLDLSHCQLHTLPPQVGKLTHLKWL 438

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            V +N L  LP  +G++  +K LD+S   +  +P E+G+ T L +   ++N L+ LP  L
Sbjct: 439 KVKNNPLQTLPGELGQVASIKHLDLSNCWLHTLPPEVGTLTQLERLKVANNPLQTLPGEL 498

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +  N+     S+  + +LP ++   +++  L ++GN L +L    I   T +  L  S 
Sbjct: 499 WKVTNIKRLDLSSCWLDTLPPEVGTLTQLEWLSLQGNPLQMLPKQ-IGQLTAIKHLNLSF 557

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
             L+ +P  +G+L +L  L L  N +  +P  +     +    + +  L  LP E GKL+
Sbjct: 558 CQLHTLPPEMGTLKQLEWLSLQGNPLQMLPKQVENLTHIKWMNLSHCRLQMLPPEFGKLT 617

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +L  L L  N   +         +  LDLSN SL  LPPE+G++  +  L L+ NPL+ L
Sbjct: 618 QLERLYLSCNGELQTLPTRQLTNIKHLDLSNCSLQTLPPEVGELKHVEYLRLSSNPLQKL 677

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
                    P  +++L +   ++ D       E  I + T   +  ++L L    L  +P
Sbjct: 678 ---------PPEVRHLTNI--KHLDMSNCRLNELPIEVGTMTQL--RQLDLRYNQLQMLP 724

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
            EI +   +  LD+  N +   P E+ S   + V+
Sbjct: 725 VEITQHINLYHLDVRGNPLIRPPAEVCSQGMVAVR 759



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 178/389 (45%), Gaps = 39/389 (10%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP------------------ 84
           E   L+KL L+ N   KL + L  L  L VL +S  +++ +P                  
Sbjct: 246 ELSQLEKLDLSGNKQIKLSDQLLGLTNLKVLRLSRTEMASVPEVVWKLTHLEELHLLSNP 305

Query: 85  -----AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ-LKELPSSLGRCLN 138
                  +G+L  +K LD+S   +  +P E+G+ T L +   ++N+ L+ LP  L +  N
Sbjct: 306 LQTLSVKVGQLSRIKRLDLSNCHLRTLPPEVGTLTQLERLKVANNRALQTLPGELWQVTN 365

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           +     SN  + +LP ++   +++  LD+  N L  L   L    T +  L  S   L+ 
Sbjct: 366 IKRLDLSNCQLHTLPPEVGTLTQLEWLDLSFNTLQTLPREL-GHVTNIKRLDLSHCQLHT 424

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P  +G L+ L  L +  N + ++P  +    S+    + N  L  LP E+G L++L  L
Sbjct: 425 LPPQVGKLTHLKWLKVKNNPLQTLPGELGQVASIKHLDLSNCWLHTLPPEVGTLTQLERL 484

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            + +N L+    E  ++  +  LDLS+  L  LPPE+G +T L  L L GNPL+ L   +
Sbjct: 485 KVANNPLQTLPGELWKVTNIKRLDLSSCWLDTLPPEVGTLTQLEWLSLQGNPLQMLPKQI 544

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
             G   A +K+L          +  T   ++ T+        + LSL+G  L  +P ++ 
Sbjct: 545 --GQLTA-IKHLNLSF-----CQLHTLPPEMGTLKQL-----EWLSLQGNPLQMLPKQVE 591

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQ 406
               I  ++LS   +Q LPPE      L+
Sbjct: 592 NLTHIKWMNLSHCRLQMLPPEFGKLTQLE 620



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 205/467 (43%), Gaps = 80/467 (17%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           +IL  A+   +L+LSN++ +D+P+EV++  +       + E++ L   ++   N      
Sbjct: 79  KILGKAQPLWTLDLSNQNHKDLPDEVFELEELEALKLTYNESISLSNKLVKLTN------ 132

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS-------------------- 102
                  L VL + +  L +LP  + +L  L+ LD+S N                     
Sbjct: 133 -------LKVLCLENCNLDKLPPVVLKLSHLQVLDISKNKAISLPKMILKKLKKLKVLKL 185

Query: 103 ----IMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
               ++ I  +I    + L + D S N   +LP  L    N+   + +   +T++P  + 
Sbjct: 186 RDCDLVTIGRQIFQQESQLEELDLSGNMQIDLPDELRTLKNIRVLRLNRAGMTTVPPAVL 245

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET--------------- 202
           + S++ KLD+ GNK   LS+ L+   T L  L  S+  +  +PE                
Sbjct: 246 ELSQLEKLDLSGNKQIKLSDQLLGL-TNLKVLRLSRTEMASVPEVVWKLTHLEELHLLSN 304

Query: 203 --------IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN-ALSALPAELGKLS 253
                   +G LSR+ RLDL    + ++P  +     L    + NN AL  LP EL +++
Sbjct: 305 PLQTLSVKVGQLSRIKRLDLSNCHLRTLPPEVGTLTQLERLKVANNRALQTLPGELWQVT 364

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +  LDL + QL     E   L +L  LDLS N+L  LP E+G +T +++L L+   L T
Sbjct: 365 NIKRLDLSNCQLHTLPPEVGTLTQLEWLDLSFNTLQTLPRELGHVTNIKRLDLSHCQLHT 424

Query: 313 LRSSLVNGPTPALLKYLRSR------LPENEDSEASTTKED-----LITMATRLSVTSKE 361
           L   +        LK+L+ +      LP      AS    D     L T+   +   ++ 
Sbjct: 425 LPPQVGKL---THLKWLKVKNNPLQTLPGELGQVASIKHLDLSNCWLHTLPPEVGTLTQL 481

Query: 362 LSLEGMN--LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             L+  N  L  +P E+W+   I +LDLS   +  LPPE+ +   L+
Sbjct: 482 ERLKVANNPLQTLPGELWKVTNIKRLDLSSCWLDTLPPEVGTLTQLE 528


>gi|55733633|emb|CAH93493.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 204/400 (51%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQ  +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQPTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRELRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N      TT    I   T L+     L L    
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENL 505

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 121/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQ  ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQPTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  ++ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRELRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            +++L +L L  N L  +  SL 
Sbjct: 282 NLSSLSRLGLRYNRLSAIPRSLA 304



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 87/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N   K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQPTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRELRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 199

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   ++LS+    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSKLSM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ +C   Q+   DL  N+
Sbjct: 247 HNQLEHLPKEIGNCT--QITNLDLQHNE 272


>gi|398341354|ref|ZP_10526057.1| leucine-rich repeat protein [Leptospira kirschneri serovar Bim str.
           1051]
          Length = 305

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 135/266 (50%), Gaps = 23/266 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+ +N+ + LP  IG+L  L+ L +  N + 
Sbjct: 44  LDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLT 103

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+G    L  F+ ++NQL  LP+ +G+  NL      NN +T+LP+++     +  
Sbjct: 104 TLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKEVGQLKNLYD 163

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  NKLT L          L  L  SKNLL  +P  IG L +L+ L+L  N++ ++P 
Sbjct: 164 LSLHDNKLTTLPKE-TGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPK 222

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I    SL E Y+G+N L  LP E+G+L  L  L L  NQ                    
Sbjct: 223 EIGQLQSLRELYLGDNQLKTLPKEIGQLKNLRELLLRHNQ-------------------- 262

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L+ +P EIG++  LR LLL  NP+
Sbjct: 263 --LTTVPKEIGQLKKLRWLLLDANPI 286



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 125/243 (51%), Gaps = 25/243 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  IG+L  L++L++  N    +P+EIG   +L +     NQL  LP 
Sbjct: 48  VLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPK 107

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL  F+ +NN +T+LP ++     +  LD+  N+LT L                
Sbjct: 108 EVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTL---------------- 151

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ +G L  L  L LH N++ ++P       +L    +  N L+ LP E+G+
Sbjct: 152 --------PKEVGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTILPNEIGQ 203

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL +L+L  NQL     E  QL+ L  L L +N L  LP EIG++  LR+LLL  N L
Sbjct: 204 LKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEIGQLKNLRELLLRHNQL 263

Query: 311 RTL 313
            T+
Sbjct: 264 TTV 266



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 134/281 (47%), Gaps = 19/281 (6%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           K+L  +L   L++     S   +T LP+++     +  L++  N+ T L N  I     L
Sbjct: 34  KDLTKALKNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNE-IGQLQSL 92

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
            EL    N L  +P+ +G L  L   +L+ N++ ++P+ I    +L    + NN L+ LP
Sbjct: 93  RELYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLP 152

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+G+L  L  L LH N+L     E  QL+ L +L+LS N L+ LP EIG++  L  L L
Sbjct: 153 KEVGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNL 212

Query: 306 TGNPLRTLRSSLVNGPTPALLK-YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           T N L TL   +  G   +L + YL        D++  T  +++  +        +EL L
Sbjct: 213 TYNQLTTLPKEI--GQLQSLRELYL-------GDNQLKTLPKEIGQLK-----NLRELLL 258

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
               L+ +P EI +  ++  L L  N I  LP EL      
Sbjct: 259 RHNQLTTVPKEIGQLKKLRWLLLDANPI--LPKELKRIQKF 297



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 35/215 (16%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           SK  L  +P+ IG L  L  L+L  N+  ++P+ I    SL E Y+G+N L+ LP E+G+
Sbjct: 52  SKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPKEVGQ 111

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           L                        L V +L+NN L+ LP EIGK+  L+ L L  N L 
Sbjct: 112 LK----------------------NLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLT 149

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL   +        LK L   L  +++   +  KE       R+   SK L      L+ 
Sbjct: 150 TLPKEV------GQLKNLYD-LSLHDNKLTTLPKETGQLKNLRMLNLSKNL------LTI 196

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +P+EI +  ++  L+L+ N +  LP E+    SL+
Sbjct: 197 LPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQSLR 231



 Score = 44.7 bits (104), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 37/172 (21%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           +    L+ LP E+G+L  L TL+L +NQ      E  QL+ L  L L +N L+ LP E+G
Sbjct: 51  LSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPKEVG 110

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           ++  L+   L  N L TL         PA +  L++                        
Sbjct: 111 QLKNLQVFELNNNQLTTL---------PAEIGKLKNL----------------------- 138

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
               + L L    L+ +P E+ +   +  L L  N +  LP E     +L++
Sbjct: 139 ----QHLDLWNNQLTTLPKEVGQLKNLYDLSLHDNKLTTLPKETGQLKNLRM 186


>gi|417764090|ref|ZP_12412063.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353922|gb|EJP06075.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 356

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 147/309 (47%), Gaps = 35/309 (11%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +L+LS    + +P E+   KN  E          +        +L+KL L+ N I+ + +
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +  N+L+ LP  IG+L  LKSL++S+N I  IP EI     L      
Sbjct: 112 EIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLD 171

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQL  LP  +G+  NL     S N +T+LP+++     +  L +  N+LT+L       
Sbjct: 172 NNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTIL------- 224

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                            P  IG L  L  L+L  NR+ ++   I    +L    + +N L
Sbjct: 225 -----------------PNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 267

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G+L  L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L+
Sbjct: 268 TIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQ 327

Query: 302 KLLLTGNPL 310
           +L L  N L
Sbjct: 328 ELFLNNNQL 336



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/263 (35%), Positives = 137/263 (52%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 55  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L       NQL  LP  +G+  NL     S N I ++P+++    K+  L ++ N+
Sbjct: 115 KLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT L    I     L  L  S N L  +P+ IG L  L  L L  N++  +P+ I    +
Sbjct: 175 LTTLPQE-IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKN 233

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L    + NN L+ L  E+ +L  L +LDL SNQL  +  E  QL+ L VLDL +N L+ L
Sbjct: 234 LQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTL 293

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P  IG++  L+ L L  N L TL
Sbjct: 294 PEGIGQLKNLQTLDLDSNQLTTL 316



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 129/243 (53%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++S N+   LP  IG+L  L+ L+++ N +  +P EIG    L K + S+NQ+K +P 
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +   L       N +T+LP+++     +  L++  N++  +    I     L  L  
Sbjct: 112 EIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKE-IEKLQKLQSLGL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ IG L  L  LDL  NR+ ++P  I    +L + Y+ +N L+ LP E+G+
Sbjct: 171 DNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQ 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL+L +N+L     E  QL+ L  LDL +N L+  P EIG++  L+ L L  N L
Sbjct: 231 LKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQL 290

Query: 311 RTL 313
            TL
Sbjct: 291 TTL 293



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 121/247 (48%), Gaps = 21/247 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWW---------------EAVDLQKLILAHNNI 57
            LNLS   ++ +P E+     E  +  +W                +  +L+ L L++N I
Sbjct: 98  KLNLSANQIKTIPKEI-----EKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQI 152

Query: 58  EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV 117
           + + +++  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  +P EIG    L 
Sbjct: 153 KTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQ 212

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
                SNQL  LP+ +G+  NL      NN +T+L +++     +  LD+  N+LT+   
Sbjct: 213 DLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPK 272

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
             I     L  L    N L  +PE IG L  L  LDL  N++ ++P  I    +L E ++
Sbjct: 273 E-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFL 331

Query: 238 GNNALSA 244
            NN LS+
Sbjct: 332 NNNQLSS 338



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 149/346 (43%), Gaps = 50/346 (14%)

Query: 109 EIGSATALVK----------FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           E G+ T L K           D S+N+ K LP  +G+  NL +   + N +T LP+++  
Sbjct: 33  ESGTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQ 92

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              + KL++  N++  +    I     L  L   KN L  +P+ IG L  L  L+L  N+
Sbjct: 93  LKNLRKLNLSANQIKTIPKE-IEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 151

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 278
           I +IP  I     L    + NN L+ LP E+G+L  L +LDL                  
Sbjct: 152 IKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDL------------------ 193

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NE 337
               S N L+ LP EIG +  L+ L L  N L  L + +        L    +RL   ++
Sbjct: 194 ----STNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSK 249

Query: 338 DSEASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLS 388
           + E     + L   + +L++  KE         L L    L+ +P  I +   +  LDL 
Sbjct: 250 EIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLD 309

Query: 389 RNSIQELPPELSSCASLQVKF--SDLVTNKE-----SCISGCYLYW 427
            N +  LP E+    +LQ  F  ++ ++++E       I  C +Y+
Sbjct: 310 SNQLTTLPQEIGQLQNLQELFLNNNQLSSQEKKRIRKLIPKCQIYF 355


>gi|291242572|ref|XP_002741180.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 308

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 141/276 (51%), Gaps = 25/276 (9%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +LQKL L+ N IEK+ E L  L  LT LNV +N L+ +P  I +L  +K L++S N 
Sbjct: 12  ECHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEISKLKNMKILNLSSNK 71

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           I KIPD + +   L +     N L  +P  +G+  +L+  K +NN I  +P+ L      
Sbjct: 72  IAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSLNILKLNNNKIAKIPDSL------ 125

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
                              +   LTEL    + L  +P+ IG L  +  L L +N I  I
Sbjct: 126 ------------------CALEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKI 167

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P S+     L E  M  NAL+A+P E+GKL  +  L+L SN+  +     C L +L+ L+
Sbjct: 168 PDSLCALEQLTELNMKYNALTAIPDEIGKLKSMKILNLRSNKFAKIPDSLCALEQLTELN 227

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           + +N+L+ +P EI K+ +++ L L+ N +  +  SL
Sbjct: 228 MKSNALTSIPDEISKLKSMKTLNLSANTIEKIPDSL 263



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 158/308 (51%), Gaps = 15/308 (4%)

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N +  +P EIG    L K + SSN+++++P SL     L++     N +T++P++++   
Sbjct: 1   NGLTIVPQEIGECHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEISKLK 60

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            M  L++  NK+  + ++L A    LTEL    N L  +P+ IG L  L  L L+ N+I 
Sbjct: 61  NMKILNLSSNKIAKIPDSLCA-LEQLTELYMEYNALTAIPDEIGKLKSLNILKLNNNKIA 119

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
            IP S+     L E YMG++AL+A+P  +GKL  +  L L  N++++     C L +L+ 
Sbjct: 120 KIPDSLCALEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDSLCALEQLTE 179

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L++  N+L+ +P EIGK+ +++ L L  N    +  SL           L      N  S
Sbjct: 180 LNMKYNALTAIPDEIGKLKSMKILNLRSNKFAKIPDSLC---------ALEQLTELNMKS 230

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            A T+  D I+    +    K L+L    +  IP  +    ++T+L++  N++  +P E+
Sbjct: 231 NALTSIPDEISKLKSM----KTLNLSANTIEKIPDSLCALEQLTELNMKYNALTAIPDEI 286

Query: 400 SSCASLQV 407
               S+++
Sbjct: 287 GKLKSMKI 294


>gi|421118974|ref|ZP_15579301.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348314|gb|EKO99140.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 379

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 140/299 (46%), Gaps = 38/299 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLS   ++ +P E+ K                LQ L L +N +  L +++  L  L  
Sbjct: 98  KLNLSANQIKTIPKEIEK-------------LQKLQSLYLPNNQLTTLPQEIGQLQKLQW 144

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  IG+L  LKSL++S+N I  IP EI     L      +NQL  LP  
Sbjct: 145 LYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE 204

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL      NN +T+LP+++     +  L +  N+LT+L                 
Sbjct: 205 IGQLQNLQSLYLPNNQLTTLPQEIGHLQNLQDLYLVSNQLTIL----------------- 247

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P  IG L  L  L+L  NR+ ++   I    +L    + +N L+  P E+ +L
Sbjct: 248 -------PNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQL 300

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L++L L  N L
Sbjct: 301 KNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 155/339 (45%), Gaps = 38/339 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++S N+   LP  IG+L  L+ L+++ N +  +P EIG    L K + S+NQ+K +P 
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +   L      NN +T+LP+++    K+  L +  N+LT L    I     L  L  
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQE-IGQLKNLKSLNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N +  +P+ I  L +L  L L  N++ ++P  I    +L   Y+ NN L+ LP E+G 
Sbjct: 171 SYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLPNNQLTTLPQEIGH 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L SNQL     E  QL+ L  L+L NN L+ L  EI ++  L+ L L  N L
Sbjct: 231 LQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            T          P  ++ L++                       L V    L L    L+
Sbjct: 291 TTF---------PKEIEQLKN-----------------------LQV----LDLGSNQLT 314

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            +P  I +   +  LDL  N +  LP E+    +LQ  F
Sbjct: 315 TLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELF 353



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 135/263 (51%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 55  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL  LP  +G+   L       N +T+LP+++     +  L++  N+
Sbjct: 115 KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  +    I     L  L    N L  +P+ IG L  L  L L  N++ ++P  I    +
Sbjct: 175 IKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLPNNQLTTLPQEIGHLQN 233

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L + Y+ +N L+ LP E+G+L  L TL+L +N+L     E  QL+ L  LDL +N L+  
Sbjct: 234 LQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTF 293

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P EI ++  L+ L L  N L TL
Sbjct: 294 PKEIEQLKNLQVLDLGSNQLTTL 316



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + +++  L  L  L + +N+L+ LP  IG+L  L+SL +  N +  
Sbjct: 164 NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLPNNQLTT 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ +G+  NL      NN +T+L +++     +  L
Sbjct: 224 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 284 DLRSNQLTTFPKE-IEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 342

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 343 IGQLQNLQELFLNNNQLSS 361



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 33/290 (11%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   L +     S N   +LP+++     + +L++  N+LT+L    I     L 
Sbjct: 39  DLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKE-IGQLKNLR 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           +L  S N +  +P+ I  L +L  L L  N++ ++P  I     L   Y+  N L+ LP 
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQ 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L +L+L  NQ+K    E  +L +L  L L NN L+ LP EIG++  L+ L L 
Sbjct: 158 EIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLP 217

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE----- 361
            N L TL         P  + +L++              +DL  ++ +L++   E     
Sbjct: 218 NNQLTTL---------PQEIGHLQNL-------------QDLYLVSNQLTILPNEIGQLK 255

Query: 362 ----LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
               L+L    L+ +  EI +   +  LDL  N +   P E+    +LQV
Sbjct: 256 NLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQV 305


>gi|95113664|ref|NP_060684.4| leucine-rich repeat-containing protein 1 [Homo sapiens]
 gi|50401149|sp|Q9BTT6.1|LRRC1_HUMAN RecName: Full=Leucine-rich repeat-containing protein 1; AltName:
           Full=LANO adapter protein; AltName: Full=LAP and no PDZ
           protein
 gi|14582756|gb|AAK69623.1|AF332199_1 leucine-rich repeats protein [Homo sapiens]
 gi|14701834|gb|AAK72246.1|AF359380_1 LANO adaptor protein [Homo sapiens]
 gi|13112035|gb|AAH03193.1| Leucine rich repeat containing 1 [Homo sapiens]
 gi|119624835|gb|EAX04430.1| leucine rich repeat containing 1, isoform CRA_b [Homo sapiens]
 gi|157928286|gb|ABW03439.1| leucine rich repeat containing 1 [synthetic construct]
          Length = 524

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 192/400 (48%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N++ E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 136 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 195 ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL KL                      S+L +  N L+ LP  +G+  +L 
Sbjct: 255 LETIPDGIGKLKKL----------------------SILKVDQNRLTQLPEAVGECESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 293 ELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 340 FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTA 379



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPEA-VGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 156/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N++ E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQVADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L T+  
Sbjct: 223 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 261 GIGKLKKLSILKVDQNRL--TQLPEAVGECESLT-----------ELVLTENQLLTLPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 308 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|421099998|ref|ZP_15560640.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796979|gb|EKR99096.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 310

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 136/249 (54%), Gaps = 2/249 (0%)

Query: 58  EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV 117
           + L E L+N   + +L++++N+L+ LP  IG+L  L+ L +  N +  +P++IG    L 
Sbjct: 32  QNLIEALQNPTDVLILDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQ 91

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
                 NQLK LP  +G+  NL     S+N +TSLP+D+    K+ +L ++ N+L  L  
Sbjct: 92  VLHLYDNQLKTLPKEIGQLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPK 151

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
           + I     L EL+   N L  +P+ IG L +L RL L  N++ ++P  I    +L    +
Sbjct: 152 D-IGKLQKLRELLLYNNQLTMLPKDIGQLQKLQRLHLGDNQLRTLPKDIGKLQNLRVLKL 210

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
            +N L+ LP ++GKL  L  LDL  NQL     +  +L+ L  L L+    + +P EIG+
Sbjct: 211 DSNQLATLPKDIGKLQNLQVLDLGGNQLATLPKDIGKLQNLQKLHLNGYEFTTIPKEIGQ 270

Query: 297 MTTLRKLLL 305
           +  L++L L
Sbjct: 271 LQKLQELYL 279



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 121/247 (48%), Gaps = 14/247 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L+N  L  +P ++ K               +LQKL L  N +  L ED+  L  L VL
Sbjct: 47  LDLTNNQLTTLPKDIGK-------------LQNLQKLYLDGNQLTTLPEDIGYLKELQVL 93

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L  LP  IG+L  L+ L +S N +  +P +IG    L +     NQL+ LP  +
Sbjct: 94  HLYDNQLKTLPKEIGQLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDI 153

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+   L +    NN +T LP+D+    K+ +L +  N+L  L  + I     L  L    
Sbjct: 154 GKLQKLRELLLYNNQLTMLPKDIGQLQKLQRLHLGDNQLRTLPKD-IGKLQNLRVLKLDS 212

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG L  L  LDL  N++ ++P  I    +L + ++     + +P E+G+L 
Sbjct: 213 NQLATLPKDIGKLQNLQVLDLGGNQLATLPKDIGKLQNLQKLHLNGYEFTTIPKEIGQLQ 272

Query: 254 KLGTLDL 260
           KL  L L
Sbjct: 273 KLQELYL 279



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 15/129 (11%)

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENE 337
           +LDL+NN L+ LP +IGK+  L+KL L GN L TL         P  + YL+  ++    
Sbjct: 46  ILDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTL---------PEDIGYLKELQVLHLY 96

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
           D++  T  ++ I     L V    L L    L+++P +I +  ++ +L L  N ++ LP 
Sbjct: 97  DNQLKTLPKE-IGQLQNLRV----LGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPK 151

Query: 398 ELSSCASLQ 406
           ++     L+
Sbjct: 152 DIGKLQKLR 160


>gi|158257928|dbj|BAF84937.1| unnamed protein product [Homo sapiens]
          Length = 524

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 192/400 (48%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N++ E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 136 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 195 ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL KL                      S+L +  N L+ LP  +G+  +L 
Sbjct: 255 LETIPDGIGKLKKL----------------------SILKVDQNRLTQLPEAVGECESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 293 ELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 340 FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTA 379



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPEA-VGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 156/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N++ E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQVADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L T+  
Sbjct: 223 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 261 GIGKLKKLSILKVDQNRL--TQLPEAVGECESLT-----------ELVLTENQLLTLPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 308 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|456984207|gb|EMG20322.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 319

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 132/260 (50%), Gaps = 25/260 (9%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+  N   L +++  L  L  L++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG
Sbjct: 55  LSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIG 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L +     N+L   P  +G+  NL     S N +T+LP+++     +  LD++ N+
Sbjct: 115 RLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
            T+L                        P+ IG L  L  L+L  N++ ++P  I    +
Sbjct: 175 FTIL------------------------PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQN 210

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L E Y+ NN L+ LP E+G+L  L TL    N+L     E  QL+ L  L+L NN L+ L
Sbjct: 211 LQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVL 270

Query: 291 PPEIGKMTTLRKLLLTGNPL 310
           P EIG++  L+ L L  NPL
Sbjct: 271 PKEIGQLQNLQDLELLMNPL 290



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 128/281 (45%), Gaps = 40/281 (14%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S    T+LP+++     + +LD+  N+L      +I     L 
Sbjct: 39  DLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFP-AVIVELQKLE 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
            L  S+N L  +P  IG L  L  L L++N++ + P  I    +L + ++  N L+ALP 
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPK 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L TLDL +NQ      E  QL+ L  L+L +N L+ LP EIG++  L++L L 
Sbjct: 158 EIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLR 217

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRL-PENEDSEASTTKEDLITMATRLSVTSKELSLE 365
            N L  L   +        L+ L++   PEN                             
Sbjct: 218 NNRLTVLPKEI------GQLQNLQTLCSPENR---------------------------- 243

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              L+A+P E+ +   +  L+L  N +  LP E+    +LQ
Sbjct: 244 ---LTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQ 281



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 117/262 (44%), Gaps = 34/262 (12%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKL---ILAHNNIEKLKED 63
           L+LS ++   +P E+   KN  E    D          V+LQKL    L+ N +  L  +
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL+  P  IG+L  L+ L +S N +  +P EIG    L   D  +
Sbjct: 113 IGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQN 172

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQ   LP  +G+  NL      +N + +LP ++     + +L +  N+LTVL        
Sbjct: 173 NQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVL-------- 224

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P+ IG L  L  L   +NR+ ++P  +    +L    + NN L+
Sbjct: 225 ----------------PKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLT 268

Query: 244 ALPAELGKLSKLGTLDLHSNQL 265
            LP E+G+L  L  L+L  N L
Sbjct: 269 VLPKEIGQLQNLQDLELLMNPL 290



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 65/129 (50%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 164 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 224 LPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 283

Query: 166 DVEGNKLTV 174
           ++  N L++
Sbjct: 284 ELLMNPLSL 292


>gi|418693182|ref|ZP_13254245.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|418723760|ref|ZP_13282594.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|400356840|gb|EJP12998.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|409962558|gb|EKO26292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 315

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 134/284 (47%), Gaps = 30/284 (10%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           VY N  EA +  K     D+++L LA   +  L +++  L  L  LN+  N+L+ LP  I
Sbjct: 41  VYHNLTEALQNPK-----DVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEI 95

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +SFN    +P EI     L   D + N+L  LP  + +   L      NN
Sbjct: 96  AQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLSLDNN 155

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + +LP+++     +  L + GN+LT L                        PE I  L 
Sbjct: 156 QLANLPQEITQLQNLELLFLSGNRLTTL------------------------PEEIAQLR 191

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L RL ++ NR  + P  I+    L    +G N L+ LP E+G+L  L  L L  NQL  
Sbjct: 192 SLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAI 251

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              E  QL+ L  L LS N L+ LP EIG++  L+ L+L GNP+
Sbjct: 252 LPEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPI 295



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 112/222 (50%), Gaps = 2/222 (0%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD++   +  +  EIG    L K +  SN+L  LP  + +  NL   + S N  T+L
Sbjct: 55  VRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTL 114

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+LT L    IA +  L  L    N L  +P+ I  L  L  L
Sbjct: 115 PKEIWQLQNLQHLDLNDNRLTTLPEE-IAQFQKLQWLSLDNNQLANLPQEITQLQNLELL 173

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  NR+ ++P  I+   SL   Y+  N  +  P E+ +L KL  LDL  NQL     E 
Sbjct: 174 FLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEI 233

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            +L+ L  L L  N L+ LP EI ++  L+ L+L+GN L TL
Sbjct: 234 GRLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTL 275



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 126/285 (44%), Gaps = 22/285 (7%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           +L E L +   + +LD+    LT L    I     L +L    N L  +PE I  L  L 
Sbjct: 44  NLTEALQNPKDVRQLDLAAKGLTTLLKE-IGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQ 102

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           RL L  N+  ++P  I    +L    + +N L+ LP E+ +  KL  L L +NQL     
Sbjct: 103 RLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLSLDNNQLANLPQ 162

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E  QL+ L +L LS N L+ LP EI ++ +L++L + GN   T          P  +  L
Sbjct: 163 EITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTF---------PEEITQL 213

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           +     +      TT    I     L    K L L G  L+ +P EI +   +  L LS 
Sbjct: 214 QKLQGLDLGGNQLTTLPKEIGRLQNL----KALHLGGNQLAILPEEITQLQNLQTLILSG 269

Query: 390 NSIQELPPELSSCASLQ---VKFSDLVTNKESCISG----CYLYW 427
           N +  LP E+    +LQ   +K + +V+ +   I      C +Y+
Sbjct: 270 NQLTTLPKEIGRLQNLQTLILKGNPIVSKERQRIQQLLPKCTIYF 314



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 50/105 (47%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L +  N      E++  L  L  L++  N+L+ LP  IG L  LK+L +  N +  +
Sbjct: 193 LQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAIL 252

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           P+EI     L     S NQL  LP  +GR  NL       N I S
Sbjct: 253 PEEITQLQNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPIVS 297


>gi|126273103|ref|XP_001368489.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Monodelphis
           domestica]
          Length = 582

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 201/401 (50%), Gaps = 36/401 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L +L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLIML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+   +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCIQITNLDLQHNELLDLPETI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L   L++S   L  L  ++
Sbjct: 281 GNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEGLLSSLVNLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLAKIPEDVSGLVSLEVLILSNNVLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L + +      A LK L+  +  N            +T  T L +        G N
Sbjct: 459 KLESLPNEI------AYLKDLQKLVLTNNQLNNLPRGIGHLTNLTHLGL--------GEN 504

Query: 369 LSA-IPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           L A +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 505 LLAHLPEEIGTLENLEELYLNDNPNLHGLPFELALCSKLSI 545



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNVLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N LN +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L  LP EL 
Sbjct: 479 TNNQLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEELYLNDNPNLHGLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 150/329 (45%), Gaps = 40/329 (12%)

Query: 117 VKFDCSSNQLKELPSSL-----------------------GRCLNLSDFKASNNCITSLP 153
           ++ D S   +  LPSS+                       G  +NL     S N +TSLP
Sbjct: 103 MRLDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSLP 162

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           + L +  K+  LD+  NKL  +  +++     LT L    N +  + + I +LS+LI L 
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIP-SVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLS 221

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           + +N+I  +P+ I   C+L    + +N L  LP E+G   ++  LDL  N+L +      
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGTCIQITNLDLQHNELLDLPETIG 281

Query: 274 QL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPTPALLKY 328
            L  L+ L L  N LS +P  + K + L +L L  N + TL     SSLVN  +  L + 
Sbjct: 282 NLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEGLLSSLVNLNSLTLARN 341

Query: 329 LRSRLPENEDSEAST----------TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                P    S+ ST            +    + +R  V SK L+++   L+++P +   
Sbjct: 342 CFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSK-LNMKDNQLTSLPLDFGT 400

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQV 407
              + +L+L+ N + ++P ++S   SL+V
Sbjct: 401 WTSMVELNLATNQLAKIPEDVSGLVSLEV 429



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLAKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNVLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +  LPE+                        LA C
Sbjct: 481 NQLNNLPRGIGHLTNLTHLGLGENLLAHLPEEIGTLENLEELYLNDNPNLHGLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562


>gi|387016772|gb|AFJ50505.1| Leucine-rich repeat-containing protein 1-like [Crotalus adamanteus]
          Length = 524

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 137/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E + +L  L  L++ +N+L  LP  IG L+ LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPESVAHLQRLEELDLGNNELYNLPGTIGALYNLKDLWLDGNQLAE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP EIGS   L+  D S N+L++LP  +     L+D   S N +  LP+ +    K+S L
Sbjct: 212 IPQEIGSLKNLLCLDISENKLEKLPEEINGLTALTDLLISQNLLEMLPDGVGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L+   + +   LTEL+ ++N L  +P++IG L +L  L++ +N+++S+P  
Sbjct: 272 KVDQNRLTQLT-EAVGNCECLTELVLTENQLLTLPKSIGKLKKLNILNVDRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N LS +P E+   ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLNVFSVRDNQLSRIPPEISHATELHVLDVAGNRLIHLPMSLTSLKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 186/395 (47%), Gaps = 51/395 (12%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL  VP E+Y+          + ++  E  K +++ + L+KL L+ N I++L  ++ N  
Sbjct: 23  SLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLIKLRKLGLSDNEIQRLPPEIANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L++S N + E+P +I     L+  D S N + ++P+       L     +   L+ 
Sbjct: 83  QLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFPELQNLTCLSANDISLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP ++G   NL+  +   N +T LPE +A   ++ +LD+  N+L  L   + A +  L +
Sbjct: 143 LPENIGNLYNLASLELRENLLTYLPESVAHLQRLEELDLGNNELYNLPGTIGALYN-LKD 201

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L    N L  +P+ IGSL  L+ LD+ +N++  +P  I+G  +L +  +  N L  LP  
Sbjct: 202 LWLDGNQLAEIPQEIGSLKNLLCLDISENKLEKLPEEINGLTALTDLLISQNLLEMLPDG 261

Query: 249 LGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           +GKL KL  L +  N+L +    V  C+  L+ L L+ N L  LP  IGK+  L      
Sbjct: 262 VGKLKKLSILKVDQNRLTQLTEAVGNCEC-LTELVLTENQLLTLPKSIGKLKKL------ 314

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L   R+ LV+ P                       KE  I     L+V     S+  
Sbjct: 315 -NILNVDRNKLVSLP-----------------------KE--IGGCCSLNV----FSVRD 344

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             LS IP EI  A E+  LD++ N +  LP  L+S
Sbjct: 345 NQLSRIPPEISHATELHVLDVAGNRLIHLPMSLTS 379



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 151/331 (45%), Gaps = 38/331 (11%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFQLIKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCK 105

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           +L     S N +T LPE             E   LT LS N I+              L 
Sbjct: 106 SLQVADFSGNPLTRLPESFP----------ELQNLTCLSANDIS--------------LQ 141

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +PE IG+L  L  L+L +N +  +P S++    L E  +GNN L  LP  +G L  L  
Sbjct: 142 ALPENIGNLYNLASLELRENLLTYLPESVAHLQRLEELDLGNNELYNLPGTIGALYNLKD 201

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L L  NQL E   E   L+ L  LD+S N L  LP EI  +T L  LL++ N L  L   
Sbjct: 202 LWLDGNQLAEIPQEIGSLKNLLCLDISENKLEKLPEEINGLTALTDLLISQNLLEMLPDG 261

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +      ++LK  ++RL +             +T A        EL L    L  +P  I
Sbjct: 262 VGKLKKLSILKVDQNRLTQ-------------LTEAVGNCECLTELVLTENQLLTLPKSI 308

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +  ++  L++ RN +  LP E+  C SL V
Sbjct: 309 GKLKKLNILNVDRNKLVSLPKEIGGCCSLNV 339



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 114/276 (41%), Gaps = 40/276 (14%)

Query: 133 LGRCLNLSDFKASNNC-ITSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           L RC    +     +C + ++PE++   S+ + +L ++ N+L  L          L +L 
Sbjct: 7   LWRCNRHVEMIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFF-QLIKLRKLG 65

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            S N +  +P  I +  +L+ LDL +N I  IP SIS C SL       N L+ LP    
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFP 125

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L  L  L  +   L+        L  L+ L+L  N L+ LP  +  +  L +L L  N 
Sbjct: 126 ELQNLTCLSANDISLQALPENIGNLYNLASLELRENLLTYLPESVAHLQRLEELDLGNNE 185

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L  L      G   AL                                  K+L L+G  L
Sbjct: 186 LYNLP-----GTIGALYNL-------------------------------KDLWLDGNQL 209

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           + IP EI     +  LD+S N +++LP E++   +L
Sbjct: 210 AEIPQEIGSLKNLLCLDISENKLEKLPEEINGLTAL 245


>gi|260825680|ref|XP_002607794.1| hypothetical protein BRAFLDRAFT_275098 [Branchiostoma floridae]
 gi|229293143|gb|EEN63804.1| hypothetical protein BRAFLDRAFT_275098 [Branchiostoma floridae]
          Length = 553

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 185/423 (43%), Gaps = 60/423 (14%)

Query: 36  GEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS 95
           G  D+ WE  DL++L L  N++++L ++++ L  LT L +  N L  LP  +G+L  L+S
Sbjct: 37  GLPDRLWELTDLEELHLEKNHLKELPDNIKLLKNLTTLYLHGNDLETLPPEVGQLGHLES 96

Query: 96  LDVSFNSIMKIPDE-----------------IGSATA--------LVKFDCSSNQLKELP 130
           LDVS N   KIP E                 +G            L     + NQL +LP
Sbjct: 97  LDVSNNPEFKIPLEHLLQLRQLKVLRLHNLHLGQVPEDILKWLLNLEILGLNGNQLVDLP 156

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
               R   L +    NN  ++LP  +   S ++ LD+EGNKL  L N  I     L E+ 
Sbjct: 157 IYTVRLNKLKELHLRNNNFSTLPVHVCSLSALTTLDLEGNKLHDLPNE-IVQLVNLQEVY 215

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE---------------- 234
              N  + +P  + +L  +  L+LH N +  IP  I     L E                
Sbjct: 216 LQNNFFHHLPVQLCALGNIAVLELHGNHVKEIPPDICRLAKLREVNFSNNKIEKLPKEVG 275

Query: 235 -------FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNS 286
                   Y  +N L +LP   G+L +L  +D   N+ +E  V  C L  L+VL + +N+
Sbjct: 276 ALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFAQNRFEEMPVSLCMLGNLAVLAMDDNN 335

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
           L  +P E+  +  L++L L+GN       ++ N P+      L       +  +  T+  
Sbjct: 336 LYHIPKEVANLRKLKELGLSGNVFEKFPEAICNLPS------LEKLFLGQDHGQQLTSVP 389

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             I+  T L    ++L LE   L+ +P  I +   +++L    N +Q+LP  +    +L+
Sbjct: 390 STISKLTSL----QDLCLEYNALTTLPDSISQLPALSRLSCHDNYLQKLPDSICELKALK 445

Query: 407 VKF 409
             +
Sbjct: 446 YLY 448



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 38/305 (12%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAVDLQ--------KLILAHNNIEKLKE 62
           +L+L    L D+PNE+ +  N  E    + ++  + +Q         L L  N+++++  
Sbjct: 190 TLDLEGNKLHDLPNEIVQLVNLQEVYLQNNFFHHLPVQLCALGNIAVLELHGNHVKEIPP 249

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           D+  L  L  +N S+NK+ +LP  +G L  L+ L    N +  +P   G    L   D +
Sbjct: 250 DICRLAKLREVNFSNNKIEKLPKEVGALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFA 309

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N+ +E+P SL    NL+     +N +  +P+++A+  K+ +L + G             
Sbjct: 310 QNRFEEMPVSLCMLGNLAVLAMDDNNLYHIPKEVANLRKLKELGLSG------------- 356

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDL---HQNRILSIPSSISGCCSLAEFYMGN 239
                      N+    PE I +L  L +L L   H  ++ S+PS+IS   SL +  +  
Sbjct: 357 -----------NVFEKFPEAICNLPSLEKLFLGQDHGQQLTSVPSTISKLTSLQDLCLEY 405

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           NAL+ LP  + +L  L  L  H N L++     C+L+ L  L L NN L+ LP +   +T
Sbjct: 406 NALTTLPDSISQLPALSRLSCHDNYLQKLPDSICELKALKYLYLHNNLLTALPSDFDFLT 465

Query: 299 TLRKL 303
           TL++L
Sbjct: 466 TLKEL 470



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHN---KLSELPAAIGELHMLKSLDVSFNSI 103
           L++L L+ N  EK  E + NLP L  L +  +   +L+ +P+ I +L  L+ L + +N++
Sbjct: 349 LKELGLSGNVFEKFPEAICNLPSLEKLFLGQDHGQQLTSVPSTISKLTSLQDLCLEYNAL 408

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             +PD I    AL +  C  N L++LP S+     L      NN +T+LP D    + + 
Sbjct: 409 TTLPDSISQLPALSRLSCHDNYLQKLPDSICELKALKYLYLHNNLLTALPSDFDFLTTLK 468

Query: 164 KLDVEGNKLT 173
           +L ++  K  
Sbjct: 469 ELRIDAEKFA 478



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 87/196 (44%), Gaps = 20/196 (10%)

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           Q+ +  +P  +     L E ++  N L  LP  +  L  L TL LH N L+    E  QL
Sbjct: 32  QHGLEGLPDRLWELTDLEELHLEKNHLKELPDNIKLLKNLTTLYLHGNDLETLPPEVGQL 91

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR-SSLVNGPTPA-LLKYLRSR 332
             L  LD+SNN    +P E   +  LR+       L+ LR  +L  G  P  +LK+L + 
Sbjct: 92  GHLESLDVSNNPEFKIPLE--HLLQLRQ-------LKVLRLHNLHLGQVPEDILKWLLNL 142

Query: 333 --LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L  N +        DL     RL+   KEL L   N S +P  +     +T LDL  N
Sbjct: 143 EILGLNGNQLV-----DLPIYTVRLN-KLKELHLRNNNFSTLPVHVCSLSALTTLDLEGN 196

Query: 391 SIQELPPELSSCASLQ 406
            + +LP E+    +LQ
Sbjct: 197 KLHDLPNEIVQLVNLQ 212


>gi|147903968|ref|NP_001088252.1| uncharacterized protein LOC495083 [Xenopus laevis]
 gi|54038577|gb|AAH84248.1| LOC495083 protein [Xenopus laevis]
          Length = 524

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L+V +N+L +LP  IG L+ LK L +  N +  
Sbjct: 152 NLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYDLPETIGSLYKLKDLWLDGNQLAD 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S+N I  LP+ +     +S L
Sbjct: 212 LPPEIGNLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSIEVLPDGIGKLKNLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+L  L++  I     LTE+I ++N L  +P +IG L +L  L++ +N+++S+P+ 
Sbjct: 272 KVDQNRLMQLTD-CIGECESLTEVILTENQLLVLPRSIGKLKKLCNLNIDRNKLMSLPNE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F +  N LS LP+E+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLNVFCVRENRLSRLPSEIAQATELHVLDVAGNRLTHLPLSLTSLKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 191/409 (46%), Gaps = 51/409 (12%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILAH 54
           +  R   S++ ++ SL  VP E+Y+      E             ++++ V L+KL L+ 
Sbjct: 9   RCNRHVESVDKTHCSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVQLRKLGLSD 68

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I++L  ++ N   L  L++S N++ E+P +I     L+  D S N + ++P+     +
Sbjct: 69  NEIQRLPPEIANFMQLVELDLSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPDLS 128

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L+    +   L+ LP ++G   NL   +   N +T LPE LA   ++ +LDV  N+L  
Sbjct: 129 SLICLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYD 188

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I S   L +L    N L  +P  IG+L  L+ LDL +N++  +P  ISG  SL +
Sbjct: 189 LPET-IGSLYKLKDLWLDGNQLADLPPEIGNLKNLLCLDLSENKLERLPEEISGLKSLTD 247

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPP 292
             + +N++  LP  +GKL  L  L +  N+L +   C+  C+  L+ + L+ N L  LP 
Sbjct: 248 LLVSHNSIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECE-SLTEVILTENQLLVLPR 306

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            IGK+  L  L +  N L +L +                                 I   
Sbjct: 307 SIGKLKKLCNLNIDRNKLMSLPNE--------------------------------IGGC 334

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             L+V      +    LS +PSEI +A E+  LD++ N +  LP  L+S
Sbjct: 335 CSLNV----FCVRENRLSRLPSEIAQATELHVLDVAGNRLTHLPLSLTS 379



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 157/335 (46%), Gaps = 46/335 (13%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N++ E+P S+  C 
Sbjct: 46  NQLRELPKQFFQLVQLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNEIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   D S +  L +    L VL                    
Sbjct: 106 ALQVADF--SGNPLTRLPESFPDLSSLICLSINDISLQVL-------------------- 143

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
               PE IG+LS L+ L+L +N +  +P S++    L E  +GNN L  LP  +G L KL
Sbjct: 144 ----PENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYDLPETIGSLYKL 199

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L  NQL +   E   L+ L  LDLS N L  LP EI  + +L  LL++ N +  L 
Sbjct: 200 KDLWLDGNQLADLPPEIGNLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSIEVLP 259

Query: 315 SSLVNGPTPALLKYLRSRLPENED--SEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
             +      ++LK  ++RL +  D   E  +  E ++T    L                +
Sbjct: 260 DGIGKLKNLSILKVDQNRLMQLTDCIGECESLTEVILTENQLL---------------VL 304

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           P  I +  ++  L++ RN +  LP E+  C SL V
Sbjct: 305 PRSIGKLKKLCNLNIDRNKLMSLPNEIGGCCSLNV 339



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 110/256 (42%), Gaps = 37/256 (14%)

Query: 151 SLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           ++PE++   S+ + +L ++ N+L  L          L +L  S N +  +P  I +  +L
Sbjct: 26  AVPEEIYRYSRSLEELLLDANQLRELPKQFF-QLVQLRKLGLSDNEIQRLPPEIANFMQL 84

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           + LDL +N I  IP SIS C +L       N L+ LP     LS L             C
Sbjct: 85  VELDLSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPDLSSL------------IC 132

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                  LS+ D+S   L  LP  IG ++ L  L L  N L  L  SL       L +  
Sbjct: 133 -------LSINDIS---LQVLPENIGNLSNLVSLELRENLLTFLPESLAQ-----LHRLE 177

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
              +  NE  +   T   L  +        K+L L+G  L+ +P EI     +  LDLS 
Sbjct: 178 ELDVGNNELYDLPETIGSLYKL--------KDLWLDGNQLADLPPEIGNLKNLLCLDLSE 229

Query: 390 NSIQELPPELSSCASL 405
           N ++ LP E+S   SL
Sbjct: 230 NKLERLPEEISGLKSL 245


>gi|308504609|ref|XP_003114488.1| CRE-LET-413 protein [Caenorhabditis remanei]
 gi|308261873|gb|EFP05826.1| CRE-LET-413 protein [Caenorhabditis remanei]
          Length = 772

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 17/302 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+  ++ D+P E  KN        K+     L  L L  N   +L E +     +T+L
Sbjct: 87  LNLNRNTITDIP-ETLKNC-------KF-----LTNLNLNGNPFTRLPESICECSSITIL 133

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +++   L+ LPA IG L  L+ L+   N +  IP  I     L + D   N++++LP+ +
Sbjct: 134 SLNDTTLTSLPANIGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLGQNEIEDLPAKI 193

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L +F A  N + +LP+ ++DC  + +LDV  N++  L  NL  S + LT+L  S 
Sbjct: 194 GKLTSLREFYADMNNLGTLPDSISDCRMLDQLDVSENQINRLPENL-GSMSSLTDLNVSM 252

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +P +IG+L RL  L + +N +  +   I  C +L E Y+G N L+ LP  +G L 
Sbjct: 253 NDIPELPRSIGNLKRLQMLKVERNNLTQLTPEIGHCSALTELYLGQNMLTDLPDSIGDLK 312

Query: 254 KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            L TL++  N L E    + +C+  L+VL L  N +S LP  IGK   +  L +  N L 
Sbjct: 313 NLTTLNVDCNNLIEIPETIGSCK-SLTVLSLRQNLISELPMTIGKCENMTVLDVASNKLT 371

Query: 312 TL 313
           +L
Sbjct: 372 SL 373



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 174/365 (47%), Gaps = 17/365 (4%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           + +N++ +  D+     L  LN++ N + EL   +  L  L+ LDVS N +  +P +IG 
Sbjct: 21  SQSNLQSVPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRHLRILDVSDNEVSVLPPDIGQ 80

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            T L++ + + N + ++P +L  C  L++   + N  T LPE + +CS ++ L +    L
Sbjct: 81  LTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPESICECSSITILSLNDTTL 140

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           T L  N I S   L  L A +N L  +P +I  L +L  LDL QN I  +P+ I    SL
Sbjct: 141 TSLPAN-IGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLGQNEIEDLPAKIGKLTSL 199

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
            EFY   N L  LP  +     L  LD+  NQ+         +  L+ L++S N +  LP
Sbjct: 200 REFYADMNNLGTLPDSISDCRMLDQLDVSENQINRLPENLGSMSSLTDLNVSMNDIPELP 259

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             IG +  L+ L +  N L  L   +  G   AL +     L +N  ++   +  DL  +
Sbjct: 260 RSIGNLKRLQMLKVERNNLTQLTPEI--GHCSALTELY---LGQNMLTDLPDSIGDLKNL 314

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
            T        L+++  NL  IP  I     +T L L +N I ELP  +  C ++ V   D
Sbjct: 315 TT--------LNVDCNNLIEIPETIGSCKSLTVLSLRQNLISELPMTIGKCENMTVL--D 364

Query: 412 LVTNK 416
           + +NK
Sbjct: 365 VASNK 369



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 112/224 (50%), Gaps = 1/224 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L++L L  N IE L   +  L  L       N L  LP +I +  ML  LDVS N 
Sbjct: 172 ELKQLEELDLGQNEIEDLPAKIGKLTSLREFYADMNNLGTLPDSISDCRMLDQLDVSENQ 231

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           I ++P+ +GS ++L   + S N + ELP S+G    L   K   N +T L  ++  CS +
Sbjct: 232 INRLPENLGSMSSLTDLNVSMNDIPELPRSIGNLKRLQMLKVERNNLTQLTPEIGHCSAL 291

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           ++L +  N LT L ++ I     LT L    N L  +PETIGS   L  L L QN I  +
Sbjct: 292 TELYLGQNMLTDLPDS-IGDLKNLTTLNVDCNNLIEIPETIGSCKSLTVLSLRQNLISEL 350

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           P +I  C ++    + +N L++LP  +  L KL  L L  NQ +
Sbjct: 351 PMTIGKCENMTVLDVASNKLTSLPFTVKVLYKLQALWLSENQTQ 394



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 111/251 (44%), Gaps = 39/251 (15%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           +A    +  L  S++ L  +P  I    +L  L+L  N I  +   +     L    + +
Sbjct: 9   MACQRQVDSLDRSQSNLQSVPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRHLRILDVSD 68

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQL---------------------- 275
           N +S LP ++G+L++L  L+L+ N + +    ++ C+                       
Sbjct: 69  NEVSVLPPDIGQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPESICECS 128

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLP 334
            +++L L++ +L+ LP  IG +  LR L    N L+T+  S+V       LK L    L 
Sbjct: 129 SITILSLNDTTLTSLPANIGSLVNLRVLEARENHLKTIPLSIVE------LKQLEELDLG 182

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
           +NE        EDL     +L+ + +E   +  NL  +P  I +   + +LD+S N I  
Sbjct: 183 QNE-------IEDLPAKIGKLT-SLREFYADMNNLGTLPDSISDCRMLDQLDVSENQINR 234

Query: 395 LPPELSSCASL 405
           LP  L S +SL
Sbjct: 235 LPENLGSMSSL 245


>gi|324504718|gb|ADY42033.1| Leucine-rich repeat protein soc-2 [Ascaris suum]
          Length = 587

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/371 (29%), Positives = 185/371 (49%), Gaps = 19/371 (5%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++   L+ L L +N I  +  ++  L  L ++++  NK+ ELPA IG++  L    +S+N
Sbjct: 191 YQISSLETLWLRYNRIVSVGAEIGRLKRLKMIDLRENKIRELPATIGQISSLLVCLLSYN 250

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  IPDEIG  T L + D   N L  LPS++G   NL       N +  LP  +++C K
Sbjct: 251 HLRTIPDEIGQCTELTQLDLQHNDLVSLPSTMGNLSNLIRLGIRYNKLRYLPPGMSNCHK 310

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRIL 220
           + +  VE N+L  L + ++ S   L  +  S+N L   P       +  + +++  N I 
Sbjct: 311 LEEFIVESNQLEALPDGMLTSLPNLKTINLSRNELTNFPAGGPQQFASAVTINMEHNSIS 370

Query: 221 SIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
            IP  I +    L +  +  N L+++P ++G  + +  L+L +NQL+    +  +L  L 
Sbjct: 371 KIPFGIFAKATGLTKLNLKENGLTSMPLDMGAWTAMTELNLSTNQLRVLPDDIDKLINLE 430

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLPENE 337
           VL LSNN L  LP +IG +  LR+L L  N L ++ S +  G    L K +++S    N+
Sbjct: 431 VLVLSNNQLKKLPSQIGALKKLRELDLEENELDSVPSEI--GFVTTLTKLWIQS----NK 484

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN-SIQELP 396
                 T  +L  +         +L     NL+++P EI     +  L ++ N S+  LP
Sbjct: 485 LVSLPRTIGNLTNLT--------DLRAGENNLTSLPEEIGNLDSLKSLYINDNSSLHNLP 536

Query: 397 PELSSCASLQV 407
            EL+ CASL++
Sbjct: 537 FELALCASLEI 547



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 153/347 (44%), Gaps = 42/347 (12%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           LS   LR +P+E+              +  +L +L L HN++  L   + NL  L  L +
Sbjct: 247 LSYNHLRTIPDEI-------------GQCTELTQLDLQHNDLVSLPSTMGNLSNLIRLGI 293

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE-IGSATALVKFDCSSNQLKELPSS-- 132
            +NKL  LP  +   H L+   V  N +  +PD  + S   L   + S N+L   P+   
Sbjct: 294 RYNKLRYLPPGMSNCHKLEEFIVESNQLEALPDGMLTSLPNLKTINLSRNELTNFPAGGP 353

Query: 133 -----------------------LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                                    +   L+      N +TS+P D+   + M++L++  
Sbjct: 354 QQFASAVTINMEHNSISKIPFGIFAKATGLTKLNLKENGLTSMPLDMGAWTAMTELNLST 413

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+L VL ++ I     L  L+ S N L  +P  IG+L +L  LDL +N + S+PS I   
Sbjct: 414 NQLRVLPDD-IDKLINLEVLVLSNNQLKKLPSQIGALKKLRELDLEENELDSVPSEIGFV 472

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNS-L 287
            +L + ++ +N L +LP  +G L+ L  L    N L     E   L  L  L +++NS L
Sbjct: 473 TTLTKLWIQSNKLVSLPRTIGNLTNLTDLRAGENNLTSLPEEIGNLDSLKSLYINDNSSL 532

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             LP E+    +L  + +   PL  +   +  G    +++YL+ + P
Sbjct: 533 HNLPFELALCASLEIMSIENCPLSQIPPEITAGGPSLVIQYLKMQGP 579



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 59/262 (22%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           S++ I S+P  + D  ++++L +  NKLT L +  I +   LT+L  S+N L  +P+++ 
Sbjct: 110 SSSDIVSIPTSIRDLVQLTELFLYKNKLTALPHE-IGNLVNLTKLGLSENGLTSLPDSLS 168

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           +L++L  LDL  N++  IP  I    SL   ++  N + ++ AE+G+L +L  +DL  N+
Sbjct: 169 ALTQLETLDLRHNKLCEIPPVIYQISSLETLWLRYNRIVSVGAEIGRLKRLKMIDLRENK 228

Query: 265 LKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
           ++E                      LP  IG++++L   LL+ N LRT+           
Sbjct: 229 IRE----------------------LPATIGQISSLLVCLLSYNHLRTI----------- 255

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
                                 D I   T L+    +L L+  +L ++PS +     + +
Sbjct: 256 ---------------------PDEIGQCTELT----QLDLQHNDLVSLPSTMGNLSNLIR 290

Query: 385 LDLSRNSIQELPPELSSCASLQ 406
           L +  N ++ LPP +S+C  L+
Sbjct: 291 LGIRYNKLRYLPPGMSNCHKLE 312


>gi|410294462|gb|JAA25831.1| leucine rich repeat containing 1 [Pan troglodytes]
          Length = 524

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 191/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N++ E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 136 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 195 ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL KL                      S+L +  N L+ LP  +G   +L 
Sbjct: 255 LETIPDGIGKLKKL----------------------SILKVDQNRLTQLPEAVGDCESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 293 ELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGGCSLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 340 FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTA 379



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLP-EAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I G CSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGGCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 155/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N++ E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQVADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L T+  
Sbjct: 223 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 261 GIGKLKKLSILKVDQNRL--TQLPEAVGDCESLT-----------ELVLTENQLLTLPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+    SL V
Sbjct: 308 IGKLKKLSNLNADRNKLVSLPKEIGGGCSLTV 339



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|357614953|gb|EHJ69388.1| hypothetical protein KGM_05974 [Danaus plexippus]
          Length = 710

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 133/246 (54%), Gaps = 1/246 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           + LQ L L  N ++ L E L+NL  L  L++  N++ ELP  IGEL  L+ L +  N + 
Sbjct: 73  ISLQSLELRENLLKSLPESLKNLTKLERLDLGDNEIEELPGFIGELPALQELWLDHNKLQ 132

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG+  AL+  D S N+L+ +P  +G   +L+D   S N + ++P  + D SK++ 
Sbjct: 133 NLPSEIGNLKALICLDVSENKLERIPEDIGGLSSLTDLHLSQNMLETVPNGIGDLSKLAI 192

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L ++ N+L  L+ N +   T L ELI ++N L  +P++IG+L+ L  L++ +N +  IP 
Sbjct: 193 LKLDQNRLHTLNEN-VGRCTSLQELILTENFLTELPKSIGNLNELTVLNVDRNSLGDIPL 251

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I     L    + +N L+ LP ELG    L  LD+  N+L+        L L  + LS 
Sbjct: 252 EIGNMTLLGVLSLRDNKLTKLPNELGNCKSLHVLDVSGNRLQYLPYTLVNLELKAVWLSE 311

Query: 285 NSLSGL 290
           N    L
Sbjct: 312 NQAQPL 317



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 148/274 (54%), Gaps = 2/274 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N I +L      L  LTVL ++   L+ LP+  G L  L+SL++  N +  +
Sbjct: 29  LQIADFSSNPIPRLPAGFSQLRALTVLGLNDMSLTSLPSDFGSLISLQSLELRENLLKSL 88

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ + + T L + D   N+++ELP  +G    L +    +N + +LP ++ +   +  LD
Sbjct: 89  PESLKNLTKLERLDLGDNEIEELPGFIGELPALQELWLDHNKLQNLPSEIGNLKALICLD 148

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  NKL  +  + I   + LT+L  S+N+L  +P  IG LS+L  L L QNR+ ++  ++
Sbjct: 149 VSENKLERIPED-IGGLSSLTDLHLSQNMLETVPNGIGDLSKLAILKLDQNRLHTLNENV 207

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
             C SL E  +  N L+ LP  +G L++L  L++  N L +  +E   +  L VL L +N
Sbjct: 208 GRCTSLQELILTENFLTELPKSIGNLNELTVLNVDRNSLGDIPLEIGNMTLLGVLSLRDN 267

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+ LP E+G   +L  L ++GN L+ L  +LVN
Sbjct: 268 KLTKLPNELGNCKSLHVLDVSGNRLQYLPYTLVN 301



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 145/325 (44%), Gaps = 36/325 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +  +S   + ++P  I +L  L+  D S N I ++P       AL     +   L  LPS
Sbjct: 8   IFKLSGFYIPDIPEDIKKLRALQIADFSSNPIPRLPAGFSQLRALTVLGLNDMSLTSLPS 67

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
             G  ++L   +   N + SLPE L + +K+ +LD+  N++  L    I     L EL  
Sbjct: 68  DFGSLISLQSLELRENLLKSLPESLKNLTKLERLDLGDNEIEELPG-FIGELPALQELWL 126

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P  IG+L  LI LD+ +N++  IP  I G  SL + ++  N L  +P  +G 
Sbjct: 127 DHNKLQNLPSEIGNLKALICLDVSENKLERIPEDIGGLSSLTDLHLSQNMLETVPNGIGD 186

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           LSKL                      ++L L  N L  L   +G+ T+L++L+LT N L 
Sbjct: 187 LSKL----------------------AILKLDQNRLHTLNENVGRCTSLQELILTENFLT 224

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L  S+ N     +L   R+ L            E  I   T L V    LSL    L+ 
Sbjct: 225 ELPKSIGNLNELTVLNVDRNSL-------GDIPLE--IGNMTLLGV----LSLRDNKLTK 271

Query: 372 IPSEIWEAGEITKLDLSRNSIQELP 396
           +P+E+     +  LD+S N +Q LP
Sbjct: 272 LPNELGNCKSLHVLDVSGNRLQYLP 296



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 141/315 (44%), Gaps = 56/315 (17%)

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           I  IP++I    AL   D SSN +  LP+   +   L+    ++  +TSLP D      +
Sbjct: 16  IPDIPEDIKKLRALQIADFSSNPIPRLPAGFSQLRALTVLGLNDMSLTSLPSDFGSLISL 75

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             L++                         +NLL  +PE++ +L++L RLDL  N I  +
Sbjct: 76  QSLELR------------------------ENLLKSLPESLKNLTKLERLDLGDNEIEEL 111

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL 282
           P  I    +L E ++ +N L  LP+E+G L  L             C          LD+
Sbjct: 112 PGFIGELPALQELWLDHNKLQNLPSEIGNLKAL------------IC----------LDV 149

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NEDSEA 341
           S N L  +P +IG +++L  L L+ N L T+ + + +    A+LK  ++RL   NE+   
Sbjct: 150 SENKLERIPEDIGGLSSLTDLHLSQNMLETVPNGIGDLSKLAILKLDQNRLHTLNENVGR 209

Query: 342 STTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
            T+ ++LI     L+   K          L+++  +L  IP EI     +  L L  N +
Sbjct: 210 CTSLQELILTENFLTELPKSIGNLNELTVLNVDRNSLGDIPLEIGNMTLLGVLSLRDNKL 269

Query: 393 QELPPELSSCASLQV 407
            +LP EL +C SL V
Sbjct: 270 TKLPNELGNCKSLHV 284



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/181 (30%), Positives = 87/181 (48%), Gaps = 19/181 (10%)

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           IS    L+ FY+ +     +P ++ KL  L   D  SN +        QLR L+VL L++
Sbjct: 5   ISEIFKLSGFYIPD-----IPEDIKKLRALQIADFSSNPIPRLPAGFSQLRALTVLGLND 59

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
            SL+ LP + G + +L+ L L  N L++L  SL N     L K  R  L +NE  E    
Sbjct: 60  MSLTSLPSDFGSLISLQSLELRENLLKSLPESLKN-----LTKLERLDLGDNEIEELPGF 114

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
             +L  +        +EL L+   L  +PSEI     +  LD+S N ++ +P ++   +S
Sbjct: 115 IGELPAL--------QELWLDHNKLQNLPSEIGNLKALICLDVSENKLERIPEDIGGLSS 166

Query: 405 L 405
           L
Sbjct: 167 L 167


>gi|45361617|ref|NP_989386.1| leucine rich repeat containing 1 [Xenopus (Silurana) tropicalis]
 gi|40675662|gb|AAH64859.1| hypothetical protein MGC75617 [Xenopus (Silurana) tropicalis]
          Length = 524

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 188/409 (45%), Gaps = 51/409 (12%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILAH 54
           +  R   S++  + SL  VP E+Y+      E             ++++ V L+KL L+ 
Sbjct: 9   RCNRHVESVDKRHCSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVKLRKLGLSD 68

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I++L  ++ N   L  L+VS N++ E+P +I     L+  D S N + ++PD      
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPDSFPDLA 128

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L     +   L+ LP ++G   NL   +   N +T LPE LA   ++ +LD+  N+L  
Sbjct: 129 SLTCLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDIGNNELYN 188

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I S   L +L    N L  +P  IG L  L+ LDL +N++  +P  ISG  SL +
Sbjct: 189 LPET-IGSLYKLKDLWLDGNQLADLPPEIGHLKNLLCLDLSENKLERLPEEISGLKSLTD 247

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPP 292
             + +N++  LP  +GKL  L  L +  N+L +   C+  C+  L+ L L+ N L  LP 
Sbjct: 248 LLVSHNSIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECE-SLTELILTENQLLVLPR 306

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            IGK+  L  L +  N L +L                               KE  I   
Sbjct: 307 SIGKLKKLCNLNIDRNKLMSL------------------------------PKE--IGGC 334

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             L+V      +    LS IPSEI +A E+  LD++ N +  LP  L+S
Sbjct: 335 CGLNV----FCVRENRLSRIPSEIAKATELHVLDVAGNRLTHLPLSLTS 379



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 132/241 (54%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L++ +N+L  LP  IG L+ LK L +  N +  
Sbjct: 152 NLVSLELRENLLTFLPESLAQLHRLEELDIGNNELYNLPETIGSLYKLKDLWLDGNQLAD 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L+  D S N+L+ LP  +    +L+D   S+N I  LP+ +     +S L
Sbjct: 212 LPPEIGHLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSIEVLPDGIGKLKNLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+L  L++  I     LTELI ++N L  +P +IG L +L  L++ +N+++S+P  
Sbjct: 272 KVDQNRLMQLTD-CIGECESLTELILTENQLLVLPRSIGKLKKLCNLNIDRNKLMSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCC L  F +  N LS +P+E+ K ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCGLNVFCVRENRLSRIPSEIAKATELHVLDVAGNRLTHLPLSLTSLKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 157/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N++ E+P S+  C 
Sbjct: 46  NQLRELPKQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LP+   D + ++ L +    L VL                    
Sbjct: 106 ALQVADF--SGNPLTRLPDSFPDLASLTCLSINDISLQVL-------------------- 143

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
               PE IG+LS L+ L+L +N +  +P S++    L E  +GNN L  LP  +G L KL
Sbjct: 144 ----PENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDIGNNELYNLPETIGSLYKL 199

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L  NQL +   E   L+ L  LDLS N L  LP EI  + +L  LL++ N +  L 
Sbjct: 200 KDLWLDGNQLADLPPEIGHLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSIEVLP 259

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +      ++LK  ++RL +  D                 S+T  EL L    L  +P 
Sbjct: 260 DGIGKLKNLSILKVDQNRLMQLTDCIGECE-----------SLT--ELILTENQLLVLPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            I +  ++  L++ RN +  LP E+  C  L V
Sbjct: 307 SIGKLKKLCNLNIDRNKLMSLPKEIGGCCGLNV 339



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 123/314 (39%), Gaps = 83/314 (26%)

Query: 93  LKSLDVSFNSIMKIPDEIGSAT-ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++S+D    S++ +P+EI   + +L +    +NQL+ELP    + + L     S+N I  
Sbjct: 14  VESVDKRHCSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVKLRKLGLSDNEIQR 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP +                        IA++  L EL  S+N +  +PE+I     L  
Sbjct: 74  LPPE------------------------IANFMQLVELDVSRNEIPEIPESISFCKALQV 109

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D   N +  +P S     SL    + + +L  LP  +G LS L +L+L  N L      
Sbjct: 110 ADFSGNPLTRLPDSFPDLASLTCLSINDISLQVLPENIGNLSNLVSLELRENLL------ 163

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                           + LP  + ++  L +L +  N L  L                  
Sbjct: 164 ----------------TFLPESLAQLHRLEELDIGNNELYNL------------------ 189

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
             PE              T+ +   +  K+L L+G  L+ +P EI     +  LDLS N 
Sbjct: 190 --PE--------------TIGSLYKL--KDLWLDGNQLADLPPEIGHLKNLLCLDLSENK 231

Query: 392 IQELPPELSSCASL 405
           ++ LP E+S   SL
Sbjct: 232 LERLPEEISGLKSL 245


>gi|114607924|ref|XP_001156152.1| PREDICTED: leucine-rich repeat-containing protein 1 isoform 1 [Pan
           troglodytes]
 gi|297678399|ref|XP_002817063.1| PREDICTED: leucine-rich repeat-containing protein 1 [Pongo abelii]
 gi|397517578|ref|XP_003828986.1| PREDICTED: leucine-rich repeat-containing protein 1 [Pan paniscus]
 gi|426353583|ref|XP_004044270.1| PREDICTED: leucine-rich repeat-containing protein 1 [Gorilla
           gorilla gorilla]
 gi|410213308|gb|JAA03873.1| leucine rich repeat containing 1 [Pan troglodytes]
 gi|410257926|gb|JAA16930.1| leucine rich repeat containing 1 [Pan troglodytes]
 gi|410336559|gb|JAA37226.1| leucine rich repeat containing 1 [Pan troglodytes]
          Length = 524

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 191/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N++ E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 136 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 195 ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL KL                      S+L +  N L+ LP  +G   +L 
Sbjct: 255 LETIPDGIGKLKKL----------------------SILKVDQNRLTQLPEAVGDCESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 293 ELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 340 FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTA 379



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPEA-VGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 156/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N++ E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQVADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L T+  
Sbjct: 223 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 261 GIGKLKKLSILKVDQNRL--TQLPEAVGDCESLT-----------ELVLTENQLLTLPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 308 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|418755319|ref|ZP_13311526.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964330|gb|EKO32220.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 492

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 156/307 (50%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS+  L  +P E+ K               +LQKL L  N +  L E++  L  L  L
Sbjct: 140 LDLSSNQLMTLPKEIGK-------------LQNLQKLNLTRNRLANLPEEIGKLQNLQEL 186

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +++ N+L+ LP  I +L  L+ L ++ N +  +P EIG    L      +NQL  LP  +
Sbjct: 187 HLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEI 246

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     SNN +T+LP+++     + +L +E N+LT L    I     L EL    
Sbjct: 247 GKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKE-IGKLQNLQELRLDY 305

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +PE I  L +L +L    N+  ++P  I    +L    + +N L++LP E+G L 
Sbjct: 306 NRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQ 365

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  +L+ L +L LS+N L+ LP EIGK+  L++L L+ N L T
Sbjct: 366 NLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLSDNQLAT 425

Query: 313 LRSSLVN 319
           L   + N
Sbjct: 426 LPKEIEN 432



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/310 (32%), Positives = 155/310 (50%), Gaps = 16/310 (5%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            LNL+   L ++P E+ K  N  E    D     +        +LQ L L +N +  L +
Sbjct: 162 KLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPK 221

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L++ +N+L+ LP  IG+L  L+ L +S N +  +P EIG    L +    
Sbjct: 222 EIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLE 281

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQL  LP  +G+  NL + +   N +T+LPE++    K+ KL   GN+ T +   +   
Sbjct: 282 NNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEI--- 338

Query: 183 WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           W +  L  L    N L  +P+ IG+L  L  L L  N++ ++P  I    +L   Y+ +N
Sbjct: 339 WNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDN 398

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L+ LP E+GKL  L  L L  NQL     E   L+ L  L LS+N L+  P EIGK+  
Sbjct: 399 QLTTLPKEIGKLQNLQELYLSDNQLATLPKEIENLQSLEYLYLSDNPLTSFPEEIGKLQH 458

Query: 300 LRKLLLTGNP 309
           L+ L L   P
Sbjct: 459 LKWLRLENIP 468



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 178/387 (45%), Gaps = 27/387 (6%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL-------LTVLNVSHNKL 80
           VY N  EA +        D+Q L L     +   + L  LP        L  L++S N+L
Sbjct: 93  VYYNLTEALQ-----HPTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQL 147

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
             LP  IG+L  L+ L+++ N +  +P+EIG    L +   + NQL  LP  + +  NL 
Sbjct: 148 MTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQ 207

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               +NN +T+LP+++    K+  L +E N+LT L    I     L  L  S N L  +P
Sbjct: 208 WLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKE-IGKLQNLQWLGLSNNQLTTLP 266

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L  L  L L  N++ ++P  I    +L E  +  N L+ LP E+ KL KL  L  
Sbjct: 267 KEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYS 326

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             NQ      E   L+ L  L+L +N L+ LP EIG +  L+ L L+ N L TL   +  
Sbjct: 327 SGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGK 386

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                LL YL        D++ +T  +++  +        +EL L    L+ +P EI   
Sbjct: 387 LQNLQLL-YL-------SDNQLTTLPKEIGKLQNL-----QELYLSDNQLATLPKEIENL 433

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQ 406
             +  L LS N +   P E+     L+
Sbjct: 434 QSLEYLYLSDNPLTSFPEEIGKLQHLK 460



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 138/305 (45%), Gaps = 38/305 (12%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   D SSNQL  LP  +G+  NL     + N + +LPE++     + +L
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQEL 186

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L    I     L  L  + N L  +P+ IG L +L  L L  N++ ++P  
Sbjct: 187 HLTDNQLTTLPKE-IEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKE 245

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + NN L+ LP E+GKL  L  L L +NQL     E  +L+ L  L L  
Sbjct: 246 IGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDY 305

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EI K+  L+KL  +GN   T+   + N      L+ L++             
Sbjct: 306 NRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWN------LQNLQA------------- 346

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                            L+L    L+++P EI     +  L LS N +  LP E+    +
Sbjct: 347 -----------------LNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQN 389

Query: 405 LQVKF 409
           LQ+ +
Sbjct: 390 LQLLY 394


>gi|258545585|ref|ZP_05705819.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
 gi|258519285|gb|EEV88144.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
          Length = 430

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 185/387 (47%), Gaps = 61/387 (15%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG-------------- 88
           E + L +L L+   ++ L E L  L LLT L++  N+L  LPA+IG              
Sbjct: 50  ELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNELKSLPASIGDLSLLRRLDLKWNQ 109

Query: 89  ---------ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
                    +L  L  L++ +N +  +P+ + +   + + D S N+L  +P  LG    L
Sbjct: 110 LETLPDSFAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLFLGNFTRL 169

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
           +    + N + +LP   A+ +++++L++ GN+L  L  + IA+++ L+EL  S N L  +
Sbjct: 170 TKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQLP-DFIANFSQLSELEISGNQLGSL 228

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           PE IG L  L  LD+  N + ++P ++    +L+   + NN L++LPA  G L +L  L 
Sbjct: 229 PEYIGRLKELHHLDISGNMLTTLPETLGDLQNLSILDIHNNRLTSLPANFGNLGQLHRLS 288

Query: 260 LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           L  NQL      A Q+ RL+VLDLS+N L  LP  I + + L  L L  N L        
Sbjct: 289 LAHNQLSLLPPPAAQMQRLAVLDLSHNRLMQLPNFICQFSHLNDLHLGYNEL-------- 340

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                       + LP++            I + T L V    L++   N+ A+P  +  
Sbjct: 341 ------------TELPDD------------IGLLTELEV----LNIAHNNIGALPPSVAN 372

Query: 379 AGEITKLDLSRNSIQELPPELSSCASL 405
             ++T+LDLS   I  LP  +S+   L
Sbjct: 373 LTKMTRLDLSSTQIPYLPKFISNLNRL 399



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 134/282 (47%), Gaps = 25/282 (8%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + +   L KL L +N +  L E L     +T L++S N+L  +P  +G    L  L++
Sbjct: 115 DSFAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLFLGNFTRLTKLNL 174

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           + N +  +P    + T L + + S N+LK+LP  +     LS+ + S N + SLPE +  
Sbjct: 175 ARNKLENLPPVCANLTQLTRLNLSGNELKQLPDFIANFSQLSELEISGNQLGSLPEYIGR 234

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             ++  LD+ GN LT L                        PET+G L  L  LD+H NR
Sbjct: 235 LKELHHLDISGNMLTTL------------------------PETLGDLQNLSILDIHNNR 270

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           + S+P++      L    + +N LS LP    ++ +L  LDL  N+L +     CQ   L
Sbjct: 271 LTSLPANFGNLGQLHRLSLAHNQLSLLPPPAAQMQRLAVLDLSHNRLMQLPNFICQFSHL 330

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           + L L  N L+ LP +IG +T L  L +  N +  L  S+ N
Sbjct: 331 NDLHLGYNELTELPDDIGLLTELEVLNIAHNNIGALPPSVAN 372



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 150/318 (47%), Gaps = 28/318 (8%)

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           +IP E      L + D S  +L+ LP +LG    L++     N + SLP  + D S + +
Sbjct: 43  RIPREPSELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNELKSLPASIGDLSLLRR 102

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L  L ++  A  T LT+L    N +  +PE + + + +  LDL  NR+L +P 
Sbjct: 103 LDLKWNQLETLPDS-FAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPL 161

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLD 281
            +     L +  +  N L  LP     L++L  L+L  N+LK+   +     Q  LS L+
Sbjct: 162 FLGNFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQLPDFIANFSQ--LSELE 219

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENED 338
           +S N L  LP  IG++  L  L ++GN L TL  +L +    ++L    +R   LP N  
Sbjct: 220 ISGNQLGSLPEYIGRLKELHHLDISGNMLTTLPETLGDLQNLSILDIHNNRLTSLPANFG 279

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP- 397
           +         +    RLS+   +LSL       +P    +   +  LDLS N + +LP  
Sbjct: 280 N---------LGQLHRLSLAHNQLSL-------LPPPAAQMQRLAVLDLSHNRLMQLPNF 323

Query: 398 --ELSSCASLQVKFSDLV 413
             + S    L + +++L 
Sbjct: 324 ICQFSHLNDLHLGYNELT 341


>gi|157128242|ref|XP_001661361.1| LAP4 protein (Scribble protein) (Smell-impaired protein) [Aedes
           aegypti]
 gi|108882248|gb|EAT46473.1| AAEL002336-PA, partial [Aedes aegypti]
          Length = 626

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 141/255 (55%), Gaps = 4/255 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N ++ L E +  L  L  L++  N++ ELP  +G L  L+ L +  N + K+
Sbjct: 101 LESLELRENLLKHLPESISQLTNLERLDLGDNEIEELPPHLGYLPALQELWLDHNQLQKL 160

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    LV  D S N+++ELP  +G   NL+D   S N +  LP+ ++  +K++ L 
Sbjct: 161 PPEIGLLKNLVCLDVSENRMEELPEEIGGLENLTDLHLSQNLLEVLPDGISKLTKLTILK 220

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L+ N I     + ELI ++N LN +P TIG+++ L  L++ +N ++S+PS +
Sbjct: 221 LDQNRLHTLNEN-IGQCVNMQELILTENFLNELPYTIGNMTMLNNLNVDRNSLISVPSEL 279

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
             C +L    +  N L+ LP+ELG   +L  LD+  N+L+        L+L  + LS N 
Sbjct: 280 GNCKNLGVLSLRENKLTKLPSELGNCLELHVLDVSGNRLQHLPYSLVNLQLKAVWLSENQ 339

Query: 287 LSGL---PPEIGKMT 298
              L    P+I ++T
Sbjct: 340 AQPLLTFQPDIDEVT 354



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 164/350 (46%), Gaps = 38/350 (10%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L +S N++ +LP+ I     L  LDVS N I  IPD+I    +L   D SSN +  L
Sbjct: 9   LRKLGLSDNEIIKLPSDIQNFENLVELDVSRNDIGDIPDDIKHLRSLQILDFSSNPIHRL 68

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+   +  NL+    ++  +TSLP+D    SK+  L++                      
Sbjct: 69  PAGFSQLRNLTILGLNDMSLTSLPQDFGCLSKLESLELR--------------------- 107

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
              +NLL  +PE+I  L+ L RLDL  N I  +P  +    +L E ++ +N L  LP E+
Sbjct: 108 ---ENLLKHLPESISQLTNLERLDLGDNEIEELPPHLGYLPALQELWLDHNQLQKLPPEI 164

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G L  L  LD+  N+++E   E   L  L+ L LS N L  LP  I K+T L  L L  N
Sbjct: 165 GLLKNLVCLDVSENRMEELPEEIGGLENLTDLHLSQNLLEVLPDGISKLTKLTILKLDQN 224

Query: 309 PLRTLRSSL---VNGPTPALLKYLRSRLPENEDSEA-----STTKEDLITMATRLSVTSK 360
            L TL  ++   VN     L +   + LP    +       +  +  LI++ + L     
Sbjct: 225 RLHTLNENIGQCVNMQELILTENFLNELPYTIGNMTMLNNLNVDRNSLISVPSELGNCKN 284

Query: 361 --ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
              LSL    L+ +PSE+    E+  LD+S N +Q LP    S  +LQ+K
Sbjct: 285 LGVLSLRENKLTKLPSELGNCLELHVLDVSGNRLQHLP---YSLVNLQLK 331



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 158/330 (47%), Gaps = 38/330 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LS+  +  +P+++ +NF+            +L +L ++ N+I  + +D+++L  L +L
Sbjct: 12  LGLSDNEIIKLPSDI-QNFE------------NLVELDVSRNDIGDIPDDIKHLRSLQIL 58

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           + S N +  LPA   +L  L  L ++  S+  +P + G  + L   +   N LK LP S+
Sbjct: 59  DFSSNPIHRLPAGFSQLRNLTILGLNDMSLTSLPQDFGCLSKLESLELRENLLKHLPESI 118

Query: 134 GRCLNLSDFKASNNCITSLPEDLA----------DCSKMSK-------------LDVEGN 170
            +  NL      +N I  LP  L           D +++ K             LDV  N
Sbjct: 119 SQLTNLERLDLGDNEIEELPPHLGYLPALQELWLDHNQLQKLPPEIGLLKNLVCLDVSEN 178

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           ++  L    I     LT+L  S+NLL  +P+ I  L++L  L L QNR+ ++  +I  C 
Sbjct: 179 RMEELPEE-IGGLENLTDLHLSQNLLEVLPDGISKLTKLTILKLDQNRLHTLNENIGQCV 237

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           ++ E  +  N L+ LP  +G ++ L  L++  N L     E    + L VL L  N L+ 
Sbjct: 238 NMQELILTENFLNELPYTIGNMTMLNNLNVDRNSLISVPSELGNCKNLGVLSLRENKLTK 297

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           LP E+G    L  L ++GN L+ L  SLVN
Sbjct: 298 LPSELGNCLELHVLDVSGNRLQHLPYSLVN 327


>gi|256396794|ref|YP_003118358.1| phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
 gi|256363020|gb|ACU76517.1| Phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
          Length = 1263

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 179/370 (48%), Gaps = 36/370 (9%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           +T LN+S N+L+ LP  +GE+  L+ L +  N   ++P ++     LV+   + N L  L
Sbjct: 49  VTFLNLSGNRLATLPETLGEVTGLRRLWLDSNGFGELPPQVALLGGLVELSLTGNGLTTL 108

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL---------- 179
           P    R   L+      N  T+LPE +   S +++L ++ N+L  L ++L          
Sbjct: 109 PEEFARLERLTSLWLDENAFTALPEVVGHLSSLTQLYLQKNQLPGLPDSLGAPSLHTLVL 168

Query: 180 -----------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
                      I     L  L A  N+L  +P +IG+L RL  L L  NR+  +P+SI  
Sbjct: 169 DGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSLTGNRLRKLPTSIGD 228

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             SL + Y+  N L  LPA +G LS+L TL L  N L+E       L RL+ L+L++N L
Sbjct: 229 MASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLTELNLADNWL 288

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR-----LPENEDSEA- 341
           + +P  IG++ +L KL LT N L  L  SL  G    L     SR     LP++ D  A 
Sbjct: 289 THVPEAIGRLASLDKLSLTYNRLTELPPSL--GALRVLTALDVSRNSLHDLPDSFDGLAN 346

Query: 342 ----STTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
               +  +  L ++ + +    +   LSL   +L  +P+ +     +  LDL  N++++L
Sbjct: 347 LDTLNLAQNPLTSLPSSVGALKRLTWLSLAYCDLETLPAGLGGLHRLETLDLVGNNLRDL 406

Query: 396 PPELSSCASL 405
           P +LS   +L
Sbjct: 407 PFQLSGLGAL 416



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 184/379 (48%), Gaps = 38/379 (10%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           A  L  L+L  N++ +L + + +   L  L+   N L+ELP +IG L  L+ L ++ N +
Sbjct: 160 APSLHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSLTGNRL 219

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
            K+P  IG   +L K     NQL+ LP+S+G    L     S N +  LP  +AD S+++
Sbjct: 220 RKLPTSIGDMASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLT 279

Query: 164 KLDVEGN----------------KLTVLSNNL------IASWTMLTELIASKNLLNGMPE 201
           +L++  N                KL++  N L      + +  +LT L  S+N L+ +P+
Sbjct: 280 ELNLADNWLTHVPEAIGRLASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPD 339

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
           +   L+ L  L+L QN + S+PSS+     L    +    L  LPA LG L +L TLDL 
Sbjct: 340 SFDGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYCDLETLPAGLGGLHRLETLDLV 399

Query: 262 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N L++   +   L  L+ L+L++N LS +P  +G +  L  L L  N L +L  +L   
Sbjct: 400 GNNLRDLPFQLSGLGALTTLNLASNQLSWVPRTLGLLRNLVNLDLADNELSSLPRALGG- 458

Query: 321 PTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                L+ LR   + EN+ +    +  DL  + T        L L G  L+ +P+  W+ 
Sbjct: 459 -----LESLRKLDVAENQLTWIPRSVCDLPKLET--------LVLRGNRLADLPTSNWQK 505

Query: 380 GEITKLDLSRNSIQELPPE 398
             + +LDLS N +    PE
Sbjct: 506 LTLKELDLSDNPLLSAVPE 524



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 132/268 (49%), Gaps = 3/268 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N +  L + L   P L  L +  N L+ELP  IG+   L +L    N + ++
Sbjct: 141 LTQLYLQKNQLPGLPDSL-GAPSLHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTEL 199

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG+   L +   + N+L++LP+S+G   +L+      N + +LP  + + S++  L 
Sbjct: 200 PPSIGALIRLQELSLTGNRLRKLPTSIGDMASLTKLYLQKNQLQTLPASIGNLSELQTLA 259

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN L  L  + +A  + LTEL  + N L  +PE IG L+ L +L L  NR+  +P S+
Sbjct: 260 LSGNHLEELPAS-VADLSRLTELNLADNWLTHVPEAIGRLASLDKLSLTYNRLTELPPSL 318

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L    +  N+L  LP     L+ L TL+L  N L         L RL+ L L+  
Sbjct: 319 GALRVLTALDVSRNSLHDLPDSFDGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYC 378

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L  LP  +G +  L  L L GN LR L
Sbjct: 379 DLETLPAGLGGLHRLETLDLVGNNLRDL 406



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 15/152 (9%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L   +LRD+P      F  +G G        L  L LA N +  +   L  L  L  
Sbjct: 395 TLDLVGNNLRDLP------FQLSGLGA-------LTTLNLASNQLSWVPRTLGLLRNLVN 441

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+LS LP A+G L  L+ LDV+ N +  IP  +     L       N+L +LP+S
Sbjct: 442 LDLADNELSSLPRALGGLESLRKLDVAENQLTWIPRSVCDLPKLETLVLRGNRLADLPTS 501

Query: 133 LGRCLNLSDFKASNN-CITSLPEDLADCSKMS 163
             + L L +   S+N  ++++PE+  D   M+
Sbjct: 502 NWQKLTLKELDLSDNPLLSAVPENW-DVGTMA 532


>gi|355748651|gb|EHH53134.1| hypothetical protein EGM_13704 [Macaca fascicularis]
          Length = 524

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 192/404 (47%), Gaps = 47/404 (11%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILAHNNI 57
           R  G ++  + SL  VP E+Y+      E            +++++ V L+KL L+ N I
Sbjct: 12  RHVGGIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEI 71

Query: 58  EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV 117
           ++L  ++ N   L  L+VS N++ E+P +I     L+  D S N + ++P+       L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLT 131

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
               +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  
Sbjct: 132 CLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPE 191

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
           + I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +
Sbjct: 192 S-IGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVI 250

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKM 297
             N L  +P  +GKL KL                      S+L +  N L+ LP  +G  
Sbjct: 251 SQNLLETIPDGIGKLKKL----------------------SILKVDQNRLTQLPEAVGDC 288

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
            +L +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V
Sbjct: 289 ESLTELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV 339

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                 +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 340 ----FCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTA 379



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPEA-VGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 156/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N++ E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQVADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L T+  
Sbjct: 223 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 261 GIGKLKKLSILKVDQNRL--TQLPEAVGDCESLT-----------ELVLTENQLLTLPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 308 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|344274389|ref|XP_003408999.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Loxodonta africana]
          Length = 581

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 201/398 (50%), Gaps = 30/398 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L +L
Sbjct: 173 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLIML 219

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+   +   D   N+L +LP ++
Sbjct: 220 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCIQITNLDLQHNELLDLPDTI 279

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L   L++S   L  L  ++
Sbjct: 280 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPETLLSSLVKLNSLTLAR 339

Query: 194 NLLNGMPETIGS-LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAELGK 251
           N     P    S  S +  L++  NRI  IP  I S    L++  M +N L++LP + G 
Sbjct: 340 NCFQLYPMGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT 399

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N L
Sbjct: 400 WTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKL 459

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            +L + +      A LK L+  +  N      TT    I   T L+     L L    L+
Sbjct: 460 ESLPNEI------AYLKDLQKLVLTNNQ---LTTLPRGIGHLTNLT----HLGLGENLLT 506

Query: 371 AIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
            +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 507 HLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 544



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 359 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 418

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 419 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 477

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 478 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 537

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 538 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 575

Query: 309 PLRTL 313
           P R +
Sbjct: 576 PYRAM 580



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 102 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 161

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L    
Sbjct: 162 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLIMLS 220

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E    ++++ LDL +N L  LP  IG
Sbjct: 221 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCIQITNLDLQHNELLDLPDTIG 280

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            +++L +L L  N L  +  SL 
Sbjct: 281 NLSSLSRLGLRYNRLSAIPRSLA 303



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 373 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 419

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 420 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 479

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 480 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 539

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 540 SKLSIMSIENCPLSHLPPQIVA 561



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 14/197 (7%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G L  L TL L  N L    
Sbjct: 102 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 161

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L +L +LDL +N L  +P  + ++ +L  L L  N + T+   + N     L K 
Sbjct: 162 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKN-----LSKL 216

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           +   + EN+  +      +L  + T        L +    L  +P EI    +IT LDL 
Sbjct: 217 IMLSIRENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCIQITNLDLQ 268

Query: 389 RNSIQELPPELSSCASL 405
            N + +LP  + + +SL
Sbjct: 269 HNELLDLPDTIGNLSSL 285


>gi|428210576|ref|YP_007083720.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
 gi|427998957|gb|AFY79800.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
          Length = 298

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 142/281 (50%), Gaps = 20/281 (7%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           +T LN+S   L+ L + I +L  L  LD+  N +  +P EIG  + L + +   NQLK L
Sbjct: 18  VTSLNLSGKGLTTLASEIRQLTKLTRLDLYNNQLSALPSEIGQLSHLTRLNLGDNQLKVL 77

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LT 187
           P  + +  NL++     N +  LP ++   S +++LD++ N+L+ L + +   W +  L 
Sbjct: 78  PPEIWQLSNLTELDLWGNQLKVLPPEIWQLSNLTELDLQDNQLSALPSEI---WQLFNLK 134

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           E     N L+ +P  IG LS L +L L  N++  +P  I    +L + Y+ +N L+ LP 
Sbjct: 135 EFNLVGNQLSVLPPEIGQLSNLTKLYLQNNQLTVLPPEIGQLSNLTKLYLQDNQLTVLPP 194

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+LS L  L L +NQL     E   L  L  L+L  N LS LPPEIG +  L  ++L 
Sbjct: 195 EIGELSNLTELYLQNNQLSVLPPEIGNLTHLIELNLVGNELSALPPEIGHLRMLAAIILE 254

Query: 307 GNPLRTLRSSLVNG------PTPALLK--------YLRSRL 333
            NP       L  G      P P +LK        YLR +L
Sbjct: 255 ENPEEWWYDGLYLGGNPLTSPPPEILKQGIDATLAYLREQL 295



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 127/271 (46%), Gaps = 18/271 (6%)

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
           A   +++ L++ G  LT L++  I   T LT L    N L+ +P  IG LS L RL+L  
Sbjct: 13  AAEEQVTSLNLSGKGLTTLASE-IRQLTKLTRLDLYNNQLSALPSEIGQLSHLTRLNLGD 71

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 275
           N++  +P  I    +L E  +  N L  LP E+ +LS L  LDL  NQL     E  QL 
Sbjct: 72  NQLKVLPPEIWQLSNLTELDLWGNQLKVLPPEIWQLSNLTELDLQDNQLSALPSEIWQLF 131

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK-YLRSRLP 334
            L   +L  N LS LPPEIG+++ L KL L  N L  L   +  G    L K YL+    
Sbjct: 132 NLKEFNLVGNQLSVLPPEIGQLSNLTKLYLQNNQLTVLPPEI--GQLSNLTKLYLQ---- 185

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
              D++ +    ++  ++        EL L+   LS +P EI     + +L+L  N +  
Sbjct: 186 ---DNQLTVLPPEIGELSNL-----TELYLQNNQLSVLPPEIGNLTHLIELNLVGNELSA 237

Query: 395 LPPELSSCASLQVKFSDLVTNKESCISGCYL 425
           LPPE+     L     +    +E    G YL
Sbjct: 238 LPPEIGHLRMLAAIILE-ENPEEWWYDGLYL 267


>gi|261858318|dbj|BAI45681.1| leucine rich repeat containing 1 [synthetic construct]
          Length = 524

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 192/400 (48%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N++ E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + + 
Sbjct: 136 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-VG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 195 ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL KL                      S+L +  N L+ LP  +G+  +L 
Sbjct: 255 LETIPDGIGKLKKL----------------------SILKVDQNRLTQLPEAVGECESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 293 ELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 340 FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTA 379



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP ++G L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESVGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPEA-VGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 156/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N++ E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQVADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P S+     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESVGALLHLKDLWLDGNQLSELPQEIGNLKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L T+  
Sbjct: 223 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 261 GIGKLKKLSILKVDQNRL--TQLPEAVGECESLT-----------ELVLTENQLLTLPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 308 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESVGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|358336649|dbj|GAA32880.2| leucine-rich repeat protein soc-2 homolog [Clonorchis sinensis]
          Length = 586

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 181/396 (45%), Gaps = 67/396 (16%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA--AIGELHMLKSLDVS 99
           +  V+L  L++  N I  + +D+  L  L VL+V  NK+  LP+   I +L  L +LDVS
Sbjct: 192 YSLVNLTHLLMRFNRIRVVDDDISKLTKLQVLSVRENKIRSLPSNPGIEKLTQLMTLDVS 251

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N + ++P+EI     L   +   N+L+ LP S+G    L       N +  LP  +A C
Sbjct: 252 HNHLEQVPEEIQHCQKLTTLNLQHNELRSLPESIGELRLLERVGLRYNHLECLPASMAQC 311

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-------TIGSL------ 206
             + +L++EGN +  L   L+A    L+ L+ S+N     P        +I SL      
Sbjct: 312 DNLLELNIEGNNIVQLPEGLLAHLRKLSSLVVSRNYFRAFPPGGPQQFTSIQSLNMDHNQ 371

Query: 207 ------------SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
                       S L +L++  N++ S+P  I     L E  +G N L+ LP ++  L  
Sbjct: 372 ISKIPFGIFSRASHLAKLNMKDNQLASLPPDIKSWEVLVELNLGTNQLTKLPDDVEHLVN 431

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L L +NQLK       +L+ L +LDL  N L  LP EIG+++ L++L++  N L  L
Sbjct: 432 LEVLILSNNQLKRIPPTIQELKKLQLLDLEENHLECLPLEIGQLSELQRLIVQSNRLTEL 491

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN-LSAI 372
                    P  +  L+S                LI +A             G N L  +
Sbjct: 492 ---------PRTIGMLQS----------------LIHLAV------------GENDLQRL 514

Query: 373 PSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           P EI +  ++  L L+ N ++ +LP EL  C SLQ+
Sbjct: 515 PPEIGDLHKLETLYLNDNPNLNDLPTELGMCFSLQI 550



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 150/335 (44%), Gaps = 52/335 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L ++HN++E++ E++++   LT LN+ HN+L  LP +IGEL +L+ + + +N +  +
Sbjct: 245 LMTLDVSHNHLEQVPEEIQHCQKLTTLNLQHNELRSLPESIGELRLLERVGLRYNHLECL 304

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSL-GRCLNLSDFKASNNCITSLPED---------- 155
           P  +     L++ +   N + +LP  L      LS    S N   + P            
Sbjct: 305 PASMAQCDNLLELNIEGNNIVQLPEGLLAHLRKLSSLVVSRNYFRAFPPGGPQQFTSIQS 364

Query: 156 ---------------LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL----------- 189
                           +  S ++KL+++ N+L  L  + I SW +L EL           
Sbjct: 365 LNMDHNQISKIPFGIFSRASHLAKLNMKDNQLASLPPD-IKSWEVLVELNLGTNQLTKLP 423

Query: 190 ------------IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
                       I S N L  +P TI  L +L  LDL +N +  +P  I     L    +
Sbjct: 424 DDVEHLVNLEVLILSNNQLKRIPPTIQELKKLQLLDLEENHLECLPLEIGQLSELQRLIV 483

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN-SLSGLPPEIG 295
            +N L+ LP  +G L  L  L +  N L+    E   L +L  L L++N +L+ LP E+G
Sbjct: 484 QSNRLTELPRTIGMLQSLIHLAVGENDLQRLPPEIGDLHKLETLYLNDNPNLNDLPTELG 543

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
              +L+ + +   PL  +   +  G    +++YLR
Sbjct: 544 MCFSLQIMSIENCPLSQIPVEVTAGGPSLVIQYLR 578



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 156/348 (44%), Gaps = 20/348 (5%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           NKL  LP  IG L  L+ L +  NS+ ++PD +   T L   D   N+L E+P  +   +
Sbjct: 136 NKLVSLPPEIGLLPHLEILMLQENSLSRLPDSLAGCTNLRMLDIRHNKLCEIPPVIYSLV 195

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL-SNNLIASWTMLTELIASKNLL 196
           NL+      N I  + +D++  +K+  L V  NK+  L SN  I   T L  L  S N L
Sbjct: 196 NLTHLLMRFNRIRVVDDDISKLTKLQVLSVRENKIRSLPSNPGIEKLTQLMTLDVSHNHL 255

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +PE I    +L  L+L  N + S+P SI     L    +  N L  LPA + +   L 
Sbjct: 256 EQVPEEIQHCQKLTTLNLQHNELRSLPESIGELRLLERVGLRYNHLECLPASMAQCDNLL 315

Query: 257 TLDLHSN---QLKEYCVEACQLRLSVLDLSNNSLSGLPP-EIGKMTTLRKLLLTGNPLRT 312
            L++  N   QL E  +   + +LS L +S N     PP    + T+++ L +  N +  
Sbjct: 316 ELNIEGNNIVQLPEGLLAHLR-KLSSLVVSRNYFRAFPPGGPQQFTSIQSLNMDHNQISK 374

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +   + +    + L  L  +     D++ ++   D+ +    +     EL+L    L+ +
Sbjct: 375 IPFGIFS--RASHLAKLNMK-----DNQLASLPPDIKSWEVLV-----ELNLGTNQLTKL 422

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCI 420
           P ++     +  L LS N ++ +PP +     LQ    DL  N   C+
Sbjct: 423 PDDVEHLVNLEVLILSNNQLKRIPPTIQELKKLQ--LLDLEENHLECL 468



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 13/167 (7%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A     LN+ +  L  +P ++           K WE   L +L L  N + KL +D
Sbjct: 379 IFSRASHLAKLNMKDNQLASLPPDI-----------KSWEV--LVELNLGTNQLTKLPDD 425

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + +L  L VL +S+N+L  +P  I EL  L+ LD+  N +  +P EIG  + L +    S
Sbjct: 426 VEHLVNLEVLILSNNQLKRIPPTIQELKKLQLLDLEENHLECLPLEIGQLSELQRLIVQS 485

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           N+L ELP ++G   +L       N +  LP ++ D  K+  L +  N
Sbjct: 486 NRLTELPRTIGMLQSLIHLAVGENDLQRLPPEIGDLHKLETLYLNDN 532



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 46/282 (16%)

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           ++LD+   +L  L  ++      L EL    N L  +P  IG L  L  L L +N +  +
Sbjct: 105 TRLDLSKGQLHSLPPSIRDLAGHLRELYLYCNKLVSLPPEIGLLPHLEILMLQENSLSRL 164

Query: 223 PSSISGCCSLAEFYMGNNALSALPA-----------------------ELGKLSKLGTLD 259
           P S++GC +L    + +N L  +P                        ++ KL+KL  L 
Sbjct: 165 PDSLAGCTNLRMLDIRHNKLCEIPPVIYSLVNLTHLLMRFNRIRVVDDDISKLTKLQVLS 224

Query: 260 LHSNQLKEY----CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
           +  N+++       +E    +L  LD+S+N L  +P EI     L  L L  N LR+L  
Sbjct: 225 VRENKIRSLPSNPGIEKLT-QLMTLDVSHNHLEQVPEEIQHCQKLTTLNLQHNELRSLPE 283

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
           S+       LL+ +  R    E   AS  + D +           EL++EG N+  +P  
Sbjct: 284 SIGEL---RLLERVGLRYNHLECLPASMAQCDNLL----------ELNIEGNNIVQLPEG 330

Query: 376 IW-EAGEITKLDLSRNSIQELPP----ELSSCASLQVKFSDL 412
           +     +++ L +SRN  +  PP    + +S  SL +  + +
Sbjct: 331 LLAHLRKLSSLVVSRNYFRAFPPGGPQQFTSIQSLNMDHNQI 372


>gi|335292043|ref|XP_001927723.2| PREDICTED: leucine-rich repeat-containing protein 1 [Sus scrofa]
          Length = 524

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 190/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 136 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 195 ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  LP  +GKL KL                      S+L +  N L+ LP  IG   +L 
Sbjct: 255 LEMLPDGIGKLKKL----------------------SILKVDQNRLTQLPEAIGDCESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 293 ELVLTENRLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 340 FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTT 379



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    I     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPEA-IGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTTLKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 154/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQIADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L  L  
Sbjct: 223 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 261 GIGKLKKLSILKVDQNRL--TQLPEAIGDCESLT-----------ELVLTENRLLTLPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 308 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|421127514|ref|ZP_15587738.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410435604|gb|EKP84736.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 470

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 148/308 (48%), Gaps = 13/308 (4%)

Query: 17  SNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKEDLRN 66
           SNR L  +PNE+   KN      G      +        +LQ L L  N +  L  ++  
Sbjct: 102 SNR-LTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQ 160

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L  L VL++  N+L+ LP  I +L  L+ L +  N +  +P+EI     L   D  SNQL
Sbjct: 161 LKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQL 220

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
             LP  + +  NL      +N +T+L +D+     +  LD+  N+LT L N  I     L
Sbjct: 221 TVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE-IEQLKNL 279

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L   Y+ +N L  LP
Sbjct: 280 KSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLP 339

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+ +L  L +LDL  NQL     E  QL  L  LDL NN L  LP EI ++  L+ L L
Sbjct: 340 KEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFL 399

Query: 306 TGNPLRTL 313
           + N L TL
Sbjct: 400 SNNQLTTL 407



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 167/351 (47%), Gaps = 16/351 (4%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP+
Sbjct: 51  VLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPN 110

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT L N  I     L  L  
Sbjct: 111 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE-IEQLKNLQVLDL 169

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P+ I  L  L  L L  NR+ ++P+ I    +L    +G+N L+ LP E+ +
Sbjct: 170 GSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQ 229

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN-- 308
           L  L  L LHSN+L     +  QL+ L  LDLSNN L+ LP EI ++  L+ L L+ N  
Sbjct: 230 LKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQF 289

Query: 309 --------PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS- 359
                    L+ L+   +N     +L    ++L + +    S  +  LIT+   +     
Sbjct: 290 ATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ--LITLPKEIEQLKN 347

Query: 360 -KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            K L L    L+ +P E+ +   +  LDL  N ++ LP E+    +LQ  F
Sbjct: 348 LKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLF 398



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 181/402 (45%), Gaps = 46/402 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS + L+ +P E+              +  +LQ+L L +N +  L +++  L  L +L
Sbjct: 52  LDLSRQELKTLPIEI-------------GQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL 98

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L+ LP  I +L  L+ LD+  N +  +P EI     L      SN+L  LP+ +
Sbjct: 99  YLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEI 158

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +  NL      +N +T LP+++     +  L +  N+LT L N  I     L  L    
Sbjct: 159 EQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE-IEQLKNLQVLDLGS 217

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ I  L  L  L LH NR+ ++   I    +L    + NN L+ LP E+ +L 
Sbjct: 218 NQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 277

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L +L L  NQ   +  E  QL+ L VL L+NN ++ LP EI K+  L+ L L+ N L T
Sbjct: 278 NLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLIT 337

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---------LS 363
           L   +        LK L+S                L     +L++  KE         L 
Sbjct: 338 LPKEIEQ------LKNLKS----------------LDLSYNQLTILPKEVGQLENLQTLD 375

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           L    L  +P EI +   +  L LS N +  LP E+    +L
Sbjct: 376 LRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNL 417



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 131/284 (46%), Gaps = 36/284 (12%)

Query: 17  SNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKEDLRN 66
           SNR L  +PNE+   KN      G      +        +LQ L L  N +  L +D+  
Sbjct: 194 SNR-LTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQ 252

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L  L  L++S+N+L+ LP  I +L  LKSL +S N     P EIG    L     ++NQ+
Sbjct: 253 LQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQI 312

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
             LP+ + +   L     S+N + +LP+++     +  LD+  N+LT+L           
Sbjct: 313 TILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTIL----------- 361

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                        P+ +G L  L  LDL  N++ ++P  I    +L   ++ NN L+ LP
Sbjct: 362 -------------PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLP 408

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
            E+G+L  L  L L  NQL     E  QL+ L  L L+NN  S 
Sbjct: 409 QEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 452



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 127/284 (44%), Gaps = 15/284 (5%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           ++L  +L   L +     S   + +LP ++     + +L +  N+LTVL    I     L
Sbjct: 37  RDLTKALQNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQE-IEQLKNL 95

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L    N L  +P  I  L  L  LDL  N++  +P  I    +L   Y+ +N L+ LP
Sbjct: 96  QLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLP 155

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+ +L  L  LDL SNQL     E  QL+ L +L L +N L+ LP EI ++  L+ L L
Sbjct: 156 NEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDL 215

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N L  L   +       LL YL S       +  +T  +D+  +        K L L 
Sbjct: 216 GSNQLTVLPQEIEQLKNLQLL-YLHS-------NRLTTLSKDIEQLQ-----NLKSLDLS 262

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
              L+ +P+EI +   +  L LS N     P E+    +L+V F
Sbjct: 263 NNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLF 306



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 89/175 (50%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWW--------EAVDLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +        +  +L+ L L +N I  L  
Sbjct: 258 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 317

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  LKSLD+S+N +  +P E+G    L   D  
Sbjct: 318 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLR 377

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T+LP+++     +  L +  N+LT L N
Sbjct: 378 NNQLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPN 432


>gi|73670787|ref|YP_306802.1| hypothetical protein Mbar_A3344 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397949|gb|AAZ72222.1| hypothetical protein Mbar_A3344 [Methanosarcina barkeri str.
           Fusaro]
          Length = 892

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 141/273 (51%), Gaps = 26/273 (9%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT LN+S N+L+++P  IGEL  L  LD+S N++  +P EIG    L   D S NQL +L
Sbjct: 18  LTNLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQEIGELKNLKTLDLSGNQLIQL 77

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           PS +GR  NL+     +N +T LP ++ +   ++ L +  NKLT                
Sbjct: 78  PSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKLT---------------- 121

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                    +P  IG L  L  L ++ N++  +P  I    +L+   +  N L+ LP+E+
Sbjct: 122 --------QIPPEIGKLKNLETLYIYCNQLTQLPPEIGELKNLSILALNKNKLTQLPSEI 173

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G L  L TL L+ NQL E   E  +L  L  L + NN L+ LPPEI ++  L  L L+ N
Sbjct: 174 GNLKNLETLSLYRNQLIELPPEIGKLENLKTLYIDNNKLTILPPEISELKNLITLNLSAN 233

Query: 309 PLRTLRSSLVNGPTPALLKYL-RSRLPENEDSE 340
           PL +    +V+    A+  YL +S+  EN +++
Sbjct: 234 PLTSPPPEIVSRGLEAIFTYLNQSKTTENNEAK 266



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/220 (34%), Positives = 121/220 (55%), Gaps = 1/220 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L+ N + ++ +++  L  LT+L++S N L+ LP  IGEL  LK+LD+S N +++
Sbjct: 17  NLTNLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQEIGELKNLKTLDLSGNQLIQ 76

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +   NQL +LP  +    NL+     NN +T +P ++     +  L
Sbjct: 77  LPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKLTQIPPEIGKLKNLETL 136

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L    I     L+ L  +KN L  +P  IG+L  L  L L++N+++ +P  
Sbjct: 137 YIYCNQLTQLPPE-IGELKNLSILALNKNKLTQLPSEIGNLKNLETLSLYRNQLIELPPE 195

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           I    +L   Y+ NN L+ LP E+ +L  L TL+L +N L
Sbjct: 196 IGKLENLKTLYIDNNKLTILPPEISELKNLITLNLSANPL 235



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 38/271 (14%)

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           S+ +  NL++   S N +T +P+++ +   ++ LD+  N LT+L    I     L  L  
Sbjct: 11  SVAKEKNLTNLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQE-IGELKNLKTLDL 69

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  IG L  L  L+L+ N++  +P  I    +L    + NN L+ +P E+GK
Sbjct: 70  SGNQLIQLPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKLTQIPPEIGK 129

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL ++ NQL +   E  +L+ LS+L L+ N L+ LP EIG +  L  L L     
Sbjct: 130 LKNLETLYIYCNQLTQLPPEIGELKNLSILALNKNKLTQLPSEIGNLKNLETLSL----- 184

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
              R+ L+  P P + K                  E+L           K L ++   L+
Sbjct: 185 --YRNQLIELP-PEIGKL-----------------ENL-----------KTLYIDNNKLT 213

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
            +P EI E   +  L+LS N +   PPE+ S
Sbjct: 214 ILPPEISELKNLITLNLSANPLTSPPPEIVS 244



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 105/233 (45%), Gaps = 37/233 (15%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           +A    LT L  S N L  +P+ IG L  L  LDL +N +  +P  I    +L    +  
Sbjct: 12  VAKEKNLTNLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQEIGELKNLKTLDLSG 71

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP+E+G+L  L  L+L+ NQL +   E  +L+ L+ L L NN L+ +PPEIGK+ 
Sbjct: 72  NQLIQLPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKLTQIPPEIGKLK 131

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L  L +  N L  L                    PE             I     LS+ 
Sbjct: 132 NLETLYIYCNQLTQLP-------------------PE-------------IGELKNLSI- 158

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
              L+L    L+ +PSEI     +  L L RN + ELPPE+    +L+  + D
Sbjct: 159 ---LALNKNKLTQLPSEIGNLKNLETLSLYRNQLIELPPEIGKLENLKTLYID 208



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 13  SLNLSNRSLRDVPNEV--YKNF--------------DEAGEGDKWWEAVDLQKLILAHNN 56
           +LNLS   L  VP E+   KN                E GE        +L+ L L+ N 
Sbjct: 20  NLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQEIGE------LKNLKTLDLSGNQ 73

Query: 57  IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL 116
           + +L  ++  L  LT+LN+  N+L++LP  I EL  L +L +  N + +IP EIG    L
Sbjct: 74  LIQLPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKLTQIPPEIGKLKNL 133

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
                  NQL +LP  +G   NLS    + N +T LP ++ +   +  L +  N+L  L 
Sbjct: 134 ETLYIYCNQLTQLPPEIGELKNLSILALNKNKLTQLPSEIGNLKNLETLSLYRNQLIELP 193

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
              I     L  L    N L  +P  I  L  LI L+L  N + S P  I
Sbjct: 194 PE-IGKLENLKTLYIDNNKLTILPPEISELKNLITLNLSANPLTSPPPEI 242


>gi|398339753|ref|ZP_10524456.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 448

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 179/374 (47%), Gaps = 43/374 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L +N +  L  ++  L  L VL++  N+L+ LP  IG+L  L+ L++ FN +  
Sbjct: 72  NLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PDE+G    L   +   N+L  LP  +G+  NL     + N +T LPE +     +  L
Sbjct: 132 LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQIL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           + +GN+LT                          P+ IG L +L  L+L  NR+ ++   
Sbjct: 192 NSQGNQLTT------------------------FPKEIGQLQKLQELNLGFNRLTTLREE 227

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +    +L    + +N L+ LP E+G+L KL  L+L+  QLK       QL+ L  L+L+ 
Sbjct: 228 VVQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNY 287

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAST 343
             L+ LP EIG+++ L+KL L GN L TL   +        LK L+   L  N       
Sbjct: 288 THLTILPKEIGQLSKLQKLYLYGNQLTTLPEEI------GQLKKLQELYLGNNPLRTLPK 341

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
             E L  + T        L LEG  ++  P EI +   + +L+L  N +  LP E+    
Sbjct: 342 EIEQLQKLQT--------LYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQ 393

Query: 404 SLQ---VKFSDLVT 414
           +LQ   ++F+ L T
Sbjct: 394 NLQELNLEFNQLAT 407



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 123/252 (48%), Gaps = 2/252 (0%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E +  L  L +LN   N+L+  P  IG+L  L+ L++ FN +  + +E+     L   
Sbjct: 178 LPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQIL 237

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D  SN L  LP  +G+   L +       + +LP+ +     +  L++    LT+L    
Sbjct: 238 DLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKE- 296

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I   + L +L    N L  +PE IG L +L  L L  N + ++P  I     L   Y+  
Sbjct: 297 IGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEG 356

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N ++  P E+G+L  L  L+L  NQL     E  QL+ L  L+L  N L+ LP E+G++ 
Sbjct: 357 NQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQ 416

Query: 299 TLRKLLLTGNPL 310
            LRKL L  NP+
Sbjct: 417 KLRKLNLYNNPI 428



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 24/218 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L  LN+   +L  LP  I +L  L+ L++++  +  
Sbjct: 233 NLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTI 292

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG  + L K     NQL  LP  +G+   L +    NN + +LP+++    K+  L
Sbjct: 293 LPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTL 352

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +EGN++T                          P+ IG L  L  L+L  N++ ++P  
Sbjct: 353 YLEGNQITT------------------------FPKEIGQLQNLQELNLGFNQLTTLPQE 388

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           I    +L E  +  N L+ LP E+G+L KL  L+L++N
Sbjct: 389 IGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNN 426



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L L +N +  L +++  L  L  L +  N+++  P  IG+L  L+ L++ FN +  +
Sbjct: 326 LQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTL 385

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           P EIG    L + +   NQL  LP  +G+   L      NN I S
Sbjct: 386 PQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIAS 430


>gi|421129287|ref|ZP_15589488.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359483|gb|EKP06581.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 448

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 179/374 (47%), Gaps = 43/374 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L +N +  L  ++  L  L VL++  N+L+ LP  IG+L  L+ L++ FN +  
Sbjct: 72  NLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTI 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PDE+G    L   +   N+L  LP  +G+  NL     + N +T LPE +     +  L
Sbjct: 132 LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQIL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           + +GN+LT                          P+ IG L +L  L+L  NR+ ++   
Sbjct: 192 NSQGNQLTT------------------------FPKEIGQLQKLQELNLGFNRLTTLREE 227

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +    +L    + +N L+ LP E+G+L KL  L+L+  QLK       QL+ L  L+L+ 
Sbjct: 228 VVQLQNLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNY 287

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAST 343
             L+ LP EIG+++ L+KL L GN L TL   +        LK L+   L  N       
Sbjct: 288 THLTILPKEIGQLSKLQKLYLYGNQLTTLPEEI------GQLKKLQELYLGNNPLRTLPK 341

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
             E L  + T        L LEG  ++  P EI +   + +L+L  N +  LP E+    
Sbjct: 342 EIEQLQKLQT--------LYLEGNQITTFPKEIGQLKNLQELNLGFNQLTTLPQEIGQLQ 393

Query: 404 SLQ---VKFSDLVT 414
           +LQ   ++F+ L T
Sbjct: 394 NLQELNLEFNQLAT 407



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 24/218 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L  LN+   +L  LP  I +L  L+ L++++  +  
Sbjct: 233 NLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTI 292

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG  + L K     NQL  LP  +G+   L +    NN + +LP+++    K+  L
Sbjct: 293 LPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTL 352

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +EGN++T                          P+ IG L  L  L+L  N++ ++P  
Sbjct: 353 YLEGNQITT------------------------FPKEIGQLKNLQELNLGFNQLTTLPQE 388

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           I    +L E  +  N L+ LP E+G+L KL  L+L++N
Sbjct: 389 IGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNN 426



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L L +N +  L +++  L  L  L +  N+++  P  IG+L  L+ L++ FN +  +
Sbjct: 326 LQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLKNLQELNLGFNQLTTL 385

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           P EIG    L + +   NQL  LP  +G+   L      NN I S
Sbjct: 386 PQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNNPIAS 430


>gi|255070739|ref|XP_002507451.1| predicted protein [Micromonas sp. RCC299]
 gi|226522726|gb|ACO68709.1| predicted protein [Micromonas sp. RCC299]
          Length = 395

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/236 (35%), Positives = 131/236 (55%), Gaps = 2/236 (0%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +PA +G L  LK+L++  N +  +P EIG  T+L +    +N L  +P+ +G+  +L   
Sbjct: 141 VPAEVGRLSALKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQLTSLKVL 200

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
               N +TSLP ++   + + +L + GN+LT L    I   T L +L  S+N L  +P  
Sbjct: 201 GLGGNQLTSLPAEIGRLTSLQELWLNGNQLTSLLAE-IGQLTALEKLHLSRNQLTRVPVE 259

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L+ L  L L  N++ S+P+ +    SL    + NN L+++PAE+G+L  L  L LH+
Sbjct: 260 IGQLTALRELYLQHNQLTSVPAEVGQHRSLKVLSLYNNQLTSVPAEIGQLGWLKVLYLHN 319

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           NQL     E  QL  L  L L NN L+ +P EIG++ +L +L L  N L  L ++L
Sbjct: 320 NQLTSVPAEIGQLTSLQELFLYNNQLTRVPAEIGQLRSLERLDLNRNQLTRLPAAL 375



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 135/263 (51%), Gaps = 8/263 (3%)

Query: 42  WEAVDLQKLILAHNNIEKLK------EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS 95
           WE V ++   +    +E+         ++  L  L  L +  N+L+ +PA IG+L  L+ 
Sbjct: 117 WEGVTMENGRVVKLELERFGLTGAVPAEVGRLSALKTLELWQNRLTSVPAEIGQLTSLER 176

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           L +  N +  +P EIG  T+L       NQL  LP+ +GR  +L +   + N +TSL  +
Sbjct: 177 LRLHNNHLTSVPAEIGQLTSLKVLGLGGNQLTSLPAEIGRLTSLQELWLNGNQLTSLLAE 236

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           +   + + KL +  N+LT +    I   T L EL    N L  +P  +G    L  L L+
Sbjct: 237 IGQLTALEKLHLSRNQLTRVPVE-IGQLTALRELYLQHNQLTSVPAEVGQHRSLKVLSLY 295

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N++ S+P+ I     L   Y+ NN L+++PAE+G+L+ L  L L++NQL     E  QL
Sbjct: 296 NNQLTSVPAEIGQLGWLKVLYLHNNQLTSVPAEIGQLTSLQELFLYNNQLTRVPAEIGQL 355

Query: 276 R-LSVLDLSNNSLSGLPPEIGKM 297
           R L  LDL+ N L+ LP  + K+
Sbjct: 356 RSLERLDLNRNQLTRLPAALCKL 378



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 119/230 (51%), Gaps = 1/230 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N +  +  ++  L  L  L + +N L+ +PA IG+L  LK L +  N +  +
Sbjct: 151 LKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQLTSLKVLGLGGNQLTSL 210

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+L +   + NQL  L + +G+   L     S N +T +P ++   + + +L 
Sbjct: 211 PAEIGRLTSLQELWLNGNQLTSLLAEIGQLTALEKLHLSRNQLTRVPVEIGQLTALRELY 270

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+LT +    +     L  L    N L  +P  IG L  L  L LH N++ S+P+ I
Sbjct: 271 LQHNQLTSVPAE-VGQHRSLKVLSLYNNQLTSVPAEIGQLGWLKVLYLHNNQLTSVPAEI 329

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
               SL E ++ NN L+ +PAE+G+L  L  LDL+ NQL       C+LR
Sbjct: 330 GQLTSLQELFLYNNQLTRVPAEIGQLRSLERLDLNRNQLTRLPAALCKLR 379



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 131/262 (50%), Gaps = 15/262 (5%)

Query: 153 PEDLADCS----KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           PED    +    ++ KL++E   LT      +   + L  L   +N L  +P  IG L+ 
Sbjct: 114 PEDWEGVTMENGRVVKLELERFGLTGAVPAEVGRLSALKTLELWQNRLTSVPAEIGQLTS 173

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RL LH N + S+P+ I    SL    +G N L++LPAE+G+L+ L  L L+ NQL   
Sbjct: 174 LERLRLHNNHLTSVPAEIGQLTSLKVLGLGGNQLTSLPAEIGRLTSLQELWLNGNQLTSL 233

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E  QL  L  L LS N L+ +P EIG++T LR+L L  N L ++ + +    +  +L 
Sbjct: 234 LAEIGQLTALEKLHLSRNQLTRVPVEIGQLTALRELYLQHNQLTSVPAEVGQHRSLKVLS 293

Query: 328 YLRSRLPE--NEDSEASTTK------EDLITMATRLS-VTS-KELSLEGMNLSAIPSEIW 377
              ++L     E  +    K        L ++   +  +TS +EL L    L+ +P+EI 
Sbjct: 294 LYNNQLTSVPAEIGQLGWLKVLYLHNNQLTSVPAEIGQLTSLQELFLYNNQLTRVPAEIG 353

Query: 378 EAGEITKLDLSRNSIQELPPEL 399
           +   + +LDL+RN +  LP  L
Sbjct: 354 QLRSLERLDLNRNQLTRLPAAL 375



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 109/229 (47%), Gaps = 38/229 (16%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            L   +P  +G LS L  L+L QNR+ S+P+ I    SL    + NN L+++PAE+G+L+
Sbjct: 136 GLTGAVPAEVGRLSALKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQLT 195

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L                       VL L  N L+ LP EIG++T+L++L L GN L +L
Sbjct: 196 SL----------------------KVLGLGGNQLTSLPAEIGRLTSLQELWLNGNQLTSL 233

Query: 314 RSSLVNGPTPALLKYLRS-----RLPENEDSEASTTKEDLITMATRLSVTS--------K 360
            + +  G   AL K   S     R+P  E  + +  +E  +      SV +        K
Sbjct: 234 LAEI--GQLTALEKLHLSRNQLTRVPV-EIGQLTALRELYLQHNQLTSVPAEVGQHRSLK 290

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            LSL    L+++P+EI + G +  L L  N +  +P E+    SLQ  F
Sbjct: 291 VLSLYNNQLTSVPAEIGQLGWLKVLYLHNNQLTSVPAEIGQLTSLQELF 339


>gi|355562779|gb|EHH19373.1| hypothetical protein EGK_20064 [Macaca mulatta]
          Length = 582

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 162/349 (46%), Gaps = 62/349 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSK-------------------------------- 161
           G   +LS      N ++++P  L+ CS                                 
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPXSLLSSLVKLNSLTLAR 340

Query: 162 ----------------MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
                           +  L++E N++  +   + +   +L++L    N L  +P   G+
Sbjct: 341 NCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT 400

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            + ++ L+L  N++  IP  +SG  SL    + NN L  LP  LG L KL  LDL  N+L
Sbjct: 401 WTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKL 460

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +    E   L+ L  L L+NN L+ LP  IG +T L  L L  N L  L
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHL 509



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 175/382 (45%), Gaps = 70/382 (18%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 146 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 205

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I + + L       N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 206 TVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 265

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+LS L RL L  NR+ +IP 
Sbjct: 266 LDLQHNELL------------------------DLPDTIGNLSSLSRLGLRYNRLSAIPR 301

Query: 225 SISGCCSLAEFY------------------------MGNNALSALP-AELGKLSKLGTLD 259
           S+S C +L E                          +  N     P     + S + +L+
Sbjct: 302 SLSKCSALEELNLENNNISTLPXSLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 361

Query: 260 LHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR--- 314
           +  N++ +  + + +    LS L++ +N L+ LP + G  T++ +L L  N L  +    
Sbjct: 362 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDV 421

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           S LV+     L   L  +LP              +    +L    +EL LE   L ++P+
Sbjct: 422 SGLVSLEVLILSNNLLKKLPHG------------LGNLRKL----RELDLEENKLESLPN 465

Query: 375 EIWEAGEITKLDLSRNSIQELP 396
           EI    ++ KL L+ N +  LP
Sbjct: 466 EIAYLKDLQKLVLTNNQLTTLP 487



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 27/245 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +   ++L     SNN +  LP  L +  K+ +LD+E NKL  L N  IA    L +L+ 
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNE-IAYLKDLQKLVL 478

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAELG 250
           + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP EL 
Sbjct: 479 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 538

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLTGN 308
             SKL                      S++ + N  LS LPP+I  G  + + + L    
Sbjct: 539 LCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQG 576

Query: 309 PLRTL 313
           P R +
Sbjct: 577 PYRAM 581



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 2/202 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSL 317
            +++L +L L  N L  +  SL
Sbjct: 282 NLSSLSRLGLRYNRLSAIPRSL 303



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 37/202 (18%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N +  +P+EI     L K   ++
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN 480

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LADC 159
           NQL  LP  +G   NL+      N +T LPE+                        LA C
Sbjct: 481 NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC 540

Query: 160 SKMSKLDVEGNKLTVLSNNLIA 181
           SK+S + +E   L+ L   ++A
Sbjct: 541 SKLSIMSIENCPLSHLPPQIVA 562



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 39/208 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G                   
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVG------------------- 143

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              C + L  L LS NSL+ LP  +  +  LR L L  N LR + S +    +   L YL
Sbjct: 144 ---CLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTL-YL 199

Query: 330 R-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           R +R+         TT E  I   ++LS+    LS+    +  +P+EI E   +  LD++
Sbjct: 200 RFNRI---------TTVEKDIKNLSKLSM----LSIRENKIKQLPAEIGELCNLITLDVA 246

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNK 416
            N ++ LP E+ +C   Q+   DL  N+
Sbjct: 247 HNQLEHLPKEIGNCT--QITNLDLQHNE 272


>gi|395740179|ref|XP_003777373.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Pongo
           abelii]
          Length = 1780

 Score =  130 bits (327), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 115/401 (28%), Positives = 184/401 (45%), Gaps = 53/401 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + +R+   L L    LR++P   ++              ++L+KL L+ N I++L 
Sbjct: 29  EEIYRYSRSLEELLLDANQLRELPKPFFR-------------LLNLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++PD      +L     
Sbjct: 76  PEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLAL 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L  
Sbjct: 136 NDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTL-G 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L EL   +N L+ +P  +G+L RL+ LD+ +NR+  +P+ + G   L +  +  N 
Sbjct: 195 ALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L  LP  +G+L +L  L +  N+L E    +  C+  LS L L+ N L  LP  +GK+T 
Sbjct: 255 LRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCE-NLSELILTENLLMALPRSLGKLTK 313

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N L  L                    PE             I     LSV  
Sbjct: 314 LTNLNVDRNHLEALP-------------------PE-------------IGGCVALSV-- 339

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
             LSL    L+ +P E+    E+  LD++ N +Q LP  L+
Sbjct: 340 --LSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALT 378



 Score =  119 bits (298), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 106/358 (29%), Positives = 171/358 (47%), Gaps = 43/358 (12%)

Query: 54  HNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           H +++ + E++ R    L  L +  N+L ELP     L  L+ L +S N I ++P E+ +
Sbjct: 21  HCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVAN 80

Query: 113 ATALVKFDCSSNQLKELPSSLGRC--LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
              LV+ D S N + E+P S+  C  L ++DF  S N ++ LP+       ++ L +   
Sbjct: 81  FMQLVELDVSRNDIPEIPESIKFCKALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDV 138

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
            L  L  + + +   L  L   +NLL  +P ++  L +L +LDL  N +  +P ++    
Sbjct: 139 SLQALPGD-VGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALP 197

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSG 289
           +L E ++  N LSALP ELG L +L  LD+  N+L+E   E   L L    L S N L  
Sbjct: 198 NLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRR 257

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LP  IG++  L                       ++LK  ++RL E   +EA    E+L 
Sbjct: 258 LPDGIGQLKQL-----------------------SILKVDQNRLCEV--TEAIGDCENL- 291

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
                      EL L    L A+P  + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 292 ----------SELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  114 bits (284), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 85/277 (30%), Positives = 142/277 (51%), Gaps = 14/277 (5%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R+   L L++ SL+ +P +V                 +L  L L  N ++ L   L  L 
Sbjct: 128 RSLAHLALNDVSLQALPGDV-------------GNLANLVTLELRENLLKSLPASLSFLV 174

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L++  N L  LP  +G L  L+ L +  N +  +P E+G+   LV  D S N+L+E
Sbjct: 175 KLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEE 234

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP+ LG  + L+D   S N +  LP+ +    ++S L V+ N+L  ++   I     L+E
Sbjct: 235 LPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTE-AIGDCENLSE 293

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI ++NLL  +P ++G L++L  L++ +N + ++P  I GC +L+   + +N L+ LP E
Sbjct: 294 LILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPEIGGCVALSVLSLRDNRLAVLPPE 353

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           L   ++L  LD+  N+L+        L L  L L+ N
Sbjct: 354 LAHTAELHVLDVAGNRLQSLPFALTHLNLKALWLAEN 390


>gi|355561805|gb|EHH18437.1| hypothetical protein EGK_15027, partial [Macaca mulatta]
          Length = 514

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 191/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 19  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 65

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N++ E+P +I     L+  D S N + ++P+       L     
Sbjct: 66  PEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSV 125

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 126 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 184

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 185 ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 244

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL KL                      S+L +  N L+ LP  +G   +L 
Sbjct: 245 LETIPDGIGKLKKL----------------------SILKVDQNRLTQLPEAVGDCESLT 282

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 283 ELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 329

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 330 FCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTA 369



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 142 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 201

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 202 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 261

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 262 KVDQNRLTQLPE-AVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 320

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 321 IGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 380

Query: 286 S 286
            
Sbjct: 381 Q 381



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 156/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N++ E+P S+  C 
Sbjct: 36  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCK 95

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 96  ALQVADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 152

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 153 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 212

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L T+  
Sbjct: 213 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPD 250

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 251 GIGKLKKLSILKVDQNRL--TQLPEAVGDCESLT-----------ELVLTENQLLTLPKS 297

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 298 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 329



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 28  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 87

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 88  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 147

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 148 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 194

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 195 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 242


>gi|256072891|ref|XP_002572767.1| shoc2 [Schistosoma mansoni]
 gi|360043065|emb|CCD78477.1| putative shoc2 [Schistosoma mansoni]
          Length = 532

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 161/328 (49%), Gaps = 41/328 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++ +  L ++P  VYK               +L  L L  N I  + E+++ L  L VL
Sbjct: 177 LDIRHNKLCEIPQVVYK-------------LHNLTHLFLRFNRIRVVDEEIKYLTKLQVL 223

Query: 74  NVSHNKLSELPA--AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           ++  NK+  LPA   IG+L  L +LDVS N + ++ ++IG    L       N+L+ LP+
Sbjct: 224 SLRENKIHTLPADPGIGQLTNLITLDVSHNHLEQLSEKIGHCQKLCTLSLQHNELRSLPN 283

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           ++G    L +     N + SLP+ LA C+ + +L++EGN +  L   L+     ++ +  
Sbjct: 284 TIGDLKMLENIGLKYNHLESLPDSLALCTNLLELNIEGNNIWQLPEGLLTHLKKVSCVTL 343

Query: 192 SKNLLN----GMPETIGSL---------------------SRLIRLDLHQNRILSIPSSI 226
           S+N  N    G P+   S+                     S L +L++  N+I + P  I
Sbjct: 344 SRNYFNIFPSGGPQQFTSIQSLNMEYNQITRIPFGIFSRASNLTKLNMKDNQIGAFPPDI 403

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               SL E  +G N L+ LP ++  L  L  L L +NQLK+  V   +L +L VLDL  N
Sbjct: 404 KSWTSLVELNVGTNQLTKLPDDIEYLINLEVLILSNNQLKQIPVTIRELQKLQVLDLEEN 463

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L  LPP+IG +  L++L++  N L +L
Sbjct: 464 HLESLPPDIGYLGELQRLVVQSNRLTSL 491



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 50/273 (18%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +  +L  L ++HN++E+L E + +   L  L++ HN+L  LP  IG+L ML+++ + +N 
Sbjct: 241 QLTNLITLDVSHNHLEQLSEKIGHCQKLCTLSLQHNELRSLPNTIGDLKMLENIGLKYNH 300

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSL----------------------------- 133
           +  +PD +   T L++ +   N + +LP  L                             
Sbjct: 301 LESLPDSLALCTNLLELNIEGNNIWQLPEGLLTHLKKVSCVTLSRNYFNIFPSGGPQQFT 360

Query: 134 --------------------GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
                                R  NL+     +N I + P D+   + + +L+V  N+LT
Sbjct: 361 SIQSLNMEYNQITRIPFGIFSRASNLTKLNMKDNQIGAFPPDIKSWTSLVELNVGTNQLT 420

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L ++ I     L  LI S N L  +P TI  L +L  LDL +N + S+P  I     L 
Sbjct: 421 KLPDD-IEYLINLEVLILSNNQLKQIPVTIRELQKLQVLDLEENHLESLPPDIGYLGELQ 479

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
              + +N L++LP E+G+L  L  L +  N+L+
Sbjct: 480 RLVVQSNRLTSLPREIGRLYNLIYLAVGENELQ 512



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 166/408 (40%), Gaps = 70/408 (17%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGE----GDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           T G L+    S+RDV + + + +    +     ++      L+ L++  N++  L E L 
Sbjct: 110 TKGQLHFLPPSIRDVAHHLKELYLYCNKLVNLPNEIGTLFALEILMVQENSLSDLPETLA 169

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
               L VL++ HNKL E+P  + +LH L  L + FN I  + +EI   T L       N+
Sbjct: 170 QCTQLRVLDIRHNKLCEIPQVVYKLHNLTHLFLRFNRIRVVDEEIKYLTKLQVLSLRENK 229

Query: 126 LKELPS--SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           +  LP+   +G+  NL     S+N +  L E +  C K+  L ++ N+L           
Sbjct: 230 IHTLPADPGIGQLTNLITLDVSHNHLEQLSEKIGHCQKLCTLSLQHNEL----------- 278

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                          +P TIG L  L  + L  N + S+P S++ C +L E  +  N + 
Sbjct: 279 -------------RSLPNTIGDLKMLENIGLKYNHLESLPDSLALCTNLLELNIEGNNIW 325

Query: 244 ALP-AELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LDLSNNSLSGLPPEI-GKMTT 299
            LP   L  L K+  + L  N    +     Q   S+  L++  N ++ +P  I  + + 
Sbjct: 326 QLPEGLLTHLKKVSCVTLSRNYFNIFPSGGPQQFTSIQSLNMEYNQITRIPFGIFSRASN 385

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L KL +  N +         G  P  +K   S +                          
Sbjct: 386 LTKLNMKDNQI---------GAFPPDIKSWTSLV-------------------------- 410

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            EL++    L+ +P +I     +  L LS N ++++P  +     LQV
Sbjct: 411 -ELNVGTNQLTKLPDDIEYLINLEVLILSNNQLKQIPVTIRELQKLQV 457



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 163/343 (47%), Gaps = 19/343 (5%)

Query: 71  TVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           T L+++  +L  LP +I ++ H LK L +  N ++ +P+EIG+  AL       N L +L
Sbjct: 105 TRLDLTKGQLHFLPPSIRDVAHHLKELYLYCNKLVNLPNEIGTLFALEILMVQENSLSDL 164

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P +L +C  L      +N +  +P+ +     ++ L +  N++ V+    I   T L  L
Sbjct: 165 PETLAQCTQLRVLDIRHNKLCEIPQVVYKLHNLTHLFLRFNRIRVVDEE-IKYLTKLQVL 223

Query: 190 IASKNLLNGMPET--IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
              +N ++ +P    IG L+ LI LD+  N +  +   I  C  L    + +N L +LP 
Sbjct: 224 SLRENKIHTLPADPGIGQLTNLITLDVSHNHLEQLSEKIGHCQKLCTLSLQHNELRSLPN 283

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS--NNSLSGLPPEIGKMTTLRKLLL 305
            +G L  L  + L  N L E   ++  L  ++L+L+   N++  LP   G +T L+K+  
Sbjct: 284 TIGDLKMLENIGLKYNHL-ESLPDSLALCTNLLELNIEGNNIWQLPE--GLLTHLKKVSC 340

Query: 306 TGNPLRTLRSSLVN-GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
                 TL  +  N  P+    ++   +    E ++ +     + + A+ L+    +L++
Sbjct: 341 V-----TLSRNYFNIFPSGGPQQFTSIQSLNMEYNQITRIPFGIFSRASNLT----KLNM 391

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +   + A P +I     + +L++  N + +LP ++    +L+V
Sbjct: 392 KDNQIGAFPPDIKSWTSLVELNVGTNQLTKLPDDIEYLINLEV 434



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 3/120 (2%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           W   V+L    +  N + KL +D+  L  L VL +S+N+L ++P  I EL  L+ LD+  
Sbjct: 406 WTSLVELN---VGTNQLTKLPDDIEYLINLEVLILSNNQLKQIPVTIRELQKLQVLDLEE 462

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N +  +P +IG    L +    SN+L  LP  +GR  NL       N + S+P ++   S
Sbjct: 463 NHLESLPPDIGYLGELQRLVVQSNRLTSLPREIGRLYNLIYLAVGENELQSIPNEIVSTS 522



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 25/169 (14%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT LN+  N++   P  I     L  L+V  N + K+PD+I     L     S+NQLK++
Sbjct: 386 LTKLNMKDNQIGAFPPDIKSWTSLVELNVGTNQLTKLPDDIEYLINLEVLILSNNQLKQI 445

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P ++     L       N + SLP D+    ++ +L V+ N+LT                
Sbjct: 446 PVTIRELQKLQVLDLEENHLESLPPDIGYLGELQRLVVQSNRLT---------------- 489

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYM 237
                    +P  IG L  LI L + +N + SIP+ I S    L + Y+
Sbjct: 490 --------SLPREIGRLYNLIYLAVGENELQSIPNEIVSTSTGLFQSYI 530



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           +  A +L KL +  N I     D+++   L  LNV  N+L++LP  I  L  L+ L +S 
Sbjct: 380 FSRASNLTKLNMKDNQIGAFPPDIKSWTSLVELNVGTNQLTKLPDDIEYLINLEVLILSN 439

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + +IP  I     L   D   N L+ LP  +G    L      +N +TSLP ++    
Sbjct: 440 NQLKQIPVTIRELQKLQVLDLEENHLESLPPDIGYLGELQRLVVQSNRLTSLPREIGRLY 499

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTE 188
            +  L V  N+L  + N ++++ T L +
Sbjct: 500 NLIYLAVGENELQSIPNEIVSTSTGLFQ 527


>gi|241623176|ref|XP_002407534.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
 gi|215501009|gb|EEC10503.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
          Length = 1327

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 141/268 (52%), Gaps = 2/268 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + KL      L  LTVL ++   L++LP   G L  L SL++  N +  +
Sbjct: 14  LQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFGGLSNLMSLELRENYLKGL 73

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P        L + D  SN  +ELP  +G+  +L +    +N +++LP+++    ++  LD
Sbjct: 74  PLSFAFLVKLERLDLGSNDFEELPVVIGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLD 133

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  NKL+ L + L      LT+L  S+N L  +PE +G L +L    + QNR+ S+P+SI
Sbjct: 134 VSENKLSSLPDEL-CDLESLTDLHLSQNYLEVLPEEMGRLRKLTIFKVDQNRLGSLPASI 192

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
             C SL E  + +N L+ LP  +G+L  L  L+   NQL E   +  QL RL VL L  N
Sbjct: 193 GDCESLQELILTDNLLTELPESVGQLVNLTNLNADCNQLSELPPQIGQLARLGVLSLREN 252

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L  LPPE G +  L  L ++GN L+ L
Sbjct: 253 CLQKLPPETGTLRRLHVLDVSGNRLQHL 280



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 110/241 (45%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N+ E+L   +  L  L  L +  N+LS LP  IG+L  L  LDVS N + 
Sbjct: 81  VKLERLDLGSNDFEELPVVIGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLS 140

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PDE+    +L     S N L+ LP  +GR   L+ FK   N + SLP  + DC     
Sbjct: 141 SLPDELCDLESLTDLHLSQNYLEVLPEEMGRLRKLTIFKVDQNRLGSLPASIGDCES--- 197

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                L ELI + NLL  +PE++G L  L  L+   N++  +P 
Sbjct: 198 ---------------------LQELILTDNLLTELPESVGQLVNLTNLNADCNQLSELPP 236

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I     L    +  N L  LP E G L +L  LD+  N+L+   +    L L  L L+ 
Sbjct: 237 QIGQLARLGVLSLRENCLQKLPPETGTLRRLHVLDVSGNRLQHLPLTVTALNLKALWLAK 296

Query: 285 N 285
           N
Sbjct: 297 N 297



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 139/328 (42%), Gaps = 59/328 (17%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           + E+P  I  L  L+S D S N + K+P       +L     +   L +LP   G   NL
Sbjct: 1   VQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFGGLSNL 60

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
              +   N +  LP   A   K+ +LD+  N    L   +I   + L EL    N L+ +
Sbjct: 61  MSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPV-VIGQLSSLQELWLDSNELSTL 119

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P+ IG L RL+ LD+ +N++ S+P  +    SL + ++  N L  LP E+G+L KL    
Sbjct: 120 PKEIGQLRRLMCLDVSENKLSSLPDELCDLESLTDLHLSQNYLEVLPEEMGRLRKL---- 175

Query: 260 LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
                             ++  +  N L  LP  IG   +L++L+LT N           
Sbjct: 176 ------------------TIFKVDQNRLGSLPASIGDCESLQELILTDN----------- 206

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                    L + LPE              ++   +++T+  L+ +   LS +P +I + 
Sbjct: 207 ---------LLTELPE--------------SVGQLVNLTN--LNADCNQLSELPPQIGQL 241

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQV 407
             +  L L  N +Q+LPPE  +   L V
Sbjct: 242 ARLGVLSLRENCLQKLPPETGTLRRLHV 269


>gi|398341320|ref|ZP_10526023.1| cytoplasmic membrane protein [Leptospira kirschneri serovar Bim
           str. 1051]
          Length = 353

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 162/311 (52%), Gaps = 22/311 (7%)

Query: 6   KAARTSGS---LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           KA + S +   L+LS ++L   P E+  +KN               LQKL L+ N +  L
Sbjct: 35  KALQNSSNVRVLDLSFQNLTSFPKEIGQFKN---------------LQKLDLSGNELTVL 79

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +++  L  L  L++  NKL+ LP  I +L  LK+LD+  N +M +P E+     L K +
Sbjct: 80  SKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLN 139

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S N+L  +P  +G+  NL   K  +N I SLP+++    ++ +L +E N+   +    +
Sbjct: 140 LSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEAL 199

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                L +L  S+N L  +P+ I  L  L  L L +N+I  +P+ +    +L E Y+  N
Sbjct: 200 -QLKNLQKLNLSENQLVSIPKEILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSEN 258

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
             ++LP E+ KL  L  L L +N+L     E  QL+ L  L+L NN L+ LP EIG++  
Sbjct: 259 QFTSLPKEIDKLKNLRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLKN 318

Query: 300 LRKLLLTGNPL 310
           L++L L  NPL
Sbjct: 319 LQRLELDSNPL 329



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 144/315 (45%), Gaps = 38/315 (12%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+SF ++   P EIG    L K D S N+L  L   + +  NL +    +N +T+L
Sbjct: 43  VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+L  +   ++   T L +L  S N LN +P+ IG L  L  L
Sbjct: 103 PKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQT-LEKLNLSLNRLNAVPKEIGQLKNLQIL 161

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  N+I+S+P  I G   L E  + NN    +P E  +L  L  L+L  NQL     E 
Sbjct: 162 KLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEI 221

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  L L  N ++ LP E+ ++  L++L L+ N   +L   +        LK LR 
Sbjct: 222 LQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDK------LKNLRW 275

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                         LSL+   L+ +P EI +   + +L+L  N 
Sbjct: 276 ------------------------------LSLKNNRLTTLPKEIGQLKNLQRLELGNNQ 305

Query: 392 IQELPPELSSCASLQ 406
           +  LP E+    +LQ
Sbjct: 306 LTNLPKEIGQLKNLQ 320



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           L N   ++VP E               +  +LQKL L+ N +  + +++  L  L  L +
Sbjct: 186 LENNRFKNVPGEA-------------LQLKNLQKLNLSENQLVSIPKEILQLQNLRDLVL 232

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
             N+++ LP  + +L  L+ L +S N    +P EI     L      +N+L  LP  +G+
Sbjct: 233 DRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLTTLPKEIGQ 292

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             NL   +  NN +T+LP+++     + +L+++ N L+
Sbjct: 293 LKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPLS 330



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 22/162 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLS   L  +P E+              +  +L+ L+L  N I  L  ++  L  L  
Sbjct: 206 KLNLSENQLVSIPKEI-------------LQLQNLRDLVLDRNQITILPTEVLQLQNLQE 252

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S N+ + LP  I +L  L+ L +  N +  +P EIG    L + +  +NQL  LP  
Sbjct: 253 LYLSENQFTSLPKEIDKLKNLRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKE 312

Query: 133 LGRCLNLSDFKASNNCITSLPED-----LADCSKMSKLDVEG 169
           +G+  NL   +  +N ++S  ++     L +C    ++D EG
Sbjct: 313 IGQLKNLQRLELDSNPLSSKEKEKVVKLLPNC----EIDFEG 350


>gi|118088954|ref|XP_419907.2| PREDICTED: leucine-rich repeat-containing protein 1 [Gallus gallus]
          Length = 473

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L++ +N+L  LP  IG L  LK L +  N + +
Sbjct: 101 NLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAE 160

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E+G+   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    K+S L
Sbjct: 161 IPQEVGNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSIL 220

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ NKL  L+++ I     LTEL+ ++N L  +P++IG L +L  L+  +N++ S+P  
Sbjct: 221 KVDQNKLIQLTDS-IGDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLTSLPKE 279

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N LS +P+E+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 280 IGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPISLTTLKLKALWLSDN 339

Query: 286 S 286
            
Sbjct: 340 Q 340



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 170/363 (46%), Gaps = 40/363 (11%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           +++ V L+KL L+ N I++L  ++ N   L  L++S N + E+P +I     L+  D S 
Sbjct: 4   FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSG 63

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + ++P+       L     +   L+ LP ++G   NL+  +   N +T LPE LA   
Sbjct: 64  NPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQ 123

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++ +LD+  N+L  L   + A +  L +L    N L  +P+ +G+L  L+ LD+ +N++ 
Sbjct: 124 RLEELDLGNNELYHLPETIGALFN-LKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLE 182

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLS 278
            +P  I+G  SL +  +  N L  LP  +GKL KL  L +  N+L +    +  C+  L+
Sbjct: 183 CLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSILKVDQNKLIQLTDSIGDCE-SLT 241

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            L L+ N L  LP  IGK+  L  L                                N D
Sbjct: 242 ELVLTENQLQILPKSIGKLKKLNNL--------------------------------NAD 269

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
               T+    I     L+V     S+    LS IPSEI +A E+  LD++ N +  LP  
Sbjct: 270 RNKLTSLPKEIGGCCSLNV----FSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPIS 325

Query: 399 LSS 401
           L++
Sbjct: 326 LTT 328



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 152/326 (46%), Gaps = 42/326 (12%)

Query: 85  AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDF 142
           A   +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C  L ++DF
Sbjct: 2   APFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADF 61

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             S N +T LPE             E   LT LS N I+              L  +PE 
Sbjct: 62  --SGNPLTRLPESFP----------ELQNLTCLSVNDIS--------------LQALPEN 95

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG+L  L  L+L +N +  +P S++    L E  +GNN L  LP  +G L  L  L L  
Sbjct: 96  IGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDG 155

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL E   E   L+ L  LD+S N L  LP EI  +T+L  LL++ N L+ L   +    
Sbjct: 156 NQLAEIPQEVGNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLR 215

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
             ++LK  +++L +  DS                S+T  EL L    L  +P  I +  +
Sbjct: 216 KLSILKVDQNKLIQLTDSIGDCE-----------SLT--ELVLTENQLQILPKSIGKLKK 262

Query: 382 ITKLDLSRNSIQELPPELSSCASLQV 407
           +  L+  RN +  LP E+  C SL V
Sbjct: 263 LNNLNADRNKLTSLPKEIGGCCSLNV 288



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 46/95 (48%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D   +   L +L+L  N ++ L + +  L  L  LN   NKL+ LP  IG    L    V
Sbjct: 232 DSIGDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLTSLPKEIGGCCSLNVFSV 291

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
             N + +IP EI  AT L   D + N+L  LP SL
Sbjct: 292 RDNRLSRIPSEISQATELHVLDVAGNRLTYLPISL 326


>gi|67970427|dbj|BAE01556.1| unnamed protein product [Macaca fascicularis]
          Length = 518

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 191/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N++ E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 136 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 195 ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL KL                      S+L +  N L+ LP  +G   +L 
Sbjct: 255 LETIPDGIGKLKKL----------------------SILKVDQNRLTQLPEAVGDCESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 293 ELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 340 FCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTA 379



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPEA-VGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 156/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N++ E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQVADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L T+  
Sbjct: 223 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 261 GIGKLKKLSILKVDQNRL--TQLPEAVGDCESLT-----------ELVLTENQLLTLPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 308 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|403268883|ref|XP_003926491.1| PREDICTED: leucine-rich repeat-containing protein 1 [Saimiri
           boliviensis boliviensis]
          Length = 547

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 177/364 (48%), Gaps = 36/364 (9%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           G ++++ V L+KL L+ N I++L  ++ N   L  L+VS N + E+P +I     L+  D
Sbjct: 75  GWQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIAD 134

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
            S N +M++P        L     +   L+ LP ++G   NL+  +   N +T LP+ L 
Sbjct: 135 FSGNPLMRLPKSFPELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLT 194

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
              ++ +LD+  N++  L  + I +   L +L    N L+ +P+ IG+L  L+ LD+ +N
Sbjct: 195 QLRRLEELDLGNNEIHSLPES-IGALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 253

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL 277
           R+  +P  ISG  SL +  +  N L  +P  +GKL K                      L
Sbjct: 254 RLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK----------------------L 291

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
           S+L +  N L+ LP  +G   +L +L+LT N L TL  S+        LK L S L  + 
Sbjct: 292 SILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSI------GKLKKL-SNLNADR 344

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
           +   S  KE  I     L+V      L    L+ IP+E+ +A E+  LDL+ N +  LP 
Sbjct: 345 NKLVSLPKE--IGGCCSLTV----FCLRDNRLTRIPAEVSQATELHVLDLAGNRLLHLPL 398

Query: 398 ELSS 401
            L++
Sbjct: 399 SLTA 402



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 175 NLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESIGALLCLKDLWLDGNQLSE 234

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 235 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 294

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 295 KVDQNRLTQLPE-AVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 353

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LDL  N+L    +    L+L  L LS+N
Sbjct: 354 IGGCCSLTVFCLRDNRLTRIPAEVSQATELHVLDLAGNRLLHLPLSLTALKLKALWLSDN 413

Query: 286 S 286
            
Sbjct: 414 Q 414



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 149/321 (46%), Gaps = 40/321 (12%)

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDFKASN 146
           +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C  L ++DF  S 
Sbjct: 80  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADF--SG 137

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +  LP+   +   ++ L V    L  L  N I +   LT L   +NLL  +P+++  L
Sbjct: 138 NPLMRLPKSFPELENLTCLSVNDVSLQSLPEN-IGNLYNLTSLELRENLLTYLPDSLTQL 196

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
            RL  LDL  N I S+P SI     L + ++  N LS LP E+G L  L           
Sbjct: 197 RRLEELDLGNNEIHSLPESIGALLCLKDLWLDGNQLSELPQEIGNLKNL----------- 245

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
             C          LD+S N L  LP EI  +T+L  L+++ N L T+   +      ++L
Sbjct: 246 -LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 294

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           K  ++RL   +  EA    E L            EL L    L  +P  I +  +++ L+
Sbjct: 295 KVDQNRL--TQLPEAVGDCESLT-----------ELVLTENQLLTLPKSIGKLKKLSNLN 341

Query: 387 LSRNSIQELPPELSSCASLQV 407
             RN +  LP E+  C SL V
Sbjct: 342 ADRNKLVSLPKEIGGCCSLTV 362



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 41/232 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +L  S N +  +P  I +  +L+ LD+ +N I  IP SIS C +L       N L  L
Sbjct: 84  LRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRL 143

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P    +L  L  L ++   L+        L  L+ L+L  N L+ LP  + ++  L +L 
Sbjct: 144 PKSFPELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELD 203

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N + +L  S+      ALL                                 K+L L
Sbjct: 204 LGNNEIHSLPESI-----GALLCL-------------------------------KDLWL 227

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 228 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 275


>gi|428175990|gb|EKX44877.1| hypothetical protein GUITHDRAFT_87300 [Guillardia theta CCMP2712]
          Length = 618

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 190/434 (43%), Gaps = 58/434 (13%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           M  IL +  +   LNLS   L D P  + K                L++LIL HN I  L
Sbjct: 79  MPNILTSLTSLTVLNLSRNQLSDCPVHLCK-------------LTLLEELILDHNKISVL 125

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
              + N   L   ++SHN L  LPA+I +   L + D+S N +  +P E+G    L    
Sbjct: 126 PNKIGNCGALRHFSISHNALRSLPASIKDFKRLLNFDLSHNHLTILPAEVGMLPLLDALL 185

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
              N L  +   LG C+NLS      N +T LP +L     ++++D++ N++  + N  I
Sbjct: 186 LPDNMLTTIVKELGGCVNLSHIDLIGNQVTYLPAELGKLRSLARVDLDSNQIGKIPNT-I 244

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                L   +   N L+ +PE+IG L  L  LDL  N I  +P SI     L E  +  N
Sbjct: 245 GRLQSLEIFLMQNNALDSIPESIGQLKSLQELDLSDNNIQLLPLSIGSISDLTELNLSAN 304

Query: 241 ALSALPAELG-----------------------KLSKLGTLDLHSNQLKEYCVEACQLRL 277
           ++SALP E+                        KL+ L +LDL  N+L        +L L
Sbjct: 305 SISALPREIVVLTRLVTFRYSSNNLLTLPSIVCKLTTLTSLDLQENKLNSLPSNFSELPL 364

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             ++LS N+    PP + +MT L  + LT N  R  R   + G      +++ +      
Sbjct: 365 MSINLSRNNFEIFPPPLERMTNLEHIDLTDN--RLTRLPFMIG------RFVYATAILLG 416

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSA-----IPSEIWEAGEITKLDLSRNSI 392
            ++ S   + L  M         E SL+ +NLS      +PS ++    + ++ LS N++
Sbjct: 417 GNQVSVLPDSLGAMG--------EASLQVINLSKNGLFDLPSALFNIKRLERICLSGNNL 468

Query: 393 QELPPELSSCASLQ 406
           +ELP +L     L+
Sbjct: 469 RELPNQLCVLKKLK 482



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 169/351 (48%), Gaps = 16/351 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L L  N  E +   L +L  LTVLN+S N+LS+ P  + +L +L+ L +  N I  +
Sbjct: 66  LVRLDLEGNLFETMPNILTSLTSLTVLNLSRNQLSDCPVHLCKLTLLEELILDHNKISVL 125

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P++IG+  AL  F  S N L+ LP+S+     L +F  S+N +T LP ++     +  L 
Sbjct: 126 PNKIGNCGALRHFSISHNALRSLPASIKDFKRLLNFDLSHNHLTILPAEVGMLPLLDALL 185

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N LT +   L      L+ +    N +  +P  +G L  L R+DL  N+I  IP++I
Sbjct: 186 LPDNMLTTIVKEL-GGCVNLSHIDLIGNQVTYLPAELGKLRSLARVDLDSNQIGKIPNTI 244

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               SL  F M NNAL ++P  +G+L  L  LDL  N ++   +    +  L+ L+LS N
Sbjct: 245 GRLQSLEIFLMQNNALDSIPESIGQLKSLQELDLSDNNIQLLPLSIGSISDLTELNLSAN 304

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           S+S LP EI  +T L     + N L TL S +    T   L      L EN+ +   +  
Sbjct: 305 SISALPREIVVLTRLVTFRYSSNNLLTLPSIVCKLTTLTSLD-----LQENKLNSLPSNF 359

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
            +L  M+  LS           N    P  +     +  +DL+ N +  LP
Sbjct: 360 SELPLMSINLSRN---------NFEIFPPPLERMTNLEHIDLTDNRLTRLP 401



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 143/292 (48%), Gaps = 24/292 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L L+ NNI+ L   + ++  LT LN+S N +S LP  I  L  L +   S N+++ +
Sbjct: 273 LQELDLSDNNIQLLPLSIGSISDLTELNLSANSISALPREIVVLTRLVTFRYSSNNLLTL 332

Query: 107 PDEIGSATALVKFDCSSNQLKELPSS----------------------LGRCLNLSDFKA 144
           P  +   T L   D   N+L  LPS+                      L R  NL     
Sbjct: 333 PSIVCKLTTLTSLDLQENKLNSLPSNFSELPLMSINLSRNNFEIFPPPLERMTNLEHIDL 392

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI-ASKNLLNGMPETI 203
           ++N +T LP  +      + + + GN+++VL ++L A      ++I  SKN L  +P  +
Sbjct: 393 TDNRLTRLPFMIGRFVYATAILLGGNQVSVLPDSLGAMGEASLQVINLSKNGLFDLPSAL 452

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
            ++ RL R+ L  N +  +P+ +     L E ++ +N L+ LP+ LG+L  L  L LHSN
Sbjct: 453 FNIKRLERICLSGNNLRELPNQLCVLKKLKELWLDHNQLTYLPSRLGELVSLSALYLHSN 512

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
           +LK       +L+ L VL LS N L  LP +  +++ L +L L  N    L+
Sbjct: 513 RLKMIPKNLVELKGLKVLTLSGNELRELPWDFHRLSELEELWLDDNQFEALQ 564



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 108/245 (44%), Gaps = 5/245 (2%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N +  L  +   LPL+++ N+S N     P  +  +  L+ +D++ N + ++
Sbjct: 342 LTSLDLQENKLNSLPSNFSELPLMSI-NLSRNNFEIFPPPLERMTNLEHIDLTDNRLTRL 400

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDFKASNNCITSLPEDLADCSKMSK 164
           P  IG            NQ+  LP SLG     +L     S N +  LP  L +  ++ +
Sbjct: 401 PFMIGRFVYATAILLGGNQVSVLPDSLGAMGEASLQVINLSKNGLFDLPSALFNIKRLER 460

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           + + GN L  L N L      L EL    N L  +P  +G L  L  L LH NR+  IP 
Sbjct: 461 ICLSGNNLRELPNQLCV-LKKLKELWLDHNQLTYLPSRLGELVSLSALYLHSNRLKMIPK 519

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
           ++     L    +  N L  LP +  +LS+L  L L  NQ +   +E     RL  L   
Sbjct: 520 NLVELKGLKVLTLSGNELRELPWDFHRLSELEELWLDDNQFEALQLERSLFPRLQFLTFR 579

Query: 284 NNSLS 288
           +N L+
Sbjct: 580 HNPLT 584



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           +NLS   L D+P+ ++                 L+++ L+ NN+ +L   L  L  L  L
Sbjct: 438 INLSKNGLFDLPSALFN-------------IKRLERICLSGNNLRELPNQLCVLKKLKEL 484

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + HN+L+ LP+ +GEL  L +L +  N +  IP  +     L     S N+L+ELP   
Sbjct: 485 WLDHNQLTYLPSRLGELVSLSALYLHSNRLKMIPKNLVELKGLKVLTLSGNELRELPWDF 544

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            R   L +    +N   +L  + +   ++  L    N LT
Sbjct: 545 HRLSELEELWLDDNQFEALQLERSLFPRLQFLTFRHNPLT 584



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 56/250 (22%), Positives = 99/250 (39%), Gaps = 64/250 (25%)

Query: 219 ILSIPSSISGCCSLA-EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++++PS I+G CS   +    +N +S + +E+G      TL  + N+L+     AC+LR 
Sbjct: 6   LIAVPSEIAGFCSQPYKVSFAHNHISTISSEIGLFENAQTLCFNDNKLESI---ACELRN 62

Query: 277 --------------------------LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
                                     L+VL+LS N LS  P  + K+T L +L+L  N +
Sbjct: 63  LTRLVRLDLEGNLFETMPNILTSLTSLTVLNLSRNQLSDCPVHLCKLTLLEELILDHNKI 122

Query: 311 RTLRSSLVN--------------GPTPALLKYLRSRLPENEDSEASTTKEDLITMATR-- 354
             L + + N                 PA +K  +  L  +      T     + M     
Sbjct: 123 SVLPNKIGNCGALRHFSISHNALRSLPASIKDFKRLLNFDLSHNHLTILPAEVGMLPLLD 182

Query: 355 --------LSVTSKELS---------LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                   L+   KEL          L G  ++ +P+E+ +   + ++DL  N I ++P 
Sbjct: 183 ALLLPDNMLTTIVKELGGCVNLSHIDLIGNQVTYLPAELGKLRSLARVDLDSNQIGKIPN 242

Query: 398 ELSSCASLQV 407
            +    SL++
Sbjct: 243 TIGRLQSLEI 252


>gi|260815367|ref|XP_002602445.1| hypothetical protein BRAFLDRAFT_198676 [Branchiostoma floridae]
 gi|229287754|gb|EEN58457.1| hypothetical protein BRAFLDRAFT_198676 [Branchiostoma floridae]
          Length = 1065

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 123/217 (56%), Gaps = 1/217 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N+L +LP  +G L  LK L +  N I ++P EIG    L   D S N+L+ L
Sbjct: 129 LEQLDLGANELEDLPETLGALPNLKELWLDGNEIKELPPEIGHLKKLSCLDVSENKLEFL 188

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G  ++L+D   S NC+ +LP+ +    +++ L V+ N++ VL+ + I S   + EL
Sbjct: 189 PDEIGGLVSLTDLHLSQNCLEALPDTIGKLKQLAMLKVDQNRILVLTPD-IGSCERIREL 247

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
           I ++NLL  +P TIG+L  +I  ++ +NR+L++P  I GC  L    + +N L+ LP EL
Sbjct: 248 ILTENLLQEIPPTIGNLKEMINFNVDRNRLLNVPDEIGGCVKLGVLSLRDNRLTRLPNEL 307

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
           G L +L  +D+  N+L+        L L  + LS N 
Sbjct: 308 GNLKELHVMDVAGNRLENLPFSITALNLKAVWLSENQ 344



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 161/329 (48%), Gaps = 40/329 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L++S+  L  +P E+  NF            + L +L  + N++  + E+++    L+V+
Sbjct: 17  LSISDNELLRLPGEI-SNF------------MSLMELDCSRNDLPDIPENIKFCKSLSVV 63

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV---------------- 117
           + S N +++LP    +L  L+ + ++  S+ K+P +IGS + L+                
Sbjct: 64  DFSGNPIAKLPDGFTQLRGLRYVALNDISLHKLPGDIGSLSNLITLELRENLLKVLPTSL 123

Query: 118 -------KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
                  + D  +N+L++LP +LG   NL +     N I  LP ++    K+S LDV  N
Sbjct: 124 SFLVKLEQLDLGANELEDLPETLGALPNLKELWLDGNEIKELPPEIGHLKKLSCLDVSEN 183

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           KL  L +  I     LT+L  S+N L  +P+TIG L +L  L + QNRIL +   I  C 
Sbjct: 184 KLEFLPDE-IGGLVSLTDLHLSQNCLEALPDTIGKLKQLAMLKVDQNRILVLTPDIGSCE 242

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLS 288
            + E  +  N L  +P  +G L ++   ++  N+L     E   C ++L VL L +N L+
Sbjct: 243 RIRELILTENLLQEIPPTIGNLKEMINFNVDRNRLLNVPDEIGGC-VKLGVLSLRDNRLT 301

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            LP E+G +  L  + + GN L  L  S+
Sbjct: 302 RLPNELGNLKELHVMDVAGNRLENLPFSI 330



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 149/329 (45%), Gaps = 46/329 (13%)

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P     L  L+ L +S N ++++P EI +  +L++ DCS N L ++P ++  C +LS   
Sbjct: 5   PQPFFRLMNLRKLSISDNELLRLPGEISNFMSLMELDCSRNDLPDIPENIKFCKSLSVVD 64

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
            S N I  LP+       +                    +  L ++      L+ +P  I
Sbjct: 65  FSGNPIAKLPDGFTQLRGL-------------------RYVALNDIS-----LHKLPGDI 100

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           GSLS LI L+L +N +  +P+S+S    L +  +G N L  LP  LG L  L  L L  N
Sbjct: 101 GSLSNLITLELRENLLKVLPTSLSFLVKLEQLDLGANELEDLPETLGALPNLKELWLDGN 160

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           ++KE   E   L +LS LD+S N L  LP EIG + +L  L L+ N L  L  ++     
Sbjct: 161 EIKELPPEIGHLKKLSCLDVSENKLEFLPDEIGGLVSLTDLHLSQNCLEALPDTIGKLKQ 220

Query: 323 PALLKYLRSRL----PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
            A+LK  ++R+    P+             I    R+    +EL L    L  IP  I  
Sbjct: 221 LAMLKVDQNRILVLTPD-------------IGSCERI----RELILTENLLQEIPPTIGN 263

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQV 407
             E+   ++ RN +  +P E+  C  L V
Sbjct: 264 LKEMINFNVDRNRLLNVPDEIGGCVKLGV 292


>gi|418744943|ref|ZP_13301288.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794274|gb|EKR92184.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 526

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 155/307 (50%), Gaps = 15/307 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS+  L  +P E+ K               +LQKL L  N +  L E++  L  L  L
Sbjct: 174 LDLSSNQLMTLPKEIGK-------------LQNLQKLNLTRNRLANLPEEIGKLQNLQEL 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +++ N+L+ LP  I +L  L+ L ++ N +  +P EIG    L      +NQL  LP  +
Sbjct: 221 HLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     SNN +T+LP+++     + +L +E N+LT L    I     L EL    
Sbjct: 281 GKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKE-IGKLQNLQELRLDY 339

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +PE I  L +L +L    N+  ++P  I    +L    + +N L++LP E+G L 
Sbjct: 340 NRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQ 399

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L  NQL     E  +L+ L +L LS+N L+ LP EIGK+  L++L L  N L T
Sbjct: 400 NLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTT 459

Query: 313 LRSSLVN 319
           L   + N
Sbjct: 460 LPKEIEN 466



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 154/310 (49%), Gaps = 16/310 (5%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
            LNL+   L ++P E+ K  N  E    D     +        +LQ L L +N +  L +
Sbjct: 196 KLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPK 255

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L++ +N+L+ LP  IG+L  L+ L +S N +  +P EIG    L +    
Sbjct: 256 EIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLE 315

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQL  LP  +G+  NL + +   N +T+LPE++    K+ KL   GN+ T +   +   
Sbjct: 316 NNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEI--- 372

Query: 183 WTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           W +  L  L    N L  +P+ IG+L  L  L L  N++ ++P  I    +L   Y+ +N
Sbjct: 373 WNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDN 432

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
            L+ LP E+GKL  L  L L  NQL     E   L+ L  L LS+N L+  P EIGK+  
Sbjct: 433 QLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIENLQSLEYLYLSDNPLTSFPEEIGKLQH 492

Query: 300 LRKLLLTGNP 309
           L+   L   P
Sbjct: 493 LKWFRLENIP 502



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 178/387 (45%), Gaps = 27/387 (6%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL-------LTVLNVSHNKL 80
           VY N  EA +        D+Q L L     +   + L  LP        L  L++S N+L
Sbjct: 127 VYYNLTEALQ-----HPTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQL 181

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
             LP  IG+L  L+ L+++ N +  +P+EIG    L +   + NQL  LP  + +  NL 
Sbjct: 182 MTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQLTTLPKEIEKLQNLQ 241

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               +NN +T+LP+++    K+  L +E N+LT L    I     L  L  S N L  +P
Sbjct: 242 WLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKE-IGKLQNLQWLGLSNNQLTTLP 300

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L  L  L L  N++ ++P  I    +L E  +  N L+ LP E+ KL KL  L  
Sbjct: 301 KEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYS 360

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             NQ      E   L+ L  L+L +N L+ LP EIG +  L+ L L+ N L TL   +  
Sbjct: 361 SGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGK 420

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                LL YL        D++ +T  +++  +        +EL L    L+ +P EI   
Sbjct: 421 LQNLQLL-YL-------SDNQLTTLPKEIGKLQ-----NLQELYLRDNQLTTLPKEIENL 467

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQ 406
             +  L LS N +   P E+     L+
Sbjct: 468 QSLEYLYLSDNPLTSFPEEIGKLQHLK 494



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 138/305 (45%), Gaps = 38/305 (12%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   D SSNQL  LP  +G+  NL     + N + +LPE++     + +L
Sbjct: 161 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQEL 220

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L    I     L  L  + N L  +P+ IG L +L  L L  N++ ++P  
Sbjct: 221 HLTDNQLTTLPKE-IEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKE 279

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + NN L+ LP E+GKL  L  L L +NQL     E  +L+ L  L L  
Sbjct: 280 IGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDY 339

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ LP EI K+  L+KL  +GN   T+   + N      L+ L++             
Sbjct: 340 NRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWN------LQNLQA------------- 380

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
                            L+L    L+++P EI     +  L LS N +  LP E+    +
Sbjct: 381 -----------------LNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQN 423

Query: 405 LQVKF 409
           LQ+ +
Sbjct: 424 LQLLY 428


>gi|327282758|ref|XP_003226109.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Anolis
           carolinensis]
          Length = 524

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 140/273 (51%), Gaps = 4/273 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +
Sbjct: 107 LQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYL 166

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +     L + D  +N L  LP ++G   NL D     N +  LP+++     +  LD
Sbjct: 167 PESVAQLQRLEELDLGNNDLYNLPETIGALYNLKDLWLDGNQLAELPQEIGSLKNLLCLD 226

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NKL  L    I+  T LT+L+ S+NLL  +P+ IG L +L  L + QNR++ +  ++
Sbjct: 227 ISENKLERLPEE-ISGLTSLTDLLISQNLLEVLPDGIGKLKKLSILKVDQNRLVQLTEAV 285

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSN 284
             C SL E  +  N L  LP  +G+L KL  L++  N+L     E   C   L+V  + +
Sbjct: 286 GDCESLTELVLTENQLLTLPKSIGRLKKLNVLNVDRNKLVSLPKEIGGC-CSLNVFSVRD 344

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           N LS +PPEI + T L  L + GN L  L  SL
Sbjct: 345 NRLSRIPPEISQATELHVLDVAGNRLLHLPMSL 377



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 140/258 (54%), Gaps = 8/258 (3%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E +  L  L  L++ +N L  LP  IG L+ LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPESVAQLQRLEELDLGNNDLYNLPETIGALYNLKDLWLDGNQLAE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIGS   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    K+S L
Sbjct: 212 LPQEIGSLKNLLCLDISENKLERLPEEISGLTSLTDLLISQNLLEVLPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+L  L+   +     LTEL+ ++N L  +P++IG L +L  L++ +N+++S+P  
Sbjct: 272 KVDQNRLVQLT-EAVGDCESLTELVLTENQLLTLPKSIGRLKKLNVLNVDRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N LS +P E+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLNVFSVRDNRLSRIPPEISQATELHVLDVAGNRLLHLPMSLTSLKLKALWLSDN 390

Query: 286 SLSGL-------PPEIGK 296
               L        PEIG+
Sbjct: 391 QSQPLLTFQTDTDPEIGE 408



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 186/395 (47%), Gaps = 51/395 (12%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL  VP E+Y+          + ++  E  K +++ V L+KL L+ N I++L  ++ N  
Sbjct: 23  SLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLVKLRKLGLSDNEIQRLPPEIANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L++S N + E+P +I     L+  D S N + ++P+       L     +   L+ 
Sbjct: 83  QLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP ++G   NL+  +   N +T LPE +A   ++ +LD+  N L  L   + A +  L +
Sbjct: 143 LPENIGNLYNLASLELRENLLTYLPESVAQLQRLEELDLGNNDLYNLPETIGALYN-LKD 201

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L    N L  +P+ IGSL  L+ LD+ +N++  +P  ISG  SL +  +  N L  LP  
Sbjct: 202 LWLDGNQLAELPQEIGSLKNLLCLDISENKLERLPEEISGLTSLTDLLISQNLLEVLPDG 261

Query: 249 LGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           +GKL KL  L +  N+L +    V  C+  L+ L L+ N L  LP  IG++  L      
Sbjct: 262 IGKLKKLSILKVDQNRLVQLTEAVGDCE-SLTELVLTENQLLTLPKSIGRLKKL------ 314

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L   R+ LV+ P                       KE  I     L+V     S+  
Sbjct: 315 -NVLNVDRNKLVSLP-----------------------KE--IGGCCSLNV----FSVRD 344

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             LS IP EI +A E+  LD++ N +  LP  L+S
Sbjct: 345 NRLSRIPPEISQATELHVLDVAGNRLLHLPMSLTS 379



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 152/331 (45%), Gaps = 38/331 (11%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCK 105

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           +L     S N +T LPE             E   LT LS N I+              L 
Sbjct: 106 SLQVADFSGNPLTRLPESFP----------ELQNLTCLSVNDIS--------------LQ 141

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +PE IG+L  L  L+L +N +  +P S++    L E  +GNN L  LP  +G L  L  
Sbjct: 142 ALPENIGNLYNLASLELRENLLTYLPESVAQLQRLEELDLGNNDLYNLPETIGALYNLKD 201

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L L  NQL E   E   L+ L  LD+S N L  LP EI  +T+L  LL++ N L  L   
Sbjct: 202 LWLDGNQLAELPQEIGSLKNLLCLDISENKLERLPEEISGLTSLTDLLISQNLLEVLPDG 261

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +      ++LK  ++RL +             +T A     +  EL L    L  +P  I
Sbjct: 262 IGKLKKLSILKVDQNRLVQ-------------LTEAVGDCESLTELVLTENQLLTLPKSI 308

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQV 407
               ++  L++ RN +  LP E+  C SL V
Sbjct: 309 GRLKKLNVLNVDRNKLVSLPKEIGGCCSLNV 339



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 116/277 (41%), Gaps = 42/277 (15%)

Query: 133 LGRCLNLSDFKASNNC-ITSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           L RC    +     +C + ++PE++   S+ + +L ++ N+L  L          L +L 
Sbjct: 7   LWRCNRHVELIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFF-QLVKLRKLG 65

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            S N +  +P  I +  +L+ LDL +N I  IP SIS C SL       N L+ LP    
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFP 125

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           +L  L                 C   LSV D+S   L  LP  IG +  L  L L  N L
Sbjct: 126 ELQNL----------------TC---LSVNDIS---LQALPENIGNLYNLASLELRENLL 163

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMN 368
             L  S+      A L+ L          E      DL  +   +      K+L L+G  
Sbjct: 164 TYLPESV------AQLQRL---------EELDLGNNDLYNLPETIGALYNLKDLWLDGNQ 208

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           L+ +P EI     +  LD+S N ++ LP E+S   SL
Sbjct: 209 LAELPQEIGSLKNLLCLDISENKLERLPEEISGLTSL 245


>gi|418726611|ref|ZP_13285222.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960521|gb|EKO24275.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 447

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 182/389 (46%), Gaps = 16/389 (4%)

Query: 27  EVYKNFDEAGEGDKWWEAV----DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           E+  + DE G      +A+    +++ L L+  N   L +++  L  L  L++  N+L+ 
Sbjct: 26  EIQADEDEPGTYMDLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLAT 85

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
            PA I EL  L+SLD+S N ++ +P+EIG    L +     N+L   P  +G+  NL   
Sbjct: 86  FPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTL 145

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              +N + +LP ++     + KL++  N+LTVL    I     L  L    N L  +P  
Sbjct: 146 NLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKE-IGQLQNLQTLNLQDNQLATLPVE 204

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L L +N++ + P  I    +L E  + NN L+ALP E+G+L  L  L+L  
Sbjct: 205 IGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSE 264

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           NQL  +  E  QL+ L  L LS N L  LP EIG++  L+ L L+ N L  L   +    
Sbjct: 265 NQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLK 324

Query: 322 TPALLKYLRSRLP--------ENEDSEASTTKEDLITMATRLSVTSKELSLE-GMN-LSA 371
              +L    ++               + + +   L T+   +       +L+ G N L+ 
Sbjct: 325 NLQMLDLCYNQFKTVSKKIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTT 384

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELS 400
           +P EI +   +  L L  N +  LP E+ 
Sbjct: 385 LPKEIGQLKNLYNLGLGTNQLTTLPKEIG 413



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 156/303 (51%), Gaps = 15/303 (4%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R   +LNL +  L  +P E+              +  +L+KL L  N +  L +++  L 
Sbjct: 140 RNLQTLNLQDNQLATLPVEI-------------GQLQNLEKLNLRKNRLTVLPKEIGQLQ 186

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  LN+  N+L+ LP  IG+L  L++L +S N +   P EIG    L + D  +N+L  
Sbjct: 187 NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLTA 246

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP  +G+  NL + + S N +T+ P+++    K+  L +  N+L +L    I     L +
Sbjct: 247 LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKE-IGQLEKLQD 305

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S N L  +P+ IG L  L  LDL  N+  ++   I    +L +  +  N L+ LPAE
Sbjct: 306 LGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKKIGQLKNLLQLNLSYNQLATLPAE 365

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G+L  L  LDL +NQL     E  QL+ L  L L  N L+ LP EIG++  L+ LLL+ 
Sbjct: 366 IGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIGQLKKLQWLLLSV 425

Query: 308 NPL 310
           NP+
Sbjct: 426 NPI 428



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 148/325 (45%), Gaps = 38/325 (11%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+LS   L  +PNE+ +               +LQ+L L  N +    +++  L  L  
Sbjct: 98  SLDLSENRLVMLPNEIGR-------------LQNLQELGLYKNKLITFPKEIGQLRNLQT 144

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ LP  IG+L  L+ L++  N +  +P EIG    L   +   NQL  LP  
Sbjct: 145 LNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVE 204

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     S N +T+ P+++     + +LD+  N+LT L    I     L  L  S
Sbjct: 205 IGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLTALPKE-IGQLKNLENLELS 263

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +N L   P+ IG L +L  L L  NR++ +P  I     L +  +  N L  LP E+G+L
Sbjct: 264 ENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQL 323

Query: 253 SKLGTLDLHSNQLKEYC-----------------------VEACQLR-LSVLDLSNNSLS 288
             L  LDL  NQ K                           E  QL+ L  LDL  N L+
Sbjct: 324 KNLQMLDLCYNQFKTVSKKIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLT 383

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTL 313
            LP EIG++  L  L L  N L TL
Sbjct: 384 TLPKEIGQLKNLYNLGLGTNQLTTL 408



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 150/334 (44%), Gaps = 35/334 (10%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEA-----VDLQKL---ILAHNNIEKLKED 63
           LNLS ++   +P E+   KN  E   GD          V+LQKL    L+ N +  L  +
Sbjct: 53  LNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L  L +  NKL   P  IG+L  L++L++  N +  +P EIG    L K +   
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 172

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L  LP  +G+  NL      +N + +LP ++     +  L +  N+LT      I   
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKE-IGQL 231

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL    N L  +P+ IG L  L  L+L +N++ + P  I     L +  +  N L 
Sbjct: 232 ENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLV 291

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL-------------------- 282
            LP E+G+L KL  L L  N+L     E  QL+ L +LDL                    
Sbjct: 292 ILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKKIGQLKNLLQ 351

Query: 283 ---SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
              S N L+ LP EIG++  L  L L  N L TL
Sbjct: 352 LNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTL 385



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 150/351 (42%), Gaps = 63/351 (17%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S    + LP  I +L  L+ LD+  N +   P  I     L   D S N+L  LP+
Sbjct: 52  VLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPN 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +GR  NL +     N + + P+++     +  L+++ N+L  L                
Sbjct: 112 EIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P  IG L  L +L+L +NR+  +P  I    +L    + +N L+ LP E+G+
Sbjct: 156 --------PVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TL L  NQL  +  E  QL  L  LDL NN L+ LP EIG++  L  L L+ N L
Sbjct: 208 LQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQL 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            T    +        LK L                +DL     RL +             
Sbjct: 268 TTFPKEI------GQLKKL----------------QDLGLSYNRLVI------------- 292

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCIS 421
            +P EI +  ++  L LS N +  LP E+    +LQ+   DL  N+   +S
Sbjct: 293 -LPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQM--LDLCYNQFKTVS 340


>gi|402867304|ref|XP_003897800.1| PREDICTED: leucine-rich repeat-containing protein 1 [Papio anubis]
          Length = 524

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 191/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N++ E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 136 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 195 ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL KL                      S+L +  N L+ LP  +G   +L 
Sbjct: 255 LETIPDGIGKLKKL----------------------SILKVDQNRLTQLPEAVGDCESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 293 ELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 340 FCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTA 379



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPEA-VGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 156/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N++ E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQVADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L T+  
Sbjct: 223 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 261 GIGKLKKLSILKVDQNRL--TQLPEAVGDCESLT-----------ELVLTENQLLTLPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 308 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|313220970|emb|CBY31803.1| unnamed protein product [Oikopleura dioica]
          Length = 1092

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 163/348 (46%), Gaps = 36/348 (10%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILA 53
            K  R   S   ++  L  VP EVY++     E             ++++ V+L+KL L+
Sbjct: 12  FKCNRKVESFEKTHAFLASVPEEVYRHSRSLEELLLGSNNIKELPKQFFKLVNLKKLNLS 71

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N++  L +++  L  L  L++S N L  +P  I  L +L+S+D S N + +IP+ + + 
Sbjct: 72  DNDLSNLGQEISQLSKLVELDLSRNDLGRIPENIKMLALLESVDFSANPMTRIPETMVNL 131

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            +L     ++  L+  P + G    L   +A  N + +LPE + +   +  LD+  N++T
Sbjct: 132 ASLKHLKINAISLERFPENFGDLKTLETLEARENMVMTLPETICELPNLQYLDLGENEIT 191

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L        + L EL    N L  +PE+IG L  L   D  +N++  IP SIS C +++
Sbjct: 192 KLPEKF-GKLSNLLELWMDDNDLTSLPESIGGLVNLTLADFTKNKLEQIPDSISNCVNIS 250

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------YCVE---------------- 271
              +  N LS LP  +G L KL  L + +N+L E       CV                 
Sbjct: 251 VLTLKENYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQCVALTELILTENLIQVLPE 310

Query: 272 --ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
             AC  RL VL+L  N ++ LP +IGK   LR L L  N L  +  ++
Sbjct: 311 SVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENHLERIPETI 358



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 127/244 (52%), Gaps = 1/244 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L    N +  L E +  LP L  L++  N++++LP   G+L  L  L +  N +  +
Sbjct: 157 LETLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSL 216

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ IG    L   D + N+L+++P S+  C+N+S      N ++ LP  +    K+S+L 
Sbjct: 217 PESIGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHSIGSLKKLSELT 276

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ NKL  L+ + I     LTELI ++NL+  +PE++  L RL  L+L +NRI  +P  I
Sbjct: 277 VDNNKLCELTES-IGQCVALTELILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKI 335

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
             C +L   ++  N L  +P  +G L  L TLD+  N+L        QL +  + LS N 
Sbjct: 336 GKCKALRMLFLRENHLERIPETIGDLKNLQTLDVAGNRLDYLPDSLLQLDIKAVWLSANQ 395

Query: 287 LSGL 290
              L
Sbjct: 396 AQPL 399



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 141/315 (44%), Gaps = 39/315 (12%)

Query: 93  LKSLDVSFNSIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++S + +   +  +P+E+   + +L +    SN +KELP    + +NL     S+N +++
Sbjct: 18  VESFEKTHAFLASVPEEVYRHSRSLEELLLGSNNIKELPKQFFKLVNLKKLNLSDNDLSN 77

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           L ++++  SK+ +LD+                        S+N L  +PE I  L+ L  
Sbjct: 78  LGQEISQLSKLVELDL------------------------SRNDLGRIPENIKMLALLES 113

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           +D   N +  IP ++    SL    +   +L   P   G L  L TL+   N +      
Sbjct: 114 VDFSANPMTRIPETMVNLASLKHLKINAISLERFPENFGDLKTLETLEARENMVMTLPET 173

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            C+L  L  LDL  N ++ LP + GK++ L +L +  N L +L  S+       L  + +
Sbjct: 174 ICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLPESIGGLVNLTLADFTK 233

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           ++L +  DS         I+    +SV    L+L+   LS +P  I    ++++L +  N
Sbjct: 234 NKLEQIPDS---------ISNCVNISV----LTLKENYLSYLPHSIGSLKKLSELTVDNN 280

Query: 391 SIQELPPELSSCASL 405
            + EL   +  C +L
Sbjct: 281 KLCELTESIGQCVAL 295



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 67/136 (49%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V++  L L  N +  L   + +L  L+ L V +NKL EL  +IG+   L  L ++ N I 
Sbjct: 247 VNISVLTLKENYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQCVALTELILTENLIQ 306

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+ +     L   +   N++  LP  +G+C  L       N +  +PE + D   +  
Sbjct: 307 VLPESVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENHLERIPETIGDLKNLQT 366

Query: 165 LDVEGNKLTVLSNNLI 180
           LDV GN+L  L ++L+
Sbjct: 367 LDVAGNRLDYLPDSLL 382



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 50/91 (54%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V L +LIL  N I+ L E +  L  L VLN+  N+++ LP  IG+   L+ L +  N 
Sbjct: 291 QCVALTELILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENH 350

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           + +IP+ IG    L   D + N+L  LP SL
Sbjct: 351 LERIPETIGDLKNLQTLDVAGNRLDYLPDSL 381


>gi|421088197|ref|ZP_15549025.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003182|gb|EKO53628.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 354

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 161/313 (51%), Gaps = 19/313 (6%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAVDLQKLILAHNNIE 58
           + + L+ +     L+LS ++L   P E+  +KN               LQKL L+ N + 
Sbjct: 33  LTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKN---------------LQKLDLSGNELT 77

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
            L +++  L  L  L++  NKL+ LP  I +L  LK+LD+  N +M +P E+     L K
Sbjct: 78  VLSKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEK 137

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            + S N+L  +P  +G+  NL   K  +N I SLP+++    ++ +L +E N+   +   
Sbjct: 138 LNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGE 197

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            +     L +L  S+N L  +P+ I  L  L  L L  N+I  +P+ +    +L E Y+ 
Sbjct: 198 AL-QLKNLQKLNLSENQLVSIPKEILQLQNLRDLVLDHNQITILPTEVLQLQNLQELYLS 256

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
            N  ++LP E+ KL  L  L L +N+L     E  QL+ L  L+L NN L+ LP EIG++
Sbjct: 257 ENQFTSLPKEIDKLKNLRWLSLKNNRLSTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQL 316

Query: 298 TTLRKLLLTGNPL 310
             L++L L  NPL
Sbjct: 317 KNLQRLELDSNPL 329



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 145/315 (46%), Gaps = 38/315 (12%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+SF ++   P EIG    L K D S N+L  L   + +  NL +    +N +T+L
Sbjct: 43  VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+L  +   ++   T L +L  S N LN +P+ IG L  L  L
Sbjct: 103 PKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQT-LEKLNLSLNRLNAVPKEIGQLKNLQIL 161

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  N+I+S+P  I G   L E  + NN    +P E  +L  L  L+L  NQL     E 
Sbjct: 162 KLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEI 221

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  L L +N ++ LP E+ ++  L++L L+ N   +L   +        LK LR 
Sbjct: 222 LQLQNLRDLVLDHNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDK------LKNLRW 275

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                         LSL+   LS +P EI +   + +L+L  N 
Sbjct: 276 ------------------------------LSLKNNRLSTLPKEIGQLKNLQRLELGNNQ 305

Query: 392 IQELPPELSSCASLQ 406
           +  LP E+    +LQ
Sbjct: 306 LTNLPKEIGQLKNLQ 320



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 13/158 (8%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           L N   ++VP E               +  +LQKL L+ N +  + +++  L  L  L +
Sbjct: 186 LENNRFKNVPGEA-------------LQLKNLQKLNLSENQLVSIPKEILQLQNLRDLVL 232

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
            HN+++ LP  + +L  L+ L +S N    +P EI     L      +N+L  LP  +G+
Sbjct: 233 DHNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLSTLPKEIGQ 292

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             NL   +  NN +T+LP+++     + +L+++ N L+
Sbjct: 293 LKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPLS 330



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 14/158 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLS   L  +P E+              +  +L+ L+L HN I  L  ++  L  L  
Sbjct: 206 KLNLSENQLVSIPKEI-------------LQLQNLRDLVLDHNQITILPTEVLQLQNLQE 252

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S N+ + LP  I +L  L+ L +  N +  +P EIG    L + +  +NQL  LP  
Sbjct: 253 LYLSENQFTSLPKEIDKLKNLRWLSLKNNRLSTLPKEIGQLKNLQRLELGNNQLTNLPKE 312

Query: 133 LGRCLNLSDFKASNNCITSL-PEDLADCSKMSKLDVEG 169
           +G+  NL   +  +N ++S   E +       ++D EG
Sbjct: 313 IGQLKNLQRLELDSNPLSSKEKEKVVKLLPKCEIDFEG 350



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 15/132 (11%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPE 335
           + VLDLS  +L+  P EIG+   L+KL L+GN L  L   +V       L+ L+   L  
Sbjct: 43  VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQ------LQNLQELSLHS 96

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           N+ +      E L ++        K L L    L  +P E+     + KL+LS N +  +
Sbjct: 97  NKLTNLPKEIEQLKSL--------KNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAV 148

Query: 396 PPELSSCASLQV 407
           P E+    +LQ+
Sbjct: 149 PKEIGQLKNLQI 160


>gi|326916406|ref|XP_003204498.1| PREDICTED: hypothetical protein LOC100543557 [Meleagris gallopavo]
          Length = 1033

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L++ +N+L  LP  IG L  LK L +  N + +
Sbjct: 661 NLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAE 720

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E+G+   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    K+S L
Sbjct: 721 IPQEVGNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSIL 780

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ NKL  L+++ I     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 781 KVDQNKLIQLTDS-IGDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLISLPKE 839

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N LS +P+E+ + ++L  LD+  N+L         L+L  L LS+N
Sbjct: 840 IGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPFSLTTLKLKALWLSDN 899

Query: 286 S 286
            
Sbjct: 900 Q 900



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 141/276 (51%), Gaps = 8/276 (2%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +
Sbjct: 616 LQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYL 675

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +     L + D  +N+L  LP ++G   NL D     N +  +P+++ +   +  LD
Sbjct: 676 PESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLD 735

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  NKL  L    I   T LT+L+ S+NLL  +P+ IG L +L  L + QN+++ +  SI
Sbjct: 736 VSENKLECLPEE-INGLTSLTDLLVSQNLLQVLPDGIGKLRKLSILKVDQNKLIQLTDSI 794

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL----KEYCVEACQLRLSVLDL 282
             C SL E  +  N L  LP  +GKL KL  L+   N+L    KE  +  C   L+V  +
Sbjct: 795 GDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLISLPKE--IGGC-CSLNVFSV 851

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            +N LS +P EI + T L  L + GN L  L  SL 
Sbjct: 852 RDNRLSRIPSEISQATELHVLDVAGNRLTYLPFSLT 887



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 175/363 (48%), Gaps = 40/363 (11%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           +++ V L+KL L+ N I++L  ++ N   L  L++S N + E+P +I     L+  D S 
Sbjct: 564 FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSG 623

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + ++P+       L     +   L+ LP ++G   NL+  +   N +T LPE LA   
Sbjct: 624 NPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQ 683

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++ +LD+  N+L  L   + A +  L +L    N L  +P+ +G+L  L+ LD+ +N++ 
Sbjct: 684 RLEELDLGNNELYHLPETIGALFN-LKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLE 742

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLS 278
            +P  I+G  SL +  +  N L  LP  +GKL KL  L +  N+L +    +  C+  L+
Sbjct: 743 CLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSILKVDQNKLIQLTDSIGDCE-SLT 801

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            L L+ N L  LP  IGK+  L       N L   R+ L++ P                 
Sbjct: 802 ELVLTENQLQILPKSIGKLKKL-------NNLNADRNKLISLP----------------- 837

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                 KE  I     L+V     S+    LS IPSEI +A E+  LD++ N +  LP  
Sbjct: 838 ------KE--IGGCCSLNV----FSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPFS 885

Query: 399 LSS 401
           L++
Sbjct: 886 LTT 888



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 151/322 (46%), Gaps = 42/322 (13%)

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDFKASN 146
           +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C  L ++DF  S 
Sbjct: 566 QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADF--SG 623

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LPE             E   LT LS N I+              L  +PE IG+L
Sbjct: 624 NPLTRLPESFP----------ELQNLTCLSVNDIS--------------LQALPENIGNL 659

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  L+L +N +  +P S++    L E  +GNN L  LP  +G L  L  L L  NQL 
Sbjct: 660 YNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLA 719

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           E   E   L+ L  LD+S N L  LP EI  +T+L  LL++ N L+ L   +      ++
Sbjct: 720 EIPQEVGNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSI 779

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           LK  +++L +  DS                S+T  EL L    L  +P  I +  ++  L
Sbjct: 780 LKVDQNKLIQLTDSIGDCE-----------SLT--ELVLTENQLQILPKSIGKLKKLNNL 826

Query: 386 DLSRNSIQELPPELSSCASLQV 407
           +  RN +  LP E+  C SL V
Sbjct: 827 NADRNKLISLPKEIGGCCSLNV 848


>gi|428186142|gb|EKX54993.1| hypothetical protein GUITHDRAFT_62926 [Guillardia theta CCMP2712]
          Length = 495

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 203/447 (45%), Gaps = 76/447 (17%)

Query: 21  LRDVPNEV------YKNFDEA------GEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           LR  P E+      +  + EA      GEG+  +    LQ+++L HNNI+ L   +  +P
Sbjct: 3   LRQFPPELVTALSSFWEYSEARGVFLTGEGNLKY----LQEVVLDHNNIQILPAVISQMP 58

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  LN S N +  LPA++G L  LKSLD+S N ++ I +EI +   L +     N++ E
Sbjct: 59  CLESLNASANLIQTLPASVGNLISLKSLDLSKNGLVAIHEEISNLVNLEQLKLHENEITE 118

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN----------------KL 172
           +P  +    +L +F  S N +  LP  L   + +  L V  N                KL
Sbjct: 119 VPECISALQSLKEFSLSQNNLVQLPNSLPQLTGLKNLLVAKNNLSEIPDLIFKIQTLTKL 178

Query: 173 TVLSNNL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
            ++ N++      +   T LT+L+ + N L  +P+ IG L +L  L L +N I  +P SI
Sbjct: 179 ILVENHITKVPKELGLLTNLTDLVLTYNKLKTLPKEIGELWKLDYLVLDENMITELPDSI 238

Query: 227 SGCCSLAEFYMGNNALSALPAELG-------------------------KLSKLGTLDLH 261
               SL E    +N ++  P  LG                         KL++L  L+L+
Sbjct: 239 EHLTSLKELSFNDNRITRFPLSLGALTQLEILELSLSENRISRMHPALFKLTQLTILNLN 298

Query: 262 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
           SN+L++       L +L      +N +  +PPEI ++  LR+L+L GN +R +   L   
Sbjct: 299 SNRLQKIPESIRNLEQLVTFSCGSNFIEDIPPEICELDNLRQLVLFGNNIRHVCPELGGL 358

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
               +L   +++L           K+ L T+        KEL L   +L +IPS I    
Sbjct: 359 TGLEVLSLSQNQL-------TDIPKQMLKTLTNL-----KELWLAFNHLHSIPSSIGYLK 406

Query: 381 EITKLDLSRNSIQELPPELSSCASLQV 407
            + +L L  N ++ LPP++ S  +L V
Sbjct: 407 HLEQLWLQDNELESLPPQIGSLKNLNV 433



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 38/264 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+   L+ +P E+         G+ W     L  L+L  N I +L + + +L  L  L
Sbjct: 201 LVLTYNKLKTLPKEI---------GELW----KLDYLVLDENMITELPDSIEHLTSLKEL 247

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSF-------------------------NSIMKIPD 108
           + + N+++  P ++G L  L+ L++S                          N + KIP+
Sbjct: 248 SFNDNRITRFPLSLGALTQLEILELSLSENRISRMHPALFKLTQLTILNLNSNRLQKIPE 307

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
            I +   LV F C SN ++++P  +    NL       N I  +  +L   + +  L + 
Sbjct: 308 SIRNLEQLVTFSCGSNFIEDIPPEICELDNLRQLVLFGNNIRHVCPELGGLTGLEVLSLS 367

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+LT +   ++ + T L EL  + N L+ +P +IG L  L +L L  N + S+P  I  
Sbjct: 368 QNQLTDIPKQMLKTLTNLKELWLAFNHLHSIPSSIGYLKHLEQLWLQDNELESLPPQIGS 427

Query: 229 CCSLAEFYMGNNALSALPAELGKL 252
             +L    +  N +S LP  L +L
Sbjct: 428 LKNLNVLTLTGNRISELPDSLKRL 451


>gi|388452646|ref|NP_001253435.1| leucine-rich repeat-containing protein 1 [Macaca mulatta]
 gi|380784439|gb|AFE64095.1| leucine-rich repeat-containing protein 1 [Macaca mulatta]
          Length = 524

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 191/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N++ E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 136 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 195 ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL KL                      S+L +  N L+ LP  +G   +L 
Sbjct: 255 LETIPDGIGKLKKL----------------------SILKVDQNRLTQLPEAVGDCESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 293 ELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 340 FCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTA 379



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPEA-VGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 156/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N++ E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQVADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L T+  
Sbjct: 223 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 261 GIGKLKKLSILKVDQNRL--TQLPEAVGDCESLT-----------ELVLTENQLLTLPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 308 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|418668210|ref|ZP_13229613.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756067|gb|EKR17694.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 379

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 150/309 (48%), Gaps = 12/309 (3%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +L+LS    + +P E+   KN  E          +        +L+KL L+ N I+ + +
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L + +N+L+ LP  IG+L  L+ L +  N +  +P EIG    L   + S
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 171

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQ+K +P  + +   L      NN +T+LP+++     +  LD+  N+LT L    I  
Sbjct: 172 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE-IGH 230

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L +L    N L  +P  I  L  L  L+L  NR+ ++   I    +L    + +N L
Sbjct: 231 LQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 290

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P  +G+L  L  LDL SNQL        QL+ L  LDL +N L+ LP EIG++  L+
Sbjct: 291 TTFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQ 350

Query: 302 KLLLTGNPL 310
           +L L  N L
Sbjct: 351 ELFLNNNQL 359



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 136/277 (49%), Gaps = 15/277 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLS   ++ +P E+ K                LQ L L +N +  L +++  L  L  
Sbjct: 98  KLNLSANQIKTIPKEIEK-------------LQKLQSLYLPNNQLTTLPQEIGQLQKLQW 144

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ LP  IG+L  LKSL++S+N I  IP EI     L      +NQL  LP  
Sbjct: 145 LYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE 204

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL     S N +T+LP+++     +  L +  N+LT+L N  I     L  L   
Sbjct: 205 IGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNE-IRQLKNLQTLNLR 263

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  + + I  L  L  LDL  N++ + P  I    +L    +G+N L+ LP  +G+L
Sbjct: 264 NNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQL 323

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
             L TLDL SNQL     E  QL+ L  L L+NN LS
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLS 360



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 135/263 (51%), Gaps = 2/263 (0%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++S N I  IP EI 
Sbjct: 55  LSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIE 114

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
               L      +NQL  LP  +G+   L       N +T+LP+++     +  L++  N+
Sbjct: 115 KLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQ 174

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +  +    I     L  L    N L  +P+ IG L  L  LDL  NR+ ++P  I    +
Sbjct: 175 IKTIPKE-IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQN 233

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L + Y+ +N L+ LP E+ +L  L TL+L +N+L     E  QL+ L  LDL +N L+  
Sbjct: 234 LQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTF 293

Query: 291 PPEIGKMTTLRKLLLTGNPLRTL 313
           P  IG++  L+ L L  N L TL
Sbjct: 294 PKGIGQLKNLQVLDLGSNQLTTL 316



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 164/355 (46%), Gaps = 22/355 (6%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           ++L  A+     +++LD+S N    +P EIG    L + + + NQL  LP  +G+  NL 
Sbjct: 38  TDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 97

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               S N I ++P+++    K+  L +  N+LT L    I     L  L   KN L  +P
Sbjct: 98  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQE-IGQLQKLQWLYLPKNQLTTLP 156

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L  L  L+L  N+I +IP  I     L    + NN L+ LP E+G+L  L +LDL
Sbjct: 157 QEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDL 216

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +N+L     E   L+ L  L L +N L+ LP EI ++  L+ L L  N L TL   +  
Sbjct: 217 STNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQ 276

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                 LK L  R      S   TT    I     L V    L L    L+ +P  I + 
Sbjct: 277 LQN---LKSLDLR------SNQLTTFPKGIGQLKNLQV----LDLGSNQLTTLPEGIGQL 323

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKF--SDLVTNKE-----SCISGCYLYW 427
             +  LDL  N +  LP E+    +LQ  F  ++ ++++E       I  C +Y+
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSSQEKKRIRKLIPKCQIYF 378



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 1/199 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + +++  L  L  L + +N+L+ LP  IG+L  L+SLD+S N +  
Sbjct: 164 NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTT 223

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L      SNQL  LP+ + +  NL      NN +T+L +++     +  L
Sbjct: 224 LPQEIGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 283

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+LT      I     L  L    N L  +PE IG L  L  LDL  N++ ++P  
Sbjct: 284 DLRSNQLTTFPKG-IGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQE 342

Query: 226 ISGCCSLAEFYMGNNALSA 244
           I    +L E ++ NN LS+
Sbjct: 343 IGQLQNLQELFLNNNQLSS 361


>gi|444709489|gb|ELW50501.1| Leucine-rich repeat protein SHOC-2 [Tupaia chinensis]
          Length = 535

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 161/300 (53%), Gaps = 20/300 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NLP L +L
Sbjct: 173 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLPKLIML 219

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IGEL  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 220 SIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 279

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +L+      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 280 GNLCSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 339

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 340 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 397

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L  L L+NN L+ LP  IG +T L  L L  N
Sbjct: 398 GTWTSMVELNLATNQLTKIPEDVSGLISLEKLVLTNNQLTTLPRGIGHLTNLTHLGLGEN 457



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 178/366 (48%), Gaps = 41/366 (11%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L  L L+ N++  L + L NL  L +L++ HNKL E+P+ +  L  L +L + FN I 
Sbjct: 145 VNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRIT 204

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +  +I +   L+      N++K+LP+ +G   NL     ++N +  LP+++ +C++++ 
Sbjct: 205 TVEKDIKNLPKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITN 264

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L                          +P+TIG+L  L RL L  NR+ +IP 
Sbjct: 265 LDLQHNELL------------------------DLPDTIGNLCSLNRLGLRYNRLSAIPR 300

Query: 225 SISGCCSLAEFYMGNNALSALPAE-LGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LD 281
           S++ C +L E  + NN +S LP   L  L KL +L L  N  + Y V       ++  L+
Sbjct: 301 SLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLN 360

Query: 282 LSNNSLSGLPPEI-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           + +N ++ +P  I  +   L KL +  N L +L   L  G   ++++     L  N+ ++
Sbjct: 361 MEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSL--PLDFGTWTSMVEL---NLATNQLTK 415

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                  LI++        ++L L    L+ +P  I     +T L L  N +  LP E+ 
Sbjct: 416 IPEDVSGLISL--------EKLVLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIG 467

Query: 401 SCASLQ 406
           +  +L+
Sbjct: 468 TLENLE 473



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LP+S+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 102 MRLDLSKRSIHILPTSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 161

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L    
Sbjct: 162 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLPKLIMLS 220

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G+L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 221 IRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 280

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            + +L +L L  N L  +  SL 
Sbjct: 281 NLCSLNRLGLRYNRLSAIPRSLA 303



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 14/197 (7%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +P+SI     L E Y+ +N L +LPAE+G L  L TL L  N L    
Sbjct: 102 MRLDLSKRSIHILPTSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 161

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L +L +LDL +N L  +P  + ++ +L  L L  N + T+   + N P     K 
Sbjct: 162 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLP-----KL 216

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           +   + EN+  +      +L  + T        L +    L  +P EI    +IT LDL 
Sbjct: 217 IMLSIRENKIKQLPAEIGELCNLIT--------LDVAHNQLEHLPKEIGNCTQITNLDLQ 268

Query: 389 RNSIQELPPELSSCASL 405
            N + +LP  + +  SL
Sbjct: 269 HNELLDLPDTIGNLCSL 285


>gi|410959449|ref|XP_003986321.1| PREDICTED: leucine-rich repeat-containing protein 1 [Felis catus]
          Length = 544

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 190/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 49  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 95

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++P+       L     
Sbjct: 96  PEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSV 155

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 156 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 214

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 215 ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 274

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL KL                      S+L +  N L+ LP  +G   +L 
Sbjct: 275 LEMIPDGIGKLKKL----------------------SILKVDQNRLTQLPEAVGDCESLT 312

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 313 ELVLTENRLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 359

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 360 FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTA 399



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 172 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 231

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N +  +P+ +    K+S L
Sbjct: 232 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSIL 291

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 292 KVDQNRLTQLPEA-VGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 350

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 351 IGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 410

Query: 286 S 286
            
Sbjct: 411 Q 411



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 154/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 66  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 125

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 126 ALQIADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 182

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 183 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 242

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L  +  
Sbjct: 243 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPD 280

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 281 GIGKLKKLSILKVDQNRL--TQLPEAVGDCESLT-----------ELVLTENRLLTLPKS 327

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 328 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 359



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 58  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 117

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 118 PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 177

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 178 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 224

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 225 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 272


>gi|455789995|gb|EMF41891.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 595

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 177/395 (44%), Gaps = 47/395 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTVLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     S N +T+LP+++     +  LD++ N+ T L                  
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTL------------------ 201

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+ IG L  L  L+L  N++ ++P  I    +L E Y+ NN L+  P E+G+L 
Sbjct: 202 ------PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQ 255

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L    N+L     E  QL+ L  L+L NN L+  P EIG++  L+ L L  NPL  
Sbjct: 256 NLQMLGSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSL 315

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS-A 371
                +    P       S L   E +E    +   + +A    +   ELSLE  + S +
Sbjct: 316 KERKRIQKLFPD------SNLDLREVAENGVYRN--LNLAQEEPLKVFELSLEYKDFSQS 367

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            P  I +   +  L+L       LP E+S   +L+
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLK 402



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 163/390 (41%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLGSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    +              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLTAEIGQLQ------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 563



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 133/294 (45%), Gaps = 43/294 (14%)

Query: 17  SNRSLRDVP-NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIE----KLKEDLRNLPLLT 71
           SN  LR+V  N VY+N + A E     E + + +L L + +      K+    RNL    
Sbjct: 328 SNLDLREVAENGVYRNLNLAQE-----EPLKVFELSLEYKDFSQSFPKVILKFRNL---R 379

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            LN+     S LP  I  L  LK L +  N +  IP EIG    L   +  +N+L+ LP 
Sbjct: 380 GLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPK 439

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 440 EIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 482

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++ + I    +L E  + +N  + LP E+GK
Sbjct: 483 -------FPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGK 535

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           L KL TLDL +NQL     E  QL+ L  L L NN LS     + +   +RKLL
Sbjct: 536 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS-----LKEQERIRKLL 584



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 136/297 (45%), Gaps = 33/297 (11%)

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           +  +   ++L  +L   LN+     S   +T+LP+++     + +L+++ N LTVL    
Sbjct: 31  EVEAGTYRDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKE- 89

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L EL    N L   P  I  L +L  LDL +NR++ +P+ I    +L +  +  
Sbjct: 90  IGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYK 149

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L+  P E+G+L  L  L L  N+L     E  QL+ L  LDL +N  + LP EIG++ 
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQ 209

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L+ L L  N L TL         P  +  L++              ++L     RL+V 
Sbjct: 210 NLQTLNLQDNQLATL---------PVEIGQLQNL-------------QELYLRNNRLTVF 247

Query: 359 SKEL-SLEGMN--------LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            KE+  L+ +         L+A+P E+ +   +  L+L  N +   P E+    +LQ
Sbjct: 248 PKEIGQLQNLQMLGSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQ 304



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 98/228 (42%), Gaps = 23/228 (10%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
            P  I +   L+ L++       +P EI     L       N LK +PS +G+  NL   
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 427

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
               N +  LP+++     + KL +  N L +     I     L +L  S N     P+ 
Sbjct: 428 NLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKE 486

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L+L +N++ ++ + I    +L E  + +N  + LP E+GKL KL TLDL  
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLR- 545

Query: 263 NQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
                                NN L+ LP EIG++  L+ L L  N L
Sbjct: 546 ---------------------NNQLTTLPTEIGQLQNLQWLYLQNNQL 572


>gi|421088183|ref|ZP_15549011.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003168|gb|EKO53614.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 305

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 140/283 (49%), Gaps = 28/283 (9%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
            YK+  +A +       +D++ L L+   +  L +++  L  L  LN+ +N+ + LP  I
Sbjct: 32  TYKDLTKALKN-----PLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEI 86

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           G+L  L+ L +  N +  +P E+G    L  F+ ++NQL  LP+ +G+  NL      NN
Sbjct: 87  GQLQSLRELYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNN 146

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            +T+LP+++     +  L +  NKLT L          L  L  SKNLL  +P  IG L 
Sbjct: 147 QLTTLPKEVGQLKNLYDLSLHDNKLTTLPKE-TGQLKNLRMLNLSKNLLTILPNEIGQLK 205

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           +L+ L+L  N++ ++P  I    SL E Y+G+N L  LP E+G+L  L  L L   Q   
Sbjct: 206 KLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEIGQLKNLRELLLRHKQ--- 262

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
                              L+ +P EIG++  LR LLL  NP+
Sbjct: 263 -------------------LTTVPKEIGQLKKLRWLLLDANPI 286



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 124/243 (51%), Gaps = 25/243 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  IG+L  L++L++  N    +P+EIG   +L +     NQL  LP 
Sbjct: 48  VLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPK 107

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL  F+ +NN +T+LP ++     +  LD+  N+LT L                
Sbjct: 108 EVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTL---------------- 151

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ +G L  L  L LH N++ ++P       +L    +  N L+ LP E+G+
Sbjct: 152 --------PKEVGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTILPNEIGQ 203

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL +L+L  NQL     E  QL+ L  L L +N L  LP EIG++  LR+LLL    L
Sbjct: 204 LKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEIGQLKNLRELLLRHKQL 263

Query: 311 RTL 313
            T+
Sbjct: 264 TTV 266



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 134/281 (47%), Gaps = 19/281 (6%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           K+L  +L   L++     S   +T LP+++     +  L++  N+ T L N  I     L
Sbjct: 34  KDLTKALKNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNE-IGQLQSL 92

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
            EL    N L  +P+ +G L  L   +L+ N++ ++P+ I    +L    + NN L+ LP
Sbjct: 93  RELYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLP 152

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+G+L  L  L LH N+L     E  QL+ L +L+LS N L+ LP EIG++  L  L L
Sbjct: 153 KEVGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNL 212

Query: 306 TGNPLRTLRSSLVNGPTPALLK-YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           T N L TL   +  G   +L + YL        D++  T  +++  +        +EL L
Sbjct: 213 TYNQLTTLPKEI--GQLQSLRELYL-------GDNQLKTLPKEIGQLK-----NLRELLL 258

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
               L+ +P EI +  ++  L L  N I  LP EL      
Sbjct: 259 RHKQLTTVPKEIGQLKKLRWLLLDANPI--LPKELKRIQKF 297



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 18/218 (8%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           SK  L  +P+ IG L  L  L+L  N+  ++P+ I    SL E Y+G+N L+ LP E+G+
Sbjct: 52  SKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPKEVGQ 111

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L   +L++NQL     E  +L+ L  LDL NN L+ LP E+G++  L  L L  N L
Sbjct: 112 LKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHDNKL 171

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM--N 368
            TL            LK LR           + +K  L  +   +    K LSL      
Sbjct: 172 TTLPKE------TGQLKNLRM---------LNLSKNLLTILPNEIGQLKKLLSLNLTYNQ 216

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L+ +P EI +   + +L L  N ++ LP E+    +L+
Sbjct: 217 LTTLPKEIGQLQSLRELYLGDNQLKTLPKEIGQLKNLR 254



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 37/172 (21%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           +    L+ LP E+G+L  L TL+L +NQ      E  QL+ L  L L +N L+ LP E+G
Sbjct: 51  LSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPKEVG 110

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           ++  L+   L  N L TL         PA +  L++                        
Sbjct: 111 QLKNLQVFELNNNQLTTL---------PAEIGKLKN------------------------ 137

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
               + L L    L+ +P E+ +   +  L L  N +  LP E     +L++
Sbjct: 138 ---LQHLDLWNNQLTTLPKEVGQLKNLYDLSLHDNKLTTLPKETGQLKNLRM 186


>gi|86264151|gb|ABC87809.1| leucine-rich repeat protein [Penaeus monodon]
          Length = 561

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 191/400 (47%), Gaps = 34/400 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P+ VYK                L  L L  N I  + ED+RNL  L  L
Sbjct: 154 LDLRHNKLCEIPDVVYK-------------LTSLITLYLRFNRIRVVGEDIRNLKNLITL 200

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ + PA IGEL  L +LD + N    + +EIG+   L       N+L +LP S+
Sbjct: 201 SLRGNKIRQPPAGIGELTGLATLDAAHNHSEHLSEEIGNCMCLQTLHLQHNELLDLPQSI 260

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL+      N +T++P  L+ C  + + +VEGN+++ L   L++S + L+ L  S+
Sbjct: 261 GYLRNLTCLGLKYNRLTAVPRSLSKCIHLDEFNVEGNQISQLPEGLLSSLSNLSSLTLSR 320

Query: 194 NLLNGMPETIGSLSRLIR---LDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N  N  P  +G  S+      ++L  N++  IP  I S    L +  M  N L++LP ++
Sbjct: 321 NAFNSYP--VGGPSQFTNVHSINLEHNQVDRIPYGIFSRARHLTKLNMNYNGLTSLPLDI 378

Query: 250 GKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G    +  L+L +N L +   + +C   L VL LSNN+L  +P  IG +  LR L L  N
Sbjct: 379 GSWQNMVELNLGTNHLTKVPDDISCLQSLEVLILSNNNLRKIPSSIGNLRKLRVLDLEEN 438

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L  L       P    LK L+  + ++    A       +   T LSV          N
Sbjct: 439 RLEGL------PPEIGFLKDLQRLIVQSNQLSALPRALGHLVNLTYLSVGEN-------N 485

Query: 369 LSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           LS +P EI     +  L ++ N  +  LP EL+ C +LQ+
Sbjct: 486 LSYLPEEIGTLESLETLYINDNPQLHNLPFELALCTNLQI 525



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 86/198 (43%), Gaps = 37/198 (18%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL  + I  IPSS+     L EFY+ +N L+ LP E+G L  L TL L  N L    
Sbjct: 83  LRLDLSNSSISQIPSSVHNLTHLVEFYLYSNKLTTLPPEIGCLVNLQTLGLSENSLTSLP 142

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L +L VLDL +N L  +P  + K+T+L  L L  N +R +   + N         
Sbjct: 143 DTLANLEKLRVLDLRHNKLCEIPDVVYKLTSLITLYLRFNRIRVVGEDIRN--------- 193

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
                            ++LIT           LSL G  +   P+ I E   +  LD +
Sbjct: 194 ----------------LKNLIT-----------LSLRGNKIRQPPAGIGELTGLATLDAA 226

Query: 389 RNSIQELPPELSSCASLQ 406
            N  + L  E+ +C  LQ
Sbjct: 227 HNHSEHLSEEIGNCMCLQ 244



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 139/332 (41%), Gaps = 46/332 (13%)

Query: 117 VKFDCSSNQLKELPSS-----------------------LGRCLNLSDFKASNNCITSLP 153
           ++ D S++ + ++PSS                       +G  +NL     S N +TSLP
Sbjct: 83  LRLDLSNSSISQIPSSVHNLTHLVEFYLYSNKLTTLPPEIGCLVNLQTLGLSENSLTSLP 142

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           + LA+  K+  LD+  NKL  +  +++   T L  L    N +  + E I +L  LI L 
Sbjct: 143 DTLANLEKLRVLDLRHNKLCEIP-DVVYKLTSLITLYLRFNRIRVVGEDIRNLKNLITLS 201

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L  N+I   P+ I     LA     +N    L  E+G    L TL L  N+L +      
Sbjct: 202 LRGNKIRQPPAGIGELTGLATLDAAHNHSEHLSEEIGNCMCLQTLHLQHNELLDLPQSIG 261

Query: 274 QLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL-----------------RS 315
            LR L+ L L  N L+ +P  + K   L +  + GN +  L                 R+
Sbjct: 262 YLRNLTCLGLKYNRLTAVPRSLSKCIHLDEFNVEGNQISQLPEGLLSSLSNLSSLTLSRN 321

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
           +  + P     ++        E ++       + + A  L+    +L++    L+++P +
Sbjct: 322 AFNSYPVGGPSQFTNVHSINLEHNQVDRIPYGIFSRARHLT----KLNMNYNGLTSLPLD 377

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I     + +L+L  N + ++P ++S   SL+V
Sbjct: 378 IGSWQNMVELNLGTNHLTKVPDDISCLQSLEV 409


>gi|313227075|emb|CBY22222.1| unnamed protein product [Oikopleura dioica]
          Length = 1092

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 163/348 (46%), Gaps = 36/348 (10%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILA 53
            K  R   S   ++  L  VP EVY++     E             ++++ V+L+KL L+
Sbjct: 12  FKCNRKVESFEKTHAFLASVPEEVYRHSRSLEELLLGSNNIKELPKQFFKLVNLKKLNLS 71

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N++  L +++  L  L  L++S N L  +P  I  L +L+S+D S N + +IP+ + + 
Sbjct: 72  DNDLSNLGQEISQLSKLVELDLSRNDLGRIPENIKMLALLESVDFSANPMTRIPETMVNL 131

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            +L     ++  L+  P + G    L   +A  N + +LPE + +   +  LD+  N++T
Sbjct: 132 ASLKHLKINAISLERFPENFGDLKTLETLEARENMVMTLPETICELPNLQYLDLGENEIT 191

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L        + L EL    N L  +PE+IG L  L   D  +N++  IP SIS C +++
Sbjct: 192 KLPEKF-GKLSNLLELWMDDNDLTSLPESIGGLVNLTLADFTKNKLEQIPDSISNCVNIS 250

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE------YCVE---------------- 271
              +  N LS LP  +G L KL  L + +N+L E       CV                 
Sbjct: 251 VLTLKENYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQCVALTELILTENLIQVLPE 310

Query: 272 --ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
             AC  RL VL+L  N ++ LP +IGK   LR L L  N L  +  ++
Sbjct: 311 SVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENHLERIPETI 358



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 127/244 (52%), Gaps = 1/244 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L    N +  L E +  LP L  L++  N++++LP   G+L  L  L +  N +  +
Sbjct: 157 LETLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSL 216

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ IG    L   D + N+L+++P S+  C+N+S      N ++ LP  +    K+S+L 
Sbjct: 217 PESIGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHSIGSLKKLSELT 276

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ NKL  L+ + I     LTELI ++NL+  +PE++  L RL  L+L +NRI  +P  I
Sbjct: 277 VDNNKLCELTES-IGQCVALTELILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKI 335

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
             C +L   ++  N L  +P  +G L  L TLD+  N+L        QL +  + LS N 
Sbjct: 336 GKCKALRMLFLRENHLERIPETIGDLKNLQTLDVAGNRLDYLPDSLLQLDIKAVWLSANQ 395

Query: 287 LSGL 290
              L
Sbjct: 396 AQPL 399



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 141/315 (44%), Gaps = 39/315 (12%)

Query: 93  LKSLDVSFNSIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++S + +   +  +P+E+   + +L +    SN +KELP    + +NL     S+N +++
Sbjct: 18  VESFEKTHAFLASVPEEVYRHSRSLEELLLGSNNIKELPKQFFKLVNLKKLNLSDNDLSN 77

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           L ++++  SK+ +LD+                        S+N L  +PE I  L+ L  
Sbjct: 78  LGQEISQLSKLVELDL------------------------SRNDLGRIPENIKMLALLES 113

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           +D   N +  IP ++    SL    +   +L   P   G L  L TL+   N +      
Sbjct: 114 VDFSANPMTRIPETMVNLASLKHLKINAISLERFPENFGDLKTLETLEARENMVMTLPET 173

Query: 272 ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            C+L  L  LDL  N ++ LP + GK++ L +L +  N L +L  S+       L  + +
Sbjct: 174 ICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLPESIGGLVNLTLADFTK 233

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           ++L +  DS         I+    +SV    L+L+   LS +P  I    ++++L +  N
Sbjct: 234 NKLEQIPDS---------ISNCVNISV----LTLKENYLSYLPHSIGSLKKLSELTVDNN 280

Query: 391 SIQELPPELSSCASL 405
            + EL   +  C +L
Sbjct: 281 KLCELTESIGQCVAL 295



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 67/136 (49%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V++  L L  N +  L   + +L  L+ L V +NKL EL  +IG+   L  L ++ N I 
Sbjct: 247 VNISVLTLKENYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQCVALTELILTENLIQ 306

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+ +     L   +   N++  LP  +G+C  L       N +  +PE + D   +  
Sbjct: 307 VLPESVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENHLERIPETIGDLKNLQT 366

Query: 165 LDVEGNKLTVLSNNLI 180
           LDV GN+L  L ++L+
Sbjct: 367 LDVAGNRLDYLPDSLL 382



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 50/91 (54%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V L +LIL  N I+ L E +  L  L VLN+  N+++ LP  IG+   L+ L +  N 
Sbjct: 291 QCVALTELILTENLIQVLPESVACLCRLGVLNLGRNRITHLPEKIGKCKALRMLFLRENH 350

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           + +IP+ IG    L   D + N+L  LP SL
Sbjct: 351 LERIPETIGDLKNLQTLDVAGNRLDYLPDSL 381


>gi|298250400|ref|ZP_06974204.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297548404|gb|EFH82271.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 384

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 138/271 (50%), Gaps = 2/271 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+ L +  N +  L   L +LP L  L +  N+L+ LPA IG L  L+   V  N + 
Sbjct: 75  VNLRALHVDMNRLSVLPSSLYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLT 134

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+ +     L   + + NQL  L   +G+   L    A +N +T+LPE L   + ++ 
Sbjct: 135 SLPESLWELGRLQALNLAENQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLTNLTH 194

Query: 165 -LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            L +  N+LT LS +L A  T L  L  + N L  +P ++G L+ L  L ++ N++ ++P
Sbjct: 195 YLYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLP 254

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
             +    +L E +  NN L  LP  LGKL +L  L L +N+L        +L  L+ LDL
Sbjct: 255 EELGNLAALRELHAMNNRLETLPDSLGKLKQLRELRLANNRLARLPTYLGELANLTSLDL 314

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            NN L+ LP  +  +  LR L L  N L TL
Sbjct: 315 RNNLLASLPASLDNLAKLRALDLRANRLTTL 345



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 160/341 (46%), Gaps = 23/341 (6%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL+++ N+L+ LP  +G L  L+ L +  N I  +P  +G    L       N+L  LPS
Sbjct: 33  VLDLTGNRLTALPEELGSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLPS 92

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTEL 189
           SL     L   +   N +T+LP D+     +    V  N+LT L  +L   W +  L  L
Sbjct: 93  SLYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSLPESL---WELGRLQAL 149

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF-YMGNNALSALPAE 248
             ++N L+ + E IG L++L  LD   N++ ++P S+    +L  + Y+ NN L+ L   
Sbjct: 150 NLAENQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLTNLTHYLYLSNNRLTTLSES 209

Query: 249 L-GKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           L   L++L  L++  NQL E      C   L  L + NN L+ LP E+G +  LR+L   
Sbjct: 210 LFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLPEELGNLAALRELHAM 269

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
            N L TL  SL        LK LR  RL  N  +   T   +L  + +        L L 
Sbjct: 270 NNRLETLPDSL------GKLKQLRELRLANNRLARLPTYLGELANLTS--------LDLR 315

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              L+++P+ +    ++  LDL  N +  LPP L     L+
Sbjct: 316 NNLLASLPASLDNLAKLRALDLRANRLTTLPPGLQRLQHLE 356



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 115/221 (52%), Gaps = 3/221 (1%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSF 100
           WE   LQ L LA N +  L E +  L  L +L+  HN+L+ LP ++G+L ++   L +S 
Sbjct: 141 WELGRLQALNLAENQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLTNLTHYLYLSN 200

Query: 101 NSIMKIPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           N +  + + +    T L   + + NQL ELP SLG   NL + +  NN + +LPE+L + 
Sbjct: 201 NRLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLPEELGNL 260

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           + + +L    N+L  L ++L      L EL  + N L  +P  +G L+ L  LDL  N +
Sbjct: 261 AALRELHAMNNRLETLPDSL-GKLKQLRELRLANNRLARLPTYLGELANLTSLDLRNNLL 319

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
            S+P+S+     L    +  N L+ LP  L +L  L  LDL
Sbjct: 320 ASLPASLDNLAKLRALDLRANRLTTLPPGLQRLQHLEKLDL 360



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 156/330 (47%), Gaps = 19/330 (5%)

Query: 94  KSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLP 153
           + LD++ N +  +P+E+GS   L +     NQ+  LP  LG+ +NL       N ++ LP
Sbjct: 32  RVLDLTGNRLTALPEELGSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLP 91

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
             L    ++  L +  N+LT L  + I     L +    KN L  +PE++  L RL  L+
Sbjct: 92  SSLYHLPRLETLRLYKNRLTNLPAD-IGRLQGLRDFSVGKNQLTSLPESLWELGRLQALN 150

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL-GTLDLHSNQLKEY--CV 270
           L +N++ S+   I     L     G+N L+ LP  LG+L+ L   L L +N+L      +
Sbjct: 151 LAENQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLTNLTHYLYLSNNRLTTLSESL 210

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
            A   +L+ L++++N L+ LP  +G +T L++L +  N L TL   L N      L  + 
Sbjct: 211 FAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLPEELGNLAALRELHAMN 270

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +RL    DS     +              +EL L    L+ +P+ + E   +T LDL  N
Sbjct: 271 NRLETLPDSLGKLKQ-------------LRELRLANNRLARLPTYLGELANLTSLDLRNN 317

Query: 391 SIQELPPELSSCASLQVKFSDLVTNKESCI 420
            +  LP  L + A L+    DL  N+ + +
Sbjct: 318 LLASLPASLDNLAKLRAL--DLRANRLTTL 345



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 108/208 (51%), Gaps = 25/208 (12%)

Query: 50  LILAHNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           L L++N +  L E L  +L  L  LN++ N+L+ELP ++G L  LK L +  N +  +P+
Sbjct: 196 LYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLPE 255

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           E+G+  AL +    +N+L+ LP SLG+   L + + +NN +  LP  L + + ++ LD  
Sbjct: 256 ELGNLAALRELHAMNNRLETLPDSLGKLKQLRELRLANNRLARLPTYLGELANLTSLD-- 313

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
                 L NNL+AS                +P ++ +L++L  LDL  NR+ ++P  +  
Sbjct: 314 ------LRNNLLAS----------------LPASLDNLAKLRALDLRANRLTTLPPGLQR 351

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLG 256
              L +  +    LS LP  L +L + G
Sbjct: 352 LQHLEKLDLRWLKLSPLPTWLDQLEQRG 379



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 68/131 (51%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L++L + +N +  L E+L NL  L  L+  +N+L  LP ++G+L  L+ L ++ N + 
Sbjct: 238 TNLKELRIYNNQLATLPEELGNLAALRELHAMNNRLETLPDSLGKLKQLRELRLANNRLA 297

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P  +G    L   D  +N L  LP+SL     L       N +T+LP  L     + K
Sbjct: 298 RLPTYLGELANLTSLDLRNNLLASLPASLDNLAKLRALDLRANRLTTLPPGLQRLQHLEK 357

Query: 165 LDVEGNKLTVL 175
           LD+   KL+ L
Sbjct: 358 LDLRWLKLSPL 368



 Score = 41.2 bits (95), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
            L++L LA+N + +L   L  L  LT L++ +N L+ LPA++  L  L++LD+  N +  
Sbjct: 285 QLRELRLANNRLARLPTYLGELANLTSLDLRNNLLASLPASLDNLAKLRALDLRANRLTT 344

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSL 133
           +P  +     L K D    +L  LP+ L
Sbjct: 345 LPPGLQRLQHLEKLDLRWLKLSPLPTWL 372


>gi|322510677|gb|ADX05991.1| leucine-rich repeat-containing protein [Organic Lake phycodnavirus
           1]
          Length = 707

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 141/274 (51%), Gaps = 2/274 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           + L+KL L +N ++ L E +  L  L +L++ +NK+  LP +IG L  L+SL +  N + 
Sbjct: 42  IQLKKLYLDNNQLDTLSEIISELDNLQILSLKNNKIVSLPDSIGNLTKLRSLTMGDNKLF 101

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+ IG+   L   D  SN L  LP S+G    LS     +N +  LPE + + S ++ 
Sbjct: 102 LLPESIGNLIHLENLDIRSNILTRLPESIGELKKLSFLILDDNNLNELPETIVNLSNLTN 161

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  NK+T +  N I     +  ++ + N L+ +PE+ G+L +L +L L  N ++++P 
Sbjct: 162 LSLRNNKITTIPEN-IGQLVKIKNMLLNNNQLSSLPESFGNLVKLEKLFLTYNMLVTLPK 220

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
           S     ++    + NN L  +P  +G L+ L  + L  N+L       C L  L  L + 
Sbjct: 221 SFDNLINIKILELNNNRLIQIPENIGSLTLLEKISLQDNKLTMLPESMCNLTLLKSLIIM 280

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           NN L+ LP  IGK+  L  L L  N L  L  S+
Sbjct: 281 NNQLTTLPARIGKLNNLENLFLENNLLTALPESI 314



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 122/223 (54%), Gaps = 1/223 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L  LIL  NN+ +L E + NL  LT L++ +NK++ +P  IG+L  +K++ ++ N 
Sbjct: 132 ELKKLSFLILDDNNLNELPETIVNLSNLTNLSLRNNKITTIPENIGQLVKIKNMLLNNNQ 191

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P+  G+   L K   + N L  LP S    +N+   + +NN +  +PE++   + +
Sbjct: 192 LSSLPESFGNLVKLEKLFLTYNMLVTLPKSFDNLINIKILELNNNRLIQIPENIGSLTLL 251

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            K+ ++ NKLT+L  ++  + T+L  LI   N L  +P  IG L+ L  L L  N + ++
Sbjct: 252 EKISLQDNKLTMLPESM-CNLTLLKSLIIMNNQLTTLPARIGKLNNLENLFLENNLLTAL 310

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           P SI     ++   + NN L+ LP +   L+ L TL L +NQL
Sbjct: 311 PESIGDLRKISILLLKNNQLTTLPEQFQYLTNLNTLTLKNNQL 353



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 127/251 (50%), Gaps = 2/251 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           + L+ L +  N + +L E +  L  L+ L +  N L+ELP  I  L  L +L +  N I 
Sbjct: 111 IHLENLDIRSNILTRLPESIGELKKLSFLILDDNNLNELPETIVNLSNLTNLSLRNNKIT 170

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            IP+ IG    +     ++NQL  LP S G  + L     + N + +LP+   +   +  
Sbjct: 171 TIPENIGQLVKIKNMLLNNNQLSSLPESFGNLVKLEKLFLTYNMLVTLPKSFDNLINIKI 230

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+L  +  N I S T+L ++    N L  +PE++ +L+ L  L +  N++ ++P+
Sbjct: 231 LELNNNRLIQIPEN-IGSLTLLEKISLQDNKLTMLPESMCNLTLLKSLIIMNNQLTTLPA 289

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            I    +L   ++ NN L+ALP  +G L K+  L L +NQL     +   L  L+ L L 
Sbjct: 290 RIGKLNNLENLFLENNLLTALPESIGDLRKISILLLKNNQLTTLPEQFQYLTNLNTLTLK 349

Query: 284 NNSLSGLPPEI 294
           NN L+ LP + 
Sbjct: 350 NNQLTTLPEQF 360



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 98/250 (39%), Gaps = 59/250 (23%)

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           + +SKL + G  LT L  +L+ +   L +L    N L+ + E I  L  L  L L  N+I
Sbjct: 19  TNVSKLVLSGQNLTTLPPSLL-NLIQLKKLYLDNNQLDTLSEIISELDNLQILSLKNNKI 77

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV 279
           +S+P SI     L    MG+N L  LP  +G L                      + L  
Sbjct: 78  VSLPDSIGNLTKLRSLTMGDNKLFLLPESIGNL----------------------IHLEN 115

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           LD+ +N L+ LP  IG++  L  L+L  N L  L  ++VN                    
Sbjct: 116 LDIRSNILTRLPESIGELKKLSFLILDDNNLNELPETIVN-------------------- 155

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                        + L+     LSL    ++ IP  I +  +I  + L+ N +  LP   
Sbjct: 156 ------------LSNLT----NLSLRNNKITTIPENIGQLVKIKNMLLNNNQLSSLPESF 199

Query: 400 SSCASLQVKF 409
            +   L+  F
Sbjct: 200 GNLVKLEKLF 209


>gi|428164457|gb|EKX33482.1| hypothetical protein GUITHDRAFT_81382, partial [Guillardia theta
           CCMP2712]
          Length = 566

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 164/361 (45%), Gaps = 43/361 (11%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
            P  I  +  LKSL +S N I  IP EIG  TAL +   + NQL  LPS +G   NL   
Sbjct: 6   FPKDIFSIPSLKSLSLSDNQIKVIPKEIGMLTALFQLRLNGNQLSSLPSEMGNLTNLQTL 65

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE--LIASKNLLNGMP 200
              NN    +P ++   + ++ L + GNK + L  +     T L +  L  S N L  +P
Sbjct: 66  WVQNNKFVDVPSEIQTLTGLTALSISGNKFSYLP-SFFCDMTSLKDLHLWLSFNQLKKLP 124

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L+ LIRL++  N+I S+P  I    +L E +  +NA++ +P  +G L +L  + L
Sbjct: 125 QAIGQLAGLIRLNVENNQISSLPPQIGQLTTLRELWANDNAITQIPPVIGLLVELREVRL 184

Query: 261 HSNQLKEYCVEACQL-RLSVLDLSNNS-----------------------LSGLPPEIGK 296
            +N L     E CQL  L  L +SNN                        ++ LP  IG 
Sbjct: 185 SNNSLSNLPNEVCQLGELKQLRISNNQIRALPNNFHLLTSLTELSLSGNPITALPVNIGI 244

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
            T L+ L L  N L+TL +++       L K     L  N   +   +   L  +     
Sbjct: 245 FTELKNLDLESNQLKTLPAAI-----GQLTKLQTLHLQSNNLHDLPNSIRKLKNL----- 294

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA---SLQVKFSDLV 413
              +EL L    L ++PS +W    +  + L  N ++ +PPE++  A    LQV ++ L 
Sbjct: 295 ---EELCLHDNQLESLPSGLWTLNNLKTISLENNQLRRIPPEIAGMAYLSRLQVAYNQLT 351

Query: 414 T 414
           +
Sbjct: 352 S 352



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 181/387 (46%), Gaps = 40/387 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD--VSFNSI 103
           +LQ L + +N    +  +++ L  LT L++S NK S LP+   ++  LK L   +SFN +
Sbjct: 61  NLQTLWVQNNKFVDVPSEIQTLTGLTALSISGNKFSYLPSFFCDMTSLKDLHLWLSFNQL 120

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGR-----------------------CLNLS 140
            K+P  IG    L++ +  +NQ+  LP  +G+                        + L 
Sbjct: 121 KKLPQAIGQLAGLIRLNVENNQISSLPPQIGQLTTLRELWANDNAITQIPPVIGLLVELR 180

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
           + + SNN +++LP ++    ++ +L +  N++  L NN     T LTEL  S N +  +P
Sbjct: 181 EVRLSNNSLSNLPNEVCQLGELKQLRISNNQIRALPNNF-HLLTSLTELSLSGNPITALP 239

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             IG  + L  LDL  N++ ++P++I     L   ++ +N L  LP  + KL  L  L L
Sbjct: 240 VNIGIFTELKNLDLESNQLKTLPAAIGQLTKLQTLHLQSNNLHDLPNSIRKLKNLEELCL 299

Query: 261 HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           H NQL+        L  L  + L NN L  +PPEI  M  L +L +  N L +L +++  
Sbjct: 300 HDNQLESLPSGLWTLNNLKTISLENNQLRRIPPEIAGMAYLSRLQVAYNQLTSLPTNI-- 357

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
           G  PAL     SRL  N +    +     I M T L     + ++    +  +P EI   
Sbjct: 358 GLLPAL-----SRL--NLEGNQLSLLSPAIGMLTLLEALKVDFNM----IQILPPEIGNL 406

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQ 406
             +  L +  N ++ LPPEL     L+
Sbjct: 407 RNLEDLSICNNQVKTLPPELFKLTKLR 433



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 194/402 (48%), Gaps = 42/402 (10%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           LSN SL ++PNEV     + GE         L++L +++N I  L  +   L  LT L++
Sbjct: 184 LSNNSLSNLPNEVC----QLGE---------LKQLRISNNQIRALPNNFHLLTSLTELSL 230

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
           S N ++ LP  IG    LK+LD+  N +  +P  IG  T L      SN L +LP+S+ +
Sbjct: 231 SGNPITALPVNIGIFTELKNLDLESNQLKTLPAAIGQLTKLQTLHLQSNNLHDLPNSIRK 290

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             NL +    +N + SLP  L   + +  + +E N+L  +    IA    L+ L  + N 
Sbjct: 291 LKNLEELCLHDNQLESLPSGLWTLNNLKTISLENNQLRRIPPE-IAGMAYLSRLQVAYNQ 349

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L RL+L  N++  +  +I     L    +  N +  LP E+G L  L
Sbjct: 350 LTSLPTNIGLLPALSRLNLEGNQLSLLSPAIGMLTLLEALKVDFNMIQILPPEIGNLRNL 409

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L + +NQ+K    E  +L +L  L +SNNSL+ +  EI  +T L+ L+ TGN +R L 
Sbjct: 410 EDLSICNNQVKTLPPELFKLTKLRRLAISNNSLNSISGEISLLTGLQSLVTTGNRIRILP 469

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS-----KELSLEGMNL 369
            SL       LL  L        D+  +   E++ TM +  ++T      KE+S   M +
Sbjct: 470 PSL------GLLTNLTELYLH--DNSLTHFPEEVGTMYSLKTITLNNNKLKEISAGFMRV 521

Query: 370 SA-------------IPSEIWEAGEITKLDLSRNSIQELPPE 398
           ++             +P+ +W+  +++ L+L  N +   PPE
Sbjct: 522 TSLTSMQLADNKIQIVPTWMWKVSKLSSLNLDGNPLSS-PPE 562



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 182/396 (45%), Gaps = 37/396 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L+ N I+ + +++  L  L  L ++ N+LS LP+ +G L  L++L V  N  + +
Sbjct: 16  LKSLSLSDNQIKVIPKEIGMLTALFQLRLNGNQLSSLPSEMGNLTNLQTLWVQNNKFVDV 75

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK--ASNNCITSLPEDLADCSKMSK 164
           P EI + T L     S N+   LPS      +L D     S N +  LP+ +   + + +
Sbjct: 76  PSEIQTLTGLTALSISGNKFSYLPSFFCDMTSLKDLHLWLSFNQLKKLPQAIGQLAGLIR 135

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L+VE N+++ L    I   T L EL A+ N +  +P  IG L  L  + L  N + ++P+
Sbjct: 136 LNVENNQISSLPPQ-IGQLTTLRELWANDNAITQIPPVIGLLVELREVRLSNNSLSNLPN 194

Query: 225 SISGCCSLAEFYMGN-----------------------NALSALPAELGKLSKLGTLDLH 261
            +     L +  + N                       N ++ALP  +G  ++L  LDL 
Sbjct: 195 EVCQLGELKQLRISNNQIRALPNNFHLLTSLTELSLSGNPITALPVNIGIFTELKNLDLE 254

Query: 262 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS---SL 317
           SNQLK       QL +L  L L +N+L  LP  I K+  L +L L  N L +L S   +L
Sbjct: 255 SNQLKTLPAAIGQLTKLQTLHLQSNNLHDLPNSIRKLKNLEELCLHDNQLESLPSGLWTL 314

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTK-----EDLITMATRLSVTS--KELSLEGMNLS 370
            N  T +L      R+P      A  ++       L ++ T + +      L+LEG  LS
Sbjct: 315 NNLKTISLENNQLRRIPPEIAGMAYLSRLQVAYNQLTSLPTNIGLLPALSRLNLEGNQLS 374

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +   I     +  L +  N IQ LPPE+ +  +L+
Sbjct: 375 LLSPAIGMLTLLEALKVDFNMIQILPPEIGNLRNLE 410



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 187/423 (44%), Gaps = 63/423 (14%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L+ N ++KL + +  L  L  LNV +N++S LP  IG+L  L+ L  + N+I +IP  
Sbjct: 113 LWLSFNQLKKLPQAIGQLAGLIRLNVENNQISSLPPQIGQLTTLRELWANDNAITQIPPV 172

Query: 110 IG-----------------------SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG                           L +   S+NQ++ LP++     +L++   S 
Sbjct: 173 IGLLVELREVRLSNNSLSNLPNEVCQLGELKQLRISNNQIRALPNNFHLLTSLTELSLSG 232

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVL----------------SNNL------IASWT 184
           N IT+LP ++   +++  LD+E N+L  L                SNNL      I    
Sbjct: 233 NPITALPVNIGIFTELKNLDLESNQLKTLPAAIGQLTKLQTLHLQSNNLHDLPNSIRKLK 292

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L EL    N L  +P  + +L+ L  + L  N++  IP  I+G   L+   +  N L++
Sbjct: 293 NLEELCLHDNQLESLPSGLWTLNNLKTISLENNQLRRIPPEIAGMAYLSRLQVAYNQLTS 352

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP  +G L  L  L+L  NQL         L  L  L +  N +  LPPEIG +  L  L
Sbjct: 353 LPTNIGLLPALSRLNLEGNQLSLLSPAIGMLTLLEALKVDFNMIQILPPEIGNLRNLEDL 412

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
            +  N ++TL         P L K  +  RL  + +S  S + E  I++ T L    + L
Sbjct: 413 SICNNQVKTL--------PPELFKLTKLRRLAISNNSLNSISGE--ISLLTGL----QSL 458

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG 422
              G  +  +P  +     +T+L L  NS+   P E+ +  SL  K   L  NK   IS 
Sbjct: 459 VTTGNRIRILPPSLGLLTNLTELYLHDNSLTHFPEEVGTMYSL--KTITLNNNKLKEISA 516

Query: 423 CYL 425
            ++
Sbjct: 517 GFM 519



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 148/309 (47%), Gaps = 35/309 (11%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKW--------WEAVDLQKLILAHNNIEKLKE 62
           +L+L + +L D+PN +   KN +E    D          W   +L+ + L +N + ++  
Sbjct: 273 TLHLQSNNLHDLPNSIRKLKNLEELCLHDNQLESLPSGLWTLNNLKTISLENNQLRRIPP 332

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  +  L+ L V++N+L+ LP  IG L  L  L++  N +  +   IG  T L      
Sbjct: 333 EIAGMAYLSRLQVAYNQLTSLPTNIGLLPALSRLNLEGNQLSLLSPAIGMLTLLEALKVD 392

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N ++ LP  +G   NL D    NN + +LP +L   +K+ +L +  N L  +S   I+ 
Sbjct: 393 FNMIQILPPEIGNLRNLEDLSICNNQVKTLPPELFKLTKLRRLAISNNSLNSISGE-ISL 451

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            T L  L+ + N                       RI  +P S+    +L E Y+ +N+L
Sbjct: 452 LTGLQSLVTTGN-----------------------RIRILPPSLGLLTNLTELYLHDNSL 488

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  P E+G +  L T+ L++N+LKE      ++  L+ + L++N +  +P  + K++ L 
Sbjct: 489 THFPEEVGTMYSLKTITLNNNKLKEISAGFMRVTSLTSMQLADNKIQIVPTWMWKVSKLS 548

Query: 302 KLLLTGNPL 310
            L L GNPL
Sbjct: 549 SLNLDGNPL 557


>gi|417770843|ref|ZP_12418746.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680944|ref|ZP_13242181.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327382|gb|EJO79634.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947186|gb|EKN97187.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665862|gb|EMF31349.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 590

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 171/385 (44%), Gaps = 30/385 (7%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 43  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 102

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 103 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 162

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 163 LWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV 221

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+ LP E+G+L  L  L    N+L     E  QL+ L  L+L 
Sbjct: 222 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLV 281

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 282 NNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGV 335

Query: 344 TK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGE 381
            +       E L     RL   +               +EL L     S +P EI     
Sbjct: 336 YRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKN 395

Query: 382 ITKLDLSRNSIQELPPELSSCASLQ 406
           +  L L  N ++++P E+    +L+
Sbjct: 396 LKYLALGLNGLKKIPSEIGQLRNLE 420



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 126/278 (45%), Gaps = 38/278 (13%)

Query: 17  SNRSLRDVPNE-VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED----LRNLPLLT 71
           SN  LR+V  + VY+N + A E     E + +  L L + N  +L        RNL  L 
Sbjct: 323 SNLDLREVAEDGVYRNLNLAQE-----EPLKVFDLRLQYKNFSQLFPKVILKFRNLRELY 377

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           + +      S LP  I  L  LK L +  N + KIP EIG    L   +  +N+L+ LP 
Sbjct: 378 LYDCG---FSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPK 434

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 435 EIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 477

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++P+ I    +L E  + +N  + LP E+GK
Sbjct: 478 -------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGK 530

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           L KL TLDL +NQL     E  QL+ L  L L NN  S
Sbjct: 531 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 568



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 163/390 (41%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 182 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 241

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 242 LPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 301

Query: 166 DVEGNKLTVLSNNLIASWTMLTEL----------------------------IASKNLLN 197
           ++  N L++     I      + L                            +  KN   
Sbjct: 302 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 361

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 362 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEA 421

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 422 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 481

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 482 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 528

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 529 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 558



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 186/461 (40%), Gaps = 87/461 (18%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 48  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 94

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 95  DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 154

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-------------- 179
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L   +              
Sbjct: 155 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDN 214

Query: 180 --------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                   I     L EL    N L  +P+ IG L  L  L   +NR+ ++P  +    +
Sbjct: 215 QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKN 274

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL---------KEYCVEACQLR------ 276
           L    + NN L+ LP E+G+L  L  L+L  N L         K +      LR      
Sbjct: 275 LQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDG 334

Query: 277 ------------LSVLDLS---NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---SSLV 318
                       L V DL     N     P  I K   LR+L L      TL    S L 
Sbjct: 335 VYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLK 394

Query: 319 NGPTPAL----LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---------LSLE 365
           N    AL    LK + S + +  + EA   +      A  L    KE         LSL 
Sbjct: 395 NLKYLALGLNGLKKIPSEIGQLRNLEALNLE------ANELERLPKEIGQLRNLQRLSLH 448

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              L   P+EI +  ++ KLDLS N     P E+    +LQ
Sbjct: 449 QNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 489


>gi|421137163|ref|ZP_15597251.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410018657|gb|EKO85494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 313

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 124/245 (50%), Gaps = 2/245 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  LN+  N+L+ LP  IG+L  L+ L+++ N    +P EIG    L + D   NQ   L
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSL 78

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G+  NL     + N +TSLP+++     + +LD++GN+ T L    I     L  L
Sbjct: 79  PKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLPKE-IGQLQNLRVL 137

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N L  +P+ IG L  L RLDL  N+  S+P  I     L    + +N  +  P E+
Sbjct: 138 NLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEI 197

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            +   L  L L  +QLK    E   L+ L  L L +N L+ LP EIG++  L +L L  N
Sbjct: 198 RQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQNLFELNLQDN 257

Query: 309 PLRTL 313
            L+TL
Sbjct: 258 KLKTL 262



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 130/264 (49%), Gaps = 2/264 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL L  N +  L +++  L  L VLN++ N+ + LP  IG+L  L+ LD+  N    
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTS 77

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   + + NQL  LP  +G+  NL       N  TSLP+++     +  L
Sbjct: 78  LPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVL 137

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++ GN+LT L    I     L  L  + N    +P+ IG L +L  L+L  NR    P  
Sbjct: 138 NLAGNQLTSLPKE-IGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKE 196

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    SL    +  + L  LP E+  L  L +L L SNQL     E  QL+ L  L+L +
Sbjct: 197 IRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQNLFELNLQD 256

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGN 308
           N L  LP EIG++  L  L L  N
Sbjct: 257 NKLKTLPKEIGQLQKLEVLRLYSN 280



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 144/311 (46%), Gaps = 38/311 (12%)

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           +  + +  +P  IG    L K +   NQL  LP  +G+  NL     + N  TSLP+++ 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
               + +LD++GN+ T L    I     L  L  + N L  +P+ IG L  L RLDL  N
Sbjct: 61  QLQNLERLDLDGNQFTSLPKE-IGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGN 119

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 276
           +  S+P  I    +L    +  N L++LP E+G+L  L  LDL  NQ      E  QL +
Sbjct: 120 QFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQK 179

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  L+L +N  +  P EI +  +L+ L L+G+ L+TL   ++      LL+ L+S     
Sbjct: 180 LEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL------LLQNLQS----- 228

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                                    L L+   L+++P EI +   + +L+L  N ++ LP
Sbjct: 229 -------------------------LHLDSNQLTSLPKEIGQLQNLFELNLQDNKLKTLP 263

Query: 397 PELSSCASLQV 407
            E+     L+V
Sbjct: 264 KEIGQLQKLEV 274



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 13/161 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+   L  +P E+              +  +L++L LA N    L +++  L  L  L
Sbjct: 137 LNLAGNQLTSLPKEI-------------GQLQNLERLDLAGNQFTSLPKEIGQLQKLEAL 183

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+ HN+ +  P  I +   LK L +S + +  +P EI     L      SNQL  LP  +
Sbjct: 184 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEI 243

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           G+  NL +    +N + +LP+++    K+  L +  N  ++
Sbjct: 244 GQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSNSFSL 284


>gi|421124179|ref|ZP_15584449.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421135047|ref|ZP_15595177.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410020930|gb|EKO87725.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410438666|gb|EKP87752.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 595

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 171/385 (44%), Gaps = 30/385 (7%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+ LP E+G+L  L  L    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 287 NNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGV 340

Query: 344 TK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGE 381
            +       E L     RL   +               +EL L     S +P EI     
Sbjct: 341 YRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKN 400

Query: 382 ITKLDLSRNSIQELPPELSSCASLQ 406
           +  L L  N ++++P E+    +L+
Sbjct: 401 LKYLALGLNGLKKIPSEIGQLRNLE 425



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 126/278 (45%), Gaps = 38/278 (13%)

Query: 17  SNRSLRDVPNE-VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED----LRNLPLLT 71
           SN  LR+V  + VY+N + A E     E + +  L L + N  +L        RNL  L 
Sbjct: 328 SNLDLREVAEDGVYRNLNLAQE-----EPLKVFDLRLQYKNFSQLFPKVILKFRNLRELY 382

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           + +      S LP  I  L  LK L +  N + KIP EIG    L   +  +N+L+ LP 
Sbjct: 383 LYDCG---FSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPK 439

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 440 EIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 482

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++P+ I    +L E  + +N  + LP E+GK
Sbjct: 483 -------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGK 535

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           L KL TLDL +NQL     E  QL+ L  L L NN  S
Sbjct: 536 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 163/390 (41%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 247 LPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 306

Query: 166 DVEGNKLTVLSNNLIASWTMLTEL----------------------------IASKNLLN 197
           ++  N L++     I      + L                            +  KN   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 563



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 186/461 (40%), Gaps = 87/461 (18%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-------------- 179
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L   +              
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDN 219

Query: 180 --------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                   I     L EL    N L  +P+ IG L  L  L   +NR+ ++P  +    +
Sbjct: 220 QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKN 279

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL---------KEYCVEACQLR------ 276
           L    + NN L+ LP E+G+L  L  L+L  N L         K +      LR      
Sbjct: 280 LQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDG 339

Query: 277 ------------LSVLDLS---NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---SSLV 318
                       L V DL     N     P  I K   LR+L L      TL    S L 
Sbjct: 340 VYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLK 399

Query: 319 NGPTPAL----LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---------LSLE 365
           N    AL    LK + S + +  + EA   +      A  L    KE         LSL 
Sbjct: 400 NLKYLALGLNGLKKIPSEIGQLRNLEALNLE------ANELERLPKEIGQLRNLQRLSLH 453

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              L   P+EI +  ++ KLDLS N     P E+    +LQ
Sbjct: 454 QNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494


>gi|418694701|ref|ZP_13255735.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957466|gb|EKO16373.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 425

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 135/269 (50%), Gaps = 2/269 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 118 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 177

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 178 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 237

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N    +P+ IG L  L  LDL  N++ ++P  
Sbjct: 238 YLSDNQLITLPKE-IEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLRNNQLKTLPKE 296

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L VL+  +
Sbjct: 297 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQVLNFGS 356

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N ++ L  EIG++  L+ L L  N L TL
Sbjct: 357 NQITTLSQEIGQLQNLKVLFLNNNQLTTL 385



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 57  RQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 116

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 117 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 176

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 177 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 235

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQ K    E  QL  L  LDL NN L  LP 
Sbjct: 236 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLRNNQLKTLPK 295

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 296 EIEQLKNLQTLFLSNNQLTIL 316



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 158/339 (46%), Gaps = 15/339 (4%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL +S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 52  VLELSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 112 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 171 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N    +P EIG++  L+ L L  N L
Sbjct: 231 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLRNNQL 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +        LK L++    N  ++ +   +++  +   L      LSL    L+
Sbjct: 291 KTLPKEIEQ------LKNLQTLFLSN--NQLTILPQEIGKLKNLLW-----LSLVYNQLT 337

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            +P+EI +   +  L+   N I  L  E+    +L+V F
Sbjct: 338 TLPNEIEQLKNLQVLNFGSNQITTLSQEIGQLQNLKVLF 376



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 120/263 (45%), Gaps = 34/263 (12%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 167 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 226

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N    IP EIG    L   D  
Sbjct: 227 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLR 286

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L       
Sbjct: 287 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTL------- 339

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
                            P  I  L  L  L+   N+I ++   I    +L   ++ NN L
Sbjct: 340 -----------------PNEIEQLKNLQVLNFGSNQITTLSQEIGQLQNLKVLFLNNNQL 382

Query: 243 SALPAELGKLSKLGTLDLHSNQL 265
           + LP E+G+L  L  L L+++QL
Sbjct: 383 TTLPKEIGQLKNLKKLYLNNHQL 405



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 139/318 (43%), Gaps = 21/318 (6%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           L+ + + F  +M +  EI +       +      K+L  +L   L++   + S   + +L
Sbjct: 10  LQKITIYFLFLMNLSCEIQAE------EVEPGTYKDLTKALQNPLDVRVLELSRQELKTL 63

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P ++     + +L +  N+LTVL    I     L  L    N L  +P+ I  L  L  L
Sbjct: 64  PIEIGQLKNLQRLYLHYNQLTVLPQE-IEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVL 122

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           DL  N++  +P  I    +L   Y+ +N L+ L  ++ +L  L +LDL +NQL     E 
Sbjct: 123 DLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEI 182

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  L LS N  +  P EIG++  L+ L L  N +  L + +        L+YL  
Sbjct: 183 EQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKK---LQYL-- 237

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
            L +N+        E L  + T        L L       IP EI +   +  LDL  N 
Sbjct: 238 YLSDNQLITLPKEIEQLKNLQT--------LDLSYNQFKIIPKEIGQLENLQTLDLRNNQ 289

Query: 392 IQELPPELSSCASLQVKF 409
           ++ LP E+    +LQ  F
Sbjct: 290 LKTLPKEIEQLKNLQTLF 307


>gi|418730631|ref|ZP_13289125.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774840|gb|EKR54844.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 595

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 171/385 (44%), Gaps = 30/385 (7%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+ LP E+G+L  L  L    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ LP EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 287 NNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAEDGV 340

Query: 344 TK-------EDLITMATRLSVTS---------------KELSLEGMNLSAIPSEIWEAGE 381
            +       E L     RL   +               +EL L     S +P EI     
Sbjct: 341 YRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKN 400

Query: 382 ITKLDLSRNSIQELPPELSSCASLQ 406
           +  L L  N ++++P E+    +L+
Sbjct: 401 LKYLALGLNGLKKIPSEIGQLRNLE 425



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 126/278 (45%), Gaps = 38/278 (13%)

Query: 17  SNRSLRDVPNE-VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED----LRNLPLLT 71
           SN  LR+V  + VY+N + A E     E + +  L L + N  +L        RNL  L 
Sbjct: 328 SNLDLREVAEDGVYRNLNLAQE-----EPLKVFDLRLQYKNFSQLFPKVILKFRNLRELY 382

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           + +      S LP  I  L  LK L +  N + KIP EIG    L   +  +N+L+ LP 
Sbjct: 383 LYDCG---FSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPK 439

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 440 EIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 482

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++P+ I    +L E  + +N  + LP E+GK
Sbjct: 483 -------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGK 535

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           L KL TLDL +NQL     E  QL+ L  L L NN  S
Sbjct: 536 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 163/390 (41%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       N+L  LP  +G+  NL      NN +T LP+++     +  L
Sbjct: 247 LPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDL 306

Query: 166 DVEGNKLTVLSNNLIASWTMLTEL----------------------------IASKNLLN 197
           ++  N L++     I      + L                            +  KN   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 563



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 186/461 (40%), Gaps = 87/461 (18%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-------------- 179
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L   +              
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDN 219

Query: 180 --------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                   I     L EL    N L  +P+ IG L  L  L   +NR+ ++P  +    +
Sbjct: 220 QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKN 279

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL---------KEYCVEACQLR------ 276
           L    + NN L+ LP E+G+L  L  L+L  N L         K +      LR      
Sbjct: 280 LQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDG 339

Query: 277 ------------LSVLDLS---NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---SSLV 318
                       L V DL     N     P  I K   LR+L L      TL    S L 
Sbjct: 340 VYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLK 399

Query: 319 NGPTPAL----LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE---------LSLE 365
           N    AL    LK + S + +  + EA   +      A  L    KE         LSL 
Sbjct: 400 NLKYLALGLNGLKKIPSEIGQLRNLEALNLE------ANELERLPKEIGQLRNLQRLSLH 453

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
              L   P+EI +  ++ KLDLS N     P E+    +LQ
Sbjct: 454 QNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494


>gi|338718176|ref|XP_001918318.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1 [Equus caballus]
          Length = 524

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 190/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 136 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 195 ALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL KL                      S+L +  N L+ LP  +G   +L 
Sbjct: 255 LETIPDGIGKLKKL----------------------SILKVDQNRLAQLPEAVGDCESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 293 ELVLTENRLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCGLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 340 FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTT 379



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 134/241 (55%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+L  L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLAQLPE-AVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCC L  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCGLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTTLKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 154/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQIADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L T+  
Sbjct: 223 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 261 GIGKLKKLSILKVDQNRLA--QLPEAVGDCESLT-----------ELVLTENRLLTLPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C  L V
Sbjct: 308 IGKLKKLSNLNADRNKLVSLPKEIGGCCGLTV 339



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 98/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L  +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALFHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|410901320|ref|XP_003964144.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Takifugu
           rubripes]
          Length = 524

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 133/241 (55%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L++ +N+L  LP +IG L  LK L +  N + +
Sbjct: 152 NLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPDSIGHLVGLKDLWLDGNQLNE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E+GS  +L+  D S N+++ LP  LG  L+L+D   S N I +LPE +    K+S L
Sbjct: 212 IPAEMGSMKSLLCVDVSENKIQRLPEELGGLLSLADLLVSQNLIDALPESIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
             + N+LT L  + I +   LTEL+ ++N +  +P +IG L RL   +  +N++ S+P  
Sbjct: 272 KADQNRLTYLPES-IGNCESLTELVLTENRIQSLPRSIGKLKRLSNFNCDRNQLTSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GC +L  F +  N L  +P+EL + ++L  LD+  N+L    +    LRL  L LS N
Sbjct: 331 IGGCQALNVFCVRENRLMRIPSELSQATELHVLDVSGNRLPNLPISLITLRLKALWLSVN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 181/395 (45%), Gaps = 49/395 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D I +  R+   L L    LRD+P +             +++ V L+KL L+ N I++L 
Sbjct: 29  DEIYRYERSLEELLLDANQLRDLPKQ-------------FFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFVQLVELDVSRNDIMEIPESISYCTALQVADFSGNPLTRLPETFPELRNLTCLSI 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL   +   N +T LPE L+   ++ +LD+  N+L  L ++ I 
Sbjct: 136 NDISLQVLPENIGNLTNLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPDS-IG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L +L    N LN +P  +GS+  L+ +D+ +N+I  +P  + G  SLA+  +  N 
Sbjct: 195 HLVGLKDLWLDGNQLNEIPAEMGSMKSLLCVDVSENKIQRLPEELGGLLSLADLLVSQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + ALP  +GKL KL                      S+L    N L+ LP  IG   +L 
Sbjct: 255 IDALPESIGKLKKL----------------------SILKADQNRLTYLPESIGNCESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N +++L  S+  G    L  +       N D    T+    I     L+V    
Sbjct: 293 ELVLTENRIQSLPRSI--GKLKRLSNF-------NCDRNQLTSLPKEIGGCQALNV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
             +    L  IPSE+ +A E+  LD+S N +  LP
Sbjct: 340 FCVRENRLMRIPSELSQATELHVLDVSGNRLPNLP 374



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 158/335 (47%), Gaps = 46/335 (13%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L +LP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRDLPKQFFQLVKLRKLGLSDNEIQRLPPEIANFVQLVELDVSRNDIMEIPESISYCT 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L +    L VL  N I + T L  L   +NL
Sbjct: 106 ALQVADF--SGNPLTRLPETFPELRNLTCLSINDISLQVLPEN-IGNLTNLVSLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +PE++  L RL  LDL  N + S+P SI     L + ++  N L+ +PAE+G +  L
Sbjct: 163 LTFLPESLSMLHRLEELDLGNNELYSLPDSIGHLVGLKDLWLDGNQLNEIPAEMGSMKSL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        CV          D+S N +  LP E+G + +L  LL++ N +  L  
Sbjct: 223 ------------LCV----------DVSENKIQRLPEELGGLLSLADLLVSQNLIDALPE 260

Query: 316 SLVNGPTPALLKYLRSR---LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           S+      ++LK  ++R   LPE+  +  S T                EL L    + ++
Sbjct: 261 SIGKLKKLSILKADQNRLTYLPESIGNCESLT----------------ELVLTENRIQSL 304

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           P  I +   ++  +  RN +  LP E+  C +L V
Sbjct: 305 PRSIGKLKRLSNFNCDRNQLTSLPKEIGGCQALNV 339



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 104/239 (43%), Gaps = 31/239 (12%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           NE+Y   D  G        V L+ L L  N + ++  ++ ++  L  ++VS NK+  LP 
Sbjct: 184 NELYSLPDSIGH------LVGLKDLWLDGNQLNEIPAEMGSMKSLLCVDVSENKIQRLPE 237

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            +G L  L  L VS N I  +P+ IG    L       N+L  LP S+G C +L++   +
Sbjct: 238 ELGGLLSLADLLVSQNLIDALPESIGKLKKLSILKADQNRLTYLPESIGNCESLTELVLT 297

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
            N I SLP  +    ++S  + + N+LT                         +P+ IG 
Sbjct: 298 ENRIQSLPRSIGKLKRLSNFNCDRNQLT------------------------SLPKEIGG 333

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
              L    + +NR++ IPS +S    L    +  N L  LP  L  L +L  L L  NQ
Sbjct: 334 CQALNVFCVRENRLMRIPSELSQATELHVLDVSGNRLPNLPISLITL-RLKALWLSVNQ 391



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 97/223 (43%), Gaps = 18/223 (8%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +P+    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQRLPPEIANFVQLVELDVSRNDIMEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +   + L   D   N L        +LR L+ L +++ SL  LP  IG +T L  L 
Sbjct: 98  PESISYCTALQVADFSGNPLTRLPETFPELRNLTCLSINDISLQVLPENIGNLTNLVSLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKEL 362
           L  N L  L  SL      ++L  L          E      +L ++   +   V  K+L
Sbjct: 158 LRENLLTFLPESL------SMLHRL---------EELDLGNNELYSLPDSIGHLVGLKDL 202

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            L+G  L+ IP+E+     +  +D+S N IQ LP EL    SL
Sbjct: 203 WLDGNQLNEIPAEMGSMKSLLCVDVSENKIQRLPEELGGLLSL 245


>gi|449283629|gb|EMC90234.1| Leucine-rich repeat-containing protein 1, partial [Columba livia]
          Length = 471

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L++ +N+L  LP  IG L  LK L +  N + +
Sbjct: 99  NLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLTE 158

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E+G+   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    ++S L
Sbjct: 159 IPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLRRLSIL 218

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ NKL  L+++ I     LTEL+ ++N L  +P++IG L +L  L+  +N++ S+P  
Sbjct: 219 KVDQNKLIQLTDS-IGDCESLTELVLTENQLQSLPKSIGRLKKLNNLNADRNKLTSLPKE 277

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N LS +P+E+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 278 IGGCCSLNVFSVRDNRLSRIPSEISQAAELHVLDVAGNRLMYLPLSLTTLKLKALWLSDN 337

Query: 286 S 286
            
Sbjct: 338 Q 338



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 173/361 (47%), Gaps = 36/361 (9%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           +++ V L+KL L+ N I++L  ++ N   L  L++S N + E+P +I     L+  D S 
Sbjct: 2   FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQVADFSG 61

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + ++P+       L     +   L+ LP ++G   NL+  +   N +T LPE LA   
Sbjct: 62  NPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQ 121

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++ +LD+  N+L  L   + A +  L +L    N L  +P+ +G+L  L+ LD+ +N++ 
Sbjct: 122 RLEELDLGNNELYHLPETIGALFN-LKDLWLDGNQLTEIPQEVGNLKNLLCLDVSENKLE 180

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 280
            +P  ISG  SL +  +  N L  LP  +GKL                       RLS+L
Sbjct: 181 CLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLR----------------------RLSIL 218

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
            +  N L  L   IG   +L +L+LT N L++L  S+        LK L +    N D  
Sbjct: 219 KVDQNKLIQLTDSIGDCESLTELVLTENQLQSLPKSI------GRLKKLNNL---NADRN 269

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
             T+    I     L+V     S+    LS IPSEI +A E+  LD++ N +  LP  L+
Sbjct: 270 KLTSLPKEIGGCCSLNV----FSVRDNRLSRIPSEISQAAELHVLDVAGNRLMYLPLSLT 325

Query: 401 S 401
           +
Sbjct: 326 T 326



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 151/322 (46%), Gaps = 42/322 (13%)

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDFKASN 146
           +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C  L ++DF  S 
Sbjct: 4   QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQVADF--SG 61

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LPE             E   LT LS N I+              L  +PE IG+L
Sbjct: 62  NPLTRLPESFP----------ELQNLTCLSVNDIS--------------LQALPENIGNL 97

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  L+L +N +  +P S++    L E  +GNN L  LP  +G L  L  L L  NQL 
Sbjct: 98  YNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLT 157

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           E   E   L+ L  LD+S N L  LP EI  +T+L  LL++ N L+ L   +      ++
Sbjct: 158 EIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLRRLSI 217

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           LK  +++L +  DS                S+T  EL L    L ++P  I    ++  L
Sbjct: 218 LKVDQNKLIQLTDSIGDCE-----------SLT--ELVLTENQLQSLPKSIGRLKKLNNL 264

Query: 386 DLSRNSIQELPPELSSCASLQV 407
           +  RN +  LP E+  C SL V
Sbjct: 265 NADRNKLTSLPKEIGGCCSLNV 286



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 45/95 (47%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D   +   L +L+L  N ++ L + +  L  L  LN   NKL+ LP  IG    L    V
Sbjct: 230 DSIGDCESLTELVLTENQLQSLPKSIGRLKKLNNLNADRNKLTSLPKEIGGCCSLNVFSV 289

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
             N + +IP EI  A  L   D + N+L  LP SL
Sbjct: 290 RDNRLSRIPSEISQAAELHVLDVAGNRLMYLPLSL 324


>gi|242046482|ref|XP_002399506.1| lumican, putative [Ixodes scapularis]
 gi|215497547|gb|EEC07041.1| lumican, putative [Ixodes scapularis]
          Length = 546

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 202/402 (50%), Gaps = 36/402 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  L ++P  VY+                L  L L  N I ++ +++ NL  LT+L
Sbjct: 136 LDLRHNKLNEIPEVVYR-------------LTSLTTLFLRFNRIREVGDNIANLTNLTML 182

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ ELPA IG+L  L + D S N +  +P EIG+   L   D   N+L ++P ++
Sbjct: 183 SLRENKIRELPAGIGKLTQLITFDASNNQLKHLPTEIGNCVQLSTLDVQHNELIDIPETI 242

Query: 134 G--RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           G  + L     +   N +TS+P+ L++C  M+  +VE N ++ L   L++S++ L+ L  
Sbjct: 243 GNLKVLTRLGLRQVYNQLTSVPKSLSNCVNMTDFNVESNLVSQLPEGLLSSFSNLSSLTL 302

Query: 192 SKNLLNGMPETIGSLSRL---IRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPA 247
           S+N     P  +G  S+      +++  N+I  IP  I S   +L +  M +N L++LP 
Sbjct: 303 SRNNFTSYP--VGGPSQFCSVYAINMEHNQINKIPFGIFSRARNLTKLNMKDNQLTSLPL 360

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           ++G  + +  L+L +NQL +   +   L+ L VL LSNN L  LPP IG +  LR L L 
Sbjct: 361 DMGTWTNMVELNLGTNQLSKVPDDIQYLQSLEVLTLSNNLLRRLPPTIGSLAKLRVLDLE 420

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L  L + +       +L+ L+  + ++    +       ++  T L V         
Sbjct: 421 ENRLDALPNEI------GMLRELQKLVAQSNQLSSLPRAIGHLSNLTYLGVGEN------ 468

Query: 367 MNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
            NL+ IP EI     +  L ++ N ++  LP EL+ C++LQ+
Sbjct: 469 -NLNFIPEEIGTLDSLESLYINDNPNLHSLPFELALCSNLQI 509



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 190/412 (46%), Gaps = 85/412 (20%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+LQ L L+ N++  L + L +L  L VL++ HNKL+E+P  +  L  L +L + FN I 
Sbjct: 108 VNLQTLALSENSLTSLPDTLAHLRQLRVLDLRHNKLNEIPEVVYRLTSLTTLFLRFNRIR 167

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++ D I + T L       N+++ELP+ +G+   L  F ASNN +  LP ++ +C ++S 
Sbjct: 168 EVGDNIANLTNLTMLSLRENKIRELPAGIGKLTQLITFDASNNQLKHLPTEIGNCVQLST 227

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ--NRILSI 222
           LDV+ N+L                          +PETIG+L  L RL L Q  N++ S+
Sbjct: 228 LDVQHNELI------------------------DIPETIGNLKVLTRLGLRQVYNQLTSV 263

Query: 223 PSSISGCCSLAEFYMGNNALSALPA----------------------ELGKLSKLGT--- 257
           P S+S C ++ +F + +N +S LP                        +G  S+  +   
Sbjct: 264 PKSLSNCVNMTDFNVESNLVSQLPEGLLSSFSNLSSLTLSRNNFTSYPVGGPSQFCSVYA 323

Query: 258 LDLHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
           +++  NQ+ +  + + +    L+ L++ +N L+ LP ++G  T + +L L  N L  +  
Sbjct: 324 INMEHNQINKIPFGIFSRARNLTKLNMKDNQLTSLPLDMGTWTNMVELNLGTNQLSKV-- 381

Query: 316 SLVNGPTPALLKYLRS------------RLPENEDSEASTTKEDLITMATRLSVTSKELS 363
                  P  ++YL+S            RLP    S A     DL     RL     E+ 
Sbjct: 382 -------PDDIQYLQSLEVLTLSNNLLRRLPPTIGSLAKLRVLDL--EENRLDALPNEIG 432

Query: 364 L---------EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +         +   LS++P  I     +T L +  N++  +P E+ +  SL+
Sbjct: 433 MLRELQKLVAQSNQLSSLPRAIGHLSNLTYLGVGENNLNFIPEEIGTLDSLE 484



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 143/321 (44%), Gaps = 54/321 (16%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS--FNSIMKIPDEI 110
           ++N ++ L  ++ N   L+ L+V HN+L ++P  IG L +L  L +   +N +  +P  +
Sbjct: 208 SNNQLKHLPTEIGNCVQLSTLDVQHNELIDIPETIGNLKVLTRLGLRQVYNQLTSVPKSL 267

Query: 111 GSATALVKFDCSSNQLKELPSS-------------------------------------- 132
            +   +  F+  SN + +LP                                        
Sbjct: 268 SNCVNMTDFNVESNLVSQLPEGLLSSFSNLSSLTLSRNNFTSYPVGGPSQFCSVYAINME 327

Query: 133 -----------LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
                        R  NL+     +N +TSLP D+   + M +L++  N+L+ + ++ I 
Sbjct: 328 HNQINKIPFGIFSRARNLTKLNMKDNQLTSLPLDMGTWTNMVELNLGTNQLSKVPDD-IQ 386

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L  L  S NLL  +P TIGSL++L  LDL +NR+ ++P+ I     L +    +N 
Sbjct: 387 YLQSLEVLTLSNNLLRRLPPTIGSLAKLRVLDLEENRLDALPNEIGMLRELQKLVAQSNQ 446

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN-SLSGLPPEIGKMTT 299
           LS+LP  +G LS L  L +  N L     E   L  L  L +++N +L  LP E+   + 
Sbjct: 447 LSSLPRAIGHLSNLTYLGVGENNLNFIPEEIGTLDSLESLYINDNPNLHSLPFELALCSN 506

Query: 300 LRKLLLTGNPLRTLRSSLVNG 320
           L+ + +   PL  +   +VNG
Sbjct: 507 LQIMSIENCPLSQIPPEIVNG 527



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 13/167 (7%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   AR    LN+ +  L  +P ++            W   V+L    L  N + K+ +D
Sbjct: 338 IFSRARNLTKLNMKDNQLTSLPLDM----------GTWTNMVELN---LGTNQLSKVPDD 384

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           ++ L  L VL +S+N L  LP  IG L  L+ LD+  N +  +P+EIG    L K    S
Sbjct: 385 IQYLQSLEVLTLSNNLLRRLPPTIGSLAKLRVLDLEENRLDALPNEIGMLRELQKLVAQS 444

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           NQL  LP ++G   NL+      N +  +PE++     +  L +  N
Sbjct: 445 NQLSSLPRAIGHLSNLTYLGVGENNLNFIPEEIGTLDSLESLYINDN 491


>gi|186686533|ref|YP_001869729.1| hypothetical protein Npun_R6524 [Nostoc punctiforme PCC 73102]
 gi|186468985|gb|ACC84786.1| leucine-rich repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1124

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 192/419 (45%), Gaps = 57/419 (13%)

Query: 5   LKAARTSGS--LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           ++ AR  G+  L+LS   L ++P  +                  LQ+L L+ N + +L E
Sbjct: 14  IEKARQEGAIELDLSKIELTEIPEAIAS-------------LTQLQQLDLSRNQVTQLPE 60

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
            + +L  L  L++S+NKL++LP AI  L  L+ LD+S N + ++P+ I S   L + +  
Sbjct: 61  AIASLTQLQTLDLSNNKLTQLPEAIASLARLQRLDLSNNQLTELPEAIASLAQLQELNLR 120

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +NQL ELP ++     L     SNN +T LPE +A  +++   D+  N+LT L N+L  S
Sbjct: 121 NNQLTELPEAIASLTRLQRLDLSNNQLTELPEAIASLTQLQSFDLSHNELTELPNSL--S 178

Query: 183 WTMLTELI-ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
             +  E+     NLL  +P  I  L  L  L ++ N +  IPS I     L    +G N 
Sbjct: 179 RLLYLEIFDCGSNLLRQVPSVIKELKGLKELYIYANDLEVIPSWICDLHVLEILSIGGNQ 238

Query: 242 LSALPAELGKLSKLGTLDLHSN-----------------QLKEYCVEACQL--------- 275
           +S LP  L KL  L  + L ++                 Q++      C+L         
Sbjct: 239 ISELPKSLDKLQSLEFIILGADDGGNPLSKLPPCIQRIKQIRRIWANNCELHFLPDWLNE 298

Query: 276 --RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
             +L  L L +N L+ LP  +G++  L  + L  NPL    ++     T A+L+YLR+R 
Sbjct: 299 FPQLEELYLGSNCLTDLPASLGQLPHLDDIQLDHNPLNPDLAAAYEQGTEAVLQYLRAR- 357

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
                SEA  T    +  A  + +   E+    + L A+  + WE G  T   +   S+
Sbjct: 358 -----SEAQVT----LNEAKLILIGEGEVGKSCL-LGALRGDEWEDGRPTTHGIEIKSV 406



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 121/260 (46%), Gaps = 38/260 (14%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T +PE +A  +++ +LD+  N++T L    IAS T L  L  S N L  +PE I SL+R
Sbjct: 32  LTEIPEAIASLTQLQQLDLSRNQVTQLPEA-IASLTQLQTLDLSNNKLTQLPEAIASLAR 90

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RLDL  N++  +P +I+    L E  + NN L+ LP  +  L++L  LDL +NQL E 
Sbjct: 91  LQRLDLSNNQLTELPEAIASLAQLQELNLRNNQLTELPEAIASLTRLQRLDLSNNQLTEL 150

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                 L +L   DLS+N L+ LP  + ++  L       N LR +         P+++K
Sbjct: 151 PEAIASLTQLQSFDLSHNELTELPNSLSRLLYLEIFDCGSNLLRQV---------PSVIK 201

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            L+                             KEL +   +L  IPS I +   +  L +
Sbjct: 202 ELKGL---------------------------KELYIYANDLEVIPSWICDLHVLEILSI 234

Query: 388 SRNSIQELPPELSSCASLQV 407
             N I ELP  L    SL+ 
Sbjct: 235 GGNQISELPKSLDKLQSLEF 254


>gi|417783613|ref|ZP_12431331.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409953237|gb|EKO07738.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 595

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 178/403 (44%), Gaps = 43/403 (10%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+  P E+G+L  L  L    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLR----------------TLRSSLVNGPTPAL-- 325
           NN L+  P EIG++  L+ L L  NPL                  LR    NG    L  
Sbjct: 287 NNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSSLDLREVAENGVYRNLNL 346

Query: 326 -----LKYLRSRLPENEDSEASTTKEDLITMATR--------LSVTSKELSL-------- 364
                LK     L E +D   S  K  L     R         S   KE+SL        
Sbjct: 347 AQEEPLKVFELSL-EYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISLLKNLKYLA 405

Query: 365 EGMN-LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            G+N L  IPSEI +   +  L+L  N ++ LP E+    +LQ
Sbjct: 406 LGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQ 448



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 164/390 (42%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+S N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSSLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISLLKNLKYLALGLNGLKKIPSEIGQLRNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    +              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLTAEIGQLQ------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 563



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 134/294 (45%), Gaps = 43/294 (14%)

Query: 17  SNRSLRDVP-NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIE----KLKEDLRNLPLLT 71
           S+  LR+V  N VY+N + A E     E + + +L L + +      K+    RNL    
Sbjct: 328 SSLDLREVAENGVYRNLNLAQE-----EPLKVFELSLEYKDFSQSFPKVILKFRNL---R 379

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            LN+     S LP  I  L  LK L +  N + KIP EIG    L   +  +N+L+ LP 
Sbjct: 380 GLNLYDCGFSTLPKEISLLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPK 439

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 440 EIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 482

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++ + I    +L E  + +N  + LP E+GK
Sbjct: 483 -------FPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGK 535

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           L KL TLDL +NQL     E  QL+ L  L L NN LS     + +   +RKLL
Sbjct: 536 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS-----LKEQERIRKLL 584



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 190/468 (40%), Gaps = 101/468 (21%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL---------------SNN 178
           G+  NL     S N +T+LP+++     +  LD++ N+ T L               S+N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDN 219

Query: 179 LIASWTM-------LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
            +A+  +       L EL    N L   P+ IG L  L  L   +NR+ ++P  +    +
Sbjct: 220 QLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQN 279

Query: 232 LAEFYMGNNALSALPAELGKLSKL------------------------GTLDLHS----- 262
           L    + NN L+  P E+G+L  L                         +LDL       
Sbjct: 280 LQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSSLDLREVAENG 339

Query: 263 -----NQLKEYCVEACQLRLSVLDLSNN-------------------SLSGLPPEIGKMT 298
                N  +E  ++  +L L   D S +                     S LP EI  + 
Sbjct: 340 VYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISLLK 399

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L+ L L  N L+ +         P+ +  LR+   E  + EA+   E L     +L   
Sbjct: 400 NLKYLALGLNGLKKI---------PSEIGQLRNL--EALNLEANEL-ERLPKEIGQLRNL 447

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            K LSL    L   P+EI +  ++ KLDLS N     P E+    +LQ
Sbjct: 448 QK-LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 99/228 (43%), Gaps = 23/228 (10%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
            P  I +   L+ L++       +P EI     L       N LK++PS +G+  NL   
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISLLKNLKYLALGLNGLKKIPSEIGQLRNLEAL 427

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
               N +  LP+++     + KL +  N L +     I     L +L  S N     P+ 
Sbjct: 428 NLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKE 486

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L+L +N++ ++ + I    +L E  + +N  + LP E+GKL KL TLDL  
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLR- 545

Query: 263 NQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
                                NN L+ LP EIG++  L+ L L  N L
Sbjct: 546 ---------------------NNQLTTLPTEIGQLQNLQWLYLQNNQL 572


>gi|124002029|ref|ZP_01686883.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992495|gb|EAY31840.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 395

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 137/265 (51%), Gaps = 22/265 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L + +N + KL + ++ L  L V+++  NKL+ +P+ IG L  L+ LD+  N I 
Sbjct: 119 VHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPSEIGALKSLRVLDLEKNGIS 178

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            IP ++G+ + L   D  SNQ+K++P ++G   +L      NN I SLP++L +  K+  
Sbjct: 179 TIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNNLIDSLPDELKNMVKLEH 238

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V  N+L              +    S+ L        G L  L  LDL +N+++ +P 
Sbjct: 239 LYVSNNRLD-------------SSFAKSRFL--------GKLQSLKTLDLSKNKLVRLPQ 277

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            I    +L    + NN L ALP  LG++  L  LDL +NQL        QL +L  L L 
Sbjct: 278 DIVQLKNLKTLILHNNQLQALPDSLGEIENLEELDLRNNQLTVLPKSVLQLAKLKKLILR 337

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGN 308
           NN L+ LP EI +M  L++L L GN
Sbjct: 338 NNQLTVLPEEIAQMKNLKELDLRGN 362



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 163/327 (49%), Gaps = 26/327 (7%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++ +  L ++P  IG+L  L+ LD+  N I  +P  IGS   L   D   +++  LP 
Sbjct: 54  LLSLKNKGLKKVPKEIGKLKKLQMLDLGLNQIDTLPPCIGSLKFLQILDLWGDKIAYLPD 113

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           ++G  ++L       N +  LP+ +   +++  +D+EGNKLT + +  I +   L  L  
Sbjct: 114 TIGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPSE-IGALKSLRVLDL 172

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            KN ++ +P  +G+LS+L  LDL  N+I  IP +I G  SL   Y+ NN + +LP EL  
Sbjct: 173 EKNGISTIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNNLIDSLPDELKN 232

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           + KL  L + +N+L     ++  L     L  LDLS N L  LP +I ++  L+ L+L  
Sbjct: 233 MVKLEHLYVSNNRLDSSFAKSRFLGKLQSLKTLDLSKNKLVRLPQDIVQLKNLKTLILHN 292

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS----KELS 363
           N L+ L  SL                 E E+ E    + + +T+  + SV      K+L 
Sbjct: 293 NQLQALPDSL----------------GEIENLEELDLRNNQLTVLPK-SVLQLAKLKKLI 335

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRN 390
           L    L+ +P EI +   + +LDL  N
Sbjct: 336 LRNNQLTVLPEEIAQMKNLKELDLRGN 362



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 136/311 (43%), Gaps = 30/311 (9%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I D +  A         +  LK++P  +G+   L       N I +LP  +     +  L
Sbjct: 42  IDDAVHDAANAYLLSLKNKGLKKVPKEIGKLKKLQMLDLGLNQIDTLPPCIGSLKFLQIL 101

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+ G+K+  L +  I +   L  L    N L  +P++I  L++L  +DL  N++  IPS 
Sbjct: 102 DLWGDKIAYLPDT-IGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPSE 160

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    SL    +  N +S +P++LG LS+L  LDL SNQ+K+       LR L  L L N
Sbjct: 161 IGALKSLRVLDLEKNGISTIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRN 220

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---------RLPE 335
           N +  LP E+  M  L  L ++ N    L SS         L+ L++         RLP+
Sbjct: 221 NLIDSLPDELKNMVKLEHLYVSNN---RLDSSFAKSRFLGKLQSLKTLDLSKNKLVRLPQ 277

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
                      D++ +        K L L    L A+P  + E   + +LDL  N +  L
Sbjct: 278 -----------DIVQLKNL-----KTLILHNNQLQALPDSLGEIENLEELDLRNNQLTVL 321

Query: 396 PPELSSCASLQ 406
           P  +   A L+
Sbjct: 322 PKSVLQLAKLK 332



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 20/211 (9%)

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           +T+ SL  L + +L++     I  ++    +     + N  L  +P E+GKL KL  LDL
Sbjct: 25  DTLLSLQELEQKELYK----VIDDAVHDAANAYLLSLKNKGLKKVPKEIGKLKKLQMLDL 80

Query: 261 HSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
             NQ+     C+ + +  L +LDL  + ++ LP  IG +  L+ L +  N L  L  S+ 
Sbjct: 81  GLNQIDTLPPCIGSLKF-LQILDLWGDKIAYLPDTIGNLVHLKFLYMDYNKLVKLPKSI- 138

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                        +L + +  +    K   I        + + L LE   +S IPS++  
Sbjct: 139 ------------KKLTQLQVIDLEGNKLTRIPSEIGALKSLRVLDLEKNGISTIPSQLGN 186

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQVKF 409
             ++  LDL  N I+++P  +    SL+  +
Sbjct: 187 LSQLEVLDLDSNQIKQIPYAIGGLRSLKYLY 217


>gi|455791548|gb|EMF43355.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 371

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 152/293 (51%), Gaps = 7/293 (2%)

Query: 22  RDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLS 81
            +V  E Y++  +A +       +D++ L L+   ++ L + +  L  L  LN+  N+L+
Sbjct: 30  EEVEPEAYQDLTKALQN-----PLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLT 84

Query: 82  ELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
            +   I +L  L+ L++  N +  I  EI     L   D  SNQ+  L   +G+  NL  
Sbjct: 85  TILKEIEQLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKV 144

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
              +NN +T+LP+++     +  L++  N+L  L    IA    L EL  S+N L  +P+
Sbjct: 145 LFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKE-IAQLKNLQELYLSENQLMTLPK 203

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG L +L  L+L  N+++++P  I+   +L E Y+  N L  LP E+G+L KL  L L+
Sbjct: 204 EIGQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLN 263

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +NQL     E  QL+ L VL LS N    +P E G++  L++L L  N L T+
Sbjct: 264 ANQLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTI 316



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 147/286 (51%), Gaps = 12/286 (4%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDE----AGEGDKWWEAVD----LQKLILAHNNIEKLKED 63
           L+LS + L+ +P ++   KN  E    A +     + ++    LQ+L L  N +  + ++
Sbjct: 53  LDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQELNLDANQLTTILKE 112

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL+   N+++ L   IG+L  LK L ++ N +  +P EIG    L   +  +
Sbjct: 113 IEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWN 172

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP  + +  NL +   S N + +LP+++    K+ +L++  N+L  L    IA  
Sbjct: 173 NQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPKE-IAQL 231

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL  S+N L  +P+ IG L +L +L L+ N++ +IP+ I+   +L   ++  N   
Sbjct: 232 KNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLFLSYNQFK 291

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            +P E G+L  L  L+L +NQL     E  QL+ L  L L NN  S
Sbjct: 292 TIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNNQFS 337



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 147/322 (45%), Gaps = 38/322 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG+L  L+ L++  N +  I  EI     L + +  +NQL  +  
Sbjct: 52  VLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQELNLDANQLTTILK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N IT+L +++     +  L +  N+LT L                
Sbjct: 112 EIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L  N+++++P  I+   +L E Y+  N L  LP E+G+
Sbjct: 156 --------PKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L+L +NQL     E  QL+ L  L LS N L  LP EIG++  L+KL L  N L
Sbjct: 208 LEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQL 267

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            T+ + +      A L+ L+           S  +   I +        +EL+L+   L+
Sbjct: 268 TTIPNEI------AQLQNLQVLF-------LSYNQFKTIPVEFGQLKNLQELNLDANQLT 314

Query: 371 AIPSEIWEAGEITKLDLSRNSI 392
            IP EI +   +  L L  N  
Sbjct: 315 TIPKEIGQLQNLQTLYLRNNQF 336



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 129/291 (44%), Gaps = 61/291 (20%)

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D S  +LK LP  +G+  NL +     N +T++ +++     + +L+++ N+LT      
Sbjct: 54  DLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQELNLDANQLT------ 107

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
               T+L E              I  L  L  LD   N+I ++   I    +L   ++ N
Sbjct: 108 ----TILKE--------------IEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNN 149

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L+ LP E+G+L  L TL+L +NQL     E  QL+ L  L LS N L  LP EIG++ 
Sbjct: 150 NQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLE 209

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L++L L  N L TL   +      A LK L+                            
Sbjct: 210 KLQELNLWNNQLITLPKEI------AQLKNLQ---------------------------- 235

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
             EL L    L  +P EI +  ++ KL L+ N +  +P E++   +LQV F
Sbjct: 236 --ELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLF 284



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 10/172 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +LNL N  L  +P E+   KN  E    +     +         LQ+L L +N +  L +
Sbjct: 167 TLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPK 226

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  IG+L  L+ L ++ N +  IP+EI     L     S
Sbjct: 227 EIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLFLS 286

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            NQ K +P   G+  NL +     N +T++P+++     +  L +  N+ ++
Sbjct: 287 YNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNNQFSI 338


>gi|124010200|ref|ZP_01694856.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123983744|gb|EAY24171.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 356

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 146/267 (54%), Gaps = 2/267 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L++L +    +++L E++  L  L +L +S +KL+ LP +IG+L  LK LD++   
Sbjct: 70  EFKSLKRLTIECKQLKELPEEIGELENLEILTLSGSKLTSLPKSIGKLKKLKILDLNRGK 129

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           ++ +P EIG+ T L K     NQL ELP  +G+  NL     + N +  LP+++    K+
Sbjct: 130 LISLPKEIGNLTNLYKLRVGLNQLVELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKL 189

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           + L + GNKL  L  + I +   L  L    N L G+P+ I  L+ L  L L  N++ ++
Sbjct: 190 ALLYLGGNKLECLPKS-IGNLRELESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTAL 248

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P+ I G   L +  + +N L  LP E+G+L  L  L+L +N+L+    E  QL  L   D
Sbjct: 249 PAGIGGLKKLKKMGLQDNRLRKLPKEIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFD 308

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           L NN L  LP EIG++  L+KL L  N
Sbjct: 309 LENNRLRNLPEEIGQLANLQKLYLEHN 335



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 137/279 (49%), Gaps = 7/279 (2%)

Query: 41  WWEAV-----DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKS 95
           W +A+      L+ ++L ++++  L   +     L  L +   +L ELP  IGEL  L+ 
Sbjct: 40  WQDALVHSSSGLKSMVLRNDSLTVLSSRIAEFKSLKRLTIECKQLKELPEEIGELENLEI 99

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           L +S + +  +P  IG    L   D +  +L  LP  +G   NL   +   N +  LP++
Sbjct: 100 LTLSGSKLTSLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYKLRVGLNQLVELPKE 159

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           +     +  L + GN+L  L    I S   L  L    N L  +P++IG+L  L  L L 
Sbjct: 160 IGQLKNLISLTLNGNQLVELPQE-IGSLGKLALLYLGGNKLECLPKSIGNLRELESLHLG 218

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N +  +P  I    +L   Y+ NN L+ALPA +G L KL  + L  N+L++   E  QL
Sbjct: 219 YNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKMGLQDNRLRKLPKEIGQL 278

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
             L  L+L NN L  LP EI ++T+LR+  L  N LR L
Sbjct: 279 GNLQELNLKNNRLRRLPEEIDQLTSLREFDLENNRLRNL 317



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 105/206 (50%), Gaps = 1/206 (0%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L +++ NL  L  L V  N+L ELP  IG+L  L SL ++ N ++++P EIGS   L   
Sbjct: 133 LPKEIGNLTNLYKLRVGLNQLVELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKLALL 192

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
               N+L+ LP S+G    L       N +  LP+++   + +  L +E N+LT L    
Sbjct: 193 YLGGNKLECLPKSIGNLRELESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAG- 251

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L ++    N L  +P+ IG L  L  L+L  NR+  +P  I    SL EF + N
Sbjct: 252 IGGLKKLKKMGLQDNRLRKLPKEIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLEN 311

Query: 240 NALSALPAELGKLSKLGTLDLHSNQL 265
           N L  LP E+G+L+ L  L L  N+ 
Sbjct: 312 NRLRNLPEEIGQLANLQKLYLEHNRF 337



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 141/315 (44%), Gaps = 38/315 (12%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           LKS+ +  +S+  +   I    +L +      QLKELP  +G   NL     S + +TSL
Sbjct: 51  LKSMVLRNDSLTVLSSRIAEFKSLKRLTIECKQLKELPEEIGELENLEILTLSGSKLTSL 110

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+ +    K+  LD+   KL  L    I + T L +L    N L  +P+ IG L  LI L
Sbjct: 111 PKSIGKLKKLKILDLNRGKLISLPKE-IGNLTNLYKLRVGLNQLVELPKEIGQLKNLISL 169

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L+ N+++ +P  I     LA  Y+G N L  LP  +G L +L +L L  N LK    E 
Sbjct: 170 TLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPKSIGNLRELESLHLGYNNLKGLPDEI 229

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL  L  L L NN L+ LP  IG +  L+K+ L  N LR                    
Sbjct: 230 QQLTNLGWLYLENNQLTALPAGIGGLKKLKKMGLQDNRLR-------------------- 269

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
           +LP+      +                 +EL+L+   L  +P EI +   + + DL  N 
Sbjct: 270 KLPKEIGQLGNL----------------QELNLKNNRLRRLPEEIDQLTSLREFDLENNR 313

Query: 392 IQELPPELSSCASLQ 406
           ++ LP E+   A+LQ
Sbjct: 314 LRNLPEEIGQLANLQ 328



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 78/138 (56%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +NN++ L ++++ L  L  L + +N+L+ LPA IG L  LK + +  N + K
Sbjct: 211 ELESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKMGLQDNRLRK 270

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L + +  +N+L+ LP  + +  +L +F   NN + +LPE++   + + KL
Sbjct: 271 LPKEIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLENNRLRNLPEEIGQLANLQKL 330

Query: 166 DVEGNKLTVLSNNLIASW 183
            +E N+ +      I  W
Sbjct: 331 YLEHNRFSKAKQRKIRQW 348



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 113/249 (45%), Gaps = 17/249 (6%)

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           S +  + +  + LTVLS+  IA +  L  L      L  +PE IG L  L  L L  +++
Sbjct: 49  SGLKSMVLRNDSLTVLSSR-IAEFKSLKRLTIECKQLKELPEEIGELENLEILTLSGSKL 107

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
            S+P SI     L    +    L +LP E+G L+ L  L +  NQL E   E  QL+ L 
Sbjct: 108 TSLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYKLRVGLNQLVELPKEIGQLKNLI 167

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENE 337
            L L+ N L  LP EIG +  L  L L GN L  L  S+ N      L+ L S  L  N 
Sbjct: 168 SLTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPKSIGN------LRELESLHLGYNN 221

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                   + L  +          L LE   L+A+P+ I    ++ K+ L  N +++LP 
Sbjct: 222 LKGLPDEIQQLTNLGW--------LYLENNQLTALPAGIGGLKKLKKMGLQDNRLRKLPK 273

Query: 398 ELSSCASLQ 406
           E+    +LQ
Sbjct: 274 EIGQLGNLQ 282



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 13/135 (9%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+L   +L+ +P+E+              +  +L  L L +N +  L   +  L  L  
Sbjct: 214 SLHLGYNNLKGLPDEIQ-------------QLTNLGWLYLENNQLTALPAGIGGLKKLKK 260

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           + +  N+L +LP  IG+L  L+ L++  N + ++P+EI   T+L +FD  +N+L+ LP  
Sbjct: 261 MGLQDNRLRKLPKEIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLENNRLRNLPEE 320

Query: 133 LGRCLNLSDFKASNN 147
           +G+  NL      +N
Sbjct: 321 IGQLANLQKLYLEHN 335


>gi|291224493|ref|XP_002732238.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 461

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 177/377 (46%), Gaps = 63/377 (16%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K  E  +LQKL L+ N I K+ + L  L  LT L + +N L+ +P  IG+L  +  L+++
Sbjct: 140 KIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEIGKLKNMNILNLT 199

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           FN I KIPD + +   L +     N L  +P  +G+  ++   K +NN I  +P+ L   
Sbjct: 200 FNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIEKIPDSLCAL 259

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++++L+V  N LT                         +P+ I  L  +  LDL  N I
Sbjct: 260 EQLTELNVRYNALT------------------------AIPDEITKLKSMKILDLSSNNI 295

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
             IP S+     L E YMG++AL+A+P E+ KL  +  LDL  ++  +     C L +L+
Sbjct: 296 AKIPDSLCALEQLTELYMGSDALTAIPDEITKLKSMKILDLSFSKFAKIPDSLCTLEQLT 355

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            L++  N+L+ +P EI K+ +L+ L L  N +  +  SL      AL             
Sbjct: 356 KLNMHYNALTAIPDEITKLKSLKILNLNHNNIAKIPDSLC-----AL------------- 397

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                  E L            EL++    L+AIP EI +   +  L+LS N I ++P  
Sbjct: 398 -------EQLT-----------ELNMVSNALTAIPDEISKLKSMKTLNLSFNKIAKIPDS 439

Query: 399 LSSCASLQVKFSDLVTN 415
           L  CA  Q+   D+++N
Sbjct: 440 L--CALEQLTELDMMSN 454



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 160/331 (48%), Gaps = 38/331 (11%)

Query: 77  HNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC 136
           +N L+ +P  IGE H L+ L +S N I KIPD +          C+  QL EL   +G  
Sbjct: 131 NNGLTIVPRKIGECHELQKLKLSSNKIAKIPDSL----------CALEQLTEL--YMGY- 177

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
                     N +T++P+++     M+ L++  NK+  + ++L A    LTEL    N L
Sbjct: 178 ----------NALTAIPDEIGKLKNMNILNLTFNKIAKIPDSLCA-LEQLTELYMEYNAL 226

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P+ IG L  +  L L+ N I  IP S+     L E  +  NAL+A+P E+ KL  + 
Sbjct: 227 TAIPDEIGKLKSMKILKLNNNNIEKIPDSLCALEQLTELNVRYNALTAIPDEITKLKSMK 286

Query: 257 TLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            LDL SN + +     C L +L+ L + +++L+ +P EI K+ +++ L L+ +    +  
Sbjct: 287 ILDLSSNNIAKIPDSLCALEQLTELYMGSDALTAIPDEITKLKSMKILDLSFSKFAKIPD 346

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
           SL           L      N    A T   D IT    L +    L+L   N++ IP  
Sbjct: 347 SLCT---------LEQLTKLNMHYNALTAIPDEITKLKSLKI----LNLNHNNIAKIPDS 393

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +    ++T+L++  N++  +P E+S   S++
Sbjct: 394 LCALEQLTELNMVSNALTAIPDEISKLKSMK 424



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 137/263 (52%), Gaps = 15/263 (5%)

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           NN +T +P  + +C ++ KL +  NK+  + ++L A    LTEL    N L  +P+ IG 
Sbjct: 131 NNGLTIVPRKIGECHELQKLKLSSNKIAKIPDSLCA-LEQLTELYMGYNALTAIPDEIGK 189

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  +  L+L  N+I  IP S+     L E YM  NAL+A+P E+GKL  +  L L++N +
Sbjct: 190 LKNMNILNLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNI 249

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
           ++     C L +L+ L++  N+L+ +P EI K+ +++ L L+ N +  +  SL      A
Sbjct: 250 EKIPDSLCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLC-----A 304

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           L +     +     S+A T   D IT    + +    L L     + IP  +    ++TK
Sbjct: 305 LEQLTELYM----GSDALTAIPDEITKLKSMKI----LDLSFSKFAKIPDSLCTLEQLTK 356

Query: 385 LDLSRNSIQELPPELSSCASLQV 407
           L++  N++  +P E++   SL++
Sbjct: 357 LNMHYNALTAIPDEITKLKSLKI 379



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 126/267 (47%), Gaps = 34/267 (12%)

Query: 14  LNLSNRSLRDVPN---------EVYKNFDE-AGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           LNL+   +  +P+         E+Y  ++      D+  +   ++ L L +NNIEK+ + 
Sbjct: 196 LNLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIEKIPDS 255

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD--------------- 108
           L  L  LT LNV +N L+ +P  I +L  +K LD+S N+I KIPD               
Sbjct: 256 LCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTELYMGS 315

Query: 109 --------EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
                   EI    ++   D S ++  ++P SL     L+      N +T++P+++    
Sbjct: 316 DALTAIPDEITKLKSMKILDLSFSKFAKIPDSLCTLEQLTKLNMHYNALTAIPDEITKLK 375

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            +  L++  N +  + ++L A    LTEL    N L  +P+ I  L  +  L+L  N+I 
Sbjct: 376 SLKILNLNHNNIAKIPDSLCA-LEQLTELNMVSNALTAIPDEISKLKSMKTLNLSFNKIA 434

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPA 247
            IP S+     L E  M +NAL+++P+
Sbjct: 435 KIPDSLCALEQLTELDMMSNALTSIPS 461


>gi|255070543|ref|XP_002507353.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
 gi|226522628|gb|ACO68611.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
          Length = 426

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 119/213 (55%), Gaps = 2/213 (0%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +PA +G L  L+ L +S N +  +P EIG  T+LVK     N+L  +P+ +G+  +L   
Sbjct: 205 VPAELGRLSALRKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRLTSVPAEIGQLTSLEGL 264

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              +N +TSLP ++   + +  L + GN+LT +    I   T LTEL  + N L  +P  
Sbjct: 265 WLRHNQLTSLPAEIGQLTALRVLLLYGNQLTSVPAE-IGQLTSLTELHLADNQLTSVPAE 323

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L+ L RL L  N++ S+P+ I    SL   Y+G N L+++PAE+G+L++L  L+L  
Sbjct: 324 IGQLTSLERLGLRDNQLTSVPAEIGQLTSLERLYLGGNRLTSVPAEIGQLTELKELNLEG 383

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEI 294
           NQL     E  QL  L  L L +N L+ +P  I
Sbjct: 384 NQLTSVPAEIGQLTSLERLYLGHNQLTSVPAVI 416



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 110/201 (54%), Gaps = 1/201 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L+ N +  +  ++  L  L  L +  N+L+ +PA IG+L  L+ L +  N +  +
Sbjct: 215 LRKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRLTSVPAEIGQLTSLEGLWLRHNQLTSL 274

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  TAL       NQL  +P+ +G+  +L++   ++N +TS+P ++   + + +L 
Sbjct: 275 PAEIGQLTALRVLLLYGNQLTSVPAEIGQLTSLTELHLADNQLTSVPAEIGQLTSLERLG 334

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT +    I   T L  L    N L  +P  IG L+ L  L+L  N++ S+P+ I
Sbjct: 335 LRDNQLTSVPAE-IGQLTSLERLYLGGNRLTSVPAEIGQLTELKELNLEGNQLTSVPAEI 393

Query: 227 SGCCSLAEFYMGNNALSALPA 247
               SL   Y+G+N L+++PA
Sbjct: 394 GQLTSLERLYLGHNQLTSVPA 414



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 129/240 (53%), Gaps = 18/240 (7%)

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++ +L++E   LT      +   + L +L  S+N L  +P  IG L+ L++L LH NR+
Sbjct: 189 GRVVELELEDVGLTGAVPAELGRLSALRKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRL 248

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
            S+P+ I    SL   ++ +N L++LPAE+G+L+ L  L L+ NQL     E  QL  L+
Sbjct: 249 TSVPAEIGQLTSLEGLWLRHNQLTSLPAEIGQLTALRVLLLYGNQLTSVPAEIGQLTSLT 308

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS--RLPEN 336
            L L++N L+ +P EIG++T+L +L L  N L ++         PA +  L S  RL   
Sbjct: 309 ELHLADNQLTSVPAEIGQLTSLERLGLRDNQLTSV---------PAEIGQLTSLERLYLG 359

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
            +   S   E  I   T L    KEL+LEG  L+++P+EI +   + +L L  N +  +P
Sbjct: 360 GNRLTSVPAE--IGQLTEL----KELNLEGNQLTSVPAEIGQLTSLERLYLGHNQLTSVP 413



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 24/180 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L HN +  L  ++  L  L VL +  N+L+ +PA IG+L  L  L ++ N +  +
Sbjct: 261 LEGLWLRHNQLTSLPAEIGQLTALRVLLLYGNQLTSVPAEIGQLTSLTELHLADNQLTSV 320

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG  T+L +     NQL  +P+ +G+  +L       N +TS+P ++   +++ +L+
Sbjct: 321 PAEIGQLTSLERLGLRDNQLTSVPAEIGQLTSLERLYLGGNRLTSVPAEIGQLTELKELN 380

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +EGN+LT                         +P  IG L+ L RL L  N++ S+P+ I
Sbjct: 381 LEGNQLT------------------------SVPAEIGQLTSLERLYLGHNQLTSVPAVI 416


>gi|421110748|ref|ZP_15571239.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803845|gb|EKS09972.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 291

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 122/240 (50%), Gaps = 27/240 (11%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           N+L+ LP  IG L  L+ L+++ N    +P+EIG+   L K D + ++L  LP  +G+  
Sbjct: 63  NQLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSRLTTLPKEIGKLQ 122

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
            L       N + +LP+++     +  L + GN+LT L                      
Sbjct: 123 KLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTL---------------------- 160

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ IG+L +L  LDL QN++ ++P  I     L   ++GNN L+ LP E+G L  L  
Sbjct: 161 --PKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQE 218

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L+SNQ      E   L+ L  L+LS NSL+  P EIGK+  L+ L L GNP   LRS 
Sbjct: 219 LNLNSNQFTTLPEEIGNLQSLESLNLSGNSLTSFPEEIGKLQKLKWLYLGGNPF--LRSQ 276



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 124/241 (51%), Gaps = 12/241 (4%)

Query: 34  EAGEGDKWW-------EAVDLQKLILA----HNNIEKLKEDLRNLPLLTVLNVSHNKLSE 82
           EA E DK++          D++ L L      N +  L +++ NL  L  LN++ N+ + 
Sbjct: 31  EADEKDKYYNLPEALQHPTDVRVLDLGPPEGGNQLTTLPKEIGNLQNLQELNLNSNQFTT 90

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG L  L+ LD++++ +  +P EIG    L K +   NQLK LP  +G+  NL + 
Sbjct: 91  LPEEIGNLQKLQKLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNL 150

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             + N +T+LP+++ +  K+  LD+  N+L  L    I     L  L    N L  +P+ 
Sbjct: 151 SLNGNELTTLPKEIGNLQKLQTLDLAQNQLKTLPKE-IEKLQKLEALHLGNNELTTLPKE 209

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG+L  L  L+L+ N+  ++P  I    SL    +  N+L++ P E+GKL KL  L L  
Sbjct: 210 IGNLQNLQELNLNSNQFTTLPEEIGNLQSLESLNLSGNSLTSFPEEIGKLQKLKWLYLGG 269

Query: 263 N 263
           N
Sbjct: 270 N 270



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 35/213 (16%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P+ IG+L  L  L+L+ N+  ++P  I     L +  +  + L+ LP E+GKL 
Sbjct: 63  NQLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSRLTTLPKEIGKLQ 122

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           KL  L+L+ NQLK                       LP EIGK+  L+ L L GN L TL
Sbjct: 123 KLQKLNLYKNQLKT----------------------LPKEIGKLQNLKNLSLNGNELTTL 160

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              + N     L K     L +N+        E L  +          L L    L+ +P
Sbjct: 161 PKEIGN-----LQKLQTLDLAQNQLKTLPKEIEKLQKLEA--------LHLGNNELTTLP 207

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            EI     + +L+L+ N    LP E+ +  SL+
Sbjct: 208 KEIGNLQNLQELNLNSNQFTTLPEEIGNLQSLE 240


>gi|418752849|ref|ZP_13309106.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966801|gb|EKO34641.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 398

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/292 (34%), Positives = 148/292 (50%), Gaps = 18/292 (6%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL-------LTVLNVSHNKL 80
           VY N  EA +        D+Q L L     +   + L  LP        L  L++S N+L
Sbjct: 94  VYYNLTEALQ-----HPTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQL 148

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
             LP  IG+L  L+ LD+S N +  +P EIG    L K + +SNQL  L   +G   NL 
Sbjct: 149 MTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQ 208

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNG 198
                 N +T+LPE++ +   +  LD+  N+LT L   +   W +  L  L   +N L  
Sbjct: 209 TLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEI---WNLQNLQTLDLGRNQLTT 265

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +PE IG+L  L  LDL  N++ ++P  I    +L +  +  N L+ LP E+GKL KL  L
Sbjct: 266 LPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTLPKEIGKLQKLKKL 325

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            L++N+L    +E   L +L  L L +N L+ LP EIG +  L+ L L GNP
Sbjct: 326 YLYNNRLTTLPIEIGNLQKLQTLSLGHNQLTTLPKEIGNLQKLKMLDLGGNP 377



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 104/209 (49%), Gaps = 25/209 (11%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   D SSNQL  LP  +G+  NL     S+N +T+LP+++     + KL
Sbjct: 128 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKL 187

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT LS                        + IG+L  L  LDL +N++ ++P  
Sbjct: 188 NLNSNQLTTLS------------------------KEIGNLQNLQTLDLGRNQLTTLPEE 223

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +G N L+ LP E+  L  L TLDL  NQL     E   L+ L  LDL  
Sbjct: 224 IWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEG 283

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N L+ LP EIG +  L+KL L GN L TL
Sbjct: 284 NQLATLPEEIGNLQNLQKLDLEGNQLTTL 312



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 120/250 (48%), Gaps = 37/250 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS+  L  +P E+              +  +LQKL L  N +  L +++ NL  L  L
Sbjct: 164 LDLSHNQLTTLPKEI-------------GQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTL 210

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+ LP  I  L  L++LD+  N +  +P+EI +   L   D   NQL  LP  +
Sbjct: 211 DLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEI 270

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   NL       N + +LPE++ +   + KLD+EGN+LT L                  
Sbjct: 271 GNLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTL------------------ 312

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+ IG L +L +L L+ NR+ ++P  I     L    +G+N L+ LP E+G L 
Sbjct: 313 ------PKEIGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQTLSLGHNQLTTLPKEIGNLQ 366

Query: 254 KLGTLDLHSN 263
           KL  LDL  N
Sbjct: 367 KLKMLDLGGN 376



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 126/287 (43%), Gaps = 61/287 (21%)

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S++ L  LP  +G+  NL D   S+N + +LP+++     + KLD+  N+LT L      
Sbjct: 121 SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTL------ 174

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
                             P+ IG L  L +L+L+ N++ ++   I    +L    +G N 
Sbjct: 175 ------------------PKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQ 216

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTL 300
           L+ LP E+  L  L TLDL  NQL     E   L+ L  LDL  N L+ LP EIG +  L
Sbjct: 217 LTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNL 276

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
           + L L GN L TL   + N      L+ L+                              
Sbjct: 277 QTLDLEGNQLATLPEEIGN------LQNLQ------------------------------ 300

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +L LEG  L+ +P EI +  ++ KL L  N +  LP E+ +   LQ 
Sbjct: 301 KLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQT 347



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 37/205 (18%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L    L  +P E+             W   +LQ L L  N +  L E++ NL  L  
Sbjct: 209 TLDLGRNQLTTLPEEI-------------WNLQNLQTLDLGRNQLTTLPEEIWNLQNLQT 255

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+ LP  IG L  L++LD+  N +  +P+EIG+   L K D   NQL  LP  
Sbjct: 256 LDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTLPKE 315

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+   L      NN +T+LP ++ +  K+  L +  N+LT L                 
Sbjct: 316 IGKLQKLKKLYLYNNRLTTLPIEIGNLQKLQTLSLGHNQLTTL----------------- 358

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQN 217
                  P+ IG+L +L  LDL  N
Sbjct: 359 -------PKEIGNLQKLKMLDLGGN 376


>gi|417765321|ref|ZP_12413285.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352503|gb|EJP04688.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 595

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 167/364 (45%), Gaps = 11/364 (3%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +D+  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKDIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L   P E+G+L  L  L    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLIVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+  P EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 287 NNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAENGV 340

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLS-AIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
            +   + +A    +   ELSLE  + S + P  I +   +  L+L       LP E+S  
Sbjct: 341 YRN--LNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRL 398

Query: 403 ASLQ 406
            +L+
Sbjct: 399 KNLK 402



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 126/278 (45%), Gaps = 38/278 (13%)

Query: 17  SNRSLRDVP-NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIE----KLKEDLRNLPLLT 71
           SN  LR+V  N VY+N + A E     E + + +L L + +      K+    RNL    
Sbjct: 328 SNLDLREVAENGVYRNLNLAQE-----EPLKVFELSLEYKDFSQSFPKVILKFRNL---R 379

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            LN+     S LP  I  L  LK L +  N +  IP EIG    L   +  +N+L+ LP 
Sbjct: 380 GLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPK 439

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 440 EIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 482

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++P+ I    +L E  + +N  + LP E+GK
Sbjct: 483 -------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGK 535

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
           L KL TLDL +NQL     E  QL+ L  L L NN  S
Sbjct: 536 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 164/390 (42%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N ++ 
Sbjct: 187 NLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLIV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 563



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 170/430 (39%), Gaps = 76/430 (17%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L +++  L  L  L++  N+L+  PA I EL  L+SLD+S N ++ 
Sbjct: 72  NLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLII 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L       N+L   P  +G+  NL     S N +T+LP+++     +  L
Sbjct: 132 LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTL 191

Query: 166 DVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGMPETI 203
           D++ N+ T L   +                      I     L EL    N L   P+ I
Sbjct: 192 DLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLIVFPKEI 251

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L  L  L   +NR+ ++P  +    +L    + NN L+  P E+G+L  L  L+L  N
Sbjct: 252 GQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN 311

Query: 264 QL----------------------------------KEYCVEACQLRLSVLDLSNNSLSG 289
            L                                  +E  ++  +L L   D S      
Sbjct: 312 PLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFS----QS 367

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP--ENEDSEASTTK-- 345
            P  I K   LR L L      TL   +        LKYL   L   +N  SE    K  
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKN---LKYLALGLNGLKNIPSEIGQLKNL 424

Query: 346 EDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           E L   A  L    KE         LSL    L   P+EI +  ++ KLDLS N     P
Sbjct: 425 EALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFP 484

Query: 397 PELSSCASLQ 406
            E+    +LQ
Sbjct: 485 KEIGKLENLQ 494


>gi|417402294|gb|JAA47999.1| Putative leucine-rich repeat-containing protein 1 [Desmodus
           rotundus]
          Length = 524

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLQNLLCLDVSENKLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPET-VGDCESLTELVLTENRLPALPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 189/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 136 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +N++  +P  ISG  SL +  +  N 
Sbjct: 195 ALLHLKDLWLDGNQLSELPQEIGNLQNLLCLDVSENKLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL KL                      S+L +  N L+ LP  +G   +L 
Sbjct: 255 LETIPDGIGKLKKL----------------------SILKVDQNRLTQLPETVGDCESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L  L  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 293 ELVLTENRLPALPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 340 FCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTA 379



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 157/332 (47%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQIADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLQNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L T+  
Sbjct: 223 ------------LC----------LDVSENKLERLPEEISGLTSLTDLVISQNLLETIPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL     ++   T  D  ++         EL L    L A+P  
Sbjct: 261 GIGKLKKLSILKVDQNRL-----TQLPETVGDCESLT--------ELVLTENRLPALPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 308 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLQNLLCLDVSENKLERLPEEISGLTSL----TDLVISQ 252


>gi|434403391|ref|YP_007146276.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
 gi|428257646|gb|AFZ23596.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
          Length = 938

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 141/293 (48%), Gaps = 25/293 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L+ N +  L + +  L  L+ L +SHN ++ LP AI +L  L SLD+S+N I  +
Sbjct: 50  LEELDLSRNEMTTLPDAIAKLQNLSTLYLSHNGITTLPDAIAQLQNLNSLDLSYNGITTL 109

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD I     L   + S N++  LP ++ +  NL+    S N I +LP+ +A    ++ L+
Sbjct: 110 PDAIAKLHNLTTLNLSVNKITTLPDAIAKLHNLTTLNLSVNRIRTLPDAIAKLHNLTSLN 169

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN++T L                        P+ I  L  L  LDL  NRI ++P +I
Sbjct: 170 LNGNRITTL------------------------PDAIAKLHNLTSLDLSGNRITTLPDAI 205

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
           +   +L    + NN ++ LP  + KL  L +LDL  N++        +L+ LS LDL  N
Sbjct: 206 AKLHNLTSLSLWNNGITTLPDAIAKLHNLTSLDLSGNRITTLPDAIAKLQNLSTLDLRGN 265

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            ++ LP  I ++  L  L L  NP+      +V     A+  Y R    E  D
Sbjct: 266 EITTLPDAIAQLHNLTSLDLRRNPIEKPPLEVVKKGIEAIRDYFRQLEAEGTD 318



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 126/229 (55%), Gaps = 1/229 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L+HN I  L + +  L  L  L++S+N ++ LP AI +LH L +L++S N I  
Sbjct: 72  NLSTLYLSHNGITTLPDAIAQLQNLNSLDLSYNGITTLPDAIAKLHNLTTLNLSVNKITT 131

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PD I     L   + S N+++ LP ++ +  NL+    + N IT+LP+ +A    ++ L
Sbjct: 132 LPDAIAKLHNLTTLNLSVNRIRTLPDAIAKLHNLTSLNLNGNRITTLPDAIAKLHNLTSL 191

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+ GN++T L  + IA    LT L    N +  +P+ I  L  L  LDL  NRI ++P +
Sbjct: 192 DLSGNRITTLP-DAIAKLHNLTSLSLWNNGITTLPDAIAKLHNLTSLDLSGNRITTLPDA 250

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           I+   +L+   +  N ++ LP  + +L  L +LDL  N +++  +E  +
Sbjct: 251 IAKLQNLSTLDLRGNEITTLPDAIAQLHNLTSLDLRRNPIEKPPLEVVK 299



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 117/258 (45%), Gaps = 38/258 (14%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T +P ++   + + +LD+  N++T L +  IA    L+ L  S N +  +P+ I  L  
Sbjct: 37  LTEIPAEVFALTWLEELDLSRNEMTTLPD-AIAKLQNLSTLYLSHNGITTLPDAIAQLQN 95

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  LDL  N I ++P +I+   +L    +  N ++ LP  + KL  L TL+L  N+++  
Sbjct: 96  LNSLDLSYNGITTLPDAIAKLHNLTTLNLSVNKITTLPDAIAKLHNLTTLNLSVNRIRTL 155

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                +L  L+ L+L+ N ++ LP  I K+  L  L L+GN + TL  ++      A L 
Sbjct: 156 PDAIAKLHNLTSLNLNGNRITTLPDAIAKLHNLTSLDLSGNRITTLPDAI------AKLH 209

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            L S                              LSL    ++ +P  I +   +T LDL
Sbjct: 210 NLTS------------------------------LSLWNNGITTLPDAIAKLHNLTSLDL 239

Query: 388 SRNSIQELPPELSSCASL 405
           S N I  LP  ++   +L
Sbjct: 240 SGNRITTLPDAIAKLQNL 257



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 14/214 (6%)

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           K+ L  +P  + +L+ L  LDL +N + ++P +I+   +L+  Y+ +N ++ LP  + +L
Sbjct: 34  KDKLTEIPAEVFALTWLEELDLSRNEMTTLPDAIAKLQNLSTLYLSHNGITTLPDAIAQL 93

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L +LDL  N +        +L  L+ L+LS N ++ LP  I K+  L  L L+ N +R
Sbjct: 94  QNLNSLDLSYNGITTLPDAIAKLHNLTTLNLSVNKITTLPDAIAKLHNLTTLNLSVNRIR 153

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           TL         P  +  L +    N +    TT  D I     L+     L L G  ++ 
Sbjct: 154 TL---------PDAIAKLHNLTSLNLNGNRITTLPDAIAKLHNLT----SLDLSGNRITT 200

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +P  I +   +T L L  N I  LP  ++   +L
Sbjct: 201 LPDAIAKLHNLTSLSLWNNGITTLPDAIAKLHNL 234


>gi|254410565|ref|ZP_05024344.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196182771|gb|EDX77756.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1117

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 16/312 (5%)

Query: 1   MDRILKAARTSGS-LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEK 59
           ++ I KAAR   + L+LS + + ++P  +              +  +LQ+L L  N I +
Sbjct: 8   LEIIEKAAREGVTELDLSGKGITEIPECIG-------------QLTNLQELDLRENQITE 54

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           + E +  L  L  L +  NK++E+P  I +L  L+ L +  N I +IP+ IG  T L K 
Sbjct: 55  IPECIGQLTNLKKLIIGKNKITEIPGCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKL 114

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
             S+NQ+ E+P  +G   NL     S N IT +PE ++  + +  L +  NK+T +    
Sbjct: 115 SLSANQITEIPKFIGYLNNLQLLGLSRNQITEIPECISQLTNLQNLYLHDNKITEIP-EC 173

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I   T L  L+   N +  +PE IG L+ L  L L  N+I  IP  I    +L   Y G 
Sbjct: 174 IGQLTNLQNLVLIGNQITEIPEFIGKLTNLQNLGLTGNQITEIPEFIGKLTNLQLLYFGG 233

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N ++ +P  +G+L+ L  L+L  NQ+ E      QL  L +L+L  N ++ +P  IG++ 
Sbjct: 234 NQITEMPECIGQLNNLQILNLWKNQITEMPECIGQLNNLQILNLWKNQITEIPECIGQLN 293

Query: 299 TLRKLLLTGNPL 310
            L++L L  N +
Sbjct: 294 NLQELDLDDNKI 305



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 158/338 (46%), Gaps = 15/338 (4%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           +T L++S   ++E+P  IG+L  L+ LD+  N I +IP+ IG  T L K     N++ E+
Sbjct: 19  VTELDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKLIIGKNKITEI 78

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  + +  NL       N IT +PE +   + + KL +  N++T +    I     L  L
Sbjct: 79  PGCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPK-FIGYLNNLQLL 137

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S+N +  +PE I  L+ L  L LH N+I  IP  I    +L    +  N ++ +P  +
Sbjct: 138 GLSRNQITEIPECISQLTNLQNLYLHDNKITEIPECIGQLTNLQNLVLIGNQITEIPEFI 197

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           GKL+ L  L L  NQ+ E      +L  L +L    N ++ +P  IG++  L+ L L  N
Sbjct: 198 GKLTNLQNLGLTGNQITEIPEFIGKLTNLQLLYFGGNQITEMPECIGQLNNLQILNLWKN 257

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            +  +   +       +L   ++++         T   + I     L    +EL L+   
Sbjct: 258 QITEMPECIGQLNNLQILNLWKNQI---------TEIPECIGQLNNL----QELDLDDNK 304

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           ++ IP  I +   + +L L+ N I E+P  +    +LQ
Sbjct: 305 ITEIPECIGQLINLQELSLTENQITEIPECIGQLTNLQ 342



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 128/315 (40%), Gaps = 61/315 (19%)

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           E  +   + + D S   + E+P  +G+  NL +     N IT +PE +   + + KL + 
Sbjct: 12  EKAAREGVTELDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKLIIG 71

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            NK+T +    I+  T L  L   +N +  +PE IG L+ L +L L  N+I  IP  I  
Sbjct: 72  KNKITEIPG-CISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPKFIGY 130

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 288
             +L    +  N ++ +P  + +L+ L  L LH N++ E                     
Sbjct: 131 LNNLQLLGLSRNQITEIPECISQLTNLQNLYLHDNKITE--------------------- 169

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            +P  IG++T L+ L+L GN +                    + +PE             
Sbjct: 170 -IPECIGQLTNLQNLVLIGNQI--------------------TEIPE------------F 196

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV- 407
           I   T L    + L L G  ++ IP  I +   +  L    N I E+P  +    +LQ+ 
Sbjct: 197 IGKLTNL----QNLGLTGNQITEIPEFIGKLTNLQLLYFGGNQITEMPECIGQLNNLQIL 252

Query: 408 -KFSDLVTNKESCIS 421
             + + +T    CI 
Sbjct: 253 NLWKNQITEMPECIG 267



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 73/127 (57%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L    N I ++ E +  L  L +LN+  N+++E+P  IG+L+ L+ L++  N I +
Sbjct: 225 NLQLLYFGGNQITEMPECIGQLNNLQILNLWKNQITEMPECIGQLNNLQILNLWKNQITE 284

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP+ IG    L + D   N++ E+P  +G+ +NL +   + N IT +PE +   + + KL
Sbjct: 285 IPECIGQLNNLQELDLDDNKITEIPECIGQLINLQELSLTENQITEIPECIGQLTNLQKL 344

Query: 166 DVEGNKL 172
            ++ N L
Sbjct: 345 ILDNNPL 351


>gi|395860100|ref|XP_003802353.1| PREDICTED: protein scribble homolog isoform 2 [Otolemur garnettii]
          Length = 1641

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 169/358 (47%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +P +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVPEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 323 HLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTH 379



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  +PE + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E  EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVPEAIGDCENL-----------SELILTENLLTALPH 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339


>gi|395860098|ref|XP_003802352.1| PREDICTED: protein scribble homolog isoform 1 [Otolemur garnettii]
          Length = 1616

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 169/358 (47%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +P +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVPEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 323 HLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTH 379



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  +PE + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E  EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVPEAIGDCENL-----------SELILTENLLTALPH 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339


>gi|418678095|ref|ZP_13239369.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418684289|ref|ZP_13245475.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418741009|ref|ZP_13297385.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400321285|gb|EJO69145.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410741181|gb|EKQ85893.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410751604|gb|EKR08581.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 354

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 6   KAARTSGS---LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           KA + S +   L+LS ++L   P E+  +KN               LQKL L+ N +  L
Sbjct: 35  KALQNSSNVRVLDLSFQNLTSFPKEIGQFKN---------------LQKLDLSGNELTVL 79

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +++  L  L  L++  NKL+ LP  I +L  LK+LD+  N +M +P E+     L K +
Sbjct: 80  SKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLN 139

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S N+L  +P  +G+  NL   K  +N I SLP+++    ++ +L +E N+   +    +
Sbjct: 140 LSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEAL 199

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                L +L  S+N L  +P+ I  L  L  L L +N+I  +P+ +    +L E Y+  N
Sbjct: 200 -QLKNLQKLNLSENQLVSIPKEILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSEN 258

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
             ++LP E+ KL  L  L L +N+L     E  QL+ L  L+L NN L+ LP EIG++  
Sbjct: 259 QFTSLPKEIDKLKNLRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLKN 318

Query: 300 LRKLLLTGNPL 310
           L++L L  NP 
Sbjct: 319 LQRLELDSNPF 329



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 144/315 (45%), Gaps = 38/315 (12%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+SF ++   P EIG    L K D S N+L  L   + +  NL +    +N +T+L
Sbjct: 43  VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+L  +   ++   T L +L  S N LN +P+ IG L  L  L
Sbjct: 103 PKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQT-LEKLNLSLNRLNAVPKEIGQLKNLQIL 161

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  N+I+S+P  I G   L E  + NN    +P E  +L  L  L+L  NQL     E 
Sbjct: 162 KLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEI 221

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  L L  N ++ LP E+ ++  L++L L+ N   +L   +        LK LR 
Sbjct: 222 LQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDK------LKNLRW 275

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                         LSL+   L+ +P EI +   + +L+L  N 
Sbjct: 276 ------------------------------LSLKNNRLTTLPKEIGQLKNLQRLELGNNQ 305

Query: 392 IQELPPELSSCASLQ 406
           +  LP E+    +LQ
Sbjct: 306 LTNLPKEIGQLKNLQ 320


>gi|301775170|ref|XP_002923003.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1-like [Ailuropoda melanoleuca]
          Length = 521

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 190/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 26  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVKLRKLGLSDNEIQRLP 72

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++P+       L     
Sbjct: 73  PEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSV 132

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 133 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPES-IG 191

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 192 ALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 251

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL KL                      S+L +  N L+ LP  +G   +L 
Sbjct: 252 LEMIPDGIGKLKKL----------------------SILKVDQNRLTQLPEAVGDCESLT 289

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L + L  + +   S  KE  I     L+V    
Sbjct: 290 ELVLTENRLLTLPKSI------GKLKKLNN-LNADRNKLVSLPKE--IGGCCSLTV---- 336

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    LS IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 337 FCVRDNRLSRIPAEVSQATELHVLDVAGNRLLHLPLSLTA 376



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 149 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 208

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N +  +P+ +    K+S L
Sbjct: 209 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSIL 268

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 269 KVDQNRLTQLPEA-VGDCESLTELVLTENRLLTLPKSIGKLKKLNNLNADRNKLVSLPKE 327

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N LS +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 328 IGGCCSLTVFCVRDNRLSRIPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 387

Query: 286 S 286
            
Sbjct: 388 Q 388



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 153/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 43  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 102

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 103 ALQIADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 159

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 160 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 219

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L  +  
Sbjct: 220 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPD 257

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E L            EL L    L  +P  
Sbjct: 258 GIGKLKKLSILKVDQNRL--TQLPEAVGDCESLT-----------ELVLTENRLLTLPKS 304

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  ++  L+  RN +  LP E+  C SL V
Sbjct: 305 IGKLKKLNNLNADRNKLVSLPKEIGGCCSLTV 336



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 35  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 94

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 95  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 154

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 155 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 201

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 202 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 249


>gi|195110657|ref|XP_001999896.1| GI22824 [Drosophila mojavensis]
 gi|193916490|gb|EDW15357.1| GI22824 [Drosophila mojavensis]
          Length = 471

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 137/265 (51%), Gaps = 25/265 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+ L L  N++  L E LRN   L VL++ HNKL+E+P  I +L  L +L + FN I 
Sbjct: 179 VNLRNLALNENSLTSLPESLRNCTQLKVLDLRHNKLAEIPPVIYQLRSLTTLYLRFNRIT 238

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            + D++     L       N++KEL S++G  +NL+    S+N +  LP+D+ +C  ++ 
Sbjct: 239 AVADDLRQLVNLTMLSLRENKIKELGSAIGSLVNLTTLDVSHNHLEHLPDDIGNCVNLNA 298

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N+L  + +++      L  LI S N+L  +P TIG+L +L  LDL +NRI  +P 
Sbjct: 299 LDLQHNELLDIPDSI---GNNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPH 355

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            +     L    +  N ++ LP  +G LS                       L+ L +S 
Sbjct: 356 EVGLLHELQRLILQTNQITMLPRSIGHLSN----------------------LTHLSVSE 393

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNP 309
           N+L  LP EIG + +L  L +  NP
Sbjct: 394 NNLQFLPEEIGSLESLENLYINQNP 418



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 4/271 (1%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
            + ++ L L+ ++I  L   +R    LT L +  NK+ +LPA IG L  L++L ++ NS+
Sbjct: 132 GIRIKLLDLSKSSITVLPTTVRECVHLTELYLYSNKIVQLPAEIGCLVNLRNLALNENSL 191

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             +P+ + + T L   D   N+L E+P  + +  +L+      N IT++ +DL     ++
Sbjct: 192 TSLPESLRNCTQLKVLDLRHNKLAEIPPVIYQLRSLTTLYLRFNRITAVADDLRQLVNLT 251

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            L +  NK+  L +  I S   LT L  S N L  +P+ IG+   L  LDL  N +L IP
Sbjct: 252 MLSLRENKIKELGSA-IGSLVNLTTLDVSHNHLEHLPDDIGNCVNLNALDLQHNELLDIP 310

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
            SI    +L    + NN L  +P  +G L KL  LDL  N+++    E   L  L  L L
Sbjct: 311 DSIGN--NLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEVGLLHELQRLIL 368

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
             N ++ LP  IG ++ L  L ++ N L+ L
Sbjct: 369 QTNQITMLPRSIGHLSNLTHLSVSENNLQFL 399



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 14/247 (5%)

Query: 14  LNLSNRSLRDVPNEVYK---------NFDE-AGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           L+L +  L ++P  +Y+          F+      D   + V+L  L L  N I++L   
Sbjct: 207 LDLRHNKLAEIPPVIYQLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIKELGSA 266

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + +L  LT L+VSHN L  LP  IG    L +LD+  N ++ IPD IG+   ++    S+
Sbjct: 267 IGSLVNLTTLDVSHNHLEHLPDDIGNCVNLNALDLQHNELLDIPDSIGNNLEILIL--SN 324

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N LK++P+++G    L       N I  LP ++    ++ +L ++ N++T+L  + I   
Sbjct: 325 NMLKKIPNTIGNLRKLRILDLEENRIEVLPHEVGLLHELQRLILQTNQITMLPRS-IGHL 383

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNAL 242
           + LT L  S+N L  +PE IGSL  L  L ++QN  L  +P  ++ C +L    +    L
Sbjct: 384 SNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPL 443

Query: 243 SALPAEL 249
             +P E+
Sbjct: 444 GTIPPEI 450



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 109/259 (42%), Gaps = 40/259 (15%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           IT LP  + +C  +++L +  NK+  L    I     L  L  ++N L  +PE++ + ++
Sbjct: 145 ITVLPTTVRECVHLTELYLYSNKIVQLPAE-IGCLVNLRNLALNENSLTSLPESLRNCTQ 203

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  LDL  N++  IP  I    SL   Y+  N ++A+  +L +L  L  L L  N++KE 
Sbjct: 204 LKVLDLRHNKLAEIPPVIYQLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIKEL 263

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                 L  L+ LD+S+N L  LP +IG    L  L L  N L  +  S+ N        
Sbjct: 264 GSAIGSLVNLTTLDVSHNHLEHLPDDIGNCVNLNALDLQHNELLDIPDSIGNN------- 316

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                             E LI              L    L  IP+ I    ++  LDL
Sbjct: 317 -----------------LEILI--------------LSNNMLKKIPNTIGNLRKLRILDL 345

Query: 388 SRNSIQELPPELSSCASLQ 406
             N I+ LP E+     LQ
Sbjct: 346 EENRIEVLPHEVGLLHELQ 364



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 39/200 (19%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           R+  LDL ++ I  +P+++  C  L E Y+ +N +  LPAE+G L  L  L L+ N L  
Sbjct: 134 RIKLLDLSKSSITVLPTTVRECVHLTELYLYSNKIVQLPAEIGCLVNLRNLALNENSLTS 193

Query: 268 Y--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
               +  C  +L VLDL +N L+ +PP I ++ +L  L                      
Sbjct: 194 LPESLRNCT-QLKVLDLRHNKLAEIPPVIYQLRSLTTL---------------------- 230

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
             YLR        +  +   +DL     R  V    LSL    +  + S I     +T L
Sbjct: 231 --YLRF-------NRITAVADDL-----RQLVNLTMLSLRENKIKELGSAIGSLVNLTTL 276

Query: 386 DLSRNSIQELPPELSSCASL 405
           D+S N ++ LP ++ +C +L
Sbjct: 277 DVSHNHLEHLPDDIGNCVNL 296


>gi|358339444|dbj|GAA47507.1| leucine-rich repeat protein soc-2 homolog [Clonorchis sinensis]
          Length = 620

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 157/309 (50%), Gaps = 29/309 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIMK 105
           L+ L L  N +  +   + NL  LT L +  N L ++LP  IG+L  L +LD+S N I  
Sbjct: 229 LKSLFLKFNKLSNIS-GIENLKHLTCLVLGQNSLKNDLPDVIGQLTCLTTLDLSNNQITS 287

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+ IG+ TAL   +   NQL+ LP+S+G   NLS      N +  +P+ LA+C  + + 
Sbjct: 288 LPENIGNCTALKSLNLQHNQLQRLPNSIGNLRNLSKLSIKYNQLVEIPQSLANCVLLDEF 347

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSLSRLIRLDLHQNRILSIPS 224
           +VE N+L+ L + L+ S   L  +  S+N     P    G     I L++  N+I +IP 
Sbjct: 348 NVESNQLSSLPDELLLSLPNLVNITLSRNHFTDFPTGGPGQFKNCISLNVDYNQITTIPQ 407

Query: 225 SISG---------------CC----------SLAEFYMGNNALSALPAELGKLSKLGTLD 259
           SI                  C          S+ E  +G+N L++LPAE+G+L  L  L+
Sbjct: 408 SIFSEATRLNRLNLCDNNITCLVPSDLHHWSSVVELNLGSNRLTSLPAEIGELQHLEVLE 467

Query: 260 LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           L+ NQL+    E  +L +L +L L +N L  LP ++  + +L++L +  N L T   S+ 
Sbjct: 468 LNFNQLRVLPDEITKLSKLRILGLDSNELESLPEDLSGLVSLQELNVLSNRLTTFPRSVE 527

Query: 319 NGPTPALLK 327
           N P   ++K
Sbjct: 528 NLPKLKVIK 536



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 190/433 (43%), Gaps = 90/433 (20%)

Query: 50  LILAHNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           L L+H  +++L   +  +LP LT L +  NKL+ LPA+IG+L  L+ L +  N + ++P 
Sbjct: 138 LDLSHCELQQLPNGIFDDLPGLTELYLYTNKLTSLPASIGQLAHLRRLSIQQNMLARLPK 197

Query: 109 EIGSATALVKFDCSSN--------------QLKELPSSLGRCLNLSDFK----------A 144
           E+   T L   D   N              QLK L     +  N+S  +           
Sbjct: 198 EMAKLTGLEVLDLRHNRLEGNLPECLPSLKQLKSLFLKFNKLSNISGIENLKHLTCLVLG 257

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
            N+    LP+ +   + ++ LD+  N++T L  N I + T L  L    N L  +P +IG
Sbjct: 258 QNSLKNDLPDVIGQLTCLTTLDLSNNQITSLPEN-IGNCTALKSLNLQHNQLQRLPNSIG 316

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL--------------- 249
           +L  L +L +  N+++ IP S++ C  L EF + +N LS+LP EL               
Sbjct: 317 NLRNLSKLSIKYNQLVEIPQSLANCVLLDEFNVESNQLSSLPDELLLSLPNLVNITLSRN 376

Query: 250 ----------GKLSKLGTLDLHSNQL----KEYCVEACQL-RLSV--------------- 279
                     G+     +L++  NQ+    +    EA +L RL++               
Sbjct: 377 HFTDFPTGGPGQFKNCISLNVDYNQITTIPQSIFSEATRLNRLNLCDNNITCLVPSDLHH 436

Query: 280 ------LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
                 L+L +N L+ LP EIG++  L  L L  N LR L   +         K  + R+
Sbjct: 437 WSSVVELNLGSNRLTSLPAEIGELQHLEVLELNFNQLRVLPDEIT--------KLSKLRI 488

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
              + +E  +  EDL  +     V+ +EL++    L+  P  +    ++  +    N IQ
Sbjct: 489 LGLDSNELESLPEDLSGL-----VSLQELNVLSNRLTTFPRSVENLPKLKVIKAGENDIQ 543

Query: 394 ELPPELSSCASLQ 406
            LPPEL + ++LQ
Sbjct: 544 RLPPELGNMSALQ 556



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 136/293 (46%), Gaps = 38/293 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL +  L+ +PN +                 +L KL + +N + ++ + L N  LL  
Sbjct: 300 SLNLQHNQLQRLPNSI-------------GNLRNLSKLSIKYNQLVEIPQSLANCVLLDE 346

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS- 131
            NV  N+LS LP  +               ++ +P+       LV    S N   + P+ 
Sbjct: 347 FNVESNQLSSLPDEL---------------LLSLPN-------LVNITLSRNHFTDFPTG 384

Query: 132 SLGRCLNLSDFKASNNCITSLPEDL-ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
             G+  N        N IT++P+ + ++ +++++L++  N +T L  + +  W+ + EL 
Sbjct: 385 GPGQFKNCISLNVDYNQITTIPQSIFSEATRLNRLNLCDNNITCLVPSDLHHWSSVVELN 444

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
              N L  +P  IG L  L  L+L+ N++  +P  I+    L    + +N L +LP +L 
Sbjct: 445 LGSNRLTSLPAEIGELQHLEVLELNFNQLRVLPDEITKLSKLRILGLDSNELESLPEDLS 504

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 302
            L  L  L++ SN+L  +      L +L V+    N +  LPPE+G M+ L++
Sbjct: 505 GLVSLQELNVLSNRLTTFPRSVENLPKLKVIKAGENDIQRLPPELGNMSALQE 557



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 134/304 (44%), Gaps = 49/304 (16%)

Query: 152 LPEDLADC--SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           L  +LA+C  SK + LD+   +L  L N +      LTEL    N L  +P +IG L+ L
Sbjct: 123 LYRELAECRESKNNVLDLSHCELQQLPNGIFDDLPGLTELYLYTNKLTSLPASIGQLAHL 182

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEY 268
            RL + QN +  +P  ++    L    + +N L   LP  L  L +L +L L  N+L   
Sbjct: 183 RRLSIQQNMLARLPKEMAKLTGLEVLDLRHNRLEGNLPECLPSLKQLKSLFLKFNKLSNI 242

Query: 269 ----------CVEACQ--LR------------LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
                     C+   Q  L+            L+ LDLSNN ++ LP  IG  T L+ L 
Sbjct: 243 SGIENLKHLTCLVLGQNSLKNDLPDVIGQLTCLTTLDLSNNQITSLPENIGNCTALKSLN 302

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKEL 362
           L  N L+ L +S+ N      L+ L         S+ S     L+ +   L+  V   E 
Sbjct: 303 LQHNQLQRLPNSIGN------LRNL---------SKLSIKYNQLVEIPQSLANCVLLDEF 347

Query: 363 SLEGMNLSAIPSE-IWEAGEITKLDLSRNSIQELPP----ELSSCASLQVKFSDLVTNKE 417
           ++E   LS++P E +     +  + LSRN   + P     +  +C SL V ++ + T  +
Sbjct: 348 NVESNQLSSLPDELLLSLPNLVNITLSRNHFTDFPTGGPGQFKNCISLNVDYNQITTIPQ 407

Query: 418 SCIS 421
           S  S
Sbjct: 408 SIFS 411



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 76/194 (39%), Gaps = 48/194 (24%)

Query: 41  WWEAVDLQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           + EA  L +L L  NNI  L   DL +   +  LN+  N+L+ LPA IGEL  L+ L+++
Sbjct: 410 FSEATRLNRLNLCDNNITCLVPSDLHHWSSVVELNLGSNRLTSLPAEIGELQHLEVLELN 469

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQL--------------------------------- 126
           FN +  +PDEI   + L      SN+L                                 
Sbjct: 470 FNQLRVLPDEITKLSKLRILGLDSNELESLPEDLSGLVSLQELNVLSNRLTTFPRSVENL 529

Query: 127 -------------KELPSSLGRCLNLSD-FKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
                        + LP  LG    L +     N  + SLP +L+ C  +  L +E   L
Sbjct: 530 PKLKVIKAGENDIQRLPPELGNMSALQELHLNDNLNLNSLPVELSLCKNLKILSLENCPL 589

Query: 173 TVLSNNLIASWTML 186
             +  N++   + +
Sbjct: 590 RDIERNVVEGGSAM 603


>gi|61806462|ref|NP_001013463.1| leucine-rich repeat-containing protein 1 [Danio rerio]
 gi|60551959|gb|AAH90814.1| Zgc:101523 [Danio rerio]
          Length = 526

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 125/241 (51%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L+V  N+L  LP  IG L  LK L +  N +  
Sbjct: 152 NLVSLELRENLLTYLPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSD 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E+GS  +L   D S N+L+ LP  +G  L+L+D   S N I  LPE +    ++S L
Sbjct: 212 IPAEVGSMRSLTCLDVSENKLERLPEEMGNLLSLTDLLVSQNLIDLLPEGIGKLKRLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
             + N+L  L  + I     LTEL+ ++N L  +P +IG L +L   +  +NR+ S+P  
Sbjct: 272 KADQNRLVQLPES-IGHCESLTELVLTENQLVNLPRSIGKLKKLSNFNCDRNRLASLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL    +  N L  +P EL + S+L  LDL  N+L    +    LRL  L LS N
Sbjct: 331 IGGCCSLNVLCVRENRLMRIPPELSQASELHVLDLSGNRLLYLPLTLTSLRLKALWLSEN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 155/322 (48%), Gaps = 40/322 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LS+  ++ +P ++  NF++  E D            ++ N+I +L E +     L V 
Sbjct: 64  LGLSDNEIQRLPGDI-ANFNQLVELD------------ISRNDIMELPESISYCKTLQVA 110

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV---------------- 117
           + S N L+ LP +  EL  L  L ++  S+  +PD IG+   LV                
Sbjct: 111 DFSGNPLTRLPESFPELRNLACLSINDISLQALPDNIGNLCNLVSLELRENLLTYLPESL 170

Query: 118 -------KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
                  + D  SN+L  LP ++G  ++L D     N ++ +P ++     ++ LDV  N
Sbjct: 171 SQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSDIPAEVGSMRSLTCLDVSEN 230

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           KL  L   +  +   LT+L+ S+NL++ +PE IG L RL  L   QNR++ +P SI  C 
Sbjct: 231 KLERLPEEM-GNLLSLTDLLVSQNLIDLLPEGIGKLKRLSILKADQNRLVQLPESIGHCE 289

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLS 288
           SL E  +  N L  LP  +GKL KL   +   N+L     E   C   L+VL +  N L 
Sbjct: 290 SLTELVLTENQLVNLPRSIGKLKKLSNFNCDRNRLASLPKEIGGC-CSLNVLCVRENRLM 348

Query: 289 GLPPEIGKMTTLRKLLLTGNPL 310
            +PPE+ + + L  L L+GN L
Sbjct: 349 RIPPELSQASELHVLDLSGNRL 370



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 179/391 (45%), Gaps = 50/391 (12%)

Query: 39  DKWWEAVDLQK--LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           ++  EA+D +   L+   + I + +  L  L L        N+L +LP     L  L+ L
Sbjct: 11  NRHIEAIDRRHCSLLFVPDEIYRYRGSLEELLL------DANQLRDLPKPFFNLTKLRKL 64

Query: 97  DVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDFKASNNCITSLPE 154
            +S N I ++P +I +   LV+ D S N + ELP S+  C  L ++DF  S N +T LPE
Sbjct: 65  GLSDNEIQRLPGDIANFNQLVELDISRNDIMELPESISYCKTLQVADF--SGNPLTRLPE 122

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
              +   ++ L +    L  L +N I +   L  L   +NLL  +PE++  L +L  LD+
Sbjct: 123 SFPELRNLACLSINDISLQALPDN-IGNLCNLVSLELRENLLTYLPESLSQLQKLEELDV 181

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             N + ++P +I    SL + ++  N LS +PAE+G +  L  LD+  N+L+    E   
Sbjct: 182 GSNELYNLPETIGCLVSLKDLWLDGNQLSDIPAEVGSMRSLTCLDVSENKLERLPEEMGN 241

Query: 275 L------------------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L                        RLS+L    N L  LP  IG   +L +L+LT N L
Sbjct: 242 LLSLTDLLVSQNLIDLLPEGIGKLKRLSILKADQNRLVQLPESIGHCESLTELVLTENQL 301

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L  S+      +     R+RL       AS  KE  I     L+V    L +    L 
Sbjct: 302 VNLPRSIGKLKKLSNFNCDRNRL-------ASLPKE--IGGCCSLNV----LCVRENRLM 348

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
            IP E+ +A E+  LDLS N +  LP  L+S
Sbjct: 349 RIPPELSQASELHVLDLSGNRLLYLPLTLTS 379



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 100/221 (45%), Gaps = 14/221 (6%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +P+   +L++L +L L  N I  +P  I+    L E  +  N +  L
Sbjct: 38  LEELLLDANQLRDLPKPFFNLTKLRKLGLSDNEIQRLPGDIANFNQLVELDISRNDIMEL 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +LR L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISYCKTLQVADFSGNPLTRLPESFPELRNLACLSINDISLQALPDNIGNLCNLVSLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL             S+L + E+ +  + +   +       V+ K+L L
Sbjct: 158 LRENLLTYLPESL-------------SQLQKLEELDVGSNELYNLPETIGCLVSLKDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +G  LS IP+E+     +T LD+S N ++ LP E+ +  SL
Sbjct: 205 DGNQLSDIPAEVGSMRSLTCLDVSENKLERLPEEMGNLLSL 245



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 29/48 (60%)

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           ++L L    +  +P +I    ++ +LD+SRN I ELP  +S C +LQV
Sbjct: 62  RKLGLSDNEIQRLPGDIANFNQLVELDISRNDIMELPESISYCKTLQV 109


>gi|440804214|gb|ELR25091.1| Leucinerich repeat protein lrrA, putative [Acanthamoeba castellanii
           str. Neff]
          Length = 507

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 211/431 (48%), Gaps = 47/431 (10%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNI---E 58
           D + K AR    L+L N  +  VP  +         GD    A  L++L L +N +    
Sbjct: 54  DELGKLARIE-VLDLGNNRINHVPPAL---------GDL---APTLRELWLCNNKLFFTA 100

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
            L  +L  L LL  L++S N+L ELPA +G+L  L+ LD+S N++   P E G+  AL+ 
Sbjct: 101 PLTPNLGKLRLLQKLDLSGNQLEELPAELGQLSALQYLDISGNNLQVFPPEFGNLRALLI 160

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           F   +N+L+ L   +G    LS++  +NN ++ LP  + +   +   D+  NKL     +
Sbjct: 161 FKAENNRLRALAPEVGNLTELSEWYLANNALSRLPPQIGNLRNLQVFDLSNNKL----QD 216

Query: 179 LIASWTMLTELIA-----SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
           L A    L  L +     + NL    P  +  L++L  + L    +  +P  +    S+ 
Sbjct: 217 LPAEMGYLARLRSFSVNENSNLKTLFP--LEQLNQLQYMGLRNTLLDELPEDLCTLPSIV 274

Query: 234 EFYMGNN-ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG-- 289
           E  + NN  +  +P E+G+L+ L  LDL  N+L     E   L  L +LDL  NSL+   
Sbjct: 275 ELDLRNNLQIGRIPPEIGRLTTLRRLDLFGNKLTNLPAEIGNLVNLELLDLRQNSLAIEL 334

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS------RLPENED----- 338
           +PPE+G++T L +LL++ N L TL + +    T   LK L +       +PE        
Sbjct: 335 IPPELGRLTRLERLLMSKNNLATLPAEI---KTMYALKELDAANNVLLSVPEEIGCLSNL 391

Query: 339 SEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
            + + +   L+T+   +++ +   +L ++G  +  +PSE+ E   + K+D+S N +  LP
Sbjct: 392 QKLNVSGNRLLTLPPTIALLTALTKLDIKGNEIHELPSEVGELSSVVKIDMSHNMMTNLP 451

Query: 397 PELSSCASLQV 407
            EL S   L+V
Sbjct: 452 WELGSLPKLEV 462



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 155/311 (49%), Gaps = 26/311 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +  LA+N + +L   + NL  L V ++S+NKL +LPA +G L  L+S  V+ NS +K
Sbjct: 180 ELSEWYLANNALSRLPPQIGNLRNLQVFDLSNNKLQDLPAEMGYLARLRSFSVNENSNLK 239

Query: 106 -----------------------IPDEIGSATALVKFDCSSN-QLKELPSSLGRCLNLSD 141
                                  +P+++ +  ++V+ D  +N Q+  +P  +GR   L  
Sbjct: 240 TLFPLEQLNQLQYMGLRNTLLDELPEDLCTLPSIVELDLRNNLQIGRIPPEIGRLTTLRR 299

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTV-LSNNLIASWTMLTELIASKNLLNGMP 200
                N +T+LP ++ +   +  LD+  N L + L    +   T L  L+ SKN L  +P
Sbjct: 300 LDLFGNKLTNLPAEIGNLVNLELLDLRQNSLAIELIPPELGRLTRLERLLMSKNNLATLP 359

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             I ++  L  LD   N +LS+P  I    +L +  +  N L  LP  +  L+ L  LD+
Sbjct: 360 AEIKTMYALKELDAANNVLLSVPEEIGCLSNLQKLNVSGNRLLTLPPTIALLTALTKLDI 419

Query: 261 HSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             N++ E   E  +L   V +D+S+N ++ LP E+G +  L  + ++ NPL      ++N
Sbjct: 420 KGNEIHELPSEVGELSSVVKIDMSHNMMTNLPWELGSLPKLEVMDISHNPLVIPPPDVLN 479

Query: 320 GPTPALLKYLR 330
             TPA+L +LR
Sbjct: 480 RGTPAVLAWLR 490



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 136/331 (41%), Gaps = 49/331 (14%)

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D     + E+P S+ R L   +   + N ITSLP++L   +++  LD+  N++  +   L
Sbjct: 21  DLRKQGIPEIPKSV-RQLQCRELILAENDITSLPDELGKLARIEVLDLGNNRINHVPPAL 79

Query: 180 --------------------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
                                     +    +L +L  S N L  +P  +G LS L  LD
Sbjct: 80  GDLAPTLRELWLCNNKLFFTAPLTPNLGKLRLLQKLDLSGNQLEELPAELGQLSALQYLD 139

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           +  N +   P       +L  F   NN L AL  E+G L++L    L +N L     +  
Sbjct: 140 ISGNNLQVFPPEFGNLRALLIFKAENNRLRALAPEVGNLTELSEWYLANNALSRLPPQIG 199

Query: 274 QLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN-------PLRTLRSSLVNGPTPAL 325
            LR L V DLSNN L  LP E+G +  LR   +  N       PL  L      G    L
Sbjct: 200 NLRNLQVFDLSNNKLQDLPAEMGYLARLRSFSVNENSNLKTLFPLEQLNQLQYMG----L 255

Query: 326 LKYLRSRLPENEDSEASTTKEDL--------ITMATRLSVTSKELSLEGMNLSAIPSEIW 377
              L   LPE+  +  S  + DL        I        T + L L G  L+ +P+EI 
Sbjct: 256 RNTLLDELPEDLCTLPSIVELDLRNNLQIGRIPPEIGRLTTLRRLDLFGNKLTNLPAEIG 315

Query: 378 EAGEITKLDLSRNS--IQELPPELSSCASLQ 406
               +  LDL +NS  I+ +PPEL     L+
Sbjct: 316 NLVNLELLDLRQNSLAIELIPPELGRLTRLE 346



 Score = 38.9 bits (89), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 33/162 (20%)

Query: 258 LDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           +DL    + E      QL+   L L+ N ++ LP E+GK+  +  L L  N         
Sbjct: 20  VDLRKQGIPEIPKSVRQLQCRELILAENDITSLPDELGKLARIEVLDLGNN--------R 71

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS------------KELSLE 365
           +N   PAL              + + T  +L     +L  T+            ++L L 
Sbjct: 72  INHVPPAL-------------GDLAPTLRELWLCNNKLFFTAPLTPNLGKLRLLQKLDLS 118

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           G  L  +P+E+ +   +  LD+S N++Q  PPE  +  +L +
Sbjct: 119 GNQLEELPAELGQLSALQYLDISGNNLQVFPPEFGNLRALLI 160


>gi|421132147|ref|ZP_15592319.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410356394|gb|EKP03731.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 354

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%)

Query: 6   KAARTSGS---LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           KA + S +   L+LS ++L   P E+  +KN               LQKL L+ N +  L
Sbjct: 35  KALQNSSNVRVLDLSFQNLTSFPKEIGQFKN---------------LQKLDLSGNELTVL 79

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +++  L  L  L++  NKL+ LP  I +L  LK+LD+  N +M +P E+     L K +
Sbjct: 80  SKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLN 139

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S N+L  +P  +G+  NL   K  +N I SLP+++    ++ +L +E N+   +    +
Sbjct: 140 LSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEAL 199

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                L +L  S+N L  +P+ I  L  L  L L +N+I  +P+ +    +L E Y+  N
Sbjct: 200 -QLKNLQKLNLSENQLISIPKEILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSEN 258

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
             ++LP E+ KL  L  L L +N+L     E  QL+ L  L+L NN L+ LP EIG++  
Sbjct: 259 QFTSLPKEIDKLKNLRWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLKN 318

Query: 300 LRKLLLTGNPL 310
           L++L L  NP 
Sbjct: 319 LQRLELDSNPF 329



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 144/315 (45%), Gaps = 38/315 (12%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+SF ++   P EIG    L K D S N+L  L   + +  NL +    +N +T+L
Sbjct: 43  VRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+L  +   ++   T L +L  S N LN +P+ IG L  L  L
Sbjct: 103 PKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQT-LEKLNLSLNRLNAVPKEIGQLKNLQIL 161

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  N+I+S+P  I G   L E  + NN    +P E  +L  L  L+L  NQL     E 
Sbjct: 162 KLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLISIPKEI 221

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  L L  N ++ LP E+ ++  L++L L+ N   +L   +        LK LR 
Sbjct: 222 LQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDK------LKNLRW 275

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                         LSL+   L+ +P EI +   + +L+L  N 
Sbjct: 276 ------------------------------LSLKNNRLTTLPKEIGQLKNLQRLELGNNQ 305

Query: 392 IQELPPELSSCASLQ 406
           +  LP E+    +LQ
Sbjct: 306 LTNLPKEIGQLKNLQ 320


>gi|359321003|ref|XP_003639483.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1 [Canis lupus familiaris]
          Length = 524

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 142/273 (52%), Gaps = 4/273 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +
Sbjct: 107 LQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYL 166

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +     L + D  +N++  LP S+G  L+L D     N ++ LP+++ +   +  LD
Sbjct: 167 PDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLD 226

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N+L  L    I+  T LT+L+ S+NLL  +P+ IG L +L  L + QNR+  +P ++
Sbjct: 227 VSENRLERLPEE-ISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAV 285

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSN 284
             C SL E  +  N L  LP  +GKL KL  L+   N+L     E   C   L+V  + +
Sbjct: 286 GDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGC-CSLTVFCVRD 344

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           N L+ LP E+ + T L  L + GN L  L  SL
Sbjct: 345 NRLTRLPAEVSQATELHVLDVAGNRLLHLPLSL 377



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 192/407 (47%), Gaps = 47/407 (11%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILAH 54
           +  R   +++  + SL  VP E+Y+      E            +++++ V L+KL L+ 
Sbjct: 9   RCNRHXETIDKRHCSLVYVPEEIYRYXRFLEELLLDANQLRELPEQFFQLVKLRKLGLSD 68

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N I++L  ++ N   L  L+VS N + E+P +I     L+  D S N + ++P+      
Sbjct: 69  NEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQ 128

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L     +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  
Sbjct: 129 NLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYN 188

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L  + I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +
Sbjct: 189 LPES-IGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTD 247

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI 294
             +  N L  +P  +GKL KL                      S+L +  N L+ LP  +
Sbjct: 248 LVISQNLLEMIPDGIGKLKKL----------------------SILKVDQNRLTQLPEAV 285

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
           G   +L +L+LT N L TL  S+        LK L S L  + +   S  KE  I     
Sbjct: 286 GDCESLTELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCS 336

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
           L+V      +    L+ +P+E+ +A E+  LD++ N +  LP  L++
Sbjct: 337 LTV----FCVRDNRLTRLPAEVSQATELHVLDVAGNRLLHLPLSLTA 379



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N +  +P+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPEA-VGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ LPAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRLPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 160/349 (45%), Gaps = 40/349 (11%)

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +E  R    L  L +  N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D
Sbjct: 29  EEIYRYXRFLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELD 88

Query: 121 CSSNQLKELPSSLGRC--LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            S N + E+P S+  C  L ++DF  S N +T LPE   +   ++ L V    L  L  N
Sbjct: 89  VSRNDIPEIPESISFCKALQIADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN 146

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I +   L  L   +NLL  +P+++  L RL  LDL  N I ++P SI     L + ++ 
Sbjct: 147 -IGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLD 205

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMT 298
            N LS LP E+G L  L             C          LD+S N L  LP EI  +T
Sbjct: 206 GNQLSELPQEIGNLKNL------------LC----------LDVSENRLERLPEEISGLT 243

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
           +L  L+++ N L  +   +      ++LK  ++RL   +  EA    E L          
Sbjct: 244 SLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRL--TQLPEAVGDCESLT--------- 292

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             EL L    L  +P  I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 293 --ELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 18/233 (7%)

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  
Sbjct: 37  FLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPE 96

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           +P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L
Sbjct: 97  IPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASL 156

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L  L  SL       L +     L  NE      +   L+ +        K+L 
Sbjct: 157 ELRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLW 203

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           L+G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 204 LDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|372273437|ref|NP_001243220.1| scribbled homolog [Xenopus (Silurana) tropicalis]
 gi|355895400|gb|AET07148.1| scribbled short isoform [Xenopus (Silurana) tropicalis]
          Length = 976

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 189/390 (48%), Gaps = 51/390 (13%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L++S N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQS 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LPS +G   NL   +   N + S+P  L+   K+ +LD+  N L VL + L  +   L E
Sbjct: 143 LPSDIGNLSNLVTLELRENVLKSVPMSLSFLVKLEQLDLGSNDLQVLPDTL-GALPNLRE 201

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L   +N L+ +P  +G+L RL+ LD+ +N++  +P+ ISG  SL +  +  N LS+LP+ 
Sbjct: 202 LWLDRNQLSSLPSELGNLRRLVCLDVSENKLEQLPAEISGLMSLTDLLLSQNQLSSLPSS 261

Query: 249 LGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           LG+L +L  L +  N+L +    +  C+  LS + L+ N L+ LP  +G +T L  L + 
Sbjct: 262 LGQLKQLSILKVDQNRLTQLTESIGDCE-NLSEIILTENLLTVLPKSMGNLTKLTNLNVD 320

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            N L +L S                                 I     L+V    LSL  
Sbjct: 321 RNRLLSLPSE--------------------------------IGGCASLNV----LSLRD 344

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
             LSA+P E+  A E+  LD++ N +  LP
Sbjct: 345 NQLSALPPELAGATELHVLDVAGNRLLNLP 374



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 127/241 (52%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N+++ L + L  LP L  L +  N+LS LP+ +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGSNDLQVLPDTLGALPNLRELWLDRNQLSSLPSELGNLRRLVCLDVSENKLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P EI    +L     S NQL  LPSSLG+   LS  K   N +T L E + DC  +S 
Sbjct: 234 QLPAEISGLMSLTDLLLSQNQLSSLPSSLGQLKQLSILKVDQNRLTQLTESIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  E+I ++NLL  +P+++G+L++L  L++ +NR+LS+PS
Sbjct: 293 -----------------------EIILTENLLTVLPKSMGNLTKLTNLNVDRNRLLSLPS 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC SL    + +N LSALP EL   ++L  LD+  N+L         L L  L L+ 
Sbjct: 330 EIGGCASLNVLSLRDNQLSALPPELAGATELHVLDVAGNRLLNLPFALTNLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 162/343 (47%), Gaps = 39/343 (11%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +  N ++                      
Sbjct: 106 SLEIADF--SGNPLSRLPDGFTQLRSLAHLAL--NDVS---------------------- 139

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG+LS L+ L+L +N + S+P S+S    L +  +G+N L  LP  LG L  L
Sbjct: 140 LQSLPSDIGNLSNLVTLELRENVLKSVPMSLSFLVKLEQLDLGSNDLQVLPDTLGALPNL 199

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L  NQL     E   LR L  LD+S N L  LP EI  + +L  LLL+ N L +L 
Sbjct: 200 RELWLDRNQLSSLPSELGNLRRLVCLDVSENKLEQLPAEISGLMSLTDLLLSQNQLSSLP 259

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITMATRLSVTSKE---------LSL 364
           SSL      ++LK  ++RL +  +S        ++I     L+V  K          L++
Sbjct: 260 SSLGQLKQLSILKVDQNRLTQLTESIGDCENLSEIILTENLLTVLPKSMGNLTKLTNLNV 319

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +   L ++PSEI     +  L L  N +  LPPEL+    L V
Sbjct: 320 DRNRLLSLPSEIGGCASLNVLSLRDNQLSALPPELAGATELHV 362



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 127/314 (40%), Gaps = 83/314 (26%)

Query: 93  LKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++S+D    S+  +P+EI   + +L +    +NQL+ELP    R LNL     S+N I  
Sbjct: 14  VESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQR 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP +                        +A++  L EL  S+N +  +PE+I     L  
Sbjct: 74  LPPE------------------------VANFMQLVELDISRNDIPEIPESIKFCKSLEI 109

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D   N +  +P   +   SLA   + + +L +LP+++G LS L TL+L           
Sbjct: 110 ADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQSLPSDIGNLSNLVTLELRE--------- 160

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                        N L  +P  +  +  L +L L  N L+ L  +L  G  P L      
Sbjct: 161 -------------NVLKSVPMSLSFLVKLEQLDLGSNDLQVLPDTL--GALPNL------ 199

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                       +EL L+   LS++PSE+     +  LD+S N 
Sbjct: 200 ----------------------------RELWLDRNQLSSLPSELGNLRRLVCLDVSENK 231

Query: 392 IQELPPELSSCASL 405
           +++LP E+S   SL
Sbjct: 232 LEQLPAEISGLMSL 245



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 89/214 (41%), Gaps = 40/214 (18%)

Query: 196 LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +PE I   SR L  L L  N++  +P       +L +  + +N +  LP E+    +
Sbjct: 24  LQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQ 83

Query: 255 LGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           L  LD+  N + E    ++ C+  L + D S N LS LP    ++ +L  L L    L++
Sbjct: 84  LVELDISRNDIPEIPESIKFCK-SLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQS 142

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L S + N                           +L+T+  R +V           L ++
Sbjct: 143 LPSDIGN-------------------------LSNLVTLELRENV-----------LKSV 166

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           P  +    ++ +LDL  N +Q LP  L +  +L+
Sbjct: 167 PMSLSFLVKLEQLDLGSNDLQVLPDTLGALPNLR 200


>gi|333983716|ref|YP_004512926.1| adenylate cyclase [Methylomonas methanica MC09]
 gi|333807757|gb|AEG00427.1| Adenylate cyclase [Methylomonas methanica MC09]
          Length = 504

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 189/415 (45%), Gaps = 78/415 (18%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF---- 100
           + L  L L HN + ++ + +  L  LT L++S+N+L++LP +IG L  L  L + F    
Sbjct: 70  LSLTHLDLRHNQLTEVPDYIGKLINLTCLDLSNNQLTKLPESIGNLTRLTDLYLQFNKLS 129

Query: 101 --------------------NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
                               N + K+PD IG+ + L     S NQL ELP S+ + +NL+
Sbjct: 130 DLPESIGRLTNLTNSLWLSNNQLKKLPDSIGNLSNLTGIILSGNQLTELPESISKLINLT 189

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL-IASKNL---- 195
           +   S+N +  LPE + + +K+  L + GN+LT L  + I +   L+EL +A  NL    
Sbjct: 190 NLSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKS-IGNLRKLSELSLAGNNLTEVP 248

Query: 196 --------------------------------LNGMPETIGSLSRLIRLDLHQNRILSIP 223
                                           L  +PE+IG+L  L    +   ++  +P
Sbjct: 249 ECIGNLINLTSLSLGSGSRGVLKTKSPESNDTLKKLPESIGNLKMLKSFSIGSTQLTKLP 308

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLD 281
            SI    +L E ++ NN L  LP  +G L+KL  L L  NQL +   C+     +L  + 
Sbjct: 309 ESIGNLTNLRELFLENNQLIELPESIGNLTKLDDLRLSYNQLIKLPDCIGNLT-KLKRII 367

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           L NN L  LP  IG MT L +L L+ N L  L  SL N      L+   +RL E  ++  
Sbjct: 368 LENNQLIDLPESIGNMTNLVELRLSDNQLIKLPESLGNLTKLEYLQLNHNRLVEIPEAIG 427

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           + TK       TRLS+   +       +  +P  I    ++T+L L +N I +LP
Sbjct: 428 NLTK------LTRLSIGDNQ-------IVELPESIGNLSKLTRLCLHKNQITKLP 469



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 176/353 (49%), Gaps = 30/353 (8%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT L++ HN+L+E+P  IG+L  L  LD+S N + K+P+ IG+ T L       N+L +L
Sbjct: 72  LTHLDLRHNQLTEVPDYIGKLINLTCLDLSNNQLTKLPESIGNLTRLTDLYLQFNKLSDL 131

Query: 130 PSSLGRCLNLSD-FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           P S+GR  NL++    SNN +  LP+ + + S ++ + + GN+LT L  + I+    LT 
Sbjct: 132 PESIGRLTNLTNSLWLSNNQLKKLPDSIGNLSNLTGIILSGNQLTELPES-ISKLINLTN 190

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S N LN +PE+IG+L++L  L L  N++  +P SI     L+E  +  N L+ +P  
Sbjct: 191 LSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGNLRKLSELSLAGNNLTEVPEC 250

Query: 249 LGKLSKLGTLDLHS--------------NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 293
           +G L  L +L L S              + LK+       L+ L    + +  L+ LP  
Sbjct: 251 IGNLINLTSLSLGSGSRGVLKTKSPESNDTLKKLPESIGNLKMLKSFSIGSTQLTKLPES 310

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           IG +T LR+L L  N L  L  S+ N     L K    RL  N+  +      D I   T
Sbjct: 311 IGNLTNLRELFLENNQLIELPESIGN-----LTKLDDLRLSYNQLIKLP----DCIGNLT 361

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +L    K + LE   L  +P  I     + +L LS N + +LP  L +   L+
Sbjct: 362 KL----KRIILENNQLIDLPESIGNMTNLVELRLSDNQLIKLPESLGNLTKLE 410



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 147/285 (51%), Gaps = 37/285 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNV--------------SHNKLSELPAAIGELHM 92
           L +L LA NN+ ++ E + NL  LT L++              S++ L +LP +IG L M
Sbjct: 234 LSELSLAGNNLTEVPECIGNLINLTSLSLGSGSRGVLKTKSPESNDTLKKLPESIGNLKM 293

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           LKS  +    + K+P+ IG+ T L +    +NQL ELP S+G    L D + S N +  L
Sbjct: 294 LKSFSIGSTQLTKLPESIGNLTNLRELFLENNQLIELPESIGNLTKLDDLRLSYNQLIKL 353

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+ + + +K+ ++ +E N+L  L  + I + T L EL  S N L  +PE++G+L++L  L
Sbjct: 354 PDCIGNLTKLKRIILENNQLIDLPES-IGNMTNLVELRLSDNQLIKLPESLGNLTKLEYL 412

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L+ NR++ IP +I     L    +G+N +  LP  +G LSKL  L LH NQ+       
Sbjct: 413 QLNHNRLVEIPEAIGNLTKLTRLSIGDNQIVELPESIGNLSKLTRLCLHKNQI------- 465

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                          + LP   GK+  L+ L L  NP++ L + L
Sbjct: 466 ---------------TKLPESFGKLKKLKDLYLNSNPIKYLPAEL 495



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 119/209 (56%), Gaps = 1/209 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+   +    + KL E + NL  L  L + +N+L ELP +IG L  L  L +S+N ++K+
Sbjct: 294 LKSFSIGSTQLTKLPESIGNLTNLRELFLENNQLIELPESIGNLTKLDDLRLSYNQLIKL 353

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IG+ T L +    +NQL +LP S+G   NL + + S+N +  LPE L + +K+  L 
Sbjct: 354 PDCIGNLTKLKRIILENNQLIDLPESIGNMTNLVELRLSDNQLIKLPESLGNLTKLEYLQ 413

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L  +    I + T LT L    N +  +PE+IG+LS+L RL LH+N+I  +P S 
Sbjct: 414 LNHNRLVEIP-EAIGNLTKLTRLSIGDNQIVELPESIGNLSKLTRLCLHKNQITKLPESF 472

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKL 255
                L + Y+ +N +  LPAEL  L K+
Sbjct: 473 GKLKKLKDLYLNSNPIKYLPAELSHLIKI 501


>gi|395534350|ref|XP_003769205.1| PREDICTED: leucine-rich repeat-containing protein 1 [Sarcophilus
           harrisii]
          Length = 524

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 181/388 (46%), Gaps = 47/388 (12%)

Query: 20  SLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL  VP E+Y+      E            +++++ V L+KL L+ N I++L  ++ N  
Sbjct: 23  SLVYVPEEIYRYTRSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++P+       L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESISFCKALQRADFSGNPLTRLPESFPELQNLTCLSVNDISLQS 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP ++G   NL+  +   N +T LPE L    ++ +LD+  N++  L    I +   L +
Sbjct: 143 LPENIGNLYNLASLELRENLLTYLPESLTQLQRLKELDLGNNEIYHLPET-IGALLHLED 201

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L    N L  +P+ IG+L  L+ LD+ +N++  +P  ISG  SL +  + +N L  LP  
Sbjct: 202 LWLDGNQLAELPQEIGNLKNLLCLDVSENKLERLPEEISGLASLTDLVISHNLLDVLPDG 261

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           +GKL KL                      S+L    N L  L   IG+  +L +L+LT N
Sbjct: 262 IGKLKKL----------------------SILKTDQNRLVQLTEAIGECESLTELVLTEN 299

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L TL  S+        LK L S L  + +   S  KE  I     L+V     S+    
Sbjct: 300 QLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV----FSVRDNR 346

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELP 396
           L+ IPSE+ +A E+  LD++ N +  LP
Sbjct: 347 LTRIPSEVSQASELHVLDVAGNRLLHLP 374



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 134/241 (55%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L++ +N++  LP  IG L  L+ L +  N + +
Sbjct: 152 NLASLELRENLLTYLPESLTQLQRLKELDLGNNEIYHLPETIGALLHLEDLWLDGNQLAE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S+N +  LP+ +    K+S L
Sbjct: 212 LPQEIGNLKNLLCLDVSENKLERLPEEISGLASLTDLVISHNLLDVLPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
             + N+L  L+   I     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KTDQNRLVQLTEA-IGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +P+E+ + S+L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFSVRDNRLTRIPSEVSQASELHVLDVAGNRLLHLPLSLTNLKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 148/330 (44%), Gaps = 36/330 (10%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 105

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
            L     S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NLL 
Sbjct: 106 ALQRADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENLLT 164

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +PE++  L RL  LDL  N I  +P +I     L + ++  N L+ LP E+G L  L  
Sbjct: 165 YLPESLTQLQRLKELDLGNNEIYHLPETIGALLHLEDLWLDGNQLAELPQEIGNLKNL-- 222

Query: 258 LDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                      C          LD+S N L  LP EI  + +L  L+++ N L  L   +
Sbjct: 223 ----------LC----------LDVSENKLERLPEEISGLASLTDLVISHNLLDVLPDGI 262

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                 ++LK  ++RL +             +T A     +  EL L    L  +P  I 
Sbjct: 263 GKLKKLSILKTDQNRLVQ-------------LTEAIGECESLTELVLTENQLLTLPKSIG 309

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +  +++ L+  RN +  LP E+  C SL V
Sbjct: 310 KLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 100/230 (43%), Gaps = 20/230 (8%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQRADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELS 363
           L  N L  L  SL        L+ L+   L  NE      T   L+ +        ++L 
Sbjct: 158 LRENLLTYLPESLTQ------LQRLKELDLGNNEIYHLPETIGALLHL--------EDLW 203

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLV 413
           L+G  L+ +P EI     +  LD+S N ++ LP E+S  ASL    +DLV
Sbjct: 204 LDGNQLAELPQEIGNLKNLLCLDVSENKLERLPEEISGLASL----TDLV 249


>gi|25396047|pir||A88684 protein AC7.2 [imported] - Caenorhabditis elegans
          Length = 613

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 190/382 (49%), Gaps = 33/382 (8%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++   L+ L L +N I  + E + NL  L +L+V  NK+ ELP+AIG+L  L    VS+N
Sbjct: 208 YKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYN 267

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            + ++P+EIG   +L + D   N L ELP S+G+ +NL       N I  +P +L  C +
Sbjct: 268 HLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQ 327

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL---IRLDLHQNR 218
           + +  VE N L +L  NL+     +  +  S+N L   P   G   +    + +++  N+
Sbjct: 328 LEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPA--GGPQQFVSTVTINMEHNQ 385

Query: 219 ILSIPSSI-SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-R 276
           I  IP  I S    L +  +  N L +LP ++G  + +  L+L +NQLK    +  +L  
Sbjct: 386 ISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVN 445

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L +L LSNN L  LP +IG +  LR+L L  N L T+ + +        L++L       
Sbjct: 446 LEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEI------GFLQHL------- 492

Query: 337 EDSEASTTKEDLITMATRLS--VTSKELSLEGMNLSAIPSEIWEA--------GEITKLD 386
             ++       ++T+   +    + ++L L   NL+AIP EI E           +  L 
Sbjct: 493 --TKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGEFLVHISSHLDSLKSLY 550

Query: 387 LSRN-SIQELPPELSSCASLQV 407
           L+ N S+  LP EL+ C SL++
Sbjct: 551 LNDNSSLHNLPFELALCQSLEI 572



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 145/293 (49%), Gaps = 19/293 (6%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF--NS 102
            L++ I+  N+++ L  +L   LP +  +N+S N+L+  PA  G    + ++ ++   N 
Sbjct: 327 QLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAG-GPQQFVSTVTINMEHNQ 385

Query: 103 IMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           I KIP  I S AT L K +   N+L  LP  +G   ++++   S N +  LPED+     
Sbjct: 386 ISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVN 445

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L +  N+L  L N  I +   L EL   +N L  +P  IG L  L +L +  N+IL+
Sbjct: 446 LEILVLSNNQLKKLPNQ-IGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILT 504

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 281
           +P SI   CSL +  +G N L+A+P E+G+   L  +  H + LK   +           
Sbjct: 505 LPRSIGNLCSLQDLRLGENNLTAIPEEIGEF--LVHISSHLDSLKSLYLN---------- 552

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             N+SL  LP E+    +L  + +  +PL  +   +  G    +++YL+ + P
Sbjct: 553 -DNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 604



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 108/255 (42%), Gaps = 62/255 (24%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           + +A  L KL L  N +  L  D+ +   +T LN+S N+L  LP  I +L  L+ L +S 
Sbjct: 394 FSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSN 453

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + K+P++IG+   L + D   N+L+ +P+ +G   +L+     +N I +LP  + +  
Sbjct: 454 NQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLC 513

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            +  L +  N LT                         +PE IG    L+ +  H +   
Sbjct: 514 SLQDLRLGENNLT------------------------AIPEEIGEF--LVHISSHLD--- 544

Query: 221 SIPSSISGCCSLAEFYMGNN-ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV 279
                     SL   Y+ +N +L  LP EL                       CQ  L +
Sbjct: 545 ----------SLKSLYLNDNSSLHNLPFELA---------------------LCQ-SLEI 572

Query: 280 LDLSNNSLSGLPPEI 294
           + + N+ LS +PPEI
Sbjct: 573 MSIENSPLSQIPPEI 587


>gi|421109036|ref|ZP_15569563.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410005803|gb|EKO59587.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 353

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 146/266 (54%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N +  L +++  L  L  L++  NKL+ LP  I +L  LK+LD+  N +  
Sbjct: 65  NLQRLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLTT 124

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+     L K + S N+L  +P  +G+  NL   K  +N I SLP+++ +  ++ +L
Sbjct: 125 VPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIVSLPKEIEELQELKEL 184

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +E N+   +    +     L +L  S+N L  +P+ I  L  L  L L +N+I  +P+ 
Sbjct: 185 ILENNRFKNVPGEAL-QLKNLQKLNLSENQLVSIPKEILQLQNLRNLVLDRNQITILPTE 243

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +    +L E Y+  N  ++LP E+ KL  L  L L++N+L     E  QL+ L  L+L N
Sbjct: 244 VLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLNNNRLTTLPKEIGQLKNLQRLELGN 303

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP EIG++  L++L L  NPL
Sbjct: 304 NQLTNLPKEIGQLKNLQRLELDSNPL 329



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 143/315 (45%), Gaps = 38/315 (12%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+SF ++   P EIG    L + D S N+L  L   + +  NL +    +N +T+L
Sbjct: 43  VRVLDLSFQNLTTFPKEIGQFKNLQRLDLSGNELTVLSKEIVQLQNLQELSLHSNKLTNL 102

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+LT +   ++   T L +L  S N LN +P+ IG L  L  L
Sbjct: 103 PKEIEQLKSLKNLDLFRNQLTTVPKEVMLLQT-LEKLNLSLNRLNAVPKEIGQLKNLQIL 161

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  N+I+S+P  I     L E  + NN    +P E  +L  L  L+L  NQL     E 
Sbjct: 162 KLDHNQIVSLPKEIEELQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEI 221

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  L L  N ++ LP E+ ++  L++L L+ N   +L   +        LK LR 
Sbjct: 222 LQLQNLRNLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDK------LKNLRW 275

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                         LSL    L+ +P EI +   + +L+L  N 
Sbjct: 276 ------------------------------LSLNNNRLTTLPKEIGQLKNLQRLELGNNQ 305

Query: 392 IQELPPELSSCASLQ 406
           +  LP E+    +LQ
Sbjct: 306 LTNLPKEIGQLKNLQ 320



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 13/158 (8%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           L N   ++VP E               +  +LQKL L+ N +  + +++  L  L  L +
Sbjct: 186 LENNRFKNVPGEA-------------LQLKNLQKLNLSENQLVSIPKEILQLQNLRNLVL 232

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
             N+++ LP  + +L  L+ L +S N    +P EI     L     ++N+L  LP  +G+
Sbjct: 233 DRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLNNNRLTTLPKEIGQ 292

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             NL   +  NN +T+LP+++     + +L+++ N L+
Sbjct: 293 LKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPLS 330



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 22/162 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNLS   L  +P E+              +  +L+ L+L  N I  L  ++  L  L  
Sbjct: 206 KLNLSENQLVSIPKEI-------------LQLQNLRNLVLDRNQITILPTEVLQLQNLQE 252

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S N+ + LP  I +L  L+ L ++ N +  +P EIG    L + +  +NQL  LP  
Sbjct: 253 LYLSENQFTSLPKEIDKLKNLRWLSLNNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKE 312

Query: 133 LGRCLNLSDFKASNNCITSLPED-----LADCSKMSKLDVEG 169
           +G+  NL   +  +N ++S  ++     L +C    ++D EG
Sbjct: 313 IGQLKNLQRLELDSNPLSSKEKEKVVKLLPNC----EIDFEG 350


>gi|395860102|ref|XP_003802354.1| PREDICTED: protein scribble homolog isoform 3 [Otolemur garnettii]
          Length = 1669

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 169/358 (47%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +P +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVPEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 323 HLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTH 379



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  +PE + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E  EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVPEAIGDCENL-----------SELILTENLLTALPH 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339


>gi|393905431|gb|EJD73969.1| leucine-rich repeat protein SHOC-2 [Loa loa]
          Length = 498

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 193/430 (44%), Gaps = 97/430 (22%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+KL L+ N +  L + L  L  L  L++ HNKL ELP  I ++  L++L + +N I+
Sbjct: 61  VNLKKLGLSENGLTSLPDTLAALTRLETLDLRHNKLCELPPVIYQISSLETLWLRYNRIV 120

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            I  EIG    L   D   N+++ELP ++G+  +L     S N + ++PE++  CS++++
Sbjct: 121 SIGSEIGRLKRLKMIDLRENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIGQCSELTQ 180

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD++ N L                          +PE +G+L  LIRL +  N++  +PS
Sbjct: 181 LDLQHNDLV------------------------SLPEAMGNLQNLIRLGIRYNKLRHLPS 216

Query: 225 SISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEY----------CVE-- 271
            ++ C  L EF + +N L ALP   L  L  L T++L  N+L  +          CV   
Sbjct: 217 GMAFCHKLEEFIVESNQLEALPEGMLASLPNLKTINLSRNELTVFPSGGPQQFASCVSIN 276

Query: 272 -------------------------------------ACQLRLSVLDLSNNSLSGLPPEI 294
                                                 C L ++ L+LS N L  LP ++
Sbjct: 277 MEHNAIAKIPFGIFSKATGLTKLNLKENALTSMPLDMGCWLAMTELNLSTNQLRVLPDDV 336

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
            K+  L  L+L+ N L+ L S +        LK LR    E  + +A   +   +T  T+
Sbjct: 337 DKLVNLEVLVLSNNMLKKLPSQI------GSLKKLRELDLEENELDAIPNEIGFVTSLTK 390

Query: 355 LSVTSKELS---------------LEGMN-LSAIPSEIWEAGEITKLDLSRN-SIQELPP 397
           L + S +L                  G N L+++P EI     +  L ++ N S+  LP 
Sbjct: 391 LWIQSNKLVGLPRTIGNLTNLTDLRAGENCLTSLPEEIGNLDSLRSLYINDNPSLHNLPF 450

Query: 398 ELSSCASLQV 407
           EL+ CASL++
Sbjct: 451 ELALCASLEI 460



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 153/347 (44%), Gaps = 42/347 (12%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           LS   LR +P E+              +  +L +L L HN++  L E + NL  L  L +
Sbjct: 160 LSYNHLRTIPEEI-------------GQCSELTQLDLQHNDLVSLPEAMGNLQNLIRLGI 206

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE-IGSATALVKFDCSSNQLKELPSS-- 132
            +NKL  LP+ +   H L+   V  N +  +P+  + S   L   + S N+L   PS   
Sbjct: 207 RYNKLRHLPSGMAFCHKLEEFIVESNQLEALPEGMLASLPNLKTINLSRNELTVFPSGGP 266

Query: 133 -----------------------LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                                    +   L+      N +TS+P D+     M++L++  
Sbjct: 267 QQFASCVSINMEHNAIAKIPFGIFSKATGLTKLNLKENALTSMPLDMGCWLAMTELNLST 326

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+L VL ++ +     L  L+ S N+L  +P  IGSL +L  LDL +N + +IP+ I   
Sbjct: 327 NQLRVLPDD-VDKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELDAIPNEIGFV 385

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN-SL 287
            SL + ++ +N L  LP  +G L+ L  L    N L     E   L  L  L +++N SL
Sbjct: 386 TSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENCLTSLPEEIGNLDSLRSLYINDNPSL 445

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             LP E+    +L  + +   PL  +   +  G    +++YL+ + P
Sbjct: 446 HNLPFELALCASLEIMSIENCPLSQIPPEITAGGPSLVIQYLKMQGP 492



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 169/410 (41%), Gaps = 91/410 (22%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++S + +  +P++I +L  L  L +  N +  +P+EIG+   L K   S N L  LP
Sbjct: 18  TRLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLAVLPNEIGNLVNLKKLGLSENGLTSLP 77

Query: 131 SSLGRCLNLSDFKASNNCITSLP-----------------------EDLADCSKMSKLDV 167
            +L     L      +N +  LP                        ++    ++  +D+
Sbjct: 78  DTLAALTRLETLDLRHNKLCELPPVIYQISSLETLWLRYNRIVSIGSEIGRLKRLKMIDL 137

Query: 168 EGNKLTVLS----------------NNL------IASWTMLTELIASKNLLNGMPETIGS 205
             NK+  L                 N+L      I   + LT+L    N L  +PE +G+
Sbjct: 138 RENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIGQCSELTQLDLQHNDLVSLPEAMGN 197

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQ 264
           L  LIRL +  N++  +PS ++ C  L EF + +N L ALP   L  L  L T++L  N+
Sbjct: 198 LQNLIRLGIRYNKLRHLPSGMAFCHKLEEFIVESNQLEALPEGMLASLPNLKTINLSRNE 257

Query: 265 LKEY----------CVE----------------ACQLRLSVLDLSNNSLSGLPPEIGKMT 298
           L  +          CV                 +    L+ L+L  N+L+ +P ++G   
Sbjct: 258 LTVFPSGGPQQFASCVSINMEHNAIAKIPFGIFSKATGLTKLNLKENALTSMPLDMGCWL 317

Query: 299 TLRKLLLTGNPLRTLR---SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
            + +L L+ N LR L      LVN     L   +  +LP    S+  + K+         
Sbjct: 318 AMTELNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLP----SQIGSLKK--------- 364

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
               +EL LE   L AIP+EI     +TKL +  N +  LP  + +  +L
Sbjct: 365 ---LRELDLEENELDAIPNEIGFVTSLTKLWIQSNKLVGLPRTIGNLTNL 411



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 13/133 (9%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           ++L+ L L  N L+ LP EIG +  L+KL L+ N L +L  +L      AL +     L 
Sbjct: 38  VQLTELFLYKNKLAVLPNEIGNLVNLKKLGLSENGLTSLPDTLA-----ALTRLETLDLR 92

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
            N+  E       + ++ T        L L    + +I SEI     +  +DL  N I+E
Sbjct: 93  HNKLCELPPVIYQISSLET--------LWLRYNRIVSIGSEIGRLKRLKMIDLRENKIRE 144

Query: 395 LPPELSSCASLQV 407
           LPP +    SL V
Sbjct: 145 LPPTIGQIKSLIV 157


>gi|418707326|ref|ZP_13268152.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772373|gb|EKR47561.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456971331|gb|EMG11964.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 354

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 133/261 (50%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQ 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EIGK+  L  L L  N L TL
Sbjct: 294 EIGKLKNLLWLSLVYNQLTTL 314



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 140/287 (48%), Gaps = 12/287 (4%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L N  IA  
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNE-IAKL 229

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L  L  S N L  +P+ I  L  L  LDL  N++ ++P  I    +L   ++ NN L+
Sbjct: 230 KKLQYLYLSDNQLITLPKEIEQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLT 289

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
            LP E+GKL  L  L L  NQL     E  QL+ L  L L+NN  S 
Sbjct: 290 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 336



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 130/314 (41%), Gaps = 61/314 (19%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S   +  +P EIG    L +     NQL  LP  + +  NL      +N +T+L
Sbjct: 48  VRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+LTVL                        P+ I  L  L  L
Sbjct: 108 PKEIEQLKNLQVLDLGSNQLTVL------------------------PQEIEQLKNLQLL 143

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            LH NR+ ++   I    +L    + NN L+ LP E+ +L  L +L L  NQ   +  E 
Sbjct: 144 YLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 203

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L VL L+NN ++ LP EI K+  L+ L L+ N L TL   +              
Sbjct: 204 GQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI-------------- 249

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                         E L  + T        L L    L  +P EI +   +  L LS N 
Sbjct: 250 --------------EQLENLQT--------LDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 287

Query: 392 IQELPPELSSCASL 405
           +  LP E+    +L
Sbjct: 288 LTILPQEIGKLKNL 301



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 117/292 (40%), Gaps = 61/292 (20%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S  +LK LP  +G+  NL       N +T LP+++     +  L +  N+LT     
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTT---- 106

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                               +P+ I  L  L  LDL  N++  +P  I    +L   Y+ 
Sbjct: 107 --------------------LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLH 146

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
           +N L+ L  ++ +L  L +LDL +NQL     E  QL+ L  L LS N  +  P EIG++
Sbjct: 147 SNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQL 206

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L L  N +  L + +      A LK L+                           
Sbjct: 207 QNLKVLFLNNNQITILPNEI------AKLKKLQY-------------------------- 234

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
               L L    L  +P EI +   +  LDL  N ++ LP E+    +LQ  F
Sbjct: 235 ----LYLSDNQLITLPKEIEQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLF 282



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 60/232 (25%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+LSN  L  +PNE+                                 E L+N   L  
Sbjct: 165 SLDLSNNQLTTLPNEI---------------------------------EQLKN---LKS 188

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S N+ +  P  IG+L  LK L ++ N I  +P+EI     L     S NQL  LP  
Sbjct: 189 LYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKE 248

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +  NL      NN + +LP+++     +  L +  N+LT+L                 
Sbjct: 249 IEQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTIL----------------- 291

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
                  P+ IG L  L+ L L  N++ ++P+ I    +L   Y+ NN  S+
Sbjct: 292 -------PQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 336



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 35/169 (20%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR-- 332
           L + VLDLS   L  LP EIGK+  L++L L  N L  L   +       LL YLRS   
Sbjct: 46  LEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSNRL 104

Query: 333 --LPEN---------------------EDSEASTTKEDLITMATRLSVTSKE-------- 361
             LP+                      ++ E     + L   + RL+  SK+        
Sbjct: 105 TTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLK 164

Query: 362 -LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            L L    L+ +P+EI +   +  L LS N     P E+    +L+V F
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLF 213


>gi|405968548|gb|EKC33612.1| hypothetical protein CGI_10017764 [Crassostrea gigas]
          Length = 799

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 174/354 (49%), Gaps = 15/354 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           ++QK+ LA N +  + E++  L  LT L++SHN + E+PA IG +  L  L++S N I  
Sbjct: 202 NIQKINLARNGVTLIPENIDKLSRLTWLDLSHNAVQEIPAQIGGVRFLHYLNLSHNHIKT 261

Query: 106 IPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           +P+EI +   AL   D S N++  LP  +     L+ F  SNN +  LPE + +   ++ 
Sbjct: 262 LPEEICNLGYALDHLDISHNEIPVLPDGMKSLRKLTYFDVSNNEVEYLPESIRELPCLTT 321

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V  NKL  +S         L  L  S+N +  +PE I  +  L+ LDL  N+I  +PS
Sbjct: 322 LGVSQNKL--MSMKFAVYLKQLEHLYLSRNSIEVIPEEIDHMKSLVTLDLSWNKIKELPS 379

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
           SI    SL    +  N LSA+P  LG    L  LDL  N+L     +  +LR L    +S
Sbjct: 380 SIGNVKSLKSLNVCGNKLSAIPDSLGHGQVLTFLDLSHNRLTVLPSDLRKLRNLETFHVS 439

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS-EAS 342
           +N ++ +P  I  +  LR L ++ N L  L         P  L +L   + +N  S   +
Sbjct: 440 HNEIALMPKSIDFLYQLRSLDVSKNGLNELN-------LPKTLTHL--NMSDNPLSINPT 490

Query: 343 TTKEDLITMATRLSVTS-KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
             +  ++ M  +  + +   L+L  + +  IP  ++    +  LDLS N+++ L
Sbjct: 491 DIRSTIVVMGDKDHLRNLTSLALCNLGMDEIPPSVFNLRCLKHLDLSNNALKTL 544



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 193/406 (47%), Gaps = 28/406 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L   N + + +P E+Y N + +    K+            +N +++L + +  L  L  +
Sbjct: 44  LKFGNGNWKSLPVEIYDNEEISQLAIKF---------TAENNRLKRLPKSIAALENLEHI 94

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++++N LS  P ++  +  L+ L +  N+I K+P  I   T L K   S+N+++ LP S+
Sbjct: 95  DITNNTLSAFPGSVSRMKKLEVLIIKNNAIKKLPPAIHKCTGLQKLYASNNKIRALPKSI 154

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  ++S    S+N I S+ + L + +  +++D+  N++T +    +     + ++  ++
Sbjct: 155 GKA-SISYMDVSSNMIRSIKKGLYEMT--AEVDLSDNRITEMPTAAVKKPN-IQKINLAR 210

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +PE I  LSRL  LDL  N +  IP+ I G   L    + +N +  LP E+  L 
Sbjct: 211 NGVTLIPENIDKLSRLTWLDLSHNAVQEIPAQIGGVRFLHYLNLSHNHIKTLPEEICNLG 270

Query: 254 -KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  LD+  N++         LR L+  D+SNN +  LP  I ++  L  L ++ N L 
Sbjct: 271 YALDHLDISHNEIPVLPDGMKSLRKLTYFDVSNNEVEYLPESIRELPCLTTLGVSQNKLM 330

Query: 312 TLRSSLVNGPTPALLKYLRSR----LPENEDSEASTTKEDLITMATRLSVTS-------K 360
           +++ ++       L  YL       +PE  D   S    DL     +   +S       K
Sbjct: 331 SMKFAVYLKQLEHL--YLSRNSIEVIPEEIDHMKSLVTLDLSWNKIKELPSSIGNVKSLK 388

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            L++ G  LSAIP  +     +T LDLS N +  LP +L    +L+
Sbjct: 389 SLNVCGNKLSAIPDSLGHGQVLTFLDLSHNRLTVLPSDLRKLRNLE 434



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 178/387 (45%), Gaps = 37/387 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L+ N+IE + E++ ++  L  L++S NK+ ELP++IG +  LKSL+V  N +  I
Sbjct: 341 LEHLYLSRNSIEVIPEEIDHMKSLVTLDLSWNKIKELPSSIGNVKSLKSLNVCGNKLSAI 400

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +G    L   D S N+L  LPS L +  NL  F  S+N I  +P+ +    ++  LD
Sbjct: 401 PDSLGHGQVLTFLDLSHNRLTVLPSDLRKLRNLETFHVSHNEIALMPKSIDFLYQLRSLD 460

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS----------LSRLIRLDLHQ 216
           V  N L  L  NL  +   LT L  S N L+  P  I S          L  L  L L  
Sbjct: 461 VSKNGLNEL--NLPKT---LTHLNMSDNPLSINPTDIRSTIVVMGDKDHLRNLTSLALCN 515

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 275
             +  IP S+     L    + NNAL  L   + K+  L ++    N++     +   L 
Sbjct: 516 LGMDEIPPSVFNLRCLKHLDLSNNALKTLTDNVCKMRGLVSITACHNEITALPEKISALK 575

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           +L  L +SNN L+   P +G++ +L  L ++ N +  L  +  +     L K +   L E
Sbjct: 576 KLEKLHVSNNGLTSFSPSLGRLVSLCDLNMSNNKITLLPDNFGD-----LNKLINMDLSE 630

Query: 336 NEDSEASTTKEDLITMATRLSVTS----------------KELSLEGMNLSAIPSEIWEA 379
           NE       + D++     L+++                 K L     +L +IPS++ + 
Sbjct: 631 NELLNFPKDQIDVLASLLHLNISKNHIDQMPIEFPYLYRLKVLRAASNDLKSIPSDMDKM 690

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQ 406
             +  LD+S N I+ LP ++     L+
Sbjct: 691 KSLEVLDISDNIIESLPEKICKMPELK 717



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 152/350 (43%), Gaps = 68/350 (19%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLN+    L  +P       D  G G        L  L L+HN +  L  DLR L  L  
Sbjct: 389 SLNVCGNKLSAIP-------DSLGHGQV------LTFLDLSHNRLTVLPSDLRKLRNLET 435

Query: 73  LNVSHNKLSELPAAIGELHMLKS-------------------LDVSFNSIM--------- 104
            +VSHN+++ +P +I  L+ L+S                   L++S N +          
Sbjct: 436 FHVSHNEIALMPKSIDFLYQLRSLDVSKNGLNELNLPKTLTHLNMSDNPLSINPTDIRST 495

Query: 105 ------------------------KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
                                   +IP  + +   L   D S+N LK L  ++ +   L 
Sbjct: 496 IVVMGDKDHLRNLTSLALCNLGMDEIPPSVFNLRCLKHLDLSNNALKTLTDNVCKMRGLV 555

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
              A +N IT+LPE ++   K+ KL V  N LT  S +L      L +L  S N +  +P
Sbjct: 556 SITACHNEITALPEKISALKKLEKLHVSNNGLTSFSPSL-GRLVSLCDLNMSNNKITLLP 614

Query: 201 ETIGSLSRLIRLDLHQNRILSIPS-SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           +  G L++LI +DL +N +L+ P   I    SL    +  N +  +P E   L +L  L 
Sbjct: 615 DNFGDLNKLINMDLSENELLNFPKDQIDVLASLLHLNISKNHIDQMPIEFPYLYRLKVLR 674

Query: 260 LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
             SN LK    +  +++ L VLD+S+N +  LP +I KM  L+++ ++ N
Sbjct: 675 AASNDLKSIPSDMDKMKSLEVLDISDNIIESLPEKICKMPELKEINVSEN 724



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 126/261 (48%), Gaps = 3/261 (1%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           L   +T   LN+S+  L   P ++       G+ D      +L  L L +  ++++   +
Sbjct: 469 LNLPKTLTHLNMSDNPLSINPTDIRSTIVVMGDKDHLR---NLTSLALCNLGMDEIPPSV 525

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
            NL  L  L++S+N L  L   + ++  L S+    N I  +P++I +   L K   S+N
Sbjct: 526 FNLRCLKHLDLSNNALKTLTDNVCKMRGLVSITACHNEITALPEKISALKKLEKLHVSNN 585

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
            L     SLGR ++L D   SNN IT LP++  D +K+  +D+  N+L     + I    
Sbjct: 586 GLTSFSPSLGRLVSLCDLNMSNNKITLLPDNFGDLNKLINMDLSENELLNFPKDQIDVLA 645

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L  SKN ++ MP     L RL  L    N + SIPS +    SL    + +N + +
Sbjct: 646 SLLHLNISKNHIDQMPIEFPYLYRLKVLRAASNDLKSIPSDMDKMKSLEVLDISDNIIES 705

Query: 245 LPAELGKLSKLGTLDLHSNQL 265
           LP ++ K+ +L  +++  N++
Sbjct: 706 LPEKICKMPELKEINVSENKI 726



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 3/169 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL +++N +      L  L  L  LN+S+NK++ LP   G+L+ L ++D+S N ++  
Sbjct: 577 LEKLHVSNNGLTSFSPSLGRLVSLCDLNMSNNKITLLPDNFGDLNKLINMDLSENELLNF 636

Query: 107 P-DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P D+I    +L+  + S N + ++P        L   +A++N + S+P D+     +  L
Sbjct: 637 PKDQIDVLASLLHLNISKNHIDQMPIEFPYLYRLKVLRAASNDLKSIPSDMDKMKSLEVL 696

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKN-LLNGMPETIGSLSRLIRLD 213
           D+  N +  L    I     L E+  S+N +  G P+   +L + I+++
Sbjct: 697 DISDNIIESLPEK-ICKMPELKEINVSENKITRGWPKAWENLRQKIKVE 744



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 4/109 (3%)

Query: 46  DLQKLI---LAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           DL KLI   L+ N +    K+ +  L  L  LN+S N + ++P     L+ LK L  + N
Sbjct: 619 DLNKLINMDLSENELLNFPKDQIDVLASLLHLNISKNHIDQMPIEFPYLYRLKVLRAASN 678

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCIT 150
            +  IP ++    +L   D S N ++ LP  + +   L +   S N IT
Sbjct: 679 DLKSIPSDMDKMKSLEVLDISDNIIESLPEKICKMPELKEINVSENKIT 727


>gi|348578841|ref|XP_003475190.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat protein
           SHOC-2-like [Cavia porcellus]
          Length = 584

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 202/402 (50%), Gaps = 36/402 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L +  LR++P+ VY+  D             L  L L  N I  +++D++NL  L++L
Sbjct: 174 LDLRHNKLREIPSVVYR-LD------------SLTTLYLRFNRITTVEKDIKNLSKLSML 220

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  NK+ +LPA IG+L  L +LDV+ N +  +P EIG+ T +   D   N+L +LP ++
Sbjct: 221 SIRENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTI 280

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G   +LS      N ++++P  LA CS + +L++E N ++ L  +L++S   L  L  ++
Sbjct: 281 GNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLAR 340

Query: 194 NLLNGMPETIG---SLSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPAEL 249
           N     P  +G     S +  L++  NRI  IP  I S    L++  M +N L++LP + 
Sbjct: 341 NCFQLYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDF 398

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G  + +  L+L +NQL +   +   L  L VL LSNN L  LP  +G +  LR+L L  N
Sbjct: 399 GTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEEN 458

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEG 366
                         P  + YL+    + + ++   T   L T+   +   +    L L  
Sbjct: 459 XFDH---------CPNEIAYLK----DLQXNKLVLTNNQLTTLPRGIGHLTNLTHLGLGE 505

Query: 367 MNLSAIPSEIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
             L+ +P EI     + +L L+ N ++  LP EL+ C+ L +
Sbjct: 506 NLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 547



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 29/247 (11%)

Query: 73  LNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           LN+ HN+++++P  I     +L  L++  N +  +P + G+ T++V+ + ++NQL ++P 
Sbjct: 360 LNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPE 419

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML--TEL 189
            +   ++L     SNN +  LP  L +  K+ +LD+E N      N  IA    L   +L
Sbjct: 420 DVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENXFDHCPNE-IAYLKDLQXNKL 478

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA-LSALPAE 248
           + + N L  +P  IG L+ L  L L +N +  +P  I    +L E Y+ +N  L +LP E
Sbjct: 479 VLTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFE 538

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEI--GKMTTLRKLLLT 306
           L   SKL                      S++ + N  LS LPP+I  G  + + + L  
Sbjct: 539 LALCSKL----------------------SIMSIENCPLSHLPPQIVAGGPSFIIQFLKM 576

Query: 307 GNPLRTL 313
             P R +
Sbjct: 577 QGPYRAM 583



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 2/203 (0%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           ++ D S   +  LPSS+     L++    +N + SLP ++     +  L +  N LT L 
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           ++L  +   L  L    N L  +P  +  L  L  L L  NRI ++   I     L+   
Sbjct: 163 DSL-DNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS 221

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIG 295
           +  N +  LPAE+G L  L TLD+  NQL+    E     +++ LDL +N L  LP  IG
Sbjct: 222 IRENKIKQLPAEIGDLCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIG 281

Query: 296 KMTTLRKLLLTGNPLRTLRSSLV 318
            +++L +L L  N L  +  SL 
Sbjct: 282 NLSSLSRLGLRYNRLSAIPRSLA 304



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 14/197 (7%)

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           +RLDL +  I  +PSSI     L E Y+ +N L +LPAE+G L  L TL L  N L    
Sbjct: 103 MRLDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLP 162

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                L +L +LDL +N L  +P  + ++ +L  L L  N + T+   + N    ++L  
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLS- 221

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
               + EN+  +      DL  + T        L +    L  +P EI    +IT LDL 
Sbjct: 222 ----IRENKIKQLPAEIGDLCNLIT--------LDVAHNQLEHLPKEIGNCTQITNLDLQ 269

Query: 389 RNSIQELPPELSSCASL 405
            N + +LP  + + +SL
Sbjct: 270 HNELLDLPDTIGNLSSL 286



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 86/204 (42%), Gaps = 39/204 (19%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +             W   V+L    LA N + K+ ED
Sbjct: 374 IFSRAKVLSKLNMKDNQLTSLPLDF----------GTWTSMVELN---LATNQLTKIPED 420

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV--KFDC 121
           +  L  L VL +S+N L +LP  +G L  L+ LD+  N     P+EI     L   K   
Sbjct: 421 VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENXFDHCPNEIAYLKDLQXNKLVL 480

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPED------------------------LA 157
           ++NQL  LP  +G   NL+      N +T LPE+                        LA
Sbjct: 481 TNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELA 540

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIA 181
            CSK+S + +E   L+ L   ++A
Sbjct: 541 LCSKLSIMSIENCPLSHLPPQIVA 564


>gi|440798242|gb|ELR19310.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 641

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 180/403 (44%), Gaps = 47/403 (11%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           ++ K+ +  GS  +   S   +  E   N  E  E  K  E  DL +L +       L +
Sbjct: 167 KLEKSDKRKGSARMPAPSQTKLTLEDLANLTEGAEVCKTMELCDLNRLEMT-----TLPD 221

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
            +  L  L +LN+  NKL+ LP AIG+L  L +L ++ NSI  +P E+G    L   D  
Sbjct: 222 KIGLLTNLKILNLYDNKLTALPPAIGKLTNLTALGLNENSISTLPPELGKLKNLQMLDLR 281

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            N+L  +P  +G  +        +N I+S    +A   K+  LD++ N L  L   L  S
Sbjct: 282 FNKLTAIPPEIGNLV----LDLQHNSISSFA-SVAKLEKLENLDIQYNNLETLPQGL-GS 335

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L    N +  +P  IG L +L  LDL  NR+  +P+ IS   +L + Y+  N L
Sbjct: 336 LKSLKRLHLKYNHIKELPREIGDLDKLEELDLEGNRLTGLPTEISKLKNLHKIYLSRNML 395

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           + LP ELG+L  L  L L+ NQL           L VLD+S+N L+ L P I  +T L +
Sbjct: 396 AELPDELGQLKSLEELFLNDNQLTNLGSVVMLPGLRVLDISSNELTKLTPSIAMLTNLHE 455

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L  + N L  L         P + + +  RL +  D+                       
Sbjct: 456 LHASANELTNL--------VPEIGQLVNLRLLDFNDNM---------------------- 485

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                 L+++P+EI     + KL+L  N ++ELPPE+     L
Sbjct: 486 ------LNSLPAEIGNLTSLKKLNLGGNLLKELPPEIGKLTGL 522



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 143/274 (52%), Gaps = 3/274 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L + +NN+E L + L +L  L  L++ +N + ELP  IG+L  L+ LD+  N +  +
Sbjct: 316 LENLDIQYNNLETLPQGLGSLKSLKRLHLKYNHIKELPREIGDLDKLEELDLEGNRLTGL 375

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EI     L K   S N L ELP  LG+  +L +   ++N +T+L   +     +  LD
Sbjct: 376 PTEISKLKNLHKIYLSRNMLAELPDELGQLKSLEELFLNDNQLTNLG-SVVMLPGLRVLD 434

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+LT L+ + IA  T L EL AS N L  +   IG L  L  LD + N + S+P+ I
Sbjct: 435 ISSNELTKLTPS-IAMLTNLHELHASANELTNLVPEIGQLVNLRLLDFNDNMLNSLPAEI 493

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNN 285
               SL +  +G N L  LP E+GKL+ L  L L+ N+L     +    L L+ L+L  N
Sbjct: 494 GNLTSLKKLNLGGNLLKELPPEIGKLTGLSCLLLNYNKLTTLTSQIGSLLSLTELNLDEN 553

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+ LP E+G M  L  L    N +  L  +L N
Sbjct: 554 KLTELPTEMGSMKGLEVLTFNDNDINDLPDTLYN 587



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 104/212 (49%), Gaps = 19/212 (8%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P+ IG L+ L  L+L+ N++ ++P +I    +L    +  N++S LP ELGKL  L  L
Sbjct: 219 LPDKIGLLTNLKILNLYDNKLTALPPAIGKLTNLTALGLNENSISTLPPELGKLKNLQML 278

Query: 259 DLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           DL  N+L     E   L   VLDL +NS+S     + K+  L  L +  N L TL   L 
Sbjct: 279 DLRFNKLTAIPPEIGNL---VLDLQHNSISSF-ASVAKLEKLENLDIQYNNLETLPQGL- 333

Query: 319 NGPTPALLKYL-RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                  LK L R  L  N   E      DL  +        +EL LEG  L+ +P+EI 
Sbjct: 334 -----GSLKSLKRLHLKYNHIKELPREIGDLDKL--------EELDLEGNRLTGLPTEIS 380

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           +   + K+ LSRN + ELP EL    SL+  F
Sbjct: 381 KLKNLHKIYLSRNMLAELPDELGQLKSLEELF 412



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 12/204 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L ++ N + KL   +  L  L  L+ S N+L+ L   IG+L  L+ LD + N +  +
Sbjct: 430 LRVLDISSNELTKLTPSIAMLTNLHELHASANELTNLVPEIGQLVNLRLLDFNDNMLNSL 489

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG+ T+L K +   N LKELP  +G+   LS    + N +T+L   +     +++L+
Sbjct: 490 PAEIGNLTSLKKLNLGGNLLKELPPEIGKLTGLSCLLLNYNKLTTLTSQIGSLLSLTELN 549

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL---------IRL-DLHQ 216
           ++ NKLT L   +  S   L  L  + N +N +P+T+ +L  L         IRL  +  
Sbjct: 550 LDENKLTELPTEM-GSMKGLEVLTFNDNDINDLPDTLYNLDNLSSPLWLFLRIRLFGMDD 608

Query: 217 NRILSIPSSISGCCSLAEF-YMGN 239
           N +  IP  I+   S A F Y+G+
Sbjct: 609 NPLEDIPQEITEGGSQAVFNYLGD 632



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 62/119 (52%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+ L    N +  L  ++ NL  L  LN+  N L ELP  IG+L  L  L +++N + 
Sbjct: 474 VNLRLLDFNDNMLNSLPAEIGNLTSLKKLNLGGNLLKELPPEIGKLTGLSCLLLNYNKLT 533

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
            +  +IGS  +L + +   N+L ELP+ +G    L     ++N I  LP+ L +   +S
Sbjct: 534 TLTSQIGSLLSLTELNLDENKLTELPTEMGSMKGLEVLTFNDNDINDLPDTLYNLDNLS 592


>gi|298244934|ref|ZP_06968740.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297552415|gb|EFH86280.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 353

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 92/280 (32%), Positives = 142/280 (50%), Gaps = 6/280 (2%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W+   L+ L L +N +  L E +  L  L  L++ +N+L+ LP  +  L  L+ LD++ N
Sbjct: 70  WQFSSLKNLYLTNNQLRTLPEQVSRLSSLQWLDLENNQLNSLPEQVRNLRDLQVLDLANN 129

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P EIG+ ++L       NQL  LP  +    NL     SNN + +LP  + + + 
Sbjct: 130 QLSSLPGEIGNLSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNNQLNTLPAKIDNLAS 189

Query: 162 MSKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           +  L ++ N+ + L   +   W +  L  L    N LN +P  IG+LS L  L L  +  
Sbjct: 190 LQSLALDNNQFSSLPGQV---WNLRNLQFLALGNNQLNSLPAEIGNLSELSSLHLRNSHF 246

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
            S+P  +     L    +  N LS+LPAE+G LS+L  LDL +NQ      E   L  L 
Sbjct: 247 SSLPRQVWNLSKLRHLGLTLNQLSSLPAEIGNLSELQWLDLSNNQFSSLPAEISNLSSLR 306

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L+LSNN  S LP EI  +++L+ L L  N  +TL + L+
Sbjct: 307 WLNLSNNQFSSLPKEISNLSSLQWLNLGDNLSQTLEAELI 346



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 140/306 (45%), Gaps = 38/306 (12%)

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           ++ +IP E+   ++L     ++NQL+ LP  + R  +L      NN + SLPE + +   
Sbjct: 61  NLTQIPSEVWQFSSLKNLYLTNNQLRTLPEQVSRLSSLQWLDLENNQLNSLPEQVRNLRD 120

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  LD+  N+L+ L    I + + L  L    N L+ +PE + +L  L  L L  N++ +
Sbjct: 121 LQVLDLANNQLSSLPGE-IGNLSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNNQLNT 179

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 280
           +P+ I    SL    + NN  S+LP ++  L  L  L L +NQL     E   L  LS L
Sbjct: 180 LPAKIDNLASLQSLALDNNQFSSLPGQVWNLRNLQFLALGNNQLNSLPAEIGNLSELSSL 239

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
            L N+  S LP ++  ++ LR L LT N L +L         PA +  L         SE
Sbjct: 240 HLRNSHFSSLPRQVWNLSKLRHLGLTLNQLSSL---------PAEIGNL---------SE 281

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                              + L L     S++P+EI     +  L+LS N    LP E+S
Sbjct: 282 L------------------QWLDLSNNQFSSLPAEISNLSSLRWLNLSNNQFSSLPKEIS 323

Query: 401 SCASLQ 406
           + +SLQ
Sbjct: 324 NLSSLQ 329



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 146/314 (46%), Gaps = 43/314 (13%)

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
           D+ G    L   +C+   L ++PS + +  +L +   +NN + +LPE ++  S +  LD+
Sbjct: 47  DKYGRVIRLHLCECN---LTQIPSEVWQFSSLKNLYLTNNQLRTLPEQVSRLSSLQWLDL 103

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
           E N+L                        N +PE + +L  L  LDL  N++ S+P  I 
Sbjct: 104 ENNQL------------------------NSLPEQVRNLRDLQVLDLANNQLSSLPGEIG 139

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNS 286
              SL   Y+G+N LS LP ++  L  L  L L +NQL     +   L  L  L L NN 
Sbjct: 140 NLSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNNQLNTLPAKIDNLASLQSLALDNNQ 199

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE 346
            S LP ++  +  L+ L L  N L +L + + N    + L +LR       +S  S+   
Sbjct: 200 FSSLPGQVWNLRNLQFLALGNNQLNSLPAEIGNLSELSSL-HLR-------NSHFSSLPR 251

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++       + L L    LS++P+EI    E+  LDLS N    LP E+S+ +SL 
Sbjct: 252 QVWNLSKL-----RHLGLTLNQLSSLPAEIGNLSELQWLDLSNNQFSSLPAEISNLSSL- 305

Query: 407 VKFSDLVTNKESCI 420
            ++ +L  N+ S +
Sbjct: 306 -RWLNLSNNQFSSL 318



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 13/169 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L N     +P +V             W   +LQ L L +N +  L  ++ NL  L+ 
Sbjct: 192 SLALDNNQFSSLPGQV-------------WNLRNLQFLALGNNQLNSLPAEIGNLSELSS 238

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ ++  S LP  +  L  L+ L ++ N +  +P EIG+ + L   D S+NQ   LP+ 
Sbjct: 239 LHLRNSHFSSLPRQVWNLSKLRHLGLTLNQLSSLPAEIGNLSELQWLDLSNNQFSSLPAE 298

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +    +L     SNN  +SLP+++++ S +  L++  N    L   LIA
Sbjct: 299 ISNLSSLRWLNLSNNQFSSLPKEISNLSSLQWLNLGDNLSQTLEAELIA 347


>gi|291238114|ref|XP_002738976.1| PREDICTED: PDZ-domain protein scribble-like [Saccoglossus
           kowalevskii]
          Length = 1478

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 178/356 (50%), Gaps = 42/356 (11%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEA--------VDLQKLI 51
           D + + AR+   L L    LR++    ++  N  + G  D   EA        ++L +L 
Sbjct: 30  DDVYRYARSLEELYLDANQLRELNRPFFRLLNIRKLGLSDNEIEALPPEVGNFMNLIELD 89

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           ++ N+I ++ E+++    L V + S N +S+LP    +L  L  L ++  S+ ++P +IG
Sbjct: 90  ISRNDIMEIPENIKFCKKLQVCDFSGNPISKLPDGFTQLRDLTHLCLNDVSLTRLPPDIG 149

Query: 112 SATALV-----------------------KFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           S + L+                       + D  SN+L+ELP +LG   NL +     N 
Sbjct: 150 SLSNLITLELRENLLKFLPTSLSFLVKLEQLDLGSNELEELPETLGALPNLMELWLDCNE 209

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T LP ++ + SK+  LDV  N+L  L    I     LT+L  S+N +  +PE IG+L +
Sbjct: 210 LTELPAEIGNLSKLMCLDVSENRLESLPEE-IGGLGNLTDLHLSQNCIERLPEGIGNLKQ 268

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           +  L + QNR++++ ++I  C  L E  +  N L  LPA +G L KL  L++  N+LK  
Sbjct: 269 MTILKIDQNRLVALTAAIGSCECLQELILTENLLQELPATIGLLKKLNNLNVDRNRLKSV 328

Query: 269 CVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN-----PLRTLRSSL 317
            +E   C  +L VL L  N L+ +P EIG +  L  L L+GN     PLR  + +L
Sbjct: 329 PIELGRCH-KLGVLSLRENMLTEIPSEIGSLKELHVLDLSGNRIEYLPLRIAQCNL 383



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 121/217 (55%), Gaps = 1/217 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N+L ELP  +G L  L  L +  N + ++P EIG+ + L+  D S N+L+ L
Sbjct: 177 LEQLDLGSNELEELPETLGALPNLMELWLDCNELTELPAEIGNLSKLMCLDVSENRLESL 236

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G   NL+D   S NCI  LPE + +  +M+ L ++ N+L  L+   I S   L EL
Sbjct: 237 PEEIGGLGNLTDLHLSQNCIERLPEGIGNLKQMTILKIDQNRLVALT-AAIGSCECLQEL 295

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
           I ++NLL  +P TIG L +L  L++ +NR+ S+P  +  C  L    +  N L+ +P+E+
Sbjct: 296 ILTENLLQELPATIGLLKKLNNLNVDRNRLKSVPIELGRCHKLGVLSLRENMLTEIPSEI 355

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
           G L +L  LDL  N+++   +   Q  L  L LS N 
Sbjct: 356 GSLKELHVLDLSGNRIEYLPLRIAQCNLKALWLSENQ 392



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 175/376 (46%), Gaps = 43/376 (11%)

Query: 54  HNNIEKLKEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           H N+  + +D+ R    L  L +  N+L EL      L  ++ L +S N I  +P E+G+
Sbjct: 22  HCNLTMIPDDVYRYARSLEELYLDANQLRELNRPFFRLLNIRKLGLSDNEIEALPPEVGN 81

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
              L++ D S N + E+P ++  C  L     S N I+ LP+       ++ L +    L
Sbjct: 82  FMNLIELDISRNDIMEIPENIKFCKKLQVCDFSGNPISKLPDGFTQLRDLTHLCLNDVSL 141

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           T L  + I S + L  L   +NLL  +P ++  L +L +LDL  N +  +P ++    +L
Sbjct: 142 TRLPPD-IGSLSNLITLELRENLLKFLPTSLSFLVKLEQLDLGSNELEELPETLGALPNL 200

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK------------------EYCVEACQ 274
            E ++  N L+ LPAE+G LSKL  LD+  N+L+                  + C+E   
Sbjct: 201 MELWLDCNELTELPAEIGNLSKLMCLDVSENRLESLPEEIGGLGNLTDLHLSQNCIERLP 260

Query: 275 ------LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
                  ++++L +  N L  L   IG    L++L+LT N L+ L +++       LLK 
Sbjct: 261 EGIGNLKQMTILKIDQNRLVALTAAIGSCECLQELILTENLLQELPATI------GLLKK 314

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLD 386
           L         +  +  +  L ++   L    K   LSL    L+ IPSEI    E+  LD
Sbjct: 315 L---------NNLNVDRNRLKSVPIELGRCHKLGVLSLRENMLTEIPSEIGSLKELHVLD 365

Query: 387 LSRNSIQELPPELSSC 402
           LS N I+ LP  ++ C
Sbjct: 366 LSGNRIEYLPLRIAQC 381



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 5/143 (3%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L+ N IE+L E + NL  +T+L +  N+L  L AAIG    L+ L ++ N + +
Sbjct: 245 NLTDLHLSQNCIERLPEGIGNLKQMTILKIDQNRLVALTAAIGSCECLQELILTENLLQE 304

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG    L   +   N+LK +P  LGRC  L       N +T +P ++    ++  L
Sbjct: 305 LPATIGLLKKLNNLNVDRNRLKSVPIELGRCHKLGVLSLRENMLTEIPSEIGSLKELHVL 364

Query: 166 DVEGNK-----LTVLSNNLIASW 183
           D+ GN+     L +   NL A W
Sbjct: 365 DLSGNRIEYLPLRIAQCNLKALW 387



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 124/282 (43%), Gaps = 49/282 (17%)

Query: 135 RCLNLSDFKASNNCI----------TSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASW 183
           RC+ L  F+A N  +          T +P+D+   ++ + +L ++ N+L  L N      
Sbjct: 3   RCIPL--FRACNRQVDIIERRHCNLTMIPDDVYRYARSLEELYLDANQLREL-NRPFFRL 59

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             + +L  S N +  +P  +G+   LI LD+ +N I+ IP +I  C  L       N +S
Sbjct: 60  LNIRKLGLSDNEIEALPPEVGNFMNLIELDISRNDIMEIPENIKFCKKLQVCDFSGNPIS 119

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
            LP    +L  L  L              C        L++ SL+ LPP+IG ++ L  L
Sbjct: 120 KLPDGFTQLRDLTHL--------------C--------LNDVSLTRLPPDIGSLSNLITL 157

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            L  N L+ L +SL       L+K  +  L  NE  E   T   L  +         EL 
Sbjct: 158 ELRENLLKFLPTSLS-----FLVKLEQLDLGSNELEELPETLGALPNLM--------ELW 204

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           L+   L+ +P+EI    ++  LD+S N ++ LP E+    +L
Sbjct: 205 LDCNELTELPAEIGNLSKLMCLDVSENRLESLPEEIGGLGNL 246


>gi|260788694|ref|XP_002589384.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
 gi|229274561|gb|EEN45395.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
          Length = 936

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 179/394 (45%), Gaps = 28/394 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN+ L  +P EV+             +  DL+ L +++N +  + E +  L  L  L
Sbjct: 18  LDLSNQDLTSIPEEVF-------------DITDLEFLDVSNNKLSSIPEAIGRLQKLYRL 64

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +   N L  LP AIG L  L  L V  N +  +P  I     L       NQL ++P  +
Sbjct: 65  DADGNMLKSLPQAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGV 124

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               +L    ASNN +++ P  +    K+ +L ++GN+LT +   +      L  L  S 
Sbjct: 125 CMLPSLEVLDASNNKLSTFPPGVEKLQKLRELGIDGNQLTEVPPGVFL-LPNLEVLDVSN 183

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L+  P  +  L +L  L ++ N++  +P  +    +L    + NN LSA P  + KL 
Sbjct: 184 NKLSTFPPGVKKLQKLRELRINDNQLTEVPPGVCSLPNLEVLNVDNNNLSAFPPGVEKLQ 243

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L ++ NQL E     C L  L  L + NN LS  PP + K+  LR L + GN L  
Sbjct: 244 KLRGLGINDNQLTEVPSGVCSLPNLEALGVGNNKLSTFPPGVEKLQKLRVLHIYGNQLTE 303

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           + S + + P   LL   +++L     S      E L  +        +EL +    L+ +
Sbjct: 304 VPSGVCSLPNLELLHVGKNKL-----STFPPGVEKLQKL--------RELHINDNQLTEV 350

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           PS +     +  L++S N I+ LP +++    L+
Sbjct: 351 PSGVCSLPNLELLNVSNNPIRRLPNDVTRLTRLK 384



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 127/292 (43%), Gaps = 15/292 (5%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           +K D S+  L  +P  +    +L     SNN ++S+PE +    K+ +LD +GN L  L 
Sbjct: 16  LKLDLSNQDLTSIPEEVFDITDLEFLDVSNNKLSSIPEAIGRLQKLYRLDADGNMLKSLP 75

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
              I S   LT L   +N L  +P  I  L +L  L +  N++  +P  +    SL    
Sbjct: 76  -QAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVCMLPSLEVLD 134

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
             NN LS  P  + KL KL  L +  NQL E       L  L VLD+SNN LS  PP + 
Sbjct: 135 ASNNKLSTFPPGVEKLQKLRELGIDGNQLTEVPPGVFLLPNLEVLDVSNNKLSTFPPGVK 194

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           K+  LR+L +  N L  +   + + P   +L         N D+   +     +    +L
Sbjct: 195 KLQKLRELRINDNQLTEVPPGVCSLPNLEVL---------NVDNNNLSAFPPGVEKLQKL 245

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
               + L +    L+ +PS +     +  L +  N +   PP +     L+V
Sbjct: 246 ----RGLGINDNQLTEVPSGVCSLPNLEALGVGNNKLSTFPPGVEKLQKLRV 293



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 137/296 (46%), Gaps = 28/296 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L + +N +      +  L  L VL++  N+L+E+P+ +  L  L+ L V  N +  
Sbjct: 267 NLEALGVGNNKLSTFPPGVEKLQKLRVLHIYGNQLTEVPSGVCSLPNLELLHVGKNKLST 326

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  +     L +   + NQL E+PS +    NL     SNN I  LP D+   +++  L
Sbjct: 327 FPPGVEKLQKLRELHINDNQLTEVPSGVCSLPNLELLNVSNNPIRRLPNDVTRLTRLKNL 386

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNL---LNGMPETIGSLSRLIRLDLHQNRILSI 222
           DV   +       ++   T L +L A +++    + +P+ +G+L  L  L L  N + ++
Sbjct: 387 DVHCCQFDEFPRQVLQLKT-LEKLYAGQSVGRKFDMVPDEVGNLQHLWYLALENNLLRTL 445

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           PS++S   +L E ++ NN     P  L                       C+L  +  LD
Sbjct: 446 PSTMSRLHNLREVHLWNNKFDTFPEVL-----------------------CELPAMEKLD 482

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
           +SNN+++ LP  + +   L+ L ++GNPL      +    T A++ +L+    ++E
Sbjct: 483 ISNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDVCEQGTGAIMAFLKQEAEKDE 538



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 89/212 (41%), Gaps = 17/212 (8%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           LN  P+T+      ++LDL    + SIP  +     L    + NN LS++P  +G+L KL
Sbjct: 5   LNLQPQTVNGR---LKLDLSNQDLTSIPEEVFDITDLEFLDVSNNKLSSIPEAIGRLQKL 61

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD   N LK        L +L+ L +  N L+ LPP I K+  L  L +  N L  + 
Sbjct: 62  YRLDADGNMLKSLPQAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVP 121

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +               LP  E  +AS  K              +EL ++G  L+ +P 
Sbjct: 122 PGVC-------------MLPSLEVLDASNNKLSTFPPGVEKLQKLRELGIDGNQLTEVPP 168

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            ++    +  LD+S N +   PP +     L+
Sbjct: 169 GVFLLPNLEVLDVSNNKLSTFPPGVKKLQKLR 200


>gi|440789613|gb|ELR10919.1| SAM domain (Sterile alpha motif) domain containing protein
           [Acanthamoeba castellanii str. Neff]
          Length = 979

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 176/390 (45%), Gaps = 53/390 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N++  L  +L  L  LT+L++ +NKL+ELPA I  L  L  L + +N + ++
Sbjct: 564 LKALGLNENSLRTLPNELGQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQL 623

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EIG   +L      +NQL +LP  L    NL     S N +T     +    ++  LD
Sbjct: 624 PEEIGCLVSLEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTKF-RSVEKLCQLKDLD 682

Query: 167 VEGNKLTVLSNNLIASWTMLTELI---ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           ++ NKLT L +     W  LT+L+    S+N L   P TI  L RL  LDL  N++  + 
Sbjct: 683 LKQNKLTTLPD----GWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEANQLTVLA 738

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
             I    SL   Y+G N L ALPAELG L+ L  L L  N+LK    E   L  L  LDL
Sbjct: 739 PEIGNMTSLRSLYLGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDL 798

Query: 283 SNNSLSGLPP-----------------------EIGKMTTLRKLLLTGNPLRTLRS--SL 317
           S N     P                        +IG +TTL++L L  N L  L    SL
Sbjct: 799 STNEFQTFPDARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISL 858

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSE 375
           + G T   + Y                  +L+T+   +   S  K+L LE   +  +P  
Sbjct: 859 LTGLTELRVGY-----------------NELLTLPHEIGDISLIKQLHLEHNKMVELPKS 901

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASL 405
           I     +    ++ N + +LP E+ +  SL
Sbjct: 902 IGNLSALELFVVTDNLLNDLPNEMVNMTSL 931



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 170/411 (41%), Gaps = 81/411 (19%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           WE  +L  L L  N IE L  DL  L  L  L ++ N L  LP  +G+L  L  LD+ +N
Sbjct: 536 WEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNENSLRTLPNELGQLTSLTMLDLRYN 595

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            + ++P  I     L K     N+L++LP  +G  ++L      NN +  LP  L+  + 
Sbjct: 596 KLTELPATIKHLVHLNKLFLRYNRLEQLPEEIGCLVSLEMLSVRNNQLHKLPRKLSMATN 655

Query: 162 MSKLDVEGNKLTVLSN------------------NLIASWTMLTELI---ASKNLLNGMP 200
           +  LD+  N LT   +                   L   W  LT+L+    S+N L   P
Sbjct: 656 LKILDISTNHLTKFRSVEKLCQLKDLDLKQNKLTTLPDGWGALTDLMRLDVSQNKLEEFP 715

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
            TI  L RL  LDL  N++  +   I    SL   Y+G N L ALPAELG L+ L  L L
Sbjct: 716 VTITELPRLETLDLEANQLTVLAPEIGNMTSLRSLYLGRNKLIALPAELGMLTGLRELHL 775

Query: 261 HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPP-----------------------EIGK 296
             N+LK    E   L  L  LDLS N     P                        +IG 
Sbjct: 776 KGNRLKAIPPELSALVNLKHLDLSTNEFQTFPDARCFPPALNSLNMSDNQMKRLSNQIGA 835

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +TTL++L L  N L                     RLP     E S     L+T  T L 
Sbjct: 836 LTTLKQLNLDENQL--------------------DRLP----GEIS-----LLTGLTELR 866

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           V   E       L  +P EI +   I +L L  N + ELP  + + ++L++
Sbjct: 867 VGYNE-------LLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSALEL 910



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 169/352 (48%), Gaps = 25/352 (7%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L+VLN+  NK+  LP  +G+L  LK+L ++ NS+  +P+E+G  T+L   D   N+L EL
Sbjct: 541 LSVLNLYMNKIESLPPDLGKLTKLKALGLNENSLRTLPNELGQLTSLTMLDLRYNKLTEL 600

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+++   ++L+      N +  LPE++     +  L V  N+L  L   L  + T L  L
Sbjct: 601 PATIKHLVHLNKLFLRYNRLEQLPEEIGCLVSLEMLSVRNNQLHKLPRKLSMA-TNLKIL 659

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L     ++  L +L  LDL QN++ ++P        L    +  N L   P  +
Sbjct: 660 DISTNHLTKF-RSVEKLCQLKDLDLKQNKLTTLPDGWGALTDLMRLDVSQNKLEEFPVTI 718

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            +L +L TLDL +NQL     E   +  L  L L  N L  LP E+G +T LR+L L GN
Sbjct: 719 TELPRLETLDLEANQLTVLAPEIGNMTSLRSLYLGRNKLIALPAELGMLTGLRELHLKGN 778

Query: 309 PLRTLR---SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
            L+ +    S+LVN      LK+L          + ST +      A         L++ 
Sbjct: 779 RLKAIPPELSALVN------LKHL----------DLSTNEFQTFPDARCFPPALNSLNMS 822

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS---SCASLQVKFSDLVT 414
              +  + ++I     + +L+L  N +  LP E+S       L+V +++L+T
Sbjct: 823 DNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISLLTGLTELRVGYNELLT 874



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 134/280 (47%), Gaps = 25/280 (8%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D W    DL +L ++ N +E+    +  LP L  L++  N+L+ L   IG +  L+SL +
Sbjct: 693 DGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEANQLTVLAPEIGNMTSLRSLYL 752

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N ++ +P E+G  T L +     N+LK +P  L   +NL     S N   + P+    
Sbjct: 753 GRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDLSTNEFQTFPDARCF 812

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              ++ L++  N++  LSN                         IG+L+ L +L+L +N+
Sbjct: 813 PPALNSLNMSDNQMKRLSNQ------------------------IGALTTLKQLNLDENQ 848

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           +  +P  IS    L E  +G N L  LP E+G +S +  L L  N++ E       L  L
Sbjct: 849 LDRLPGEISLLTGLTELRVGYNELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSAL 908

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            +  +++N L+ LP E+  MT+L +L + GNP   L +++
Sbjct: 909 ELFVVTDNLLNDLPNEMVNMTSLSELKVDGNPFDNLPAAV 948


>gi|418726507|ref|ZP_13285118.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960417|gb|EKO24171.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 595

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 176/395 (44%), Gaps = 47/395 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTVLPKEIEQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL     S N +T+LP+++     +  LD++ N+ T L                  
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTL------------------ 201

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+ IG L  L  L+L  N++ ++P  I    +L E Y+ NN L+  P E+G+L 
Sbjct: 202 ------PKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQ 255

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L    N+L     E  QL+ L  L+L NN L+  P EIG++  L+ L L  NP   
Sbjct: 256 NLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPFSL 315

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS-A 371
                +    P       S L   E +E    +   + +A    +   ELSLE  + S +
Sbjct: 316 KERKRIQKLFPD------SNLDLREVAENGVYRN--LNLAQEEPLKVFELSLEYKDFSQS 367

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            P  I +   +  L+L       LP E+S   +L+
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLK 402



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 162/390 (41%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N  +                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPFSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFLKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    +              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLTAEIGQLQ------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 563



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 134/294 (45%), Gaps = 43/294 (14%)

Query: 17  SNRSLRDVP-NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIE----KLKEDLRNLPLLT 71
           SN  LR+V  N VY+N + A E     E + + +L L + +      K+    RNL    
Sbjct: 328 SNLDLREVAENGVYRNLNLAQE-----EPLKVFELSLEYKDFSQSFPKVILKFRNL---R 379

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            LN+     S LP  I  L  LK L +  N +  IP EIG    L   +  +N+L+ LP 
Sbjct: 380 GLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPK 439

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T          T L E   
Sbjct: 440 EIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFT----------TFLKE--- 486

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                      IG L  L  L+L +N++ ++ + I    +L E  + +N  + LP E+GK
Sbjct: 487 -----------IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGK 535

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           L KL TLDL +NQL     E  QL+ L  L L NN LS     + +   +RKLL
Sbjct: 536 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS-----LKEQERIRKLL 584



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 131/282 (46%), Gaps = 38/282 (13%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +T+LP+++     + +L+++ N LTVL    I     L EL    N
Sbjct: 51  RVLNLSGEK-----LTALPKEIGQLKNLQELNLKWNLLTVLPKE-IEQLENLQELDLRDN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L   P  I  L +L  LDL +NR++ +P+ I    +L +  +  N L+  P E+G+L  
Sbjct: 105 QLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQN 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L L  N+L     E  QL+ L  LDL +N  + LP EIG++  L+ L L  N L TL
Sbjct: 165 LQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATL 224

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL-SLEGMN---- 368
                    P  +  L++              ++L     RL+V  KE+  L+ +     
Sbjct: 225 ---------PVEIGQLQNL-------------QELYLRNNRLTVFPKEIGQLQNLQMLCS 262

Query: 369 ----LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
               L+A+P E+ +   +  L+L  N +   P E+    +LQ
Sbjct: 263 PENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQ 304


>gi|358419356|ref|XP_003584212.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Bos taurus]
          Length = 1052

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 148/295 (50%), Gaps = 28/295 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSI 103
           D++ L L +N +E++ + L + L  L VL +  N+ ++LP A+ EL H L  LDVS N +
Sbjct: 62  DIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSHNRL 121

Query: 104 MKIPDE-IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
             +  E +G+   L K + S NQL  LP+ LG  ++L +   S N +  LP+  A  S++
Sbjct: 122 SVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSFAGLSRL 181

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    + ++
Sbjct: 182 RTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 240

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-------------- 268
           PS      SL    + NN L ALPA+  +L +L  L+L SN L+E+              
Sbjct: 241 PSGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELY 300

Query: 269 ----------CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                     C+ +   RL  L L NN +  LP  I ++T L +L+L GN +  L
Sbjct: 301 LSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVL 355



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 134/280 (47%), Gaps = 28/280 (10%)

Query: 66  NLPLLTVLNVSH------------------------NKLSELPAAIGEL-HMLKSLDVSF 100
           N+  + VLN+ +                        N+ ++LP A+ EL H L  LDVS 
Sbjct: 59  NIGDIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSH 118

Query: 101 NSIMKIPDE-IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           N +  +  E +G+   L K + S NQL  LP+ LG  ++L +   S N +  LP+  A  
Sbjct: 119 NRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSFAGL 178

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           S++  LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    +
Sbjct: 179 SRLRTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALRALKILWLSGAEL 237

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
            ++PS      SL    + NN L ALPA+  +L +L  L+L SN L+E+      L  L 
Sbjct: 238 GTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLE 297

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L LS N L+ +P  I  +  L  L L  N +R L  S+V
Sbjct: 298 ELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIV 337



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 132/268 (49%), Gaps = 7/268 (2%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L +L ++HN +  L  E +  L  L  LN+SHN+L  LPA +G L  L+ LDVSFN +  
Sbjct: 111 LTELDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAH 170

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PD     + L   D   NQL   P  L + + L +   S+N +  LPED++    +  L
Sbjct: 171 LPDSFAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKIL 230

Query: 166 DVEGNKLTVLSNNL--IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            + G +L  L +    +AS   L  L+   N L  +P     L RL  L+L  N +   P
Sbjct: 231 WLSGAELGTLPSGFCELAS---LESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFP 287

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
           +++     L E Y+  N L+++P  +  L +L TL L +N+++       +L  L  L L
Sbjct: 288 AALLPLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVL 347

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             N ++ LP   G+++ +    +  NPL
Sbjct: 348 QGNQIAVLPDNFGQLSRVGLWKIKDNPL 375



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 120/264 (45%), Gaps = 4/264 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L ++ N +  L +    L  L  L+V HN+L+  P  + +L  L+ LDVS N + 
Sbjct: 156 VHLEELDVSFNRLAHLPDSFAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLR 215

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P++I +  AL     S  +L  LPS      +L      NN + +LP   +   ++  
Sbjct: 216 GLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKM 275

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N L      L+     L EL  S+N L  +P  I  L RL+ L L  NRI  +P 
Sbjct: 276 LNLSSNLLEEFPAALL-PLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPD 334

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
           SI     L E  +  N ++ LP   G+LS++G   +  N L +   E C   +  +    
Sbjct: 335 SIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAYQ 394

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGN 308
             L+   P +       KLLL G 
Sbjct: 395 KELAHSQPAVQPRL---KLLLMGQ 415



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 131/296 (44%), Gaps = 42/296 (14%)

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLN-LSDFKASNNCITSLPEDLADCSK- 161
           + +P  IG    L   +  +N L+E+P  LG  L  L       N    LP+ +A+    
Sbjct: 54  LXLPANIGDIEVL---NLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHH 110

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +++LDV  N+L+VL    + +   L +L  S N L  +P  +G+L  L  LD+  NR+  
Sbjct: 111 LTELDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAH 170

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 280
           +P S +G                       LS+L TLD+  NQL  +  +  QL  L  L
Sbjct: 171 LPDSFAG-----------------------LSRLRTLDVDHNQLTAFPRQLLQLVALEEL 207

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           D+S+N L GLP +I  +  L+ L L+G  L TL S          L  L S + +N    
Sbjct: 208 DVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCE------LASLESLMLDNNGLR 261

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           A      L    +RL    K L+L    L   P+ +     + +L LSRN +  +P
Sbjct: 262 A------LPAQFSRLQRL-KMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVP 310



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 17/175 (9%)

Query: 237 MGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 293
           +GNN L  +P  LG  L  L  L L  N+  +      +L   L+ LD+S+N LS L  E
Sbjct: 68  LGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSHNRLSVLGAE 127

Query: 294 -IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            +G +  LRKL L+ N L  L + L        L    +RL    DS A  ++       
Sbjct: 128 AVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSFAGLSR------- 180

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
                  + L ++   L+A P ++ +   + +LD+S N ++ LP ++S+  +L++
Sbjct: 181 ------LRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKI 229


>gi|344264787|ref|XP_003404471.1| PREDICTED: leucine-rich repeat-containing protein 1 [Loxodonta
           africana]
          Length = 524

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 189/400 (47%), Gaps = 49/400 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + AR+   L L    LR++P             +++++ V L+KL L+ N I++L 
Sbjct: 29  EEIYRYARSLEELLLDANQLRELP-------------EQFFQLVRLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I 
Sbjct: 136 NDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPES-IG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N 
Sbjct: 195 ALVHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L  +P  +GKL KL                      S+L +  N L+ LP   G   +L 
Sbjct: 255 LETIPDGIGKLKKL----------------------SILKVDQNRLTQLPEATGDCESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V    
Sbjct: 293 ELVLTENRLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             +    L+ IP+E+ +A E+  LD++ N +  LP  L++
Sbjct: 340 FCVRDNRLTRIPAELSQATELHVLDVAGNRLLHLPLSLTT 379



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 136/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALVHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+  +L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L          LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KVDQNRLTQLPEA-TGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAEL + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCVRDNRLTRIPAELSQATELHVLDVAGNRLLHLPLSLTTLKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 156/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVRLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQIADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I S+P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALVHLKDLWLDGNQLSELPQEIGNLKSL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L T+  
Sbjct: 223 ------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPD 260

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA+   E L            EL L    L  +P  
Sbjct: 261 GIGKLKKLSILKVDQNRL--TQLPEATGDCESLT-----------ELVLTENRLLTLPKS 307

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 308 IGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 339



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 104/234 (44%), Gaps = 22/234 (9%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L RL +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVRLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE--DSEASTTKEDLITMATRLSVTSKEL 362
           L  N L  L         P  L  LR RL E +  ++E  +  E +  +     V  K+L
Sbjct: 158 LRENLLTYL---------PDSLTQLR-RLEELDLGNNEIYSLPESIGAL-----VHLKDL 202

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
            L+G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 203 WLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|410940039|ref|ZP_11371859.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410784848|gb|EKR73819.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 473

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 174/385 (45%), Gaps = 36/385 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L   N+  L +++  L  L  LN+S+N+L  LP  IG+L  LK L +  N +  
Sbjct: 74  NLESLRLDGENLTTLPKEIGRLQKLEYLNLSNNRLVTLPQEIGQLQKLKELSLEKNQLTT 133

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L K + S+N+L  LP  +G+   L +     N +T+LP+++    K+  L
Sbjct: 134 LPKEIGRLQNLQKINLSNNRLVTLPREIGKLQKLKELYLEKNQLTTLPKEIGKLKKLKNL 193

Query: 166 DVEGNKLTV---------------LSNNLIAS-------WTMLTELIASKNLLNGMPETI 203
            +  N+LT+               L NN +A+          L  L  S N    +P+ I
Sbjct: 194 YICDNQLTILPEEVIQLQELEELSLDNNQLATLPKKIGRLQKLKLLFLSDNQFVILPKEI 253

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L  L  L L  N++ ++P  I     L    + NN     P  +G+L KL  L L  N
Sbjct: 254 GQLQELEHLSLDDNQLATLPKGIGKLQKLENLSLSNNRFVVFPKAIGRLQKLKALYLSDN 313

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           QL     ++  L +L  L L++N  +  P E+ ++  L+ L L GN    L   +  G  
Sbjct: 314 QLAILSEQSLHLQKLEYLHLNHNRFTTFPKEVQQLQNLKDLHLNGNQFTILPQGI--GQL 371

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
              L+YL        D+   T     I    +L    KELSL+   L+ +P  I +  ++
Sbjct: 372 QK-LEYLFL------DNNQLTILPQGIGKLQKL----KELSLDNNQLTILPKGIGKLQKL 420

Query: 383 TKLDLSRNSIQELPPELSSCASLQV 407
             L+LS N +  LP E+    +L  
Sbjct: 421 EYLNLSNNQLTTLPKEIRKLQNLHF 445



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 169/382 (44%), Gaps = 20/382 (5%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N  Y N ++A         +D+  L L  + +  L +++  L  L  L +    L+ LP 
Sbjct: 36  NGTYYNLNKA-----LQNPLDVLALELYDSQLTTLPKEIEQLQNLESLRLDGENLTTLPK 90

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            IG L  L+ L++S N ++ +P EIG    L +     NQL  LP  +GR  NL     S
Sbjct: 91  EIGRLQKLEYLNLSNNRLVTLPQEIGQLQKLKELSLEKNQLTTLPKEIGRLQNLQKINLS 150

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           NN + +LP ++    K+ +L +E N+LT L    I     L  L    N L  +PE +  
Sbjct: 151 NNRLVTLPREIGKLQKLKELYLEKNQLTTLPKE-IGKLKKLKNLYICDNQLTILPEEVIQ 209

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  L  L L  N++ ++P  I     L   ++ +N    LP E+G+L +L  L L  NQL
Sbjct: 210 LQELEELSLDNNQLATLPKKIGRLQKLKLLFLSDNQFVILPKEIGQLQELEHLSLDDNQL 269

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
                   +L +L  L LSNN     P  IG++  L+ L L+ N L  L    ++     
Sbjct: 270 ATLPKGIGKLQKLENLSLSNNRFVVFPKAIGRLQKLKALYLSDNQLAILSEQSLHLQK-- 327

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
            L+YL      N +   +  KE  +     L    K+L L G   + +P  I +  ++  
Sbjct: 328 -LEYLHL----NHNRFTTFPKE--VQQLQNL----KDLHLNGNQFTILPQGIGQLQKLEY 376

Query: 385 LDLSRNSIQELPPELSSCASLQ 406
           L L  N +  LP  +     L+
Sbjct: 377 LFLDNNQLTILPQGIGKLQKLK 398



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 126/264 (47%), Gaps = 2/264 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L +  N +  L E++  L  L  L++ +N+L+ LP  IG L  LK L +S N  + +
Sbjct: 190 LKNLYICDNQLTILPEEVIQLQELEELSLDNNQLATLPKKIGRLQKLKLLFLSDNQFVIL 249

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L       NQL  LP  +G+   L +   SNN     P+ +    K+  L 
Sbjct: 250 PKEIGQLQELEHLSLDDNQLATLPKGIGKLQKLENLSLSNNRFVVFPKAIGRLQKLKALY 309

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L +LS   +     L  L  + N     P+ +  L  L  L L+ N+   +P  I
Sbjct: 310 LSDNQLAILSEQSL-HLQKLEYLHLNHNRFTTFPKEVQQLQNLKDLHLNGNQFTILPQGI 368

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
                L   ++ NN L+ LP  +GKL KL  L L +NQL        +L +L  L+LSNN
Sbjct: 369 GQLQKLEYLFLDNNQLTILPQGIGKLQKLKELSLDNNQLTILPKGIGKLQKLEYLNLSNN 428

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNP 309
            L+ LP EI K+  L  L L G P
Sbjct: 429 QLTTLPKEIRKLQNLHFLGLEGMP 452



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 11/148 (7%)

Query: 43  EAVDLQKL---ILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           +++ LQKL    L HN      ++++ L  L  L+++ N+ + LP  IG+L  L+ L + 
Sbjct: 321 QSLHLQKLEYLHLNHNRFTTFPKEVQQLQNLKDLHLNGNQFTILPQGIGQLQKLEYLFLD 380

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N +  +P  IG    L +    +NQL  LP  +G+   L     SNN +T+LP+++   
Sbjct: 381 NNQLTILPQGIGKLQKLKELSLDNNQLTILPKGIGKLQKLEYLNLSNNQLTTLPKEIRKL 440

Query: 160 SKMSKLDVEG--------NKLTVLSNNL 179
             +  L +EG        NK+ +L  NL
Sbjct: 441 QNLHFLGLEGMPALNSQKNKIEILFPNL 468


>gi|42408795|dbj|BAD10056.1| putative PSR9 [Oryza sativa Japonica Group]
 gi|125562149|gb|EAZ07597.1| hypothetical protein OsI_29848 [Oryza sativa Indica Group]
          Length = 576

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 15/312 (4%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K    ++LQ  ++A   IE L + +  L  L  L++S N+L  LP AIG+L  L  LD+ 
Sbjct: 247 KGARDLNLQGKLMAQ--IEWLPDSIGKLTGLVTLDISENRLLALPDAIGKLFSLAKLDIH 304

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N I ++P+ IG   +L+  +   NQL  LPSS+GR LNL +    +N ++SLP+ +   
Sbjct: 305 ANRISQLPESIGDLRSLIYLNMRGNQLSSLPSSIGRLLNLEELDVGSNGLSSLPDSIGSL 364

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           +++ KL VE N L  L    I     L EL A  N L  +PE +G L  L  L +  N +
Sbjct: 365 TRLKKLIVETNDLDELPYT-IGHCVSLVELQAGYNHLKALPEAVGKLEPLEILSVRYNNL 423

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN----QLKEYCVEACQL 275
            S+P++++    L E  +  N L ++P      + L  L++ +N    Q     +   ++
Sbjct: 424 RSLPTTMASLTKLKEVDVSFNELESIPENFCFATSLIKLNVGNNFADLQYLPRSIGNLEM 483

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L  LD+SNN +  LP   G +  LR L    NPL+     +      A+++Y+      
Sbjct: 484 -LEELDMSNNQIRVLPDSFGNLKHLRVLRAEENPLQVPPRDIALKGAQAVVQYM------ 536

Query: 336 NEDSEASTTKED 347
             D+   TTK +
Sbjct: 537 -SDASKRTTKSE 547



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 41/236 (17%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P++IG L+ L+ LD+ +NR+L++P +I    SLA+  +  N +S LP  +G L  L  L
Sbjct: 265 LPDSIGKLTGLVTLDISENRLLALPDAIGKLFSLAKLDIHANRISQLPESIGDLRSLIYL 324

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           ++  NQL        +L  L  LD+ +N LS LP  IG +T L+KL++  N L  L    
Sbjct: 325 NMRGNQLSSLPSSIGRLLNLEELDVGSNGLSSLPDSIGSLTRLKKLIVETNDLDEL---- 380

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                P  + +                            V+  EL     +L A+P  + 
Sbjct: 381 -----PYTIGH---------------------------CVSLVELQAGYNHLKALPEAVG 408

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQ---VKFSDLVTNKES-CISGCYLYWNL 429
           +   +  L +  N+++ LP  ++S   L+   V F++L +  E+ C +   +  N+
Sbjct: 409 KLEPLEILSVRYNNLRSLPTTMASLTKLKEVDVSFNELESIPENFCFATSLIKLNV 464


>gi|359080498|ref|XP_003588007.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Bos taurus]
          Length = 1026

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 148/295 (50%), Gaps = 28/295 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSI 103
           D++ L L +N +E++ + L + L  L VL +  N+ ++LP A+ EL H L  LDVS N +
Sbjct: 36  DIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSHNRL 95

Query: 104 MKIPDE-IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
             +  E +G+   L K + S NQL  LP+ LG  ++L +   S N +  LP+  A  S++
Sbjct: 96  SVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSFAGLSRL 155

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    + ++
Sbjct: 156 RTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 214

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY-------------- 268
           PS      SL    + NN L ALPA+  +L +L  L+L SN L+E+              
Sbjct: 215 PSGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELY 274

Query: 269 ----------CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                     C+ +   RL  L L NN +  LP  I ++T L +L+L GN +  L
Sbjct: 275 LSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVL 329



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 132/276 (47%), Gaps = 28/276 (10%)

Query: 70  LTVLNVSH------------------------NKLSELPAAIGEL-HMLKSLDVSFNSIM 104
           + VLN+ +                        N+ ++LP A+ EL H L  LDVS N + 
Sbjct: 37  IEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSHNRLS 96

Query: 105 KIPDE-IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
            +  E +G+   L K + S NQL  LP+ LG  ++L +   S N +  LP+  A  S++ 
Sbjct: 97  VLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSFAGLSRLR 156

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    + ++P
Sbjct: 157 TLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLP 215

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
           S      SL    + NN L ALPA+  +L +L  L+L SN L+E+      L  L  L L
Sbjct: 216 SGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYL 275

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           S N L+ +P  I  +  L  L L  N +R L  S+V
Sbjct: 276 SRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIV 311



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 132/268 (49%), Gaps = 7/268 (2%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L +L ++HN +  L  E +  L  L  LN+SHN+L  LPA +G L  L+ LDVSFN +  
Sbjct: 85  LTELDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAH 144

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PD     + L   D   NQL   P  L + + L +   S+N +  LPED++    +  L
Sbjct: 145 LPDSFAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKIL 204

Query: 166 DVEGNKLTVLSNNL--IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            + G +L  L +    +AS   L  L+   N L  +P     L RL  L+L  N +   P
Sbjct: 205 WLSGAELGTLPSGFCELAS---LESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFP 261

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
           +++     L E Y+  N L+++P  +  L +L TL L +N+++       +L  L  L L
Sbjct: 262 AALLPLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVL 321

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             N ++ LP   G+++ +    +  NPL
Sbjct: 322 QGNQIAVLPDNFGQLSRVGLWKIKDNPL 349



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 120/264 (45%), Gaps = 4/264 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L ++ N +  L +    L  L  L+V HN+L+  P  + +L  L+ LDVS N + 
Sbjct: 130 VHLEELDVSFNRLAHLPDSFAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLR 189

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P++I +  AL     S  +L  LPS      +L      NN + +LP   +   ++  
Sbjct: 190 GLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKM 249

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N L      L+     L EL  S+N L  +P  I  L RL+ L L  NRI  +P 
Sbjct: 250 LNLSSNLLEEFPAALL-PLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPD 308

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
           SI     L E  +  N ++ LP   G+LS++G   +  N L +   E C   +  +    
Sbjct: 309 SIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAYQ 368

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGN 308
             L+   P +       KLLL G 
Sbjct: 369 KELAHSQPAVQPRL---KLLLMGQ 389



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 129/293 (44%), Gaps = 42/293 (14%)

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLN-LSDFKASNNCITSLPEDLADCSK-MSK 164
           P  IG    L   +  +N L+E+P  LG  L  L       N    LP+ +A+    +++
Sbjct: 31  PANIGDIEVL---NLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTE 87

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LDV  N+L+VL    + +   L +L  S N L  +P  +G+L  L  LD+  NR+  +P 
Sbjct: 88  LDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPD 147

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
           S +G                       LS+L TLD+  NQL  +  +  QL  L  LD+S
Sbjct: 148 SFAG-----------------------LSRLRTLDVDHNQLTAFPRQLLQLVALEELDVS 184

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           +N L GLP +I  +  L+ L L+G  L TL S          L  L S + +N    A  
Sbjct: 185 SNRLRGLPEDISALRALKILWLSGAELGTLPSGFCE------LASLESLMLDNNGLRA-- 236

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
               L    +RL    K L+L    L   P+ +     + +L LSRN +  +P
Sbjct: 237 ----LPAQFSRLQ-RLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVP 284



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 17/175 (9%)

Query: 237 MGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 293
           +GNN L  +P  LG  L  L  L L  N+  +      +L   L+ LD+S+N LS L  E
Sbjct: 42  LGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSHNRLSVLGAE 101

Query: 294 -IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            +G +  LRKL L+ N L  L + L        L    +RL    DS A  ++       
Sbjct: 102 AVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSFAGLSR------- 154

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
                  + L ++   L+A P ++ +   + +LD+S N ++ LP ++S+  +L++
Sbjct: 155 ------LRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKI 203


>gi|125603982|gb|EAZ43307.1| hypothetical protein OsJ_27903 [Oryza sativa Japonica Group]
          Length = 576

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 15/312 (4%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K    ++LQ  ++A   IE L + +  L  L  L++S N+L  LP AIG+L  L  LD+ 
Sbjct: 247 KGARDLNLQGKLMAQ--IEWLPDSIGKLTGLVTLDISENRLLALPDAIGKLFSLAKLDIH 304

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N I ++P+ IG   +L+  +   NQL  LPSS+GR LNL +    +N ++SLP+ +   
Sbjct: 305 ANRISQLPESIGDLRSLIYLNMRGNQLSSLPSSIGRLLNLEELDVGSNGLSSLPDSIGSL 364

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           +++ KL VE N L  L    I     L EL A  N L  +PE +G L  L  L +  N +
Sbjct: 365 TRLKKLIVETNDLDELPYT-IGHCVSLVELQAGYNHLKALPEAVGKLEPLEILSVRYNNL 423

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN----QLKEYCVEACQL 275
            S+P++++    L E  +  N L ++P      + L  L++ +N    Q     +   ++
Sbjct: 424 RSLPTTMASLTKLKEVDVSFNELESIPENFCFATSLIKLNVGNNFADLQYLPRSIGNLEM 483

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L  LD+SNN +  LP   G +  LR L    NPL+     +      A+++Y+      
Sbjct: 484 -LEELDMSNNQIRVLPDSFGNLKHLRVLRAEENPLQVPPRDIALKGAQAVVQYM------ 536

Query: 336 NEDSEASTTKED 347
             D+   TTK +
Sbjct: 537 -SDASKRTTKSE 547



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 41/236 (17%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P++IG L+ L+ LD+ +NR+L++P +I    SLA+  +  N +S LP  +G L  L  L
Sbjct: 265 LPDSIGKLTGLVTLDISENRLLALPDAIGKLFSLAKLDIHANRISQLPESIGDLRSLIYL 324

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           ++  NQL        +L  L  LD+ +N LS LP  IG +T L+KL++  N L  L    
Sbjct: 325 NMRGNQLSSLPSSIGRLLNLEELDVGSNGLSSLPDSIGSLTRLKKLIVETNDLDEL---- 380

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                P  + +                            V+  EL     +L A+P  + 
Sbjct: 381 -----PYTIGH---------------------------CVSLVELQAGYNHLKALPEAVG 408

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQ---VKFSDLVTNKES-CISGCYLYWNL 429
           +   +  L +  N+++ LP  ++S   L+   V F++L +  E+ C +   +  N+
Sbjct: 409 KLEPLEILSVRYNNLRSLPTTMASLTKLKEVDVSFNELESIPENFCFATSLIKLNV 464


>gi|456825279|gb|EMF73675.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 595

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 168/364 (46%), Gaps = 11/364 (3%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTVLPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+  P E+G+L  L  L    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+  P EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 287 NNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAENGV 340

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLS-AIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
            +   + +A    +   ELSLE  + S + P  I +   +  L+L       LP E+S  
Sbjct: 341 YRN--LNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRL 398

Query: 403 ASLQ 406
            +L+
Sbjct: 399 KNLK 402



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 132/294 (44%), Gaps = 43/294 (14%)

Query: 17  SNRSLRDVP-NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIE----KLKEDLRNLPLLT 71
           SN  LR+V  N VY+N + A E     E + + +L L + +      K+    RNL    
Sbjct: 328 SNLDLREVAENGVYRNLNLAQE-----EPLKVFELSLEYKDFSQSFPKVILKFRNL---R 379

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            LN+     S LP  I  L  LK L +  N +  IP EIG    L   +  +N+L+ LP 
Sbjct: 380 GLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPK 439

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 440 EIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 482

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++P+ I    +L E  + +N  + LP E+GK
Sbjct: 483 -------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGK 535

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           L KL TLDL +NQL     E  QL+ L  L L NN  S       +   +RKLL
Sbjct: 536 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS-----FEEQERIRKLL 584



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 163/390 (41%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+  N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 563



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 177/452 (39%), Gaps = 69/452 (15%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKW----------WEAVDLQKLILAHNNIEKLK 61
           LNLS   L  +P E+   KN  E     KW           +  +LQ+L L  N +    
Sbjct: 53  LNLSGEKLTVLPKEIGQLKNLQELN--LKWNLLTVLPKEIGQLENLQELDLRDNQLATFP 110

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
             +  L  L  L++S N+L  LP  IG L  L+ L +  N +   P EIG    L K   
Sbjct: 111 AVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWL 170

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S N+L  LP  +G+  NL      +N  T+LP+++     +  L+++ N+L  L    I 
Sbjct: 171 SENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVE-IG 229

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L   P+ IG L  L  L   +NR+ ++P  +    +L    + NN 
Sbjct: 230 QLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNR 289

Query: 242 LSALPAELGKLSKLGTLDLHSNQL----------------------------------KE 267
           L+  P E+G+L  L  L+L  N L                                  +E
Sbjct: 290 LTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQE 349

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             ++  +L L   D S       P  I K   LR L L      TL   +        LK
Sbjct: 350 EPLKVFELSLEYKDFS----QSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKN---LK 402

Query: 328 YLRSRLP--ENEDSEASTTK--EDLITMATRLSVTSKE---------LSLEGMNLSAIPS 374
           YL   L   +N  SE    K  E L   A  L    KE         LSL    L   P+
Sbjct: 403 YLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPA 462

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           EI +  ++ KLDLS N     P E+    +LQ
Sbjct: 463 EIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494


>gi|410939195|ref|ZP_11371030.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410785700|gb|EKR74656.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 410

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 134/269 (49%), Gaps = 2/269 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  + +  L +++  L  L  L ++ N+LS LP  IG+L  LK L +S N +  
Sbjct: 73  NLRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSLPQEIGQLQNLKRLFLSLNQLTS 132

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L + D SSN+   LP  +G+  NL +   S N  T+LP+++     + KL
Sbjct: 133 LPKEIGQLQNLQELDLSSNRFTTLPKEIGQLQNLQELDLSGNQFTTLPKEIGQLQNLQKL 192

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+ T L    +     L EL  S N    +P+ I     +  L+L  N++ S+   
Sbjct: 193 DLSNNRFTTLPKE-VGQLQSLEELDLSGNQFTTLPKEIRRRQNIRWLNLAGNQLTSLSKE 251

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA-CQLRLSVLDLSN 284
           I    +L    +  N  + LP E+G+L  L TL+L  N+   +  E   Q  ++ L L +
Sbjct: 252 IGQFQNLQGLDLSKNRFTTLPKEIGQLQNLETLNLSGNRFTTFPKEVRRQENITWLYLDD 311

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           N L  LP EIG+   L  L L GN L +L
Sbjct: 312 NQLKALPKEIGQFQHLEGLFLKGNQLTSL 340



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 159/334 (47%), Gaps = 15/334 (4%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
            +  +L+ +P AIG L  L+ L+++ + +  +P EIG    L     + N+L  LP  +G
Sbjct: 56  FNREQLTSIPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSLPQEIG 115

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           +  NL     S N +TSLP+++     + +LD+  N+ T L    I     L EL  S N
Sbjct: 116 QLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTLPKE-IGQLQNLQELDLSGN 174

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
               +P+ IG L  L +LDL  NR  ++P  +    SL E  +  N  + LP E+ +   
Sbjct: 175 QFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGNQFTTLPKEIRRRQN 234

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +  L+L  NQL     E  Q + L  LDLS N  + LP EIG++  L  L L+GN   T 
Sbjct: 235 IRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEIGQLQNLETLNLSGNRFTTF 294

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              +        L YL       +D++     ++ I     L    + L L+G  L+++P
Sbjct: 295 PKEVRRQENITWL-YL-------DDNQLKALPKE-IGQFQHL----EGLFLKGNQLTSLP 341

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            EI +   + +LDLS+N     P E+    +L++
Sbjct: 342 KEIEQLQNLQQLDLSKNRFTTFPKEIEQLQNLKL 375



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 132/286 (46%), Gaps = 23/286 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L  L +S N+L+ LP  IG+L  L+ LD+S N    
Sbjct: 96  NLQGLFLNINRLSSLPQEIGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTT 155

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L + D S NQ   LP  +G+  NL     SNN  T+LP+++     + +L
Sbjct: 156 LPKEIGQLQNLQELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEEL 215

Query: 166 DVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGMPETI 203
           D+ GN+ T L   +                      I  +  L  L  SKN    +P+ I
Sbjct: 216 DLSGNQFTTLPKEIRRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEI 275

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L  L  L+L  NR  + P  +    ++   Y+ +N L ALP E+G+   L  L L  N
Sbjct: 276 GQLQNLETLNLSGNRFTTFPKEVRRQENITWLYLDDNQLKALPKEIGQFQHLEGLFLKGN 335

Query: 264 QLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           QL     E      L  LDLS N  +  P EI ++  L+ L L  N
Sbjct: 336 QLTSLPKEIEQLQNLQQLDLSKNRFTTFPKEIEQLQNLKLLRLYSN 381



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 130/292 (44%), Gaps = 15/292 (5%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           F  +  QL  +P+++GR  NL   + + + +TSLP+++     +  L +  N+L+ L   
Sbjct: 54  FLFNREQLTSIPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSLPQE 113

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I     L  L  S N L  +P+ IG L  L  LDL  NR  ++P  I    +L E  + 
Sbjct: 114 -IGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTLPKEIGQLQNLQELDLS 172

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
            N  + LP E+G+L  L  LDL +N+      E  QL+ L  LDLS N  + LP EI + 
Sbjct: 173 GNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGNQFTTLPKEIRRR 232

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             +R L L GN L +L   +        L   ++R          TT    I     L  
Sbjct: 233 QNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRF---------TTLPKEIGQLQNLET 283

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
               L+L G   +  P E+     IT L L  N ++ LP E+     L+  F
Sbjct: 284 ----LNLSGNRFTTFPKEVRRQENITWLYLDDNQLKALPKEIGQFQHLEGLF 331



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 24/221 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L+ N    L +++  L  L  L++S+N+ + LP  +G+L  L+ LD+S N    
Sbjct: 165 NLQELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGNQFTT 224

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EI     +   + + NQL  L   +G+  NL     S N  T+LP+++     +  L
Sbjct: 225 LPKEIRRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEIGQLQNLETL 284

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH---------- 215
           ++ GN+ T      +     +T L    N L  +P+ IG    L  L L           
Sbjct: 285 NLSGNRFTTFPKE-VRRQENITWLYLDDNQLKALPKEIGQFQHLEGLFLKGNQLTSLPKE 343

Query: 216 -------------QNRILSIPSSISGCCSLAEFYMGNNALS 243
                        +NR  + P  I    +L    + +N+ S
Sbjct: 344 IEQLQNLQQLDLSKNRFTTFPKEIEQLQNLKLLRLYSNSFS 384



 Score = 45.1 bits (105), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 56/129 (43%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L+ N    L +++  L  L  LN+S N+ +  P  +     +  L +  N +  
Sbjct: 257 NLQGLDLSKNRFTTLPKEIGQLQNLETLNLSGNRFTTFPKEVRRQENITWLYLDDNQLKA 316

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       NQL  LP  + +  NL     S N  T+ P+++     +  L
Sbjct: 317 LPKEIGQFQHLEGLFLKGNQLTSLPKEIEQLQNLQQLDLSKNRFTTFPKEIEQLQNLKLL 376

Query: 166 DVEGNKLTV 174
            +  N  ++
Sbjct: 377 RLYSNSFSL 385


>gi|351706877|gb|EHB09796.1| Leucine-rich repeat-containing protein 1, partial [Heterocephalus
           glaber]
          Length = 472

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N +  LP +IG L  LK L +  N + +
Sbjct: 100 NLASLELRENLLTYLPDSLTQLQRLEELDLGNNDIYNLPKSIGALLHLKDLWLDGNQLSE 159

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 160 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 219

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L   L      LTEL+ ++N L  +P+++G L +L  L+  +N+++S+P  
Sbjct: 220 KVDQNRLTHLPEAL-GDCENLTELVLTENRLLTLPKSVGKLKKLSNLNADRNKLVSLPKE 278

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + NN L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 279 IGGCCSLTVFCVRNNRLTWIPAEVSQATELHVLDVAGNRLSHLPLSLTTLKLKALWLSDN 338

Query: 286 S 286
            
Sbjct: 339 Q 339



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 162/331 (48%), Gaps = 17/331 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +
Sbjct: 55  LQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYL 114

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +     L + D  +N +  LP S+G  L+L D     N ++ LP+++ +   +  LD
Sbjct: 115 PDSLTQLQRLEELDLGNNDIYNLPKSIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLD 174

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N+L  L    I+  T LT+L+ S+NLL  +P+ IG L +L  L + QNR+  +P ++
Sbjct: 175 VSENRLERLPEE-ISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTHLPEAL 233

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSN 284
             C +L E  +  N L  LP  +GKL KL  L+   N+L     E   C   L+V  + N
Sbjct: 234 GDCENLTELVLTENRLLTLPKSVGKLKKLSNLNADRNKLVSLPKEIGGC-CSLTVFCVRN 292

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ +P E+ + T L  L + GN L  L  SL      AL       L +N+       
Sbjct: 293 NRLTWIPAEVSQATELHVLDVAGNRLSHLPLSLTTLKLKALW------LSDNQ------- 339

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            + L+T  T    T+ E  L  + L  +PSE
Sbjct: 340 SQPLLTFQTDTDRTTGEKILTCVLLPQLPSE 370



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 174/362 (48%), Gaps = 36/362 (9%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           ++++ V L+KL L+ N I++L  ++ N   L  L+VS N + E+P +I     L+  D S
Sbjct: 2   QFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFS 61

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N + ++P+       L     +   L+ LP ++G   NL+  +   N +T LP+ L   
Sbjct: 62  GNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQL 121

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++ +LD+  N +  L  + I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+
Sbjct: 122 QRLEELDLGNNDIYNLPKS-IGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRL 180

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV 279
             +P  ISG  SL +  +  N L  +P  +GKL K                      LS+
Sbjct: 181 ERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKK----------------------LSI 218

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L +  N L+ LP  +G    L +L+LT N L TL  S+        LK L S L  + + 
Sbjct: 219 LKVDQNRLTHLPEALGDCENLTELVLTENRLLTLPKSV------GKLKKL-SNLNADRNK 271

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
             S  KE  I     L+V      +    L+ IP+E+ +A E+  LD++ N +  LP  L
Sbjct: 272 LVSLPKE--IGGCCSLTV----FCVRNNRLTWIPAEVSQATELHVLDVAGNRLSHLPLSL 325

Query: 400 SS 401
           ++
Sbjct: 326 TT 327



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 153/341 (44%), Gaps = 50/341 (14%)

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDFKASN 146
           +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C  L ++DF  S 
Sbjct: 5   QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADF--SG 62

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LPE   +   ++ L V    L  L  N I +   L  L   +NLL  +P+++  L
Sbjct: 63  NPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENLLTYLPDSLTQL 121

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
            RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L           
Sbjct: 122 QRLEELDLGNNDIYNLPKSIGALLHLKDLWLDGNQLSELPQEIGNLKNL----------- 170

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
             C          LD+S N L  LP EI  +T+L  L+++ N L T+   +      ++L
Sbjct: 171 -LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 219

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           K  ++RL      EA    E+L            EL L    L  +P  + +  +++ L+
Sbjct: 220 KVDQNRL--THLPEALGDCENLT-----------ELVLTENRLLTLPKSVGKLKKLSNLN 266

Query: 387 LSRNSIQELPPELSSCASLQVKFSDLVTNKESCISGCYLYW 427
             RN +  LP E+  C SL V           C+    L W
Sbjct: 267 ADRNKLVSLPKEIGGCCSLTV----------FCVRNNRLTW 297


>gi|436836854|ref|YP_007322070.1| Protein LAP2 Erbb2-interacting protein [Fibrella aestuarina BUZ 2]
 gi|384068267|emb|CCH01477.1| Protein LAP2 Erbb2-interacting protein [Fibrella aestuarina BUZ 2]
          Length = 801

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 180/403 (44%), Gaps = 55/403 (13%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L    + +L   L  L  LT L  + N L+ LP ++G+L  L+ L+VS N +  +
Sbjct: 390 LRQLSLDRCELTELPATLGQLGQLTYLTATQNHLTRLPESLGQLRQLRDLNVSMNDLTDL 449

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +    AL +    +NQL   P  L +  +L     S+N +T++P+ + +  ++  L 
Sbjct: 450 PGSLRQLPALERLAAFTNQLTRFPVELAQVRHL---YLSDNQLTNVPDAVGELRRLRSLT 506

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN LT L    I     L  L    N L  +P+ IG LSRL  L+L  NR+  +P SI
Sbjct: 507 LAGNPLTSLPET-IGQLDSLEMLTLGDNQLTALPQRIGQLSRLSWLELGNNRLRELPESI 565

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH-------------SNQLKEYCVEAC 273
               SL    +GNN L  LPA +G   +L T  L                QL++  +E+ 
Sbjct: 566 GSLTSLTAVVIGNNPLEILPASVGGWQRLRTASLQLPYLRRLPDQIGNWQQLEDLTIESD 625

Query: 274 QL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP----------LRT 312
           QL            L+VL LS N L GLP  +GK+T LR+L+++             L  
Sbjct: 626 QLVLLPDALTDCRSLTVLTLSGNKLIGLPERMGKLTRLRQLVVSARSDSTTGSGLGRLTN 685

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS---KELSLEGMNL 369
           L + LVN P    L   + +  +  D             A RLS      + LS     +
Sbjct: 686 LPADLVNCPALTDLTVQQQQAFDGGD-------------ALRLSAALPRLQTLSFINCGI 732

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL-QVKFSD 411
           + +   +W    +  L+L +N + +LP  L    +L Q+  +D
Sbjct: 733 TDLSGIVWSKLSLVNLNLMQNRLSQLPNSLLDMPNLTQINLAD 775



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 172/392 (43%), Gaps = 62/392 (15%)

Query: 57  IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL 116
           +  L E L NL  L  L++  N L  LPA +G L  L+ L +    + ++P  +G    L
Sbjct: 354 LTALPESLDNLTRLEELHLDRNPLQTLPALVGRLTRLRQLSLDRCELTELPATLGQLGQL 413

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
                + N L  LP SLG+   L D   S N +T LP  L     + +L    N+LT   
Sbjct: 414 TYLTATQNHLTRLPESLGQLRQLRDLNVSMNDLTDLPGSLRQLPALERLAAFTNQLTRFP 473

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
             L      +  L  S N L  +P+ +G L RL  L L  N + S+P +I    SL    
Sbjct: 474 VEL----AQVRHLYLSDNQLTNVPDAVGELRRLRSLTLAGNPLTSLPETIGQLDSLEMLT 529

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 296
           +G+N L+ALP  +G+LS                      RLS L+L NN L  LP  IG 
Sbjct: 530 LGDNQLTALPQRIGQLS----------------------RLSWLELGNNRLRELPESIGS 567

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNG----PTPAL-LKYLRSRLPEN-------ED----SE 340
           +T+L  +++  NPL  L +S V G     T +L L YLR RLP+        ED    S+
Sbjct: 568 LTSLTAVVIGNNPLEILPAS-VGGWQRLRTASLQLPYLR-RLPDQIGNWQQLEDLTIESD 625

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS--------- 391
                 D +T    L+V    L+L G  L  +P  + +   + +L +S  S         
Sbjct: 626 QLVLLPDALTDCRSLTV----LTLSGNKLIGLPERMGKLTRLRQLVVSARSDSTTGSGLG 681

Query: 392 -IQELPPELSSCASLQVKFSDLVTNKESCISG 422
            +  LP +L +C +L    +DL   ++    G
Sbjct: 682 RLTNLPADLVNCPAL----TDLTVQQQQAFDG 709



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 146/312 (46%), Gaps = 34/312 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LS+  L +VP       D  GE  +      L+ L LA N +  L E +  L  L +L
Sbjct: 482 LYLSDNQLTNVP-------DAVGELRR------LRSLTLAGNPLTSLPETIGQLDSLEML 528

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L+ LP  IG+L  L  L++  N + ++P+ IGS T+L      +N L+ LP+S+
Sbjct: 529 TLGDNQLTALPQRIGQLSRLSWLELGNNRLRELPESIGSLTSLTAVVIGNNPLEILPASV 588

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G    L         +  LP+ + +  ++  L +E ++L +L + L    + LT L  S 
Sbjct: 589 GGWQRLRTASLQLPYLRRLPDQIGNWQQLEDLTIESDQLVLLPDALTDCRS-LTVLTLSG 647

Query: 194 NLLNGMPETIGSLSRLIRLDLHQ----------NRILSIPSSISGCCSLAEF-------Y 236
           N L G+PE +G L+RL +L +             R+ ++P+ +  C +L +        +
Sbjct: 648 NKLIGLPERMGKLTRLRQLVVSARSDSTTGSGLGRLTNLPADLVNCPALTDLTVQQQQAF 707

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 296
            G +AL  L A L +L  L  ++     L    +   +L L  L+L  N LS LP  +  
Sbjct: 708 DGGDALR-LSAALPRLQTLSFINCGITDLS--GIVWSKLSLVNLNLMQNRLSQLPNSLLD 764

Query: 297 MTTLRKLLLTGN 308
           M  L ++ L  N
Sbjct: 765 MPNLTQINLADN 776



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 176/408 (43%), Gaps = 45/408 (11%)

Query: 41  WWEAVDLQKLILAHN-NIEKLKEDLRNLPLLTVLNVS-HNKLSELPAAIGELHMLKSLDV 98
           W     +++L L+ N N+ +    L  LP L  L +   +  +ELP A     + +  ++
Sbjct: 166 WDRLTSVRELTLSTNLNVRQALSQLSRLPALESLTLYLWDTSAELPTAADWALLPQLREL 225

Query: 99  SFNSIMKIPD---EIGSATALVKFDCSSNQLKE---LPSSLGRCLNLS-DFKASNNCITS 151
           + N     PD    +G  T L K   SS QL +   L +SL R   L  D+    + +  
Sbjct: 226 TVNGFDTRPDWLIGLGRLTNLRKLTFSSGQLADMNALFTSLQRLETLDLDYVGPADRLPR 285

Query: 152 LPEDLADCSKMSKLDVE---GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           L   LA    +  L +      +  V  ++ +A  T L  L      L  +P ++ +  +
Sbjct: 286 L--RLAALPALQSLHLSRYGKEEKAVDLDSTLAGVTTLRHLTLDGIRLAALPRSLLANPQ 343

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L+ L L    + ++P S+     L E ++  N L  LPA +G+L++L  L L   +L E 
Sbjct: 344 LVTLSLVDCELTALPESLDNLTRLEELHLDRNPLQTLPALVGRLTRLRQLSLDRCELTEL 403

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT----- 322
                QL +L+ L  + N L+ LP  +G++  LR L ++ N L  L  SL   P      
Sbjct: 404 PATLGQLGQLTYLTATQNHLTRLPESLGQLRQLRDLNVSMNDLTDLPGSLRQLPALERLA 463

Query: 323 ---------PALLKYLR------SRLPENEDSEASTTKEDLITMA----TRLSVTSKEL- 362
                    P  L  +R      ++L    D+     +   +T+A    T L  T  +L 
Sbjct: 464 AFTNQLTRFPVELAQVRHLYLSDNQLTNVPDAVGELRRLRSLTLAGNPLTSLPETIGQLD 523

Query: 363 SLEGM-----NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           SLE +      L+A+P  I +   ++ L+L  N ++ELP  + S  SL
Sbjct: 524 SLEMLTLGDNQLTALPQRIGQLSRLSWLELGNNRLRELPESIGSLTSL 571


>gi|418698103|ref|ZP_13259082.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762807|gb|EKR28966.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 595

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 168/364 (46%), Gaps = 11/364 (3%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+  P E+G+L  L  L    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+  P EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 287 NNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAENGV 340

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLS-AIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
            +   + +A    +   ELSLE  + S + P  I +   +  L+L       LP E+S  
Sbjct: 341 YRN--LNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRL 398

Query: 403 ASLQ 406
            +L+
Sbjct: 399 KNLK 402



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 164/390 (42%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+S N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    +              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLTAEIGQLQ------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 563



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 133/294 (45%), Gaps = 43/294 (14%)

Query: 17  SNRSLRDVP-NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIE----KLKEDLRNLPLLT 71
           SN  LR+V  N VY+N + A E     E + + +L L + +      K+    RNL    
Sbjct: 328 SNLDLREVAENGVYRNLNLAQE-----EPLKVFELSLEYKDFSQSFPKVILKFRNL---R 379

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            LN+     S LP  I  L  LK L +  N +  IP EIG    L   +  +N+L+ LP 
Sbjct: 380 GLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPK 439

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 440 EIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 482

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++ + I    +L E  + +N  + LP E+GK
Sbjct: 483 -------FPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGK 535

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           L KL TLDL +NQL     E  QL+ L  L L NN LS     + +   +RKLL
Sbjct: 536 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS-----LKEQERIRKLL 584



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 185/462 (40%), Gaps = 89/462 (19%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL---------------SNN 178
           G+  NL     S N +T+LP+++     +  LD++ N+ T L               S+N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDN 219

Query: 179 LIASWTM-------LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
            +A+  +       L EL    N L   P+ IG L  L  L   +NR+ ++P  +    +
Sbjct: 220 QLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQN 279

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL-------------------------- 265
           L    + NN L+  P E+G+L  L  L+L  N L                          
Sbjct: 280 LQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENG 339

Query: 266 --------KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                   +E  ++  +L L   D S       P  I K   LR L L      TL   +
Sbjct: 340 VYRNLNLAQEEPLKVFELSLEYKDFS----QSFPKVILKFRNLRGLNLYDCGFSTLPKEI 395

Query: 318 VNGPTPALLKYLRSRLP--ENEDSEASTTK--EDLITMATRLSVTSKE---------LSL 364
                   LKYL   L   +N  SE    K  E L   A  L    KE         LSL
Sbjct: 396 SRLKN---LKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSL 452

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
               L   P+EI +  ++ KLDLS N     P E+    +LQ
Sbjct: 453 HQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 98/228 (42%), Gaps = 23/228 (10%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
            P  I +   L+ L++       +P EI     L       N LK +PS +G+  NL   
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 427

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
               N +  LP+++     + KL +  N L +     I     L +L  S N     P+ 
Sbjct: 428 NLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKE 486

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L+L +N++ ++ + I    +L E  + +N  + LP E+GKL KL TLDL  
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLR- 545

Query: 263 NQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
                                NN L+ LP EIG++  L+ L L  N L
Sbjct: 546 ---------------------NNQLTTLPTEIGQLQNLQWLYLQNNQL 572


>gi|418707313|ref|ZP_13268139.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772360|gb|EKR47548.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 378

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 147/310 (47%), Gaps = 30/310 (9%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
           +Y++  +A     +   +D++ LIL+   ++ L E +  L  L +L++S N+L  LP  I
Sbjct: 35  IYRDLTKA-----FQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEI 89

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
            +L  L+ L +++N +   P EI    +L K   S+NQL  LP  +G+  NL +    NN
Sbjct: 90  RQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNN 149

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + ++ +++     + KL ++ N+LT      I     L  L  S N L   P+ IG L 
Sbjct: 150 QLKTISKEIEQLKNLQKLYLDNNQLTAFPKE-IGKLQNLKSLFLSNNQLTTFPKEIGKLQ 208

Query: 208 RLIRLDLHQNRILS-----------------------IPSSISGCCSLAEFYMGNNALSA 244
            L  L LH N++ +                       +P  I    +L   Y+ +N    
Sbjct: 209 NLQELYLHDNQLTTFTKEIGQLKNLRILLLNNNQFKILPEEIGHLKNLQALYLHDNQFKI 268

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+G+L  L  L L  NQ K   VE  QL+ L +L L  N L+ LP EIGK+  L+ L
Sbjct: 269 LPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKML 328

Query: 304 LLTGNPLRTL 313
            L  N L T+
Sbjct: 329 NLDANQLTTI 338



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 133/266 (50%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L +N +    +++  L  L  L +S+N+L+ LP  IG+L  L+ L++  N +  
Sbjct: 94  NLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNNQLKT 153

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I  EI     L K    +NQL   P  +G+  NL     SNN +T+ P+++     + +L
Sbjct: 154 ISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQEL 213

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT  +   I     L  L+ + N    +PE IG L  L  L LH N+   +P  
Sbjct: 214 YLHDNQLTTFTKE-IGQLKNLRILLLNNNQFKILPEEIGHLKNLQALYLHDNQFKILPKE 272

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++  N    +P E G+L  L  L L +NQL     E  +L+ L +L+L  
Sbjct: 273 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDA 332

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ +P EIG++  L+ L L  N L
Sbjct: 333 NQLTTIPKEIGQLQNLQTLYLRNNQL 358



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 129/316 (40%), Gaps = 38/316 (12%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ L +S   +  +P++IG    L   D S NQL  LP  + +  NL +   + N +T+ 
Sbjct: 49  VRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTF 108

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + KL +  N+LT+L    I     L EL    N L  + + I  L  L +L
Sbjct: 109 PKEIEQLKSLHKLYLSNNQLTILPVE-IGQLQNLRELNLWNNQLKTISKEIEQLKNLQKL 167

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  N++ + P  I    +L   ++ NN L+  P E+GKL  L  L LH NQL  +  E 
Sbjct: 168 YLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQLTTFTKEI 227

Query: 273 CQLRLSVLDLSNN-SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+   + L NN     LP EIG +  L+ L L  N  + L                  
Sbjct: 228 GQLKNLRILLLNNNQFKILPEEIGHLKNLQALYLHDNQFKILPKE--------------- 272

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                            I     L V    L L       IP E  +   +  L L  N 
Sbjct: 273 -----------------IGQLQNLQV----LFLSYNQFKTIPVEFGQLKNLKMLSLDANQ 311

Query: 392 IQELPPELSSCASLQV 407
           +  LP E+    +L++
Sbjct: 312 LTALPKEIGKLKNLKM 327



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 122/285 (42%), Gaps = 40/285 (14%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           ++L  +    L++     S   + +LPE +     +  LD+  N+L +L           
Sbjct: 37  RDLTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIIL----------- 85

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                        P+ I  L  L  L L+ N++ + P  I    SL + Y+ NN L+ LP
Sbjct: 86  -------------PKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILP 132

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            E+G+L  L  L+L +NQLK    E  QL+ L  L L NN L+  P EIGK+  L+ L L
Sbjct: 133 VEIGQLQNLRELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFL 192

Query: 306 TGNPLRTLRSSLVNGPTPALLK-YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           + N L T    +  G    L + YL        D++ +T  +++  +     +       
Sbjct: 193 SNNQLTTFPKEI--GKLQNLQELYLH-------DNQLTTFTKEIGQLKNLRILLLNNNQF 243

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           +      +P EI     +  L L  N  + LP E+    +LQV F
Sbjct: 244 K-----ILPEEIGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLF 283



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 14/231 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL N  L+ +  E+              +  +LQKL L +N +    +++  L  L  
Sbjct: 143 ELNLWNNQLKTISKEI-------------EQLKNLQKLYLDNNQLTAFPKEIGKLQNLKS 189

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S+N+L+  P  IG+L  L+ L +  N +     EIG    L     ++NQ K LP  
Sbjct: 190 LFLSNNQLTTFPKEIGKLQNLQELYLHDNQLTTFTKEIGQLKNLRILLLNNNQFKILPEE 249

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL      +N    LP+++     +  L +  N+   +          L  L   
Sbjct: 250 IGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPVEF-GQLKNLKMLSLD 308

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
            N L  +P+ IG L  L  L+L  N++ +IP  I    +L   Y+ NN LS
Sbjct: 309 ANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLS 359



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 57/115 (49%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E++ +L  L  L +  N+   LP  IG+L  L+ L +S+N    IP E G    L   
Sbjct: 246 LPEEIGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKML 305

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
              +NQL  LP  +G+  NL       N +T++P+++     +  L +  N+L++
Sbjct: 306 SLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLSI 360


>gi|374990821|ref|YP_004966316.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
 gi|297161473|gb|ADI11185.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 370

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 126/223 (56%), Gaps = 1/223 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L  L L  N + +L E L  L  L  L+V  N++S +P+++G+L  L  LD+S N ++
Sbjct: 124 TELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSLGDLAALSELDLSGNRLV 183

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           +IP  +G  TAL + +   N+L ELP+SLG   NLS     +N +T LP +L+  + +  
Sbjct: 184 EIPRTLGKLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTRLPAELSGLTALRW 243

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L+++ N+LT L       +T LT +    N L  +PET+G L+ L  L L  NR+  +P+
Sbjct: 244 LNLDRNELTELP-PWAGGFTALTGINLGFNRLTALPETLGGLTALTSLSLRGNRLTELPA 302

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           S++G  +L    +G+N L+ LPA +G L  L +L L  N+   
Sbjct: 303 SMAGLTALTSLDLGDNELTDLPAWVGDLPALTSLRLDGNRFSH 345



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 141/251 (56%), Gaps = 2/251 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT L++S    +E+P  +G+L  L  L +S N + ++P+ +G+ +AL +F  + N+L ++
Sbjct: 57  LTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELPESLGNLSALTEFVLNGNRLAQI 116

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  + +   L+D    +N +T LPE L    K++ LDV  N+++ + ++L      L+EL
Sbjct: 117 PIWVRQLTELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSL-GDLAALSEL 175

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L  +P T+G L+ L  L+L  NR+  +P+S+    +L+   +G+N L+ LPAEL
Sbjct: 176 DLSGNRLVEIPRTLGKLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTRLPAEL 235

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
             L+ L  L+L  N+L E    A     L+ ++L  N L+ LP  +G +T L  L L GN
Sbjct: 236 SGLTALRWLNLDRNELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTALTSLSLRGN 295

Query: 309 PLRTLRSSLVN 319
            L  L +S+  
Sbjct: 296 RLTELPASMAG 306



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 140/290 (48%), Gaps = 25/290 (8%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           EA  L +L L+     ++ + L +L  LT L++S N+L ELP ++G L  L    ++ N 
Sbjct: 53  EATALTRLDLSDGTFTEVPDFLGDLTGLTHLSLSDNRLEELPESLGNLSALTEFVLNGNR 112

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           + +IP  +   T L       N+L ELP  LG    L+     +N I+++P  L D + +
Sbjct: 113 LAQIPIWVRQLTELTDLALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSLGDLAAL 172

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           S+LD+ GN+L  +   L    T LTEL    N L  +P ++G L+ L  L L  NR+  +
Sbjct: 173 SELDLSGNRLVEIPRTL-GKLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTRL 231

Query: 223 PSSISGC-----------------------CSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P+ +SG                         +L    +G N L+ALP  LG L+ L +L 
Sbjct: 232 PAELSGLTALRWLNLDRNELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTALTSLS 291

Query: 260 LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           L  N+L E       L  L+ LDL +N L+ LP  +G +  L  L L GN
Sbjct: 292 LRGNRLTELPASMAGLTALTSLDLGDNELTDLPAWVGDLPALTSLRLDGN 341



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 68/131 (51%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L  L+L  N + +L  +L  L  L  LN+  N+L+ELP   G    L  +++ FN 
Sbjct: 214 ELANLSHLLLGSNRLTRLPAELSGLTALRWLNLDRNELTELPPWAGGFTALTGINLGFNR 273

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P+ +G  TAL       N+L ELP+S+     L+     +N +T LP  + D   +
Sbjct: 274 LTALPETLGGLTALTSLSLRGNRLTELPASMAGLTALTSLDLGDNELTDLPAWVGDLPAL 333

Query: 163 SKLDVEGNKLT 173
           + L ++GN+ +
Sbjct: 334 TSLRLDGNRFS 344



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 56/116 (48%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N + +L         LT +N+  N+L+ LP  +G L  L SL +  N + ++
Sbjct: 241 LRWLNLDRNELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTALTSLSLRGNRLTEL 300

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           P  +   TAL   D   N+L +LP+ +G    L+  +   N  +  P  LAD  ++
Sbjct: 301 PASMAGLTALTSLDLGDNELTDLPAWVGDLPALTSLRLDGNRFSHAPRWLADHERL 356


>gi|198415792|ref|XP_002126526.1| PREDICTED: similar to Leucine-rich repeat-containing protein 40
           [Ciona intestinalis]
          Length = 815

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 192/388 (49%), Gaps = 34/388 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLN+S+  L+ +P  ++K             A  L+   +++N I+KL +++     +T 
Sbjct: 118 SLNVSDNRLKALPKTIHK-------------ASGLETCDVSNNKIKKLPKNIGQ-SNMTS 163

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEI---GSATALVKFDCSSNQLKEL 129
           L+VS N +  LP +I  L   +SLDVS N I  +P  +    S   + + + S N+L +L
Sbjct: 164 LDVSQNSIKILPKSIYRLP--RSLDVSGNQIEVLPPIVITKKSKGNISQINLSDNKLSKL 221

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  + +   L+    S N + SLP  +     +  LD   N + V   ++ +    LT L
Sbjct: 222 PEDIDKLQRLTHINVSGNHLQSLPTAIGSLKYLHHLDASSNNIKVFPQSVYSLGFSLTSL 281

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N L  +P+ IGSL RL    L  N++ ++P+ ++G  SL + ++ NN L+ L   +
Sbjct: 282 NLTNNSLESIPDGIGSLKRLRVFMLSFNKLQTLPNDMNGLVSLQQLHVSNNNLTNLSPLI 341

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G L  L TLD  +N++     E   LR L +L+L+NN L+ LPP IG +  L++L L  N
Sbjct: 342 G-LLHLETLDASNNKITSLPTEMHTLRWLFILNLANNQLTSLPPSIGHIKALKQLYLRNN 400

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L +L S+L       LL+ +     +  D+E +   +DL     R   T ++L L    
Sbjct: 401 RLESLPSTLGEQ---QLLQVV-----DASDNELTNLPDDL-----RKWRTLEQLILARNQ 447

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELP 396
           LS IP  I   G + K D+S N+    P
Sbjct: 448 LSQIPKSIKYLGMLDKFDVSDNNFVTSP 475



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 121/246 (49%), Gaps = 26/246 (10%)

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           ++T L++S  +L E P +I     L+ L ++ NSI  IP  IG    L   D S+NQ+  
Sbjct: 518 IVTSLDLSRVELEEFPLSICNCRNLRELKLAGNSIKSIPGNIGRLRLLEILDVSNNQVAR 577

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           +P  +G   +L +   SNNC+ +  ++L     +  L+  GN+LT L             
Sbjct: 578 IPEQIGILTHLQELHVSNNCLENFAQNLTKLRSLQILNFAGNQLTQL------------- 624

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS-ISGCCSLAEFYMGNNALSALPA 247
                      PE  G L++L  +DL  N++L +P+  I    SL    +  N +  +P 
Sbjct: 625 -----------PENFGELNKLTSMDLSDNQLLELPNDRIDVLASLMTLNISYNRVKNIPT 673

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           +L  L ++  ++L  N LK   ++  +++ L+ LDL++N +  +P  I K+  L++L LT
Sbjct: 674 DLPYLYRMQIINLSRNDLKLLPIDIWRMKSLTSLDLTDNLIESIPESIAKLPALKELNLT 733

Query: 307 GNPLRT 312
            N ++ 
Sbjct: 734 DNKIKV 739



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 167/367 (45%), Gaps = 24/367 (6%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           LA+N +  L   + ++  L  L + +N+L  LP+ +GE  +L+ +D S N +  +PD++ 
Sbjct: 374 LANNQLTSLPPSIGHIKALKQLYLRNNRLESLPSTLGEQQLLQVVDASDNELTNLPDDLR 433

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN- 170
               L +   + NQL ++P S+     L  F  S+N   + P   A    + +L + GN 
Sbjct: 434 KWRTLEQLILARNQLSQIPKSIKYLGMLDKFDVSDNNFVTSPLPDAASKVLRELRLAGNP 493

Query: 171 -KLTVLSNN-----LIASWTMLTELIASKNL----LNGMPETIGSLSRLIRLDLHQNRIL 220
            +L  L  +     +   +  L  ++ S +L    L   P +I +   L  L L  N I 
Sbjct: 494 WRLPPLGGDDNRSLITRIYKELNGIVTSLDLSRVELEEFPLSICNCRNLRELKLAGNSIK 553

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
           SIP +I     L    + NN ++ +P ++G L+ L  L + +N L+ +     +LR L +
Sbjct: 554 SIPGNIGRLRLLEILDVSNNQVARIPEQIGILTHLQELHVSNNCLENFAQNLTKLRSLQI 613

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L+ + N L+ LP   G++  L  + L+ N L  L +  ++     L   +   +  N   
Sbjct: 614 LNFAGNQLTQLPENFGELNKLTSMDLSDNQLLELPNDRID----VLASLMTLNISYNRVK 669

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
              T    L  M          ++L   +L  +P +IW    +T LDL+ N I+ +P  +
Sbjct: 670 NIPTDLPYLYRMQI--------INLSRNDLKLLPIDIWRMKSLTSLDLTDNLIESIPESI 721

Query: 400 SSCASLQ 406
           +   +L+
Sbjct: 722 AKLPALK 728



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 103/196 (52%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L ++ N +  +P  IG L +L+ LDVS N + +IP++IG  T L +   S+N L+    +
Sbjct: 545 LKLAGNSIKSIPGNIGRLRLLEILDVSNNQVARIPEQIGILTHLQELHVSNNCLENFAQN 604

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           L +  +L     + N +T LPE+  + +K++ +D+  N+L  L N+ I     L  L  S
Sbjct: 605 LTKLRSLQILNFAGNQLTQLPENFGELNKLTSMDLSDNQLLELPNDRIDVLASLMTLNIS 664

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N +  +P  +  L R+  ++L +N +  +P  I    SL    + +N + ++P  + KL
Sbjct: 665 YNRVKNIPTDLPYLYRMQIINLSRNDLKLLPIDIWRMKSLTSLDLTDNLIESIPESIAKL 724

Query: 253 SKLGTLDLHSNQLKEY 268
             L  L+L  N++K +
Sbjct: 725 PALKELNLTDNKIKVW 740



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 106/203 (52%), Gaps = 4/203 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L LA N+I+ +  ++  L LL +L+VS+N+++ +P  IG L  L+ L VS N +  
Sbjct: 541 NLRELKLAGNSIKSIPGNIGRLRLLEILDVSNNQVARIPEQIGILTHLQELHVSNNCLEN 600

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC-SKMSK 164
               +    +L   + + NQL +LP + G    L+    S+N +  LP D  D  + +  
Sbjct: 601 FAQNLTKLRSLQILNFAGNQLTQLPENFGELNKLTSMDLSDNQLLELPNDRIDVLASLMT 660

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIA-SKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           L++  N++  +  +L   + M  ++I  S+N L  +P  I  +  L  LDL  N I SIP
Sbjct: 661 LNISYNRVKNIPTDLPYLYRM--QIINLSRNDLKLLPIDIWRMKSLTSLDLTDNLIESIP 718

Query: 224 SSISGCCSLAEFYMGNNALSALP 246
            SI+   +L E  + +N +   P
Sbjct: 719 ESIAKLPALKELNLTDNKIKVWP 741



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 141/308 (45%), Gaps = 55/308 (17%)

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
           +E+   T++      +N++K++P S+    +L +    NN I +LP  +A   K+S L+V
Sbjct: 64  EEVAMMTSV--LHAQNNKIKKIPRSISALQSLYEVDMRNNVIGALPASVAKLKKLSSLNV 121

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
             N+L  L                        P+TI   S L   D+  N+I  +P +I 
Sbjct: 122 SDNRLKAL------------------------PKTIHKASGLETCDVSNNKIKKLPKNI- 156

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE----YCVEACQLRLSVLDLS 283
           G  ++    +  N++  LP  + +L +  +LD+  NQ++        +  +  +S ++LS
Sbjct: 157 GQSNMTSLDVSQNSIKILPKSIYRLPR--SLDVSGNQIEVLPPIVITKKSKGNISQINLS 214

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           +N LS LP +I K+  L  + ++GN L++L +++        LKYL      + D+ ++ 
Sbjct: 215 DNKLSKLPEDIDKLQRLTHINVSGNHLQSLPTAI------GSLKYL-----HHLDASSNN 263

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLS-----AIPSEIWEAGEITKLDLSRNSIQELPPE 398
            K          SV S   SL  +NL+     +IP  I     +    LS N +Q LP +
Sbjct: 264 IK------VFPQSVYSLGFSLTSLNLTNNSLESIPDGIGSLKRLRVFMLSFNKLQTLPND 317

Query: 399 LSSCASLQ 406
           ++   SLQ
Sbjct: 318 MNGLVSLQ 325



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 114/237 (48%), Gaps = 16/237 (6%)

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           M + L A  N +  +P +I +L  L  +D+  N I ++P+S++    L+   + +N L A
Sbjct: 69  MTSVLHAQNNKIKKIPRSISALQSLYEVDMRNNVIGALPASVAKLKKLSSLNVSDNRLKA 128

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           LP  + K S L T D+ +N++K+      Q  ++ LD+S NS+  LP  I ++   R L 
Sbjct: 129 LPKTIHKASGLETCDVSNNKIKKLPKNIGQSNMTSLDVSQNSIKILPKSIYRLP--RSLD 186

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLR------SRLPENED-----SEASTTKEDLITMAT 353
           ++GN +  L   ++   +   +  +       S+LPE+ D     +  + +   L ++ T
Sbjct: 187 VSGNQIEVLPPIVITKKSKGNISQINLSDNKLSKLPEDIDKLQRLTHINVSGNHLQSLPT 246

Query: 354 RLSVTS--KELSLEGMNLSAIPSEIWEAG-EITKLDLSRNSIQELPPELSSCASLQV 407
            +        L     N+   P  ++  G  +T L+L+ NS++ +P  + S   L+V
Sbjct: 247 AIGSLKYLHHLDASSNNIKVFPQSVYSLGFSLTSLNLTNNSLESIPDGIGSLKRLRV 303



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 12/122 (9%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           S++LS+  L ++PN            D+      L  L +++N ++ +  DL  L  + +
Sbjct: 636 SMDLSDNQLLELPN------------DRIDVLASLMTLNISYNRVKNIPTDLPYLYRMQI 683

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           +N+S N L  LP  I  +  L SLD++ N I  IP+ I    AL + + + N++K  P  
Sbjct: 684 INLSRNDLKLLPIDIWRMKSLTSLDLTDNLIESIPESIAKLPALKELNLTDNKIKVWPKC 743

Query: 133 LG 134
           + 
Sbjct: 744 MA 745


>gi|24213573|ref|NP_711054.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386073187|ref|YP_005987504.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24194363|gb|AAN48072.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353456976|gb|AER01521.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 423

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 188/395 (47%), Gaps = 51/395 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS + L+ +PN++              +  +LQKL L  N    L +++  L  L  
Sbjct: 45  NLDLSFQGLKTLPNKI-------------GQLKNLQKLDLGGNEPTILSKEIWQLKDLQK 91

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +  +N+L  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +    +N + SLP ++     +  LD+  N+LT +S  ++   T L  L   
Sbjct: 152 IGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLET-LENLDLR 210

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N    LP E+ +L
Sbjct: 211 SNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQILPVEILEL 270

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  L++L L+GN + 
Sbjct: 271 KNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKIT 330

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L   ++       LK L                                LSL    L+A
Sbjct: 331 ILPKEILQ------LKNLEW------------------------------LSLSNNKLNA 354

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +P EI +  ++ +L+L  N +  LP E+    +LQ
Sbjct: 355 LPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQ 389



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 92/213 (43%), Gaps = 37/213 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                   P  ++ L+S                            K L L    L+ +  
Sbjct: 172 --------PTEIEQLKSL---------------------------KNLDLNHNELTTVSK 196

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           E+     +  LDL  N ++ +P E+    SL+V
Sbjct: 197 EVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 65/120 (54%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N + +  +++  L  L  L++ HN+++ LP  + +L  L+ L +S N I  +P EI   
Sbjct: 280 YNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L     S+N+L  LP  +G+   L   +  NN +T+LP+++     + +L+++ N ++
Sbjct: 340 KNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|431838264|gb|ELK00196.1| Leucine-rich repeat-containing protein 1 [Pteropus alecto]
          Length = 489

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 117 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSE 176

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+G+   L+  D S N+L+ LP  +    +L+D   S N +  +PE +    K+S L
Sbjct: 177 LPQEVGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPEGIGKLKKLSIL 236

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 237 KVDQNRLTQLPET-VGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLMSLPKE 295

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 296 IGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDN 355

Query: 286 S 286
            
Sbjct: 356 Q 356



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 179/371 (48%), Gaps = 36/371 (9%)

Query: 31  NFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL 90
           N  E  +  ++++ V L+KL L+ N I++L  ++ N   L  L+VS N + E+P +I   
Sbjct: 10  NMCERKQLRQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFC 69

Query: 91  HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCIT 150
             L+  D S N + ++P+       L     +   L+ LP ++G   NL+  +   N +T
Sbjct: 70  KALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLT 129

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
            LP+ L    ++ +LD+  N++  L  + I +   L +L    N L+ +P+ +G+L  L+
Sbjct: 130 YLPDSLTQLRRLEELDLGNNEIYSLPES-IGALLHLKDLWLDGNQLSELPQEVGNLKNLL 188

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            LD+ +NR+  +P  ISG  SL +  +  N L  +P  +GKL K                
Sbjct: 189 CLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPEGIGKLKK---------------- 232

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
                 LS+L +  N L+ LP  +G   +L +L+LT N L TL  S+        LK L 
Sbjct: 233 ------LSILKVDQNRLTQLPETVGDCESLTELVLTENRLLTLPKSI------GKLKKL- 279

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           S L  + +   S  KE  I     L+V      +    L+ IP+E+ +A E+  LD++ N
Sbjct: 280 SNLNADRNKLMSLPKE--IGGCCSLTV----FCVRDNRLTRIPAEVSQATELHVLDVAGN 333

Query: 391 SIQELPPELSS 401
            +  LP  L++
Sbjct: 334 RLLHLPLSLTA 344



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/321 (30%), Positives = 149/321 (46%), Gaps = 40/321 (12%)

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDFKASN 146
           +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C  L ++DF  S 
Sbjct: 22  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADF--SG 79

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LPE   +   ++ L V    L  L  N I +   L  L   +NLL  +P+++  L
Sbjct: 80  NPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENLLTYLPDSLTQL 138

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
            RL  LDL  N I S+P SI     L + ++  N LS LP E+G L  L           
Sbjct: 139 RRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEVGNLKNL----------- 187

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
             C          LD+S N L  LP EI  +T+L  L+++ N L  +   +      ++L
Sbjct: 188 -LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPEGIGKLKKLSIL 236

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           K  ++RL     ++   T  D  ++         EL L    L  +P  I +  +++ L+
Sbjct: 237 KVDQNRL-----TQLPETVGDCESLT--------ELVLTENRLLTLPKSIGKLKKLSNLN 283

Query: 387 LSRNSIQELPPELSSCASLQV 407
             RN +  LP E+  C SL V
Sbjct: 284 ADRNKLMSLPKEIGGCCSLTV 304



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 100/232 (43%), Gaps = 41/232 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +L  S N +  +P  I +  +L+ LD+ +N I  IP SIS C +L       N L+ L
Sbjct: 26  LRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRL 85

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P    +L  L  L ++   L+        L  L+ L+L  N L+ LP  + ++  L +L 
Sbjct: 86  PESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELD 145

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N + +L  S+      ALL                                 K+L L
Sbjct: 146 LGNNEIYSLPESI-----GALLHL-------------------------------KDLWL 169

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P E+     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 170 DGNQLSELPQEVGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 217


>gi|47228901|emb|CAG09416.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 452

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/273 (32%), Positives = 142/273 (52%), Gaps = 8/273 (2%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L  L L  N +  L E L  L  L  L++ +N+L  LP +IG L  LK L +  N + 
Sbjct: 151 ANLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPESIGHLVGLKDLWLDGNQLT 210

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           +IP E+GS   L+  D S N+++ LP  LG  L+L+D   S N I +LPE +    K+S 
Sbjct: 211 EIPAEMGSMKNLLCLDVSENKIERLPEELGGLLSLADLLVSQNLIDALPESIGKLRKLSI 270

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L  + N+LT L  + I +   LTEL+ ++N +  +P +IG L +L   +  +N++ S+P 
Sbjct: 271 LKADQNRLTYLPES-IGNCESLTELVLTENKIQSLPRSIGKLKQLFNFNCDRNQLTSLPK 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA-----C--QLRL 277
            I GC SL  F +  N L+ +P+EL + ++L  LD+  N+    C  A     C  +  L
Sbjct: 330 EIGGCQSLNVFCVRENRLTRIPSELSQATELHVLDVSGNRKVHCCPHANMRPLCPNRFHL 389

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L    +  +  P ++    T + L+  G P+
Sbjct: 390 PFLLFFRSFQAAKPADLSDHATPQGLVAVGEPV 422



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 176/389 (45%), Gaps = 49/389 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D I +  R+   L L    LRD+P +             ++  V L+KL L+ N I+++ 
Sbjct: 29  DEIYRYERSLEELLLDANQLRDLPKQ-------------FFHLVKLRKLGLSDNEIQRIP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++P+       L     
Sbjct: 76  PEIANFMELVELDVSRNDIMEIPESISFCSALQVADFSGNPLTRLPESFPKLRNLTCLSI 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP ++G   NL   +   N +T LPE L+   ++ +LD+  N+L  L  + I 
Sbjct: 136 NDISLQVLPENIGNLANLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPES-IG 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L +L    N L  +P  +GS+  L+ LD+ +N+I  +P  + G  SLA+  +  N 
Sbjct: 195 HLVGLKDLWLDGNQLTEIPAEMGSMKNLLCLDVSENKIERLPEELGGLLSLADLLVSQNL 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           + ALP  +GKL KL                      S+L    N L+ LP  IG   +L 
Sbjct: 255 IDALPESIGKLRKL----------------------SILKADQNRLTYLPESIGNCESLT 292

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N +++L  S+  G    L  +       N D    T+    I     L+V    
Sbjct: 293 ELVLTENKIQSLPRSI--GKLKQLFNF-------NCDRNQLTSLPKEIGGCQSLNV---- 339

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             +    L+ IPSE+ +A E+  LD+S N
Sbjct: 340 FCVRENRLTRIPSELSQATELHVLDVSGN 368



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 155/335 (46%), Gaps = 46/335 (13%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L +LP     L  L+ L +S N I +IP EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRDLPKQFFHLVKLRKLGLSDNEIQRIPPEIANFMELVELDVSRNDIMEIPESISFCS 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE       ++ L +    L VL  N I +   L  L   +NL
Sbjct: 106 ALQVADF--SGNPLTRLPESFPKLRNLTCLSINDISLQVLPEN-IGNLANLVSLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +PE++  L RL  LDL  N + S+P SI     L + ++  N L+ +PAE+G +  L
Sbjct: 163 LTFLPESLSMLHRLEELDLGNNELYSLPESIGHLVGLKDLWLDGNQLTEIPAEMGSMKNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N +  LP E+G + +L  LL++ N +  L  
Sbjct: 223 ------------LC----------LDVSENKIERLPEELGGLLSLADLLVSQNLIDALPE 260

Query: 316 SLVNGPTPALLKYLRSR---LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           S+      ++LK  ++R   LPE+  +  S T                EL L    + ++
Sbjct: 261 SIGKLRKLSILKADQNRLTYLPESIGNCESLT----------------ELVLTENKIQSL 304

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           P  I +  ++   +  RN +  LP E+  C SL V
Sbjct: 305 PRSIGKLKQLFNFNCDRNQLTSLPKEIGGCQSLNV 339



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 96/223 (43%), Gaps = 18/223 (8%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +P+    L +L +L L  N I  IP  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRDLPKQFFHLVKLRKLGLSDNEIQRIPPEIANFMELVELDVSRNDIMEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +   S L   D   N L        +LR L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCSALQVADFSGNPLTRLPESFPKLRNLTCLSINDISLQVLPENIGNLANLVSLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKEL 362
           L  N L  L  SL      ++L  L          E      +L ++   +   V  K+L
Sbjct: 158 LRENLLTFLPESL------SMLHRL---------EELDLGNNELYSLPESIGHLVGLKDL 202

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            L+G  L+ IP+E+     +  LD+S N I+ LP EL    SL
Sbjct: 203 WLDGNQLTEIPAEMGSMKNLLCLDVSENKIERLPEELGGLLSL 245



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 131/322 (40%), Gaps = 64/322 (19%)

Query: 93  LKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++ +D    S++ +PDEI     +L +    +NQL++LP      + L     S+N I  
Sbjct: 14  VEVIDKRHCSLLFVPDEIYRYERSLEELLLDANQLRDLPKQFFHLVKLRKLGLSDNEIQR 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           +P ++A+  ++ +LDV                        S+N +  +PE+I   S L  
Sbjct: 74  IPPEIANFMELVELDV------------------------SRNDIMEIPESISFCSALQV 109

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D   N +  +P S     +L    + + +L  LP  +G L+ L +L+L  N L  +  E
Sbjct: 110 ADFSGNPLTRLPESFPKLRNLTCLSINDISLQVLPENIGNLANLVSLELRENLLT-FLPE 168

Query: 272 ACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           +  +  RL  LDL NN L  LP  IG +  L+ L L GN L  +         PA     
Sbjct: 169 SLSMLHRLEELDLGNNELYSLPESIGHLVGLKDLWLDGNQLTEI---------PA----- 214

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
                            ++ +M   L +   E  +E      +P E+     +  L +S+
Sbjct: 215 -----------------EMGSMKNLLCLDVSENKIE-----RLPEELGGLLSLADLLVSQ 252

Query: 390 NSIQELPPELSSCASLQVKFSD 411
           N I  LP  +     L +  +D
Sbjct: 253 NLIDALPESIGKLRKLSILKAD 274


>gi|254415005|ref|ZP_05028768.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
 gi|196178152|gb|EDX73153.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1090

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 146/270 (54%), Gaps = 11/270 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L +A N +++L  ++  L  L  LN+  NK+ ELP  IG+L  L+SLD+ +N I ++
Sbjct: 78  LEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLTSLQSLDLRYNKIQEL 137

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLG-----RCLNLSDFKASNNCITSLPEDLADCSK 161
           P EIG  T+L   + S N ++ELP  +G     + L+LS F    N I  LP  +   + 
Sbjct: 138 PPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFF----NNIQELPPQIFQLTS 193

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L +  NK+  L   ++   T L  L  S N +  +P  I  L+ L  L L  N+I  
Sbjct: 194 LQSLHLSFNKIQELPAEIL-QLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQE 252

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P+ I    SL    + +N +  LP E+ +L+ L +L+L  N ++E   E  QL  L  L
Sbjct: 253 LPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQELPPEILQLTSLQSL 312

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           +L +N++  LPPEI ++  L+KL L  NPL
Sbjct: 313 NLRSNNIQELPPEIRQLPNLKKLDLRSNPL 342



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 157/325 (48%), Gaps = 42/325 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           NKLS LP  IG+LH L+ L ++ N + ++P EI   T+L   +   N+++ELP  +G+  
Sbjct: 63  NKLSALPREIGQLHQLEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLT 122

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL-IASKNLL 196
           +L       N I  LP ++   + +  L++ GN +  L    I   T L  L ++  N +
Sbjct: 123 SLQSLDLRYNKIQELPPEIGQLTSLQSLNLSGNNIQELPPE-IGQLTALQSLDLSFFNNI 181

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P  I  L+ L  L L  N+I  +P+ I    SL   ++  N +  LPAE+ +L+ L 
Sbjct: 182 QELPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQ 241

Query: 257 TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
           +L L  N+++E   E  QL  L  L+L +N++  LPPEI ++T+L+ L L GN ++ L  
Sbjct: 242 SLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQELPP 301

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS-KELSLEGMNLSAIPS 374
            +                                     L +TS + L+L   N+  +P 
Sbjct: 302 EI-------------------------------------LQLTSLQSLNLRSNNIQELPP 324

Query: 375 EIWEAGEITKLDLSRNSIQELPPEL 399
           EI +   + KLDL  N +  +PPE+
Sbjct: 325 EIRQLPNLKKLDLRSNPL-PIPPEI 348



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 140/269 (52%), Gaps = 3/269 (1%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N +  L  ++  L  L  L ++ N+L ELP  I +L  L+SL++  N I ++P EIG  T
Sbjct: 63  NKLSALPREIGQLHQLEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLT 122

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE-GNKLT 173
           +L   D   N+++ELP  +G+  +L     S N I  LP ++   + +  LD+   N + 
Sbjct: 123 SLQSLDLRYNKIQELPPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQ 182

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L    I   T L  L  S N +  +P  I  L+ L  L L  N+I  +P+ I    SL 
Sbjct: 183 ELPPQ-IFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQ 241

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             ++  N +  LPAE+ +L+ L +L+L+SN ++E   E  QL  L  L+L  N++  LPP
Sbjct: 242 SLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQELPP 301

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           EI ++T+L+ L L  N ++ L   +   P
Sbjct: 302 EILQLTSLQSLNLRSNNIQELPPEIRQLP 330



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 134/250 (53%), Gaps = 4/250 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N I++L  ++  L  L  L++ +NK+ ELP  IG+L  L+SL++S N+I ++
Sbjct: 101 LQSLNLGCNKIQELPPEIGQLTSLQSLDLRYNKIQELPPEIGQLTSLQSLNLSGNNIQEL 160

Query: 107 PDEIGSATALVKFDCS-SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P EIG  TAL   D S  N ++ELP  + +  +L     S N I  LP ++   + +  L
Sbjct: 161 PPEIGQLTALQSLDLSFFNNIQELPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSL 220

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  NK+  L   ++   T L  L  S N +  +P  I  L+ L  L+L+ N I  +P  
Sbjct: 221 HLSFNKIQELPAEIL-QLTSLQSLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPE 279

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           I    SL    +G N +  LP E+ +L+ L +L+L SN ++E   E  QL  L  LDL +
Sbjct: 280 ILQLTSLQSLNLGGNNIQELPPEILQLTSLQSLNLRSNNIQELPPEIRQLPNLKKLDLRS 339

Query: 285 NSLSGLPPEI 294
           N L  +PPEI
Sbjct: 340 NPLP-IPPEI 348



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 156/340 (45%), Gaps = 52/340 (15%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++S N L+ LP  IG+L  LK L +         D+ G     +      N+L  LP
Sbjct: 19  TELDLSGNDLTVLPPDIGKLTHLKKLILGKYQY----DDEGDIAGFI-----GNKLSALP 69

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
             +G+   L + + + N +  LP ++   + +  L++  NK+  L               
Sbjct: 70  REIGQLHQLEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQEL--------------- 114

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
                    P  IG L+ L  LDL  N+I  +P  I    SL    +  N +  LP E+G
Sbjct: 115 ---------PPEIGQLTSLQSLDLRYNKIQELPPEIGQLTSLQSLNLSGNNIQELPPEIG 165

Query: 251 KLSKLGTLDL-HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           +L+ L +LDL   N ++E   +  QL  L  L LS N +  LP EI ++T+L+ L L+ N
Sbjct: 166 QLTALQSLDLSFFNNIQELPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFN 225

Query: 309 PLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTS-KELSLEG 366
            ++ L + ++       L  L+S  L  N+  E           A  L +TS + L+L  
Sbjct: 226 KIQELPAEILQ------LTSLQSLHLSFNKIQELP---------AEILQLTSLQSLNLYS 270

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            N+  +P EI +   +  L+L  N+IQELPPE+    SLQ
Sbjct: 271 NNIQELPPEILQLTSLQSLNLGGNNIQELPPEILQLTSLQ 310



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 16/223 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAH-NNIEKLKEDLRNLPLLT 71
           SLNLS  +++++P E+              +   LQ L L+  NNI++L   +  L  L 
Sbjct: 149 SLNLSGNNIQELPPEI-------------GQLTALQSLDLSFFNNIQELPPQIFQLTSLQ 195

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L++S NK+ ELPA I +L  L+SL +SFN I ++P EI   T+L     S N+++ELP+
Sbjct: 196 SLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPA 255

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  +L      +N I  LP ++   + +  L++ GN +  L   ++   T L  L  
Sbjct: 256 EILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQELPPEIL-QLTSLQSLNL 314

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
             N +  +P  I  L  L +LDL  N  L IP  I G     E
Sbjct: 315 RSNNIQELPPEIRQLPNLKKLDLRSNP-LPIPPEILGSKEWYE 356



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 17/153 (11%)

Query: 263 NQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           N+L +   +A +   + LDLS N L+ LPP+IGK+T L+KL+L              G  
Sbjct: 4   NELLQLIEQAAREEWTELDLSGNDLTVLPPDIGKLTHLKKLILGKYQYDD------EGDI 57

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL----SLEGMNL-----SAIP 373
              +    S LP  E  +    +E  I +  +L     E+    SL+ +NL       +P
Sbjct: 58  AGFIGNKLSALPR-EIGQLHQLEELQIAL-NQLQELPPEILQLTSLQSLNLGCNKIQELP 115

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            EI +   +  LDL  N IQELPPE+    SLQ
Sbjct: 116 PEIGQLTSLQSLDLRYNKIQELPPEIGQLTSLQ 148


>gi|294956203|ref|XP_002788852.1| leucine-rich repeat-containing protein 32 precursor, putative
           [Perkinsus marinus ATCC 50983]
 gi|239904464|gb|EER20648.1| leucine-rich repeat-containing protein 32 precursor, putative
           [Perkinsus marinus ATCC 50983]
          Length = 582

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 196/399 (49%), Gaps = 13/399 (3%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           ++  LK A  SGSLNL++  L  VP ++ K      +G  WW+   ++K+ ++ N I ++
Sbjct: 19  IEAALKRAFASGSLNLASAGLTTVPQQLEKLDTFTLDGVSWWQCNSIEKVDISGNEIREI 78

Query: 61  KEDL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
              L  ++P     N S N++  LP A+  L  LKSL +  N +   P    S ++LV+ 
Sbjct: 79  PTGLFEHIPDCRSFNASDNRIESLPIALLGLAKLKSLLLIRNKLTIFPTS-ESPSSLVEV 137

Query: 120 DCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
             S N L ELP      L N+      +N + +L E L   +++  L    N+L  +   
Sbjct: 138 RLSHNSLCELPRGFADVLPNVQALSIDHNHLVNLDEPLP--TQLRVLLASSNELVSI-RG 194

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
           +      L EL  SKN L  +P+ +   S+L  +DL  N+++  P       +LA  Y  
Sbjct: 195 VGDGLDFLEELDLSKNSLTAIPD-LRCCSQLGNIDLSHNKLVHWPRLGEKVHTLAFSY-- 251

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
            N+L + P        L TL L +N++K        L +L  LD+SNN +S +P E+G++
Sbjct: 252 -NSLESPPEAALLPPALVTLLLDNNKVKGVPGGVFALDKLKTLDMSNNDISRVPSELGRL 310

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
            +L K+ L GNP+R +  +++   +  LLK LR RL  +E S     +E L+T     + 
Sbjct: 311 PSLTKVALDGNPIRNVPMAVLRQGSAGLLKLLRERLGPDEVS-VDDVQEALMTEVRNATH 369

Query: 358 TSKELSLEGMNLS-AIPSEIWEAGEITKLDLSRNSIQEL 395
             K L L    L   IP E+ +A  +  LDLSRN + E+
Sbjct: 370 GGKRLDLSNRRLGPGIPEEVLQAEGLLVLDLSRNMVAEI 408



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 158/370 (42%), Gaps = 80/370 (21%)

Query: 14  LNLSNRSLRDVPN----EVYKNFDEAGEGDKWWEAV--DLQKLILAHNNIEKLKEDLRNL 67
           L+LS  SL  +P+        N D +      W  +   +  L  ++N++E   E     
Sbjct: 205 LDLSKNSLTAIPDLRCCSQLGNIDLSHNKLVHWPRLGEKVHTLAFSYNSLESPPEAALLP 264

Query: 68  PLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK 127
           P L  L + +NK+  +P  +  L  LK+LD+S N I ++P E+G   +L K     N ++
Sbjct: 265 PALVTLLLDNNKVKGVPGGVFALDKLKTLDMSNNDISRVPSELGRLPSLTKVALDGNPIR 324

Query: 128 ELPSSL----------------------------------------GRCLNLSDFKASNN 147
            +P ++                                        G+ L+LS+ +    
Sbjct: 325 NVPMAVLRQGSAGLLKLLRERLGPDEVSVDDVQEALMTEVRNATHGGKRLDLSNRRLG-- 382

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLT--------------VLSNNLIAS-----WTMLTE 188
               +PE++     +  LD+  N +               V+S+N++ +     +  L E
Sbjct: 383 --PGIPEEVLQAEGLLVLDLSRNMVAEIEVLKSLDTLLRLVMSHNVLKTIDALNYPALQE 440

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNR-ILSIPSSI-SGCCSLAEFYMGNNALSA-- 244
           L  S N L  +P  I SL +L++ D   NR ++S+P S+  GC  L E   GN  L +  
Sbjct: 441 LDISNNKLTKLPGEI-SLPQLVQFDASCNRELISLPKSLLMGCAKLRELRAGNCCLHSWD 499

Query: 245 -LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD---LSNNSLSGLPPEIGKMTTL 300
            LP    +   L  LDL +N+  +   +    RL  L    L+NN+++ LPP +G+ T L
Sbjct: 500 FLPNP--EHPHLEVLDLSNNRFTDIPTDLVPTRLPGLQTLLLANNAIATLPPSLGRATAL 557

Query: 301 RKLLLTGNPL 310
           R L L GNP+
Sbjct: 558 RSLTLEGNPI 567



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 110/273 (40%), Gaps = 68/273 (24%)

Query: 1   MDRILKAARTSGSLNLSNRSL-RDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEK 59
           M  +  A      L+LSNR L   +P EV +      EG        L  L L+ N + +
Sbjct: 361 MTEVRNATHGGKRLDLSNRRLGPGIPEEVLQ-----AEG--------LLVLDLSRNMVAE 407

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           + E L++L  L  L +SHN L  + A       L+ LD+S N + K+P EI S   LV+F
Sbjct: 408 I-EVLKSLDTLLRLVMSHNVLKTIDAL--NYPALQELDISNNKLTKLPGEI-SLPQLVQF 463

Query: 120 DCSSN-QLKELPSSL-GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           D S N +L  LP SL   C  L + +A N C+                            
Sbjct: 464 DASCNRELISLPKSLLMGCAKLRELRAGNCCL---------------------------- 495

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI--SGCCSLAEF 235
               SW  L             PE       L  LDL  NR   IP+ +  +    L   
Sbjct: 496 ---HSWDFLPN-----------PEH----PHLEVLDLSNNRFTDIPTDLVPTRLPGLQTL 537

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
            + NNA++ LP  LG+ + L +L L  N +  Y
Sbjct: 538 LLANNAIATLPPSLGRATALRSLTLEGNPISCY 570


>gi|417766182|ref|ZP_12414136.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400351636|gb|EJP03855.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 423

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 187/395 (47%), Gaps = 51/395 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS + L+ +PN++              +  +LQKL L  N    L +++  L  L  
Sbjct: 45  NLDLSFQGLKTLPNKI-------------GQLKNLQKLDLGGNEPTILSKEIWQLKDLQK 91

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +  +N+L  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +    +N + SLP ++     +  LD+  N+LT +S  ++   T L  L   
Sbjct: 152 IGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLET-LENLDLR 210

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N     P E+ +L
Sbjct: 211 SNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILEL 270

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  L++L L+GN + 
Sbjct: 271 KNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKIT 330

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L   ++       LK L                                LSL    L+A
Sbjct: 331 ILPKEILQ------LKNLEW------------------------------LSLSNNKLNA 354

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +P EI +  ++ +L+L  N +  LP E+    +LQ
Sbjct: 355 LPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQ 389



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 92/213 (43%), Gaps = 37/213 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                   P  ++ L+S                            K L L    L+ +  
Sbjct: 172 --------PTEIEQLKSL---------------------------KNLDLNHNELTTVSK 196

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           E+     +  LDL  N ++ +P E+    SL+V
Sbjct: 197 EVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 65/120 (54%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N + +  +++  L  L  L++ HN+++ LP  + +L  L+ L +S N I  +P EI   
Sbjct: 280 YNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L     S+N+L  LP  +G+   L   +  NN +T+LP+++     + +L+++ N ++
Sbjct: 340 KNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|456824532|gb|EMF72958.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 187/395 (47%), Gaps = 51/395 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS + L+ +PN++              +  +LQKL L  N    L +++  L  L  
Sbjct: 45  NLDLSFQGLKTLPNKI-------------GQLKNLQKLDLGGNEPTILSKEIWQLKDLQK 91

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +  +N+L  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +    +N + SLP ++     +  LD+  N+LT +S  ++   T L  L   
Sbjct: 152 IGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLET-LENLDLR 210

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N     P E+ +L
Sbjct: 211 SNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILEL 270

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  L++L L+GN + 
Sbjct: 271 KNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKIT 330

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L   ++       LK L                                LSL    L+A
Sbjct: 331 ILPKEILQ------LKNLEW------------------------------LSLSNNKLNA 354

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +P EI +  ++ +L+L  N +  LP E+    +LQ
Sbjct: 355 LPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQ 389



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 92/213 (43%), Gaps = 37/213 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                   P  ++ L+S                            K L L    L+ +  
Sbjct: 172 --------PTEIEQLKSL---------------------------KNLDLNHNELTTVSK 196

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           E+     +  LDL  N ++ +P E+    SL+V
Sbjct: 197 EVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 65/120 (54%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N + +  +++  L  L  L++ HN+++ LP  + +L  L+ L +S N I  +P EI   
Sbjct: 280 YNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L     S+N+L  LP  +G+   L   +  NN +T+LP+++     + +L+++ N ++
Sbjct: 340 KNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|321460374|gb|EFX71417.1| hypothetical protein DAPPUDRAFT_327214 [Daphnia pulex]
          Length = 1847

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 178/393 (45%), Gaps = 53/393 (13%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           + +R+   L L    +RD+P    KNF         +    L+KL L+ N I+++ +D++
Sbjct: 31  RYSRSLEELLLDANHIRDLP----KNF---------FRLAKLRKLSLSDNEIQRIPQDIQ 77

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
           N   L  L+VS N +S++P  I  +  L+  D S N I ++P        L     +   
Sbjct: 78  NFENLVELDVSRNDISDIPETIKHVKALQVADFSSNPIPRLPAGFVQLKNLTVLGLNDMS 137

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
           L  LP   G   NL   +   N + +LPE ++  +K+ +LD+  N + +L  + I S   
Sbjct: 138 LSSLPLDFGSLSNLQSVELRENLLRTLPESMSQLTKLERLDLGDNDIEILPAH-IGSLPA 196

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           LTEL    N L  +P+ +  L+ L  LD+ +N + S+P  I G  SL + ++  N L +L
Sbjct: 197 LTELWLDHNQLGQLPKELCQLTNLACLDVSENHLDSMPEEIGGLISLTDLHLSQNFLESL 256

Query: 246 PAELGKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           P  +G LSKL  L +  N+L    Y +  C + L  L L+ N L+ LP  IG MT L  L
Sbjct: 257 PDGIGALSKLTILKVDQNRLTTLNYAIGKC-VALQELILTENFLTELPTSIGNMTKLTNL 315

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
            +  N L  L         P  + +L                           V    LS
Sbjct: 316 NVDRNRLHEL---------PVEVGHL---------------------------VCLNVLS 339

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           L    L  +P+E+ +  E+  LD+S N +Q LP
Sbjct: 340 LRENKLHFLPNELGDCSELHVLDVSGNRLQYLP 372



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 124/240 (51%), Gaps = 1/240 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ + L  N +  L E +  L  L  L++  N +  LPA IG L  L  L +  N + +
Sbjct: 150 NLQSVELRENLLRTLPESMSQLTKLERLDLGDNDIEILPAHIGSLPALTELWLDHNQLGQ 209

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+   T L   D S N L  +P  +G  ++L+D   S N + SLP+ +   SK++ L
Sbjct: 210 LPKELCQLTNLACLDVSENHLDSMPEEIGGLISLTDLHLSQNFLESLPDGIGALSKLTIL 269

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L N  I     L ELI ++N L  +P +IG++++L  L++ +NR+  +P  
Sbjct: 270 KVDQNRLTTL-NYAIGKCVALQELILTENFLTELPTSIGNMTKLTNLNVDRNRLHELPVE 328

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           +     L    +  N L  LP ELG  S+L  LD+  N+L+   +    L L  + LS N
Sbjct: 329 VGHLVCLNVLSLRENKLHFLPNELGDCSELHVLDVSGNRLQYLPLSLTGLNLKAIWLSEN 388



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 158/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG--R 135
           N + +LP     L  L+ L +S N I +IP +I +   LV+ D S N + ++P ++   +
Sbjct: 44  NHIRDLPKNFFRLAKLRKLSLSDNEIQRIPQDIQNFENLVELDVSRNDISDIPETIKHVK 103

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S+N I  LP             V+   LTVL  N ++              
Sbjct: 104 ALQVADF--SSNPIPRLPAGF----------VQLKNLTVLGLNDMS-------------- 137

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L+ +P   GSLS L  ++L +N + ++P S+S    L    +G+N +  LPA +G L  L
Sbjct: 138 LSSLPLDFGSLSNLQSVELRENLLRTLPESMSQLTKLERLDLGDNDIEILPAHIGSLPAL 197

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L  NQL +   E CQL  L+ LD+S N L  +P EIG + +L  L L+ N L +L 
Sbjct: 198 TELWLDHNQLGQLPKELCQLTNLACLDVSENHLDSMPEEIGGLISLTDLHLSQNFLESLP 257

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +       +LK  ++RL         TT    +  A    V  +EL L    L+ +P+
Sbjct: 258 DGIGALSKLTILKVDQNRL---------TT----LNYAIGKCVALQELILTENFLTELPT 304

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            I    ++T L++ RN + ELP E+     L V
Sbjct: 305 SIGNMTKLTNLNVDRNRLHELPVEVGHLVCLNV 337



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 9/146 (6%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           + L  L L+ N +E L + +  L  LT+L V  N+L+ L  AIG+   L+ L ++ N + 
Sbjct: 241 ISLTDLHLSQNFLESLPDGIGALSKLTILKVDQNRLTTLNYAIGKCVALQELILTENFLT 300

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGR--CLNLSDFKASNNCITSLPEDLADCSKM 162
           ++P  IG+ T L   +   N+L ELP  +G   CLN+   +   N +  LP +L DCS++
Sbjct: 301 ELPTSIGNMTKLTNLNVDRNRLHELPVEVGHLVCLNVLSLR--ENKLHFLPNELGDCSEL 358

Query: 163 SKLDVEGNKLTVL-----SNNLIASW 183
             LDV GN+L  L       NL A W
Sbjct: 359 HVLDVSGNRLQYLPLSLTGLNLKAIW 384


>gi|427725244|ref|YP_007072521.1| adenylate cyclase [Leptolyngbya sp. PCC 7376]
 gi|427356964|gb|AFY39687.1| Adenylate cyclase [Leptolyngbya sp. PCC 7376]
          Length = 287

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 135/262 (51%), Gaps = 2/262 (0%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++S   L+E+P ++ +L  L  L++  N I ++P+ I   T L     S N++ E+ 
Sbjct: 23  TDLDLSGLALTEVPESVAQLTNLTRLELDHNRITEVPESIAQLTNLTTLYLSENRITEIS 82

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
            ++    NL+     NN I  +PE +A  + ++ L++  N+LT +S   IA  T LT L 
Sbjct: 83  EAIAPLRNLTMLILKNNQIAKIPEAIAQLTNLTTLNLSHNQLTEISEA-IAQLTNLTTLS 141

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
            S N L  +PE I  L++L  L L +N +  IP  IS   +L E  +  N ++ +P  + 
Sbjct: 142 LSYNQLTEIPEAITKLTKLTSLRLGRNHLTEIPKEISQLANLTELLLYKNQITKVPKAIT 201

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L+ L  L L +NQ+ E      QL  L  LDLS N L+ +P  I ++T L  L L  NP
Sbjct: 202 QLTNLKMLSLFNNQITEIPEAIAQLTNLETLDLSYNQLTTIPESISQLTNLVILSLYQNP 261

Query: 310 LRTLRSSLVNGPTPALLKYLRS 331
           L  +  S  +G    L  Y R+
Sbjct: 262 LDPIVHSAYSGGIEELFAYFRN 283



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 15/265 (5%)

Query: 2   DRILKAARTSGS-LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           +RI  A +T  + L+LS  +L +VP  V              +  +L +L L HN I ++
Sbjct: 12  ERIETAQKTEATDLDLSGLALTEVPESV-------------AQLTNLTRLELDHNRITEV 58

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            E +  L  LT L +S N+++E+  AI  L  L  L +  N I KIP+ I   T L   +
Sbjct: 59  PESIAQLTNLTTLYLSENRITEISEAIAPLRNLTMLILKNNQIAKIPEAIAQLTNLTTLN 118

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S NQL E+  ++ +  NL+    S N +T +PE +   +K++ L +  N LT +    I
Sbjct: 119 LSHNQLTEISEAIAQLTNLTTLSLSYNQLTEIPEAITKLTKLTSLRLGRNHLTEIPKE-I 177

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           +    LTEL+  KN +  +P+ I  L+ L  L L  N+I  IP +I+   +L    +  N
Sbjct: 178 SQLANLTELLLYKNQITKVPKAITQLTNLKMLSLFNNQITEIPEAIAQLTNLETLDLSYN 237

Query: 241 ALSALPAELGKLSKLGTLDLHSNQL 265
            L+ +P  + +L+ L  L L+ N L
Sbjct: 238 QLTTIPESISQLTNLVILSLYQNPL 262



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 121/257 (47%), Gaps = 21/257 (8%)

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
           + A  ++ + LD+ G  LT +  + +A  T LT L    N +  +PE+I  L+ L  L L
Sbjct: 15  ETAQKTEATDLDLSGLALTEVPES-VAQLTNLTRLELDHNRITEVPESIAQLTNLTTLYL 73

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
            +NRI  I  +I+   +L    + NN ++ +P  + +L+ L TL+L  NQL E      Q
Sbjct: 74  SENRITEISEAIAPLRNLTMLILKNNQIAKIPEAIAQLTNLTTLNLSHNQLTEISEAIAQ 133

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---SSLVNGPTPALLKYLR 330
           L  L+ L LS N L+ +P  I K+T L  L L  N L  +    S L N     L K   
Sbjct: 134 LTNLTTLSLSYNQLTEIPEAITKLTKLTSLRLGRNHLTEIPKEISQLANLTELLLYKNQI 193

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +++P+             IT  T L    K LSL    ++ IP  I +   +  LDLS N
Sbjct: 194 TKVPKA------------ITQLTNL----KMLSLFNNQITEIPEAIAQLTNLETLDLSYN 237

Query: 391 SIQELPPELSSCASLQV 407
            +  +P  +S   +L +
Sbjct: 238 QLTTIPESISQLTNLVI 254


>gi|24216022|ref|NP_713503.1| hypothetical protein LA_3323 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075103|ref|YP_005989422.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197250|gb|AAN50521.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458894|gb|AER03439.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 311

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 136/285 (47%), Gaps = 30/285 (10%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           E Y +  +A +       +DL     + N  + L +++  L  L  LN++ N+L+ LP  
Sbjct: 36  ETYTDLTKALQNPLKVRTLDL-----SANRFKTLPKEIGKLKNLQELNLNKNQLTTLPQE 90

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG+L  LKSL++S+N I  IP EI     L      +NQL  LP  +G+  NL     S 
Sbjct: 91  IGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLST 150

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP+++     +  L +  N+LT+L                        P  IG L
Sbjct: 151 NRLTTLPQEIGHLQNLQDLYLVSNQLTIL------------------------PNEIGQL 186

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  L+L  NR+ ++   I    +L    + +N L+  P E+ +L  L  LDL SNQL 
Sbjct: 187 KNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLT 246

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
                  QL+ L  LDL +N L+ LP EIG++  L++L L  N L
Sbjct: 247 TLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 291



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/234 (34%), Positives = 122/234 (52%), Gaps = 2/234 (0%)

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
           ++L  A+     +++LD+S N    +P EIG    L + + + NQL  LP  +G+  NL 
Sbjct: 39  TDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTTLPQEIGQLKNLK 98

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               S N I ++P+++    K+  L ++ N+LT L    I     L  L  S N L  +P
Sbjct: 99  SLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQE-IGQLQNLQSLDLSTNRLTTLP 157

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L  L  L L  N++  +P+ I    +L    + NN L+ L  E+ +L  L +LDL
Sbjct: 158 QEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDL 217

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            SNQL  +  E  QL+ L VLDL +N L+ LP  IG++  L+ L L  N L TL
Sbjct: 218 RSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTL 271



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 130/277 (46%), Gaps = 38/277 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS    + +P E+ K               +LQ+L L  N +  L +++  L  L  
Sbjct: 53  TLDLSANRFKTLPKEIGK-------------LKNLQELNLNKNQLTTLPQEIGQLKNLKS 99

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+S+N++  +P  I +L  L+SL +  N +  +P EIG    L   D S+N+L  LP  
Sbjct: 100 LNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE 159

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G   NL D    +N +T LP ++     +  L++  N+LT LS                
Sbjct: 160 IGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLS---------------- 203

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                   + I  L  L  LDL  N++ + P  I    +L    +G+N L+ LP  +G+L
Sbjct: 204 --------KEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQL 255

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
             L TLDL SNQL     E  QL+ L  L L+NN LS
Sbjct: 256 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLS 292



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 16/218 (7%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N    +P+ IG L  L  L+L++N++ ++P  I    +L    +  N +  +P E+ K
Sbjct: 57  SANRFKTLPKEIGKLKNLQELNLNKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEK 116

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL +L L +NQL     E  QL+ L  LDLS N L+ LP EIG +  L+ L L  N L
Sbjct: 117 LQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQL 176

Query: 311 RTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
             L + +        LK L++  L  N  +  S   E L  +        K L L    L
Sbjct: 177 TILPNEI------GQLKNLQTLNLRNNRLTTLSKEIEQLQNL--------KSLDLRSNQL 222

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +  P EI +   +  LDL  N +  LP  +    +LQ 
Sbjct: 223 TTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQT 260



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 57/106 (53%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +N +  L +++  L  L  L++  N+L+  P  I +L  L+ LD+  N +  
Sbjct: 188 NLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTT 247

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P+ IG    L   D  SNQL  LP  +G+  NL +   +NN ++S
Sbjct: 248 LPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 293



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 17/143 (11%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RL 333
           L++  LDLS N    LP EIGK+  L++L L  N L TL   +        LK L+S  L
Sbjct: 49  LKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTTLPQEI------GQLKNLKSLNL 102

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
             N+        E L  + +        L L+   L+ +P EI +   +  LDLS N + 
Sbjct: 103 SYNQIKTIPKEIEKLQKLQS--------LGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLT 154

Query: 394 ELPPELSSCASLQVKFSDLVTNK 416
            LP E+    +LQ  +  LV+N+
Sbjct: 155 TLPQEIGHLQNLQDLY--LVSNQ 175


>gi|417760636|ref|ZP_12408653.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417773199|ref|ZP_12421083.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|417784393|ref|ZP_12432099.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|418673942|ref|ZP_13235253.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943556|gb|EKN89156.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409952210|gb|EKO06723.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|410577040|gb|EKQ40038.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579220|gb|EKQ47070.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 423

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 191/407 (46%), Gaps = 51/407 (12%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           +++ L+      +L+LS + L+ +PN++              +  +LQKL L  N    L
Sbjct: 33  LEKALQNPADVRNLDLSFQGLKTLPNKI-------------GQLKNLQKLDLGGNEPTIL 79

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +++  L  L  LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +
Sbjct: 80  SKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLN 139

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
             +N+L  LP  +G+  NL +    +N + SLP ++     +  LD+  N+ T +S  ++
Sbjct: 140 LDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVM 199

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
              T L  L    N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N
Sbjct: 200 LLET-LENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGEN 258

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
                P E+ +L  L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  
Sbjct: 259 RFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPD 318

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L++L L+GN +  L   ++       LK L                              
Sbjct: 319 LQELHLSGNKITILPKEILQ------LKNLEW---------------------------- 344

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             LSL    L+A+P EI +  ++ +L+L  N +  LP E+    +LQ
Sbjct: 345 --LSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQ 389



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 37/213 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                   P  ++ L+S                            K L L     + +  
Sbjct: 172 --------PTEIEQLKSL---------------------------KNLDLNNNEFTTVSK 196

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           E+     +  LDL  N ++ +P E+    SL+V
Sbjct: 197 EVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 65/120 (54%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N + +  +++  L  L  L++ HN+++ LP  + +L  L+ L +S N I  +P EI   
Sbjct: 280 YNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L     S+N+L  LP  +G+   L   +  NN +T+LP+++     + +L+++ N ++
Sbjct: 340 KNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|257061785|ref|YP_003139673.1| small GTP-binding protein [Cyanothece sp. PCC 8802]
 gi|256591951|gb|ACV02838.1| small GTP-binding protein [Cyanothece sp. PCC 8802]
          Length = 937

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 142/273 (52%), Gaps = 2/273 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N ++ L  ++  L  L  L ++ N L ELP  IG L  L  L ++ N +  +
Sbjct: 44  LKFLDLRNNKLKTLPPEIGKLQSLNALFLTTNYLEELPPEIGNLSTLHRLSLTENKLSHL 103

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E G+   L +   ++NQL  LP+  GR +NL     SNN +T LPE+  +  K+S LD
Sbjct: 104 PQEFGNLIGLTELYLANNQLNSLPTEFGRLINLERLSLSNNQLTLLPEEFGNLKKLSWLD 163

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ NKL  L N  I     L++L  S N L  +P  I  +  LI L+   N++ S+P  +
Sbjct: 164 LKSNKLESL-NPEIRDLKQLSKLNISYNQLTNLPPQISEVESLIELNASYNQLTSLPGEL 222

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               +L    + +N +  LP E+G+L  L TL+L  N L     E  +L +L  L LS+N
Sbjct: 223 GELSNLDLLNLSHNKIEKLPREIGQLKNLNTLNLIYNNLYYLPSEIGELSQLIDLRLSHN 282

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L  +P EI K+  L  L L  N L+ L + ++
Sbjct: 283 YLDNIPSEIEKLRKLTTLYLGYNKLKILPTGII 315



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 150/318 (47%), Gaps = 45/318 (14%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKF-DCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +++LD++F  +  +P EIG     +KF D  +N+LK LP  +G+  +L+    + N +  
Sbjct: 20  VETLDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGKLQSLNALFLTTNYLEE 79

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSN---NLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           LP ++ + S + +L +  NKL+ L     NLI     LTEL  + N LN +P   G L  
Sbjct: 80  LPPEIGNLSTLHRLSLTENKLSHLPQEFGNLIG----LTELYLANNQLNSLPTEFGRLIN 135

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RL L                        NN L+ LP E G L KL  LDL SN+L+  
Sbjct: 136 LERLSL-----------------------SNNQLTLLPEEFGNLKKLSWLDLKSNKLESL 172

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E   L+ LS L++S N L+ LPP+I ++ +L +L  + N L +L   L       LL 
Sbjct: 173 NPEIRDLKQLSKLNISYNQLTNLPPQISEVESLIELNASYNQLTSLPGELGELSNLDLLN 232

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              +++ E    E    K +L T           L+L   NL  +PSEI E  ++  L L
Sbjct: 233 LSHNKI-EKLPREIGQLK-NLNT-----------LNLIYNNLYYLPSEIGELSQLIDLRL 279

Query: 388 SRNSIQELPPELSSCASL 405
           S N +  +P E+     L
Sbjct: 280 SHNYLDNIPSEIEKLRKL 297



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 117/250 (46%), Gaps = 44/250 (17%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L L++N +  L E+  NL  L+ L++  NKL  L   I +L  L  L++S+N + 
Sbjct: 134 INLERLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPEIRDLKQLSKLNISYNQLT 193

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P +I    +L++ + S NQL  LP  LG   NL     S+N I  LP ++     +  
Sbjct: 194 NLPPQISEVESLIELNASYNQLTSLPGELGELSNLDLLNLSHNKIEKLPREIGQLKNL-- 251

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                N L ++ NNL                   +P  IG LS+LI L L  N + +IPS
Sbjct: 252 -----NTLNLIYNNLYY-----------------LPSEIGELSQLIDLRLSHNYLDNIPS 289

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I     L   Y+G N L  LP  + +L + G                   +L++LDL  
Sbjct: 290 EIEKLRKLTTLYLGYNKLKILPTGIIQLVRFG-------------------QLTILDLKE 330

Query: 285 NSLSGLPPEI 294
           N LS +PPEI
Sbjct: 331 NLLS-IPPEI 339



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 109/252 (43%), Gaps = 18/252 (7%)

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
           A  +K+  LD+   +LT L   +      L  L    N L  +P  IG L  L  L L  
Sbjct: 15  AARNKVETLDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGKLQSLNALFLTT 74

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 275
           N +  +P  I    +L    +  N LS LP E G L  L  L L +NQL     E  +L 
Sbjct: 75  NYLEELPPEIGNLSTLHRLSLTENKLSHLPQEFGNLIGLTELYLANNQLNSLPTEFGRLI 134

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L  L LSNN L+ LP E G +  L  L L  N L +L       P    LK L      
Sbjct: 135 NLERLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESL------NPEIRDLKQL------ 182

Query: 336 NEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
              S+ + +   L  +  ++S      EL+     L+++P E+ E   +  L+LS N I+
Sbjct: 183 ---SKLNISYNQLTNLPPQISEVESLIELNASYNQLTSLPGELGELSNLDLLNLSHNKIE 239

Query: 394 ELPPELSSCASL 405
           +LP E+    +L
Sbjct: 240 KLPREIGQLKNL 251



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 17/159 (10%)

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL-LTGNPLRTLRSSLVNGPTPAL---- 325
           EA + ++  LDL+   L+ LPPEIG++    K L L  N L+TL   +  G   +L    
Sbjct: 14  EAARNKVETLDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEI--GKLQSLNALF 71

Query: 326 --LKYLRSRLPENED----SEASTTKEDLITMATRLS--VTSKELSLEGMNLSAIPSEIW 377
               YL    PE  +       S T+  L  +       +   EL L    L+++P+E  
Sbjct: 72  LTTNYLEELPPEIGNLSTLHRLSLTENKLSHLPQEFGNLIGLTELYLANNQLNSLPTEFG 131

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
               + +L LS N +  LP E  +   L   + DL +NK
Sbjct: 132 RLINLERLSLSNNQLTLLPEEFGNLKKL--SWLDLKSNK 168


>gi|124004117|ref|ZP_01688964.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123990696|gb|EAY30176.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 535

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 142/290 (48%), Gaps = 36/290 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L +N+   L  +L  L  L  LN+  N  + LP  I EL  L+ L+++ N +  +
Sbjct: 276 LEELSLWNNHFASLPPELSKLKALKYLNLEGNLFAGLPPEIVELQGLELLNLADNRLTSL 335

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
             EIG   +LV     SN L  LP  LG+  NL +     N +TSLP +L     ++ L 
Sbjct: 336 SPEIGKLQSLVALILESNGLSSLPPELGQLQNLFELYLDANRLTSLPPELGQLQNLALLS 395

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NKL+                         +P  +G L  L  L L  N++  +P  +
Sbjct: 396 IMDNKLS------------------------DLPAELGQLQALTNLALSNNQLQHLPPEL 431

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L EF +G+N L++LP ELG+L  L    + +NQL    +E  QL  L VLD+ NN
Sbjct: 432 GQLQALEEFIIGDNLLASLPPELGQLHSLTRFYVENNQLTSLPLELGQLPLLRVLDVKNN 491

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L+ LP E+G++  L+ L L GNPL            P+ ++ LR++LPE
Sbjct: 492 QLTSLPQELGQLQNLQNLYLQGNPL-----------PPSEVEALRAKLPE 530



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 127/299 (42%), Gaps = 38/299 (12%)

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           E+     + +       LK LP    +   L +    NN   SLP +L+    +  L++E
Sbjct: 246 ELDYCNTVTQLYIEEKGLKSLPPEFVQLQALEELSLWNNHFASLPPELSKLKALKYLNLE 305

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
           GN    L    I     L  L  + N L  +   IG L  L+ L L  N + S+P  +  
Sbjct: 306 GNLFAGLPPE-IVELQGLELLNLADNRLTSLSPEIGKLQSLVALILESNGLSSLPPELGQ 364

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
             +L E Y+  N L++LP ELG+L  L  L +  N+L +   E  QL+ L+ L LSNN L
Sbjct: 365 LQNLFELYLDANRLTSLPPELGQLQNLALLSIMDNKLSDLPAELGQLQALTNLALSNNQL 424

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             LPPE+G++  L + ++  N L +L         P  L  L S                
Sbjct: 425 QHLPPELGQLQALEEFIIGDNLLASL---------PPELGQLHS---------------- 459

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                TR  V       E   L+++P E+ +   +  LD+  N +  LP EL    +LQ
Sbjct: 460 ----LTRFYV-------ENNQLTSLPLELGQLPLLRVLDVKNNQLTSLPQELGQLQNLQ 507



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 104/238 (43%), Gaps = 27/238 (11%)

Query: 43  EAVDLQKLIL---AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           E V+LQ L L   A N +  L  ++  L  L  L +  N LS LP  +G+L  L  L + 
Sbjct: 315 EIVELQGLELLNLADNRLTSLSPEIGKLQSLVALILESNGLSSLPPELGQLQNLFELYLD 374

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N +  +P E+G    L       N+L +LP+ LG+   L++   SNN +  LP +L   
Sbjct: 375 ANRLTSLPPELGQLQNLALLSIMDNKLSDLPAELGQLQALTNLALSNNQLQHLPPELGQL 434

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
                                     L E I   NLL  +P  +G L  L R  +  N++
Sbjct: 435 QA------------------------LEEFIIGDNLLASLPPELGQLHSLTRFYVENNQL 470

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRL 277
            S+P  +     L    + NN L++LP ELG+L  L  L L  N L    VEA + +L
Sbjct: 471 TSLPLELGQLPLLRVLDVKNNQLTSLPQELGQLQNLQNLYLQGNPLPPSEVEALRAKL 528


>gi|429961970|gb|ELA41514.1| hypothetical protein VICG_01498 [Vittaforma corneae ATCC 50505]
          Length = 1394

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 185/410 (45%), Gaps = 58/410 (14%)

Query: 5    LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
            L+  R SG     N++L  +P    +NFD           ++L++L++ ++ I  L E++
Sbjct: 715  LEFLRLSG-----NKNLETLP----ENFDNL---------INLKQLVIQNSKITALPENI 756

Query: 65   RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             NL  L +L + +NK++ LP + GEL  L  L    N I  +PD  G    L     +SN
Sbjct: 757  GNLKSLAILWMQNNKINRLPGSFGELESLMELVADCNKIPLLPDSFGKLKNLSVLRLNSN 816

Query: 125  QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
            Q+  LP + G+  NLS+   + N +T LPE   +   +  L ++ N+L  L +N I    
Sbjct: 817  QITSLPDNFGKLTNLSECMINFNMLTRLPESFGNLKSLRVLWLKANRLESLPDNFI-DLA 875

Query: 185  MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
             L  L    N L  +PE IG L  L +  L QN +  IP S++    L E  M NNA+  
Sbjct: 876  SLEHLFLDFNRLKKIPEKIGLLKNLTKFSLAQNSLKIIPDSVTKLYELEELNMANNAIKR 935

Query: 245  LPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
            LP  +G L KL  L+L+SN+L         L RLS+L +  N    L   + +MT L+++
Sbjct: 936  LPYCMGNLRKLMELNLNSNKLDNLPDSMKNLERLSILKIHTNQFRRLSDCVYEMTNLKEI 995

Query: 304  LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
              + N +  +   +      + LK LR                               L+
Sbjct: 996  GASFNSISAIYRDI------SKLKKLR------------------------------RLN 1019

Query: 364  LEGMNLSAIPSEIWEAGE-ITKLDLSRNSIQELPPELS-SCASLQVKFSD 411
            L   N+  +P  I E  + +  LDL RN I++   E++     +Q  F D
Sbjct: 1020 LYKNNIKKLPCTIAELNDTLVLLDLRRNQIEDFGSEVTFGKFEIQAIFGD 1069



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 175/405 (43%), Gaps = 61/405 (15%)

Query: 39   DKWWEAVDLQKLILAHNNIEKLKED----------------------------------- 63
            D +    +L+KL +   NI++L ED                                   
Sbjct: 639  DTFVNLANLKKLDICDANIQQLPEDFGKLQSLEQLQIKSVKLEKFPESCKNMANLKRLEV 698

Query: 64   ----------LRNLPLLTVLNVSHNK-LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
                        NL  L  L +S NK L  LP     L  LK L +  + I  +P+ IG+
Sbjct: 699  RNTKVATLFGFENLVNLEFLRLSGNKNLETLPENFDNLINLKQLVIQNSKITALPENIGN 758

Query: 113  ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
              +L      +N++  LP S G   +L +  A  N I  LP+       +S L +  N++
Sbjct: 759  LKSLAILWMQNNKINRLPGSFGELESLMELVADCNKIPLLPDSFGKLKNLSVLRLNSNQI 818

Query: 173  TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
            T L +N     T L+E + + N+L  +PE+ G+L  L  L L  NR+ S+P +     SL
Sbjct: 819  TSLPDNF-GKLTNLSECMINFNMLTRLPESFGNLKSLRVLWLKANRLESLPDNFIDLASL 877

Query: 233  AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
               ++  N L  +P ++G L  L    L  N LK       +L  L  L+++NN++  LP
Sbjct: 878  EHLFLDFNRLKKIPEKIGLLKNLTKFSLAQNSLKIIPDSVTKLYELEELNMANNAIKRLP 937

Query: 292  PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
              +G +  L +L L  N L  L  S+ N    ++LK     +  N+    S    D +  
Sbjct: 938  YCMGNLRKLMELNLNSNKLDNLPDSMKNLERLSILK-----IHTNQFRRLS----DCVYE 988

Query: 352  ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
             T L    KE+     ++SAI  +I +  ++ +L+L +N+I++LP
Sbjct: 989  MTNL----KEIGASFNSISAIYRDISKLKKLRRLNLYKNNIKKLP 1029



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 163/358 (45%), Gaps = 24/358 (6%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLN-VSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           V L+ L L HN I  + +++ NL  L  LN +    L+ LP     L  LK LD+   +I
Sbjct: 598 VSLRTLNLYHNPIVSIADNVGNLESLEALNLIGWGNLTSLPDTFVNLANLKKLDICDANI 657

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
            ++P++ G   +L +    S +L++ P S     NL   +  N  + +L     +   + 
Sbjct: 658 QQLPEDFGKLQSLEQLQIKSVKLEKFPESCKNMANLKRLEVRNTKVATL-FGFENLVNLE 716

Query: 164 KLDVEGNK-LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            L + GNK L  L  N   +   L +L+   + +  +PE IG+L  L  L +  N+I  +
Sbjct: 717 FLRLSGNKNLETLPENF-DNLINLKQLVIQNSKITALPENIGNLKSLAILWMQNNKINRL 775

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P S     SL E     N +  LP   GKL  L  L L+SNQ+        +L  LS   
Sbjct: 776 PGSFGELESLMELVADCNKIPLLPDSFGKLKNLSVLRLNSNQITSLPDNFGKLTNLSECM 835

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT--PALLKYLR-SRLPENED 338
           ++ N L+ LP   G + +LR L L  N L +L  + ++  +     L + R  ++PE   
Sbjct: 836 INFNMLTRLPESFGNLKSLRVLWLKANRLESLPDNFIDLASLEHLFLDFNRLKKIPE--- 892

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                 K  L+   T+ S+    L +       IP  + +  E+ +L+++ N+I+ LP
Sbjct: 893 ------KIGLLKNLTKFSLAQNSLKI-------IPDSVTKLYELEELNMANNAIKRLP 937



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 167/371 (45%), Gaps = 51/371 (13%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L VL++S N+L++LP +I EL  LK L++  N +  +P+   S   L   + + N +K +
Sbjct: 45  LIVLSLSSNQLNKLPKSIAELSHLKCLNLQCNMLEAVPEFPPSIRTL---NLNKNLIKAI 101

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P S+    ++     +NN I  LP+ +A+ S +  L ++GN+L  L +  ++    L  L
Sbjct: 102 PKSIFNLKSIEKLYLNNNLIDFLPDSIAELSTLKLLSMQGNQLIELPD--LSGLPDLRHL 159

Query: 190 IASKNLLNGMPE-------------TIG--------SLSRLIRLDLHQNRILSIPSSISG 228
             + N +  +P              +I         SLS L +LDL  N+I +IP+ I  
Sbjct: 160 DVAFNRIKELPRLSPKLATLTARFNSIAKIDSMCSPSLSYLKKLDLLGNQIKTIPAEIGN 219

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL------------KEYCVEACQLR 276
             S+   Y+  N +  +P  +  L  L  L L SN++            K Y +   Q  
Sbjct: 220 LNSVEMLYLQFNNIVEVPRSIFSLKNLKQLHLGSNKISKLPARLTGKAKKSYLIHF-QKN 278

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L+VLDLSNN ++ +P  I ++  L+ L L  N +  LR S        +LK   ++   +
Sbjct: 279 LTVLDLSNNKITQIPKYITELVNLKVLNLRSNKIALLRGSFKKMKGLKVLKLSLNQQLGH 338

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
             S+    K   I +A+   + S            IP EI E   +  L L+ N I  LP
Sbjct: 339 FPSQILNLKSLKILLASFCKIES------------IPREISELTNLEVLILNGNKIPALP 386

Query: 397 PELSSCASLQV 407
             +   A L++
Sbjct: 387 KSIKHLAKLRI 397



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 173/396 (43%), Gaps = 51/396 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           ++KL L +N I+ L + +  L  L +L++  N+L ELP   G L  L+ LDV+FN I ++
Sbjct: 111 IEKLYLNNNLIDFLPDSIAELSTLKLLSMQGNQLIELPDLSG-LPDLRHLDVAFNRIKEL 169

Query: 107 PD---EIGSATA------------------LVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
           P    ++ + TA                  L K D   NQ+K +P+ +G   ++      
Sbjct: 170 PRLSPKLATLTARFNSIAKIDSMCSPSLSYLKKLDLLGNQIKTIPAEIGNLNSVEMLYLQ 229

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
            N I  +P  +     + +L +  NK++ L   L           A K+ L      I  
Sbjct: 230 FNNIVEVPRSIFSLKNLKQLHLGSNKISKLPARLTGK--------AKKSYL------IHF 275

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ- 264
              L  LDL  N+I  IP  I+   +L    + +N ++ L     K+  L  L L  NQ 
Sbjct: 276 QKNLTVLDLSNNKITQIPKYITELVNLKVLNLRSNKIALLRGSFKKMKGLKVLKLSLNQQ 335

Query: 265 LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           L  +  +   L+ L +L  S   +  +P EI ++T L  L+L GN +  L  S+ +    
Sbjct: 336 LGHFPSQILNLKSLKILLASFCKIESIPREISELTNLEVLILNGNKIPALPKSIKHLAKL 395

Query: 324 ALLKYLRSRLPEN-EDSEASTTKE-----DLITMATRLSVTSKEL------SLEGMNLSA 371
            +L   R   PEN  D E  +  E     D      RL  T  EL      +L+G+ +  
Sbjct: 396 RILGLGRFG-PENISDCEEYSRNESKKISDDRNRIKRLPDTITELQNLEILNLDGVEIEI 454

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +P  I    ++ KL L+  + ++LP  +   ASL++
Sbjct: 455 LPENIGRLQKMKKLILNCGNFKQLPESICQIASLRI 490



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 166/395 (42%), Gaps = 66/395 (16%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N I++L + +  L  L +LN+   ++  LP  IG L  +K L ++  +  ++P+ I   
Sbjct: 426 RNRIKRLPDTITELQNLEILNLDGVEIEILPENIGRLQKMKKLILNCGNFKQLPESICQI 485

Query: 114 TALVKFDCSS-NQLKELPSS-----------LGRCL-------NLSDFKA------SNNC 148
            +L    C S   L  LPS            L +C        N+ D K+       N  
Sbjct: 486 ASLRILSCKSCRNLSSLPSGLSILKNLKVLVLNKCYSLLGLGRNVGDIKSLRVLRVRNIR 545

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL-NGMPETIGSLS 207
           +T LP    + + +  LD+  N+L+VL ++       L  ++ S+++  N + E    L 
Sbjct: 546 LTELPSSFENLTNLRVLDLASNELSVLPDS-------LGNVVYSRDIKNNNVIECKSGLV 598

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEF-YMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
            L  L+L+ N I+SI  ++    SL     +G   L++LP     L+ L  LD+    ++
Sbjct: 599 SLRTLNLYHNPIVSIADNVGNLESLEALNLIGWGNLTSLPDTFVNLANLKKLDICDANIQ 658

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS--SLVNGPTP 323
           +   +  +L+ L  L + +  L   P     M  L++L +    + TL    +LVN    
Sbjct: 659 QLPEDFGKLQSLEQLQIKSVKLEKFPESCKNMANLKRLEVRNTKVATLFGFENLVN---- 714

Query: 324 ALLKYLR-------SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
             L++LR         LPEN D        +LI +        K+L ++   ++A+P  I
Sbjct: 715 --LEFLRLSGNKNLETLPENFD--------NLINL--------KQLVIQNSKITALPENI 756

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
                +  L +  N I  LP       SL    +D
Sbjct: 757 GNLKSLAILWMQNNKINRLPGSFGELESLMELVAD 791


>gi|169260657|gb|ACA52055.1| densin 11-17 [Rattus norvegicus]
          Length = 447

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 181/407 (44%), Gaps = 73/407 (17%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 32  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 80  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 139

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 140 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 199

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 200 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 258

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 259 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 318

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           LPP IG + +LR L +  N L                      LP               
Sbjct: 319 LPPTIGYLHSLRTLAVDENFL--------------------PELPRE------------- 345

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
            + +R +VT   +SL    L  +P EI +   +  L+LS N ++ LP
Sbjct: 346 -IGSRKNVTV--MSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLP 389



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 136/268 (50%), Gaps = 6/268 (2%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+ +  F  A  G      V L+ L L  N+++ L + +  L  L  L++ +N+ SELP 
Sbjct: 151 NDAFLEFLPANFG----RLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE 206

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            + ++  L+ L +  N++  +P  IG    LV  D S N+++ +   +  C  L D   S
Sbjct: 207 VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLS 266

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +N +  LP+ +    K++ L V+ N+LT+L N  I + ++L E   S N L  +P TIG 
Sbjct: 267 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGY 325

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  L  L + +N +  +P  I    ++    + +N L  LP E+G++ +L  L+L  N+L
Sbjct: 326 LHSLRTLAVDENFLPELPREIGSRKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRL 385

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPP 292
           K       +L+ L+ L LS+N    L P
Sbjct: 386 KNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 120/320 (37%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 24  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 83

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 84  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 119

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L KL           
Sbjct: 120 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL----------- 168

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 169 -----------RILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 201

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE  D   +                 +EL ++   L  +P  I +   +  LD
Sbjct: 202 ----SELPEVLDQIQNL----------------RELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N I+ +  ++S C +L+
Sbjct: 242 MSKNRIETVDMDISGCEALE 261


>gi|418710297|ref|ZP_13271068.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410769233|gb|EKR44475.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 423

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 191/407 (46%), Gaps = 51/407 (12%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           +++ L+      +L+LS + L+ +PN++              +  +LQKL L  N    L
Sbjct: 33  LEKALQNPADVRNLDLSFQGLKTLPNKI-------------GQLKNLQKLDLGGNEPTIL 79

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +++  L  L  LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +
Sbjct: 80  SKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLN 139

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
             +N+L  LP  +G+  NL +    +N + SLP ++     +  LD+  N+ T +S  ++
Sbjct: 140 LDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVM 199

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
              T L  L    N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N
Sbjct: 200 LLET-LENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGEN 258

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
                P E+ +L  L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  
Sbjct: 259 RFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPD 318

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L++L L+GN +  L   ++       LK L                              
Sbjct: 319 LQELHLSGNKITILPKEILQ------LKNLEW---------------------------- 344

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             LSL    L+A+P EI +  ++ +L+L  N +  LP E+    +LQ
Sbjct: 345 --LSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQ 389



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 37/213 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                   P  ++ L+S                            K L L     + +  
Sbjct: 172 --------PTEIEQLKSL---------------------------KNLDLNHNEFTTVSK 196

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           E+     +  LDL  N ++ +P E+    SL+V
Sbjct: 197 EVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 65/120 (54%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N + +  +++  L  L  L++ HN+++ LP  + +L  L+ L +S N I  +P EI   
Sbjct: 280 YNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L     S+N+L  LP  +G+   L   +  NN +T+LP+++     + +L+++ N ++
Sbjct: 340 KNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|307205957|gb|EFN84083.1| Protein LAP2 [Harpegnathos saltator]
          Length = 1018

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 180/395 (45%), Gaps = 50/395 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L++ +L DVP +V+            +E   L+KL L  N I+ L   L     L VL
Sbjct: 22  LQLNHCNLYDVPPDVF-----------IYERT-LEKLYLDANRIKDLPRPLFQCHELRVL 69

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N++S LP AI  L  L+ LD+S NSI ++PD I    +L   D S N  +  P ++
Sbjct: 70  SLSDNEVSTLPPAIASLINLEYLDLSKNSIKELPDSIKECKSLRSIDISVNPFERFPDAI 129

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
              + L +   ++  I  LP +    S +  L++  N +  L  ++ +    L  L    
Sbjct: 130 THIVGLRELYINDAYIEYLPANFGRLSALKTLELRENNMMTLPKSM-SRLVNLQRLDIGN 188

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N    +PE +G L  L  L +  N I  IP +I     L  F    NA+  LP E+    
Sbjct: 189 NDFTELPEVVGDLINLTELWIDGNDIRRIPGNIEQLYRLNHFDCTMNAIHTLPMEIRGWR 248

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +  ++L SN++ E     C LR  V L + +N L+ LP +IG+M++L +L++T N L  
Sbjct: 249 DISIMNLSSNEMYELPDTLCYLRTVVTLKIDDNQLNALPNDIGQMSSLEELIVTKNFLEY 308

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L SS+       LL+ L                                L+ +   L A+
Sbjct: 309 LPSSI------GLLRKLHC------------------------------LNADNNYLRAL 332

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           P+EI     ++ L L  N++  +PPEL   +SL+V
Sbjct: 333 PAEIGSCTALSLLSLRSNNLTRVPPELGHLSSLRV 367



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 1/220 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+LQ+L + +N+  +L E + +L  LT L +  N +  +P  I +L+ L   D + N+I 
Sbjct: 179 VNLQRLDIGNNDFTELPEVVGDLINLTELWIDGNDIRRIPGNIEQLYRLNHFDCTMNAIH 238

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EI     +   + SSN++ ELP +L     +   K  +N + +LP D+   S + +
Sbjct: 239 TLPMEIRGWRDISIMNLSSNEMYELPDTLCYLRTVVTLKIDDNQLNALPNDIGQMSSLEE 298

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V  N L  L ++ I     L  L A  N L  +P  IGS + L  L L  N +  +P 
Sbjct: 299 LIVTKNFLEYLPSS-IGLLRKLHCLNADNNYLRALPAEIGSCTALSLLSLRSNNLTRVPP 357

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            +    SL    + NN +  LP  +  LS L  L L  NQ
Sbjct: 358 ELGHLSSLRVLNLVNNCIKFLPVSMLNLSNLKALWLSDNQ 397



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 16/136 (11%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           RT  +L + +  L  +PN++              +   L++LI+  N +E L   +  L 
Sbjct: 271 RTVVTLKIDDNQLNALPNDI-------------GQMSSLEELIVTKNFLEYLPSSIGLLR 317

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  LN  +N L  LPA IG    L  L +  N++ ++P E+G  ++L   +  +N +K 
Sbjct: 318 KLHCLNADNNYLRALPAEIGSCTALSLLSLRSNNLTRVPPELGHLSSLRVLNLVNNCIKF 377

Query: 129 LPSSLGRCLNLSDFKA 144
           LP S+   LNLS+ KA
Sbjct: 378 LPVSM---LNLSNLKA 390


>gi|24215147|ref|NP_712628.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074466|ref|YP_005988783.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196215|gb|AAN49646.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458255|gb|AER02800.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 498

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 168/364 (46%), Gaps = 11/364 (3%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 48  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLA 107

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 108 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 167

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 168 LWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPV 226

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+  P E+G+L  L  L    N+L     E  QL+ L  L+L 
Sbjct: 227 EIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLV 286

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+  P EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 287 NNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAENGV 340

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLS-AIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
            +   + +A    +   ELSLE  + S + P  I +   +  L+L       LP E+S  
Sbjct: 341 YRN--LNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRL 398

Query: 403 ASLQ 406
            +L+
Sbjct: 399 KNLK 402



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 188/465 (40%), Gaps = 95/465 (20%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTVLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL---------------SNN 178
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L               S+N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDN 219

Query: 179 LIASWTM-------LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
            +A+  +       L EL    N L   P+ IG L  L  L   +NR+ ++P  +    +
Sbjct: 220 QLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQN 279

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL-------------------------- 265
           L    + NN L+  P E+G+L  L  L+L  N L                          
Sbjct: 280 LQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENG 339

Query: 266 --------KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR--- 314
                   +E  ++  +L L   D S       P  I K   LR L L      TL    
Sbjct: 340 VYRNLNLAQEEPLKVFELSLEYKDFS----QSFPKVILKFRNLRGLNLYDCGFSTLPKEI 395

Query: 315 SSLVNGPTPALLKYLRSRLP--ENEDSEASTTK--EDLITMATRLSVTSKE--------- 361
           S L N      LKYL   L   +N  SE    K  E L   A  L    KE         
Sbjct: 396 SRLKN------LKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQK 449

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           LSL    L   P+EI +  ++ KLDLS N     P E+    +LQ
Sbjct: 450 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 120/292 (41%), Gaps = 43/292 (14%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS+  L  +P E+              +  +LQ+L L +N +    +++  L  L +
Sbjct: 213 TLNLSDNQLATLPVEI-------------GQLQNLQELYLRNNRLTVFPKEIGQLQNLQM 259

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL------ 126
           L    N+L+ LP  +G+L  L++L++  N +   P EIG    L   +   N L      
Sbjct: 260 LCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERK 319

Query: 127 ---KELPSS-----------LGRCLNLSD------FKAS---NNCITSLPEDLADCSKMS 163
              K  P S           + R LNL+       F+ S    +   S P+ +     + 
Sbjct: 320 RIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLR 379

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            L++     + L    I+    L  L    N L  +P  IG L  L  L+L  N +  +P
Sbjct: 380 GLNLYDCGFSTLPKE-ISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLP 438

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
             I    +L +  +  N L   PAE+ +L KL  LDL  NQ   +  E  +L
Sbjct: 439 KEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL 490



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 30/244 (12%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN---- 101
           +LQ L    N +  L +++  L  L  LN+ +N+L+  P  IG+L  L+ L++  N    
Sbjct: 256 NLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSL 315

Query: 102 ----SIMKI-PD-----------------EIGSATALVKFDCS---SNQLKELPSSLGRC 136
                I K+ PD                  +     L  F+ S    +  +  P  + + 
Sbjct: 316 KERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKF 375

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
            NL      +   ++LP++++    +  L +  N L  + +  I     L  L    N L
Sbjct: 376 RNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSE-IGQLKNLEALNLEANEL 434

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P+ IG L  L +L LHQN +   P+ I     L +  +  N  +  P E+GKL  L 
Sbjct: 435 ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494

Query: 257 TLDL 260
           TL+L
Sbjct: 495 TLNL 498


>gi|449495404|ref|XP_004174702.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
           [Taeniopygia guttata]
          Length = 1780

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 156/326 (47%), Gaps = 48/326 (14%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           ++  ++L+KL L+ N I++L  ++ N   L  L++S N + E+P +I     L+  D S 
Sbjct: 6   FFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSG 65

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + ++P+      +LV    +   L+ LP+ +G   NL   +   N + +LP  L+   
Sbjct: 66  NPLSRLPEGFTQLRSLVHLALNDVSLQSLPTDIGNLANLVTLELRENLLKTLPTSLSFLV 125

Query: 161 KMSKLDVEGNKLTVLSNNL----------------------------------------- 179
           K+ +LD+ GN L VL + L                                         
Sbjct: 126 KLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQ 185

Query: 180 ----IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
               ++    LT+L+ S+NLL  +P+ IG L +L  L + QNR+  +  SI  C +L+E 
Sbjct: 186 LPNEVSGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTDMTESIGDCENLSEL 245

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPE 293
            +  N L+ALP  LGKL+KL  L++  N+L     E   C   LSVL L +N L+ LPPE
Sbjct: 246 ILTENMLTALPKSLGKLAKLTNLNVDRNRLTALPAEIGGC-ANLSVLSLRDNRLALLPPE 304

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVN 319
           +   T L  L + GN L+ L  +L N
Sbjct: 305 LANTTELHVLDVAGNRLQNLPFALTN 330



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 125 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLE 184

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P+E+    AL     S N L+ +P  +G+   LS  K   N +T + E + DC  +S 
Sbjct: 185 QLPNEVSGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTDMTESIGDCENLS- 243

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++N+L  +P+++G L++L  L++ +NR+ ++P+
Sbjct: 244 -----------------------ELILTENMLTALPKSLGKLAKLTNLNVDRNRLTALPA 280

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 281 EIGGCANLSVLSLRDNRLALLPPELANTTELHVLDVAGNRLQNLPFALTNLNLKALWLAE 340

Query: 285 N 285
           N
Sbjct: 341 N 341



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 149/318 (46%), Gaps = 42/318 (13%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDFKASNNCIT 150
           L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C  L ++DF  S N ++
Sbjct: 12  LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADF--SGNPLS 69

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
            LPE                 L  L+ N ++              L  +P  IG+L+ L+
Sbjct: 70  RLPEGFTQL----------RSLVHLALNDVS--------------LQSLPTDIGNLANLV 105

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            L+L +N + ++P+S+S    L +  +G N L  LP  LG L  L  L L  NQL     
Sbjct: 106 TLELRENLLKTLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPP 165

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E   LR L  LD+S N L  LP E+  +  L  LLL+ N L  +   +      ++LK  
Sbjct: 166 ELGNLRRLVCLDVSENKLEQLPNEVSGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVD 225

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           ++RL         T   + I     LS    EL L    L+A+P  + +  ++T L++ R
Sbjct: 226 QNRL---------TDMTESIGDCENLS----ELILTENMLTALPKSLGKLAKLTNLNVDR 272

Query: 390 NSIQELPPELSSCASLQV 407
           N +  LP E+  CA+L V
Sbjct: 273 NRLTALPAEIGGCANLSV 290


>gi|426250981|ref|XP_004019210.1| PREDICTED: leucine-rich repeat-containing protein 1 [Ovis aries]
          Length = 473

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 175/362 (48%), Gaps = 36/362 (9%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           ++++ V L+KL L+ N I++L  ++ N   L  L+VS N + E+P +I     L+  D S
Sbjct: 3   QFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFS 62

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N + ++P+       L     +   L+ LP ++G   NL+  +   N +T LP+ L   
Sbjct: 63  GNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQL 122

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++ +LD+  N++  L  + I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+
Sbjct: 123 RRLEELDLGNNEIYNLPES-IGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRL 181

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV 279
             +P  ISG  SL +  +  N L  LP  +GKL K                      LS+
Sbjct: 182 ERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKK----------------------LSI 219

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L +  N L+ LP  +G   +L +L+LT N L TL  S+        LK L S L  + + 
Sbjct: 220 LKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSI------GKLKKL-SNLNADRNK 272

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
             S  KE  I     L+V      +    L+ IP+E+  A E+  LD++ N +  LP  L
Sbjct: 273 LVSLPKE--IGGCCSLTV----FCVRDNRLTRIPAEVSRAAELHVLDVAGNRLSHLPLSL 326

Query: 400 SS 401
           ++
Sbjct: 327 TA 328



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 135/245 (55%), Gaps = 1/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 101 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 160

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    K+S L
Sbjct: 161 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSIL 220

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 221 KVDQNRLTQLPE-AVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 279

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L L  L LS+N
Sbjct: 280 IGGCCSLTVFCVRDNRLTRIPAEVSRAAELHVLDVAGNRLSHLPLSLTALNLKALWLSDN 339

Query: 286 SLSGL 290
               L
Sbjct: 340 QAQPL 344



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 149/325 (45%), Gaps = 40/325 (12%)

Query: 85  AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDF 142
           A   +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C  L ++DF
Sbjct: 2   AQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADF 61

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NLL  +P++
Sbjct: 62  --SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENLLTYLPDS 118

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           +  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L       
Sbjct: 119 LTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL------- 171

Query: 263 NQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
                 C          LD+S N L  LP EI  +T+L  L+++ N L  L   +     
Sbjct: 172 -----LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKK 216

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
            ++LK  ++RL   +  EA    E L            EL L    L  +P  I +  ++
Sbjct: 217 LSILKVDQNRL--TQLPEAVGDCESLT-----------ELVLTENRLLTLPKSIGKLKKL 263

Query: 383 TKLDLSRNSIQELPPELSSCASLQV 407
           + L+  RN +  LP E+  C SL V
Sbjct: 264 SNLNADRNKLVSLPKEIGGCCSLTV 288



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 41/232 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +L  S N +  +P  I +  +L+ LD+ +N I  IP SIS C +L       N L+ L
Sbjct: 10  LRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRL 69

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P    +L  L  L ++   L+        L  L+ L+L  N L+ LP  + ++  L +L 
Sbjct: 70  PESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELD 129

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N +  L  S+      ALL                                 K+L L
Sbjct: 130 LGNNEIYNLPESI-----GALLHL-------------------------------KDLWL 153

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 154 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 201


>gi|148697568|gb|EDL29515.1| scribbled homolog (Drosophila), isoform CRA_b [Mus musculus]
          Length = 1040

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 61/365 (16%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + +R+   L L    LR++P   ++              ++L+KL L+ N I++L 
Sbjct: 29  EEIYRYSRSLEELLLDANQLRELPKPFFR-------------LLNLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++PD      +L     
Sbjct: 76  PEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLAL 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A
Sbjct: 136 NDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGA 195

Query: 182 --------------------------------SWTMLTEL-------------IASKNLL 196
                                           S   L EL             + S+NLL
Sbjct: 196 LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLL 255

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +PE IG L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL 
Sbjct: 256 QRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLT 315

Query: 257 TLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            L++  N L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L 
Sbjct: 316 NLNVDRNHLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLP 374

Query: 315 SSLVN 319
            +L +
Sbjct: 375 FALTH 379



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPH 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 24/242 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 NS 286
           N 
Sbjct: 390 NQ 391


>gi|417761946|ref|ZP_12409943.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409942208|gb|EKN87828.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 305

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/240 (37%), Positives = 126/240 (52%), Gaps = 2/240 (0%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           +S N+L+ LP  IG+L  L+ LD+  N +  +P EIG    L     SSNQL  LP   G
Sbjct: 1   MSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESG 60

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           +  NL +   S+N +T+LP+++     +  L+++ N+LT L    I     L  L  S N
Sbjct: 61  KLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKE-IEQLKNLQTLNLSDN 119

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P  IG L  L  L+L  N++ ++P  I    +L    +  N L+ L  E+GKL  
Sbjct: 120 QLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQN 179

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+LHSNQL     E  QL+ L  L LS N L  LP EIG++  L++L L  N L  L
Sbjct: 180 LQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTAL 239



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 1/231 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L+ N +  L  +   L  L  LN+S N+L+ LP  IG+L  L++L++  N +  
Sbjct: 41  NLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTT 100

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +  EI     L   + S NQL  LP  +G+  NL     S+N +T+LP ++     +  L
Sbjct: 101 LFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTL 160

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++ GN+LT LS   I     L +L    N L  + + I  L  L  L L  NR++ +P  
Sbjct: 161 NLSGNQLTTLSIE-IGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKE 219

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
           I    +L E  + NN L+ALP E+G+L  L TL L+ N+L  +  E  QL+
Sbjct: 220 IGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLK 270



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 2/264 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N +  L  ++  L  L  L +S N+L+ LP   G+L  L+ L++S N +  
Sbjct: 18  NLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTT 77

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +  SNQL  L   + +  NL     S+N +T+LP ++     +  L
Sbjct: 78  LPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 137

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT L    I     L  L  S N L  +   IG L  L  L+LH N++ ++   
Sbjct: 138 NLSDNQLTTLPIE-IGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKE 196

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    +  N L  LP E+G+L  L  L+L +NQL    +E  QL+ L  L L  
Sbjct: 197 IEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYK 256

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGN 308
           N L   P EIG++  L+ L L G+
Sbjct: 257 NRLMTFPKEIGQLKNLQTLYLGGH 280



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 143/315 (45%), Gaps = 42/315 (13%)

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           +S N +  +P EIG    L + D   N+L  LP  +G+  NL     S+N +T+LP +  
Sbjct: 1   MSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESG 60

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
               + +L++  N+LT L                        P+ IG L  L  L+L  N
Sbjct: 61  KLENLQELNLSDNQLTTL------------------------PQEIGQLQNLQTLNLKSN 96

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++ ++   I    +L    + +N L+ LP E+GKL  L TL+L  NQL    +E  +L+ 
Sbjct: 97  QLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQN 156

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  L+LS N L+ L  EIGK+  L+ L L  N L TL   +        LK L++     
Sbjct: 157 LHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQ------LKNLQT----- 205

Query: 337 EDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                S +   L+ +   +      +EL+L    L+A+P EI +   +  L L +N +  
Sbjct: 206 ----LSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMT 261

Query: 395 LPPELSSCASLQVKF 409
            P E+    +LQ  +
Sbjct: 262 FPKEIGQLKNLQTLY 276


>gi|260788644|ref|XP_002589359.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
 gi|229274536|gb|EEN45370.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
          Length = 862

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 137/273 (50%), Gaps = 2/273 (0%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L++  +  + E++ ++  L  L+VS N L+ +P AIG L  L  LD   N + ++P  
Sbjct: 18  LDLSNQGLTSIPEEVFDITDLEDLDVSDNNLTSIPEAIGRLQKLYRLDAYSNMLTRLPQA 77

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           IGS   L       NQL E+PS +    NL      NN +++ P  +    K+ +L + G
Sbjct: 78  IGSLQKLTHLYIYDNQLTEMPSGVCSLPNLEVLSVGNNKLSTFPPGVEKLQKLRELYING 137

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+LT + +  + S   L  L  S N L+  P  +  L +L  L ++ N++  +PS +   
Sbjct: 138 NQLTEVPSG-VCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSL 196

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLS 288
            +L    + NN LS  P  + KL KL  L ++ NQL E     C L  L VL +SNN LS
Sbjct: 197 PNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVSNNKLS 256

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
             PP + K+  LR+L +  N L  + + + + P
Sbjct: 257 TFPPGVEKLQKLRELYIYDNQLTEVPTGVCSLP 289



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 132/296 (44%), Gaps = 38/296 (12%)

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +   L+  D S+  L  +P  +    +L D   S+N +TS+PE +    K+ +LD     
Sbjct: 11  TVNGLLTLDLSNQGLTSIPEEVFDITDLEDLDVSDNNLTSIPEAIGRLQKLYRLD----- 65

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                              A  N+L  +P+ IGSL +L  L ++ N++  +PS +    +
Sbjct: 66  -------------------AYSNMLTRLPQAIGSLQKLTHLYIYDNQLTEMPSGVCSLPN 106

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L    +GNN LS  P  + KL KL  L ++ NQL E     C L  L VL +SNN+LS  
Sbjct: 107 LEVLSVGNNKLSTFPPGVEKLQKLRELYINGNQLTEVPSGVCSLPNLEVLGVSNNNLSTF 166

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           PP + K+  LR+L + GN L  + S + + P   +L      +  N  S      E L  
Sbjct: 167 PPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLG-----VSNNNLSTFPPGVEKLQK 221

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +        +EL + G  L+ +PS +     +  L +S N +   PP +     L+
Sbjct: 222 L--------RELYIYGNQLTEVPSGVCSLPNLEVLSVSNNKLSTFPPGVEKLQKLR 269



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 38/264 (14%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           SN  +TS+PE++ D + +  LDV  N LT +    I     L  L A  N+L  +P+ IG
Sbjct: 21  SNQGLTSIPEEVFDITDLEDLDVSDNNLTSIPE-AIGRLQKLYRLDAYSNMLTRLPQAIG 79

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           SL +L  L ++ N++  +PS +    +L    +GNN LS  P  + KL KL  L ++ NQ
Sbjct: 80  SLQKLTHLYIYDNQLTEMPSGVCSLPNLEVLSVGNNKLSTFPPGVEKLQKLRELYINGNQ 139

Query: 265 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           L E     C L  L VL +SNN+LS  PP + K+  LR+L + GN L  + S + + P  
Sbjct: 140 LTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPN- 198

Query: 324 ALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT 383
                                          L V    L +   NLS  P  + +  ++ 
Sbjct: 199 -------------------------------LEV----LGVSNNNLSTFPPGVEKLQKLR 223

Query: 384 KLDLSRNSIQELPPELSSCASLQV 407
           +L +  N + E+P  + S  +L+V
Sbjct: 224 ELYIYGNQLTEVPSGVCSLPNLEV 247



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 143/338 (42%), Gaps = 31/338 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L +  N + ++   + +LP L VL VS+N LS  P  + +L  L+ L +  N + ++
Sbjct: 130 LRELYINGNQLTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEV 189

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  + S   L     S+N L   P  + +   L +     N +T +P  +     +  L 
Sbjct: 190 PSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLS 249

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  NKL+      +     L EL    N L  +P  + SL  L  L +  N I  +P  +
Sbjct: 250 VSNNKLSTFPPG-VEKLQKLRELYIYDNQLTEVPTGVCSLPDLEWLSVGNNPIRRLPRQV 308

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH-----------------------SN 263
               +L + Y G+     +P E+G L  L  L L                        SN
Sbjct: 309 LQLKTLEKLYAGDCKFDMVPDEVGNLQHLWFLALEYNLLKTLPSTMRHLHNLREVRLWSN 368

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
           +   +    C+L  +  L + NN+++ LP  + +   L+ L ++GNPL      +    T
Sbjct: 369 KFDTFPEVLCELPAMEKLVIRNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDVCEQGT 428

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
            A++ +L+      +++E ++ K D++  A    +  K
Sbjct: 429 GAIMAFLK------QEAEKTSRKSDIMEAAAETELERK 460



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 100/235 (42%), Gaps = 40/235 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           LN +P+T+  L   + LDL    + SIP  +     L +  + +N L+++P  +G+L KL
Sbjct: 5   LNLLPQTVNGL---LTLDLSNQGLTSIPEEVFDITDLEDLDVSDNNLTSIPEAIGRLQKL 61

Query: 256 GTLDLHS-----------------------NQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
             LD +S                       NQL E     C L  L VL + NN LS  P
Sbjct: 62  YRLDAYSNMLTRLPQAIGSLQKLTHLYIYDNQLTEMPSGVCSLPNLEVLSVGNNKLSTFP 121

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
           P + K+  LR+L + GN L  + S + + P   +L      +  N  S      E L  +
Sbjct: 122 PGVEKLQKLRELYINGNQLTEVPSGVCSLPNLEVLG-----VSNNNLSTFPPGVEKLQKL 176

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                   +EL + G  L+ +PS +     +  L +S N++   PP +     L+
Sbjct: 177 --------RELYIYGNQLTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLR 223


>gi|291240668|ref|XP_002740240.1| PREDICTED: ERBB2 interacting protein-like [Saccoglossus
           kowalevskii]
          Length = 1112

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 166/354 (46%), Gaps = 48/354 (13%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           VDL+K     N I KL   +  L  L +L+++ N+L+ LP +I +L  L +L +  NS+ 
Sbjct: 57  VDLKK-----NRIAKLPPSISTLKQLRMLHMNSNRLTSLPGSICKLRNLSTLCLERNSLK 111

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+ I +   L +   ++NQ+  LP  +G+  NL  F  S N + S+P+ + D +K+  
Sbjct: 112 TLPNSICNLQQLERLYLNNNQISHLPECIGKLRNLETFLISKNSLVSIPDSIGDLNKLQD 171

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS--- 221
                NKL+ L  + I     LT+L  S+N L  +P++I  L++L  L LH N +     
Sbjct: 172 FQAHRNKLSSLPES-IGKLQNLTKLWVSRNSLTSIPDSICDLNKLQDLRLHTNNLSYLPD 230

Query: 222 --IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
             +P SI     L +  +  N +  LP  +G+L  L  L + SN L       C L +L 
Sbjct: 231 RIVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLRMSSNSLTRLPHSICDLNKLE 290

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            L L  N LS LP +IGK+  ++ L ++GN ++ L  S+ +                   
Sbjct: 291 DLQLHMNKLSSLPSQIGKLKHVKNLSISGNSIKILPDSIGD------------------- 331

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
                     +   TRL          G  +S +P  IWE   +T + +SRNS+
Sbjct: 332 ----------LQQLTRLYA-------HGNQISHLPESIWELRNLTTMWISRNSL 368



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 189/457 (41%), Gaps = 103/457 (22%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N+++ L   + NL  L  L +++N++S LP  IG+L  L++  +S NS++ 
Sbjct: 99  NLSTLCLERNSLKTLPNSICNLQQLERLYLNNNQISHLPECIGKLRNLETFLISKNSLVS 158

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IPD IG    L  F    N+L  LP S+G+  NL+    S N +TS+P+ + D +K+  L
Sbjct: 159 IPDSIGDLNKLQDFQAHRNKLSSLPESIGKLQNLTKLWVSRNSLTSIPDSICDLNKLQDL 218

Query: 166 DVEGNKLTVL---------------------SNNL------IASWTMLTELIASKNLLNG 198
            +  N L+ L                      NN+      I     L +L  S N L  
Sbjct: 219 RLHTNNLSYLPDRIVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLRMSSNSLTR 278

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P +I  L++L  L LH N++ S+PS I     +    +  N++  LP  +G L +L  L
Sbjct: 279 LPHSICDLNKLEDLQLHMNKLSSLPSQIGKLKHVKNLSISGNSIKILPDSIGDLQQLTRL 338

Query: 259 DLHSNQLKEYCVEACQLR---------------------------LSVLDLSNNSLSGLP 291
             H NQ+        +LR                           +  L L  NSLS LP
Sbjct: 339 YAHGNQISHLPESIWELRNLTTMWISRNSLVTVSINNGTIRNCSQIQDLQLHKNSLSYLP 398

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSL----------------------VNG--------- 320
            +IG +  L+KL ++GN  ++L SS+                      + G         
Sbjct: 399 EDIGSLHGLKKLSVSGNLFKSLPSSIGHLTWLTRLYAHDNQITLLPESIGGLQDLKTMWV 458

Query: 321 ------PTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
                   P  + +L      R+ +N  S    +  DL  + T  +  +K        L+
Sbjct: 459 QENSLVSIPHNIGHLHQLEDLRIHKNNLSSLPDSVGDLTNLTTLWASNNK--------LT 510

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +IP  + E  E+  L L  NS+  LP  +   + L+ 
Sbjct: 511 SIPDSVCELHELQHLQLDTNSLTFLPTNIGKISWLKT 547



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 134/276 (48%), Gaps = 6/276 (2%)

Query: 42  WEAVDLQKLILAHNNIEKLKED---LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           WE  +L  + ++ N++  +  +   +RN   +  L +  N LS LP  IG LH LK L V
Sbjct: 353 WELRNLTTMWISRNSLVTVSINNGTIRNCSQIQDLQLHKNSLSYLPEDIGSLHGLKKLSV 412

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N    +P  IG  T L +     NQ+  LP S+G   +L       N + S+P ++  
Sbjct: 413 SGNLFKSLPSSIGHLTWLTRLYAHDNQITLLPESIGGLQDLKTMWVQENSLVSIPHNIGH 472

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             ++  L +  N L+ L ++ +   T LT L AS N L  +P+++  L  L  L L  N 
Sbjct: 473 LHQLEDLRIHKNNLSSLPDS-VGDLTNLTTLWASNNKLTSIPDSVCELHELQHLQLDTNS 531

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           +  +P++I     L    + NN+L+ LP  +G L  L  L + +NQL +      +L+ L
Sbjct: 532 LTFLPTNIGKISWLKTLCVNNNSLTTLPDRIGNLHTLEKLHVANNQLSQLPESIRKLKNL 591

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           + L +S N+L  + P +  +  L +     N L++L
Sbjct: 592 TTLVVSKNALVSM-PNMSYLHKLEQFRFENNELQSL 626



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 162/333 (48%), Gaps = 27/333 (8%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           + ++D+  N I K+P  I +   L     +SN+L  LP S+ +  NLS      N + +L
Sbjct: 54  VHNVDLKKNRIAKLPPSISTLKQLRMLHMNSNRLTSLPGSICKLRNLSTLCLERNSLKTL 113

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P  + +  ++ +L +  N+++ L    I     L   + SKN L  +P++IG L++L   
Sbjct: 114 PNSICNLQQLERLYLNNNQISHLP-ECIGKLRNLETFLISKNSLVSIPDSIGDLNKLQDF 172

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE- 271
             H+N++ S+P SI    +L + ++  N+L+++P  +  L+KL  L LH+N L  Y  + 
Sbjct: 173 QAHRNKLSSLPESIGKLQNLTKLWVSRNSLTSIPDSICDLNKLQDLRLHTNNL-SYLPDR 231

Query: 272 -----ACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
                 C L +L  L L  N++  LP  IG++  LRKL ++ N L  L  S+ +      
Sbjct: 232 IVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLRMSSNSLTRLPHSICD------ 285

Query: 326 LKYLRSRLPENEDSEASTTK-EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
                  L + ED +    K   L +   +L    K LS+ G ++  +P  I +  ++T+
Sbjct: 286 -------LNKLEDLQLHMNKLSSLPSQIGKLKHV-KNLSISGNSIKILPDSIGDLQQLTR 337

Query: 385 LDLSRNSIQELPP---ELSSCASLQVKFSDLVT 414
           L    N I  LP    EL +  ++ +  + LVT
Sbjct: 338 LYAHGNQISHLPESIWELRNLTTMWISRNSLVT 370



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 140/283 (49%), Gaps = 32/283 (11%)

Query: 21   LRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL 80
            L++ P ++ +NF            VDLQ      N +  L ED+     L  LN+++NKL
Sbjct: 834  LKEFPEKLLENFQRV-------RKVDLQS-----NYLTTLPEDINYSQKLYYLNINNNKL 881

Query: 81   SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
              LP ++ EL  LK L    N +  +PD  G  + L   + S+N++K LP S+G+  NL+
Sbjct: 882  KCLPESLCELTNLKQLLAKNNELDTLPDNFGELSKLEYLNISNNKVKSLPESIGKLENLT 941

Query: 141  DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               A+NN I+ LP    D  K+ KL      L + +NN     +  +E I++      +P
Sbjct: 942  QLCANNNSISELP----DIRKLKKLTA----LYLGNNNKTRPNSKFSECISN------LP 987

Query: 201  ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             T+ +L       +  N + S+P SIS   +L E  +  N L +LP E+GKL  L  L +
Sbjct: 988  ITLKTLW------MFGNSLTSLPESISTLRNLEELMIQENKLESLPDEIGKLGSLTKLWV 1041

Query: 261  HSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
            H+N LK     +   +L  L L++N L  LP  IG + +LR +
Sbjct: 1042 HNNLLKSLPDISSLKQLQDLSLTDNKLEKLPEGIGNLKSLRSI 1084



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 30/240 (12%)

Query: 80   LSELPAAIGE-LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLN 138
            L E P  + E    ++ +D+  N +  +P++I  +  L   + ++N+LK LP SL    N
Sbjct: 834  LKEFPEKLLENFQRVRKVDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLPESLCELTN 893

Query: 139  LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
            L    A NN + +LP++  + SK+  L++  NK+  L  + I     LT+L A+ N ++ 
Sbjct: 894  LKQLLAKNNELDTLPDNFGELSKLEYLNISNNKVKSLPES-IGKLENLTQLCANNNSISE 952

Query: 199  MPETIGSLSRLIRLDLHQNRILSIPSSISGCCS-----LAEFYMGNNALSALPAELGKLS 253
            +P+ I  L +L  L L  N      S  S C S     L   +M  N+L++LP  +  L 
Sbjct: 953  LPD-IRKLKKLTALYLGNNNKTRPNSKFSECISNLPITLKTLWMFGNSLTSLPESISTLR 1011

Query: 254  KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
             L  L +  N+L+                       LP EIGK+ +L KL +  N L++L
Sbjct: 1012 NLEELMIQENKLE----------------------SLPDEIGKLGSLTKLWVHNNLLKSL 1049



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 25/215 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           DL+ + +  N++  +  ++ +L  L  L +  N LS LP ++G+L  L +L  S N +  
Sbjct: 452 DLKTMWVQENSLVSIPHNIGHLHQLEDLRIHKNNLSSLPDSVGDLTNLTTLWASNNKLTS 511

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IPD +     L      +N L  LP+++G+   L     +NN +T+LP+ + +   + KL
Sbjct: 512 IPDSVCELHELQHLQLDTNSLTFLPTNIGKISWLKTLCVNNNSLTTLPDRIGNLHTLEKL 571

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V  N+L+ L                        PE+I  L  L  L + +N ++S+P +
Sbjct: 572 HVANNQLSQL------------------------PESIRKLKNLTTLVVSKNALVSMP-N 606

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           +S    L +F   NN L +LP  +  L  L T+  
Sbjct: 607 MSYLHKLEQFRFENNELQSLPRGIDTLRHLHTIKF 641



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 23/266 (8%)

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
            G  L+     L+ ++T +  +   KN +  +P +I +L +L  L ++ NR+ S+P SI 
Sbjct: 36  RGCGLSTFPGILLTTYTCVHNVDLKKNRIAKLPPSISTLKQLRMLHMNSNRLTSLPGSIC 95

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNS 286
              +L+   +  N+L  LP  +  L +L  L L++NQ+        +LR L    +S NS
Sbjct: 96  KLRNLSTLCLERNSLKTLPNSICNLQQLERLYLNNNQISHLPECIGKLRNLETFLISKNS 155

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR-----LPE-----N 336
           L  +P  IG +  L+      N L +L  S+  G    L K   SR     +P+     N
Sbjct: 156 LVSIPDSIGDLNKLQDFQAHRNKLSSLPESI--GKLQNLTKLWVSRNSLTSIPDSICDLN 213

Query: 337 EDSEASTTKEDLITMATRLSVTS-------KELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           +  +      +L  +  R+   S        +L L G N+  +P  I +   + KL +S 
Sbjct: 214 KLQDLRLHTNNLSYLPDRIVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLRMSS 273

Query: 390 NSIQELPP---ELSSCASLQVKFSDL 412
           NS+  LP    +L+    LQ+  + L
Sbjct: 274 NSLTRLPHSICDLNKLEDLQLHMNKL 299



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 100/220 (45%), Gaps = 11/220 (5%)

Query: 188  ELIASKNLLNGMPETI-GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
            E IA K+ L   PE +  +  R+ ++DL  N + ++P  I+    L    + NN L  LP
Sbjct: 826  EYIAVKSDLKEFPEKLLENFQRVRKVDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLP 885

Query: 247  AELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
              L +L+ L  L   +N+L        +L +L  L++SNN +  LP  IGK+  L +L  
Sbjct: 886  ESLCELTNLKQLLAKNNELDTLPDNFGELSKLEYLNISNNKVKSLPESIGKLENLTQLCA 945

Query: 306  TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
              N +  L       P    LK L +    N +     +K       + L +T K L + 
Sbjct: 946  NNNSISEL-------PDIRKLKKLTALYLGNNNKTRPNSK--FSECISNLPITLKTLWMF 996

Query: 366  GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            G +L+++P  I     + +L +  N ++ LP E+    SL
Sbjct: 997  GNSLTSLPESISTLRNLEELMIQENKLESLPDEIGKLGSL 1036


>gi|38173753|gb|AAH60689.1| Scrib protein [Mus musculus]
          Length = 929

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 166/365 (45%), Gaps = 61/365 (16%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + +R+   L L    LR++P   ++              ++L+KL L+ N I++L 
Sbjct: 29  EEIYRYSRSLEELLLDANQLRELPKPFFR-------------LLNLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++PD      +L     
Sbjct: 76  PEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLAL 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN---- 177
           +   L+ LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL +    
Sbjct: 136 NDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGA 195

Query: 178 --NLIASWTMLTELIA---------------------------------------SKNLL 196
             NL   W    +L A                                       S+NLL
Sbjct: 196 LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLL 255

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +PE IG L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL 
Sbjct: 256 QRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLT 315

Query: 257 TLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            L++  N L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L 
Sbjct: 316 NLNVDRNHLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLP 374

Query: 315 SSLVN 319
            +L +
Sbjct: 375 FALTH 379



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPH 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 126/242 (52%), Gaps = 1/242 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L  L L  N ++ L   L  L  L  L++  N L  LP  +G L  L+ L +  N + 
Sbjct: 151 ANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLS 210

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+G+   LV  D S N+L+ELP  LG    L+D   S N +  LPE +    ++S 
Sbjct: 211 ALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSI 270

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+L  ++   I     L+ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 271 LKVDQNRLCEVTE-AIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 NS 286
           N 
Sbjct: 390 NQ 391


>gi|291396405|ref|XP_002714440.1| PREDICTED: leucine rich repeat containing 1 [Oryctolagus cuniculus]
          Length = 614

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 242 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSE 301

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N +  +P+ +    K+S L
Sbjct: 302 LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPDGIGKLKKLSIL 361

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V+ N+LT L    +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 362 KVDQNRLTQLPEA-VGECESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 420

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +PAE+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 421 IGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTTLKLKALWLSDN 480

Query: 286 S 286
            
Sbjct: 481 Q 481



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 145/322 (45%), Gaps = 59/322 (18%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           ++ELP +  EL  L  L V+  S+  +P+ IG+   L   +   N L  LP SL +   L
Sbjct: 207 MTELPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 266

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
            +    NN I +LPE +     +  L ++GN+L+ L                        
Sbjct: 267 EELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSEL------------------------ 302

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N L  +P  +GKL KL    
Sbjct: 303 PQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPDGIGKLKKL---- 358

Query: 260 LHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
                             S+L +  N L+ LP  +G+  +L +L+LT N L TL  S+  
Sbjct: 359 ------------------SILKVDQNRLTQLPEAVGECESLTELVLTENRLLTLPKSI-- 398

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                 LK L S L  + +   S  KE  I     L+V      +    L+ IP+E+ +A
Sbjct: 399 ----GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV----FCVRDNRLTRIPAEVSQA 447

Query: 380 GEITKLDLSRNSIQELPPELSS 401
            E+  LD++ N +  LP  L++
Sbjct: 448 TELHVLDVAGNRLLHLPLSLTT 469



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 170/374 (45%), Gaps = 50/374 (13%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           ++++ V L+KL L+ N I++L  ++ N   L  L+VS N      +A+  +  ++S   +
Sbjct: 100 QFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNV-----SAVKAIFCVRSSGAA 154

Query: 100 FNSIMKIPDEIGSATALVK----FDCSSNQLKELPSSLGRCLNLS-DFKASNN-CITSLP 153
              ++  P  +   TAL++    ++   + L++    LG  +N+  D   SN+  +T LP
Sbjct: 155 AARLVVCP--LVKRTALMQPRAGYEYPIHGLQK-SLCLGFIVNVQPDLIYSNSEMMTELP 211

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           E   +   ++ L V    L  L  N I +   L  L   +NLL  +P+++  L RL  LD
Sbjct: 212 ESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENLLTYLPDSLTQLRRLEELD 270

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L  N I ++P SI     L + ++  N LS LP E+G L  L             C    
Sbjct: 271 LGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNL------------LC---- 314

Query: 274 QLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
                 LD+S N L  LP EI  +T+L  L+++ N L  +   +      ++LK  ++RL
Sbjct: 315 ------LDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPDGIGKLKKLSILKVDQNRL 368

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
              +  EA    E L            EL L    L  +P  I +  +++ L+  RN + 
Sbjct: 369 --TQLPEAVGECESL-----------TELVLTENRLLTLPKSIGKLKKLSNLNADRNKLV 415

Query: 394 ELPPELSSCASLQV 407
            LP E+  C SL V
Sbjct: 416 SLPKEIGGCCSLTV 429


>gi|291234857|ref|XP_002737364.1| PREDICTED: leucine rich repeat containing 7-like, partial
           [Saccoglossus kowalevskii]
          Length = 1578

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 173/388 (44%), Gaps = 53/388 (13%)

Query: 24  VPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSEL 83
           VP E+Y+ F+++           L++L L  NNI+ L   L +   L  L  S N+L  L
Sbjct: 307 VPEEIYE-FEKS-----------LEELYLDSNNIKDLPRPLFHCHNLRKLGASDNELCVL 354

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P AI  L  L+ LD+S N IM +PD I     L   + S N + +LP    + LNL+   
Sbjct: 355 PPAIASLVNLEELDISKNGIMDLPDNIKCCKTLNMVELSVNPIGKLPDGFTQLLNLTHLY 414

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN--NLIASWTMLTELIASKNLLNGMPE 201
            ++  +  LP +     K+  L++  N L  L     ++ +   LTEL    N L+ +P 
Sbjct: 415 LNDTFLDYLPANFGRLVKLKILEIRENHLKSLPKYPEVVGTLVNLTELWVDSNTLSKIPS 474

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            IG+L RL   D  +N+I S+P  + G  SL + ++  N L  LP  +GKLSKL TL + 
Sbjct: 475 FIGNLKRLQYFDGSKNKIESLPPEVDGLESLTDMHLSTNCLKLLPESIGKLSKLSTLKVD 534

Query: 262 SNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            NQL    Y +    + +  L L+ N L  LPP IG +  +R L +  N L  L S L  
Sbjct: 535 DNQLSMLPYSI-GGMISMEELILNMNDLQELPPSIGLLRNIRHLNVDDNLLFDLPSEL-- 591

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                   ++R                               LSL G  L  +P E+   
Sbjct: 592 ----GSCSHIRL------------------------------LSLRGNKLEVLPDELGRI 617

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQV 407
             +T ++LS N ++ LP       +LQ 
Sbjct: 618 SRLTVVNLSNNRLKYLPFNFCKLKNLQA 645



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 130/251 (51%), Gaps = 5/251 (1%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA---AIGELHMLKS 95
           D + + ++L  L L    ++ L  +   L  L +L +  N L  LP     +G L  L  
Sbjct: 402 DGFTQLLNLTHLYLNDTFLDYLPANFGRLVKLKILEIRENHLKSLPKYPEVVGTLVNLTE 461

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           L V  N++ KIP  IG+   L  FD S N+++ LP  +    +L+D   S NC+  LPE 
Sbjct: 462 LWVDSNTLSKIPSFIGNLKRLQYFDGSKNKIESLPPEVDGLESLTDMHLSTNCLKLLPES 521

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           +   SK+S L V+ N+L++L  + I     + ELI + N L  +P +IG L  +  L++ 
Sbjct: 522 IGKLSKLSTLKVDDNQLSMLPYS-IGGMISMEELILNMNDLQELPPSIGLLRNIRHLNVD 580

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N +  +PS +  C  +    +  N L  LP ELG++S+L  ++L +N+LK      C+L
Sbjct: 581 DNLLFDLPSELGSCSHIRLLSLRGNKLEVLPDELGRISRLTVVNLSNNRLKYLPFNFCKL 640

Query: 276 R-LSVLDLSNN 285
           + L  L LS+N
Sbjct: 641 KNLQALWLSDN 651



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 24/199 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N IE L  ++  L  LT +++S N L  LP +IG+L  L +L V  N +  +
Sbjct: 482 LQYFDGSKNKIESLPPEVDGLESLTDMHLSTNCLKLLPESIGKLSKLSTLKVDDNQLSML 541

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG   ++ +   + N L+ELP S+G   N+      +N +  LP +L  CS +  L 
Sbjct: 542 PYSIGGMISMEELILNMNDLQELPPSIGLLRNIRHLNVDDNLLFDLPSELGSCSHIRLLS 601

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GNKL VL                        P+ +G +SRL  ++L  NR+  +P + 
Sbjct: 602 LRGNKLEVL------------------------PDELGRISRLTVVNLSNNRLKYLPFNF 637

Query: 227 SGCCSLAEFYMGNNALSAL 245
               +L   ++ +N    L
Sbjct: 638 CKLKNLQALWLSDNQSKPL 656


>gi|403303038|ref|XP_003942154.1| PREDICTED: protein scribble homolog [Saimiri boliviensis
           boliviensis]
          Length = 1730

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 170/358 (47%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 95  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 154

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 155 QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 214

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 215 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 274

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 275 WLDRNQLSALPPELGSLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 334

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 335 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 394

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           QL+E   E   C + LSVL L +N L+ LPPE+   + L  L + GN L++L  +L +
Sbjct: 395 QLEELPPEIGGC-VALSVLSLRDNRLAVLPPELAHTSELHVLDVAGNRLQSLPFALTH 451



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 160/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 118 NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 177

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 178 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 234

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 235 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGSLRRL 294

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 295 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 340

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 341 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 378

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ELPPE+  C +L V
Sbjct: 379 SLGKLTKLTNLNVDRNQLEELPPEIGGCVALSV 411



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 246 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGSLRRLVCLDVSENRLE 305

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 306 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 364

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N++  +P 
Sbjct: 365 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNQLEELPP 401

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   S+L  LD+  N+L+        L L  L L+ 
Sbjct: 402 EIGGCVALSVLSLRDNRLAVLPPELAHTSELHVLDVAGNRLQSLPFALTHLNLKALWLAE 461

Query: 285 N 285
           N
Sbjct: 462 N 462


>gi|354483191|ref|XP_003503778.1| PREDICTED: leucine-rich repeat-containing protein 1-like
           [Cricetulus griseus]
          Length = 526

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 163/332 (49%), Gaps = 17/332 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +
Sbjct: 107 LQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYL 166

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +     L + D  +N++  LP S+G  L+L D     N ++ LP+++ +   +  LD
Sbjct: 167 PDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKSLLCLD 226

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N+L  L    I+  T LT+L+ S+NLL  +P+ IG L +L  L L QNR+  +P +I
Sbjct: 227 VSENRLERLPEE-ISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKLDQNRLTQLPEAI 285

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL---RLSVLDLS 283
             C +L E  +  N L  LP  +GKL KL  L+   N+L     E   L    L+V  + 
Sbjct: 286 GDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEVADLGCCSLTVFCVR 345

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+ +P E+ +   L  L + GN LR L  SL      AL       L +N+      
Sbjct: 346 NNRLTRIPSEVSQAMELHVLDVAGNRLRHLPLSLTTLKLKALW------LSDNQ------ 393

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
             + L+T  T    T+ E  L  + L  +PSE
Sbjct: 394 -SQPLLTFQTDTDHTTGEKILTCVLLPQMPSE 424



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 163/351 (46%), Gaps = 42/351 (11%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQVADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKSL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-------------------------SNNSLSGL 290
             LD+  N+L+    E   L  S+ DL                           N L+ L
Sbjct: 223 LCLDVSENRLERLPEEISGLT-SLTDLVISQNLLETIPDGIGKLKKLSILKLDQNRLTQL 281

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P  IG    L +L+LT N L TL  S+        LK L S L  + +   S  KE    
Sbjct: 282 PEAIGDCENLTELVLTENRLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKEVADL 334

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
               L+V      +    L+ IPSE+ +A E+  LD++ N ++ LP  L++
Sbjct: 335 GCCSLTV----FCVRNNRLTRIPSEVSQAMELHVLDVAGNRLRHLPLSLTT 381



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 138/243 (56%), Gaps = 3/243 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+  +L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+LT L    I     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 272 KLDQNRLTQLP-EAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 330

Query: 226 IS--GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
           ++  GCCSL  F + NN L+ +P+E+ +  +L  LD+  N+L+   +    L+L  L LS
Sbjct: 331 VADLGCCSLTVFCVRNNRLTRIPSEVSQAMELHVLDVAGNRLRHLPLSLTTLKLKALWLS 390

Query: 284 NNS 286
           +N 
Sbjct: 391 DNQ 393



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 158 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 204

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 205 DGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 252


>gi|424841835|ref|ZP_18266460.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395320033|gb|EJF52954.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 509

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 203/415 (48%), Gaps = 31/415 (7%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE 62
           ++L   R    L+LSN  L ++  E+             WE  +L +L L +N +++L  
Sbjct: 79  KVLFQLRKLNWLDLSNNGLSELGEELAA-----------WE--ELMRLDLKNNQLQELPN 125

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           +   L  L  L +  N+LS LPA+ G+L  L+ LD+S N+  ++P+EIG   AL +   S
Sbjct: 126 NFGQLKALRKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQLPEEIGQLKALKQLSIS 185

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           +N + +L   LG+  NL + +A    +  +PE++   + +  L +  N+L  L+ NL  S
Sbjct: 186 ANPMPQLAKVLGQLSNLEELQAEGLGLEEVPEEIGQLNNLQSLFLGYNRLKSLAANL-GS 244

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
            + L +L    N L  +P  +    +L  L+L  N +  +P  +    +L E  M N  L
Sbjct: 245 CSALEQLDLGNNRLEKLPLNLARCQQLKVLNLEDNPLGELPLFLQEIQALEELDMSNCNL 304

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
             L A L  L  L  LDL +NQL++      QL  LS LDL +N L   P  + +++ +R
Sbjct: 305 VNLGAGLS-LPALHWLDLSANQLRDLPSNFGQLTALSWLDLRDNQLQKWPKALEELSQIR 363

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +LLL GN LR +  S ++ P    L      L +NE +E S   + L  +        ++
Sbjct: 364 QLLLAGNFLRQINLSELDWPELEELD-----LSKNELTELSGQWDKLPQL--------RQ 410

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           L+LE   L+ +P +      + +LDLS N +  LP  L      Q+++ DL  N+
Sbjct: 411 LNLEKNQLAQLPEDWQPLSNLEELDLSDNQLDSLPQSLGKLD--QIQWLDLRNNQ 463



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 131/244 (53%), Gaps = 4/244 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L +N +EKL  +L     L VLN+  N L ELP  + E+  L+ LD+S  +++ +
Sbjct: 248 LEQLDLGNNRLEKLPLNLARCQQLKVLNLEDNPLGELPLFLQEIQALEELDMSNCNLVNL 307

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
              + S  AL   D S+NQL++LPS+ G+   LS     +N +   P+ L + S++ +L 
Sbjct: 308 GAGL-SLPALHWLDLSANQLRDLPSNFGQLTALSWLDLRDNQLQKWPKALEELSQIRQLL 366

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN L  ++ + +  W  L EL  SKN L  +      L +L +L+L +N++  +P   
Sbjct: 367 LAGNFLRQINLSEL-DWPELEELDLSKNELTELSGQWDKLPQLRQLNLEKNQLAQLPEDW 425

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSN 284
               +L E  + +N L +LP  LGKL ++  LDL +NQ  E+      L  +L  L LS 
Sbjct: 426 QPLSNLEELDLSDNQLDSLPQSLGKLDQIQWLDLRNNQFTEFPQALLPLVGQLQALYLSE 485

Query: 285 NSLS 288
           N+ S
Sbjct: 486 NNWS 489



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 133/296 (44%), Gaps = 26/296 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L ++ N + +L + L  L  L  L      L E+P  IG+L+ L+SL + +N +  +
Sbjct: 179 LKQLSISANPMPQLAKVLGQLSNLEELQAEGLGLEEVPEEIGQLNNLQSLFLGYNRLKSL 238

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
              +GS +AL + D  +N+L++LP +L RC  L      +N +  LP  L +   + +LD
Sbjct: 239 AANLGSCSALEQLDLGNNRLEKLPLNLARCQQLKVLNLEDNPLGELPLFLQEIQALEELD 298

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +    L  L   L  S   L  L  S N L  +P   G L+ L  LDL  N++   P ++
Sbjct: 299 MSNCNLVNLGAGL--SLPALHWLDLSANQLRDLPSNFGQLTALSWLDLRDNQLQKWPKAL 356

Query: 227 SGCCS-----------------------LAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
                                       L E  +  N L+ L  +  KL +L  L+L  N
Sbjct: 357 EELSQIRQLLLAGNFLRQINLSELDWPELEELDLSKNELTELSGQWDKLPQLRQLNLEKN 416

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           QL +   +   L  L  LDLS+N L  LP  +GK+  ++ L L  N       +L+
Sbjct: 417 QLAQLPEDWQPLSNLEELDLSDNQLDSLPQSLGKLDQIQWLDLRNNQFTEFPQALL 472



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 132/298 (44%), Gaps = 59/298 (19%)

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           E+ +  +L K D S   L+ELP  +GR   +      +N +  LP+ LA+  ++  LD+ 
Sbjct: 11  ELLAQKSLKKLDASRKGLQELPREIGRSKGMKQLNIEDNRLKDLPDSLANLGQLEWLDIS 70

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+L+ L   L      L  L  S N L+ + E + +   L+RLDL  N++  +P++   
Sbjct: 71  DNRLSPLPKVLFQL-RKLNWLDLSNNGLSELGEELAAWEELMRLDLKNNQLQELPNNFGQ 129

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLS 288
             +L +  +  N LSALPA  G+L +                      L  LDLS N+ +
Sbjct: 130 LKALRKLLLERNQLSALPASFGQLQQ----------------------LQQLDLSENAFT 167

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
            LP EIG++  L++L ++ NP+            P L K L                   
Sbjct: 168 QLPEEIGQLKALKQLSISANPM------------PQLAKVL------------------- 196

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                +LS   +EL  EG+ L  +P EI +   +  L L  N ++ L   L SC++L+
Sbjct: 197 ----GQLS-NLEELQAEGLGLEEVPEEIGQLNNLQSLFLGYNRLKSLAANLGSCSALE 249



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 18/157 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEA----------GEGDKWWEAVD----LQKLILAHNNIEK 59
           L+LS   LRD+P+    NF +            +  KW +A++    +++L+LA N + +
Sbjct: 319 LDLSANQLRDLPS----NFGQLTALSWLDLRDNQLQKWPKALEELSQIRQLLLAGNFLRQ 374

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           +     + P L  L++S N+L+EL     +L  L+ L++  N + ++P++    + L + 
Sbjct: 375 INLSELDWPELEELDLSKNELTELSGQWDKLPQLRQLNLEKNQLAQLPEDWQPLSNLEEL 434

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           D S NQL  LP SLG+   +      NN  T  P+ L
Sbjct: 435 DLSDNQLDSLPQSLGKLDQIQWLDLRNNQFTEFPQAL 471


>gi|359462332|ref|ZP_09250895.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 407

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 199/412 (48%), Gaps = 54/412 (13%)

Query: 2   DRILKAAR--TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEK 59
           +R++  AR   +  L+LS+  L D+P+ +                  L+ L L+ N + +
Sbjct: 11  ERLINIARLQEAAELDLSDIGLSDLPDSIGS-------------LSQLKSLYLSENELMR 57

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L + L  L  L VL+++ N+L  L   +G L  L+SLD++ N+++++P+ IG+ + L   
Sbjct: 58  LPKALGQLTQLQVLDLARNRLPILTDVLGYLSQLQSLDLTGNALVELPEFIGAFSQLRSL 117

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           + +SNQL  LPSS+G+  NL + + S N +   PE+L   + +  L++    L    N +
Sbjct: 118 NLASNQLVHLPSSIGKLKNLQELQLSYNSMAQWPEELGLLTGLRSLEITSTGL----NEI 173

Query: 180 IASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
             +W  L  L +   S N L  +PE +G+L+ L  LDL  N+                  
Sbjct: 174 PPAWRSLEGLESLNLSFNHLKTLPEWLGTLTDLRSLDLSFNQ------------------ 215

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
                LS LPA LG L+ L +LD+ SNQL+    + C L  L+ L   NN L+ LP   G
Sbjct: 216 -----LSELPAALGSLTPLTSLDIQSNQLQSLPPQICNLVNLTSLLAYNNQLTHLPEAWG 270

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           ++  L  L + GN +R L  S+  G    L +++ +  P+            +   A R 
Sbjct: 271 RLAALTTLGIAGNRIRQLPESI--GELQNLKQFIFNLDPD------QPVPLQVFPAALRG 322

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
               ++L+     L ++P  I E  ++  L++S N++ +LP  L +  +L+ 
Sbjct: 323 CRLLEQLTFVACELRSLPPWIGELTQLKSLNVSHNNLTDLPLSLGTLDNLKT 374



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 145/315 (46%), Gaps = 61/315 (19%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDE----AGEGDKWWEAVDL----QKLILAHNNIEKLKE 62
           SLNL++  L  +P+ +   KN  E         +W E + L    + L +    + ++  
Sbjct: 116 SLNLASNQLVHLPSSIGKLKNLQELQLSYNSMAQWPEELGLLTGLRSLEITSTGLNEIPP 175

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
             R+L  L  LN+S N L  LP  +G L  L+SLD+SFN + ++P  +GS T L   D  
Sbjct: 176 AWRSLEGLESLNLSFNHLKTLPEWLGTLTDLRSLDLSFNQLSELPAALGSLTPLTSLDIQ 235

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
           SNQL+ LP  +   +NL+   A NN +T LPE     + ++ L + GN++  L       
Sbjct: 236 SNQLQSLPPQICNLVNLTSLLAYNNQLTHLPEAWGRLAALTTLGIAGNRIRQL------- 288

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRL----IRLDLHQNRILSI-PSSISGCCSLAEFYM 237
                            PE+IG L  L      LD  Q   L + P+++ GC  L +   
Sbjct: 289 -----------------PESIGELQNLKQFIFNLDPDQPVPLQVFPAALRGCRLLEQLTF 331

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKM 297
               L +LP  +G+L++L +                      L++S+N+L+ LP  +G +
Sbjct: 332 VACELRSLPPWIGELTQLKS----------------------LNVSHNNLTDLPLSLGTL 369

Query: 298 TTLRKLLLTGNPLRT 312
             L+ L L+ NPLR+
Sbjct: 370 DNLKTLNLSNNPLRS 384



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 87/219 (39%), Gaps = 40/219 (18%)

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           I  L     LDL    +  +P SI     L   Y+  N L  LP  LG+L++L  LDL  
Sbjct: 16  IARLQEAAELDLSDIGLSDLPDSIGSLSQLKSLYLSENELMRLPKALGQLTQLQVLDLAR 75

Query: 263 NQLKEYC-VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L     V     +L  LDL+ N+L  LP  IG  + LR L L  N L  L SS+    
Sbjct: 76  NRLPILTDVLGYLSQLQSLDLTGNALVELPEFIGAFSQLRSLNLASNQLVHLPSSI---- 131

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
               LK L                              +EL L   +++  P E+     
Sbjct: 132 --GKLKNL------------------------------QELQLSYNSMAQWPEELGLLTG 159

Query: 382 ITKLDLSRNSIQELPP---ELSSCASLQVKFSDLVTNKE 417
           +  L+++   + E+PP    L    SL + F+ L T  E
Sbjct: 160 LRSLEITSTGLNEIPPAWRSLEGLESLNLSFNHLKTLPE 198


>gi|260836016|ref|XP_002613003.1| hypothetical protein BRAFLDRAFT_213228 [Branchiostoma floridae]
 gi|229298385|gb|EEN69012.1| hypothetical protein BRAFLDRAFT_213228 [Branchiostoma floridae]
          Length = 299

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 164/336 (48%), Gaps = 43/336 (12%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT+L++  NK+ ELP  IG+L  L +LDVS N +  +P EIG+   +   D   N+L +L
Sbjct: 2   LTMLSLRENKIRELPGGIGQLVNLINLDVSHNHLEHLPAEIGNCVQMSSLDLQHNELLDL 61

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P ++G    LS      N + S+P+ L++C++M + + EGN L+ L   L++S   ++ L
Sbjct: 62  PETIGNLKLLSRLGLRYNRLASVPKSLSNCTEMEEFNAEGNNLSSLPEGLLSSLVNMSSL 121

Query: 190 IASKNLLNGMPETIGS---LSRLIRLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSAL 245
             ++N  +  P  IG     + +  +++  N I  IP  I S    L +  M +N L++L
Sbjct: 122 TLARNNFSSYP--IGGPAQFATVYSINMEHNHINKIPFGIFSRAKYLTKLNMKDNQLTSL 179

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P ++G    +  L+L +NQL++   +   L  L  L LSNN L  LP  IG +  LR L 
Sbjct: 180 PLDVGTWENMVELNLGTNQLQKLPEDIQHLTNLETLILSNNLLKKLPRGIGNLRMLRVLD 239

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L +L         P  + YLR                DL     RL V S +   
Sbjct: 240 LEENRLESL---------PTEIAYLR----------------DL----NRLVVQSNQ--- 267

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
               L+ +P  I     +T L +  N++Q++P E+ 
Sbjct: 268 ----LTTMPRAIGHLTNLTYLGVGENNLQQIPEEIG 299



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 138/274 (50%), Gaps = 3/274 (1%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V+L  L ++HN++E L  ++ N   ++ L++ HN+L +LP  IG L +L  L + +N 
Sbjct: 21  QLVNLINLDVSHNHLEHLPAEIGNCVQMSSLDLQHNELLDLPETIGNLKLLSRLGLRYNR 80

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSS-LGRCLNLSDFKASNNCITSLP-EDLADCS 160
           +  +P  + + T + +F+   N L  LP   L   +N+S    + N  +S P    A  +
Sbjct: 81  LASVPKSLSNCTEMEEFNAEGNNLSSLPEGLLSSLVNMSSLTLARNNFSSYPIGGPAQFA 140

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            +  +++E N +  +   + +    LT+L    N L  +P  +G+   ++ L+L  N++ 
Sbjct: 141 TVYSINMEHNHINKIPFGIFSRAKYLTKLNMKDNQLTSLPLDVGTWENMVELNLGTNQLQ 200

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
            +P  I    +L    + NN L  LP  +G L  L  LDL  N+L+    E   LR L+ 
Sbjct: 201 KLPEDIQHLTNLETLILSNNLLKKLPRGIGNLRMLRVLDLEENRLESLPTEIAYLRDLNR 260

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L + +N L+ +P  IG +T L  L +  N L+ +
Sbjct: 261 LVVQSNQLTTMPRAIGHLTNLTYLGVGENNLQQI 294



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 13/154 (8%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I   A+    LN+ +  L  +P +V            W   V+L    L  N ++KL ED
Sbjct: 159 IFSRAKYLTKLNMKDNQLTSLPLDV----------GTWENMVELN---LGTNQLQKLPED 205

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +++L  L  L +S+N L +LP  IG L ML+ LD+  N +  +P EI     L +    S
Sbjct: 206 IQHLTNLETLILSNNLLKKLPRGIGNLRMLRVLDLEENRLESLPTEIAYLRDLNRLVVQS 265

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           NQL  +P ++G   NL+      N +  +PE++ 
Sbjct: 266 NQLTTMPRAIGHLTNLTYLGVGENNLQQIPEEIG 299



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 16/214 (7%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           +L  L L +N+I  +P  I    +L    + +N L  LPAE+G   ++ +LDL  N+L +
Sbjct: 1   KLTMLSLRENKIRELPGGIGQLVNLINLDVSHNHLEHLPAEIGNCVQMSSLDLQHNELLD 60

Query: 268 YCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR----SSLVNGPT 322
                  L+ LS L L  N L+ +P  +   T + +    GN L +L     SSLVN  +
Sbjct: 61  LPETIGNLKLLSRLGLRYNRLASVPKSLSNCTEMEEFNAEGNNLSSLPEGLLSSLVNMSS 120

Query: 323 PALLKYLRSRLPENEDSEASTT-----KEDLIT-----MATRLSVTSKELSLEGMNLSAI 372
             L +   S  P    ++ +T      + + I      + +R    +K L+++   L+++
Sbjct: 121 LTLARNNFSSYPIGGPAQFATVYSINMEHNHINKIPFGIFSRAKYLTK-LNMKDNQLTSL 179

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           P ++     + +L+L  N +Q+LP ++    +L+
Sbjct: 180 PLDVGTWENMVELNLGTNQLQKLPEDIQHLTNLE 213


>gi|169260661|gb|ACA52057.1| densin 11-N6 [Rattus norvegicus]
          Length = 533

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 155/324 (47%), Gaps = 37/324 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 32  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 80  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 139

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 140 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 199

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 200 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 258

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 259 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 318

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTL 313
           LPP IG + +LR L +  N L  L
Sbjct: 319 LPPTIGYLHSLRTLAVDENFLPEL 342



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 137/268 (51%), Gaps = 6/268 (2%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+ +  F  A  G      V L+ L L  N+++ L + +  L  L  L++ +N+ SELP 
Sbjct: 151 NDAFLEFLPANFG----RLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE 206

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            + ++  L+ L +  N++  +P  IG    LV  D S N+++ +   +  C  L D   S
Sbjct: 207 VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLS 266

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +N +  LP+ +    K++ L V+ N+LT+L N  I + ++L E   S N L  +P TIG 
Sbjct: 267 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGY 325

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  L  L + +N +  +P  I  C ++    + +N L  LP E+G++ +L  L+L  N+L
Sbjct: 326 LHSLRTLAVDENFLPELPREIGSCKNVTVTSLRSNKLEFLPEEIGQMQRLRVLNLSDNRL 385

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPP 292
           K       +L+ L+ L LS+N    L P
Sbjct: 386 KNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 120/320 (37%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 24  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 83

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 84  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 119

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L KL           
Sbjct: 120 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL----------- 168

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 169 -----------RILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 201

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE  D   +                 +EL ++   L  +P  I +   +  LD
Sbjct: 202 ----SELPEVLDQIQNL----------------RELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N I+ +  ++S C +L+
Sbjct: 242 MSKNRIETVDMDISGCEALE 261


>gi|149066144|gb|EDM16017.1| similar to PDZ-domain protein scribble (predicted), isoform CRA_a
           [Rattus norvegicus]
          Length = 1038

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 166/365 (45%), Gaps = 61/365 (16%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + +R+   L L    LR++P   ++              ++L+KL L+ N I++L 
Sbjct: 29  EEIYRYSRSLEELLLDANQLRELPKPFFR-------------LLNLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++PD      +L     
Sbjct: 76  PEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLAL 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN---- 177
           +   L+ LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL +    
Sbjct: 136 NDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGA 195

Query: 178 --NLIASWTMLTELIA---------------------------------------SKNLL 196
             NL   W    +L A                                       S+NLL
Sbjct: 196 LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLL 255

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +PE IG L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL 
Sbjct: 256 QRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLT 315

Query: 257 TLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            L++  N L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L 
Sbjct: 316 NLNVDRNHLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLP 374

Query: 315 SSLVN 319
            +L +
Sbjct: 375 FALTH 379



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 24/242 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 NS 286
           N 
Sbjct: 390 NQ 391


>gi|327282312|ref|XP_003225887.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Anolis
           carolinensis]
          Length = 1454

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 152/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N I   P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSSLPTSIASLVNLKELDISKNGIQDFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P  IG L +L+ LD+ +NRI SI   ISGC 
Sbjct: 195 EFSELP-EVLEQIQNLKELWMDNNALQTLPGPIGRLKQLVYLDVSKNRIESIDMDISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L +L TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LPP IG + +LR L +  N
Sbjct: 314 LPPTIGYLHSLRTLAVDEN 332



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 132/249 (53%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  LK L +  N++ 
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNALQ 220

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    +++ 
Sbjct: 221 TLPGPIGRLKQLVYLDVSKNRIESIDMDISGCEALEDLLLSSNMLQQLPDSIGLLKRLTT 280

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LTVL  N I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 281 LKVDDNQLTVLP-NAIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 339

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL  L+L  N+LK   +   +L+ L+ L LS
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPITFTKLKELAALWLS 399

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 400 DNQSKALIP 408



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 124/320 (38%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 19  GEEEIVSVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 79  NDLSSLPTS------------------------IASLVNLKELDISKNGIQDFPENIKCC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 115 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 160

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+T L +L L GN                  
Sbjct: 161 --------VKLRILELRENHLKTLPKSMHKLTQLERLDL-GN------------------ 193

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                    NE SE     E +  +        KEL ++   L  +P  I    ++  LD
Sbjct: 194 ---------NEFSELPEVLEQIQNL--------KELWMDNNALQTLPGPIGRLKQLVYLD 236

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N I+ +  ++S C +L+
Sbjct: 237 VSKNRIESIDMDISGCEALE 256


>gi|391331045|ref|XP_003739961.1| PREDICTED: protein LAP2-like [Metaseiulus occidentalis]
          Length = 544

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 145/297 (48%), Gaps = 26/297 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP---------------------- 84
           L  L L+ NNI ++ E +R   LL+ ++ S N +S+LP                      
Sbjct: 86  LTHLDLSRNNISEIPESIRGCKLLSSVDASVNPISKLPESFTQLVSLEELYLNDTLLEFL 145

Query: 85  -AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
            A +G L  L+ L++  N +  +P  +   T LV+ D   N   ++P  +G  ++L++  
Sbjct: 146 PANLGRLSKLRILELRENHLKALPKSMARLTQLVRLDIGQNDFVDMPEVVGSLVSLTELW 205

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
             +N ++ LP  L +  ++  LD   N+++ + +N   + T L +L  S N L   PETI
Sbjct: 206 CDSNRLSYLPGFLGNLQQLRYLDASNNRISCIEDNAFKNLTNLVDLTVSSNRLTRFPETI 265

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L++L  L    N++L +P S+  C  L E     N +  LP  +G L +L  L + SN
Sbjct: 266 GKLTKLTTLRADDNQLLGLPDSLGYCSLLEELIANGNHMEYLPGTIGLLRQLSLLMVDSN 325

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L E   E  +C   L +L   +N L  LP EIG ++ L+ L ++ N LR L ++L 
Sbjct: 326 WLDELPAEIGSCN-ELKILSARDNKLVDLPDEIGHLSNLKVLSVSANRLRYLPATLT 381



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 166/370 (44%), Gaps = 21/370 (5%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLP-LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           E  D+Q L  +H  ++++  ++ N    L  L +  N+L ELP  +   H L+ L    N
Sbjct: 12  ETEDIQALDYSHCTLDEVPNEIFNYERTLQELCLDANQLGELPRQLFYCHALRRLTFQDN 71

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P  I S T L   D S N + E+P S+  C  LS   AS N I+ LPE       
Sbjct: 72  DVQHLPAAISSLTQLTHLDLSRNNISEIPESIRGCKLLSSVDASVNPISKLPESFTQLVS 131

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           + +L +    L  L  NL    + L  L   +N L  +P+++  L++L+RLD+ QN  + 
Sbjct: 132 LEELYLNDTLLEFLPANL-GRLSKLRILELRENHLKALPKSMARLTQLVRLDIGQNDFVD 190

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR----L 277
           +P  +    SL E +  +N LS LP  LG L +L  LD  +N++   C+E    +    L
Sbjct: 191 MPEVVGSLVSLTELWCDSNRLSYLPGFLGNLQQLRYLDASNNRIS--CIEDNAFKNLTNL 248

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             L +S+N L+  P  IGK+T L  L    N L  L  SL           L   +    
Sbjct: 249 VDLTVSSNRLTRFPETIGKLTKLTTLRADDNQLLGLPDSL------GYCSLLEELIANGN 302

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
             E       L+   + L V S  L         +P+EI    E+  L    N + +LP 
Sbjct: 303 HMEYLPGTIGLLRQLSLLMVDSNWLD-------ELPAEIGSCNELKILSARDNKLVDLPD 355

Query: 398 ELSSCASLQV 407
           E+   ++L+V
Sbjct: 356 EIGHLSNLKV 365



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 61/249 (24%)

Query: 196 LNGMPETIGSLSRLIR-LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L+ +P  I +  R ++ L L  N++  +P  +  C +L      +N +  LPA +  L++
Sbjct: 26  LDEVPNEIFNYERTLQELCLDANQLGELPRQLFYCHALRRLTFQDNDVQHLPAAISSLTQ 85

Query: 255 LGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           L  LDL  N + E    +  C+L LS +D S N +S LP    ++ +L +L L       
Sbjct: 86  LTHLDLSRNNISEIPESIRGCKL-LSSVDASVNPISKLPESFTQLVSLEELYLND----- 139

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                       LL++L + L                    RLS   + L L   +L A+
Sbjct: 140 -----------TLLEFLPANL-------------------GRLSKL-RILELRENHLKAL 168

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASL---------------------QVKFSD 411
           P  +    ++ +LD+ +N   ++P  + S  SL                     Q+++ D
Sbjct: 169 PKSMARLTQLVRLDIGQNDFVDMPEVVGSLVSLTELWCDSNRLSYLPGFLGNLQQLRYLD 228

Query: 412 LVTNKESCI 420
              N+ SCI
Sbjct: 229 ASNNRISCI 237


>gi|417772084|ref|ZP_12419974.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680513|ref|ZP_13241762.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|418702821|ref|ZP_13263713.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|421115678|ref|ZP_15576078.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|400327871|gb|EJO80111.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409946041|gb|EKN96055.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|410012750|gb|EKO70841.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410767365|gb|EKR38040.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|455669508|gb|EMF34619.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 423

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 186/395 (47%), Gaps = 51/395 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS + L+ +PN++              +  +LQKL L  N    L +++  L  L  
Sbjct: 45  NLDLSFQGLKTLPNKI-------------GQLKNLQKLDLGGNEPTILSKEIWQLKDLQK 91

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +  +N+L  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +    +N + SLP ++     +  LD+  N+ T +S  ++   T L  L   
Sbjct: 152 IGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLET-LENLDLR 210

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N     P E+ +L
Sbjct: 211 SNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILEL 270

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  L++L L+GN + 
Sbjct: 271 KNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKIT 330

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L   ++       LK L                                LSL    L+A
Sbjct: 331 ILPKEILQ------LKNLEW------------------------------LSLSNNKLNA 354

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +P EI +  ++ +L+L  N +  LP E+    +LQ
Sbjct: 355 LPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQ 389



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 37/213 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                   P  ++ L+S                            K L L     + +  
Sbjct: 172 --------PTEIEQLKSL---------------------------KNLDLNNNEFTTVSK 196

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           E+     +  LDL  N ++ +P E+    SL+V
Sbjct: 197 EVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 65/120 (54%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N + +  +++  L  L  L++ HN+++ LP  + +L  L+ L +S N I  +P EI   
Sbjct: 280 YNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L     S+N+L  LP  +G+   L   +  NN +T+LP+++     + +L+++ N ++
Sbjct: 340 KNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|260793210|ref|XP_002591605.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
 gi|229276814|gb|EEN47616.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
          Length = 1573

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 187/421 (44%), Gaps = 59/421 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   LR +P E+         G+       L+ L L  N ++ L  ++R L  +  L
Sbjct: 212 LNLSYCKLRILPPEI---------GN----LTQLEWLDLCGNQLQTLPGEVRYLTNVKHL 258

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +    +  LP  +G L  L+ L +S N++  +P EIG  T +  FD S  +L+ LP  +
Sbjct: 259 YLHSCNMHTLPPEVGRLTQLQWLGLSSNNLQTLPSEIGQLTNIKHFDLSLCKLRTLPPEV 318

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           GR   L   + S N + +LP D+   + +  LD+   +LT+L    + + T L  L+  +
Sbjct: 319 GRLTQLEWLELSQNPLQTLPADIRQLTCLKHLDMSYCQLTLLPRE-VGALTQLECLVMIR 377

Query: 194 N-----------------------LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           N                        L  +P  IG L+ L  LDL  N +  +P ++    
Sbjct: 378 NPLQMLTTDVQHIINIESFNLSQCQLTTLPPEIGRLAHLRWLDLSYNPLQILPPNLGQLS 437

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           S+    + +  L  LP ELGKL+++  LDL  N L+    E  QL  +  LD+S   L  
Sbjct: 438 SIRHLDLSHCKLHTLPRELGKLTQIEWLDLSFNPLQVLLAEVGQLTNVKHLDMSECKLHS 497

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY----LRSRLPENEDSEASTTK 345
           +PPE+GK+T L  L L+ NPL+TL   +        L      LR+  PE          
Sbjct: 498 IPPEVGKLTQLEWLHLSSNPLKTLPPEVGQLANVTHLDMSECKLRTLPPE---------- 547

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                   RL    K L+L    L A+P++I +   I  LDLS   +  LPPE+     L
Sbjct: 548 ------VGRLE-QLKWLNLSSNPLQALPAQIGQLNNIQNLDLSSCELTTLPPEIGKLTQL 600

Query: 406 Q 406
           +
Sbjct: 601 E 601



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 195/407 (47%), Gaps = 30/407 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LS+ +L+ +P+E+              +  +++   L+   +  L  ++  L  L  L
Sbjct: 281 LGLSSNNLQTLPSEIG-------------QLTNIKHFDLSLCKLRTLPPEVGRLTQLEWL 327

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +S N L  LPA I +L  LK LD+S+  +  +P E+G+ T L       N L+ L + +
Sbjct: 328 ELSQNPLQTLPADIRQLTCLKHLDMSYCQLTLLPREVGALTQLECLVMIRNPLQMLTTDV 387

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
              +N+  F  S   +T+LP ++   + +  LD+  N L +L  NL    + +  L  S 
Sbjct: 388 QHIINIESFNLSQCQLTTLPPEIGRLAHLRWLDLSYNPLQILPPNL-GQLSSIRHLDLSH 446

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
             L+ +P  +G L+++  LDL  N +  + + +    ++    M    L ++P E+GKL+
Sbjct: 447 CKLHTLPRELGKLTQIEWLDLSFNPLQVLLAEVGQLTNVKHLDMSECKLHSIPPEVGKLT 506

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           +L  L L SN LK    E  QL  ++ LD+S   L  LPPE+G++  L+ L L+ NPL+ 
Sbjct: 507 QLEWLHLSSNPLKTLPPEVGQLANVTHLDMSECKLRTLPPEVGRLEQLKWLNLSSNPLQA 566

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L         PA +  L +    +  S   TT    I   T+L    + L++    L  +
Sbjct: 567 L---------PAQIGQLNNIQNLDLSSCELTTLPPEIGKLTQL----ERLNVSDNPLQTL 613

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPEL--SSCASLQVKFSDLVTNKE 417
           P+EI     I+ L +S  ++ + P E+     A+++  F +L  ++E
Sbjct: 614 PAEIVHLTNISHLKISTRTLSKPPAEVCRQGIATIRQYFEELERSEE 660



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 176/371 (47%), Gaps = 12/371 (3%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +++ L L+  N+  L  ++  L  L  L+V  N +  LPA +G+L  +K L++S+  +  
Sbjct: 162 NMEHLNLSKCNLHTLPLEIWRLIQLRWLDVRFNPIQMLPAGVGQLTNIKHLNLSYCKLRI 221

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+ T L   D   NQL+ LP  +    N+      +  + +LP ++   +++  L
Sbjct: 222 LPPEIGNLTQLEWLDLCGNQLQTLPGEVRYLTNVKHLYLHSCNMHTLPPEVGRLTQLQWL 281

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N L  L +  I   T +     S   L  +P  +G L++L  L+L QN + ++P+ 
Sbjct: 282 GLSSNNLQTLPSE-IGQLTNIKHFDLSLCKLRTLPPEVGRLTQLEWLELSQNPLQTLPAD 340

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSN 284
           I     L    M    L+ LP E+G L++L  L +  N L+    +    + +   +LS 
Sbjct: 341 IRQLTCLKHLDMSYCQLTLLPREVGALTQLECLVMIRNPLQMLTTDVQHIINIESFNLSQ 400

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENEDSEA 341
             L+ LPPEIG++  LR L L+ NPL+ L  +L    +   L     +   LP       
Sbjct: 401 CQLTTLPPEIGRLAHLRWLDLSYNPLQILPPNLGQLSSIRHLDLSHCKLHTLPRELGKLT 460

Query: 342 STTKEDL------ITMATRLSVTS-KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
                DL      + +A    +T+ K L +    L +IP E+ +  ++  L LS N ++ 
Sbjct: 461 QIEWLDLSFNPLQVLLAEVGQLTNVKHLDMSECKLHSIPPEVGKLTQLEWLHLSSNPLKT 520

Query: 395 LPPELSSCASL 405
           LPPE+   A++
Sbjct: 521 LPPEVGQLANV 531



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 201/435 (46%), Gaps = 62/435 (14%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDL--QKLILAHNNIEKLKEDLRNLPLL 70
           +L+ S   +  +P E+Y        G +  EA+DL  +K I   N + KL+        L
Sbjct: 27  TLDFSGHYVEQLPEELY--------GIEELEALDLTGKKGIKLPNELTKLQN-------L 71

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS------------------ 112
            VLN++   L+ +PA + +L  L++L +S N  + +PDE+                    
Sbjct: 72  KVLNLNDCNLTTVPAVVMKLPQLQTLILSNNENIILPDEMSGLTNIRVLKLNKTNMVTVP 131

Query: 113 -----ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
                 T L   +  SN L  L + +G   N+     S   + +LP ++    ++  LDV
Sbjct: 132 TVVWRLTHLHTLELGSNTLNVLNAEIGLLSNMEHLNLSKCNLHTLPLEIWRLIQLRWLDV 191

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
             N + +L    +   T +  L  S   L  +P  IG+L++L  LDL  N++ ++P  + 
Sbjct: 192 RFNPIQMLPAG-VGQLTNIKHLNLSYCKLRILPPEIGNLTQLEWLDLCGNQLQTLPGEVR 250

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNS 286
              ++   Y+ +  +  LP E+G+L++L  L L SN L+    E  QL  +   DLS   
Sbjct: 251 YLTNVKHLYLHSCNMHTLPPEVGRLTQLQWLGLSSNNLQTLPSEIGQLTNIKHFDLSLCK 310

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR------SRLPENEDSE 340
           L  LPPE+G++T L  L L+ NPL+TL + +        LK+L       + LP   +  
Sbjct: 311 LRTLPPEVGRLTQLEWLELSQNPLQTLPADIRQL---TCLKHLDMSYCQLTLLP--REVG 365

Query: 341 ASTTKEDLITMATRLSVTSKE----LSLEGMNLS-----AIPSEIWEAGEITKLDLSRNS 391
           A T  E L+ +   L + + +    +++E  NLS      +P EI     +  LDLS N 
Sbjct: 366 ALTQLECLVMIRNPLQMLTTDVQHIINIESFNLSQCQLTTLPPEIGRLAHLRWLDLSYNP 425

Query: 392 IQELPPELSSCASLQ 406
           +Q LPP L   +S++
Sbjct: 426 LQILPPNLGQLSSIR 440



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 122/262 (46%), Gaps = 14/262 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           S NLS   L  +P E+ +                L+ L L++N ++ L  +L  L  +  
Sbjct: 395 SFNLSQCQLTTLPPEIGR-------------LAHLRWLDLSYNPLQILPPNLGQLSSIRH 441

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++SH KL  LP  +G+L  ++ LD+SFN +  +  E+G  T +   D S  +L  +P  
Sbjct: 442 LDLSHCKLHTLPRELGKLTQIEWLDLSFNPLQVLLAEVGQLTNVKHLDMSECKLHSIPPE 501

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+   L     S+N + +LP ++   + ++ LD+   KL  L    +     L  L  S
Sbjct: 502 VGKLTQLEWLHLSSNPLKTLPPEVGQLANVTHLDMSECKLRTLPPE-VGRLEQLKWLNLS 560

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P  IG L+ +  LDL    + ++P  I     L    + +N L  LPAE+  L
Sbjct: 561 SNPLQALPAQIGQLNNIQNLDLSSCELTTLPPEIGKLTQLERLNVSDNPLQTLPAEIVHL 620

Query: 253 SKLGTLDLHSNQLKEYCVEACQ 274
           + +  L + +  L +   E C+
Sbjct: 621 TNISHLKISTRTLSKPPAEVCR 642


>gi|402912243|ref|XP_003918687.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1,
           partial [Papio anubis]
          Length = 1076

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 146/295 (49%), Gaps = 28/295 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSI 103
           D++ L L +N +E++ E L + L  L VL +  N+ + LP A+ EL H L  LDVS N +
Sbjct: 88  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 147

Query: 104 MKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
             +  E+ SA   L K + S NQL  LP+ LG   +L +   S N +T LP+ L+  S++
Sbjct: 148 TALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLTHLPDSLSCLSRL 207

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    + ++
Sbjct: 208 RTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTL 266

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------- 275
           P+      SL    + NN L ALPA+  +L +L  L+L SN L+E+      L       
Sbjct: 267 PAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELY 326

Query: 276 -----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                            RL  L L NN +  LP  I ++T L +L+L GN +  L
Sbjct: 327 LSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVL 381



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/280 (34%), Positives = 133/280 (47%), Gaps = 28/280 (10%)

Query: 66  NLPLLTVLNVSHNKLSE------------------------LPAAIGEL-HMLKSLDVSF 100
           NL  +  LN+ +N L E                        LP A+ EL H L  LDVS 
Sbjct: 85  NLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 144

Query: 101 NSIMKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           N +  +  E+ SA   L K + S NQL  LP+ LG   +L +   S N +T LP+ L+  
Sbjct: 145 NRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLTHLPDSLSCL 204

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           S++  LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    +
Sbjct: 205 SRLRTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALCALKILWLSGAEL 263

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
            ++P+      SL    + NN L ALPA+  +L +L  L+L SN L+E+      L  L 
Sbjct: 264 GTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLE 323

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L LS N L+ +P  I  +  L  L L  N +R L  S+V
Sbjct: 324 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIV 363



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 130/266 (48%), Gaps = 3/266 (1%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L +L ++HN +  L  E +  L  L  LN+SHN+L  LPA +G L  L+ LDVSFN +  
Sbjct: 137 LTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLTH 196

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PD +   + L   D   NQL   P  L + + L +   S+N +  LPED++    +  L
Sbjct: 197 LPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKIL 256

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            + G +L  L          L  L+   N L  +P     L RL  L+L  N +   P++
Sbjct: 257 WLSGAELGTLPAGF-CELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAA 315

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +     L E Y+  N L+++P+ +  L +L TL L +N+++       +L  L  L L  
Sbjct: 316 LLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQG 375

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N ++ LP   G+++ +    +  NPL
Sbjct: 376 NQIAVLPDNFGQLSRVGLWKIKDNPL 401



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 25/285 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL L+HN +  L   L  L  L  L+VS N+L+ LP ++  L  L++LDV  N +  
Sbjct: 160 ELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLTHLPDSLSCLSRLRTLDVDHNQLTA 219

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P ++    AL + D SSN+L+ LP  +     L     S   + +LP    + + +  L
Sbjct: 220 FPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELASLESL 279

Query: 166 DVEGNKLTV---------------LSNNLIASWTM-------LTELIASKNLLNGMPETI 203
            ++ N L                 LS+NL+  +         L EL  S+N L  +P  I
Sbjct: 280 MLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLI 339

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
             L RL+ L L  NRI  +P SI     L E  +  N ++ LP   G+LS++G   +  N
Sbjct: 340 SGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDN 399

Query: 264 QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            L +   E C   +  +      L+   P +       KLLL G+
Sbjct: 400 PLIQPPYEVCMKGIPYIAAYQKELAHSQPAVQPRL---KLLLMGH 441



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 140/310 (45%), Gaps = 51/310 (16%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPEDLADCSK-MS 163
           +P  +G   AL   +  +N L+E+P  LG  L +L       N    LP  +A+    ++
Sbjct: 82  LPANLGDIEAL---NLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLT 138

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +LDV  N+LT L   ++++   L +L  S N L  +P  +G+L+ L  LD+  NR+  +P
Sbjct: 139 ELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLTHLP 198

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
            S+S  C                     LS+L TLD+  NQL  +  +  QL  L  LD+
Sbjct: 199 DSLS--C---------------------LSRLRTLDVDHNQLTAFPRQLLQLVALEELDV 235

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           S+N L GLP +I  +  L+ L L+G  L TL +          L  L S + +N   +A 
Sbjct: 236 SSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCE------LASLESLMLDNNGLQAL 289

Query: 343 TTKEDLITMATRLSVTS----------------KELSLEGMNLSAIPSEIWEAGEITKLD 386
             +   +     L+++S                +EL L    L+++PS I   G +  L 
Sbjct: 290 PAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLW 349

Query: 387 LSRNSIQELP 396
           L  N I+ LP
Sbjct: 350 LDNNRIRYLP 359



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 1/182 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L ++ N +  L ED+  L  L +L +S  +L  LPA   EL  L+SL +  N + 
Sbjct: 228 VALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQ 287

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P +      L   + SSN L+E P++L     L +   S N +TS+P  ++   ++  
Sbjct: 288 ALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLT 347

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L ++ N++  L ++++   T L EL+   N +  +P+  G LSR+    +  N ++  P 
Sbjct: 348 LWLDNNRIRYLPDSIV-ELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPY 406

Query: 225 SI 226
            +
Sbjct: 407 EV 408



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 19/176 (10%)

Query: 237 MGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 293
           +GNN L  +P  LG  L  L  L L  N+         +L   L+ LD+S+N L+ L  E
Sbjct: 94  LGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAE 153

Query: 294 I-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITM 351
           +   +  LRKL L+ N L  L         PA L  L + L E + S    T   D ++ 
Sbjct: 154 VVSALRELRKLNLSHNQLPAL---------PAQLGAL-AHLEELDVSFNRLTHLPDSLSC 203

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +RL    + L ++   L+A P ++ +   + +LD+S N ++ LP ++S+  +L++
Sbjct: 204 LSRL----RTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKI 255


>gi|347963067|ref|XP_311104.5| AGAP000054-PA [Anopheles gambiae str. PEST]
 gi|333467375|gb|EAA06225.6| AGAP000054-PA [Anopheles gambiae str. PEST]
          Length = 1593

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 182/348 (52%), Gaps = 27/348 (7%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG--R 135
           N + +LP     L+ L+ L +S N I+KIP +I +   LV+ D S N++ ++P  +   R
Sbjct: 47  NHIRDLPKGFFRLYRLRKLGLSDNDIIKIPSDIQNFVNLVELDVSRNEIGDIPEDIKHLR 106

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG-NKLTVLSNNLIASWTMLTELIA--- 191
            L ++DF  S+N I+ LP   A  +++  L V G N ++++S  L   +  L++L++   
Sbjct: 107 SLQIADF--SSNPISRLP---AGFTQLRNLTVLGLNDMSLIS--LPQDFGCLSKLVSLEL 159

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
            +NLL  +PE+I  L++L RLDL  N I  +PS +    SL E ++ +N L  LP E+G 
Sbjct: 160 RENLLKNLPESISQLTKLERLDLGDNEIDELPSHVGYLPSLQELWLDHNQLLRLPPEIGL 219

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  LD+  N+L+E   E   L  L+ L LS N L  LP  I K+T L  L L  N L
Sbjct: 220 LKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNGISKLTNLSILKLDQNRL 279

Query: 311 RTLRSSL---VNGPTPALLKYLRSRLPENEDS-----EASTTKEDLITMATRLSVTSK-- 360
            TL  S+   V+     L +   S LP    +       +  +  L+ + + L    +  
Sbjct: 280 HTLNDSIGCCVHMQELILTENFLSELPATVGNMLVLNNLNVDRNSLVAVPSELGNCRQLG 339

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
            LSL    L+ +P+E+   GE+  LD+S N +Q LP    S  +LQ+K
Sbjct: 340 VLSLRENKLTRLPAELGNCGELHVLDVSGNLLQHLP---YSLVNLQLK 384



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 139/258 (53%), Gaps = 7/258 (2%)

Query: 47  LQKLI---LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           L KL+   L  N ++ L E +  L  L  L++  N++ ELP+ +G L  L+ L +  N +
Sbjct: 151 LSKLVSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHVGYLPSLQELWLDHNQL 210

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
           +++P EIG    LV  D S N+L+ELP  +G    L+D   S N + +LP  ++  + +S
Sbjct: 211 LRLPPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPNGISKLTNLS 270

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            L ++ N+L  L N+ I     + ELI ++N L+ +P T+G++  L  L++ +N ++++P
Sbjct: 271 ILKLDQNRLHTL-NDSIGCCVHMQELILTENFLSELPATVGNMLVLNNLNVDRNSLVAVP 329

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLS 283
           S +  C  L    +  N L+ LPAELG   +L  LD+  N L+        L+L  + LS
Sbjct: 330 SELGNCRQLGVLSLRENKLTRLPAELGNCGELHVLDVSGNLLQHLPYSLVNLQLKAVWLS 389

Query: 284 NNSLSGLP---PEIGKMT 298
            N    +P   P++ + T
Sbjct: 390 ENQSQPVPTFQPDVDETT 407



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 156/330 (47%), Gaps = 38/330 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LS+  +  +P+++ +NF            V+L +L ++ N I  + ED+++L  L + 
Sbjct: 65  LGLSDNDIIKIPSDI-QNF------------VNLVELDVSRNEIGDIPEDIKHLRSLQIA 111

Query: 74  NVSHNKLSELPAAIGELHMLK-----------------------SLDVSFNSIMKIPDEI 110
           + S N +S LPA   +L  L                        SL++  N +  +P+ I
Sbjct: 112 DFSSNPISRLPAGFTQLRNLTVLGLNDMSLISLPQDFGCLSKLVSLELRENLLKNLPESI 171

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
              T L + D   N++ ELPS +G   +L +    +N +  LP ++    K+  LDV  N
Sbjct: 172 SQLTKLERLDLGDNEIDELPSHVGYLPSLQELWLDHNQLLRLPPEIGLLKKLVCLDVSEN 231

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +L  L    I     LT+L  S+NLL  +P  I  L+ L  L L QNR+ ++  SI  C 
Sbjct: 232 RLEELPEE-IGGLECLTDLHLSQNLLETLPNGISKLTNLSILKLDQNRLHTLNDSIGCCV 290

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
            + E  +  N LS LPA +G +  L  L++  N L     E    R L VL L  N L+ 
Sbjct: 291 HMQELILTENFLSELPATVGNMLVLNNLNVDRNSLVAVPSELGNCRQLGVLSLRENKLTR 350

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           LP E+G    L  L ++GN L+ L  SLVN
Sbjct: 351 LPAELGNCGELHVLDVSGNLLQHLPYSLVN 380



 Score = 44.7 bits (104), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 79/223 (35%), Gaps = 62/223 (27%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N +  +P+    L RL +L L  N I+ IPS I    +L E  +  N +  +
Sbjct: 39  LEELLLDANHIRDLPKGFFRLYRLRKLGLSDNDIIKIPSDIQNFVNLVELDVSRNEIGDI 98

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           P ++  L  L                       + D S+N +S LP      T LR L +
Sbjct: 99  PEDIKHLRSL----------------------QIADFSSNPISRLP---AGFTQLRNLTV 133

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
            G                                        LI++       SK +SLE
Sbjct: 134 LG-----------------------------------LNDMSLISLPQDFGCLSKLVSLE 158

Query: 366 GMN--LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                L  +P  I +  ++ +LDL  N I ELP  +    SLQ
Sbjct: 159 LRENLLKNLPESISQLTKLERLDLGDNEIDELPSHVGYLPSLQ 201


>gi|392338593|ref|XP_003753576.1| PREDICTED: protein LAP2-like [Rattus norvegicus]
 gi|392345308|ref|XP_003749226.1| PREDICTED: protein LAP2-like [Rattus norvegicus]
          Length = 1430

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 14/312 (4%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN-NLIASWTMLTE 188
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L    ++   + L E
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKPEVLEQLSGLRE 190

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
                N L  +P  IGSL +L  LD+ +N I  +   IS C +L +F + +N+L  LP  
Sbjct: 191 FWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPET 250

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G L  + TL +  NQL         LR +  LD S N +  LP  IG++T +R      
Sbjct: 251 IGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNIRTFAADH 310

Query: 308 NPLRTLRSSLVN 319
           N L+ L   + N
Sbjct: 311 NYLQQLPPEIGN 322



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 156/352 (44%), Gaps = 45/352 (12%)

Query: 70  LTVLNVSHNKLSELPAAIGELH-MLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           +T L+ SH  L ++P  I      L+ L +  N I ++P ++ +  +L K     N L  
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP+S+   +NL +   S N I   PE++ +C  ++ ++   N ++ L +   +    LT+
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGF-SQLLNLTQ 142

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQN--RILSIPSSISGCCSLAEFYMGNNALSALP 246
           L  +   L  +P   G L++L  L+L +N  ++L  P  +     L EF+M  N L+ +P
Sbjct: 143 LYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKPEVLEQLSGLREFWMDGNRLTFIP 202

Query: 247 AELGKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
             +G L +L  LD+  N ++  E  +  C+  L    LS+NSL  LP  IG +  +  L 
Sbjct: 203 GFIGSLRQLTYLDVSKNNIEMVEEGISTCE-NLQDFLLSSNSLQQLPETIGSLKNVTTLK 261

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           +  N L  L         P  +  LRS                            +EL  
Sbjct: 262 IDENQLMYL---------PDSIGGLRS---------------------------IEELDC 285

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
               + A+PS I +   I       N +Q+LPPE+ +  ++ V F  L +NK
Sbjct: 286 SFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNVTVLF--LHSNK 335



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 24/199 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L ++ NNIE ++E +     L    +S N L +LP  IG L  + +L +  N +M +
Sbjct: 211 LTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYL 270

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IG   ++ + DCS N+++ LPSS+G+  N+  F A +N +  LP +           
Sbjct: 271 PDSIGGLRSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPE----------- 319

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                        I +W  +T L    N L  +PE +G + +L  ++L  NR+ ++P S 
Sbjct: 320 -------------IGNWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 366

Query: 227 SGCCSLAEFYMGNNALSAL 245
           +    L   ++ +N    L
Sbjct: 367 TKLQQLTAMWLSDNQSKPL 385



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 82/146 (56%), Gaps = 4/146 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ  +L+ N++++L E + +L  +T L +  N+L  LP +IG L  ++ LD SFN I  
Sbjct: 233 NLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEA 292

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG  T +  F    N L++LP  +G   N++     +N + +LPE++ D  K+  +
Sbjct: 293 LPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNVTVLFLHSNKLETLPEEMGDMQKLKVI 352

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIA 191
           ++  N+L     NL  S+T L +L A
Sbjct: 353 NLSDNRL----KNLPFSFTKLQQLTA 374


>gi|109085638|ref|XP_001090936.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Macaca mulatta]
          Length = 1052

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 145/295 (49%), Gaps = 28/295 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSI 103
           D++ L L +N +E++ E L + L  L VL +  N+ + LP A+ EL H L  LDVS N +
Sbjct: 64  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 104 MKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
             +  E+ SA   L K + S NQL  LP+ LG    L +   S N +T LP+ L+  S++
Sbjct: 124 TALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPDSLSCLSRL 183

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    + ++
Sbjct: 184 RTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTL 242

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------- 275
           P+      SL    + NN L ALPA+  +L +L  L+L SN L+E+      L       
Sbjct: 243 PAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELY 302

Query: 276 -----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                            RL  L L NN +  LP  I ++T L +L+L GN +  L
Sbjct: 303 LSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVL 357



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/280 (34%), Positives = 132/280 (47%), Gaps = 28/280 (10%)

Query: 66  NLPLLTVLNVSHNKLSE------------------------LPAAIGEL-HMLKSLDVSF 100
           NL  +  LN+ +N L E                        LP A+ EL H L  LDVS 
Sbjct: 61  NLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 120

Query: 101 NSIMKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           N +  +  E+ SA   L K + S NQL  LP+ LG    L +   S N +T LP+ L+  
Sbjct: 121 NRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPDSLSCL 180

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           S++  LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    +
Sbjct: 181 SRLRTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALCALKILWLSGAEL 239

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
            ++P+      SL    + NN L ALPA+  +L +L  L+L SN L+E+      L  L 
Sbjct: 240 GTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLE 299

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L LS N L+ +P  I  +  L  L L  N +R L  S+V
Sbjct: 300 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIV 339



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 130/267 (48%), Gaps = 3/267 (1%)

Query: 46  DLQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            L +L ++HN +  L  E +  L  L  LN+SHN+L  LPA +G L  L+ LDVSFN + 
Sbjct: 112 HLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLT 171

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PD +   + L   D   NQL   P  L + + L +   S+N +  LPED++    +  
Sbjct: 172 HLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKI 231

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L + G +L  L          L  L+   N L  +P     L RL  L+L  N +   P+
Sbjct: 232 LWLSGAELGTLPAGF-CELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPA 290

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
           ++     L E Y+  N L+++P+ +  L +L TL L +N+++       +L  L  L L 
Sbjct: 291 ALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQ 350

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            N ++ LP   G+++ +    +  NPL
Sbjct: 351 GNQIAVLPDNFGQLSRVGLWKIKDNPL 377



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 25/285 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL L+HN +  L   L  L  L  L+VS N+L+ LP ++  L  L++LDV  N +  
Sbjct: 136 ELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPDSLSCLSRLRTLDVDHNQLTA 195

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P ++    AL + D SSN+L+ LP  +     L     S   + +LP    + + +  L
Sbjct: 196 FPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELASLESL 255

Query: 166 DVEGNKLTV---------------LSNNLIASWTM-------LTELIASKNLLNGMPETI 203
            ++ N L                 LS+NL+  +         L EL  S+N L  +P  I
Sbjct: 256 MLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLI 315

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
             L RL+ L L  NRI  +P SI     L E  +  N ++ LP   G+LS++G   +  N
Sbjct: 316 SGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDN 375

Query: 264 QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            L +   E C   +  +      L+   P +       KLLL G+
Sbjct: 376 PLIQPPYEVCMKGIPYIAAYQKELAHSQPAVQPRL---KLLLMGH 417



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 141/310 (45%), Gaps = 51/310 (16%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPEDLADCSK-MS 163
           +P  +G   AL   +  +N L+E+P  LG  L +L       N    LP  +A+    ++
Sbjct: 58  LPANLGDIEAL---NLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLT 114

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +LDV  N+LT L   ++++   L +L  S N L  +P  +G+L++L  LD+  NR+  +P
Sbjct: 115 ELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLP 174

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
            S+S  C                     LS+L TLD+  NQL  +  +  QL  L  LD+
Sbjct: 175 DSLS--C---------------------LSRLRTLDVDHNQLTAFPRQLLQLVALEELDV 211

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           S+N L GLP +I  +  L+ L L+G  L TL +          L  L S + +N   +A 
Sbjct: 212 SSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCE------LASLESLMLDNNGLQAL 265

Query: 343 TTKEDLITMATRLSVTS----------------KELSLEGMNLSAIPSEIWEAGEITKLD 386
             +   +     L+++S                +EL L    L+++PS I   G +  L 
Sbjct: 266 PAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLW 325

Query: 387 LSRNSIQELP 396
           L  N I+ LP
Sbjct: 326 LDNNRIRYLP 335



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 1/182 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L ++ N +  L ED+  L  L +L +S  +L  LPA   EL  L+SL +  N + 
Sbjct: 204 VALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQ 263

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P +      L   + SSN L+E P++L     L +   S N +TS+P  ++   ++  
Sbjct: 264 ALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLT 323

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L ++ N++  L ++++   T L EL+   N +  +P+  G LSR+    +  N ++  P 
Sbjct: 324 LWLDNNRIRYLPDSIV-ELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPY 382

Query: 225 SI 226
            +
Sbjct: 383 EV 384



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 19/176 (10%)

Query: 237 MGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 293
           +GNN L  +P  LG  L  L  L L  N+         +L   L+ LD+S+N L+ L  E
Sbjct: 70  LGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAE 129

Query: 294 I-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITM 351
           +   +  LRKL L+ N L  L         PA L  L ++L E + S    T   D ++ 
Sbjct: 130 VVSALRELRKLNLSHNQLPAL---------PAQLGAL-AQLEELDVSFNRLTHLPDSLSC 179

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +RL    + L ++   L+A P ++ +   + +LD+S N ++ LP ++S+  +L++
Sbjct: 180 LSRL----RTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKI 231


>gi|74200782|dbj|BAE24769.1| unnamed protein product [Mus musculus]
          Length = 469

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 155/324 (47%), Gaps = 37/324 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 32  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 80  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 139

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 140 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 199

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 200 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 258

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 259 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 318

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTL 313
           LPP IG + +LR L +  N L  L
Sbjct: 319 LPPTIGYLHSLRTLAVDENFLPEL 342



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 137/268 (51%), Gaps = 6/268 (2%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+ +  F  A  G      V L+ L L  N+++ L + +  L  L  L++ +N+ SELP 
Sbjct: 151 NDAFLEFLPANFG----RLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE 206

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            + ++  L+ L +  N++  +P  IG    LV  D S N+++ +   +  C  L D   S
Sbjct: 207 VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLS 266

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +N +  LP+ +    K++ L V+ N+LT+L N  I + ++L E   S N L  +P TIG 
Sbjct: 267 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGY 325

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  L  L + +N +  +P  I  C ++    + +N L  LP E+G++ +L  L+L  N+L
Sbjct: 326 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRL 385

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPP 292
           K       +L+ L+ L LS+N    L P
Sbjct: 386 KNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 120/320 (37%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 24  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 83

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 84  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 119

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L KL           
Sbjct: 120 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL----------- 168

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 169 -----------RILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 201

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE  D   +                 +EL ++   L  +P  I +   +  LD
Sbjct: 202 ----SELPEVLDQIQNL----------------RELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N I+ +  ++S C +L+
Sbjct: 242 MSKNRIETVDMDISGCEALE 261


>gi|365920060|ref|ZP_09444414.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364578571|gb|EHM55771.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 412

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 166/342 (48%), Gaps = 41/342 (11%)

Query: 79  KLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLN 138
           + + LPA IG+L  L+ L + +  + ++P EIG    L K D + NQL  LP+++G+  N
Sbjct: 58  QFALLPAEIGQLSNLQELVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLPATIGQLSN 117

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           L      +N +  LP  +     + +LD+  N+LTVL                       
Sbjct: 118 LQKLSLGDNQLVILPVAIGQLGNLQELDLWHNQLTVL----------------------- 154

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
            P TIG L  L  L+L +N++ ++P+ I    +L +  +G+N L+ LPAE+G+L  L  L
Sbjct: 155 -PATIGQLGNLQVLNLRENKLTTLPAGIGQLGNLQKLSLGSNRLTTLPAEIGQLHNLQEL 213

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L  +QL    VE  QL  L  L L  + L+ LP  IG+++ L+ + +  + L  L   +
Sbjct: 214 ILCEDQLTTLPVEIGQLGNLQKLYLLGHQLAALPNSIGQLSNLQSITIDSHLLLELIDMV 273

Query: 318 VNGPTPALLKYLRSR----LPENEDSEASTTKEDL----ITM----ATRLSVTSKELSLE 365
            + P    LKYL  R    LP      ++  K DL    IT       +LS   K L+L 
Sbjct: 274 PHLPK---LKYLSLRNLTTLPTKIGQLSNLQKLDLSDNQITALPDAIGQLSNLQK-LNLS 329

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           G  L+A+P  I +   + +LDLS N +  LP  +    +LQ+
Sbjct: 330 GNKLTALPDVIGQLDNLQELDLSGNKLATLPESIDQLHNLQI 371



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 148/294 (50%), Gaps = 23/294 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L+L   ++ +L  ++  L  L  L+++ N+L+ LPA IG+L  L+ L +  N ++ 
Sbjct: 71  NLQELVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLPATIGQLSNLQKLSLGDNQLVI 130

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG    L + D   NQL  LP+++G+  NL       N +T+LP  +     + KL
Sbjct: 131 LPVAIGQLGNLQELDLWHNQLTVLPATIGQLGNLQVLNLRENKLTTLPAGIGQLGNLQKL 190

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L    I     L ELI  ++ L  +P  IG L  L +L L  +++ ++P+S
Sbjct: 191 SLGSNRLTTLPAE-IGQLHNLQELILCEDQLTTLPVEIGQLGNLQKLYLLGHQLAALPNS 249

Query: 226 ISGCCSLAEF---------------------YMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           I    +L                        Y+    L+ LP ++G+LS L  LDL  NQ
Sbjct: 250 IGQLSNLQSITIDSHLLLELIDMVPHLPKLKYLSLRNLTTLPTKIGQLSNLQKLDLSDNQ 309

Query: 265 LKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           +        QL  L  L+LS N L+ LP  IG++  L++L L+GN L TL  S+
Sbjct: 310 ITALPDAIGQLSNLQKLNLSGNKLTALPDVIGQLDNLQELDLSGNKLATLPESI 363


>gi|383422865|gb|AFH34646.1| malignant fibrous histiocytoma-amplified sequence 1 [Macaca
           mulatta]
 gi|387540264|gb|AFJ70759.1| malignant fibrous histiocytoma-amplified sequence 1 [Macaca
           mulatta]
          Length = 1052

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/295 (34%), Positives = 145/295 (49%), Gaps = 28/295 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSI 103
           D++ L L +N +E++ E L + L  L VL +  N+ + LP A+ EL H L  LDVS N +
Sbjct: 64  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 104 MKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
             +  E+ SA   L K + S NQL  LP+ LG    L +   S N +T LP+ L+  S++
Sbjct: 124 TALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPDSLSCLSRL 183

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    + ++
Sbjct: 184 RTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTL 242

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------- 275
           P+      SL    + NN L ALPA+  +L +L  L+L SN L+E+      L       
Sbjct: 243 PAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELY 302

Query: 276 -----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                            RL  L L NN +  LP  I ++T L +L+L GN +  L
Sbjct: 303 LSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVL 357



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/280 (34%), Positives = 132/280 (47%), Gaps = 28/280 (10%)

Query: 66  NLPLLTVLNVSHNKLSE------------------------LPAAIGEL-HMLKSLDVSF 100
           NL  +  LN+ +N L E                        LP A+ EL H L  LDVS 
Sbjct: 61  NLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 120

Query: 101 NSIMKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           N +  +  E+ SA   L K + S NQL  LP+ LG    L +   S N +T LP+ L+  
Sbjct: 121 NRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPDSLSCL 180

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           S++  LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    +
Sbjct: 181 SRLRTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALCALKILWLSGAEL 239

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
            ++P+      SL    + NN L ALPA+  +L +L  L+L SN L+E+      L  L 
Sbjct: 240 GTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLE 299

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L LS N L+ +P  I  +  L  L L  N +R L  S+V
Sbjct: 300 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIV 339



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 130/267 (48%), Gaps = 3/267 (1%)

Query: 46  DLQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            L +L ++HN +  L  E +  L  L  LN+SHN+L  LPA +G L  L+ LDVSFN + 
Sbjct: 112 HLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLT 171

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PD +   + L   D   NQL   P  L + + L +   S+N +  LPED++    +  
Sbjct: 172 HLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKI 231

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L + G +L  L          L  L+   N L  +P     L RL  L+L  N +   P+
Sbjct: 232 LWLSGAELGTLPAGF-CELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPA 290

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
           ++     L E Y+  N L+++P+ +  L +L TL L +N+++       +L  L  L L 
Sbjct: 291 ALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQ 350

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            N ++ LP   G+++ +    +  NPL
Sbjct: 351 GNQIAVLPDNFGQLSRVGLWKIKDNPL 377



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 25/285 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL L+HN +  L   L  L  L  L+VS N+L+ LP ++  L  L++LDV  N +  
Sbjct: 136 ELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPDSLSCLSRLRTLDVDHNQLTA 195

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P ++    AL + D SSN+L+ LP  +     L     S   + +LP    + + +  L
Sbjct: 196 FPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELASLESL 255

Query: 166 DVEGNKLTV---------------LSNNLIASWTM-------LTELIASKNLLNGMPETI 203
            ++ N L                 LS+NL+  +         L EL  S+N L  +P  I
Sbjct: 256 MLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLI 315

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
             L RL+ L L  NRI  +P SI     L E  +  N ++ LP   G+LS++G   +  N
Sbjct: 316 SGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDN 375

Query: 264 QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            L +   E C   +  +      L+   P +       KLLL G+
Sbjct: 376 PLIQPPYEVCMKGIPYIAAYQKELAHSQPAVQPRL---KLLLMGH 417



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 141/310 (45%), Gaps = 51/310 (16%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPEDLADCSK-MS 163
           +P  +G   AL   +  +N L+E+P  LG  L +L       N    LP  +A+    ++
Sbjct: 58  LPANLGDIEAL---NLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLT 114

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +LDV  N+LT L   ++++   L +L  S N L  +P  +G+L++L  LD+  NR+  +P
Sbjct: 115 ELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLP 174

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
            S+S  C                     LS+L TLD+  NQL  +  +  QL  L  LD+
Sbjct: 175 DSLS--C---------------------LSRLRTLDVDHNQLTAFPRQLLQLVALEELDV 211

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           S+N L GLP +I  +  L+ L L+G  L TL +          L  L S + +N   +A 
Sbjct: 212 SSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCE------LASLESLMLDNNGLQAL 265

Query: 343 TTKEDLITMATRLSVTS----------------KELSLEGMNLSAIPSEIWEAGEITKLD 386
             +   +     L+++S                +EL L    L+++PS I   G +  L 
Sbjct: 266 PAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLW 325

Query: 387 LSRNSIQELP 396
           L  N I+ LP
Sbjct: 326 LDNNRIRYLP 335



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 93/182 (51%), Gaps = 1/182 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L ++ N +  L ED+  L  L +L +S  +L  LPA   EL  L+SL +  N + 
Sbjct: 204 VALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQ 263

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P +      L   + SSN L+E P++L     L +   S N +TS+P  ++   ++  
Sbjct: 264 ALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLT 323

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L ++ N++  L ++++   T L EL+   N +  +P+  G LSR+    +  N ++  P 
Sbjct: 324 LWLDNNRIRYLPDSIV-ELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPY 382

Query: 225 SI 226
            +
Sbjct: 383 EV 384



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 19/176 (10%)

Query: 237 MGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 293
           +GNN L  +P  LG  L  L  L L  N+         +L   L+ LD+S+N L+ L  E
Sbjct: 70  LGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAE 129

Query: 294 I-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITM 351
           +   +  LRKL L+ N L  L         PA L  L ++L E + S    T   D ++ 
Sbjct: 130 VVSALRELRKLNLSHNQLPAL---------PAQLGAL-AQLEELDVSFNRLTHLPDSLSC 179

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +RL    + L ++   L+A P ++ +   + +LD+S N ++ LP ++S+  +L++
Sbjct: 180 LSRL----RTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKI 231


>gi|158334565|ref|YP_001515737.1| hypothetical protein AM1_1392 [Acaryochloris marina MBIC11017]
 gi|158304806|gb|ABW26423.1| leucine-rich repeat-containing protein [Acaryochloris marina
           MBIC11017]
          Length = 305

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 136/241 (56%), Gaps = 3/241 (1%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T LN+++  L+++P  IG+L  L+SLD+S N + ++  EIG  T L     + NQL+ LP
Sbjct: 57  TDLNLTNLSLTQVPPEIGQLSQLQSLDLSGNQLRQLTPEIGQLTQLQDLFLTQNQLESLP 116

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
             +G+  NL   +A  N ++ LP+++   S +  L +  NKLT L    I   + L +L 
Sbjct: 117 PEIGQLSNLEWLQADGNQLSRLPKEIGQLSNLEMLWLRRNKLTHLPAE-IGQLSALADLE 175

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
              N L  +P  +G L++L  L +  N + S+P++I    SL    + NN   ALP+++G
Sbjct: 176 IMDNQLQTLPSELGRLTQLQSLKVQNNALSSLPATIVQLSSLKLLDLDNNQFKALPSQVG 235

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQLRLSVLD-LSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            L+ L TLDL  NQLKE   E  QL+   L  + +N L  LPPE+ K+  LR + L+GNP
Sbjct: 236 LLNNLETLDLSDNQLKELPSELGQLKKLQLLVVRDNQLHRLPPEMTKLPKLR-MFLSGNP 294

Query: 310 L 310
           L
Sbjct: 295 L 295



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 120/264 (45%), Gaps = 35/264 (13%)

Query: 3   RILKAARTSGS-LNLSNRSLRDVPNEV-----YKNFDEAGEG-----DKWWEAVDLQKLI 51
           RI +A  T  + LNL+N SL  VP E+      ++ D +G        +  +   LQ L 
Sbjct: 47  RIQQAIDTQATDLNLTNLSLTQVPPEIGQLSQLQSLDLSGNQLRQLTPEIGQLTQLQDLF 106

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L  N +E L  ++  L  L  L    N+LS LP  IG+L  L+ L +  N +  +P EIG
Sbjct: 107 LTQNQLESLPPEIGQLSNLEWLQADGNQLSRLPKEIGQLSNLEMLWLRRNKLTHLPAEIG 166

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
             +AL   +   NQL+ LPS LGR   L   K  NN ++SLP  +   S +  LD++ N+
Sbjct: 167 QLSALADLEIMDNQLQTLPSELGRLTQLQSLKVQNNALSSLPATIVQLSSLKLLDLDNNQ 226

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
              L                        P  +G L+ L  LDL  N++  +PS +     
Sbjct: 227 FKAL------------------------PSQVGLLNNLETLDLSDNQLKELPSELGQLKK 262

Query: 232 LAEFYMGNNALSALPAELGKLSKL 255
           L    + +N L  LP E+ KL KL
Sbjct: 263 LQLLVVRDNQLHRLPPEMTKLPKL 286



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 38/272 (13%)

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
           +D   +N  +T +P ++   S++  LD+ GN+L  L+   I   T L +L  ++N L  +
Sbjct: 57  TDLNLTNLSLTQVPPEIGQLSQLQSLDLSGNQLRQLTPE-IGQLTQLQDLFLTQNQLESL 115

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P  IG LS L  L    N++  +P  I    +L   ++  N L+ LPAE+G+LS L  L+
Sbjct: 116 PPEIGQLSNLEWLQADGNQLSRLPKEIGQLSNLEMLWLRRNKLTHLPAEIGQLSALADLE 175

Query: 260 LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           +  NQL+    E  +L +L  L + NN+LS LP  I ++++L+ L L  N  + L S + 
Sbjct: 176 IMDNQLQTLPSELGRLTQLQSLKVQNNALSSLPATIVQLSSLKLLDLDNNQFKALPSQV- 234

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
                 LL  L +                              L L    L  +PSE+ +
Sbjct: 235 -----GLLNNLET------------------------------LDLSDNQLKELPSELGQ 259

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQVKFS 410
             ++  L +  N +  LPPE++    L++  S
Sbjct: 260 LKKLQLLVVRDNQLHRLPPEMTKLPKLRMFLS 291



 Score = 45.4 bits (106), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 34/156 (21%)

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
           +A   + + L+L+N SL+ +PPEIG+++ L+ L L+GN LR L        TP + +   
Sbjct: 50  QAIDTQATDLNLTNLSLTQVPPEIGQLSQLQSLDLSGNQLRQL--------TPEIGQL-- 99

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKE---------LSLEGMNLSAIPSEIWEAGE 381
                       T  +DL     +L     E         L  +G  LS +P EI +   
Sbjct: 100 ------------TQLQDLFLTQNQLESLPPEIGQLSNLEWLQADGNQLSRLPKEIGQLSN 147

Query: 382 ITKLDLSRNSIQELPPE---LSSCASLQVKFSDLVT 414
           +  L L RN +  LP E   LS+ A L++  + L T
Sbjct: 148 LEMLWLRRNKLTHLPAEIGQLSALADLEIMDNQLQT 183


>gi|45658593|ref|YP_002679.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|418694153|ref|ZP_13255197.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|418713547|ref|ZP_13274273.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421085480|ref|ZP_15546333.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421103545|ref|ZP_15564142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45601837|gb|AAS71316.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|409958164|gb|EKO17061.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|410366508|gb|EKP21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410432116|gb|EKP76474.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410790022|gb|EKR83717.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|456986299|gb|EMG21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 423

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 186/395 (47%), Gaps = 51/395 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LS + L+ +PN++              +  +LQKL L  N    L +++  L  L  
Sbjct: 45  NLDLSFQGLKTLPNKI-------------GQLKNLQKLDLGGNEPTILSKEIWQLKDLQK 91

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +  +N+L  LP  
Sbjct: 92  LNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKE 151

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +G+  NL +    +N + SLP ++     +  LD+  N+ T +S  ++   T L  L   
Sbjct: 152 IGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLET-LENLDLR 210

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N     P E+ +L
Sbjct: 211 SNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILEL 270

Query: 253 SKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  L++L L+GN + 
Sbjct: 271 KNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKIT 330

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L   ++       LK L                                LSL    L+A
Sbjct: 331 ILPKEILQ------LKNLEW------------------------------LSLSNNKLNA 354

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +P EI +  ++ +L+L  N +  LP E+    +LQ
Sbjct: 355 LPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQ 389



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 37/213 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                   P  ++ L+S                            K L L     + +  
Sbjct: 172 --------PTEIEQLKSL---------------------------KNLDLNHNEFTTVSK 196

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           E+     +  LDL  N ++ +P E+    SL+V
Sbjct: 197 EVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 65/120 (54%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N + +  +++  L  L  L++ HN+++ LP  + +L  L+ L +S N I  +P EI   
Sbjct: 280 YNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L     S+N+L  LP  +G+   L   +  NN +T+LP+++     + +L+++ N ++
Sbjct: 340 KNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|410449672|ref|ZP_11303725.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410016429|gb|EKO78508.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 355

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 110/290 (37%), Positives = 151/290 (52%), Gaps = 9/290 (3%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           ++Y++  EA     + +  D+  L L+   I+ L   + NL  L  L++  N+L+ LP  
Sbjct: 32  KIYRDLREA-----FQKPSDVHILDLSGQQIKNLPRQIANLKNLRELDLRDNQLTTLPKE 86

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG+LH L+SLD+S NS+  +P+EIG    L K D   N L  LP ++GR  NL     SN
Sbjct: 87  IGQLHNLQSLDLSSNSLSTLPEEIGHLKNLKKLDLHYNLLITLPENIGRLQNLEVLDLSN 146

Query: 147 NCIT--SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           N  T   L E + D   + KLD+  N L+ L    I     L  L  S+N L  +P+ IG
Sbjct: 147 NRRTFFFLSEKIGDLQSLEKLDLSENSLSTLPKE-IGKLQCLQSLDLSENSLAILPKEIG 205

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            L  L  L L  NR+ ++P  I     L    +  N+L+ LP E+GKL  L +LDL  N 
Sbjct: 206 KLQCLRELSLKGNRLKTLPKEIGKLQCLHSLDLSENSLTTLPKEIGKLQCLHSLDLSENS 265

Query: 265 LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L     E  +L+ LS LDLS NSL+ LP EI K+  L  L L  N L TL
Sbjct: 266 LTTLPKEIGKLQNLSNLDLSENSLTTLPKEIAKLQNLYDLDLRKNSLTTL 315



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 115/225 (51%), Gaps = 3/225 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNK--LSELPAAIGELHMLKSLDVSFNSI 103
           +L+KL L +N +  L E++  L  L VL++S+N+     L   IG+L  L+ LD+S NS+
Sbjct: 115 NLKKLDLHYNLLITLPENIGRLQNLEVLDLSNNRRTFFFLSEKIGDLQSLEKLDLSENSL 174

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             +P EIG    L   D S N L  LP  +G+   L +     N + +LP+++     + 
Sbjct: 175 STLPKEIGKLQCLQSLDLSENSLAILPKEIGKLQCLRELSLKGNRLKTLPKEIGKLQCLH 234

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            LD+  N LT L    I     L  L  S+N L  +P+ IG L  L  LDL +N + ++P
Sbjct: 235 SLDLSENSLTTLPKE-IGKLQCLHSLDLSENSLTTLPKEIGKLQNLSNLDLSENSLTTLP 293

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
             I+   +L +  +  N+L+ LP E+GK   L  LDL  N    Y
Sbjct: 294 KEIAKLQNLYDLDLRKNSLTTLPKEIGKPQNLSNLDLKENSFSVY 338



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 144/335 (42%), Gaps = 59/335 (17%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S  ++  LP  I  L  L+ LD+  N +  +P EIG    L   D SSN L  LP 
Sbjct: 49  ILDLSGQQIKNLPRQIANLKNLRELDLRDNQLTTLPKEIGQLHNLQSLDLSSNSLSTLPE 108

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G   NL       N + +LPE++     +  LD+  N+ T                  
Sbjct: 109 EIGHLKNLKKLDLHYNLLITLPENIGRLQNLEVLDLSNNRRTFFF--------------- 153

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                  + E IG L  L +LDL +N + ++P  I     L    +  N+L+ LP E+GK
Sbjct: 154 -------LSEKIGDLQSLEKLDLSENSLSTLPKEIGKLQCLQSLDLSENSLAILPKEIGK 206

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L  N+LK    E  +L+ L  LDLS NSL+ LP EIGK+  L  L L+ N L
Sbjct: 207 LQCLRELSLKGNRLKTLPKEIGKLQCLHSLDLSENSLTTLPKEIGKLQCLHSLDLSENSL 266

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            TL                               KE  I     LS     L L   +L+
Sbjct: 267 TTL------------------------------PKE--IGKLQNLS----NLDLSENSLT 290

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            +P EI +   +  LDL +NS+  LP E+    +L
Sbjct: 291 TLPKEIAKLQNLYDLDLRKNSLTTLPKEIGKPQNL 325



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 91/179 (50%), Gaps = 1/179 (0%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           +K  +   L+KL L+ N++  L +++  L  L  L++S N L+ LP  IG+L  L+ L +
Sbjct: 156 EKIGDLQSLEKLDLSENSLSTLPKEIGKLQCLQSLDLSENSLAILPKEIGKLQCLRELSL 215

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N +  +P EIG    L   D S N L  LP  +G+   L     S N +T+LP+++  
Sbjct: 216 KGNRLKTLPKEIGKLQCLHSLDLSENSLTTLPKEIGKLQCLHSLDLSENSLTTLPKEIGK 275

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
              +S LD+  N LT L    IA    L +L   KN L  +P+ IG    L  LDL +N
Sbjct: 276 LQNLSNLDLSENSLTTLPKE-IAKLQNLYDLDLRKNSLTTLPKEIGKPQNLSNLDLKEN 333



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 13/162 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+LS  SL  +P E+ K                L++L L  N ++ L +++  L  L  
Sbjct: 189 SLDLSENSLAILPKEIGK-------------LQCLRELSLKGNRLKTLPKEIGKLQCLHS 235

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S N L+ LP  IG+L  L SLD+S NS+  +P EIG    L   D S N L  LP  
Sbjct: 236 LDLSENSLTTLPKEIGKLQCLHSLDLSENSLTTLPKEIGKLQNLSNLDLSENSLTTLPKE 295

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           + +  NL D     N +T+LP+++     +S LD++ N  +V
Sbjct: 296 IAKLQNLYDLDLRKNSLTTLPKEIGKPQNLSNLDLKENSFSV 337



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 108/242 (44%), Gaps = 39/242 (16%)

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
           A + +   + E     S +  LDL   +I ++P  I+   +L E  + +N L+ LP E+G
Sbjct: 29  AEEKIYRDLREAFQKPSDVHILDLSGQQIKNLPRQIANLKNLRELDLRDNQLTTLPKEIG 88

Query: 251 K-----------------------LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN- 285
           +                       L  L  LDLH N L        +L+ L VLDLSNN 
Sbjct: 89  QLHNLQSLDLSSNSLSTLPEEIGHLKNLKKLDLHYNLLITLPENIGRLQNLEVLDLSNNR 148

Query: 286 -SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
            +   L  +IG + +L KL L+ N L TL   +        L+ L+S L  +E+S A   
Sbjct: 149 RTFFFLSEKIGDLQSLEKLDLSENSLSTLPKEI------GKLQCLQS-LDLSENSLAILP 201

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
           KE       +L    +ELSL+G  L  +P EI +   +  LDLS NS+  LP E+     
Sbjct: 202 KE-----IGKLQCL-RELSLKGNRLKTLPKEIGKLQCLHSLDLSENSLTTLPKEIGKLQC 255

Query: 405 LQ 406
           L 
Sbjct: 256 LH 257


>gi|169260659|gb|ACA52056.1| densin 11-21 [Rattus norvegicus]
          Length = 495

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 155/324 (47%), Gaps = 37/324 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 32  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 80  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 139

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 140 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 199

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 200 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 258

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 259 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 318

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTL 313
           LPP IG + +LR L +  N L  L
Sbjct: 319 LPPTIGYLHSLRTLAVDENFLPEL 342



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 137/268 (51%), Gaps = 6/268 (2%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+ +  F  A  G      V L+ L L  N+++ L + +  L  L  L++ +N+ SELP 
Sbjct: 151 NDAFLEFLPANFG----RLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPE 206

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            + ++  L+ L +  N++  +P  IG    LV  D S N+++ +   +  C  L D   S
Sbjct: 207 VLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLS 266

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +N +  LP+ +    K++ L V+ N+LT+L N  I + ++L E   S N L  +P TIG 
Sbjct: 267 SNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGY 325

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L  L  L + +N +  +P  I  C ++    + +N L  LP E+G++ +L  L+L  N+L
Sbjct: 326 LHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRL 385

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPP 292
           K       +L+ L+ L LS+N    L P
Sbjct: 386 KNLPFSFTKLKELAALWLSDNQSKALIP 413



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 120/320 (37%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 24  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 83

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 84  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 119

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L KL           
Sbjct: 120 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKL----------- 168

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 169 -----------RILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 201

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE  D   +                 +EL ++   L  +P  I +   +  LD
Sbjct: 202 ----SELPEVLDQIQNL----------------RELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N I+ +  ++S C +L+
Sbjct: 242 MSKNRIETVDMDISGCEALE 261


>gi|418690500|ref|ZP_13251616.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|421128085|ref|ZP_15588303.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421133358|ref|ZP_15593506.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|400360685|gb|EJP16657.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|410022366|gb|EKO89143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410434552|gb|EKP83690.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 423

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 190/407 (46%), Gaps = 51/407 (12%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           +++ L+      +L+LS   L+ +PN++              +  +LQKL L  N    L
Sbjct: 33  LEKALQNPADVRNLDLSFLGLKTLPNKI-------------GQLKNLQKLDLGGNEPTIL 79

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +++  L  L  LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +
Sbjct: 80  SKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLN 139

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
             +N+L  LP  +G+  NL +    +N + SLP ++     +  LD+  N+ T +S  ++
Sbjct: 140 LDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVM 199

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
              T L  L    N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N
Sbjct: 200 LLET-LENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGEN 258

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
                P E+ +L  L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  
Sbjct: 259 RFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPD 318

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L++L L+GN +  L   ++       LK L                              
Sbjct: 319 LQELHLSGNKITILPKEILQ------LKNLEW---------------------------- 344

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             LSL    L+A+P EI +  ++ +L+L  N +  LP E+    +LQ
Sbjct: 345 --LSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQ 389



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 37/213 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                   P  ++ L+S                            K L L     + +  
Sbjct: 172 --------PTEIEQLKSL---------------------------KNLDLNNNEFTTVSK 196

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           E+     +  LDL  N ++ +P E+    SL+V
Sbjct: 197 EVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 65/120 (54%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N + +  +++  L  L  L++ HN+++ LP  + +L  L+ L +S N I  +P EI   
Sbjct: 280 YNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L     S+N+L  LP  +G+   L   +  NN +T+LP+++     + +L+++ N ++
Sbjct: 340 KNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|390475905|ref|XP_002807686.2| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
           [Callithrix jacchus]
          Length = 1471

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 169/358 (47%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           QL+    E   C + LSVL L +N L+ LPPE+   + L  L + GN L++L  +L +
Sbjct: 323 QLEALPSEIGGC-VALSVLSLRDNRLAVLPPELAHTSELHVLDVAGNRLQSLPFALTH 379



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 121/241 (50%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N++ ++PS
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNQLEALPS 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   S+L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTSELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 170/365 (46%), Gaps = 41/365 (11%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENED--------SEASTTKEDLITMATRLSVTSK--ELSL 364
                    ++LK  ++RL E  +        SE   T+  L+ +   L   +K   L++
Sbjct: 269 ---------SILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNV 319

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISGCY 424
           +   L A+PSEI     ++ L L  N +  LPPEL+  + L V   D+  N+   +    
Sbjct: 320 DRNQLEALPSEIGGCVALSVLSLRDNRLAVLPPELAHTSELHVL--DVAGNRLQSLPFAL 377

Query: 425 LYWNL 429
            + NL
Sbjct: 378 THLNL 382



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 122/307 (39%), Gaps = 83/307 (27%)

Query: 93  LKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++S+D    S+  +P+EI   + +L +    +NQL+ELP    R LNL     S+N I  
Sbjct: 14  VESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQR 73

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP +                        +A++  L EL  S+N +  +PE+I     L  
Sbjct: 74  LPPE------------------------VANFMQLVELDVSRNDIPEIPESIKFCKALEI 109

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D   N +  +P   +   SLA   + + +L ALP ++G L+ L TL+L  N LK     
Sbjct: 110 ADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKS---- 165

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
                             LP  +  +  L +L L GN L  L  +L  G  P L      
Sbjct: 166 ------------------LPASLSFLVKLEQLDLGGNDLEVLPDTL--GALPNL------ 199

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                       +EL L+   LSA+P E+     +  LD+S N 
Sbjct: 200 ----------------------------RELWLDRNQLSALPPELGNLRRLVCLDVSENR 231

Query: 392 IQELPPE 398
           ++ELP E
Sbjct: 232 LEELPAE 238


>gi|359728059|ref|ZP_09266755.1| hypothetical protein Lwei2_14517 [Leptospira weilii str.
           2006001855]
          Length = 576

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 180/411 (43%), Gaps = 47/411 (11%)

Query: 42  WEAVDL---QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           WE  +L   Q+L LA N +  + E+++ L  L  L++  N+L  LP  IG+L  L  L +
Sbjct: 66  WEVGNLGNLQELNLAFNELSTIPEEIKRLQKLQSLDLYGNRLEALPPEIGQLQNLSWLSL 125

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N +  +P EI     L   + S ++L  LP  +G   NL     S N ++  PE++  
Sbjct: 126 SKNQLATLPAEIKLLQNLQYLNLSKDRLTILPKGIGELSNLKILNVSYNKVSVFPEEIGK 185

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              +  LD+  N++ V+S   +     L  L   +N L  +P+ IG L  L  L+L  N+
Sbjct: 186 LQNLKDLDLSNNRIQVVSEK-VGKLRNLERLNLIENRLTVLPKEIGQLQNLQTLNLGYNK 244

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           + +IP  I    SL E  + +N L  LP ELG ++ L +L L+ N++     E   L+ L
Sbjct: 245 LANIPKEIGELRSLKELDLSDNELKVLPKELGTIANLQSLKLNDNRIVNLPKEIELLQNL 304

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL------------VNGPTPAL 325
             LDLS N    LP EIG++  L+ L L+ N   TL S +             N   P  
Sbjct: 305 RSLDLSGNQFKVLPKEIGRLQNLQSLDLSDNQFTTLPSEVGELRNLKKLNIDSNPLLPGE 364

Query: 326 LKYLRSRLPENEDSEASTTKEDLITM-----------ATRLSVTSKE------------- 361
              +++ LP  E   +   K+D I                LS+  KE             
Sbjct: 365 KDKIQNLLPNCEIDSSYAGKDDQIYYDLNIASENPLKVLNLSLEYKEYESFYNFPKKILE 424

Query: 362 ------LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                 L L  + L  IP EI     +  L L  N ++ LP E+    +L+
Sbjct: 425 FRNLRGLGLYDVGLEIIPKEIRRLQNLETLRLGLNRLKTLPKEIGQLKNLR 475



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 168/394 (42%), Gaps = 70/394 (17%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L++N I+ + E +  L  L  LN+  N+L+ LP  IG+L  L++L++ +N +  
Sbjct: 188 NLKDLDLSNNRIQVVSEKVGKLRNLERLNLIENRLTVLPKEIGQLQNLQTLNLGYNKLAN 247

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP EIG   +L + D S N+LK LP  LG   NL   K ++N I +LP+++     +  L
Sbjct: 248 IPKEIGELRSLKELDLSDNELKVLPKELGTIANLQSLKLNDNRIVNLPKEIELLQNLRSL 307

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL----- 220
           D+ GN+  VL    I     L  L  S N    +P  +G L  L +L++  N +L     
Sbjct: 308 DLSGNQFKVLPKE-IGRLQNLQSLDLSDNQFTTLPSEVGELRNLKKLNIDSNPLLPGEKD 366

Query: 221 ---------SIPSSISG------------------CCSLAEFYMGNNALSALPAELGKLS 253
                     I SS +G                    +L+  Y    +    P ++ +  
Sbjct: 367 KIQNLLPNCEIDSSYAGKDDQIYYDLNIASENPLKVLNLSLEYKEYESFYNFPKKILEFR 426

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L+   L+    E  +L+ L  L L  N L  LP EIG++  LR L L  N L+T
Sbjct: 427 NLRGLGLYDVGLEIIPKEIRRLQNLETLRLGLNRLKTLPKEIGQLKNLRGLSLEANELKT 486

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L   +        L+ LR                               L+L        
Sbjct: 487 LPKEIEQ------LQNLRG------------------------------LNLHQNRFKIF 510

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           P EI +  ++ KLDLS N +  LP E+    +LQ
Sbjct: 511 PKEIGQLRKLQKLDLSVNQLTTLPAEIGQLQNLQ 544



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 148/350 (42%), Gaps = 78/350 (22%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           +K  +  +L++L L  N +  L +++  L  L  LN+ +NKL+ +P  IGEL  LK LD+
Sbjct: 204 EKVGKLRNLERLNLIENRLTVLPKEIGQLQNLQTLNLGYNKLANIPKEIGELRSLKELDL 263

Query: 99  SFNSIMKIPDEIGSATALVKF-----------------------DCSSNQLKELPSSLGR 135
           S N +  +P E+G+   L                          D S NQ K LP  +GR
Sbjct: 264 SDNELKVLPKELGTIANLQSLKLNDNRIVNLPKEIELLQNLRSLDLSGNQFKVLPKEIGR 323

Query: 136 CLNLSDFKASNNCITSLPEDLA--------------------------------DCSKMS 163
             NL     S+N  T+LP ++                                 D S   
Sbjct: 324 LQNLQSLDLSDNQFTTLPSEVGELRNLKKLNIDSNPLLPGEKDKIQNLLPNCEIDSSYAG 383

Query: 164 KLDVEGNKLTVLSNNLI-------------ASWTMLTELIASKNL---------LNGMPE 201
           K D     L + S N +             + +    +++  +NL         L  +P+
Sbjct: 384 KDDQIYYDLNIASENPLKVLNLSLEYKEYESFYNFPKKILEFRNLRGLGLYDVGLEIIPK 443

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            I  L  L  L L  NR+ ++P  I    +L    +  N L  LP E+ +L  L  L+LH
Sbjct: 444 EIRRLQNLETLRLGLNRLKTLPKEIGQLKNLRGLSLEANELKTLPKEIEQLQNLRGLNLH 503

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            N+ K +  E  QLR L  LDLS N L+ LP EIG++  L++L L+ NPL
Sbjct: 504 QNRFKIFPKEIGQLRKLQKLDLSVNQLTTLPAEIGQLQNLQELNLSDNPL 553



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 5/165 (3%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           +   L + N SL     E + NF +     K  E  +L+ L L    +E + +++R L  
Sbjct: 396 SENPLKVLNLSLEYKEYESFYNFPK-----KILEFRNLRGLGLYDVGLEIIPKEIRRLQN 450

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L +  N+L  LP  IG+L  L+ L +  N +  +P EI     L   +   N+ K  
Sbjct: 451 LETLRLGLNRLKTLPKEIGQLKNLRGLSLEANELKTLPKEIEQLQNLRGLNLHQNRFKIF 510

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           P  +G+   L     S N +T+LP ++     + +L++  N L++
Sbjct: 511 PKEIGQLRKLQKLDLSVNQLTTLPAEIGQLQNLQELNLSDNPLSL 555


>gi|119602602|gb|EAW82196.1| scribbled homolog (Drosophila), isoform CRA_a [Homo sapiens]
          Length = 756

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 173/369 (46%), Gaps = 59/369 (15%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNI 57
           R   S++  + SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I
Sbjct: 12  RHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEI 71

Query: 58  EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV 117
           ++L  ++ N   L  L+VS N + E+P +I     L+  D S N + ++PD      +L 
Sbjct: 72  QRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLA 131

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
               +   L+ LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL +
Sbjct: 132 HLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPD 191

Query: 178 NLIA--------------------------------SWTMLTELIA-------------S 192
            L A                                S   L EL A             S
Sbjct: 192 TLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLS 251

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           +NLL  +P+ IG L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL
Sbjct: 252 QNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKL 311

Query: 253 SKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           +KL  L++  N L+    E   C + LSVL L +N L+ LPPE+   T L  L + GN L
Sbjct: 312 TKLTNLNVDRNHLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRL 370

Query: 311 RTLRSSLVN 319
           ++L  +L +
Sbjct: 371 QSLPFALTH 379



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 119/242 (49%), Gaps = 24/242 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 NS 286
           N 
Sbjct: 390 NQ 391


>gi|429961331|gb|ELA40876.1| hypothetical protein VICG_02090, partial [Vittaforma corneae ATCC
           50505]
          Length = 728

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 172/384 (44%), Gaps = 63/384 (16%)

Query: 46  DLQKLILAHNNIEKLK---EDLRNLPLLTVLNVSH---------------------NKLS 81
           ++++L+L++NN+E L    E+L NL +L  LNV+                      N+L 
Sbjct: 70  EIKELVLSNNNLETLPPVMEELENLKVL-FLNVNRLKLLPDEIGKLVSLQELCLSCNELK 128

Query: 82  ELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
            LPA + EL  L+ LD+  N   K P+ +G   +L + D S N+L+ LP+ +G  +NL D
Sbjct: 129 LLPAKMVELKSLQKLDLWKNRFEKFPNVVGELKSLQELDLSGNKLESLPAVIGNLINLQD 188

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
                N + +LP ++     + KL+++ N+   L   +I + T L EL    N L  +P+
Sbjct: 189 LDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLP-AVIGNLTNLQELDLDHNKLKTLPD 247

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
           TIG L  L  L    N   S+P+ +    +L E    +N L  LP E+G+L  L  L L 
Sbjct: 248 TIGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKLKLLPVEIGELKNLQKLYLS 307

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N LK        L+ L  L LS N L  LP  IG +  L+ L L  N L+TL  ++   
Sbjct: 308 GNNLKTLPDTIGGLKDLRELSLSGNELESLPAVIGNLVNLQYLNLDHNKLKTLPDTI--- 364

Query: 321 PTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                LK LR                              +L L G  L  +P  I E  
Sbjct: 365 ---GELKNLR------------------------------KLYLGGSKLEILPVAIGELE 391

Query: 381 EITKLDLSRNSIQELPPELSSCAS 404
            + KL LS N ++ LP E+   + 
Sbjct: 392 NLQKLHLSGNKLETLPIEIEKLSG 415



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 141/298 (47%), Gaps = 23/298 (7%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D+  + V LQ+L L+ N ++ L   +  L  L  L++  N+  + P  +GEL  L+ LD+
Sbjct: 109 DEIGKLVSLQELCLSCNELKLLPAKMVELKSLQKLDLWKNRFEKFPNVVGELKSLQELDL 168

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N +  +P  IG+   L   D   N LK LP+ + +  +L      NN   SLP  + +
Sbjct: 169 SGNKLESLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLPAVIGN 228

Query: 159 CSKMSKLDVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLL 196
            + + +LD++ NKL  L + +                      +     L EL    N L
Sbjct: 229 LTNLQELDLDHNKLKTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKL 288

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P  IG L  L +L L  N + ++P +I G   L E  +  N L +LPA +G L  L 
Sbjct: 289 KLLPVEIGELKNLQKLYLSGNNLKTLPDTIGGLKDLRELSLSGNELESLPAVIGNLVNLQ 348

Query: 257 TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L+L  N+LK       +L+ L  L L  + L  LP  IG++  L+KL L+GN L TL
Sbjct: 349 YLNLDHNKLKTLPDTIGELKNLRKLYLGGSKLEILPVAIGELENLQKLHLSGNKLETL 406



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 85/170 (50%), Gaps = 1/170 (0%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  DL+ L   HN  E L   +  L  L  LN   NKL  LP  IGEL  L+ L +S N+
Sbjct: 251 ELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKLKLLPVEIGELKNLQKLYLSGNN 310

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +PD IG    L +   S N+L+ LP+ +G  +NL      +N + +LP+ + +   +
Sbjct: 311 LKTLPDTIGGLKDLRELSLSGNELESLPAVIGNLVNLQYLNLDHNKLKTLPDTIGELKNL 370

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
            KL + G+KL +L    I     L +L  S N L  +P  I  LS  +RL
Sbjct: 371 RKLYLGGSKLEILP-VAIGELENLQKLHLSGNKLETLPIEIEKLSGSLRL 419



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 102/234 (43%), Gaps = 43/234 (18%)

Query: 181 ASWTMLTELIAS-KNLLNGM-PETIGSLSRLIR----LDLHQNRILSIPSSISGCCS--L 232
           A W++L  + A+ ++  NG  P+ IGS  R  R    + +H   I  I S I G     +
Sbjct: 12  AIWSLLVLMGATLQSSDNGANPDGIGSFERHSRNERKISIHSKDIEYIDSYIRGSVKSEI 71

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPP 292
            E  + NN L  LP  + +L  L  L L+ N+LK                       LP 
Sbjct: 72  KELVLSNNNLETLPPVMEELENLKVLFLNVNRLK----------------------LLPD 109

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EIGK+ +L++L L+ N L+ L + +V   +   L   ++R             E    + 
Sbjct: 110 EIGKLVSLQELCLSCNELKLLPAKMVELKSLQKLDLWKNRF------------EKFPNVV 157

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             L  + +EL L G  L ++P+ I     +  LDL  NS++ LP E+    SLQ
Sbjct: 158 GELK-SLQELDLSGNKLESLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSLQ 210


>gi|427738149|ref|YP_007057693.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
 gi|427373190|gb|AFY57146.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
          Length = 989

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 152/309 (49%), Gaps = 26/309 (8%)

Query: 7   AARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRN 66
           AA     L+LS + L  +P E+ K                L+KLIL  +  ++       
Sbjct: 14  AAEGWEELDLSGKGLTTLPPEIGK-------------LTQLKKLILGKHKYDQG------ 54

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
                +++   NKLSELP  IG L  L+ L +  N +  +P EI   T L       NQL
Sbjct: 55  ----YIIDTIGNKLSELPKEIGWLAQLEELQIIRNQLDNLPAEIVQLTNLQSLHLEENQL 110

Query: 127 KELPSSLGRCLNLSDFKAS-NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
             LP+ + R  NL     S NN +  LP ++   S +  L + GNKL+ L   ++   + 
Sbjct: 111 SSLPAEIARLSNLQSLDLSYNNKLIGLPAEIVQLSNLQSLRLRGNKLSSLPTEVV-QLSN 169

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L  L    N L+ +P  I  LS L  LDL  N++ S+P+ I+   +L    +  N LS+L
Sbjct: 170 LQNLDLRYNQLSSLPAEIAQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLSSL 229

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           PAE+ +LS L  LDL  NQL    VE  QL  L  L+L++N L+ L  EI ++T+L+ L 
Sbjct: 230 PAEIVQLSNLQNLDLRYNQLSNLPVEIVQLSNLQSLNLTSNQLNSLLIEIFQLTSLQSLN 289

Query: 305 LTGNPLRTL 313
           L+ N L +L
Sbjct: 290 LSHNKLSSL 298



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 136/261 (52%), Gaps = 4/261 (1%)

Query: 46  DLQKLILAHNN-IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +LQ L L++NN +  L  ++  L  L  L +  NKLS LP  + +L  L++LD+ +N + 
Sbjct: 122 NLQSLDLSYNNKLIGLPAEIVQLSNLQSLRLRGNKLSSLPTEVVQLSNLQNLDLRYNQLS 181

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EI   + L   D   N+L  LP+ + +  NL +   S N ++SLP ++   S +  
Sbjct: 182 SLPAEIAQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLSSLPAEIVQLSNLQN 241

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N+L+ L    I   + L  L  + N LN +   I  L+ L  L+L  N++ S+P 
Sbjct: 242 LDLRYNQLSNLPVE-IVQLSNLQSLNLTSNQLNSLLIEIFQLTSLQSLNLSHNKLSSLPV 300

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDL 282
            I    SL    +  N LS+LPAE+G+L+ L +L+L +NQL     E     L L VL L
Sbjct: 301 EIGQLNSLQSLNLSYNKLSSLPAEIGQLTCLQSLNLRNNQLNRLPTEIGHLHLHLKVLTL 360

Query: 283 SNNSLSGLPPEIGKMTTLRKL 303
            NN L  LP EI    + R L
Sbjct: 361 DNNPLKFLPAEIRNRHSQRIL 381


>gi|326918219|ref|XP_003205388.1| PREDICTED: protein scribble homolog, partial [Meleagris gallopavo]
          Length = 725

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 176/369 (47%), Gaps = 45/369 (12%)

Query: 35  AGEGDKW-----WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGE 89
            G   KW     +  ++L+KL L+ N I++L  ++ N   L  L++S N + E+P +I  
Sbjct: 56  VGTASKWMNTPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKF 115

Query: 90  LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI 149
              L+  D S N + ++P+      +L     +   L+ LP+ +G   NL   +   N +
Sbjct: 116 CKSLEIADFSGNPLSRLPEGFTQLRSLGHLALNDVSLQSLPNDIGNLANLVTLELRENLL 175

Query: 150 TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
            +LP  L+   K+ +LD+ GN L VL + L  +   L EL   +N L+ +P  +G+L RL
Sbjct: 176 KTLPTSLSFLVKLEQLDLGGNDLEVLPDTL-GALPNLRELWLDRNQLSALPPELGNLRRL 234

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
           + LD+ +N++  +P+ +SG  +L +  +  N L  +P  +G+L +L  L +  N+L E  
Sbjct: 235 VCLDVSENKLEQLPNEVSGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTEVT 294

Query: 270 --VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             +  C+  L+ L L+ N L+ LP  +GK+T L  L +  N L +L +            
Sbjct: 295 ESIGDCE-NLTELILTENMLTALPKSLGKLTKLTNLNVDRNRLTSLPAE----------- 342

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                                I     L+V    LSL    L+ +P+E+    E+  LD+
Sbjct: 343 ---------------------IGGCANLNV----LSLRDNRLALLPAELANTTELHVLDV 377

Query: 388 SRNSIQELP 396
           + N +Q LP
Sbjct: 378 AGNRLQNLP 386



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 148/278 (53%), Gaps = 14/278 (5%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R+ G L L++ SL+ +PN++                 +L  L L  N ++ L   L  L 
Sbjct: 140 RSLGHLALNDVSLQSLPNDI-------------GNLANLVTLELRENLLKTLPTSLSFLV 186

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L++  N L  LP  +G L  L+ L +  N +  +P E+G+   LV  D S N+L++
Sbjct: 187 KLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQ 246

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP+ +   + L+D   S N +  +P+ +    ++S L V+ N+LT ++ + I     LTE
Sbjct: 247 LPNEVSGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTEVTES-IGDCENLTE 305

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI ++N+L  +P+++G L++L  L++ +NR+ S+P+ I GC +L    + +N L+ LPAE
Sbjct: 306 LILTENMLTALPKSLGKLTKLTNLNVDRNRLTSLPAEIGGCANLNVLSLRDNRLALLPAE 365

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
           L   ++L  LD+  N+L+        L L  L L+ N 
Sbjct: 366 LANTTELHVLDVAGNRLQNLPFALTNLNLKALWLAENQ 403



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 150/317 (47%), Gaps = 40/317 (12%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDFKASNNCIT 150
           L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C  L ++DF  S N ++
Sbjct: 73  LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADF--SGNPLS 130

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
            LPE       +  L +    L  L N+ I +   L  L   +NLL  +P ++  L +L 
Sbjct: 131 RLPEGFTQLRSLGHLALNDVSLQSLPND-IGNLANLVTLELRENLLKTLPTSLSFLVKLE 189

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           +LDL  N +  +P ++    +L E ++  N LSALP ELG L                  
Sbjct: 190 QLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLR----------------- 232

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
                RL  LD+S N L  LP E+  +  L  LLL+ N L  +   +      ++LK  +
Sbjct: 233 -----RLVCLDVSENKLEQLPNEVSGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQ 287

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +RL   E +E+    E+L            EL L    L+A+P  + +  ++T L++ RN
Sbjct: 288 NRL--TEVTESIGDCENLT-----------ELILTENMLTALPKSLGKLTKLTNLNVDRN 334

Query: 391 SIQELPPELSSCASLQV 407
            +  LP E+  CA+L V
Sbjct: 335 RLTSLPAEIGGCANLNV 351


>gi|124002073|ref|ZP_01686927.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992539|gb|EAY31884.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 506

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 180/388 (46%), Gaps = 61/388 (15%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L KL L  N +  L  ++ NL  L  L ++ N+LS L A IG L  L+ L+++ N ++ 
Sbjct: 129 NLYKLRLNRNELTILPAEIGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVA 188

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG  T L K +  SNQL  LP+ +    +L +    NN  T+LP ++   S +  L
Sbjct: 189 LPAEIGKLTQLKKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFL 248

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS-------------LSRL--- 209
            V  N+L  L +  I + T L EL   +N L  +P  IG+             LS L   
Sbjct: 249 YVSDNQLATLPSE-IGNLTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSELPTE 307

Query: 210 ------IR-LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
                 +R L L +N + ++P++I     L E  +  N L ALP E+  L  L TLD+  
Sbjct: 308 IGLVGDLRILCLEENLLTTLPNTIGQLKCLEELRIWKNDLVALPLEIDSLKNLHTLDISF 367

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L  + ++  QL  L  L+++ N L+ LP EI ++  L +L L GN L +L + L    
Sbjct: 368 NKLSTFPLQITQLEGLQKLNVAENGLTDLPDEINQLVKLEELNLGGNNLTSLPAGL---- 423

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
             A L+ L++                              L L    L  +PSE++    
Sbjct: 424 --AKLQKLQN------------------------------LDLRYNELEVLPSEVFALSN 451

Query: 382 ITKLDLSRNSIQELPPELSSCASLQVKF 409
           + +L+L  N +  +P E++    LQ  +
Sbjct: 452 LQELNLMGNYLTTIPVEITKLKKLQYLY 479



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 181/373 (48%), Gaps = 20/373 (5%)

Query: 49  KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
           KL L++ +I  L  ++  L  L  L+     L+ LP  +G L  L  L ++ N +  +P 
Sbjct: 86  KLNLSYKHISVLPAEIAGLTHLQKLDCMAIGLTILPPEVGALTNLYKLRLNRNELTILPA 145

Query: 109 EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           EIG+ T L +   + N+L  L + +G    L   + + N + +LP ++   +++ KL+V 
Sbjct: 146 EIGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVALPAEIGKLTQLKKLEVG 205

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+LT L    I+  T L EL    N    +P  IG+LS L  L +  N++ ++PS I  
Sbjct: 206 SNQLTTLPAE-ISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFLYVSDNQLATLPSEIGN 264

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSL 287
             +L E Y+  N L ALPAE+G L  L  L L SNQL E   E   +  L +L L  N L
Sbjct: 265 LTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSELPTEIGLVGDLRILCLEENLL 324

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLR---SSLVNGPT-----------PALLKYLRSRL 333
           + LP  IG++  L +L +  N L  L     SL N  T           P  +  L    
Sbjct: 325 TTLPNTIGQLKCLEELRIWKNDLVALPLEIDSLKNLHTLDISFNKLSTFPLQITQLEGLQ 384

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
             N      T   D I    +L    +EL+L G NL+++P+ + +  ++  LDL  N ++
Sbjct: 385 KLNVAENGLTDLPDEINQLVKL----EELNLGGNNLTSLPAGLAKLQKLQNLDLRYNELE 440

Query: 394 ELPPELSSCASLQ 406
            LP E+ + ++LQ
Sbjct: 441 VLPSEVFALSNLQ 453



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 124/273 (45%), Gaps = 38/273 (13%)

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             N +    S   I+ LP ++A  + + KLD     LT+L    + + T L +L  ++N 
Sbjct: 81  VFNQAKLNLSYKHISVLPAEIAGLTHLQKLDCMAIGLTILPPE-VGALTNLYKLRLNRNE 139

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG+L++L  L +  NR+ ++ + I     L +  +  N L ALPAE+GKL++L
Sbjct: 140 LTILPAEIGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVALPAEIGKLTQL 199

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L++ SNQL     E   L  L  L + NN  + LP EIG ++ L+ L ++ N L TL 
Sbjct: 200 KKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFLYVSDNQLATLP 259

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           S + N                                      T +EL +E   L A+P+
Sbjct: 260 SEIGN------------------------------------LTTLQELYIEENQLIALPA 283

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           EI     +  L L  N + ELP E+     L++
Sbjct: 284 EIGTLQSLQLLHLQSNQLSELPTEIGLVGDLRI 316



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 115/274 (41%), Gaps = 47/274 (17%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L + +N    L  ++  L  L  L VS N+L+ LP+ IG L  L+ L +  N ++ +
Sbjct: 222 LEELYIDNNQFTTLPTEIGTLSNLKFLYVSDNQLATLPSEIGNLTTLQELYIEENQLIAL 281

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLG-------------------------RCL---- 137
           P EIG+  +L      SNQL ELP+ +G                         +CL    
Sbjct: 282 PAEIGTLQSLQLLHLQSNQLSELPTEIGLVGDLRILCLEENLLTTLPNTIGQLKCLEELR 341

Query: 138 -----------------NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
                            NL     S N +++ P  +     + KL+V  N LT L +  I
Sbjct: 342 IWKNDLVALPLEIDSLKNLHTLDISFNKLSTFPLQITQLEGLQKLNVAENGLTDLPDE-I 400

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
                L EL    N L  +P  +  L +L  LDL  N +  +PS +    +L E  +  N
Sbjct: 401 NQLVKLEELNLGGNNLTSLPAGLAKLQKLQNLDLRYNELEVLPSEVFALSNLQELNLMGN 460

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
            L+ +P E+ KL KL  L L    + E  +E  +
Sbjct: 461 YLTTIPVEITKLKKLQYLYLQHGLISEQELERVK 494



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 58/201 (28%)

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           +L+L    I  +P+ I+G   L +       L+ LP E+G L+ L  L L+ N+L     
Sbjct: 86  KLNLSYKHISVLPAEIAGLTHLQKLDCMAIGLTILPPEVGALTNLYKLRLNRNEL----- 140

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
                            + LP EIG +T L++L +T N L  L + + N           
Sbjct: 141 -----------------TILPAEIGNLTKLQELYITDNRLSALSAEIGN----------- 172

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
                                 T+L    ++L L    L A+P+EI +  ++ KL++  N
Sbjct: 173 ---------------------LTQL----QKLELAVNRLVALPAEIGKLTQLKKLEVGSN 207

Query: 391 SIQELPPELSSCASLQVKFSD 411
            +  LP E+S   SL+  + D
Sbjct: 208 QLTTLPAEISGLTSLEELYID 228


>gi|456987322|gb|EMG22649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 305

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 133/265 (50%), Gaps = 23/265 (8%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S N+L  LP  I +L  L+ L +++N +   P EI    +L K   S+NQL  LP 
Sbjct: 1   MLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPV 60

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT---------------VLS 176
            +G+  NL +    NN + ++ +++     + KL ++ N+LT                LS
Sbjct: 61  EIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLS 120

Query: 177 NNLIASWTM-------LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           NN + ++         L EL  S N L   P+ IG L +L  L L  N++ +IP+ I   
Sbjct: 121 NNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKL 180

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
             L E  +  N L+ +P E+G+L  L  L L  NQ K   VE  QL+ L +L L  N L+
Sbjct: 181 QKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLT 240

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTL 313
            LP EIGK+  L+ L L  N L T+
Sbjct: 241 ALPKEIGKLKNLKMLNLDANQLTTI 265



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 132/264 (50%), Gaps = 2/264 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L +N +    +++  L  L  L +S+N+L+ LP  IG+L  L+ L++  N +  
Sbjct: 21  NLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKT 80

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           I  EI     L K    +NQL  L   +G+  NL     SNN +T+ P+++     + +L
Sbjct: 81  ISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQEL 140

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT      I     L  L    N L  +P  IG L +L  L+L  N++ +IP  
Sbjct: 141 YLSNNQLTTFPKE-IGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKE 199

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++  N    +P E G+L  L  L L +NQL     E  +L+ L +L+L  
Sbjct: 200 IGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDA 259

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGN 308
           N L+ +P EIG++  L+ L L  N
Sbjct: 260 NQLTTIPKEIGQLQNLQTLYLRNN 283



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 30/260 (11%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L +N ++ + +++  L  L  L + +N+L+ L   IG+L  LKSL +S N +  
Sbjct: 67  NLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTT 126

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L +   S+NQL   P  +G+   L      +N +T++P ++    K+ +L
Sbjct: 127 FPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQEL 186

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ N+LT                         +P+ IG L  L  L L  N+  +IP  
Sbjct: 187 NLDVNQLTT------------------------IPKEIGQLQNLQVLFLSYNQFKTIPVE 222

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
                +L    +  N L+ALP E+GKL  L  L+L +NQL     E  QL+ L  L L N
Sbjct: 223 FGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRN 282

Query: 285 NSLSGLPPEIGKMTTLRKLL 304
           N  S     I +   +RKLL
Sbjct: 283 NQFS-----IEEKERIRKLL 297



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 144/338 (42%), Gaps = 64/338 (18%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S NQL  LP  + +  NL +   + N +T+ P+++     + KL +  N+LT+L   
Sbjct: 2   LDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTIL--- 58

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                                P  IG L  L  L+L  N++ +I   I    +L + Y+ 
Sbjct: 59  ---------------------PVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLD 97

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKM 297
           NN L+AL  E+GKL  L +L L +NQL  +  E  +L+ L  L LSNN L+  P EIGK+
Sbjct: 98  NNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKL 157

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L+ L L  N L T+         P  +  L+     N D    TT    I     L V
Sbjct: 158 QKLQWLGLGDNQLTTI---------PNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQV 208

Query: 358 TS-------------------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
                                K LSL+   L+A+P EI +   +  L+L  N +  +P E
Sbjct: 209 LFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKE 268

Query: 399 LSSCASLQV------KFSDLVTNKE---SCISGCYLYW 427
           +    +LQ       +FS  +  KE     +  C +Y+
Sbjct: 269 IGQLQNLQTLYLRNNQFS--IEEKERIRKLLPKCQIYF 304



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 13/163 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL LSN  L   P E+ K               +LQ+L L++N +    +++  L  L  
Sbjct: 116 SLFLSNNQLTTFPKEIGK-------------LQNLQELYLSNNQLTTFPKEIGKLQKLQW 162

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+L+ +P  IG+L  L+ L++  N +  IP EIG    L     S NQ K +P  
Sbjct: 163 LGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVE 222

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
            G+  NL       N +T+LP+++     +  L+++ N+LT +
Sbjct: 223 FGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTI 265



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 13/162 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L LSN  L   P E+       G+  K      LQ L L  N +  +  ++  L  L  
Sbjct: 139 ELYLSNNQLTTFPKEI-------GKLQK------LQWLGLGDNQLTTIPNEIGKLQKLQE 185

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L+ +P  IG+L  L+ L +S+N    IP E G    L      +NQL  LP  
Sbjct: 186 LNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKE 245

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +G+  NL       N +T++P+++     +  L +  N+ ++
Sbjct: 246 IGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQFSI 287


>gi|390339446|ref|XP_003725006.1| PREDICTED: protein scribble homolog [Strongylocentrotus purpuratus]
          Length = 434

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/329 (30%), Positives = 162/329 (49%), Gaps = 36/329 (10%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LS+  L  +P E+  NF            ++L +L ++ N+I ++ ++++    LT++
Sbjct: 31  LGLSDNELERLPAEI-GNF------------MNLLELDVSRNDIMEIPDNIKFCKALTIV 77

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           + S N LS LP    +LH L+ L ++  S+  +P +IGS + L+  +   N LK LP SL
Sbjct: 78  DFSGNPLSRLPPGFTQLHDLRHLTLNDVSLESLPQDIGSMSNLIAMELRENLLKVLPDSL 137

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL----------------SN 177
              + L      +N +  LPE L     +S+L ++ N+LT+L                 N
Sbjct: 138 SFLVKLETLDLGSNELEELPETLGALPNLSELWLDCNQLTILPPEIGNLGNLTCLDVSEN 197

Query: 178 NL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           NL      I     LT+L  S+N L  +PE IG L  L  L + QNR++++  +I  C +
Sbjct: 198 NLQCLPDEIGGLQSLTDLTLSQNCLEKLPEGIGKLKDLSILKIDQNRLITLTPAIGSCEN 257

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGL 290
           + E  +  N L  +P  +G L  L   ++  N+L +   +  +  RL VL L +N L  L
Sbjct: 258 MQELILTENLLQEIPPTIGSLRHLNNFNVDRNRLTQLPAQIGKCTRLGVLSLRDNRLLRL 317

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           PPE+G++  L  L + GN L  L   L N
Sbjct: 318 PPELGQLRELHVLDVCGNRLDWLPIQLAN 346



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 110/334 (32%), Positives = 161/334 (48%), Gaps = 15/334 (4%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L +L +S N+L  LPA IG    L  LDVS N IM+IPD I    AL   D S N L  L
Sbjct: 28  LRILGLSDNELERLPAEIGNFMNLLELDVSRNDIMEIPDNIKFCKALTIVDFSGNPLSRL 87

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    +  +L     ++  + SLP+D+   S +  +++  N L VL ++L +    L  L
Sbjct: 88  PPGFTQLHDLRHLTLNDVSLESLPQDIGSMSNLIAMELRENLLKVLPDSL-SFLVKLETL 146

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N L  +PET+G+L  L  L L  N++  +P  I    +L    +  N L  LP E+
Sbjct: 147 DLGSNELEELPETLGALPNLSELWLDCNQLTILPPEIGNLGNLTCLDVSENNLQCLPDEI 206

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G L  L  L L  N L++      +L+ LS+L +  N L  L P IG    +++L+LT N
Sbjct: 207 GGLQSLTDLTLSQNCLEKLPEGIGKLKDLSILKIDQNRLITLTPAIGSCENMQELILTEN 266

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L+ +       PT   L++L +    N D    T     I   TRL V    LSL    
Sbjct: 267 LLQEI------PPTIGSLRHLNNF---NVDRNRLTQLPAQIGKCTRLGV----LSLRDNR 313

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           L  +P E+ +  E+  LD+  N +  LP +L++C
Sbjct: 314 LLRLPPELGQLRELHVLDVCGNRLDWLPIQLANC 347



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 120/242 (49%), Gaps = 24/242 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N +E+L E L  LP L+ L +  N+L+ LP  IG L  L  LDVS N++ 
Sbjct: 141 VKLETLDLGSNELEELPETLGALPNLSELWLDCNQLTILPPEIGNLGNLTCLDVSENNLQ 200

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PDEIG   +L                       +D   S NC+  LPE +     +S 
Sbjct: 201 CLPDEIGGLQSL-----------------------TDLTLSQNCLEKLPEGIGKLKDLSI 237

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L ++ N+L  L+   I S   + ELI ++NLL  +P TIGSL  L   ++ +NR+  +P+
Sbjct: 238 LKIDQNRLITLTPA-IGSCENMQELILTENLLQEIPPTIGSLRHLNNFNVDRNRLTQLPA 296

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I  C  L    + +N L  LP ELG+L +L  LD+  N+L    ++     L  L LS 
Sbjct: 297 QIGKCTRLGVLSLRDNRLLRLPPELGQLRELHVLDVCGNRLDWLPIQLANCNLKALWLSE 356

Query: 285 NS 286
           N 
Sbjct: 357 NQ 358



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 134/289 (46%), Gaps = 19/289 (6%)

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S N+L+ LP+ +G  +NL +   S N I  +P+++  C  ++ +D  GN L+ L      
Sbjct: 34  SDNELERLPAEIGNFMNLLELDVSRNDIMEIPDNIKFCKALTIVDFSGNPLSRLPPGF-T 92

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L  L  +   L  +P+ IGS+S LI ++L +N +  +P S+S    L    +G+N 
Sbjct: 93  QLHDLRHLTLNDVSLESLPQDIGSMSNLIAMELRENLLKVLPDSLSFLVKLETLDLGSNE 152

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTL 300
           L  LP  LG L  L  L L  NQL     E   L  L+ LD+S N+L  LP EIG + +L
Sbjct: 153 LEELPETLGALPNLSELWLDCNQLTILPPEIGNLGNLTCLDVSENNLQCLPDEIGGLQSL 212

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS- 359
             L L+ N L  L   +      ++LK  ++RL               IT+   +     
Sbjct: 213 TDLTLSQNCLEKLPEGIGKLKDLSILKIDQNRL---------------ITLTPAIGSCEN 257

Query: 360 -KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +EL L    L  IP  I     +   ++ RN + +LP ++  C  L V
Sbjct: 258 MQELILTENLLQEIPPTIGSLRHLNNFNVDRNRLTQLPAQIGKCTRLGV 306



 Score = 41.6 bits (96), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 39/171 (22%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEI 294
           + +N L  LPAE+G    L  LD+  N + E    ++ C+  L+++D S N LS LPP  
Sbjct: 33  LSDNELERLPAEIGNFMNLLELDVSRNDIMEIPDNIKFCK-ALTIVDFSGNPLSRLPPGF 91

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATR 354
            ++  LR L L    L +L   +                          +  +LI M  R
Sbjct: 92  TQLHDLRHLTLNDVSLESLPQDI-------------------------GSMSNLIAMELR 126

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            ++           L  +P  +    ++  LDL  N ++ELP  L +  +L
Sbjct: 127 ENL-----------LKVLPDSLSFLVKLETLDLGSNELEELPETLGALPNL 166


>gi|357625551|gb|EHJ75953.1| putative Erbb2 interacting protein isoform 2 [Danaus plexippus]
          Length = 722

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 181/393 (46%), Gaps = 27/393 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL DVP EV+            +E   L+ L+   N I +L   L     L  L
Sbjct: 19  LDYSHHSLTDVPTEVF-----------VYERT-LETLLCQSNRITELPRQLFMCHGLKYL 66

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N+L  +P AI  L  L+ L++S N++  IPD + S   L+  D S N L++LP ++
Sbjct: 67  DLSDNELQAIPTAISSLVNLQHLNLSRNTLASIPDNMKSLKNLMFLDLSVNPLEKLPETI 126

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
              + + D   ++  +  LP +    + +  L++  N L +L  +L  S T L  L   +
Sbjct: 127 TNLIAMQDLYLNDTYLEYLPGNFGRLANLRILELRDNYLMILPKSLSRS-TDLLRLDIGQ 185

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N     PE IG  S+L  L +  N    IP+ I    +L      NN +  L  E+G  S
Sbjct: 186 NEFQQFPEVIGRFSKLKELWIDSNSFTIIPAVIKPLDNLIHLEASNNMIEELAPEIGYCS 245

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           +L  L L  N L +      QL  L+ L L NN L  +P  IG++  L +L+L  N +  
Sbjct: 246 RLEDLTLSVNSLTQLPDTIGQLSNLTALKLDNNRLYSIPESIGQLKNLEELMLMSNYIDK 305

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L SS+       LL+ L+     N D          I    +LSV    LS+    L+ I
Sbjct: 306 LPSSI------GLLRKLQYL---NVDENMLRVIPPEIGSCAKLSV----LSVRSNKLTKI 352

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           P EI     +  L+L RNS+  LP  L +C +L
Sbjct: 353 PPEIGHLTSLRVLNLVRNSLSYLPQSLLNCDNL 385



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 1/223 (0%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           + DL +L +  N  ++  E +     L  L +  N  + +PA I  L  L  L+ S N I
Sbjct: 175 STDLLRLDIGQNEFQQFPEVIGRFSKLKELWIDSNSFTIIPAVIKPLDNLIHLEASNNMI 234

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
            ++  EIG  + L     S N L +LP ++G+  NL+  K  NN + S+PE +     + 
Sbjct: 235 EELAPEIGYCSRLEDLTLSVNSLTQLPDTIGQLSNLTALKLDNNRLYSIPESIGQLKNLE 294

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +L +  N +  L ++ I     L  L   +N+L  +P  IGS ++L  L +  N++  IP
Sbjct: 295 ELMLMSNYIDKLPSS-IGLLRKLQYLNVDENMLRVIPPEIGSCAKLSVLSVRSNKLTKIP 353

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             I    SL    +  N+LS LP  L     L  L L  NQ K
Sbjct: 354 PEIGHLTSLRVLNLVRNSLSYLPQSLLNCDNLVALWLSENQSK 396



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 115/261 (44%), Gaps = 19/261 (7%)

Query: 152 LPEDLADCSK-----MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           +P D   C +     + +LD   + LT +   +      L  L+   N +  +P  +   
Sbjct: 1   MPFDFLCCVRPGVEDIVELDYSHHSLTDVPTEVFVYERTLETLLCQSNRITELPRQLFMC 60

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  LDL  N + +IP++IS   +L    +  N L+++P  +  L  L  LDL  N L+
Sbjct: 61  HGLKYLDLSDNELQAIPTAISSLVNLQHLNLSRNTLASIPDNMKSLKNLMFLDLSVNPLE 120

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           +       L  +  L L++  L  LP   G++  LR L L  N L  L  SL        
Sbjct: 121 KLPETITNLIAMQDLYLNDTYLEYLPGNFGRLANLRILELRDNYLMILPKSLSRS----- 175

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
              LR  + +NE  +      ++I   ++L    KEL ++  + + IP+ I     +  L
Sbjct: 176 TDLLRLDIGQNEFQQFP----EVIGRFSKL----KELWIDSNSFTIIPAVIKPLDNLIHL 227

Query: 386 DLSRNSIQELPPELSSCASLQ 406
           + S N I+EL PE+  C+ L+
Sbjct: 228 EASNNMIEELAPEIGYCSRLE 248



 Score = 38.1 bits (87), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 10/127 (7%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDE----AGEGDKWWEAV----DLQKLILAHNNIEKLKE 62
           +L L N  L  +P  +   KN +E    +   DK   ++     LQ L +  N +  +  
Sbjct: 272 ALKLDNNRLYSIPESIGQLKNLEELMLMSNYIDKLPSSIGLLRKLQYLNVDENMLRVIPP 331

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++ +   L+VL+V  NKL+++P  IG L  L+ L++  NS+  +P  + +   LV    S
Sbjct: 332 EIGSCAKLSVLSVRSNKLTKIPPEIGHLTSLRVLNLVRNSLSYLPQSLLNCDNLVALWLS 391

Query: 123 SNQLKEL 129
            NQ K L
Sbjct: 392 ENQSKPL 398


>gi|148697570|gb|EDL29517.1| scribbled homolog (Drosophila), isoform CRA_d [Mus musculus]
          Length = 965

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 167/365 (45%), Gaps = 61/365 (16%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           + I + +R+   L L    LR++P   ++              ++L+KL L+ N I++L 
Sbjct: 86  EEIYRYSRSLEELLLDANQLRELPKPFFR-------------LLNLRKLGLSDNEIQRLP 132

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            ++ N   L  L+VS N + E+P +I     L+  D S N + ++PD      +L     
Sbjct: 133 PEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLAL 192

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A
Sbjct: 193 NDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGA 252

Query: 182 --------------------------------SWTMLTEL-------------IASKNLL 196
                                           S   L EL             + S+NLL
Sbjct: 253 LPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLL 312

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +PE IG L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL 
Sbjct: 313 QRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLT 372

Query: 257 TLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
            L++  N L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L 
Sbjct: 373 NLNVDRNHLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLP 431

Query: 315 SSLVN 319
            +L +
Sbjct: 432 FALTH 436



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 103 NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 162

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 163 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 219

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 220 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 279

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 280 VCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL-------------- 325

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 326 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPH 363

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 364 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 396



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 126/242 (52%), Gaps = 1/242 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L  L L  N ++ L   L  L  L  L++  N L  LP  +G L  L+ L +  N + 
Sbjct: 208 ANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLS 267

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+G+   LV  D S N+L+ELP  LG    L+D   S N +  LPE +    ++S 
Sbjct: 268 ALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSI 327

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+L  ++   I     L+ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 328 LKVDQNRLCEVTE-AIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 386

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 387 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 446

Query: 285 NS 286
           N 
Sbjct: 447 NQ 448


>gi|455790935|gb|EMF42777.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 423

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 190/407 (46%), Gaps = 51/407 (12%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           +++ L+      +L+LS   L+ +PN++              +  +LQKL L  N    L
Sbjct: 33  LEKALQNPADVRNLDLSFLGLKTLPNKI-------------GQLKNLQKLDLGGNEPTIL 79

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
            +++  L  L  LN+++NKL+ LP  IG+L  L+ L +  N ++ +P EIG    L K +
Sbjct: 80  SKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLN 139

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
             +N+L  LP  +G+  NL +    +N + SLP ++     +  LD+  N+ T +S  ++
Sbjct: 140 LDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVM 199

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
              T L  L    N L  +P+ I  L  L  L L  N++ S+P  I    +L    +G N
Sbjct: 200 LLET-LENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGEN 258

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTT 299
                P E+ +L  L  L+L+ NQL E+  E  QL+ L  L L +N ++ LP E+ ++  
Sbjct: 259 RFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPD 318

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L++L L+GN +  L   ++       LK L                              
Sbjct: 319 LQELHLSGNKITILPKEILQ------LKNLEW---------------------------- 344

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             LSL    L+A+P EI +  ++ +L+L  N +  LP E+    +LQ
Sbjct: 345 --LSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQ 389



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 37/213 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P  IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L LHSN+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L 
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL- 171

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                   P  ++ L+S                            K L L     + +  
Sbjct: 172 --------PTEIEQLKSL---------------------------KNLDLNHNEFTTVSK 196

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           E+     +  LDL  N ++ +P E+    SL+V
Sbjct: 197 EVMLLETLENLDLRSNKLKTIPKEIRQLKSLKV 229



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 65/120 (54%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N + +  +++  L  L  L++ HN+++ LP  + +L  L+ L +S N I  +P EI   
Sbjct: 280 YNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L     S+N+L  LP  +G+   L   +  NN +T+LP+++     + +L+++ N ++
Sbjct: 340 KNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|348524302|ref|XP_003449662.1| PREDICTED: protein LAP2 [Oreochromis niloticus]
          Length = 1352

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 154/331 (46%), Gaps = 37/331 (11%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+ S+ SL  VP E++ NF++            LQ+L L  N IE+L + L N  LL  
Sbjct: 31  SLDYSHCSLETVPKEIF-NFEKT-----------LQELYLDANQIEELPKQLFNCQLLNR 78

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE---- 128
           L++  N L+ LPAAI  L  L+ LDVS NSI   P+ I +   L   + S N + +    
Sbjct: 79  LSMPDNDLTVLPAAIANLINLRELDVSKNSIQDFPENIKNCKGLAIVEASVNPISKLPEG 138

Query: 129 -------------------LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                              LP+S GR   L   +   N +  LP+ +   +++ +LD+  
Sbjct: 139 FTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMQKLTQLERLDLGS 198

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+ T +   ++   T L EL    N L  +P  +G+L +L+ LD+ +N +  +   I GC
Sbjct: 199 NEFTEVP-EVVEQLTGLKELWMDGNKLTFLPGMLGTLKQLVYLDVSKNNLEMVDEQICGC 257

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            +L +  + NNAL+ LP  +G L KL  L +  NQL         L  +  LD S N + 
Sbjct: 258 ENLQDLLLSNNALTQLPGSIGTLKKLTALKVDENQLMYLPDSIGGLTCIDELDCSFNEIE 317

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            LP  IG+   +R      N L  L   + N
Sbjct: 318 ALPATIGQCVNMRTFAADHNFLAQLPPEMGN 348



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 96/191 (50%), Gaps = 24/191 (12%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L ++ NN+E + E +     L  L +S+N L++LP +IG L  L +L V  N +M +PD 
Sbjct: 240 LDVSKNNLEMVDEQICGCENLQDLLLSNNALTQLPGSIGTLKKLTALKVDENQLMYLPDS 299

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           IG  T + + DCS N+++ LP+++G+C+N+  F A +N +  LP ++ +           
Sbjct: 300 IGGLTCIDELDCSFNEIEALPATIGQCVNMRTFAADHNFLAQLPPEMGN----------- 348

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
                        W   T L    N L  +PE +G + +L  ++L  N++ ++P S +  
Sbjct: 349 -------------WKRATVLFLHSNKLESLPEEMGDMQKLKVINLSNNKLKNLPYSFTKL 395

Query: 230 CSLAEFYMGNN 240
             L   ++  N
Sbjct: 396 TELTAMWLSEN 406



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 127/319 (39%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++ SLD S  S+  +P EI        F+ +                L +     N
Sbjct: 24  GEEEIVTSLDYSHCSLETVPKEI------FNFEKT----------------LQELYLDAN 61

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  +++L +  N LTVL    IA+   L EL  SKN +   PE I +  
Sbjct: 62  QIEELPKQLFNCQLLNRLSMPDNDLTVLPA-AIANLINLRELDVSKNSIQDFPENIKNCK 120

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   SL + Y+ +  L  LPA  G+L+KL            
Sbjct: 121 GLAIVEASVNPISKLPEGFTQLLSLTQLYLNDAFLEFLPASFGRLTKL------------ 168

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                      +L+L  N L  LP  + K+T L +L L  N                   
Sbjct: 169 ----------QILELRENQLKMLPKSMQKLTQLERLDLGSN------------------- 199

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                    E +E     E L  +        KEL ++G  L+ +P  +    ++  LD+
Sbjct: 200 ---------EFTEVPEVVEQLTGL--------KELWMDGNKLTFLPGMLGTLKQLVYLDV 242

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N+++ +  ++  C +LQ
Sbjct: 243 SKNNLEMVDEQICGCENLQ 261


>gi|426342830|ref|XP_004038035.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Gorilla gorilla gorilla]
          Length = 560

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 183/396 (46%), Gaps = 36/396 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L    L+++P  + KN               L+ L L  N+++ L +++ N   L  +
Sbjct: 123 LRLYQTDLKEIPVVICKNLHH------------LELLGLTGNHLKCLPKEIVNQTKLREI 170

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+    P  +  L+ L+ +D+  N I  IP+EIG  T L KF  +SN L  LP+SL
Sbjct: 171 YLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGHLTGLQKFHMASNNLPVLPASL 230

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +C  LS    S+N + S+P+ LA+  KM+++ + GN+L  +   LI  WT L  L    
Sbjct: 231 CQCSQLSVLDLSHNLLHSIPKSLAELRKMTEIGLSGNRLEKVP-RLICRWTSLHLLYLGN 289

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
             L+ +P +   L  L  LDL QN +   P  I    +L    + +N +  LP+ELG LS
Sbjct: 290 TGLHRLPGSFRCLINLRFLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLS 349

Query: 254 KLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           KL  L L  N+   +  E   L    +L +       L+ +P  I K+ +L++L +  N 
Sbjct: 350 KLKILGLTGNEFLSFPEEVLSLASLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNH 409

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE--DLITMATRLSVTSKELSLEGM 367
           L  L  SL + P   +L           D   +  K+  D I  A  L    KEL LE  
Sbjct: 410 LEYLPVSLGSMPNLEVL-----------DCRHNLLKQLPDAICQAQAL----KELRLEDN 454

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            L+ +P  +     +  L L  N ++E P E+  CA
Sbjct: 455 LLTHLPENLDSLVNLKVLTLMDNPMEEPPKEV--CA 488



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 152/339 (44%), Gaps = 13/339 (3%)

Query: 70  LTVLNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           L  L +    L E+P  I + LH L+ L ++ N +  +P EI + T L +     NQ + 
Sbjct: 120 LRELRLYQTDLKEIPVVICKNLHHLELLGLTGNHLKCLPKEIVNQTKLREIYLKRNQFEV 179

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
            P  L     L       N I ++PE++   + + K  +  N L VL  +L    + L+ 
Sbjct: 180 FPQELCVLYTLEIIDLDENKIGAIPEEIGHLTGLQKFHMASNNLPVLPASL-CQCSQLSV 238

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S NLL+ +P+++  L ++  + L  NR+  +P  I    SL   Y+GN  L  LP  
Sbjct: 239 LDLSHNLLHSIPKSLAELRKMTEIGLSGNRLEKVPRLICRWTSLHLLYLGNTGLHRLPGS 298

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
              L  L  LDL  N L    ++ C L+ L VL L +N +  LP E+G ++ L+ L LTG
Sbjct: 299 FRCLINLRFLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTG 358

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N         ++ P   L      +L   +D     T    +    R   + KEL +E  
Sbjct: 359 N-------EFLSFPEEVLSLASLEKLYIGQDQGFKLT---YVPEHIRKLQSLKELYIENN 408

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +L  +P  +     +  LD   N +++LP  +    +L+
Sbjct: 409 HLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQALK 447



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 87/226 (38%), Gaps = 39/226 (17%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           R   +D     + +IP  I     L E ++ NN +  +P E+ +L  +  L L  N L+ 
Sbjct: 26  RTFFIDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRS 85

Query: 268 YC-------------------------VEACQLRLSVLDLSNNSLSGLPPEIGK-MTTLR 301
            C                         V +    L  L L    L  +P  I K +  L 
Sbjct: 86  LCPALGLLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVICKNLHHLE 145

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L LTGN L+ L   +VN  T     YL+        ++     ++L  + T L +    
Sbjct: 146 LLGLTGNHLKCLPKEIVNQ-TKLREIYLKR-------NQFEVFPQELCVLYT-LEI---- 192

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           + L+   + AIP EI     + K  ++ N++  LP  L  C+ L V
Sbjct: 193 IDLDENKIGAIPEEIGHLTGLQKFHMASNNLPVLPASLCQCSQLSV 238


>gi|260789701|ref|XP_002589884.1| hypothetical protein BRAFLDRAFT_235861 [Branchiostoma floridae]
 gi|229275068|gb|EEN45895.1| hypothetical protein BRAFLDRAFT_235861 [Branchiostoma floridae]
          Length = 341

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 162/339 (47%), Gaps = 15/339 (4%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +  DL+ L L+ N +  + E +  L  L  L+   NKL+ LP  I  L  L+ L +  N+
Sbjct: 1   DITDLEYLDLSKNKLTTIHESIGRLQKLYRLDADDNKLTSLPQKIASLQNLEELYLQTNT 60

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           + ++P E+G    L     + NQL  LP+S+    NL    ASNN ++ LP        +
Sbjct: 61  LTELPSEVGELKKLGWLYINDNQLVTLPASICSLRNLKMLVASNNELSELPAGFEQLQNL 120

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           +KL V GNKLT LS+  + S   L  ++ S N L+ +PE +  L  L  L +  N+   +
Sbjct: 121 TKLYVGGNKLTELSSG-VCSLQHLETVVVSNNKLSTLPEGVERLKNLTELYIDGNQFREL 179

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P  +    +L    +G N +  LP E+  L +L +L + S Q +E+      L +L  L 
Sbjct: 180 PLGVCSLSNLEVLVVGPNPIRFLPDEIKNLIRLKSLTIISCQFEEFPRPIGDLEQLRYLA 239

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           LSNN LS LPP + K+  LR + L  N  +T    L + P   ++    +R+ +   S  
Sbjct: 240 LSNNKLSALPPTMDKLKRLRDVYLYENKFKTFPEVLCSLPKLMVVDIRNNRISKIPSS-- 297

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAG 380
                  ++  +RL    K L + G  L   P+++ E G
Sbjct: 298 -------LSHLSRL----KRLVVAGNPLKYPPADVCEKG 325


>gi|38566048|gb|AAH62888.1| Scrib protein [Mus musculus]
          Length = 1612

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTEL-------------IASKNLLNGMPETI 203
                                    S   L EL             + S+NLL  +PE I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 323 HLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTH 379



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPH 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|359726570|ref|ZP_09265266.1| hypothetical protein Lwei2_06132 [Leptospira weilii str.
           2006001855]
          Length = 540

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 128/252 (50%), Gaps = 2/252 (0%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L + L+N   + VLN+S  +L+ LP  IG+L  L+ L + +N ++ IP EIG    L   
Sbjct: 32  LTKALQNPSKVRVLNLSGQELATLPKEIGQLQNLQELYLQWNQLIAIPKEIGQLQNLQTL 91

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D   NQL   P  +     L     S N +  LP ++     +  L +  NKLT L    
Sbjct: 92  DLRDNQLVTFPKEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTLPKE- 150

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L EL +  N L  +P+ IG L  L  L+L  NR+ ++P  I    +L    + +
Sbjct: 151 IGQLQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRD 210

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G+L  L TL+L +N+L  +  E  QL+ L  L+L NN L+  P EIG++ 
Sbjct: 211 NQLIILPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQ 270

Query: 299 TLRKLLLTGNPL 310
            LR L L  NPL
Sbjct: 271 NLRDLELLINPL 282



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 161/370 (43%), Gaps = 82/370 (22%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L    N +  L +++  L  L  LN+++N+L+ LP  IG+L  L++LD+  N ++ 
Sbjct: 156 NLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLII 215

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +  +N+L   P  +G+  NL      NN +T+ P+++     +  L
Sbjct: 216 LPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLRDL 275

Query: 166 DVEGNKLTVLSNNLIA----------------------------------------SWTM 185
           ++  N L++     I                                         S++ 
Sbjct: 276 ELLINPLSLKERKRIQKLFPNSNLDLREVAKDGVYHNLNLAQEEPLQVLELSIAYKSFSQ 335

Query: 186 L--TELIASKNL---------LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L   E++  +NL            +P+ IG L  L  L L  N + ++PS+I    +L  
Sbjct: 336 LFPKEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQLRNLRG 395

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------------------- 275
             +  N L +LP E+ +L  L TL LH N+LK +  E  QL                   
Sbjct: 396 LNLEANLLESLPKEIARLRNLHTLRLHQNKLKTFPKEILQLGKLQKLDLSANELKILPEE 455

Query: 276 -----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
                 L  LDLS+N L+ LP EI K+  L++L L GN L TL S +        LK L+
Sbjct: 456 LERLQNLQELDLSHNQLTILPKEIAKLQNLQELHLNGNQLTTLPSEI------GFLKKLK 509

Query: 331 S-RLPENEDS 339
             RL +NE S
Sbjct: 510 ILRLYQNEFS 519



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 121/264 (45%), Gaps = 38/264 (14%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV----------DLQKLILAHNNIEKLK 61
           LNLS + L  +P E+   +N  E     +W + +          +LQ L L  N +    
Sbjct: 45  LNLSGQELATLPKEIGQLQNLQELY--LQWNQLIAIPKEIGQLQNLQTLDLRDNQLVTFP 102

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           +++  L  L +L++S N+L  LPA IG L  L+SL +  N +  +P EIG    L +   
Sbjct: 103 KEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTLPKEIGQLQNLQELWS 162

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
             N+L  LP  +G+  NL     +NN +T+LP+++     +  LD+  N+L +L      
Sbjct: 163 PGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLIIL------ 216

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
                             P+ IG L  L  L+L  NR+ + P  I    +L    + NN 
Sbjct: 217 ------------------PKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNR 258

Query: 242 LSALPAELGKLSKLGTLDLHSNQL 265
           L+  P E+G+L  L  L+L  N L
Sbjct: 259 LTTFPKEIGQLQNLRDLELLINPL 282


>gi|443690437|gb|ELT92575.1| hypothetical protein CAPTEDRAFT_148907, partial [Capitella teleta]
          Length = 600

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 165/358 (46%), Gaps = 17/358 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L+L  N I +L      L  L  L +S N+++ LP  IG    L+ LD+S N I  I
Sbjct: 39  LEELLLDANQIRELPRGFFRLAQLRKLTLSDNEIARLPPDIGNFMSLQELDISRNDITDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ I     L   D S N L  LP    +  NL+    ++  +  LP D+   S +  L+
Sbjct: 99  PENIKFCRNLQVADFSCNPLSRLPDGFTQLRNLTHLGLNDVSLARLPPDIGSLSNLESLE 158

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N L  L ++L +    L  L    N+L  +PETIGSL  L  L L  N +  +P  I
Sbjct: 159 LRENLLKYLPSSL-SFLVKLKTLDLGSNVLEDLPETIGSLPSLEELWLDCNELSELPPEI 217

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSN 284
                L +  +  N L  LP E+  L  L  L L  N + EY  E      +LS+L +  
Sbjct: 218 GNLKRLTQIDVSENKLERLPDEMSGLLHLTDLILSQNSI-EYLPEGIGNLRKLSILKMDQ 276

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L  L P IG    +++L+LT N L  + +S+      A     R+RL E         
Sbjct: 277 NQLLHLTPAIGNCIAMQELILTENLLSDVPTSIGRMKLLANFNVDRNRLTE-------IP 329

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
           KE  I   ++L V    LSL    +  +PSEI    E+  LD+S N +Q LP  + SC
Sbjct: 330 KE--IGQCSKLGV----LSLRDNRVLYLPSEIGNLKELHVLDVSGNRLQHLPITMGSC 381



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 167/344 (48%), Gaps = 35/344 (10%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYK----------NFDEAGEGDKWWEAVDLQKLILA 53
           IL+  RT   L L    +R++P   ++          + + A         + LQ+L ++
Sbjct: 32  ILRYVRTLEELLLDANQIRELPRGFFRLAQLRKLTLSDNEIARLPPDIGNFMSLQELDIS 91

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
            N+I  + E+++    L V + S N LS LP    +L  L  L ++  S+ ++P +IGS 
Sbjct: 92  RNDITDIPENIKFCRNLQVADFSCNPLSRLPDGFTQLRNLTHLGLNDVSLARLPPDIGSL 151

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA----------DCSKMS 163
           + L   +   N LK LPSSL   + L      +N +  LPE +           DC+++S
Sbjct: 152 SNLESLELRENLLKYLPSSLSFLVKLKTLDLGSNVLEDLPETIGSLPSLEELWLDCNELS 211

Query: 164 KL-------------DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           +L             DV  NKL  L + + +    LT+LI S+N +  +PE IG+L +L 
Sbjct: 212 ELPPEIGNLKRLTQIDVSENKLERLPDEM-SGLLHLTDLILSQNSIEYLPEGIGNLRKLS 270

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            L + QN++L +  +I  C ++ E  +  N LS +P  +G++  L   ++  N+L E   
Sbjct: 271 ILKMDQNQLLHLTPAIGNCIAMQELILTENLLSDVPTSIGRMKLLANFNVDRNRLTEIPK 330

Query: 271 EACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           E  Q  +L VL L +N +  LP EIG +  L  L ++GN L+ L
Sbjct: 331 EIGQCSKLGVLSLRDNRVLYLPSEIGNLKELHVLDVSGNRLQHL 374



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 127/241 (52%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N ++ L   L  L  L  L++  N L +LP  IG L  L+ L +  N + +
Sbjct: 153 NLESLELRENLLKYLPSSLSFLVKLKTLDLGSNVLEDLPETIGSLPSLEELWLDCNELSE 212

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L + D S N+L+ LP  +   L+L+D   S N I  LPE + +  K+S L
Sbjct: 213 LPPEIGNLKRLTQIDVSENKLERLPDEMSGLLHLTDLILSQNSIEYLPEGIGNLRKLSIL 272

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+L  L+   I +   + ELI ++NLL+ +P +IG +  L   ++ +NR+  IP  
Sbjct: 273 KMDQNQLLHLT-PAIGNCIAMQELILTENLLSDVPTSIGRMKLLANFNVDRNRLTEIPKE 331

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I  C  L    + +N +  LP+E+G L +L  LD+  N+L+   +      L  L LS N
Sbjct: 332 IGQCSKLGVLSLRDNRVLYLPSEIGNLKELHVLDVSGNRLQHLPITMGSCNLKALWLSEN 391

Query: 286 S 286
            
Sbjct: 392 Q 392



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 172/356 (48%), Gaps = 16/356 (4%)

Query: 54  HNNIEKLKED-LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           H N+ ++ ED LR +  L  L +  N++ ELP     L  L+ L +S N I ++P +IG+
Sbjct: 22  HCNLTQIPEDILRYVRTLEELLLDANQIRELPRGFFRLAQLRKLTLSDNEIARLPPDIGN 81

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
             +L + D S N + ++P ++  C NL     S N ++ LP+       ++ L +    L
Sbjct: 82  FMSLQELDISRNDITDIPENIKFCRNLQVADFSCNPLSRLPDGFTQLRNLTHLGLNDVSL 141

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
             L  + I S + L  L   +NLL  +P ++  L +L  LDL  N +  +P +I    SL
Sbjct: 142 ARLPPD-IGSLSNLESLELRENLLKYLPSSLSFLVKLKTLDLGSNVLEDLPETIGSLPSL 200

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
            E ++  N LS LP E+G L +L  +D+  N+L+    E   L  L+ L LS NS+  LP
Sbjct: 201 EELWLDCNELSELPPEIGNLKRLTQIDVSENKLERLPDEMSGLLHLTDLILSQNSIEYLP 260

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             IG +  L  L +  N L  L  ++  G   A+ + +   L EN  S+  T+   +  +
Sbjct: 261 EGIGNLRKLSILKMDQNQLLHLTPAI--GNCIAMQELI---LTENLLSDVPTSIGRMKLL 315

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           A          +++   L+ IP EI +  ++  L L  N +  LP E+ +   L V
Sbjct: 316 AN--------FNVDRNRLTEIPKEIGQCSKLGVLSLRDNRVLYLPSEIGNLKELHV 363



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 115/248 (46%), Gaps = 18/248 (7%)

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           LT +  +++     L EL+   N +  +P     L++L +L L  N I  +P  I    S
Sbjct: 25  LTQIPEDILRYVRTLEELLLDANQIRELPRGFFRLAQLRKLTLSDNEIARLPPDIGNFMS 84

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L E  +  N ++ +P  +     L   D   N L        QLR L+ L L++ SL+ L
Sbjct: 85  LQELDISRNDITDIPENIKFCRNLQVADFSCNPLSRLPDGFTQLRNLTHLGLNDVSLARL 144

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           PP+IG ++ L  L L  N L+ L SSL      + L  L++          S   EDL  
Sbjct: 145 PPDIGSLSNLESLELRENLLKYLPSSL------SFLVKLKTL------DLGSNVLEDLPE 192

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFS 410
               L  + +EL L+   LS +P EI     +T++D+S N ++ LP E+S    L    +
Sbjct: 193 TIGSLP-SLEELWLDCNELSELPPEIGNLKRLTQIDVSENKLERLPDEMSGLLHL----T 247

Query: 411 DLVTNKES 418
           DL+ ++ S
Sbjct: 248 DLILSQNS 255


>gi|50400983|sp|Q80U72.2|SCRIB_MOUSE RecName: Full=Protein scribble homolog; Short=Scribble; AltName:
           Full=Protein LAP4
          Length = 1612

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTEL-------------IASKNLLNGMPETI 203
                                    S   L EL             + S+NLL  +PE I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 323 HLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTH 379



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPH 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|418712104|ref|ZP_13272849.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791371|gb|EKR85047.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455791547|gb|EMF43354.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 377

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 294 EIEQLKNLQTLFLSNNQLTIL 314



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 157/364 (43%), Gaps = 45/364 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 289 KTLPKEI----------------------------EQLKNLQT--------LFLSNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV------KFSDLVTNK-ESCISGC 423
            +P EI +   +  L L  N +  LP E+    +LQ       +FS     K    +  C
Sbjct: 313 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSSQEKEKIRKLLPKC 372

Query: 424 YLYW 427
            +Y+
Sbjct: 373 QIYF 376



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 127/260 (48%), Gaps = 7/260 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 116 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P  
Sbjct: 236 YLSDNQLITLPKE-IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSGLPPEIGKMTTLRKLL 304
           N  S    E      +RKLL
Sbjct: 355 NQFSSQEKE-----KIRKLL 369



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 134/318 (42%), Gaps = 61/318 (19%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S   +  +P EIG    L +     NQL  LP  + +  NL      +N +T+L
Sbjct: 48  VRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+LTVL                        P+ I  L  L  L
Sbjct: 108 PKEIEQLKNLQVLDLGSNQLTVL------------------------PQEIEQLKNLQLL 143

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            LH NR+ ++   I    +L    + NN L+ LP E+ +L  L +L L  NQ   +  E 
Sbjct: 144 YLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 203

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L VL L+NN ++ LP EI K+  L+ L L+ N L TL   +              
Sbjct: 204 GQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI-------------- 249

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                         E L  + T        L L    L+ +P E+ +   +  LDL  N 
Sbjct: 250 --------------EQLKNLQT--------LDLSYNQLTILPKEVGQLENLQTLDLRNNQ 287

Query: 392 IQELPPELSSCASLQVKF 409
           ++ LP E+    +LQ  F
Sbjct: 288 LKTLPKEIEQLKNLQTLF 305



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339


>gi|418688837|ref|ZP_13249972.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361995|gb|EJP17948.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 377

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 294 EIEQLKNLQTLFLSNNQLTIL 314



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 122/243 (50%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTL 313
           +TL
Sbjct: 289 KTL 291



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 121/245 (49%), Gaps = 2/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 116 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P  
Sbjct: 236 YLSDNQLITLPKE-IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSG 289
           N  S 
Sbjct: 355 NQFSS 359



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 15/284 (5%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           ++L  +L   L +     S   + +LP ++     + +L +  N+LTVL    I     L
Sbjct: 36  RDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQE-IEQLKNL 94

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L    N L  +P+ I  L  L  LDL  N++  +P  I    +L   Y+ +N L+ L 
Sbjct: 95  QLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLS 154

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            ++ +L  L +LDL +NQL     E  QL+ L  L LS N  +  P EIG++  L+ L L
Sbjct: 155 KDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFL 214

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N +  L + +        L+YL   L +N+        E L  + T        L L 
Sbjct: 215 NNNQITILPNEIAKLKK---LQYL--YLSDNQLITLPKEIEQLKNLQT--------LDLS 261

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
              L+ +P E+ +   +  LDL  N ++ LP E+    +LQ  F
Sbjct: 262 YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLF 305



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339


>gi|45656722|ref|YP_000808.1| hypothetical protein LIC10831 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084319|ref|ZP_15545182.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102944|ref|ZP_15563546.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599958|gb|AAS69445.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367259|gb|EKP22645.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433219|gb|EKP77567.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 377

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 294 EIEQLKNLQTLFLSNNQLTIL 314



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 149/339 (43%), Gaps = 38/339 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 289 KTLPKEI----------------------------EQLKNLQT--------LFLSNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            +P EI +   +  L L  N +  LP E+    +LQ  +
Sbjct: 313 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLY 351



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 121/245 (49%), Gaps = 2/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 116 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P  
Sbjct: 236 YLSDNQLITLPKE-IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSG 289
           N  S 
Sbjct: 355 NQFSS 359



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 134/318 (42%), Gaps = 61/318 (19%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S   +  +P EIG    L +     NQL  LP  + +  NL      +N +T+L
Sbjct: 48  VRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+LTVL                        P+ I  L  L  L
Sbjct: 108 PKEIEQLKNLQVLDLGSNQLTVL------------------------PQEIEQLKNLQLL 143

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            LH NR+ ++   I    +L    + NN L+ LP E+ +L  L +L L  NQ   +  E 
Sbjct: 144 YLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 203

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L VL L+NN ++ LP EI K+  L+ L L+ N L TL   +              
Sbjct: 204 GQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI-------------- 249

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                         E L  + T        L L    L+ +P E+ +   +  LDL  N 
Sbjct: 250 --------------EQLKNLQT--------LDLSYNQLTILPKEVGQLENLQTLDLRNNQ 287

Query: 392 IQELPPELSSCASLQVKF 409
           ++ LP E+    +LQ  F
Sbjct: 288 LKTLPKEIEQLKNLQTLF 305



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339


>gi|432885659|ref|XP_004074704.1| PREDICTED: protein LAP2-like [Oryzias latipes]
          Length = 1250

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 155/331 (46%), Gaps = 37/331 (11%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+ S+ SL  VP E++ +F++            LQ+L L  N IE+L + L N  LL  
Sbjct: 25  SLDYSHCSLETVPKEIF-SFEKT-----------LQELYLDANQIEELPKQLFNCQLLNR 72

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE---- 128
           L+V  N L+ LPAAI  L  L+ LDVS N I + PD I +   L   + S N++ +    
Sbjct: 73  LSVPDNDLAVLPAAIANLINLRELDVSKNGIQEFPDSIKNCKGLTIVEASVNRMPKLPEG 132

Query: 129 -------------------LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
                              LP+S GR   L   +   N + +LP+ +   +++ +LD+  
Sbjct: 133 FTLLLNLTQLYLNDGYLEFLPASFGRLAKLQILELRENQLQNLPKSMQKLTQLERLDLGS 192

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+ T +   ++   + + EL    N L  +P  +G L  L  LD+ +N +  +   ISGC
Sbjct: 193 NEFTEVP-EVLEHLSGIKELWMDGNKLTVLPAMVGKLKNLEYLDMSKNNLEMVDEQISGC 251

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            +L +  + NNAL+ LPA +G L KL  L +  NQL         L  +  LD S N + 
Sbjct: 252 ENLQDLLLSNNALTQLPASIGSLKKLTALKVDENQLMFLPDSVGGLTAIDELDCSFNEIE 311

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            LP  IG+   +R      N L  L   + N
Sbjct: 312 ALPSSIGQWVAIRTFAADHNFLTELPPEMGN 342



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 24/195 (12%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L ++ NN+E + E +     L  L +S+N L++LPA+IG L  L +L V  N +M 
Sbjct: 230 NLEYLDMSKNNLEMVDEQISGCENLQDLLLSNNALTQLPASIGSLKKLTALKVDENQLMF 289

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PD +G  TA+ + DCS N+++ LPSS+G+ + +  F A +N +T LP ++         
Sbjct: 290 LPDSVGGLTAIDELDCSFNEIEALPSSIGQWVAIRTFAADHNFLTELPPEM--------- 340

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
              GN            W  LT L    N L  +PE +G + +L  ++L  N++ ++P S
Sbjct: 341 ---GN------------WKNLTVLFLHSNKLESLPEEMGDMQKLKVINLSNNKLKNLPYS 385

Query: 226 ISGCCSLAEFYMGNN 240
            +    +   ++  N
Sbjct: 386 FTKLSEMTAMWLSEN 400



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 133/319 (41%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++ SLD S  S+  +P EI S      F+ +                L +     N
Sbjct: 18  GEEEVVTSLDYSHCSLETVPKEIFS------FEKT----------------LQELYLDAN 55

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  +++L V  N L VL    IA+   L EL  SKN +   P++I +  
Sbjct: 56  QIEELPKQLFNCQLLNRLSVPDNDLAVLPA-AIANLINLRELDVSKNGIQEFPDSIKNCK 114

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   NR+  +P   +   +L + Y+ +  L  LPA  G+L+KL  L+L  NQL+ 
Sbjct: 115 GLTIVEASVNRMPKLPEGFTLLLNLTQLYLNDGYLEFLPASFGRLAKLQILELRENQLQ- 173

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                                 LP  + K+T L +L L  N    +         P +L+
Sbjct: 174 ---------------------NLPKSMQKLTQLERLDLGSNEFTEV---------PEVLE 203

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
           +L                              KEL ++G  L+ +P+ + +   +  LD+
Sbjct: 204 HLSG---------------------------IKELWMDGNKLTVLPAMVGKLKNLEYLDM 236

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N+++ +  ++S C +LQ
Sbjct: 237 SKNNLEMVDEQISGCENLQ 255


>gi|440789611|gb|ELR10917.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 911

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 180/385 (46%), Gaps = 48/385 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N++  L  +L  L  LT+L++ +NKL+ELPA I  L  L  L + +N + ++
Sbjct: 501 LKALGLNENSLRTLPNELGQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQL 560

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EIG   +L      +NQL +LP  L    NL     S N +T     +    ++  LD
Sbjct: 561 PEEIGCLVSLEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTKF-RSVEKLCQLKDLD 619

Query: 167 VEGNKLTVLSNNLIASWTMLTELI---ASKNLLNGMPETIGSLSRLIRLDLH-------- 215
           ++ NKLT L       W  LT+L+    S+N L   P TI  L RL  LDL         
Sbjct: 620 LKQNKLTTLQ----GGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEVLAPEIGN 675

Query: 216 ----------QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
                     +N+++++P+ +     L E ++  N L A+P EL  L  L  LDL +N+ 
Sbjct: 676 MTSLRSLYLGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDLSTNEF 735

Query: 266 KEYCVEAC-QLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS--SLVNGPT 322
           + +    C    L+ L++S+N +  L  +IG +TTL++L L  N L  L    SL+ G T
Sbjct: 736 QTFPDARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISLLTGLT 795

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAG 380
              + Y                  +L+T+   +   S  K+L LE   +  +P  I    
Sbjct: 796 ELRVGY-----------------NELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLS 838

Query: 381 EITKLDLSRNSIQELPPELSSCASL 405
            +    ++ N + +LP E+ +  SL
Sbjct: 839 ALELFVVTDNLLNDLPNEMVNMTSL 863



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 184/435 (42%), Gaps = 89/435 (20%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           S +L  + L  VP+ V             WE  +L  L L  N IE L  DL  L  L  
Sbjct: 457 SYDLRRKELTAVPSNV-------------WEMKNLSVLNLYMNKIESLPPDLGKLTKLKA 503

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L ++ N L  LP  +G+L  L  LD+ +N + ++P  I     L K     N+L++LP  
Sbjct: 504 LGLNENSLRTLPNELGQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEE 563

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN--------------- 177
           +G  ++L      NN +  LP  L+  + +  LD+  N LT   +               
Sbjct: 564 IGCLVSLEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTKFRSVEKLCQLKDLDLKQN 623

Query: 178 ---NLIASWTMLTELI---ASKNLLNGMPETIGSLSRLIRLDLH---------------- 215
               L   W  LT+L+    S+N L   P TI  L RL  LDL                 
Sbjct: 624 KLTTLQGGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEVLAPEIGNMTSLRSLY 683

Query: 216 --QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
             +N+++++P+ +     L E ++  N L A+P EL  L  L  LDL +N+ + +    C
Sbjct: 684 LGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDLSTNEFQTFPDARC 743

Query: 274 -QLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
               L+ L++S+N +  L  +IG +TTL++L L  N L                     R
Sbjct: 744 FPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQL--------------------DR 783

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
           LP     E S     L+T  T L V   E       L  +P EI +   I +L L  N +
Sbjct: 784 LP----GEIS-----LLTGLTELRVGYNE-------LLTLPHEIGDISLIKQLHLEHNKM 827

Query: 393 QELPPELSSCASLQV 407
            ELP  + + ++L++
Sbjct: 828 VELPKSIGNLSALEL 842



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 132/272 (48%), Gaps = 7/272 (2%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N +  L+     L  L  L+VS NKL E P  I EL  L++LD+       +
Sbjct: 615 LKDLDLKQNKLTTLQGGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEV-----L 669

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
             EIG+ T+L       N+L  LP+ LG    L +     N + ++P +L+    +  LD
Sbjct: 670 APEIGNMTSLRSLYLGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLD 729

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+     +        L  L  S N +  +   IG+L+ L +L+L +N++  +P  I
Sbjct: 730 LSTNEFQTFPDARCFP-PALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEI 788

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
           S    L E  +G N L  LP E+G +S +  L L  N++ E       L  L +  +++N
Sbjct: 789 SLLTGLTELRVGYNELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSALELFVVTDN 848

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L+ LP E+  MT+L +L + GNP   L +++
Sbjct: 849 LLNDLPNEMVNMTSLSELKVDGNPFDNLPAAV 880



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 23/243 (9%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV------------------SHNKLSE 82
           W    DL +L ++ N +E+    +  LP L  L++                    NKL  
Sbjct: 632 WGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEVLAPEIGNMTSLRSLYLGRNKLIA 691

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL--NLS 140
           LPA +G L  L+ L +  N +  IP E+ +   L   D S+N+ +  P +  RC    L+
Sbjct: 692 LPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDLSTNEFQTFPDA--RCFPPALN 749

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               S+N +  L   +   + + +L+++ N+L  L    I+  T LTEL    N L  +P
Sbjct: 750 SLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGE-ISLLTGLTELRVGYNELLTLP 808

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
             IG +S + +L L  N+++ +P SI    +L  F + +N L+ LP E+  ++ L  L +
Sbjct: 809 HEIGDISLIKQLHLEHNKMVELPKSIGNLSALELFVVTDNLLNDLPNEMVNMTSLSELKV 868

Query: 261 HSN 263
             N
Sbjct: 869 DGN 871



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 13/141 (9%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLN+S+  ++ + N++                  L++L L  N +++L  ++  L  LT 
Sbjct: 750 SLNMSDNQMKRLSNQI-------------GALTTLKQLNLDENQLDRLPGEISLLTGLTE 796

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L V +N+L  LP  IG++ ++K L +  N ++++P  IG+ +AL  F  + N L +LP+ 
Sbjct: 797 LRVGYNELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSALELFVVTDNLLNDLPNE 856

Query: 133 LGRCLNLSDFKASNNCITSLP 153
           +    +LS+ K   N   +LP
Sbjct: 857 MVNMTSLSELKVDGNPFDNLP 877



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 1/159 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+ L L+ N  +   +     P L  LN+S N++  L   IG L  LK L++  N + 
Sbjct: 723 VNLKHLDLSTNEFQTFPDARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLD 782

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P EI   T L +     N+L  LP  +G    +      +N +  LP+ + + S +  
Sbjct: 783 RLPGEISLLTGLTELRVGYNELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSALEL 842

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
             V  N L  L N ++ + T L+EL    N  + +P  +
Sbjct: 843 FVVTDNLLNDLPNEMV-NMTSLSELKVDGNPFDNLPAAV 880


>gi|148679900|gb|EDL11847.1| mCG11661 [Mus musculus]
          Length = 1506

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 153/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 43  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 90

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 91  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 150

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 151 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 210

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 211 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 269

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 270 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 329

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LPP IG + +LR L +  N
Sbjct: 330 LPPTIGYLHSLRTLAVDEN 348



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 177 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 236

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 237 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 296

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 297 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 355

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 356 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 415

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 416 DNQSKALIP 424



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 122/320 (38%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 35  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 94

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 95  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 130

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 131 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 176

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 177 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 212

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 213 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 252

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N I+ +  ++S C +L+
Sbjct: 253 MSKNRIETVDMDISGCEALE 272


>gi|428164826|gb|EKX33838.1| hypothetical protein GUITHDRAFT_81033, partial [Guillardia theta
           CCMP2712]
          Length = 417

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 192/390 (49%), Gaps = 22/390 (5%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
              + +  +L  L L  N I+ +   ++++  L +LN S+NK+  LP  IG+L+ LK+  
Sbjct: 18  ASSFLQLTNLVNLFLNMNMIDCVPASVQHMTWLKLLNFSNNKIGSLPLEIGKLNSLKTFI 77

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           +S+N +  +P  IG  TAL +   S+NQ+  LP  LG   +L++    +N +   P ++ 
Sbjct: 78  MSYNLLTTLPPTIGGMTALTELSVSNNQITRLPPILGVMTSLTEVNIQDNFLDQHPVEVV 137

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
           + + + +L +E N+L+ +    I+  + LT L  S N L  +P +IG+LS L  L L+ N
Sbjct: 138 EHALLLQLKLELNRLSNIPPE-ISRLSTLTFLNFSHNQLRTLPPSIGTLSNLTVLYLNDN 196

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++  +P  +          + NN ++ +P ++G L+ L  L L  N +        +++ 
Sbjct: 197 KLTRLPIELGHLSPTMLSRLDNNDITIIPVQVGNLTSLTELWLEGNNIMFLSSSIGKMQD 256

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY-LRSRLPE 335
           L VL + NN L  LP EIG + TL +L +  N ++ L         PA +K+    R   
Sbjct: 257 LKVLHMHNNGLLYLPAEIGNLQTLIELRIPFNEIKVL---------PADIKHCFNLRKLS 307

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
            + +  ST   D++   T L    + L++    +  +P  +     + KL + +N ++ L
Sbjct: 308 LQHNLLSTVSADVLQSLTNL----ESLNISRNQIVYVPGTVGCLHALQKLRMDQNQVRSL 363

Query: 396 PPELSSCASLQV------KFSDLVTNKESC 419
           P E+  C+SL +      +FS L     SC
Sbjct: 364 PSEIGGCSSLTLLSITCNQFSSLPDELSSC 393



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 122/250 (48%), Gaps = 29/250 (11%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELH--MLKSLDVSFNSIMKIPDE 109
            +HN +  L   +  L  LTVL ++ NKL+ LP  +G L   ML  LD   N I  IP +
Sbjct: 170 FSHNQLRTLPPSIGTLSNLTVLYLNDNKLTRLPIELGHLSPTMLSRLDN--NDITIIPVQ 227

Query: 110 IGSATAL---------VKFDCSS--------------NQLKELPSSLGRCLNLSDFKASN 146
           +G+ T+L         + F  SS              N L  LP+ +G    L + +   
Sbjct: 228 VGNLTSLTELWLEGNNIMFLSSSIGKMQDLKVLHMHNNGLLYLPAEIGNLQTLIELRIPF 287

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N I  LP D+  C  + KL ++ N L+ +S +++ S T L  L  S+N +  +P T+G L
Sbjct: 288 NEIKVLPADIKHCFNLRKLSLQHNLLSTVSADVLQSLTNLESLNISRNQIVYVPGTVGCL 347

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L +L + QN++ S+PS I GC SL    +  N  S+LP EL   S L  L +  N+  
Sbjct: 348 HALQKLRMDQNQVRSLPSEIGGCSSLTLLSITCNQFSSLPDELSSCSLLTALHISGNRFF 407

Query: 267 EY--CVEACQ 274
           +   C+E+ +
Sbjct: 408 QLPRCIESLK 417



 Score = 41.6 bits (96), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 28/119 (23%)

Query: 43  EAVDLQKLILAHNNIEKLKED-LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
              +L+KL L HN +  +  D L++L  L  LN+S N++  +P  +G LH L+ L +  N
Sbjct: 299 HCFNLRKLSLQHNLLSTVSADVLQSLTNLESLNISRNQIVYVPGTVGCLHALQKLRMDQN 358

Query: 102 SIMKIPDEIG-----------------------SATALVKFDCSSNQLKELPSSLGRCL 137
            +  +P EIG                       S + L     S N+  +LP    RC+
Sbjct: 359 QVRSLPSEIGGCSSLTLLSITCNQFSSLPDELSSCSLLTALHISGNRFFQLP----RCI 413


>gi|418728131|ref|ZP_13286711.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777176|gb|EKR57144.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 377

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 294 EIEQLKNLQTLFLSNNQLTIL 314



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 149/339 (43%), Gaps = 38/339 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 289 KTLPKEI----------------------------EQLKNLQT--------LFLSNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            +P EI +   +  L L  N +  LP E+    +LQ  +
Sbjct: 313 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLY 351



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 121/245 (49%), Gaps = 2/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 116 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P  
Sbjct: 236 YLSDNQLITLPKE-IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSG 289
           N  S 
Sbjct: 355 NQFSS 359



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 15/284 (5%)

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
           ++L  +L   L +     S   + +LP ++     + +L +  N+LTVL    I     L
Sbjct: 36  RDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQE-IEQLKNL 94

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L    N L  +P+ I  L  L  LDL  N++  +P  I    +L   Y+ +N L+ L 
Sbjct: 95  QLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLS 154

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
            ++ +L  L +LDL +NQL     E  QL+ L  L LS N  +  P EIG++  L+ L L
Sbjct: 155 KDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFL 214

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE 365
             N +  L + +        L+YL   L +N+        E L  + T        L L 
Sbjct: 215 NNNQITILPNEIAKLKK---LQYL--YLSDNQLITLPKEIEQLKNLQT--------LDLS 261

Query: 366 GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
              L+ +P E+ +   +  LDL  N ++ LP E+    +LQ  F
Sbjct: 262 YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLF 305



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339


>gi|417761949|ref|ZP_12409946.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776878|ref|ZP_12424710.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672964|ref|ZP_13234294.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942211|gb|EKN87831.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573374|gb|EKQ36424.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580071|gb|EKQ47902.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 597

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 168/364 (46%), Gaps = 11/364 (3%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+   +  L +++  L  L  LN+  N L+ LP  IG+L  L+ LD+  N + 
Sbjct: 50  LDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLA 109

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
             P  I     L   D S N+L  LP+ +GR  NL D     N +T+ P+++     + K
Sbjct: 110 TFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 169

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L    I     L  L    N    +P+ IG L  L  L+L  N++ ++P 
Sbjct: 170 LWLSENRLTALPKE-IGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPV 228

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L E Y+ NN L+  P E+G+L  L  L    N+L     +  QL+ L  L+L 
Sbjct: 229 EIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKKMGQLQNLQTLNLV 288

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           NN L+  P EIG++  L+ L L  NPL       +    P       S L   E +E   
Sbjct: 289 NNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPD------SNLDLREVAENGV 342

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLS-AIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
            +   + +A    +   ELSLE  + S + P  I +   +  L+L       LP E+S  
Sbjct: 343 YRN--LNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRL 400

Query: 403 ASLQ 406
            +L+
Sbjct: 401 KNLK 404



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 132/294 (44%), Gaps = 43/294 (14%)

Query: 17  SNRSLRDVP-NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIE----KLKEDLRNLPLLT 71
           SN  LR+V  N VY+N + A E     E + + +L L + +      K+    RNL    
Sbjct: 330 SNLDLREVAENGVYRNLNLAQE-----EPLKVFELSLEYKDFSQSFPKVILKFRNL---R 381

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            LN+     S LP  I  L  LK L +  N +  IP EIG    L   +  +N+L+ LP 
Sbjct: 382 GLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPK 441

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 442 EIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 484

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++P+ I    +L E  + +N  + LP E+GK
Sbjct: 485 -------FPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGK 537

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           L KL TLDL +NQL     E  QL+ L  L L NN  S       +   +RKLL
Sbjct: 538 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS-----FEEQERIRKLL 586



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 164/390 (42%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+S N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 189 NLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTV 248

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 249 FPKEIGQLQNLQMLCSPENRLTALPKKMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 308

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 309 ELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 368

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 369 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 428

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 429 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 488

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    K              +EL L     + +P EI
Sbjct: 489 IGKLENLQTLNLQRNQLT-NLPAEIEQLK------------NLQELDLNDNQFTVLPKEI 535

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 536 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 565



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 186/462 (40%), Gaps = 89/462 (19%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 55  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTVLPKEIGQLENLQEL 101

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 102 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 161

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL---------------SNN 178
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L               S+N
Sbjct: 162 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDN 221

Query: 179 LIASWTM-------LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
            +A+  +       L EL    N L   P+ IG L  L  L   +NR+ ++P  +    +
Sbjct: 222 QLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKKMGQLQN 281

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL-------------------------- 265
           L    + NN L+  P E+G+L  L  L+L  N L                          
Sbjct: 282 LQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENG 341

Query: 266 --------KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                   +E  ++  +L L   D S       P  I K   LR L L      TL   +
Sbjct: 342 VYRNLNLAQEEPLKVFELSLEYKDFS----QSFPKVILKFRNLRGLNLYDCGFSTLPKEI 397

Query: 318 VNGPTPALLKYLRSRLP--ENEDSEASTTK--EDLITMATRLSVTSKE---------LSL 364
                   LKYL   L   +N  SE    K  E L   A  L    KE         LSL
Sbjct: 398 SRLKN---LKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSL 454

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
               L   P+EI +  ++ KLDLS N     P E+    +LQ
Sbjct: 455 HQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 496


>gi|359461194|ref|ZP_09249757.1| Miro domain-containing protein [Acaryochloris sp. CCMEE 5410]
          Length = 448

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 163/349 (46%), Gaps = 41/349 (11%)

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
           T L++    L+ELP  IG+L  ++ + +  NS+  +P EIG    L   + S   L  LP
Sbjct: 86  TTLDLQGLGLAELPPDIGQLRHVQIIYLVGNSLQTLPPEIGQLKQLKTLNLSGGNLNRLP 145

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
             +G+  NL       N + +LP ++    ++ +LD+  N+L+ L               
Sbjct: 146 PEIGQLSNLQSLNLYKNQLRTLPPEIGQLKQLQRLDIRNNRLSAL--------------- 190

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
                    P  IG L  L RL LH N++ ++P  I    +L +  +  N L  LP E+G
Sbjct: 191 ---------PPEIGGLQNLKRLTLHHNQLKTLPPEIGELKNLQKLAVDYNQLHRLPVEIG 241

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           +L  L +L L  N+LK   V   QL  L VL L+ N L+ LPPEI ++  L  L LT N 
Sbjct: 242 QLENLVSLGLPYNKLKHLPVSIGQLNNLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSNK 301

Query: 310 LRTLRSSLVN---------GPTPALLKY-LRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L+   + +++         G +P  L + ++  L E    E +TT   + ++   +   +
Sbjct: 302 LQRFPTEIIHLTNLEVLHLGASPESLAFSVQFHLKE----EYATTFNQVSSLPPEIGQLT 357

Query: 360 --KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             ++L+L    L  +P EI +   +  L LS N +  +P E+   A+LQ
Sbjct: 358 QLQDLNLGSCTLLNLPPEIGQLVNLQMLGLSNNGLMSVPHEIGRLANLQ 406



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 171/385 (44%), Gaps = 64/385 (16%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
            +DLQ L LA     +L  D+  L  + ++ +  N L  LP  IG+L  LK+L++S  ++
Sbjct: 87  TLDLQGLGLA-----ELPPDIGQLRHVQIIYLVGNSLQTLPPEIGQLKQLKTLNLSGGNL 141

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
            ++P EIG  + L   +   NQL+ LP  +G+   L      NN +++LP ++     + 
Sbjct: 142 NRLPPEIGQLSNLQSLNLYKNQLRTLPPEIGQLKQLQRLDIRNNRLSALPPEIGGLQNLK 201

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +L +  N+L  L    I     L +L    N L+ +P  IG L  L+ L L  N++  +P
Sbjct: 202 RLTLHHNQLKTLPPE-IGELKNLQKLAVDYNQLHRLPVEIGQLENLVSLGLPYNKLKHLP 260

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
            SI    +L    +  N L+ LP E+ +L +L  L L SN+L+ +  E   L  L VL L
Sbjct: 261 VSIGQLNNLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSNKLQRFPTEIIHLTNLEVLHL 320

Query: 283 ---------------------SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
                                + N +S LPPEIG++T L+ L L          +L+N P
Sbjct: 321 GASPESLAFSVQFHLKEEYATTFNQVSSLPPEIGQLTQLQDLNLGS-------CTLLNLP 373

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
                       PE             I     L +    L L    L ++P EI     
Sbjct: 374 ------------PE-------------IGQLVNLQM----LGLSNNGLMSVPHEIGRLAN 404

Query: 382 ITKLDLSRNSIQELPPELSSCASLQ 406
           +  L+LS N ++ LPPEL +   L+
Sbjct: 405 LQGLELSYNQLKSLPPELKALTRLE 429



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 143/305 (46%), Gaps = 37/305 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL    LR +P E+              +   LQ+L + +N +  L  ++  L  L  
Sbjct: 156 SLNLYKNQLRTLPPEI-------------GQLKQLQRLDIRNNRLSALPPEIGGLQNLKR 202

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + HN+L  LP  IGEL  L+ L V +N + ++P EIG    LV      N+LK LP S
Sbjct: 203 LTLHHNQLKTLPPEIGELKNLQKLAVDYNQLHRLPVEIGQLENLVSLGLPYNKLKHLPVS 262

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI------------ 180
           +G+  NL     + N +T LP +++   ++  L +  NKL      +I            
Sbjct: 263 IGQLNNLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSNKLQRFPTEIIHLTNLEVLHLGA 322

Query: 181 --------ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
                     + +  E   + N ++ +P  IG L++L  L+L    +L++P  I    +L
Sbjct: 323 SPESLAFSVQFHLKEEYATTFNQVSSLPPEIGQLTQLQDLNLGSCTLLNLPPEIGQLVNL 382

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
               + NN L ++P E+G+L+ L  L+L  NQLK    E   L RL  L+LSNN    LP
Sbjct: 383 QMLGLSNNGLMSVPHEIGRLANLQGLELSYNQLKSLPPELKALTRLEYLNLSNNP---LP 439

Query: 292 PEIGK 296
            E+ K
Sbjct: 440 AEVMK 444



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 36/135 (26%)

Query: 272 ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
           A + + + LDL    L+ LPP+IG++  ++ + L GN L+TL       P    LK L++
Sbjct: 80  AHETKATTLDLQGLGLAELPPDIGQLRHVQIIYLVGNSLQTLP------PEIGQLKQLKT 133

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                         L+L G NL+ +P EI +   +  L+L +N 
Sbjct: 134 ------------------------------LNLSGGNLNRLPPEIGQLSNLQSLNLYKNQ 163

Query: 392 IQELPPELSSCASLQ 406
           ++ LPPE+     LQ
Sbjct: 164 LRTLPPEIGQLKQLQ 178


>gi|156361922|ref|XP_001625532.1| predicted protein [Nematostella vectensis]
 gi|156212370|gb|EDO33432.1| predicted protein [Nematostella vectensis]
          Length = 1030

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 165/333 (49%), Gaps = 50/333 (15%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           ++   ++++L L+ N I +L  ++ NL  L   ++S N + ++P  I     L SLD+S 
Sbjct: 2   FFRLYNIRRLGLSDNEIARLPPEVGNLANLQEFDISRNDICDIPENIKYCKSLVSLDLSG 61

Query: 101 NSIMKIPD-----------------------EIGSATA---------LVKF--------- 119
           N I K+PD                       +IGS T          L+KF         
Sbjct: 62  NPISKLPDGFSQLQHLTTLCLNDVSLIRLPPDIGSLTELTVLEARENLIKFLPVSLAFLS 121

Query: 120 -----DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
                D   N+L+ELP  +G   +L++F    N + +LP ++ +  K+   DV  NK+  
Sbjct: 122 KLERLDLGCNELEELPDVVGSLPSLAEFWLDGNLLKTLPTEIGNLKKLQIFDVSENKIEY 181

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L + +    + LT+L  S+NLL  +P+TIG L +L  L + QNR++++  +I GC +L E
Sbjct: 182 LPDEICFCGS-LTDLHLSQNLLEELPDTIGKLKKLQLLKVDQNRLITLTPAIGGCIALQE 240

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPP 292
             +  N L  LP+ +GKL KL  L++  N+L+   VE  +C  +LSV  L +N L  LP 
Sbjct: 241 LILTENLLDVLPSTMGKLHKLSLLNVDRNRLEVLPVELGSCT-KLSVFSLRDNLLQRLPT 299

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           EIG    L  L ++GN L  L  ++   P  AL
Sbjct: 300 EIGNCRNLHVLDVSGNRLECLPLTIGTLPLKAL 332



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 168/332 (50%), Gaps = 17/332 (5%)

Query: 90  LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI 149
           L+ ++ L +S N I ++P E+G+   L +FD S N + ++P ++  C +L     S N I
Sbjct: 5   LYNIRRLGLSDNEIARLPPEVGNLANLQEFDISRNDICDIPENIKYCKSLVSLDLSGNPI 64

Query: 150 TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           + LP+  +    ++ L +    L  L  + I S T LT L A +NL+  +P ++  LS+L
Sbjct: 65  SKLPDGFSQLQHLTTLCLNDVSLIRLPPD-IGSLTELTVLEARENLIKFLPVSLAFLSKL 123

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
            RLDL  N +  +P  +    SLAEF++  N L  LP E+G L KL   D+  N+++   
Sbjct: 124 ERLDLGCNELEELPDVVGSLPSLAEFWLDGNLLKTLPTEIGNLKKLQIFDVSENKIEYLP 183

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
            E C    L+ L LS N L  LP  IGK+  L+ L +  N L TL  ++  G   AL + 
Sbjct: 184 DEICFCGSLTDLHLSQNLLEELPDTIGKLKKLQLLKVDQNRLITLTPAI--GGCIALQEL 241

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           +   L EN      +T   L     +LS+    L+++   L  +P E+    +++   L 
Sbjct: 242 I---LTENLLDVLPSTMGKL----HKLSL----LNVDRNRLEVLPVELGSCTKLSVFSLR 290

Query: 389 RNSIQELPPELSSCASLQVKFSDLVTNKESCI 420
            N +Q LP E+ +C +L V   D+  N+  C+
Sbjct: 291 DNLLQRLPTEIGNCRNLHV--LDVSGNRLECL 320



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 128/270 (47%), Gaps = 22/270 (8%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + +   L  L L   ++ +L  D+ +L  LTVL    N +  LP ++  L  L+ LD+
Sbjct: 69  DGFSQLQHLTTLCLNDVSLIRLPPDIGSLTELTVLEARENLIKFLPVSLAFLSKLERLDL 128

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N + ++PD +GS  +L +F    N LK LP+ +G    L  F  S N I  LP+++  
Sbjct: 129 GCNELEELPDVVGSLPSLAEFWLDGNLLKTLPTEIGNLKKLQIFDVSENKIEYLPDEICF 188

Query: 159 CSKMSKLDVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLL 196
           C  ++ L +  N L  L + +                      I     L ELI ++NLL
Sbjct: 189 CGSLTDLHLSQNLLEELPDTIGKLKKLQLLKVDQNRLITLTPAIGGCIALQELILTENLL 248

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
           + +P T+G L +L  L++ +NR+  +P  +  C  L+ F + +N L  LP E+G    L 
Sbjct: 249 DVLPSTMGKLHKLSLLNVDRNRLEVLPVELGSCTKLSVFSLRDNLLQRLPTEIGNCRNLH 308

Query: 257 TLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
            LD+  N+L+   +    L L  L LS N 
Sbjct: 309 VLDVSGNRLECLPLTIGTLPLKALWLSENQ 338


>gi|456985860|gb|EMG21570.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 368

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 294 EIEQLKNLQTLFLSNNQLTIL 314



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 122/243 (50%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTL 313
           +TL
Sbjct: 289 KTL 291



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 121/245 (49%), Gaps = 2/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 116 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P  
Sbjct: 236 YLSDNQLITLPKE-IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSG 289
           N  S 
Sbjct: 355 NQFSS 359



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 134/318 (42%), Gaps = 61/318 (19%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S   +  +P EIG    L +     NQL  LP  + +  NL      +N +T+L
Sbjct: 48  VRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+LTVL                        P+ I  L  L  L
Sbjct: 108 PKEIEQLKNLQVLDLGSNQLTVL------------------------PQEIEQLKNLQLL 143

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            LH NR+ ++   I    +L    + NN L+ LP E+ +L  L +L L  NQ   +  E 
Sbjct: 144 YLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 203

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L VL L+NN ++ LP EI K+  L+ L L+ N L TL   +              
Sbjct: 204 GQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI-------------- 249

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                         E L  + T        L L    L+ +P E+ +   +  LDL  N 
Sbjct: 250 --------------EQLKNLQT--------LDLSYNQLTILPKEVGQLENLQTLDLRNNQ 287

Query: 392 IQELPPELSSCASLQVKF 409
           ++ LP E+    +LQ  F
Sbjct: 288 LKTLPKEIEQLKNLQTLF 305



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339


>gi|148697567|gb|EDL29514.1| scribbled homolog (Drosophila), isoform CRA_a [Mus musculus]
          Length = 1637

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTEL-------------IASKNLLNGMPETI 203
                                    S   L EL             + S+NLL  +PE I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 323 HLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTH 379



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPH 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|418670524|ref|ZP_13231895.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|418725048|ref|ZP_13283724.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|418729740|ref|ZP_13288287.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|421121420|ref|ZP_15581717.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|409961430|gb|EKO25175.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|410345854|gb|EKO96924.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410753906|gb|EKR15564.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410775918|gb|EKR55909.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 175/369 (47%), Gaps = 38/369 (10%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           +K  +  +LQKL L  N    L +++  L  L  LN+++NKL+ LP  IG+L  L+ L +
Sbjct: 58  NKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSL 117

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N ++ +P EIG    L K +  +N+L  LP  +G+  NL +    +N + SLP ++  
Sbjct: 118 HSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQ 177

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              +  LD+  N+ T +S  ++   T L  L    N L  +P+ I  L  L  L L  N+
Sbjct: 178 LKSLKNLDLNHNEFTTVSKEVMLLET-LENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQ 236

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           + S+P  I    +L    +G N     P E+ +L  L  L+L+ NQL E+  E  QL+ L
Sbjct: 237 LTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSL 296

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             L L +N ++ LP E+ ++  L++L L+GN +  L   ++       LK L        
Sbjct: 297 KYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ------LKNLEW------ 344

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                                   LSL    L+A+P EI +  ++ +L+L  N +  LP 
Sbjct: 345 ------------------------LSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPK 380

Query: 398 ELSSCASLQ 406
           E+    +LQ
Sbjct: 381 EIEQLKNLQ 389



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 88/206 (42%), Gaps = 37/206 (17%)

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L  L LHS
Sbjct: 60  IGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHS 119

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L        
Sbjct: 120 NELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL-------- 171

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
            P  ++ L+S                            K L L     + +  E+     
Sbjct: 172 -PTEIEQLKSL---------------------------KNLDLNHNEFTTVSKEVMLLET 203

Query: 382 ITKLDLSRNSIQELPPELSSCASLQV 407
           +  LDL  N ++ +P E+    SL+V
Sbjct: 204 LENLDLRSNKLKTIPKEIRQLKSLKV 229



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 65/120 (54%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N + +  +++  L  L  L++ HN+++ LP  + +L  L+ L +S N I  +P EI   
Sbjct: 280 YNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L     S+N+L  LP  +G+   L   +  NN +T+LP+++     + +L+++ N ++
Sbjct: 340 KNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|24216019|ref|NP_713500.1| hypothetical protein LA_3320 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075100|ref|YP_005989419.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197247|gb|AAN50518.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458891|gb|AER03436.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 377

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P+EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L  N L  L
Sbjct: 294 EIEQLKNLQTLFLNNNQLTIL 314



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 150/339 (44%), Gaps = 38/339 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP+
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPN 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 289 KTLPKEI----------------------------EQLKNLQT--------LFLNNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            +P EI +   +  L L  N +  LP E+    +LQ  +
Sbjct: 313 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLY 351



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 147/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L  +
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L L+NN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLNNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 131/284 (46%), Gaps = 36/284 (12%)

Query: 17  SNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKEDLRN 66
           SNR L  +PNE+   KN      G      +        +LQ L L  N +  L +D+  
Sbjct: 101 SNR-LTTLPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQ 159

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L  L  L++S+N+L+ LP  I +L  LKSL +S N     P EIG    L     ++NQ+
Sbjct: 160 LQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQI 219

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
             LP+ + +   L     S+N + +LP+++     +  LD+  N+LT+L           
Sbjct: 220 TILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTIL----------- 268

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                        P+ +G L  L  LDL  N++ ++P  I    +L   ++ NN L+ LP
Sbjct: 269 -------------PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLNNNQLTILP 315

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
            E+GKL  L  L L  NQL     E  QL+ L  L L+NN  S 
Sbjct: 316 QEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 359



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     +NN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLNNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339


>gi|440896879|gb|ELR48687.1| Malignant fibrous histiocytoma-amplified sequence 1, partial [Bos
           grunniens mutus]
          Length = 997

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 146/295 (49%), Gaps = 28/295 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSI 103
           D++ L L +N +E++ + L + L  L VL +  N+ ++LP A+ EL H L  LDVS N +
Sbjct: 16  DIEVLNLGNNGLEEVPDGLGSALGSLRVLILRRNRFAQLPQAVAELGHHLTELDVSHNRL 75

Query: 104 MKIPDE-IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
             +  E +G+   L K + S NQL  LP+ LG  ++L +   S N +  LP+  A  S++
Sbjct: 76  SVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSCAGLSRL 135

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    + ++
Sbjct: 136 RTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 194

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------- 275
           PS      SL    + NN L ALPA+  +L +L  L+L SN L+E+      L       
Sbjct: 195 PSGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELY 254

Query: 276 -----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                            RL  L L NN +  LP  I ++T L +L+L GN +  L
Sbjct: 255 LSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVL 309



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 132/276 (47%), Gaps = 28/276 (10%)

Query: 70  LTVLNVSH------------------------NKLSELPAAIGEL-HMLKSLDVSFNSIM 104
           + VLN+ +                        N+ ++LP A+ EL H L  LDVS N + 
Sbjct: 17  IEVLNLGNNGLEEVPDGLGSALGSLRVLILRRNRFAQLPQAVAELGHHLTELDVSHNRLS 76

Query: 105 KIPDE-IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
            +  E +G+   L K + S NQL  LP+ LG  ++L +   S N +  LP+  A  S++ 
Sbjct: 77  VLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSCAGLSRLR 136

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    + ++P
Sbjct: 137 TLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLP 195

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
           S      SL    + NN L ALPA+  +L +L  L+L SN L+E+      L  L  L L
Sbjct: 196 SGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYL 255

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           S N L+ +P  I  +  L  L L  N +R L  S+V
Sbjct: 256 SRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIV 291



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 130/266 (48%), Gaps = 3/266 (1%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L +L ++HN +  L  E +  L  L  LN+SHN+L  LPA +G L  L+ LDVSFN +  
Sbjct: 65  LTELDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAH 124

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PD     + L   D   NQL   P  L + + L +   S+N +  LPED++    +  L
Sbjct: 125 LPDSCAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKIL 184

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            + G +L  L +        L  L+   N L  +P     L RL  L+L  N +   P++
Sbjct: 185 WLSGAELGTLPSGF-CELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAA 243

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +     L E Y+  N L+++P+ +  L +L TL L +N+++       +L  L  L L  
Sbjct: 244 LLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQG 303

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N ++ LP   G+++ +    +  NPL
Sbjct: 304 NQIAVLPDNFGQLSRVGLWKIKDNPL 329



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 120/264 (45%), Gaps = 4/264 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L ++ N +  L +    L  L  L+V HN+L+  P  + +L  L+ LDVS N + 
Sbjct: 110 VHLEELDVSFNRLAHLPDSCAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLR 169

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P++I +  AL     S  +L  LPS      +L      NN + +LP   +   ++  
Sbjct: 170 GLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKM 229

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N L      L+     L EL  S+N L  +P  I  L RL+ L L  NRI  +P 
Sbjct: 230 LNLSSNLLEEFPAALL-PLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPD 288

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
           SI     L E  +  N ++ LP   G+LS++G   +  N L +   E C   +  +    
Sbjct: 289 SIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAYQ 348

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGN 308
             L+   P +       KLLL G 
Sbjct: 349 KELAHSQPAVQPRL---KLLLMGQ 369



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 136/310 (43%), Gaps = 51/310 (16%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPEDLADCSK-MS 163
           +P  IG    L   +  +N L+E+P  LG  L +L       N    LP+ +A+    ++
Sbjct: 10  LPANIGDIEVL---NLGNNGLEEVPDGLGSALGSLRVLILRRNRFAQLPQAVAELGHHLT 66

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +LDV  N+L+VL    + +   L +L  S N L  +P  +G+L  L  LD+  NR+  +P
Sbjct: 67  ELDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLP 126

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
            S +G                       LS+L TLD+  NQL  +  +  QL  L  LD+
Sbjct: 127 DSCAG-----------------------LSRLRTLDVDHNQLTAFPRQLLQLVALEELDV 163

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           S+N L GLP +I  +  L+ L L+G  L TL S          L  L S + +N    A 
Sbjct: 164 SSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCE------LASLESLMLDNNGLRAL 217

Query: 343 TTKEDLITMATRLSVTS----------------KELSLEGMNLSAIPSEIWEAGEITKLD 386
             +   +     L+++S                +EL L    L+++PS I   G +  L 
Sbjct: 218 PAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLW 277

Query: 387 LSRNSIQELP 396
           L  N I+ LP
Sbjct: 278 LDNNRIRYLP 287



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 17/175 (9%)

Query: 237 MGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 293
           +GNN L  +P  LG  L  L  L L  N+  +      +L   L+ LD+S+N LS L  E
Sbjct: 22  LGNNGLEEVPDGLGSALGSLRVLILRRNRFAQLPQAVAELGHHLTELDVSHNRLSVLGAE 81

Query: 294 -IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            +G +  LRKL L+ N L  L + L        L    +RL    DS A  ++       
Sbjct: 82  AVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSCAGLSR------- 134

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
                  + L ++   L+A P ++ +   + +LD+S N ++ LP ++S+  +L++
Sbjct: 135 ------LRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKI 183


>gi|417780635|ref|ZP_12428396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410779344|gb|EKR63961.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 542

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 128/252 (50%), Gaps = 2/252 (0%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L + L+N   + VLN+S  +L+ LP  IG+L  L+ L + +N ++ IP EIG    L   
Sbjct: 34  LTKALQNPSKVRVLNLSGQELATLPKEIGQLQNLQELYLQWNQLIAIPKEIGQLQNLQTL 93

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D   NQL   P  +     L     S N +  LP ++     +  L +  NKLT L    
Sbjct: 94  DLRDNQLVTFPKEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTLPKE- 152

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L EL +  N L  +P+ IG L  L  L+L  NR+ ++P  I    +L    + +
Sbjct: 153 IGQLQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRD 212

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G+L  L TL+L +N+L  +  E  QL+ L  L+L NN L+  P EIG++ 
Sbjct: 213 NQLIILPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQ 272

Query: 299 TLRKLLLTGNPL 310
            LR L L  NPL
Sbjct: 273 NLRDLELLINPL 284



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 164/370 (44%), Gaps = 82/370 (22%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L    N +  L +++  L  L  LN+++N+L+ LP  IG+L  L++LD+  N ++ 
Sbjct: 158 NLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLII 217

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   +  +N+L   P  +G+  NL      NN +T+ P+++     +  L
Sbjct: 218 LPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLRDL 277

Query: 166 DVEGNKLTV------------------------LSNNL----------------IASWTM 185
           ++  N L++                        + +NL                  S++ 
Sbjct: 278 ELLINPLSLKERKRIQKLFPNSNLDLREVAKDGVYHNLNLAQEEPLQVLELSIAYKSFSQ 337

Query: 186 L--TELIASKNL---------LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L   E++  +NL            +P+ IG L  L  L L  N + ++PS+I    +L  
Sbjct: 338 LFPKEILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQLRNLRG 397

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------------------- 275
             +  N L +LP E+ +L  L TL LH N+LK +  E  QL                   
Sbjct: 398 LNLEANLLESLPKEIARLRNLHTLRLHQNKLKTFPKEILQLGKLQKLDLSANELKILPEK 457

Query: 276 -----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
                 L  LDLS+N L+ LP EI K+  L++L L GN L TL S +        LK L+
Sbjct: 458 LERLQNLQELDLSHNQLTILPKEIAKLQNLQELHLNGNQLTTLPSEI------GFLKKLK 511

Query: 331 S-RLPENEDS 339
             RL +NE S
Sbjct: 512 ILRLYQNEFS 521



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 121/264 (45%), Gaps = 38/264 (14%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV----------DLQKLILAHNNIEKLK 61
           LNLS + L  +P E+   +N  E     +W + +          +LQ L L  N +    
Sbjct: 47  LNLSGQELATLPKEIGQLQNLQELY--LQWNQLIAIPKEIGQLQNLQTLDLRDNQLVTFP 104

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           +++  L  L +L++S N+L  LPA IG L  L+SL +  N +  +P EIG    L +   
Sbjct: 105 KEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTLPKEIGQLQNLQELWS 164

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
             N+L  LP  +G+  NL     +NN +T+LP+++     +  LD+  N+L +L      
Sbjct: 165 PGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLIIL------ 218

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
                             P+ IG L  L  L+L  NR+ + P  I    +L    + NN 
Sbjct: 219 ------------------PKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNR 260

Query: 242 LSALPAELGKLSKLGTLDLHSNQL 265
           L+  P E+G+L  L  L+L  N L
Sbjct: 261 LTTFPKEIGQLQNLRDLELLINPL 284


>gi|417782158|ref|ZP_12429891.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777751|gb|EKR62396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 447

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 174/361 (48%), Gaps = 15/361 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L +N +  L E++  L  L +L++  N+L+ LP  IG+L  L+ L ++ N +  
Sbjct: 75  NLQELNLNYNKLTTLPEEIGQLQNLQILHLCENQLTTLPKEIGQLQRLQILHLAHNKLTT 134

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EIG    L + + +  QL  LP  +G+   L       N  T+LP+++     +  L
Sbjct: 135 LPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQVLSLDLNERTTLPKEIGQLQNLQIL 194

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+LT L   +I     L EL  + N L  +P+ IG L  L  L+L  N+++ IP  
Sbjct: 195 YLRANQLTNLPKEII-HLQKLQELNLNHNQLITLPKEIGKLRNLKILNLEDNQLMIIPKE 253

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L +  +G N L+ L   +G L  L  L L  NQL     E  +L+ L +L+L N
Sbjct: 254 IEQLENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLTTLPKEIGKLQNLKILNLCN 313

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ L   IG++  L+KL L  N L TL   +       +L    ++L         TT
Sbjct: 314 NELTTLSNGIGRLQNLQKLDLRFNQLTTLPKEIGKLQNLKVLDLYNNQL---------TT 364

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCAS 404
               I     L V    L L+   L+ +P EI +   + +L+L+ N +  LP ++     
Sbjct: 365 LPKKIGKLQNLKV----LDLDYNQLTTLPKEIGQLQNLRQLNLNHNQLTILPKDIEQLKK 420

Query: 405 L 405
           L
Sbjct: 421 L 421



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 133/266 (50%), Gaps = 25/266 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++ +L  L  LN++HN+L  LP  IG+L  LK L++  N +M 
Sbjct: 190 NLQILYLRANQLTNLPKEIIHLQKLQELNLNHNQLITLPKEIGKLRNLKILNLEDNQLMI 249

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP EI     L K +   NQL  L   +G   NL +     N +T+LP+++     +  L
Sbjct: 250 IPKEIEQLENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLTTLPKEIGKLQNLKIL 309

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N+LT LSN                         IG L  L +LDL  N++ ++P  
Sbjct: 310 NLCNNELTTLSNG------------------------IGRLQNLQKLDLRFNQLTTLPKE 345

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L    + NN L+ LP ++GKL  L  LDL  NQL     E  QL+ L  L+L++
Sbjct: 346 IGKLQNLKVLDLYNNQLTTLPKKIGKLQNLKVLDLDYNQLTTLPKEIGQLQNLRQLNLNH 405

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP +I ++  L  L L  NP+
Sbjct: 406 NQLTILPKDIEQLKKLNTLSLRNNPI 431



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 159/346 (45%), Gaps = 24/346 (6%)

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           DLRN         + N+L+ LP  IG+L  L+ L++++N +  +P+EIG    L      
Sbjct: 55  DLRN---------NDNELTVLPKEIGKLQNLQELNLNYNKLTTLPEEIGQLQNLQILHLC 105

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS 182
            NQL  LP  +G+   L     ++N +T+LPE++     + +L++ G +L+ L    I  
Sbjct: 106 ENQLTTLPKEIGQLQRLQILHLAHNKLTTLPEEIGQLQNLQELNLNGWQLSTLPKE-IGK 164

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
              L  L    N    +P+ IG L  L  L L  N++ ++P  I     L E  + +N L
Sbjct: 165 LQKLQVLSLDLNERTTLPKEIGQLQNLQILYLRANQLTNLPKEIIHLQKLQELNLNHNQL 224

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLR 301
             LP E+GKL  L  L+L  NQL     E  QL  L  L+L  N L+ L   IG +  L+
Sbjct: 225 ITLPKEIGKLRNLKILNLEDNQLMIIPKEIEQLENLQKLNLGRNQLTTLTKGIGDLQNLK 284

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L L  N L TL   +       +L    + L         TT  + I     L    ++
Sbjct: 285 ELHLEINQLTTLPKEIGKLQNLKILNLCNNEL---------TTLSNGIGRLQNL----QK 331

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           L L    L+ +P EI +   +  LDL  N +  LP ++    +L+V
Sbjct: 332 LDLRFNQLTTLPKEIGKLQNLKVLDLYNNQLTTLPKKIGKLQNLKV 377



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 123/278 (44%), Gaps = 41/278 (14%)

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
           D + ++N +T LP+++     + +L++  NKLT L    I     L  L   +N L  +P
Sbjct: 55  DLRNNDNELTVLPKEIGKLQNLQELNLNYNKLTTLPEE-IGQLQNLQILHLCENQLTTLP 113

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           + IG L RL  L L  N++ ++P  I    +L E  +    LS LP E+GKL KL  L L
Sbjct: 114 KEIGQLQRLQILHLAHNKLTTLPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQVLSL 173

Query: 261 HSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             N+      E  QL+ L +L L  N L+ LP EI  +  L++L L  N L TL      
Sbjct: 174 DLNERTTLPKEIGQLQNLQILYLRANQLTNLPKEIIHLQKLQELNLNHNQLITL------ 227

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
              P  +  LR+                            K L+LE   L  IP EI + 
Sbjct: 228 ---PKEIGKLRN---------------------------LKILNLEDNQLMIIPKEIEQL 257

Query: 380 GEITKLDLSRNSIQELPP---ELSSCASLQVKFSDLVT 414
             + KL+L RN +  L     +L +   L ++ + L T
Sbjct: 258 ENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLTT 295



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 10/177 (5%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV-----DLQKLILAH---NNIE 58
           R    LNL +  L  +P E+ +  N  +   G      +     DLQ L   H   N + 
Sbjct: 235 RNLKILNLEDNQLMIIPKEIEQLENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLT 294

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
            L +++  L  L +LN+ +N+L+ L   IG L  L+ LD+ FN +  +P EIG    L  
Sbjct: 295 TLPKEIGKLQNLKILNLCNNELTTLSNGIGRLQNLQKLDLRFNQLTTLPKEIGKLQNLKV 354

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
            D  +NQL  LP  +G+  NL       N +T+LP+++     + +L++  N+LT+L
Sbjct: 355 LDLYNNQLTTLPKKIGKLQNLKVLDLDYNQLTTLPKEIGQLQNLRQLNLNHNQLTIL 411



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 59/106 (55%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L  N +  L +++  L  L VL++ +N+L+ LP  IG+L  LK LD+ +N +  
Sbjct: 328 NLQKLDLRFNQLTTLPKEIGKLQNLKVLDLYNNQLTTLPKKIGKLQNLKVLDLDYNQLTT 387

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +P EIG    L + + + NQL  LP  + +   L+     NN I S
Sbjct: 388 LPKEIGQLQNLRQLNLNHNQLTILPKDIEQLKKLNTLSLRNNPIAS 433


>gi|418701530|ref|ZP_13262455.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759612|gb|EKR25824.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 423

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 175/369 (47%), Gaps = 38/369 (10%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           +K  +  +LQKL L  N    L +++  L  L  LN+++NKL+ LP  IG+L  L+ L +
Sbjct: 58  NKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSL 117

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N ++ +P EIG    L K +  +N+L  LP  +G+  NL +    +N + SLP ++  
Sbjct: 118 HSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQ 177

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
              +  LD+  N+ T +S  ++   T L  L    N L  +P+ I  L  L  L L  N+
Sbjct: 178 LKSLKNLDLNNNEFTTVSKEVMLLET-LENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQ 236

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           + S+P  I    +L    +G N     P E+ +L  L  L+L+ NQL E+  E  QL+ L
Sbjct: 237 LTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSL 296

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             L L +N ++ LP E+ ++  L++L L+GN +  L   ++       LK L        
Sbjct: 297 KYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ------LKNLEW------ 344

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                                   LSL    L+A+P EI +  ++ +L+L  N +  LP 
Sbjct: 345 ------------------------LSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPK 380

Query: 398 ELSSCASLQ 406
           E+    +LQ
Sbjct: 381 EIEQLKNLQ 389



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 88/206 (42%), Gaps = 37/206 (17%)

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L +LDL  N    +   I     L +  + NN L+ LP E+G+L  L  L LHS
Sbjct: 60  IGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHS 119

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N+L     E  Q + L  L+L NN L+ LP EIG++  L++L L  N L +L        
Sbjct: 120 NELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISL-------- 171

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
            P  ++ L+S                            K L L     + +  E+     
Sbjct: 172 -PTEIEQLKSL---------------------------KNLDLNNNEFTTVSKEVMLLET 203

Query: 382 ITKLDLSRNSIQELPPELSSCASLQV 407
           +  LDL  N ++ +P E+    SL+V
Sbjct: 204 LENLDLRSNKLKTIPKEIRQLKSLKV 229



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 65/120 (54%)

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N + +  +++  L  L  L++ HN+++ LP  + +L  L+ L +S N I  +P EI   
Sbjct: 280 YNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L     S+N+L  LP  +G+   L   +  NN +T+LP+++     + +L+++ N ++
Sbjct: 340 KNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|418668203|ref|ZP_13229606.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756060|gb|EKR17687.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 130/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P+EI   
Sbjct: 56  RQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQL 115

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 116 KNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 175

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 176 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 234

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 235 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 294

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 295 EIEQLKNLQTLFLSNNQLTIL 315



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 150/339 (44%), Gaps = 38/339 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP+
Sbjct: 51  VLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPN 110

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 111 EIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 169

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 170 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 229

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 230 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 289

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 290 KTLPKEI----------------------------EQLKNLQT--------LFLSNNQLT 313

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            +P EI +   +  L L  N +  LP E+    +LQ  +
Sbjct: 314 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLY 352



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 147/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L  +
Sbjct: 52  LDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 111

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 112 IEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 171

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 172 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 223

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 224 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 267

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  
Sbjct: 268 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 327

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 328 LSLVYNQLTTL 338



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 131/284 (46%), Gaps = 36/284 (12%)

Query: 17  SNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKEDLRN 66
           SNR L  +PNE+   KN      G      +        +LQ L L  N +  L +D+  
Sbjct: 102 SNR-LTTLPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQ 160

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L  L  L++S+N+L+ LP  I +L  LKSL +S N     P EIG    L     ++NQ+
Sbjct: 161 LQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQI 220

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
             LP+ + +   L     S+N + +LP+++     +  LD+  N+LT+L           
Sbjct: 221 TILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTIL----------- 269

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                        P+ +G L  L  LDL  N++ ++P  I    +L   ++ NN L+ LP
Sbjct: 270 -------------PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 316

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
            E+GKL  L  L L  NQL     E  QL+ L  L L+NN  S 
Sbjct: 317 QEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSS 360



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 166 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 225

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 226 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 285

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 286 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 340


>gi|320103236|ref|YP_004178827.1| adenylate cyclase [Isosphaera pallida ATCC 43644]
 gi|319750518|gb|ADV62278.1| Adenylate cyclase [Isosphaera pallida ATCC 43644]
          Length = 278

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 135/257 (52%), Gaps = 25/257 (9%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L  N + ++  ++     LT L +  N+L+ELP+ + +L                     
Sbjct: 23  LGRNRLSRIPAEIGRCVKLTRLILRGNRLAELPSELAKL--------------------- 61

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
             T L + D SSNQL +LP+ + R   L+     +N +T LP +    +K+ +L+++GN+
Sbjct: 62  --TKLSELDLSSNQLTQLPAVVTRLHGLTVLDLHSNRLTQLPAEFGQLTKLIRLNLQGNQ 119

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L  L    I   T L EL    N L  +P  IG L+ +++L L QNR+ S+P  I    +
Sbjct: 120 LRRLPAE-IGKLTKLMELNLHHNKLEALPPEIGKLTAVVKLYLRQNRLRSLPPEIGKMVA 178

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L    + NN L++LP E+GKL +L  L+L +N+L     E  QL RL  LDLS+N L  L
Sbjct: 179 LCWLNLYNNELTSLPPEIGKLRQLVKLNLAANRLTTLPPEIGQLTRLGTLDLSHNPLEHL 238

Query: 291 PPEIGKMTTLRKLLLTG 307
           PP++ +++ LR++L  G
Sbjct: 239 PPQLSQLSGLRQILADG 255



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 128/294 (43%), Gaps = 61/294 (20%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D   N+L  +P+ +GRC+ L+      N +  LP +LA  +K+S+LD+           
Sbjct: 21  LDLGRNRLSRIPAEIGRCVKLTRLILRGNRLAELPSELAKLTKLSELDL----------- 69

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                        S N L  +P  +  L  L  LDLH NR+  +P+       L    + 
Sbjct: 70  -------------SSNQLTQLPAVVTRLHGLTVLDLHSNRLTQLPAEFGQLTKLIRLNLQ 116

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKM 297
            N L  LPAE+GKL+KL  L+LH N+L+    E  +L   V L L  N L  LPPEIGKM
Sbjct: 117 GNQLRRLPAEIGKLTKLMELNLHHNKLEALPPEIGKLTAVVKLYLRQNRLRSLPPEIGKM 176

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSV 357
             L  L L  N L +L         P  +  LR  +                        
Sbjct: 177 VALCWLNLYNNELTSL---------PPEIGKLRQLV------------------------ 203

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
              +L+L    L+ +P EI +   +  LDLS N ++ LPP+LS  + L+   +D
Sbjct: 204 ---KLNLAANRLTTLPPEIGQLTRLGTLDLSHNPLEHLPPQLSQLSGLRQILAD 254



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 13/166 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    LR +P E+ K                L +L L HN +E L  ++  L  +  L
Sbjct: 113 LNLQGNQLRRLPAEIGK-------------LTKLMELNLHHNKLEALPPEIGKLTAVVKL 159

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+L  LP  IG++  L  L++  N +  +P EIG    LVK + ++N+L  LP  +
Sbjct: 160 YLRQNRLRSLPPEIGKMVALCWLNLYNNELTSLPPEIGKLRQLVKLNLAANRLTTLPPEI 219

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           G+   L     S+N +  LP  L+  S + ++  +G    +L  +L
Sbjct: 220 GQLTRLGTLDLSHNPLEHLPPQLSQLSGLRQILADGLDPAILPGSL 265


>gi|354491100|ref|XP_003507694.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog, partial
           [Cricetulus griseus]
          Length = 1656

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 20  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 79

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 80  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 139

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 140 LPGDVGNLANLITLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 199

Query: 182 -------------------------SWTMLTEL-------------IASKNLLNGMPETI 203
                                    S   L EL             + S+NLL  +PE I
Sbjct: 200 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGI 259

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 260 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRN 319

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 320 HLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTH 376



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 43  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 102

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 103 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLITLELRENL 159

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 160 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 219

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 220 VCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL-------------- 265

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 266 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPR 303

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 304 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 336



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 171 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 230

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 231 ELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 289

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 290 -----------------------ELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPP 326

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 327 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 386

Query: 285 N 285
           N
Sbjct: 387 N 387


>gi|149066147|gb|EDM16020.1| similar to PDZ-domain protein scribble (predicted), isoform CRA_d
           [Rattus norvegicus]
          Length = 1635

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTEL-------------IASKNLLNGMPETI 203
                                    S   L EL             + S+NLL  +PE I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 323 HLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTH 379



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|28972728|dbj|BAC65780.1| mKIAA1365 protein [Mus musculus]
          Length = 1497

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 153/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 34  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 81

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 82  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 141

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 142 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 201

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 202 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 260

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 261 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 320

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LPP IG + +LR L +  N
Sbjct: 321 LPPTIGYLHSLRTLAVDEN 339



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 168 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 227

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 228 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 287

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 288 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 346

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 347 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 406

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 407 DNQSKALIP 415



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 122/320 (38%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 26  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 85

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 86  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 121

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 122 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 167

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 168 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 204 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 243

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N I+ +  ++S C +L+
Sbjct: 244 MSKNRIETVDMDISGCEALE 263


>gi|223459922|gb|AAI38451.1| Lrrc7 protein [Mus musculus]
          Length = 1398

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 153/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 32  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 80  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 139

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 140 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 199

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 200 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 258

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 259 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 318

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LPP IG + +LR L +  N
Sbjct: 319 LPPTIGYLHSLRTLAVDEN 337



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 166 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 225

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 226 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 285

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 286 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 344

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 345 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 404

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 405 DNQSKALIP 413



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 123/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 24  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 61

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L  + IAS   L EL  SKN +   PE I    
Sbjct: 62  QIEELPKQLFNCQALRKLSIPDNDLSSLPTS-IASLVNLKELDISKNGVQEFPENIKCCK 120

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L               
Sbjct: 121 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL--------------- 165

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                  ++L +L+L  N L  LP  + K+  L +L L  N                   
Sbjct: 166 -------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF----------------- 201

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              S LPE            ++     L    +EL ++   L  +P  I +   +  LD+
Sbjct: 202 ---SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLDM 242

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  ++S C +L+
Sbjct: 243 SKNRIETVDMDISGCEALE 261


>gi|326668654|ref|XP_001920812.3| PREDICTED: leucine-rich repeat-containing protein 7-like [Danio
           rerio]
          Length = 1473

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 155/330 (46%), Gaps = 37/330 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP E++ +F+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEIF-SFERT-----------LEELYLDANQIEELPKQLFNCQALKKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N I + PD I     L   + S N + +LP   
Sbjct: 75  SMPDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKCLSVVEASVNPIAKLPEGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         ++  +N              N + ++P+ +   S++ +LD+  N
Sbjct: 135 TQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLSQLERLDLGSN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L +L  LDL +NRI S+ + ISGC 
Sbjct: 195 EFSELP-EVLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIESLDADISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           SL +  +  N L  LP  +GKL KL TL +  NQL         L  L   D S N L  
Sbjct: 254 SLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           LPP IG + +LR      N L  L   + N
Sbjct: 314 LPPTIGYLHSLRTFAADENFLSDLPREIGN 343



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 128/247 (51%), Gaps = 2/247 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N+++ + + +  L  L  L++  N+ SELP  + ++H LK L +  NS+  I
Sbjct: 163 LRILELRENHLKTMPKSIHRLSQLERLDLGSNEFSELPEVLEQIHSLKELWLDNNSLQTI 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG    L   D + N+++ L + +  C +L D   S N +  LP+ +    K++ L 
Sbjct: 223 PGSIGKLRQLRYLDLAKNRIESLDADISGCESLEDLLLSANMLQQLPDSIGKLKKLTTLK 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+LT L N  I S ++L E   S N L  +P TIG L  L      +N +  +P  I
Sbjct: 283 VDDNQLTSLPNT-IGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLSDLPREI 341

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
             C ++    + +N L  LP E+G+++KL  L+L  N+LK       +L+ L+ L LS+N
Sbjct: 342 GNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDN 401

Query: 286 SLSGLPP 292
               L P
Sbjct: 402 QSKALIP 408



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 37/242 (15%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           +L+   +   L L N SL+ +P  + K                L+ L LA N IE L  D
Sbjct: 202 VLEQIHSLKELWLDNNSLQTIPGSIGK-------------LRQLRYLDLAKNRIESLDAD 248

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +     L  L +S N L +LP +IG+L  L +L V  N +  +P+ IGS + L +FDCS 
Sbjct: 249 ISGCESLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSC 308

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L+ LP ++G   +L  F A  N ++ LP ++ +C  ++ + +  NKL  L        
Sbjct: 309 NELESLPPTIGYLHSLRTFAADENFLSDLPREIGNCRNVTVMSLRSNKLEFL-------- 360

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P+ IG +++L  L+L  NR+ ++P + +    LA  ++ +N   
Sbjct: 361 ----------------PDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQSK 404

Query: 244 AL 245
           AL
Sbjct: 405 AL 406



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 126/319 (39%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P EI S      F+ +                L +     N
Sbjct: 19  GEEEVISVLDYSHCSLQQVPKEIFS------FERT----------------LEELYLDAN 56

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   P+ I    
Sbjct: 57  QIEELPKQLFNCQALKKLSMPDNDLSNLPTT-IASLVNLKELDISKNGIQEFPDNIKCCK 115

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + ++ +  L  LPA  G+LSKL            
Sbjct: 116 CLSVVEASVNPIAKLPEGFTQLLNLTQLFLNDAFLEYLPANFGRLSKL------------ 163

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                      +L+L  N L  +P  I +++ L +L L  N    L         P +L+
Sbjct: 164 ----------RILELRENHLKTMPKSIHRLSQLERLDLGSNEFSEL---------PEVLE 204

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            + S                            KEL L+  +L  IP  I +  ++  LDL
Sbjct: 205 QIHSL---------------------------KELWLDNNSLQTIPGSIGKLRQLRYLDL 237

Query: 388 SRNSIQELPPELSSCASLQ 406
           ++N I+ L  ++S C SL+
Sbjct: 238 AKNRIESLDADISGCESLE 256



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 104/256 (40%), Gaps = 65/256 (25%)

Query: 196 LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P+ I S  R L  L L  N+I  +P  +  C +L +  M +N LS LP  +  L  
Sbjct: 34  LQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVN 93

Query: 255 LGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           L  LD+  N ++E+   ++ C+  LSV++ S N ++ LP    ++  L +L L       
Sbjct: 94  LKELDISKNGIQEFPDNIKCCKC-LSVVEASVNPIAKLPEGFTQLLNLTQLFLND----- 147

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                      A L+YL    P N                ++L +    L L   +L  +
Sbjct: 148 -----------AFLEYL----PAN------------FGRLSKLRI----LELRENHLKTM 176

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASL---------------------QVKFSD 411
           P  I    ++ +LDL  N   ELP  L    SL                     Q+++ D
Sbjct: 177 PKSIHRLSQLERLDLGSNEFSELPEVLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRYLD 236

Query: 412 LVTNK----ESCISGC 423
           L  N+    ++ ISGC
Sbjct: 237 LAKNRIESLDADISGC 252


>gi|312378308|gb|EFR24924.1| hypothetical protein AND_10185 [Anopheles darlingi]
          Length = 657

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 191/410 (46%), Gaps = 43/410 (10%)

Query: 20  SLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL----KEDLRNLPLLTVLNV 75
           SL +VP E+++  +             L++L+L  N+I  L     E L  L        
Sbjct: 24  SLPNVPEEIFRYSN------------SLEELLLDANHIRDLPKSRSEFLPGLLQFGFAAT 71

Query: 76  SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG- 134
             ++ +   A    L+ L+ L +S N I+KIP +I +   LV+ D S N++ ++P  +  
Sbjct: 72  GGSRRTSRCAGFFRLYRLRKLGLSDNDILKIPSDIQNFVNLVELDVSRNEIGDIPEDIRH 131

Query: 135 -RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            R L ++DF  S+N I  LP   +    ++ L +    LT L  +     + L  L   +
Sbjct: 132 LRSLQIADF--SSNPIPRLPAGFSQLRNLTVLGLNDMSLTSLPQDF-GCLSKLVSLELRE 188

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NLL  +PE+I  L++L RLDL  N I  +PS +    +L E ++ +N L  LP E+G L 
Sbjct: 189 NLLKNLPESISQLTKLERLDLGDNEIDELPSHLGYLPALQELWLDHNQLQRLPPEIGLLK 248

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  LD+  N+L+E   E   L  L+ L LS N L  LP  + ++T L  L L  N L T
Sbjct: 249 KLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPGGVARLTNLSILKLDQNRLHT 308

Query: 313 LRSSL---VNGPTPALLKYLRSRLPE-----------NEDSEASTTKEDLITMATRLSVT 358
           L  ++   VN     L +   + LP            N D  A       +    +L V 
Sbjct: 309 LHDTIGCCVNMQELILTENFLAELPASIGNMVLLNNLNVDRNALVAVPSALGHCRKLGV- 367

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVK 408
              LSL    L+ +PSE+    E+  LD+S N +Q LP  L    +LQ+K
Sbjct: 368 ---LSLRENKLTRLPSELGHCSELHVLDVSGNLLQHLPYAL---VNLQLK 411



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 137/255 (53%), Gaps = 4/255 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N ++ L E +  L  L  L++  N++ ELP+ +G L  L+ L +  N + ++
Sbjct: 181 LVSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHLGYLPALQELWLDHNQLQRL 240

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    LV  D S N+L+ELP  +G    L+D   S N + +LP  +A  + +S L 
Sbjct: 241 PPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLLETLPGGVARLTNLSILK 300

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L ++ I     + ELI ++N L  +P +IG++  L  L++ +N ++++PS++
Sbjct: 301 LDQNRLHTL-HDTIGCCVNMQELILTENFLAELPASIGNMVLLNNLNVDRNALVAVPSAL 359

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
             C  L    +  N L+ LP+ELG  S+L  LD+  N L+        L+L  + LS N 
Sbjct: 360 GHCRKLGVLSLRENKLTRLPSELGHCSELHVLDVSGNLLQHLPYALVNLQLKAVWLSENQ 419

Query: 287 LSGLP---PEIGKMT 298
              +P   P++ + T
Sbjct: 420 SQPVPTFQPDVDEST 434



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 157/331 (47%), Gaps = 40/331 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L LS+  +  +P+++ +NF            V+L +L ++ N I  + ED+R+L  L + 
Sbjct: 92  LGLSDNDILKIPSDI-QNF------------VNLVELDVSRNEIGDIPEDIRHLRSLQIA 138

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           + S N +  LPA   +L  L  L ++  S+  +P + G  + LV  +   N LK LP S+
Sbjct: 139 DFSSNPIPRLPAGFSQLRNLTVLGLNDMSLTSLPQDFGCLSKLVSLELRENLLKNLPESI 198

Query: 134 GRCLNLSDFKASNNCITSLPEDLA----------DCSKMSK-------------LDVEGN 170
            +   L      +N I  LP  L           D +++ +             LDV  N
Sbjct: 199 SQLTKLERLDLGDNEIDELPSHLGYLPALQELWLDHNQLQRLPPEIGLLKKLVCLDVSEN 258

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +L  L    I     LT+L  S+NLL  +P  +  L+ L  L L QNR+ ++  +I  C 
Sbjct: 259 RLEELPEE-IGGLECLTDLHLSQNLLETLPGGVARLTNLSILKLDQNRLHTLHDTIGCCV 317

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLS 288
           ++ E  +  N L+ LPA +G +  L  L++  N L      +  C+ +L VL L  N L+
Sbjct: 318 NMQELILTENFLAELPASIGNMVLLNNLNVDRNALVAVPSALGHCR-KLGVLSLRENKLT 376

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            LP E+G  + L  L ++GN L+ L  +LVN
Sbjct: 377 RLPSELGHCSELHVLDVSGNLLQHLPYALVN 407


>gi|312080118|ref|XP_003142464.1| PDZ-domain-containing protein scribble [Loa loa]
          Length = 1215

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 154/328 (46%), Gaps = 43/328 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    + D+P E+ KN             + L+ L L+ N I +L   +  L  +T L
Sbjct: 88  LNLKGNDVSDLPEEI-KN------------CIQLKILDLSSNPITRLPPTISQLTSMTSL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++   L+++P  IG+L  L+SL+V  N +  +P  I     L + D   N+L +LP+ +
Sbjct: 135 GLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPNEI 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL +     N + +LPE +  C  + +LDV  NKL +L +  I     L +L  S+
Sbjct: 195 SMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMLLPDE-IGDLEKLDDLTVSQ 253

Query: 194 NLLNGMPETIGS--------------------------LSRLIRLDLHQNRILSIPSSIS 227
           N L  +P +IG+                          L +L  L   +N I  +  +I 
Sbjct: 254 NCLQVLPSSIGNNHLRSLSLLEALFLGITMLYFPITGRLKKLSMLKADRNAITQLTPAIG 313

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNN 285
            C +L E Y+  N L+ +P+ LG L  L TL+L  NQLKE    +  C   LSVL L +N
Sbjct: 314 SCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCT-SLSVLSLRDN 372

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            +  LP EIG++  LR L +  N L  L
Sbjct: 373 LIEQLPLEIGRLENLRVLDVCNNRLNYL 400



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 178/377 (47%), Gaps = 23/377 (6%)

Query: 27  EVYKNFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           E+Y + +   + DK  +    L+ L L+ N + +L  D+ +L  L  LN+  N +S+LP 
Sbjct: 41  EMYLDCNHIKDLDKPLFRCRKLKILSLSENEVIRLPSDIAHLTYLEELNLKGNDVSDLPE 100

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            I     LK LD+S N I ++P  I   T++     +   L ++P  +G+  NL   +  
Sbjct: 101 EIKNCIQLKILDLSSNPITRLPPTISQLTSMTSLGLNDISLTQMPHDIGQLRNLRSLEVR 160

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
            N + ++P  ++   ++ +LD+  N+L  L N  I+    L EL   +N L  +PE+I  
Sbjct: 161 ENLLRTVPPSISQLKQLRRLDLGHNELDDLPNE-ISMLENLEELYVDQNDLEALPESIVQ 219

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG-----KLSKLGTLDL 260
              L +LD+ +N+++ +P  I     L +  +  N L  LP+ +G      LS L  L L
Sbjct: 220 CRSLEQLDVSENKLMLLPDEIGDLEKLDDLTVSQNCLQVLPSSIGNNHLRSLSLLEALFL 279

Query: 261 HSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
               L  + +     +LS+L    N+++ L P IG    L ++ LT N L  + SSL N 
Sbjct: 280 GITMLY-FPITGRLKKLSMLKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGN- 337

Query: 321 PTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
                LK LR+  L +N+  E   T    I   T LSV    LSL    +  +P EI   
Sbjct: 338 -----LKSLRTLNLDKNQLKELPPT----IGGCTSLSV----LSLRDNLIEQLPLEIGRL 384

Query: 380 GEITKLDLSRNSIQELP 396
             +  LD+  N +  LP
Sbjct: 385 ENLRVLDVCNNRLNYLP 401



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 174/388 (44%), Gaps = 47/388 (12%)

Query: 21  LRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKL 80
           L+ +P+++ +N            A  L+++ L  N+I+ L + L     L +L++S N++
Sbjct: 25  LQSIPHDIDRN------------ARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEV 72

Query: 81  SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLS 140
             LP+ I  L  L+ L++  N +  +P+EI +   L   D SSN +  LP ++ +  +++
Sbjct: 73  IRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMT 132

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               ++  +T +P D+     +  L+V                         +NLL  +P
Sbjct: 133 SLGLNDISLTQMPHDIGQLRNLRSLEVR------------------------ENLLRTVP 168

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
            +I  L +L RLDL  N +  +P+ IS   +L E Y+  N L ALP  + +   L  LD+
Sbjct: 169 PSISQLKQLRRLDLGHNELDDLPNEISMLENLEELYVDQNDLEALPESIVQCRSLEQLDV 228

Query: 261 HSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             N+L     E   L +L  L +S N L  LP  IG    LR L        +L  +L  
Sbjct: 229 SENKLMLLPDEIGDLEKLDDLTVSQNCLQVLPSSIGN-NHLRSL--------SLLEALFL 279

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEA 379
           G T  L   +  RL +    +A       +T A        E+ L    L+ IPS +   
Sbjct: 280 GIT-MLYFPITGRLKKLSMLKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNL 338

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQV 407
             +  L+L +N ++ELPP +  C SL V
Sbjct: 339 KSLRTLNLDKNQLKELPPTIGGCTSLSV 366



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 109/244 (44%), Gaps = 27/244 (11%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L HN ++ L  ++  L  L  L V  N L  LP +I +   L+ LDVS N +M +
Sbjct: 177 LRRLDLGHNELDDLPNEISMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMLL 236

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLG--------------------------RCLNLS 140
           PDEIG    L     S N L+ LPSS+G                          R   LS
Sbjct: 237 PDEIGDLEKLDDLTVSQNCLQVLPSSIGNNHLRSLSLLEALFLGITMLYFPITGRLKKLS 296

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
             KA  N IT L   +  C  ++++ +  N LT + ++L  +   L  L   KN L  +P
Sbjct: 297 MLKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSL-GNLKSLRTLNLDKNQLKELP 355

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
            TIG  + L  L L  N I  +P  I    +L    + NN L+ LP  +  L KL  L L
Sbjct: 356 PTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNYLPFTVNVLFKLRALWL 415

Query: 261 HSNQ 264
             NQ
Sbjct: 416 SENQ 419



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 123/261 (47%), Gaps = 19/261 (7%)

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++  LD     L  + +++  +   L E+    N +  + + +    +L  L L +N ++
Sbjct: 14  QVDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEVI 73

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
            +PS I+    L E  +  N +S LP E+    +L  LDL SN +        QL  ++ 
Sbjct: 74  RLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMTS 133

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L++ SL+ +P +IG++  LR L +  N LRT+       P+ + LK LR RL    + 
Sbjct: 134 LGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTV------PPSISQLKQLR-RLDLGHNE 186

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                 E  I+M   L    +EL ++  +L A+P  I +   + +LD+S N +  LP E+
Sbjct: 187 LDDLPNE--ISMLENL----EELYVDQNDLEALPESIVQCRSLEQLDVSENKLMLLPDEI 240

Query: 400 SSCASLQVKFSDLVTNKESCI 420
                L     D +T  ++C+
Sbjct: 241 GDLEKL-----DDLTVSQNCL 256


>gi|16924000|ref|NP_476483.1| leucine-rich repeat-containing protein 7 [Rattus norvegicus]
 gi|1657758|gb|AAC52881.1| densin-180 [Rattus norvegicus]
 gi|149026336|gb|EDL82579.1| rCG28757, isoform CRA_b [Rattus norvegicus]
          Length = 1495

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 153/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 32  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 80  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 139

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 140 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 199

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 200 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 258

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 259 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 318

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LPP IG + +LR L +  N
Sbjct: 319 LPPTIGYLHSLRTLAVDEN 337



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 166 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 225

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 226 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 285

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 286 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 344

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 345 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 404

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 405 DNQSKALIP 413



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 122/320 (38%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 24  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 83

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 84  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 119

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 120 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 165

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 166 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 201

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 202 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N I+ +  ++S C +L+
Sbjct: 242 MSKNRIETVDMDISGCEALE 261


>gi|384872582|sp|P70587.2|LRRC7_RAT RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
          Length = 1490

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 153/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 195 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LPP IG + +LR L +  N
Sbjct: 314 LPPTIGYLHSLRTLAVDEN 332



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 280

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 281 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 339

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 400 DNQSKALIP 408



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 122/320 (38%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 19  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 79  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 115 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 160

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 161 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 196

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 197 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 236

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N I+ +  ++S C +L+
Sbjct: 237 MSKNRIETVDMDISGCEALE 256


>gi|149026335|gb|EDL82578.1| rCG28757, isoform CRA_a [Rattus norvegicus]
          Length = 1506

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 153/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 43  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 90

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 91  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 150

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 151 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 210

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 211 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 269

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 270 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 329

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LPP IG + +LR L +  N
Sbjct: 330 LPPTIGYLHSLRTLAVDEN 348



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 177 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 236

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 237 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 296

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 297 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 355

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 356 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 415

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 416 DNQSKALIP 424



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 122/320 (38%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 35  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 94

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 95  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 130

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 131 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 176

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 177 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 212

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 213 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 252

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N I+ +  ++S C +L+
Sbjct: 253 MSKNRIETVDMDISGCEALE 272


>gi|50400980|sp|Q80TE7.2|LRRC7_MOUSE RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
          Length = 1490

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 153/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 195 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LPP IG + +LR L +  N
Sbjct: 314 LPPTIGYLHSLRTLAVDEN 332



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 280

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 281 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 339

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 400 DNQSKALIP 408



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 122/320 (38%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 19  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 79  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 115 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 160

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 161 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 196

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 197 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 236

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N I+ +  ++S C +L+
Sbjct: 237 MSKNRIETVDMDISGCEALE 256


>gi|410940571|ref|ZP_11372375.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410784315|gb|EKR73302.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 354

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 142/266 (53%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQKL L  N +  L +++  L  L  L++  NKL+ LP  I +L  LK+LD+  N ++ 
Sbjct: 65  NLQKLDLGGNELTALSKEIVQLQNLQELSLHSNKLTSLPKEIEQLRSLKNLDLFRNQLVT 124

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P E+     L K + S N+L  +P  +G+  NL   K S+N I SLP+++    ++ + 
Sbjct: 125 VPKEVLLLQTLEKLNLSLNRLSTIPKEVGQLKNLQTLKLSDNQIVSLPKEIEGLQELKEF 184

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N         +     L +L  S+N L  +P+ IG L  L  L L +N+I  +P+ 
Sbjct: 185 ILGNNHFKNFPGE-VLQLKNLQKLNLSENQLVSIPKEIGQLQNLRDLVLDRNQITILPTE 243

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +    +L E ++  N L++L  E+ +L  L  L L +N+L     E  QL+ L  L+L N
Sbjct: 244 VLQLQNLQELHLSENQLTSLSKEIDQLKNLQWLSLRNNRLTTLPKEIGQLKNLQRLELGN 303

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N L+ LP EIG++  L++L L  NPL
Sbjct: 304 NQLTNLPKEIGQLKGLQRLELDSNPL 329



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 144/316 (45%), Gaps = 40/316 (12%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+SF ++   P EIG    L K D   N+L  L   + +  NL +    +N +TSL
Sbjct: 43  VRILDLSFQNLTTFPKEIGQLKNLQKLDLGGNELTALSKEIVQLQNLQELSLHSNKLTSL 102

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+L  +   ++   T L +L  S N L+ +P+ +G L  L  L
Sbjct: 103 PKEIEQLRSLKNLDLFRNQLVTVPKEVLLLQT-LEKLNLSLNRLSTIPKEVGQLKNLQTL 161

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  N+I+S+P  I G   L EF +GNN     P E+ +L  L  L+L  NQL       
Sbjct: 162 KLSDNQIVSLPKEIEGLQELKEFILGNNHFKNFPGEVLQLKNLQKLNLSENQL------- 214

Query: 273 CQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL-LKYLRS 331
                            +P EIG++  LR L+L  N +  L       PT  L L+ L+ 
Sbjct: 215 ---------------VSIPKEIGQLQNLRDLVLDRNQITIL-------PTEVLQLQNLQE 252

Query: 332 -RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             L EN+ +  S   + L  +          LSL    L+ +P EI +   + +L+L  N
Sbjct: 253 LHLSENQLTSLSKEIDQLKNLQW--------LSLRNNRLTTLPKEIGQLKNLQRLELGNN 304

Query: 391 SIQELPPELSSCASLQ 406
            +  LP E+     LQ
Sbjct: 305 QLTNLPKEIGQLKGLQ 320



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 33/198 (16%)

Query: 9   RTSGSLNLSNRSLRDVPNEV--YKNFDEAGEGD-------KWWEAV-DLQKLILAHNNIE 58
           +T   LNLS   L  +P EV   KN       D       K  E + +L++ IL +N+ +
Sbjct: 133 QTLEKLNLSLNRLSTIPKEVGQLKNLQTLKLSDNQIVSLPKEIEGLQELKEFILGNNHFK 192

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
               ++  L  L  LN+S N+L  +P  IG+L  L+ L +  N I  +P E+     L +
Sbjct: 193 NFPGEVLQLKNLQKLNLSENQLVSIPKEIGQLQNLRDLVLDRNQITILPTEVLQLQNLQE 252

Query: 119 FDCSSNQL----KE-------------------LPSSLGRCLNLSDFKASNNCITSLPED 155
              S NQL    KE                   LP  +G+  NL   +  NN +T+LP++
Sbjct: 253 LHLSENQLTSLSKEIDQLKNLQWLSLRNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKE 312

Query: 156 LADCSKMSKLDVEGNKLT 173
           +     + +L+++ N L+
Sbjct: 313 IGQLKGLQRLELDSNPLS 330



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 13/138 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +L+ L+L  N I  L  ++  L  L  L
Sbjct: 207 LNLSENQLVSIPKEI-------------GQLQNLRDLVLDRNQITILPTEVLQLQNLQEL 253

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N+L+ L   I +L  L+ L +  N +  +P EIG    L + +  +NQL  LP  +
Sbjct: 254 HLSENQLTSLSKEIDQLKNLQWLSLRNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEI 313

Query: 134 GRCLNLSDFKASNNCITS 151
           G+   L   +  +N ++S
Sbjct: 314 GQLKGLQRLELDSNPLSS 331


>gi|20373163|ref|NP_598850.1| protein scribble homolog [Mus musculus]
 gi|16974785|gb|AAL32469.1|AF441233_1 PDZ-domain protein scribble [Mus musculus]
 gi|148697572|gb|EDL29519.1| scribbled homolog (Drosophila), isoform CRA_f [Mus musculus]
          Length = 1665

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTEL-------------IASKNLLNGMPETI 203
                                    S   L EL             + S+NLL  +PE I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 323 HLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTH 379



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPH 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|418727618|ref|ZP_13286206.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958976|gb|EKO22753.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 377

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 129/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 294 EIEQLKNLQTLFLSNNQLTIL 314



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 161/364 (44%), Gaps = 45/364 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 289 KTLPKEI----------------------------EQLKNLQT--------LFLSNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF--SDLVTNKE-----SCISGC 423
            +P EI +   +  L L  N +  LP E+    +LQ  +  ++ ++++E       I  C
Sbjct: 313 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQLSSQEKKRTRKLIPKC 372

Query: 424 YLYW 427
            +Y+
Sbjct: 373 QIYF 376



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 122/245 (49%), Gaps = 2/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 116 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P  
Sbjct: 236 YLSDNQLITLPKE-IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSG 289
           N LS 
Sbjct: 355 NQLSS 359



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 134/318 (42%), Gaps = 61/318 (19%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S   +  +P EIG    L +     NQL  LP  + +  NL      +N +T+L
Sbjct: 48  VRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+LTVL                        P+ I  L  L  L
Sbjct: 108 PKEIEQLKNLQVLDLGSNQLTVL------------------------PQEIEQLKNLQLL 143

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            LH NR+ ++   I    +L    + NN L+ LP E+ +L  L +L L  NQ   +  E 
Sbjct: 144 YLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 203

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L VL L+NN ++ LP EI K+  L+ L L+ N L TL   +              
Sbjct: 204 GQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI-------------- 249

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                         E L  + T        L L    L+ +P E+ +   +  LDL  N 
Sbjct: 250 --------------EQLKNLQT--------LDLSYNQLTILPKEVGQLENLQTLDLRNNQ 287

Query: 392 IQELPPELSSCASLQVKF 409
           ++ LP E+    +LQ  F
Sbjct: 288 LKTLPKEIEQLKNLQTLF 305



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339


>gi|124486885|ref|NP_001074827.1| leucine-rich repeat-containing protein 7 [Mus musculus]
          Length = 1542

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 153/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 32  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 80  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 139

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 140 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 199

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 200 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 258

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 259 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 318

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LPP IG + +LR L +  N
Sbjct: 319 LPPTIGYLHSLRTLAVDEN 337



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 166 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 225

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 226 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 285

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 286 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPR 344

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ +L  L+L  N+LK       +L+ L+ L LS
Sbjct: 345 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSFTKLKELAALWLS 404

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 405 DNQSKALIP 413



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 122/320 (38%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 24  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 83

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 84  NDLSSLPTS------------------------IASLVNLKELDISKNGVQEFPENIKCC 119

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 120 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 165

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 166 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 201

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 202 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 241

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N I+ +  ++S C +L+
Sbjct: 242 MSKNRIETVDMDISGCEALE 261


>gi|148697571|gb|EDL29518.1| scribbled homolog (Drosophila), isoform CRA_e [Mus musculus]
          Length = 1646

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTEL-------------IASKNLLNGMPETI 203
                                    S   L EL             + S+NLL  +PE I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 323 HLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTH 379



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPH 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|418708997|ref|ZP_13269797.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770927|gb|EKR46140.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 595

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 155/339 (45%), Gaps = 11/339 (3%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  LN+  N L+ LP  IG+L  L+ LD+  N +   P  I     L   D S N+L  L
Sbjct: 73  LQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIIL 132

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+ +GR  NL D     N +T+ P+++     + KL +  N+LT L    I     L  L
Sbjct: 133 PNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE-IGQLKNLQTL 191

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N    +P+ IG L  L  L+L  N++ ++P  I    +L + Y+ NN L+  P E+
Sbjct: 192 DLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEI 251

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L  L    N+L     E  QL+ L  L+L NN L+  P EIG++  L+ L L  N
Sbjct: 252 GQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN 311

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
           PL       +    P       S L   E +E    +   + +A    +   ELSLE  +
Sbjct: 312 PLSLKERKRIQKLFPD------SNLDLREVAENGVYRN--LNLAQEEPLKVFELSLEYKD 363

Query: 369 LS-AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            S + P  I +   +  L+L       LP E+S   +L+
Sbjct: 364 FSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLK 402



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 133/294 (45%), Gaps = 43/294 (14%)

Query: 17  SNRSLRDVP-NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIE----KLKEDLRNLPLLT 71
           SN  LR+V  N VY+N + A E     E + + +L L + +      K+    RNL    
Sbjct: 328 SNLDLREVAENGVYRNLNLAQE-----EPLKVFELSLEYKDFSQSFPKVILKFRNL---R 379

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            LN+     S LP  I  L  LK L +  N +  IP EIG    L   +  +N+L+ LP 
Sbjct: 380 GLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPK 439

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 440 EIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 482

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++ + I    +L E  + +N  + LP E+GK
Sbjct: 483 -------FPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGK 535

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           L KL TLDL +NQL     E  QL+ L  L L NN LS     + +   +RKLL
Sbjct: 536 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS-----LKEQERIRKLL 584



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 164/390 (42%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+S N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    +              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLTAEIGQLQ------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 563



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 186/462 (40%), Gaps = 89/462 (19%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL---------------SNN 178
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L               S+N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDN 219

Query: 179 LIASWTM-------LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
            +A+  +       L +L    N L   P+ IG L  L  L   +NR+ ++P  +    +
Sbjct: 220 QLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQN 279

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL-------------------------- 265
           L    + NN L+  P E+G+L  L  L+L  N L                          
Sbjct: 280 LQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENG 339

Query: 266 --------KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                   +E  ++  +L L   D S       P  I K   LR L L      TL   +
Sbjct: 340 VYRNLNLAQEEPLKVFELSLEYKDFS----QSFPKVILKFRNLRGLNLYDCGFSTLPKEI 395

Query: 318 VNGPTPALLKYLRSRLP--ENEDSEASTTK--EDLITMATRLSVTSKE---------LSL 364
                   LKYL   L   +N  SE    K  E L   A  L    KE         LSL
Sbjct: 396 SRLKN---LKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSL 452

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
               L   P+EI +  ++ KLDLS N     P E+    +LQ
Sbjct: 453 HQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 133/290 (45%), Gaps = 35/290 (12%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S   +T+LP+++     + +L+++ N LT L    I     L 
Sbjct: 39  DLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKE-IGQLENLQ 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           EL    N L   P  I  L +L  LDL +NR++ +P+ I    +L +  +  N L+  P 
Sbjct: 98  ELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L  L L  N+L     E  QL+ L  LDL +N  + LP EIG++  L+ L L+
Sbjct: 158 EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLS 217

Query: 307 GNPLRTLRSSLVNGPTPALLK-YLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL-SL 364
            N L TL   +  G    L K YLR+                      RL+V  KE+  L
Sbjct: 218 DNQLATLPVEI--GQLQNLQKLYLRN---------------------NRLTVFPKEIGQL 254

Query: 365 EGMN--------LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           + +         L+A+P E+ +   +  L+L  N +   P E+    +LQ
Sbjct: 255 QNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQ 304



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 98/228 (42%), Gaps = 23/228 (10%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
            P  I +   L+ L++       +P EI     L       N LK +PS +G+  NL   
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 427

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
               N +  LP+++     + KL +  N L +     I     L +L  S N     P+ 
Sbjct: 428 NLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKE 486

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L+L +N++ ++ + I    +L E  + +N  + LP E+GKL KL TLDL  
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLR- 545

Query: 263 NQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
                                NN L+ LP EIG++  L+ L L  N L
Sbjct: 546 ---------------------NNQLTTLPTEIGQLQNLQWLYLQNNQL 572


>gi|198429521|ref|XP_002125267.1| PREDICTED: similar to Suppressor Of Clr family member (soc-2)
           [Ciona intestinalis]
          Length = 733

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 184/402 (45%), Gaps = 54/402 (13%)

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
           N+ ++ +++ ++  L  L  ++NKL E+P+ + +L  L+++ +  N++  +P+ +     
Sbjct: 25  NLNEVPKEVFDITELQCLVANNNKLKEIPSDVRKLSCLQAISLRGNALTSLPESLCDLKY 84

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L   +CS NQ+K LP  +G   NL    A+ NC+T LP  ++   ++  L + GN++T L
Sbjct: 85  LEYLECSDNQIKSLPHRIGNLKNLIQLYANRNCLTELPVGISYLWQLEVLGLNGNRITHL 144

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
              +      +  L  S N LN +P  I  + +L++L L  N+I S+PS+I    SL + 
Sbjct: 145 PIEMGQFLEQIRILGLSNNCLNALPTAICRMRKLVKLGLSGNKISSLPSTIRRLESLIDL 204

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-------------------- 275
            + +N L  LP++L  L  L  L L  N L+       +L                    
Sbjct: 205 RLDDNRLRFLPSQLFTLKSLEELALSRNFLRRVHSHVSRLPSLRCLGMNHNQISFVPHQI 264

Query: 276 ----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
               +L +L L +N L+ LPPE+GK+ TLR+L +  N     R        P  L  LR+
Sbjct: 265 GDCSKLEILGLESNHLTQLPPELGKLFTLRELYIGKNRFSGARC------IPESLSRLRN 318

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN---------------------LS 370
                 D   +  K+  + + T  S+   +LS   +N                     L 
Sbjct: 319 L--TVLDVAGNQVKDLPLELKTASSLNEVKLSKNVLNHLPVALCSLVDVILLDVSDNKLK 376

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL-QVKFSD 411
            IP +I     + K+ LSRN+ ++ P EL     L ++ FS+
Sbjct: 377 CIPRDIRNLSSLRKIILSRNNFKQFPTELCHVTQLEEINFSN 418



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 164/365 (44%), Gaps = 23/365 (6%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L  N +  L   L  L  L  L +S N L  + + +  L  L+ L ++ N I  +P +
Sbjct: 204 LRLDDNRLRFLPSQLFTLKSLEELALSRNFLRRVHSHVSRLPSLRCLGMNHNQISFVPHQ 263

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS---LPEDLADCSKMSKLD 166
           IG  + L      SN L +LP  LG+   L +     N  +    +PE L+    ++ LD
Sbjct: 264 IGDCSKLEILGLESNHLTQLPPELGKLFTLRELYIGKNRFSGARCIPESLSRLRNLTVLD 323

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V GN++  L   L  + + L E+  SKN+LN +P  + SL  +I LD+  N++  IP  I
Sbjct: 324 VAGNQVKDLPLEL-KTASSLNEVKLSKNVLNHLPVALCSLVDVILLDVSDNKLKCIPRDI 382

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               SL +  +  N     P EL  +++L  ++  +N +     E   L RL+ +D+S+N
Sbjct: 383 RNLSSLRKIILSRNNFKQFPTELCHVTQLEEINFSNNLISTIPREISFLKRLTEIDISHN 442

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-EDSEASTT 344
                P E+  +  LR L ++GN L  +         P   K+      EN E    S  
Sbjct: 443 KFQQFPRELCGVVGLRALDVSGNQLTDI---------PYEFKFF-----ENLERLNLSDN 488

Query: 345 KEDLITMATRLSVTSKELSLE---GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
           + D   +      T KEL  +   G  L  +P  I E   +  + L  N IQ LP  +S+
Sbjct: 489 QFDEFPIRVCFVTTLKELHFDQKCGRKLELVPEHICELEHLENISLDHNQIQNLPESISN 548

Query: 402 CASLQ 406
           C SL+
Sbjct: 549 CRSLR 553



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 177/374 (47%), Gaps = 26/374 (6%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L+ N + ++   +  LP L  L ++HN++S +P  IG+   L+ L +  N + ++
Sbjct: 224 LEELALSRNFLRRVHSHVSRLPSLRCLGMNHNQISFVPHQIGDCSKLEILGLESNHLTQL 283

Query: 107 PDEIGSATALVKFDCSSNQL---KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
           P E+G    L +     N+    + +P SL R  NL+    + N +  LP +L   S ++
Sbjct: 284 PPELGKLFTLRELYIGKNRFSGARCIPESLSRLRNLTVLDVAGNQVKDLPLELKTASSLN 343

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELI---ASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++ +  N L    N+L  +   L ++I    S N L  +P  I +LS L ++ L +N   
Sbjct: 344 EVKLSKNVL----NHLPVALCSLVDVILLDVSDNKLKCIPRDIRNLSSLRKIILSRNNFK 399

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
             P+ +     L E    NN +S +P E+  L +L  +D+  N+ +++  E C +  L  
Sbjct: 400 QFPTELCHVTQLEEINFSNNLISTIPREISFLKRLTEIDISHNKFQQFPRELCGVVGLRA 459

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGN-----PLR-----TLRSSLVNGPTPALLKYL 329
           LD+S N L+ +P E      L +L L+ N     P+R     TL+    +      L+ +
Sbjct: 460 LDVSGNQLTDIPYEFKFFENLERLNLSDNQFDEFPIRVCFVTTLKELHFDQKCGRKLELV 519

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTS----KELSLEGMNLSAIPSEIWEAGEITKL 385
              + E E  E  +   + I      S+++    ++LS+ G  L  +P  I E   +  L
Sbjct: 520 PEHICELEHLENISLDHNQIQNLPE-SISNCRSLRKLSVVGNVLEKLPESICELPNLKSL 578

Query: 386 DLSRNSIQELPPEL 399
           DL  N + ELP ++
Sbjct: 579 DLKGNQLTELPTQI 592



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 121/259 (46%), Gaps = 7/259 (2%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           VD+  L ++ N ++ +  D+RNL  L  + +S N   + P  +  +  L+ ++ S N I 
Sbjct: 363 VDVILLDVSDNKLKCIPRDIRNLSSLRKIILSRNNFKQFPTELCHVTQLEEINFSNNLIS 422

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            IP EI     L + D S N+ ++ P  L   + L     S N +T +P +      + +
Sbjct: 423 TIPREISFLKRLTEIDISHNKFQQFPRELCGVVGLRALDVSGNQLTDIPYEFKFFENLER 482

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNL---LNGMPETIGSLSRLIRLDLHQNRILS 221
           L++  N+        +   T L EL   +     L  +PE I  L  L  + L  N+I +
Sbjct: 483 LNLSDNQFDEFPIR-VCFVTTLKELHFDQKCGRKLELVPEHICELEHLENISLDHNQIQN 541

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSV 279
           +P SIS C SL +  +  N L  LP  + +L  L +LDL  NQL E   +  +L  +LS 
Sbjct: 542 LPESISNCRSLRKLSVVGNVLEKLPESICELPNLKSLDLKGNQLTELPTQIHRLEKQLSH 601

Query: 280 LDLSNNSLSGLPPEIGKMT 298
           + L  N L   P ++  MT
Sbjct: 602 ISLGENPLKD-PLKVVAMT 619



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 126/277 (45%), Gaps = 7/277 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L +A N ++ L  +L+    L  + +S N L+ LP A+  L  +  LDVS N +  
Sbjct: 318 NLTVLDVAGNQVKDLPLELKTASSLNEVKLSKNVLNHLPVALCSLVDVILLDVSDNKLKC 377

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP +I + ++L K   S N  K+ P+ L     L +   SNN I+++P +++   +++++
Sbjct: 378 IPRDIRNLSSLRKIILSRNNFKQFPTELCHVTQLEEINFSNNLISTIPREISFLKRLTEI 437

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  NK       L      L  L  S N L  +P        L RL+L  N+    P  
Sbjct: 438 DISHNKFQQFPREL-CGVVGLRALDVSGNQLTDIPYEFKFFENLERLNLSDNQFDEFPIR 496

Query: 226 ISGCCSLAEFYMGNNA---LSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVL 280
           +    +L E +        L  +P  + +L  L  + L  NQ++     +  C+  L  L
Sbjct: 497 VCFVTTLKELHFDQKCGRKLELVPEHICELEHLENISLDHNQIQNLPESISNCR-SLRKL 555

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            +  N L  LP  I ++  L+ L L GN L  L + +
Sbjct: 556 SVVGNVLEKLPESICELPNLKSLDLKGNQLTELPTQI 592


>gi|456823117|gb|EMF71587.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 389

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 128/258 (49%), Gaps = 9/258 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L TLDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPL 310
           EI ++  L+ L L+ N L
Sbjct: 294 EIEQLKNLQTLFLSNNQL 311



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 122/243 (50%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTL 313
           +TL
Sbjct: 289 KTL 291



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 120/245 (48%), Gaps = 2/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 116 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P  
Sbjct: 236 YLSDNQLITLPKE-IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L  LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLSNNQLIILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSG 289
           N  S 
Sbjct: 355 NQFSS 359



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 147/311 (47%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L  LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLIILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 134/318 (42%), Gaps = 61/318 (19%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S   +  +P EIG    L +     NQL  LP  + +  NL      +N +T+L
Sbjct: 48  VRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+LTVL                        P+ I  L  L  L
Sbjct: 108 PKEIEQLKNLQVLDLGSNQLTVL------------------------PQEIEQLKNLQLL 143

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            LH NR+ ++   I    +L    + NN L+ LP E+ +L  L +L L  NQ   +  E 
Sbjct: 144 YLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 203

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L VL L+NN ++ LP EI K+  L+ L L+ N L TL   +              
Sbjct: 204 GQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI-------------- 249

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                         E L  + T        L L    L+ +P E+ +   +  LDL  N 
Sbjct: 250 --------------EQLKNLQT--------LDLSYNQLTILPKEVGQLENLQTLDLRNNQ 287

Query: 392 IQELPPELSSCASLQVKF 409
           ++ LP E+    +LQ  F
Sbjct: 288 LKTLPKEIEQLKNLQTLF 305



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  L++LD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +  LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLIILPQEIGKLKNLLWLSLVYNQLTTLPN 339


>gi|380015607|ref|XP_003691791.1| PREDICTED: protein lap1-like [Apis florea]
          Length = 994

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 181/394 (45%), Gaps = 47/394 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L+N +L DVP +V+            +E   L+KL L  N I+ L   L     L VL
Sbjct: 22  LHLNNCNLYDVPPDVF-----------IYERT-LEKLYLDANRIKDLPRPLFQCHELRVL 69

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N+++ LP AI  L  L+ LD+S NSI ++PD I     L   D S N  +  P ++
Sbjct: 70  SLSDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAI 129

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
              + L +   ++  I  LP +    S +  L++  N L  L  ++ +    L  L    
Sbjct: 130 THIVGLRELYINDAYIEYLPANFGRLSALKTLELRENNLMTLPKSM-SRLINLQRLDIGN 188

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N    +PE +G L  L  L +  N I  IP +I+    L  F    NA+  +P+E+    
Sbjct: 189 NDFTELPEVVGDLINLTELWIDGNDIRRIPLNINQLYRLNHFDCTMNAIHIIPSEVEGWR 248

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +  + L SN++ +     C LR  V L + +N L+ LP +IG+M+ L +L++T N L  
Sbjct: 249 DISIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSNLEELIVTKNFLEY 308

Query: 313 LRSSLVNGPTPALLK----------YLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L SS+       LL+          YLR   PE             I   T LS+    L
Sbjct: 309 LPSSI------GLLRKLHCLNVDNNYLRCLPPE-------------IGSCTALSL----L 345

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           SL   NL+ +P E+     +  L+L  N I+ LP
Sbjct: 346 SLRSNNLTRVPPEVGHLSSLKVLNLVNNCIKFLP 379



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 126/238 (52%), Gaps = 8/238 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  NN+  L + +  L  L  L++ +N  +ELP  +G+L  L  L +  N I +I
Sbjct: 158 LKTLELRENNLMTLPKSMSRLINLQRLDIGNNDFTELPEVVGDLINLTELWIDGNDIRRI 217

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  I     L  FDC+ N +  +PS +    ++S    S+N I  LP+ L     +  L 
Sbjct: 218 PLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLK 277

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L  L N+ I   + L ELI +KN L  +P +IG L +L  L++  N +  +P  I
Sbjct: 278 VDDNQLNALPND-IGQMSNLEELIVTKNFLEYLPSSIGLLRKLHCLNVDNNYLRCLPPEI 336

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
             C +L+   + +N L+ +P E+G LS L  L+L +N     C++   L +S+L+LSN
Sbjct: 337 GSCTALSLLSLRSNNLTRVPPEVGHLSSLKVLNLVNN-----CIKF--LPVSMLNLSN 387



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 16/136 (11%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           RT  +L + +  L  +PN++              +  +L++LI+  N +E L   +  L 
Sbjct: 271 RTIVTLKVDDNQLNALPNDI-------------GQMSNLEELIVTKNFLEYLPSSIGLLR 317

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  LNV +N L  LP  IG    L  L +  N++ ++P E+G  ++L   +  +N +K 
Sbjct: 318 KLHCLNVDNNYLRCLPPEIGSCTALSLLSLRSNNLTRVPPEVGHLSSLKVLNLVNNCIKF 377

Query: 129 LPSSLGRCLNLSDFKA 144
           LP S+   LNLS+ KA
Sbjct: 378 LPVSM---LNLSNLKA 390


>gi|418667007|ref|ZP_13228423.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
 gi|410757251|gb|EKR18865.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
          Length = 564

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 178/388 (45%), Gaps = 30/388 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L  ++  L  L  L +S N+L+  P  IG+L  L+ LD++ N +  
Sbjct: 13  NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKT 72

Query: 106 IPDEIGSATALVKFDC---------SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +P EIG    L K +            NQL  LP+ +G+  NL     S N + +LP ++
Sbjct: 73  LPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREI 132

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
                +  LD+ GN+LT L    I     L EL  + N L  +P+ I  L  L  L L  
Sbjct: 133 GQLQNLKSLDLGGNQLTTLPRE-INKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKN 191

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
           NRI ++P  I    +L E  +  N L  LP E+G+L  L  L+L +N++K    E   L 
Sbjct: 192 NRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALE 251

Query: 277 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS------------LVNGPTP 323
            L + +LS N L+ +P EIG +  LR L L  N L+TL               L+N    
Sbjct: 252 NLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLS 311

Query: 324 ALLKYLRSRLP----ENEDSEASTTKEDL-ITMATRLSVTSKELSLEGMNLSAIPSEIWE 378
              K +++ LP    +  D E   T  +L + +   L + S  LSLE    S  P EI +
Sbjct: 312 EERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILS--LSLEYQEFSLFPKEILK 369

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQ 406
              +  L L   S+  LP E+     L+
Sbjct: 370 LKNLRSLSLYDTSLVALPKEIVRLKHLE 397



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 151/338 (44%), Gaps = 47/338 (13%)

Query: 80  LSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
           L+ LP  IG+L  L++L++  N +  +P EIG    L     S NQL   P  +G+  NL
Sbjct: 1   LTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENL 60

Query: 140 SDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGM 199
            +   + N + +LP+++    K+ KL+++GN++T L                  N L  +
Sbjct: 61  QELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTL---------------PKGNQLTTL 105

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           P  IG L  L  L L  NR+ ++P  I    +L    +G N L+ LP E+ KL  L  L 
Sbjct: 106 PAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELY 165

Query: 260 LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           L+ N+L     E  +L  L++L L NN +S LP EI K   L++L L GN L TL   + 
Sbjct: 166 LNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEI- 224

Query: 319 NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL---------SLEGMNL 369
                                      E+L     R+ +   E+         +L G  L
Sbjct: 225 ---------------------GELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKL 263

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           ++IP EI     +  L L  N ++ LP ++     L+V
Sbjct: 264 ASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 301



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 170/390 (43%), Gaps = 65/390 (16%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L +L++S+N+L+ LP  IG+L  LKSLD+  N +  +P EI     L +   + N+L  +
Sbjct: 115 LQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIV 174

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +    NL+  +  NN I++LP+++     + +L++ GN+L  L    I    +L EL
Sbjct: 175 PKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGE-IGELKLLEEL 233

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N +  +P  IG+L  L   +L  N++ SIP  I    +L   Y+ NN L  LP ++
Sbjct: 234 NLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQM 293

Query: 250 GKLSKLGTLDLHSNQL-------------------------------------------- 265
            KL  L  L+L  N L                                            
Sbjct: 294 EKLQDLEVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSL 353

Query: 266 ----KEYCV---EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
               +E+ +   E  +L+ L  L L + SL  LP EI ++  L +L L  N L++L   +
Sbjct: 354 SLEYQEFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEI 413

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                  LL+ LRS      D  A+   E L     RL    + L L        P EIW
Sbjct: 414 ------GLLRNLRSL-----DIGANNEFEVLPKEIARLQ-NLRSLLLNQNRFKIFPKEIW 461

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQV 407
           E  ++  L+++ N +  LP ++     LQ+
Sbjct: 462 ELKKLVILNVNTNQLDALPEKIGRLKGLQM 491



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 180/414 (43%), Gaps = 37/414 (8%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAG-EGDKW-------WEAVDLQKLILAHNNIEKLKE 62
           SL+L    L  +P E+   KN  E    G+K        WE  +L  L L +N I  L +
Sbjct: 140 SLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPK 199

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++     L  LN+  N+L  LP  IGEL +L+ L++  N I  +P+EIG+   L  F+ S
Sbjct: 200 EIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLS 259

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV--------EGNKLTV 174
            N+L  +P  +G   NL      NN + +LP  +     +  L++        E  K+  
Sbjct: 260 GNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLLSEERKKIQA 319

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L  N       + E    +NL   + + +  LS    L L        P  I    +L  
Sbjct: 320 LLPNCNIDLRDVEEGETYRNLNLALEQPLKILS----LSLEYQEFSLFPKEILKLKNLRS 375

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL-SNNSLSGLPP 292
             + + +L ALP E+ +L  L  L L  NQLK    E   LR L  LD+ +NN    LP 
Sbjct: 376 LSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPK 435

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EI ++  LR LLL  N  +           P  +  L+  +  N ++       + I   
Sbjct: 436 EIARLQNLRSLLLNQNRFKIF---------PKEIWELKKLVILNVNTNQLDALPEKIGRL 486

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             L +    L L    L+ +PSEI +   +T+L L  N I+ LP E++   +L+
Sbjct: 487 KGLQM----LDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLR 536



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 102/239 (42%), Gaps = 47/239 (19%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++ + + S  P  I +L  L+SL +   S++ +P EI     L +     NQLK LP  
Sbjct: 353 LSLEYQEFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKE 412

Query: 133 LGRCLNLSDFK-ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           +G   NL      +NN    LP+++A    +  L +  N+  +                 
Sbjct: 413 IGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKI----------------- 455

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ I  L +L+ L+++ N++ ++P  I     L    + +N L+ LP+E+G+
Sbjct: 456 -------FPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQ 508

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  L L  N++K                       LP EI ++  LRKL L  NP+
Sbjct: 509 LHNLTELYLQYNRIK----------------------TLPEEIARLQNLRKLTLYENPI 545



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 62/118 (52%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           A+N  E L +++  L  L  L ++ N+    P  I EL  L  L+V+ N +  +P++IG 
Sbjct: 426 ANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGR 485

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
              L   D S N+L  LPS +G+  NL++     N I +LPE++A    + KL +  N
Sbjct: 486 LKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 543


>gi|404371791|ref|ZP_10977093.1| hypothetical protein CSBG_00910 [Clostridium sp. 7_2_43FAA]
 gi|226912083|gb|EEH97284.1| hypothetical protein CSBG_00910 [Clostridium sp. 7_2_43FAA]
          Length = 632

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 187/394 (47%), Gaps = 48/394 (12%)

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           L  N+I ++ E++  L  L  L +S N+L+++P  IG +  L+ LDVS NS+  +P EIG
Sbjct: 126 LDGNHINEIPEEIVKLESLDKLILSRNRLNKVPTYIGAMKKLRWLDVSKNSLTSLPKEIG 185

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +   L + D S N++KE+PS +     L    A  N +T+ P D+     + +L++  N 
Sbjct: 186 NIITLDRLDISQNKIKEIPSEINNLKKLIRLLAYENELTTFPSDIVGLPVLRELNLFNNM 245

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           +T L +N I S+  L  L   +N L  +PE+IG L +L  L ++ N ++++P +I     
Sbjct: 246 ITELPDN-IGSFPELMYLRIGENKLTSLPESIGELEKLFTLSVNNNELINLPDNIINLSK 304

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK----------------------EYC 269
           L E  + NN L  LP  +G+L+ +  L+L +N +K                       + 
Sbjct: 305 LTEINLSNNKLERLPDNIGRLTSVKELNLDNNNIKIFPDLSNLVDLKTIYISNNNIINFE 364

Query: 270 VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY- 328
           ++     +  +DLS N L+ +P     +  ++ L L+ N +  ++  + +  + + L   
Sbjct: 365 IDFLPTSVQYIDLSRNLLTSVPI----IENIKHLDLSFNKIENIQEGIKSMNSISYLGLN 420

Query: 329 --LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
             L   LP+        T  D+IT+          ++L    L  IPSE      +  L 
Sbjct: 421 GNLIKTLPK--------TIGDMITLTG--------INLSNNKLVEIPSEFGNLVNLQGLY 464

Query: 387 LSRNSIQELPPELSSCASLQVKFSDLVTNKESCI 420
           LS N + E+P  L S  +L  +F  L  N+ + I
Sbjct: 465 LSNNELLEIPNTLGSITAL--RFLSLDNNRLTII 496



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 145/287 (50%), Gaps = 17/287 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L +N I +L +++ + P L  L +  NKL+ LP +IGEL  L +L V+ N ++ +
Sbjct: 236 LRELNLFNNMITELPDNIGSFPELMYLRIGENKLTSLPESIGELEKLFTLSVNNNELINL 295

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE--DLADCSKMSK 164
           PD I + + L + + S+N+L+ LP ++GR  ++ +    NN I   P+  +L D   +  
Sbjct: 296 PDNIINLSKLTEINLSNNKLERLPDNIGRLTSVKELNLDNNNIKIFPDLSNLVDLKTIYI 355

Query: 165 LDVEGNKLTV-----------LSNNLIASWTML---TELIASKNLLNGMPETIGSLSRLI 210
            +       +           LS NL+ S  ++     L  S N +  + E I S++ + 
Sbjct: 356 SNNNIINFEIDFLPTSVQYIDLSRNLLTSVPIIENIKHLDLSFNKIENIQEGIKSMNSIS 415

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            L L+ N I ++P +I    +L    + NN L  +P+E G L  L  L L +N+L E   
Sbjct: 416 YLGLNGNLIKTLPKTIGDMITLTGINLSNNKLVEIPSEFGNLVNLQGLYLSNNELLEIPN 475

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
               +  L  L L NN L+ +P EIG +  L+K+ L+ N L  L  S
Sbjct: 476 TLGSITALRFLSLDNNRLTIIPKEIGTIEKLKKVDLSNNYLTKLEFS 522



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 76/130 (58%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +++ L L+ N IE ++E ++++  ++ L ++ N +  LP  IG++  L  +++S N +++
Sbjct: 390 NIKHLDLSFNKIENIQEGIKSMNSISYLGLNGNLIKTLPKTIGDMITLTGINLSNNKLVE 449

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IP E G+   L     S+N+L E+P++LG    L      NN +T +P+++    K+ K+
Sbjct: 450 IPSEFGNLVNLQGLYLSNNELLEIPNTLGSITALRFLSLDNNRLTIIPKEIGTIEKLKKV 509

Query: 166 DVEGNKLTVL 175
           D+  N LT L
Sbjct: 510 DLSNNYLTKL 519



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 50/90 (55%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + + L  + L++N + ++  +  NL  L  L +S+N+L E+P  +G +  L+ L +  N 
Sbjct: 433 DMITLTGINLSNNKLVEIPSEFGNLVNLQGLYLSNNELLEIPNTLGSITALRFLSLDNNR 492

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           +  IP EIG+   L K D S+N L +L  S
Sbjct: 493 LTIIPKEIGTIEKLKKVDLSNNYLTKLEFS 522


>gi|428177017|gb|EKX45899.1| hypothetical protein GUITHDRAFT_52416, partial [Guillardia theta
           CCMP2712]
          Length = 309

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 165/311 (53%), Gaps = 18/311 (5%)

Query: 13  SLNLSNRSLRDVPNEVY--KNFDEAGEGDKWWEAVD--------LQKLILAHNNIEKLKE 62
           SLN+    L D+P  V+  KN +     + +   +         L +L L  N I+ L E
Sbjct: 4   SLNVGKNKLSDLPVAVFSLKNLEVLNCSENFLSELPSNVACFAALTELDLNDNKIKTLPE 63

Query: 63  DL-RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           D+ R  P L  L +  N+++ LPA++G+L  L+ L+V  N ++KIP  +G+ ++L++ + 
Sbjct: 64  DIGRFFPRLRKLLMYQNEITSLPASLGDLQELEELNVFNNKLIKIPGCVGTLSSLIELNV 123

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +SN+LK LPS L    NL    A +N I  LP  L   SK+ KL++  N+L  L    +A
Sbjct: 124 ASNKLKTLPS-LDGLTNLQRLAAFDNNIVLLPT-LEKLSKIKKLELYRNQLDSLPQ--LA 179

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
            +  L E+  S+N L   PE +     L   +   NR+ ++P  + G   L +  +G N+
Sbjct: 180 DYEDLEEINVSRNRLTSFPENLEKWGNLQIFEASNNRLEALPPRLGGLTQLWKVMLGQNS 239

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE-IGKMTT 299
           L  LP EL  +S + TLD+  N   +   E  +L  L++L LS+N +  +P   + ++T+
Sbjct: 240 LCNLPGELFDVS-IKTLDISKNNFTQVPDEMSKLTSLTILTLSDNQIKSIPSFLVDQLTS 298

Query: 300 LRKLLLTGNPL 310
           +R+L + GNP+
Sbjct: 299 IRRLAIEGNPI 309



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 150/336 (44%), Gaps = 64/336 (19%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LNV  NKLS+LP A+     LK+L+V                     +CS N L ELPS+
Sbjct: 5   LNVGKNKLSDLPVAV---FSLKNLEV--------------------LNCSENFLSELPSN 41

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADC-SKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           +     L++   ++N I +LPED+     ++ KL +  N++T L  +L      L EL  
Sbjct: 42  VACFAALTELDLNDNKIKTLPEDIGRFFPRLRKLLMYQNEITSLPASL-GDLQELEELNV 100

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P  +G+LS LI L++  N++ ++PS + G  +L      +N +  LP  L K
Sbjct: 101 FNNKLIKIPGCVGTLSSLIELNVASNKLKTLPS-LDGLTNLQRLAAFDNNIVLLPT-LEK 158

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           LSK+  L+L+ NQL      A    L  +++S N L+  P  + K   L+    + N L 
Sbjct: 159 LSKIKKLELYRNQLDSLPQLADYEDLEEINVSRNRLTSFPENLEKWGNLQIFEASNNRLE 218

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
            L   L       L +  +  L +N                               +L  
Sbjct: 219 ALPPRL-----GGLTQLWKVMLGQN-------------------------------SLCN 242

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +P E+++   I  LD+S+N+  ++P E+S   SL +
Sbjct: 243 LPGELFDVS-IKTLDISKNNFTQVPDEMSKLTSLTI 277



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 132/322 (40%), Gaps = 81/322 (25%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            +   N+L +LP ++    NL     S N ++ LP ++A  + +++LD+  NK+  L  +
Sbjct: 5   LNVGKNKLSDLPVAVFSLKNLEVLNCSENFLSELPSNVACFAALTELDLNDNKIKTLPED 64

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
           +   +  L +L+  +N +  +P ++G L  L  L++  N+++ IP  +    SL E  + 
Sbjct: 65  IGRFFPRLRKLLMYQNEITSLPASLGDLQELEELNVFNNKLIKIPGCVGTLSSLIELNVA 124

Query: 239 NNALSALPA---------------------ELGKLSKLGTLDLHSNQ------------L 265
           +N L  LP+                      L KLSK+  L+L+ NQ            L
Sbjct: 125 SNKLKTLPSLDGLTNLQRLAAFDNNIVLLPTLEKLSKIKKLELYRNQLDSLPQLADYEDL 184

Query: 266 KEYCVEACQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
           +E  V   +L            L + + SNN L  LPP +G +T L K++L  N L  L 
Sbjct: 185 EEINVSRNRLTSFPENLEKWGNLQIFEASNNRLEALPPRLGGLTQLWKVMLGQNSLCNLP 244

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             L +                                     V+ K L +   N + +P 
Sbjct: 245 GELFD-------------------------------------VSIKTLDISKNNFTQVPD 267

Query: 375 EIWEAGEITKLDLSRNSIQELP 396
           E+ +   +T L LS N I+ +P
Sbjct: 268 EMSKLTSLTILTLSDNQIKSIP 289


>gi|149066146|gb|EDM16019.1| similar to PDZ-domain protein scribble (predicted), isoform CRA_c
           [Rattus norvegicus]
          Length = 1638

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTEL-------------IASKNLLNGMPETI 203
                                    S   L EL             + S+NLL  +PE I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 323 HLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTH 379



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|456969346|gb|EMG10380.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 598

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 155/339 (45%), Gaps = 11/339 (3%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  LN+  N L+ LP  IG+L  L+ LD+  N +   P  I     L   D S N+L  L
Sbjct: 73  LQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIIL 132

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+ +GR  NL D     N +T+ P+++     + KL +  N+LT L    I     L  L
Sbjct: 133 PNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKE-IGQLKNLQTL 191

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N    +P+ IG L  L  L+L  N++ ++P  I    +L + Y+ NN L+  P E+
Sbjct: 192 DLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEI 251

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L  L    N+L     E  QL+ L  L+L NN L+  P EIG++  L+ L L  N
Sbjct: 252 GQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMN 311

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
           PL       +    P       S L   E +E    +   + +A    +   ELSLE  +
Sbjct: 312 PLSLKERKRIQKLFPD------SNLDLREVAENGVYRN--LNLAQEEPLKVFELSLEYKD 363

Query: 369 LS-AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            S + P  I +   +  L+L       LP E+S   +L+
Sbjct: 364 FSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLK 402



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 133/294 (45%), Gaps = 43/294 (14%)

Query: 17  SNRSLRDVP-NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIE----KLKEDLRNLPLLT 71
           SN  LR+V  N VY+N + A E     E + + +L L + +      K+    RNL    
Sbjct: 328 SNLDLREVAENGVYRNLNLAQE-----EPLKVFELSLEYKDFSQSFPKVILKFRNL---R 379

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            LN+     S LP  I  L  LK L +  N +  IP EIG    L   +  +N+L+ LP 
Sbjct: 380 GLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPK 439

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL       N +   P ++    K+ KLD+  N+ T                  
Sbjct: 440 EIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTT----------------- 482

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L  L+L +N++ ++ + I    +L E  + +N  + LP E+GK
Sbjct: 483 -------FPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGK 535

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           L KL TLDL +NQL     E  QL+ L  L L NN LS     + +   +RKLL
Sbjct: 536 LKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLS-----LKEQERIRKLL 584



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 164/390 (42%), Gaps = 42/390 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N    L +++  L  L  LN+S N+L+ LP  IG+L  L+ L +  N +  
Sbjct: 187 NLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTV 246

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P EIG    L       N+L  LP  +G+  NL      NN +T  P+++     +  L
Sbjct: 247 FPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDL 306

Query: 166 DVEGNKLT--------------------VLSNNLIASWTMLTEL--------IASKNLLN 197
           ++  N L+                    V  N +  +  +  E         +  K+   
Sbjct: 307 ELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQ 366

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
             P+ I     L  L+L+     ++P  IS   +L    +G N L  +P+E+G+L  L  
Sbjct: 367 SFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEA 426

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L+L +N+L+    E  QLR L  L L  N+L   P EI ++  L+KL L+ N   T    
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +        L   R++L  N  +E    +              +EL L     + +P EI
Sbjct: 487 IGKLENLQTLNLQRNQLT-NLTAEIGQLQ------------NLQELDLNDNQFTVLPKEI 533

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +  ++  LDL  N +  LP E+    +LQ
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQ 563



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 186/462 (40%), Gaps = 89/462 (19%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS   L  +P E+              +  +LQ+L L  N +  L +++  L  L  L
Sbjct: 53  LNLSGEKLTALPKEI-------------GQLKNLQELNLKWNLLTTLPKEIGQLENLQEL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L+  PA I EL  L+SLD+S N ++ +P+EIG    L       N+L   P  +
Sbjct: 100 DLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL---------------SNN 178
           G+  NL     S N +T+LP+++     +  LD++ N+ T+L               S+N
Sbjct: 160 GQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDN 219

Query: 179 LIASWTM-------LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
            +A+  +       L +L    N L   P+ IG L  L  L   +NR+ ++P  +    +
Sbjct: 220 QLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQN 279

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL-------------------------- 265
           L    + NN L+  P E+G+L  L  L+L  N L                          
Sbjct: 280 LQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENG 339

Query: 266 --------KEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
                   +E  ++  +L L   D S       P  I K   LR L L      TL   +
Sbjct: 340 VYRNLNLAQEEPLKVFELSLEYKDFS----QSFPKVILKFRNLRGLNLYDCGFSTLPKEI 395

Query: 318 VNGPTPALLKYLRSRLP--ENEDSEASTTK--EDLITMATRLSVTSKE---------LSL 364
                   LKYL   L   +N  SE    K  E L   A  L    KE         LSL
Sbjct: 396 SRLKN---LKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSL 452

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
               L   P+EI +  ++ KLDLS N     P E+    +LQ
Sbjct: 453 HQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 133/290 (45%), Gaps = 35/290 (12%)

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
           +L  +L   LN+     S   +T+LP+++     + +L+++ N LT L    I     L 
Sbjct: 39  DLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKE-IGQLENLQ 97

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           EL    N L   P  I  L +L  LDL +NR++ +P+ I    +L +  +  N L+  P 
Sbjct: 98  ELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK 157

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           E+G+L  L  L L  N+L     E  QL+ L  LDL +N  + LP EIG++  L+ L L+
Sbjct: 158 EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLS 217

Query: 307 GNPLRTLRSSLVNGPTPALLK-YLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL-SL 364
            N L TL   +  G    L K YLR+                      RL+V  KE+  L
Sbjct: 218 DNQLATLPVEI--GQLQNLQKLYLRN---------------------NRLTVFPKEIGQL 254

Query: 365 EGMN--------LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           + +         L+A+P E+ +   +  L+L  N +   P E+    +LQ
Sbjct: 255 QNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQ 304



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 106/252 (42%), Gaps = 27/252 (10%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
            P  I +   L+ L++       +P EI     L       N LK +PS +G+  NL   
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEAL 427

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
               N +  LP+++     + KL +  N L +     I     L +L  S N     P+ 
Sbjct: 428 NLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAE-IEQLKKLQKLDLSVNQFTTFPKE 486

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L  L+L +N++ ++ + I    +L E  + +N  + LP E+GKL KL TLDL  
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLR- 545

Query: 263 NQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
                                NN L+ LP EIG++  L+ L L  N L       +    
Sbjct: 546 ---------------------NNQLTTLPTEIGQLQNLQWLYLQNNQLSLKEQERIRKLL 584

Query: 323 P----ALLKYLR 330
           P     +LK++R
Sbjct: 585 PLKCKIILKFIR 596


>gi|300798331|ref|NP_001178808.1| protein scribble homolog [Rattus norvegicus]
 gi|149066145|gb|EDM16018.1| similar to PDZ-domain protein scribble (predicted), isoform CRA_b
           [Rattus norvegicus]
          Length = 1663

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTEL-------------IASKNLLNGMPETI 203
                                    S   L EL             + S+NLL  +PE I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 323 HLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTH 379



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|357148421|ref|XP_003574757.1| PREDICTED: protein lap1-like [Brachypodium distachyon]
          Length = 571

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 139/284 (48%), Gaps = 4/284 (1%)

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
            IE + + +  L  L  L++S N+L  LP AIG+L  L  LD+  N I  +P+ IG   +
Sbjct: 255 QIEWIPDSIGKLIGLVTLDISENRLVALPEAIGKLSSLTKLDLHANRIALLPESIGDLRS 314

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L+  D   NQL  LPSSLGR +NL +     N I +LP+ +   +++ KL VE N L  L
Sbjct: 315 LICLDLRGNQLTSLPSSLGRLMNLEELDMGANRIVTLPDSIGSLTRLKKLMVETNDLDEL 374

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
               I     L EL A  N L  +PE +G L  L  L +  N I S+P++++    L E 
Sbjct: 375 PYT-IGHCVSLVELQAGYNHLKALPEAVGKLESLEILSVRYNNIRSLPTTMASLTKLKEV 433

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSN--QLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
               N L ++P     ++ L  L++ +N   +++       L  L  LD+SNN +  LP 
Sbjct: 434 DASFNELESIPENFCFVTSLVKLNVGNNFADMQKLPRSIGNLEMLEELDISNNQIRVLPD 493

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
             G +  LR L    NPL+     +      A+++Y+     +N
Sbjct: 494 SFGNLHHLRVLRAEENPLQVPPREVALKGAQAVVQYMADHTTKN 537



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 115/222 (51%), Gaps = 3/222 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L KL L  N I  L E + +L  L  L++  N+L+ LP+++G L  L+ LD+  N I+ +
Sbjct: 292 LTKLDLHANRIALLPESIGDLRSLICLDLRGNQLTSLPSSLGRLMNLEELDMGANRIVTL 351

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IGS T L K    +N L ELP ++G C++L + +A  N + +LPE +     +  L 
Sbjct: 352 PDSIGSLTRLKKLMVETNDLDELPYTIGHCVSLVELQAGYNHLKALPEAVGKLESLEILS 411

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN--RILSIPS 224
           V  N +  L   + AS T L E+ AS N L  +PE    ++ L++L++  N   +  +P 
Sbjct: 412 VRYNNIRSLPTTM-ASLTKLKEVDASFNELESIPENFCFVTSLVKLNVGNNFADMQKLPR 470

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           SI     L E  + NN +  LP   G L  L  L    N L+
Sbjct: 471 SIGNLEMLEELDISNNQIRVLPDSFGNLHHLRVLRAEENPLQ 512



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 132/285 (46%), Gaps = 38/285 (13%)

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           Q++ +P S+G+ + L     S N + +LPE +   S ++KLD+  N++ +L         
Sbjct: 255 QIEWIPDSIGKLIGLVTLDISENRLVALPEAIGKLSSLTKLDLHANRIALL--------- 305

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
                          PE+IG L  LI LDL  N++ S+PSS+    +L E  MG N +  
Sbjct: 306 ---------------PESIGDLRSLICLDLRGNQLTSLPSSLGRLMNLEELDMGANRIVT 350

Query: 245 LPAELGKLSKLGTLDLHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LP  +G L++L  L + +N L E  Y +  C + L  L    N L  LP  +GK+ +L  
Sbjct: 351 LPDSIGSLTRLKKLMVETNDLDELPYTIGHC-VSLVELQAGYNHLKALPEAVGKLESLEI 409

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L +  N +R+L +++      A L  L+       + E+       +T   +L+V +   
Sbjct: 410 LSVRYNNIRSLPTTM------ASLTKLKEVDASFNELESIPENFCFVTSLVKLNVGNN-- 461

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
                ++  +P  I     + +LD+S N I+ LP    +   L+V
Sbjct: 462 ---FADMQKLPRSIGNLEMLEELDISNNQIRVLPDSFGNLHHLRV 503



 Score = 39.3 bits (90), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 4/77 (5%)

Query: 47  LQKLILAHN--NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           L KL + +N  +++KL   + NL +L  L++S+N++  LP + G LH L+ L    N + 
Sbjct: 453 LVKLNVGNNFADMQKLPRSIGNLEMLEELDISNNQIRVLPDSFGNLHHLRVLRAEENPLQ 512

Query: 105 KIPDEIG--SATALVKF 119
             P E+    A A+V++
Sbjct: 513 VPPREVALKGAQAVVQY 529


>gi|327403779|ref|YP_004344617.1| adenylate cyclase [Fluviicola taffensis DSM 16823]
 gi|327319287|gb|AEA43779.1| Adenylate cyclase [Fluviicola taffensis DSM 16823]
          Length = 575

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 166/377 (44%), Gaps = 31/377 (8%)

Query: 27  EVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA 86
           +VY N  +A E       +DL         +     D  +   L  LN+S+  L E P +
Sbjct: 179 KVYTNLKKAKESPSIVYHLDLSVQFTLPRPL-----DFSSFTELKTLNLSYCDLKEFPMS 233

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           I  L  L+ L +  N+ + +P EI   + L   D S N L  +P  +GR  +L +   + 
Sbjct: 234 IMTLTHLEYLHLGRNNFLSVPAEIAQLSHLKYLDFSENNLTTIPQEIGRLSDLKELNLAF 293

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL-IASKNLLNGMPETIGS 205
           N I  L E+L + SK++KL++  N    L N  I    +L EL I   + L  +PE+IG 
Sbjct: 294 NQIKELSENLGELSKLTKLNLTKNAFQQLPNA-IGQLKLLEELHIGFNDFLTKIPESIGD 352

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           LS L RL + ++ ++S+P SI     L    M NN +  LP   G L  L  L +H N+L
Sbjct: 353 LSHLRRLTVPKSGLISLPESIGKLNQLELLSMFNNRIRVLPESFGDLESLKYLRIHKNKL 412

Query: 266 KEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
            +       LR L  LDLS N L+ LP  I  M  L  L+L  N L TL  S+  G    
Sbjct: 413 TQLPDSFGNLRLLKELDLSENRLTTLPASIEYMENLTILVLDNNELTTLPFSI--GQLEC 470

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS-----AIPSEIWEA 379
           L                ++    + T+ T  S   K  +LE +NLS      +P  I   
Sbjct: 471 L----------------TSLSAYINTIKTLPSSLGKLKNLENLNLSYNNIQKLPRSIRHL 514

Query: 380 GEITKLDLSRNSIQELP 396
             +  LD+S N     P
Sbjct: 515 SSLFVLDISDNKFSRFP 531



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 185/428 (43%), Gaps = 51/428 (11%)

Query: 25  PNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP 84
           P++++ + +EA          D+ KL L   +I+     + ++  L  L++S N +  +P
Sbjct: 29  PDKIFFDLEEAARN-----PSDVYKLFLNSQSIKNFPISILSMKNLEELHLSSNLIPVIP 83

Query: 85  AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKA 144
             I +L  LK LD+  NS+  +P    +   L      +N+ KELP  L     L   K 
Sbjct: 84  EEIDKLENLKFLDLKGNSLDNLPASFRNLNKLEHLSIETNKFKELPDELSLLKKLRILKI 143

Query: 145 SNNCITSLPEDLADCSKMSKLDVEG-------NKLTVLSN--------------NLIASW 183
             N I SLPE     + +S L ++         K  V +N              +L   +
Sbjct: 144 RENQIHSLPEFREGFTALSMLYIDDINLSSDWQKYKVYTNLKKAKESPSIVYHLDLSVQF 203

Query: 184 TM--------LTELIASKNL----LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           T+         TEL  + NL    L   P +I +L+ L  L L +N  LS+P+ I+    
Sbjct: 204 TLPRPLDFSSFTEL-KTLNLSYCDLKEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQLSH 262

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L       N L+ +P E+G+LS L  L+L  NQ+KE      +L +L+ L+L+ N+   L
Sbjct: 263 LKYLDFSENNLTTIPQEIGRLSDLKELNLAFNQIKELSENLGELSKLTKLNLTKNAFQQL 322

Query: 291 PPEIGKMTTLRKLLLTGNPLRT-LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLI 349
           P  IG++  L +L +  N   T +  S+ +      L   +S L    +S     + +L+
Sbjct: 323 PNAIGQLKLLEELHIGFNDFLTKIPESIGDLSHLRRLTVPKSGLISLPESIGKLNQLELL 382

Query: 350 TMA-TRLSV---------TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           +M   R+ V         + K L +    L+ +P        + +LDLS N +  LP  +
Sbjct: 383 SMFNNRIRVLPESFGDLESLKYLRIHKNKLTQLPDSFGNLRLLKELDLSENRLTTLPASI 442

Query: 400 SSCASLQV 407
               +L +
Sbjct: 443 EYMENLTI 450


>gi|148697569|gb|EDL29516.1| scribbled homolog (Drosophila), isoform CRA_c [Mus musculus]
          Length = 1669

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 80  SLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 139

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 140 QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 199

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 200 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 259

Query: 182 -------------------------SWTMLTEL-------------IASKNLLNGMPETI 203
                                    S   L EL             + S+NLL  +PE I
Sbjct: 260 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGI 319

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 320 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRN 379

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 380 HLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTH 436



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 103 NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 162

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 163 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 219

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 220 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 279

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 280 VCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL-------------- 325

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 326 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPH 363

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 364 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 396



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 231 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 290

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 291 ELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 349

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 350 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 386

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 387 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 446

Query: 285 N 285
           N
Sbjct: 447 N 447


>gi|429962035|gb|ELA41579.1| hypothetical protein VICG_01443 [Vittaforma corneae ATCC 50505]
          Length = 462

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 174/385 (45%), Gaps = 40/385 (10%)

Query: 54  HNNIEKLK---------EDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLD 97
           H+ IE+LK         ++LR+LP        L  L ++ N+   L   IGEL  LK LD
Sbjct: 72  HDVIEELKYLCCLDLSRKELRSLPPEIGELESLDGLYLNGNEFETLSPVIGELKNLKYLD 131

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           +  N + ++  EIG    L + D S N+L+ LPS +G  +NL     ++N +  LP ++ 
Sbjct: 132 LYDNKLERLSPEIGRLKNLRELDLSGNKLRTLPSEIGELVNLGILHLNDNKLERLPPEIG 191

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
               + +L + GN L  L   +      L  L  + N L  +P  IG L  L  L L+ N
Sbjct: 192 RLKDLWRLYLNGNNLEALPETIENLKDRLWYLYLNGNKLKTLPPEIGELVNLGILHLNDN 251

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++  +P  I    +L E  +  N L ALP  + +L KL  L L+ N+LK    E  +L+ 
Sbjct: 252 KLERLPPEIGRLKNLRELGLNGNNLEALPETIRELKKLQYLYLNGNKLKTLPPEIGELKW 311

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L VL L+ N L  LPPEIG++  L  L L  N   TL S +        LK LR      
Sbjct: 312 LLVLHLNGNKLERLPPEIGELEGLYTLYLNDNEFETLPSEI------GKLKNLRH----- 360

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWE--AGEITKLDLSRNSIQE 394
                S  K + +          +EL L G  L  +PS I    +G +  LDL  N+I E
Sbjct: 361 --LHLSGNKLERLPYVIAELKNLRELDLSGNKLETLPSYIVRMLSGSLQLLDLRGNNIYE 418

Query: 395 L--------PPELSSCASLQVKFSD 411
           +          EL      +VKF +
Sbjct: 419 VGDGKRTLGKKELREIFGDRVKFDE 443



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 146/353 (41%), Gaps = 62/353 (17%)

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
           NI  L + +  L  L  L++S  +L  LP  IGEL  L  L ++ N    +   IG    
Sbjct: 67  NITSLHDVIEELKYLCCLDLSRKELRSLPPEIGELESLDGLYLNGNEFETLSPVIGELKN 126

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L   D   N+L+ L   +GR  NL +   S N + +LP ++ +   +  L +  NKL  L
Sbjct: 127 LKYLDLYDNKLERLSPEIGRLKNLRELDLSGNKLRTLPSEIGELVNLGILHLNDNKLERL 186

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS-LAE 234
                                   P  IG L  L RL L+ N + ++P +I      L  
Sbjct: 187 ------------------------PPEIGRLKDLWRLYLNGNNLEALPETIENLKDRLWY 222

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPE 293
            Y+  N L  LP E+G+L  LG L L+ N+L+    E  +L+ L  L L+ N+L  LP  
Sbjct: 223 LYLNGNKLKTLPPEIGELVNLGILHLNDNKLERLPPEIGRLKNLRELGLNGNNLEALPET 282

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           I ++  L+ L L GN L+TL       P    LK+L                        
Sbjct: 283 IRELKKLQYLYLNGNKLKTLP------PEIGELKWLLV---------------------- 314

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
                   L L G  L  +P EI E   +  L L+ N  + LP E+    +L+
Sbjct: 315 --------LHLNGNKLERLPPEIGELEGLYTLYLNDNEFETLPSEIGKLKNLR 359



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 125/308 (40%), Gaps = 62/308 (20%)

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           +I  + D I     L   D S  +L+ LP  +G   +L     + N   +L   + +   
Sbjct: 67  NITSLHDVIEELKYLCCLDLSRKELRSLPPEIGELESLDGLYLNGNEFETLSPVIGELKN 126

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  LD+  NKL  LS                       PE IG L  L  LDL  N++ +
Sbjct: 127 LKYLDLYDNKLERLS-----------------------PE-IGRLKNLRELDLSGNKLRT 162

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSV 279
           +PS I    +L   ++ +N L  LP E+G+L  L  L L+ N L+     +E  + RL  
Sbjct: 163 LPSEIGELVNLGILHLNDNKLERLPPEIGRLKDLWRLYLNGNNLEALPETIENLKDRLWY 222

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L L+ N L  LPPEIG++  L  L L  N L  L       P    LK LR         
Sbjct: 223 LYLNGNKLKTLPPEIGELVNLGILHLNDNKLERLP------PEIGRLKNLR--------- 267

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
                                EL L G NL A+P  I E  ++  L L+ N ++ LPPE+
Sbjct: 268 ---------------------ELGLNGNNLEALPETIRELKKLQYLYLNGNKLKTLPPEI 306

Query: 400 SSCASLQV 407
                L V
Sbjct: 307 GELKWLLV 314



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 74/135 (54%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L L  NN+E L E +R L  L  L ++ NKL  LP  IGEL  L  L ++ N + +
Sbjct: 265 NLRELGLNGNNLEALPETIRELKKLQYLYLNGNKLKTLPPEIGELKWLLVLHLNGNKLER 324

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L     + N+ + LPS +G+  NL     S N +  LP  +A+   + +L
Sbjct: 325 LPPEIGELEGLYTLYLNDNEFETLPSEIGKLKNLRHLHLSGNKLERLPYVIAELKNLREL 384

Query: 166 DVEGNKLTVLSNNLI 180
           D+ GNKL  L + ++
Sbjct: 385 DLSGNKLETLPSYIV 399



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 85/182 (46%), Gaps = 3/182 (1%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E V+L  L L  N +E+L  ++  L  L  L ++ N L  LP  I EL  L+ L ++ N 
Sbjct: 239 ELVNLGILHLNDNKLERLPPEIGRLKNLRELGLNGNNLEALPETIRELKKLQYLYLNGNK 298

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG    L+    + N+L+ LP  +G    L     ++N   +LP ++     +
Sbjct: 299 LKTLPPEIGELKWLLVLHLNGNKLERLPPEIGELEGLYTLYLNDNEFETLPSEIGKLKNL 358

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL--SRLIRLDLHQNRIL 220
             L + GNKL  L   +IA    L EL  S N L  +P  I  +    L  LDL  N I 
Sbjct: 359 RHLHLSGNKLERLP-YVIAELKNLRELDLSGNKLETLPSYIVRMLSGSLQLLDLRGNNIY 417

Query: 221 SI 222
            +
Sbjct: 418 EV 419


>gi|126310265|ref|XP_001371328.1| PREDICTED: leucine-rich repeat-containing protein 1 [Monodelphis
           domestica]
          Length = 525

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 133/241 (55%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L E L  L  L  L++ +N++  LP  IG L  L+ L +  N + +
Sbjct: 153 NLASLELRENLLTYLPESLTQLQRLKELDLGNNEIYNLPETIGALIHLEDLWLDGNQLAE 212

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N +  LP+ +    K+S L
Sbjct: 213 LPQEIGNLKNLLCLDVSENKLERLPDEISGLASLTDLVISQNLLEVLPDGIGKLRKLSIL 272

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
             + N+L  L+   +     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 273 KADQNRLVQLTE-AVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 331

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N LS +P+E+ + ++L  LD+  N+L    +    L+L  L LS+N
Sbjct: 332 IGGCCSLTVFSVRDNRLSRIPSEVSQATELHVLDVAGNRLLHLPLSLTNLKLKALWLSDN 391

Query: 286 S 286
            
Sbjct: 392 Q 392



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 138/269 (51%), Gaps = 4/269 (1%)

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
           +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +P+ +     L +
Sbjct: 120 RLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPESLTQLQRLKE 179

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D  +N++  LP ++G  ++L D     N +  LP+++ +   +  LDV  NKL  L + 
Sbjct: 180 LDLGNNEIYNLPETIGALIHLEDLWLDGNQLAELPQEIGNLKNLLCLDVSENKLERLPDE 239

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I+    LT+L+ S+NLL  +P+ IG L +L  L   QNR++ +  ++  C SL E  + 
Sbjct: 240 -ISGLASLTDLVISQNLLEVLPDGIGKLRKLSILKADQNRLVQLTEAVGECESLTELVLT 298

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGK 296
            N L  LP  +GKL KL  L+   N+L     E   C   L+V  + +N LS +P E+ +
Sbjct: 299 ENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGC-CSLTVFSVRDNRLSRIPSEVSQ 357

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
            T L  L + GN L  L  SL N    AL
Sbjct: 358 ATELHVLDVAGNRLLHLPLSLTNLKLKAL 386



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 182/394 (46%), Gaps = 48/394 (12%)

Query: 20  SLRDVPNEVYKNFDEAGE-----------GDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL  VP E+Y+      E            +++++ V L+KL L+ N I++L  ++ N  
Sbjct: 23  SLVYVPEEIYRYTRSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFM 82

Query: 69  LLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK 127
            L  L+VS N++ +E+P        +K  D++     ++P+       L     +   L+
Sbjct: 83  QLVELDVSRNEIPNEVPERKTFCKSIKVSDLTEFFSFRLPESFPELQNLTCLSVNDISLQ 142

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
            LP ++G   NL+  +   N +T LPE L    ++ +LD+  N++  L    I +   L 
Sbjct: 143 SLPENIGNLYNLASLELRENLLTYLPESLTQLQRLKELDLGNNEIYNLPET-IGALIHLE 201

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           +L    N L  +P+ IG+L  L+ LD+ +N++  +P  ISG  SL +  +  N L  LP 
Sbjct: 202 DLWLDGNQLAELPQEIGNLKNLLCLDVSENKLERLPDEISGLASLTDLVISQNLLEVLPD 261

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
            +GKL KL                      S+L    N L  L   +G+  +L +L+LT 
Sbjct: 262 GIGKLRKL----------------------SILKADQNRLVQLTEAVGECESLTELVLTE 299

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L TL  S+        LK L S L  + +   S  KE  I     L+V     S+   
Sbjct: 300 NQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV----FSVRDN 346

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
            LS IPSE+ +A E+  LD++ N +  LP  L++
Sbjct: 347 RLSRIPSEVSQATELHVLDVAGNRLLHLPLSLTN 380



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 146/331 (44%), Gaps = 37/331 (11%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL-KELPSSLGRC 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N++  E+P     C
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPNEVPERKTFC 105

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
            ++     +      LPE   +   ++ L V    L  L  N I +   L  L   +NLL
Sbjct: 106 KSIKVSDLTEFFSFRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENLL 164

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +PE++  L RL  LDL  N I ++P +I     L + ++  N L+ LP E+G L  L 
Sbjct: 165 TYLPESLTQLQRLKELDLGNNEIYNLPETIGALIHLEDLWLDGNQLAELPQEIGNLKNL- 223

Query: 257 TLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
                       C          LD+S N L  LP EI  + +L  L+++ N L  L   
Sbjct: 224 -----------LC----------LDVSENKLERLPDEISGLASLTDLVISQNLLEVLPDG 262

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
           +      ++LK  ++RL +             +T A     +  EL L    L  +P  I
Sbjct: 263 IGKLRKLSILKADQNRLVQ-------------LTEAVGECESLTELVLTENQLLTLPKSI 309

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +  +++ L+  RN +  LP E+  C SL V
Sbjct: 310 GKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 340



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 103/236 (43%), Gaps = 25/236 (10%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL-SA 244
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N + + 
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPNE 97

Query: 245 LPAELGKLSKLGTLDL---HSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           +P        +   DL    S +L E   E   L  + L +++ SL  LP  IG +  L 
Sbjct: 98  VPERKTFCKSIKVSDLTEFFSFRLPESFPELQNL--TCLSVNDISLQSLPENIGNLYNLA 155

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSK 360
            L L  N L  L  SL        L+ L+   L  NE      T   LI +        +
Sbjct: 156 SLELRENLLTYLPESLTQ------LQRLKELDLGNNEIYNLPETIGALIHL--------E 201

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +L L+G  L+ +P EI     +  LD+S N ++ LP E+S  ASL    +DLV ++
Sbjct: 202 DLWLDGNQLAELPQEIGNLKNLLCLDVSENKLERLPDEISGLASL----TDLVISQ 253


>gi|28972079|dbj|BAC65493.1| mKIAA0147 protein [Mus musculus]
          Length = 1694

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 80  SLQVVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 139

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 140 QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 199

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 200 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 259

Query: 182 -------------------------SWTMLTEL-------------IASKNLLNGMPETI 203
                                    S   L EL             + S+NLL  +PE I
Sbjct: 260 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGI 319

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 320 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRN 379

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 380 HLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTH 436



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 103 NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 162

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 163 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 219

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 220 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 279

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 280 VCLDVSENRLEELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQL-------------- 325

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 326 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPH 363

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 364 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 396



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 231 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 290

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 291 ELPVELGGLALLTDLLLSQNLLQRLPEGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 349

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 350 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 386

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 387 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 446

Query: 285 N 285
           N
Sbjct: 447 N 447


>gi|427722688|ref|YP_007069965.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
 gi|427354408|gb|AFY37131.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
          Length = 1183

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 190/410 (46%), Gaps = 48/410 (11%)

Query: 43  EAVDLQKLILAH---NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           E   LQKL       NN+E +   +   P L  LN+S N++ E+P ++  L  L+ LD+S
Sbjct: 64  ETTQLQKLKRLEWPCNNLEAIPVIITKFPKLKQLNLSFNQIKEIPESLSALINLQQLDLS 123

Query: 100 FN-SIMKIPDEIGSATALVKFDCSSN-QLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
            N  I +IPD + +   L + D S+N Q+KE+P SL   +NL   +   N I  +P  L 
Sbjct: 124 ANHQIKEIPDSLSALINLQQLDLSANHQIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLT 183

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
               + +L +    +  + ++L A+   L +L    N +  +P+++ +LS L RL L+ N
Sbjct: 184 TLVSLQQLHLNDTGIKEIPDSL-AALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFN 242

Query: 218 RILSIPSSISGCCSLAEFYM-----------------------GNNALSALPAELGKLSK 254
           RI  IP S++   SL +  +                       G+N +  +P   GKL+ 
Sbjct: 243 RIKKIPDSLAKLASLQQLDLNINQISEIPDSFATLKNLQKLDLGSNQIKKIPDSFGKLAS 302

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L SNQ+K+      +L  L  L+LS+N +  +P     +  L++L L  NP++ +
Sbjct: 303 LQQLNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLYLYNNPIKEV 362

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEAS------------TTKE--DLITMATRLSVTS 359
             SL        L +  +++ E  DS A+              KE  D +   T L    
Sbjct: 363 PDSLATLVNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKEIPDSLAALTHL---- 418

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           + L L    ++ IP  +     + +L+LS N I+++P      ASLQ  +
Sbjct: 419 QNLGLSSTQITEIPDFLSTLVNLQQLNLSFNQIKKIPDSFVKLASLQALY 468



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 146/279 (52%), Gaps = 2/279 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+LQ+L L +N I+++ + L  L  L  L ++ N++ ++P ++ +L  L+ LD++ N I 
Sbjct: 209 VNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQIS 268

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           +IPD   +   L K D  SNQ+K++P S G+  +L      +N I  +P+     + + +
Sbjct: 269 EIPDSFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQ 328

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  NK+  + ++  A+   L +L    N +  +P+++ +L  L +L    N+I  IP 
Sbjct: 329 LNLSHNKIEEIPDSF-ATLVNLQQLYLYNNPIKEVPDSLATLVNLQQLGFSSNQIKEIPD 387

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC-VEACQLRLSVLDLS 283
           S++   +L +  + +N +  +P  L  L+ L  L L S Q+ E     +  + L  L+LS
Sbjct: 388 SLATLVNLQQLDISSNQIKEIPDSLAALTHLQNLGLSSTQITEIPDFLSTLVNLQQLNLS 447

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
            N +  +P    K+ +L+ L L  N +  + S L N P 
Sbjct: 448 FNQIKKIPDSFVKLASLQALYLCSNQITKIPSFLENLPA 486



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 142/266 (53%), Gaps = 2/266 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ+L L  N I+K+ + L  L  L  L+++ N++SE+P +   L  L+ LD+  N I K
Sbjct: 233 NLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQISEIPDSFATLKNLQKLDLGSNQIKK 292

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IPD  G   +L + +  SNQ+K++P S G+  +L     S+N I  +P+  A    + +L
Sbjct: 293 IPDSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQL 352

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N +  + ++L A+   L +L  S N +  +P+++ +L  L +LD+  N+I  IP S
Sbjct: 353 YLYNNPIKEVPDSL-ATLVNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKEIPDS 411

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           ++    L    + +  ++ +P  L  L  L  L+L  NQ+K+      +L  L  L L +
Sbjct: 412 LAALTHLQNLGLSSTQITEIPDFLSTLVNLQQLNLSFNQIKKIPDSFVKLASLQALYLCS 471

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           N ++ +P  +  +  L+KL L  NP+
Sbjct: 472 NQITKIPSFLENLPALQKLDLRLNPI 497



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 170/369 (46%), Gaps = 39/369 (10%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
              N L  LP    +L  LK L+   N++  IP  I     L + + S NQ+KE+P SL 
Sbjct: 53  AQENNLKTLPPETTQLQKLKRLEWPCNNLEAIPVIITKFPKLKQLNLSFNQIKEIPESLS 112

Query: 135 RCLNLSDFK-ASNNCITSLPEDLADCSKMSKLDVEGN-----------------KLTVLS 176
             +NL     ++N+ I  +P+ L+    + +LD+  N                 +L +  
Sbjct: 113 ALINLQQLDLSANHQIKEIPDSLSALINLQQLDLSANHQIKEIPDSLAALVNLQQLQLGG 172

Query: 177 NNLIASWTMLTELIASKNL------LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           N +     +LT L++ + L      +  +P+++ +L  L +L L+ N+I  IP S++   
Sbjct: 173 NPIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQLYLYNNQIKEIPDSLAALS 232

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L    +  N +  +P  L KL+ L  LDL+ NQ+ E       L+ L  LDL +N +  
Sbjct: 233 NLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQISEIPDSFATLKNLQKLDLGSNQIKK 292

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT----- 344
           +P   GK+ +L++L L  N ++ +  S     +   L    +++ E  DS A+       
Sbjct: 293 IPDSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQL 352

Query: 345 -------KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
                  KE   ++AT +++  ++L      +  IP  +     + +LD+S N I+E+P 
Sbjct: 353 YLYNNPIKEVPDSLATLVNL--QQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKEIPD 410

Query: 398 ELSSCASLQ 406
            L++   LQ
Sbjct: 411 SLAALTHLQ 419



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 24/225 (10%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + +   LQ+L L  N I+K+ +    L  L  LN+SHNK+ E+P +   L  L+ L +
Sbjct: 295 DSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLYL 354

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N I ++PD + +   L +   SSNQ+KE+P SL   +NL     S+N I  +P+ LA 
Sbjct: 355 YNNPIKEVPDSLATLVNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKEIPDSLAA 414

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
            + +               NL  S T +TE+          P+ + +L  L +L+L  N+
Sbjct: 415 LTHLQ--------------NLGLSSTQITEI----------PDFLSTLVNLQQLNLSFNQ 450

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           I  IP S     SL   Y+ +N ++ +P+ L  L  L  LDL  N
Sbjct: 451 IKKIPDSFVKLASLQALYLCSNQITKIPSFLENLPALQKLDLRLN 495



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 13/162 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            L L N  +++VP             D     V+LQ+L  + N I+++ + L  L  L  
Sbjct: 351 QLYLYNNPIKEVP-------------DSLATLVNLQQLGFSSNQIKEIPDSLATLVNLQQ 397

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S N++ E+P ++  L  L++L +S   I +IPD + +   L + + S NQ+K++P S
Sbjct: 398 LDISSNQIKEIPDSLAALTHLQNLGLSSTQITEIPDFLSTLVNLQQLNLSFNQIKKIPDS 457

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
             +  +L      +N IT +P  L +   + KLD+  N + V
Sbjct: 458 FVKLASLQALYLCSNQITKIPSFLENLPALQKLDLRLNPIPV 499


>gi|355390313|ref|NP_874365.3| protein scribble homolog isoform a [Homo sapiens]
          Length = 1655

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+   T L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTH 379



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|348555824|ref|XP_003463723.1| PREDICTED: protein scribble homolog isoform 3 [Cavia porcellus]
          Length = 1601

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTEL-------------IASKNLLNGMPETI 203
                                    S   L EL             + S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQNLLQRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 323 HLEVLPPEIGGC-VALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPFALTH 379



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 SLEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPVELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPVELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|328786949|ref|XP_393738.4| PREDICTED: protein lap1-like [Apis mellifera]
          Length = 990

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 181/394 (45%), Gaps = 47/394 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L+N +L DVP +V+            +E   L+KL L  N I+ L   L     L VL
Sbjct: 22  LHLNNCNLYDVPPDVF-----------IYERT-LEKLYLDANRIKDLPRPLFQCHELRVL 69

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N+++ LP AI  L  L+ LD+S NSI ++PD I     L   D S N  +  P ++
Sbjct: 70  SLSDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAI 129

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
              + L +   ++  I  LP +    S +  L++  N L  L  ++ +    L  L    
Sbjct: 130 THIVGLRELYINDAYIEYLPANFGRLSALKTLELRENNLMTLPKSM-SRLINLQRLDIGN 188

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N    +PE +G L  L  L +  N I  IP +I+    L  F    NA+  +P+E+    
Sbjct: 189 NDFTELPEVVGDLINLTELWIDGNDIRRIPLNINQLYRLNHFDCTMNAIHIIPSEVEGWR 248

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +  + L SN++ +     C LR  V L + +N L+ LP +IG+M+ L +L++T N L  
Sbjct: 249 DISIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSNLEELIVTKNFLEY 308

Query: 313 LRSSLVNGPTPALLK----------YLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L SS+       LL+          YLR   PE             I   T LS+    L
Sbjct: 309 LPSSI------GLLRKLHCLNVDNNYLRCLPPE-------------IGSCTALSL----L 345

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           SL   NL+ +P E+     +  L+L  N I+ LP
Sbjct: 346 SLRSNNLTRVPPELGHLSSLKVLNLVNNCIKFLP 379



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 126/238 (52%), Gaps = 8/238 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  NN+  L + +  L  L  L++ +N  +ELP  +G+L  L  L +  N I +I
Sbjct: 158 LKTLELRENNLMTLPKSMSRLINLQRLDIGNNDFTELPEVVGDLINLTELWIDGNDIRRI 217

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  I     L  FDC+ N +  +PS +    ++S    S+N I  LP+ L     +  L 
Sbjct: 218 PLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLK 277

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L  L N+ I   + L ELI +KN L  +P +IG L +L  L++  N +  +P  I
Sbjct: 278 VDDNQLNALPND-IGQMSNLEELIVTKNFLEYLPSSIGLLRKLHCLNVDNNYLRCLPPEI 336

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
             C +L+   + +N L+ +P ELG LS L  L+L +N     C++   L +S+L+LSN
Sbjct: 337 GSCTALSLLSLRSNNLTRVPPELGHLSSLKVLNLVNN-----CIKF--LPVSMLNLSN 387



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 16/136 (11%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           RT  +L + +  L  +PN++              +  +L++LI+  N +E L   +  L 
Sbjct: 271 RTIVTLKVDDNQLNALPNDI-------------GQMSNLEELIVTKNFLEYLPSSIGLLR 317

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  LNV +N L  LP  IG    L  L +  N++ ++P E+G  ++L   +  +N +K 
Sbjct: 318 KLHCLNVDNNYLRCLPPEIGSCTALSLLSLRSNNLTRVPPELGHLSSLKVLNLVNNCIKF 377

Query: 129 LPSSLGRCLNLSDFKA 144
           LP S+   LNLS+ KA
Sbjct: 378 LPVSM---LNLSNLKA 390


>gi|18032008|gb|AAL38976.1| scribble [Homo sapiens]
          Length = 1630

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+   T L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTH 379



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|418666318|ref|ZP_13227747.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410757932|gb|EKR19533.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 313

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 122/245 (49%), Gaps = 2/245 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  LN+  N+L+ LP  IG+L  L+ L+++ N    +P EIG    L + D   NQ   L
Sbjct: 19  LEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSL 78

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P  +G+   L     + N  TSLP+++     + +LD+ GN+ T L    I     L  L
Sbjct: 79  PKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTFLPKE-IGQLQKLEAL 137

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N     P+ I     L  L L  +++ ++P  I    +L   ++  N L++LP E+
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLPKEI 197

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           G+L  L  L+L  N+LK    E  QL+ L  L L  N L+ LP EIG++  L +L L  N
Sbjct: 198 GQLQNLFELNLQDNKLKTLPKEIEQLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDN 257

Query: 309 PLRTL 313
            L+TL
Sbjct: 258 KLKTL 262



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 132/264 (50%), Gaps = 2/264 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL L  N +  L +++  L  L VLN++ N+ + LP  IG+L  L+ LD+  N    
Sbjct: 18  NLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTS 77

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L   + + NQ   LP  +G+  NL     + N  T LP+++    K+  L
Sbjct: 78  LPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTFLPKEIGQLQKLEAL 137

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +++ N+ T+     I     L  L  S + L  +P+ I  L  L  L L  N++ S+P  
Sbjct: 138 NLDHNRFTIFPKE-IRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLPKE 196

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L E  + +N L  LP E+ +L  L +L L  NQL     E  QL+ L  L+L +
Sbjct: 197 IGQLQNLFELNLQDNKLKTLPKEIEQLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQD 256

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGN 308
           N L  LP EI ++  L+ L L  N
Sbjct: 257 NKLKTLPKEIEQLQNLQVLRLYSN 280



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 136/311 (43%), Gaps = 38/311 (12%)

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           +  + +  +P  IG    L K +   NQL  LP  +G+  NL     + N  TSLP+++ 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
               + +LD++GN+ T L    I     L  L  + N    +P+ IG L  L RLDL  N
Sbjct: 61  QLQNLERLDLDGNQFTSLPKE-IGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGN 119

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           +   +P  I     L    + +N  +  P E+ +   L  L L  +QLK    E   L+ 
Sbjct: 120 QFTFLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQN 179

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L  L L  N L+ LP EIG++  L +L L  N L+TL   +        L+ L+S     
Sbjct: 180 LQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQ------LQNLQS----- 228

Query: 337 EDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                                    L L+G  L+++P EI +   + +L+L  N ++ LP
Sbjct: 229 -------------------------LHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLP 263

Query: 397 PELSSCASLQV 407
            E+    +LQV
Sbjct: 264 KEIEQLQNLQV 274



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 13/162 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL +      P E+ +      +  KW        L L+ + ++ L +++  L  L  
Sbjct: 136 ALNLDHNRFTIFPKEIRQQ-----QSLKW--------LRLSGDQLKTLPKEILLLQNLQS 182

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N+L+ LP  IG+L  L  L++  N +  +P EI     L       NQL  LP  
Sbjct: 183 LHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQSLHLDGNQLTSLPKE 242

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +G+  NL +    +N + +LP+++     +  L +  N  ++
Sbjct: 243 IGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSL 284


>gi|421118980|ref|ZP_15579307.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348320|gb|EKO99146.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 377

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 130/261 (49%), Gaps = 9/261 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +++L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 55  RQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 114

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D S+NQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 115 KNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+ I+    L 
Sbjct: 175 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQ 233

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L +LDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 234 YLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPK 293

Query: 293 EIGKMTTLRKLLLTGNPLRTL 313
           EI ++  L+ L L+ N L  L
Sbjct: 294 EIEQLKNLQTLFLSNNQLTIL 314



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 150/339 (44%), Gaps = 38/339 (11%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 50  VLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL     SNN +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLDL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 289 KTLPKEI----------------------------EQLKNLQT--------LFLSNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            +P EI +   +  L L  N +  LP E+    +LQ  +
Sbjct: 313 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLY 351



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 150/311 (48%), Gaps = 35/311 (11%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 51  LDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 110

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++S+N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 111 IEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSN 170

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N++T+L        
Sbjct: 171 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL-------- 222

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 223 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLT 266

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L LSNN L+ LP EIGK+  L  
Sbjct: 267 ILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLW 326

Query: 303 LLLTGNPLRTL 313
           L L  N L TL
Sbjct: 327 LSLVYNQLTTL 337



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 123/245 (50%), Gaps = 2/245 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L++N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 116 NLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 175

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN IT LP ++A   K+  L
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P  
Sbjct: 236 YLSDNQLITLPKE-IEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKE 294

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           I    +L   ++ NN L+ LP E+GKL  L  L L  NQL     E  QL+ L  L L+N
Sbjct: 295 IEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNN 354

Query: 285 NSLSG 289
           N  S 
Sbjct: 355 NQFSS 359



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 136/318 (42%), Gaps = 61/318 (19%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S   +  +P EIG    L +     NQL  LP  + +  NL      +N +T+L
Sbjct: 48  VRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+LTVL                        P+ I  L  L  L
Sbjct: 108 PKEIEQLKNLQVLDLSNNQLTVL------------------------PQEIEQLKNLQLL 143

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            LH NR+ ++   I    +L    + NN L+ LP E+ +L  L +L L  NQ   +  E 
Sbjct: 144 YLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 203

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L VL L+NN ++ LP EI K+  L+ L L+ N L TL         P  ++ L++
Sbjct: 204 GQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITL---------PKEIEQLKN 254

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                       K L L    L+ +P E+ +   +  LDL  N 
Sbjct: 255 ---------------------------LKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQ 287

Query: 392 IQELPPELSSCASLQVKF 409
           ++ LP E+    +LQ  F
Sbjct: 288 LKTLPKEIEQLKNLQTLF 305



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  LKSLD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339


>gi|198451552|ref|XP_002137316.1| GA26616, isoform A [Drosophila pseudoobscura pseudoobscura]
 gi|198131539|gb|EDY67874.1| GA26616, isoform A [Drosophila pseudoobscura pseudoobscura]
          Length = 655

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 200/456 (43%), Gaps = 82/456 (17%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAG--------------EGDKWWEAVDLQKLI 51
           K AR SG+LNLSN+ L  VP  +Y + +EA               + D WW  V L  L 
Sbjct: 74  KLARKSGTLNLSNKGLASVPERLY-DINEADAESKAATLEQLSIKDEDAWWNQVPLTNLD 132

Query: 52  LAHNNIEKLKEDLRNLPLLTVL-----------------------NVSHNKLSELPAAIG 88
           L+ N +  +   + NL  LTVL                       NVS NKLS+LP  + 
Sbjct: 133 LSSNALSHISPKIENLQSLTVLILHDNALVALPAEIGKLEKLMRLNVSRNKLSDLPRELY 192

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
            L  L+ L++S+N   ++  +I     L   D   N +K LP  +G  + L+      N 
Sbjct: 193 SLPELRHLNISYNEFSELNPDISDLHMLEFLDAGHNSIKSLPGGIGFLVRLTALLLPYNH 252

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           I  LP DL +   + +LD+  N LT L                        PE +G L +
Sbjct: 253 IKDLPPDLVNMRSLQRLDLMQNDLTCL------------------------PEDMGLLRK 288

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK-LSKLGTLDLHSNQLKE 267
           L  L +  N I+ + S   G  +L E +  NN +S +P  + + L  L  LDL  N++ +
Sbjct: 289 LQFLYIQHNDIMEL-SDFEGNETLTELHASNNYISNIPISMCENLPHLKVLDLRDNKITQ 347

Query: 268 YCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
              E      L+ LD+SNNS+  LP  +  +  L  L + GNP++++R  ++   T  +L
Sbjct: 348 LPDELCLLRNLNRLDVSNNSIDTLPVSLSALAHLISLQVEGNPIKSIRRDILQCGTSRIL 407

Query: 327 KYLRSR-LPENEDSEASTT------------KEDLITMATRLSVT-SKELSLEGMNLSAI 372
           + L+ R + +++D   S +             +       R  +  ++ L++    ++ +
Sbjct: 408 RTLQERSMVKSKDEVESDSGAGARLCGGQAGNDTAANYPDRYKLRHTRTLAVNLEEITDV 467

Query: 373 PSEIWEAGE---ITKLDLSRNSIQELPPELSSCASL 405
           P E+++  +   +  +D +RN ++ +P  L    ++
Sbjct: 468 PEEVFQLAQKEGVHVVDFARNQLRTVPDGLQHMQNI 503



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 138/324 (42%), Gaps = 55/324 (16%)

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
           NLP L VL++  NK+++LP  +  L  L  LDVS NSI  +P  + +   L+      N 
Sbjct: 331 NLPHLKVLDLRDNKITQLPDELCLLRNLNRLDVSNNSIDTLPVSLSALAHLISLQVEGNP 390

Query: 126 LK----------------------------ELPSSLGRCLNLSDFKASNNC--------- 148
           +K                            E+ S  G    L   +A N+          
Sbjct: 391 IKSIRRDILQCGTSRILRTLQERSMVKSKDEVESDSGAGARLCGGQAGNDTAANYPDRYK 450

Query: 149 -------------ITSLPED---LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
                        IT +PE+   LA    +  +D   N+L  + + L     ++TEL+ +
Sbjct: 451 LRHTRTLAVNLEEITDVPEEVFQLAQKEGVHVVDFARNQLRTVPDGLQHMQNIVTELVLA 510

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N +  +P+ I   +R+  L+L  N +  +P       +L E  + NN  S LP+ L  L
Sbjct: 511 HNRIGQVPQFISQFTRITLLNLSNNLLTDLPKEFGVLNTLRELNIANNRFSFLPSGLYDL 570

Query: 253 SKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             L  L    N + E  V   Q   RLS LDL NN +  +PP +G +T +  L L GNP 
Sbjct: 571 QGLEILIASDNHINELNVAGLQRMPRLSTLDLRNNDIDFIPPILGTLTNITHLELVGNPF 630

Query: 311 RTLRSSLVNGPTPALLKYLRSRLP 334
           R  R  ++   T +++ YLR R+P
Sbjct: 631 RQPRHQILMKGTESIMSYLRDRVP 654



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 134/307 (43%), Gaps = 47/307 (15%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTV--LSNNLIASW---TMLTELIASKNLLNGM 199
           SN  + S+PE L D   +++ D E    T+  LS     +W     LT L  S N L+ +
Sbjct: 85  SNKGLASVPERLYD---INEADAESKAATLEQLSIKDEDAWWNQVPLTNLDLSSNALSHI 141

Query: 200 PETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
              I +L  L  L LH N ++++P+ I     L    +  N LS LP EL  L +L  L+
Sbjct: 142 SPKIENLQSLTVLILHDNALVALPAEIGKLEKLMRLNVSRNKLSDLPRELYSLPELRHLN 201

Query: 260 LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           +  N+  E   +   L  L  LD  +NS+  LP  IG +  L  LLL  N ++ L   LV
Sbjct: 202 ISYNEFSELNPDISDLHMLEFLDAGHNSIKSLPGGIGFLVRLTALLLPYNHIKDLPPDLV 261

Query: 319 NGPTPALLKYLRSRL---PEN--------------------EDSEASTTKEDL------- 348
           N  +   L  +++ L   PE+                     D E + T  +L       
Sbjct: 262 NMRSLQRLDLMQNDLTCLPEDMGLLRKLQFLYIQHNDIMELSDFEGNETLTELHASNNYI 321

Query: 349 ----ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA- 403
               I+M   L    K L L    ++ +P E+     + +LD+S NSI  LP  LS+ A 
Sbjct: 322 SNIPISMCENLPHL-KVLDLRDNKITQLPDELCLLRNLNRLDVSNNSIDTLPVSLSALAH 380

Query: 404 --SLQVK 408
             SLQV+
Sbjct: 381 LISLQVE 387


>gi|119602603|gb|EAW82197.1| scribbled homolog (Drosophila), isoform CRA_b [Homo sapiens]
          Length = 1656

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+   T L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTH 379



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|119602604|gb|EAW82198.1| scribbled homolog (Drosophila), isoform CRA_c [Homo sapiens]
          Length = 1631

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+   T L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTH 379



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|350417075|ref|XP_003491244.1| PREDICTED: protein lap4-like isoform 2 [Bombus impatiens]
          Length = 1759

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 166/365 (45%), Gaps = 61/365 (16%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D IL+ +R+   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  DDILRYSRSLEELLLDANHIRDLP----KNF---------FRLQKLRKLGLSDNEIHRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP-------------- 107
            D++N   L  L+VS N + ++P  I  L  L+  D S N I ++P              
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGL 136

Query: 108 ---------DEIGSATALVKFDCSSNQLKELPSSL-----------------------GR 135
                     + GS  AL   +   N LK LP SL                       G+
Sbjct: 137 NDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGK 196

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
              L +    +N +  LP ++ +   ++ LDV  N+L  L    I     LT+L  S+N+
Sbjct: 197 LPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEE-IGGLESLTDLHLSQNV 255

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           +  +P+ +G L +L  L + QNR+ ++ S+I  C +L E  +  N L  LP  +GKL  L
Sbjct: 256 IEKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNL 315

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L++  N L+    E   L+ L VL L +N L  LP E+G+ T L  L ++GN L+ L 
Sbjct: 316 NNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLP 375

Query: 315 SSLVN 319
            SL+N
Sbjct: 376 YSLIN 380



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 126/239 (52%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L E L  L  L  L++  N +  LPA IG+L  L+ L +  N +  +
Sbjct: 154 LQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L   D S N+L++LP  +G   +L+D   S N I  LP+ L +  K++ L 
Sbjct: 214 PPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L+ L++N I     L ELI ++N L  +P TIG L  L  L++ +N + S+P+ I
Sbjct: 274 VDQNRLSTLNSN-IGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
                L    + +N L  LP E+G+ + L  LD+  N+L+        L L  + LS N
Sbjct: 333 GNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAVWLSKN 391



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 112/262 (42%), Gaps = 38/262 (14%)

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N I  LP++     K+ KL +  N++  L  + I ++  L EL  S+N +  +PE I +L
Sbjct: 47  NHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPD-IQNFENLVELDVSRNDIPDIPENIKNL 105

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L   D   N I  +P+      +L    + + +L+ LP + G L  L +L+L  N LK
Sbjct: 106 RALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLK 165

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
                  QL +L  LDL +N +  LP  IGK+  L++L L  N L+ L   +    T A 
Sbjct: 166 SLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGELKTLAC 225

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           L    +RL            EDL                        P EI     +T L
Sbjct: 226 LDVSENRL------------EDL------------------------PEEIGGLESLTDL 249

Query: 386 DLSRNSIQELPPELSSCASLQV 407
            LS+N I++LP  L     L +
Sbjct: 250 HLSQNVIEKLPDGLGELQKLTI 271


>gi|32812252|gb|AAP88017.1|AF240677_1 CRIB1 [Homo sapiens]
 gi|20521832|dbj|BAA09768.3| KIAA0147 protein [Homo sapiens]
 gi|168274406|dbj|BAG09623.1| scribble protein [synthetic construct]
          Length = 1630

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+   T L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTH 379



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|429962971|gb|ELA42515.1| hypothetical protein VICG_00614 [Vittaforma corneae ATCC 50505]
          Length = 835

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 136/274 (49%), Gaps = 2/274 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+KL L  NN++ L  ++  L  L  L++ +NKL  LP  I EL  L+ LD+  N + 
Sbjct: 67  VNLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLESLPPEIEELKNLQHLDLGDNKLK 126

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+     L   D   NQ +  P+ + +  NL     +NN     P ++A+  K+  
Sbjct: 127 ALPYEVEELKNLQHLDLGYNQFESFPTVIRKLKNLERLILNNNKFGLFPIEIAELKKLQI 186

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L + GNKL +L +  I     L EL    N L   P  I  L +L  LDL  N   S P+
Sbjct: 187 LYLRGNKLKLLPDE-IGEMKELRELGLDDNELESFPTVIAELRKLQTLDLGYNEFESFPT 245

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   ++ +N L  LP E+G+L  L  L+L  N+L+       +L  L VL+L 
Sbjct: 246 VIVKLKNLQYLFLNDNKLKLLPDEIGELENLRELNLRGNKLETLPPVIGELENLYVLELY 305

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            N+L  LP  IGK+  L  L L  N + TL +++
Sbjct: 306 KNNLESLPDVIGKLKNLGMLNLGNNKIETLPAAI 339



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 130/287 (45%), Gaps = 13/287 (4%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           L+L N  L  +P E+   KN      GD   +A+        +LQ L L +N  E     
Sbjct: 95  LDLRNNKLESLPPEIEELKNLQHLDLGDNKLKALPYEVEELKNLQHLDLGYNQFESFPTV 154

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +R L  L  L +++NK    P  I EL  L+ L +  N +  +PDEIG    L +     
Sbjct: 155 IRKLKNLERLILNNNKFGLFPIEIAELKKLQILYLRGNKLKLLPDEIGEMKELRELGLDD 214

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N+L+  P+ +     L       N   S P  +     +  L +  NKL +L +  I   
Sbjct: 215 NELESFPTVIAELRKLQTLDLGYNEFESFPTVIVKLKNLQYLFLNDNKLKLLPDE-IGEL 273

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
             L EL    N L  +P  IG L  L  L+L++N + S+P  I    +L    +GNN + 
Sbjct: 274 ENLRELNLRGNKLETLPPVIGELENLYVLELYKNNLESLPDVIGKLKNLGMLNLGNNKIE 333

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLS 288
            LPA +G+L  L  L L  N+L+   VE  +L   L +L+L  N++S
Sbjct: 334 TLPAAIGELQNLRELYLSDNKLETLPVEIEKLSGSLRLLNLMGNNMS 380



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 121/305 (39%), Gaps = 38/305 (12%)

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            I  I  +IG    L K D   N LK LP  +G   NL      NN + SLP ++ +   
Sbjct: 55  GIRFIGSDIGRLVNLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLESLPPEIEELKN 114

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  LD+  NKL  L    +     L  L    N     P  I  L  L RL L+ N+   
Sbjct: 115 LQHLDLGDNKLKALPYE-VEELKNLQHLDLGYNQFESFPTVIRKLKNLERLILNNNKFGL 173

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
            P  I+    L   Y+  N L  LP E+G++ +L  L L  N+L+ +     +LR L  L
Sbjct: 174 FPIEIAELKKLQILYLRGNKLKLLPDEIGEMKELRELGLDDNELESFPTVIAELRKLQTL 233

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
           DL  N     P  I K+  L+ L L  N L+ L   +        L+ LR          
Sbjct: 234 DLGYNEFESFPTVIVKLKNLQYLFLNDNKLKLLPDEI------GELENLR---------- 277

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                               EL+L G  L  +P  I E   +  L+L +N+++ LP  + 
Sbjct: 278 --------------------ELNLRGNKLETLPPVIGELENLYVLELYKNNLESLPDVIG 317

Query: 401 SCASL 405
              +L
Sbjct: 318 KLKNL 322



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 25/222 (11%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L +++  +  L  L +  N+L   P  I EL  L++LD+ +N     
Sbjct: 184 LQILYLRGNKLKLLPDEIGEMKELRELGLDDNELESFPTVIAELRKLQTLDLGYNEFESF 243

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  I     L     + N+LK LP  +G   NL +     N + +LP  + +   +  L+
Sbjct: 244 PTVIVKLKNLQYLFLNDNKLKLLPDEIGELENLRELNLRGNKLETLPPVIGELENLYVLE 303

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +                         KN L  +P+ IG L  L  L+L  N+I ++P++I
Sbjct: 304 L------------------------YKNNLESLPDVIGKLKNLGMLNLGNNKIETLPAAI 339

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKE 267
               +L E Y+ +N L  LP E+ KLS  L  L+L  N + E
Sbjct: 340 GELQNLRELYLSDNKLETLPVEIEKLSGSLRLLNLMGNNMSE 381



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 121/287 (42%), Gaps = 46/287 (16%)

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
           ++ + S +GR +NL       N + +LP ++ +   +  LD+  NKL  L          
Sbjct: 56  IRFIGSDIGRLVNLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLESL---------- 105

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
                         P  I  L  L  LDL  N++ ++P  +    +L    +G N   + 
Sbjct: 106 --------------PPEIEELKNLQHLDLGDNKLKALPYEVEELKNLQHLDLGYNQFESF 151

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  + KL  L  L L++N+   + +E  +L+ L +L L  N L  LP EIG+M  LR+L 
Sbjct: 152 PTVIRKLKNLERLILNNNKFGLFPIEIAELKKLQILYLRGNKLKLLPDEIGEMKELRELG 211

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSVTSK 360
           L  N L +          P ++  LR      L  NE        E   T+  +L    +
Sbjct: 212 LDDNELESF---------PTVIAELRKLQTLDLGYNE-------FESFPTVIVKLK-NLQ 254

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            L L    L  +P EI E   + +L+L  N ++ LPP +    +L V
Sbjct: 255 YLFLNDNKLKLLPDEIGELENLRELNLRGNKLETLPPVIGELENLYV 301



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 95/231 (41%), Gaps = 37/231 (16%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L +L    N L  +P  IG L  L  LDL  N++ S+P  I    +L    +G+
Sbjct: 63  IGRLVNLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLESLPPEIEELKNLQHLDLGD 122

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N L ALP E+ +L  L  LDL  NQ + +     +L+ L  L L+NN     P EI ++ 
Sbjct: 123 NKLKALPYEVEELKNLQHLDLGYNQFESFPTVIRKLKNLERLILNNNKFGLFPIEIAELK 182

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L+ L L GN L+ L   +        +K LR                            
Sbjct: 183 KLQILYLRGNKLKLLPDEI------GEMKELR---------------------------- 208

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
             EL L+   L + P+ I E  ++  LDL  N  +  P  +    +LQ  F
Sbjct: 209 --ELGLDDNELESFPTVIAELRKLQTLDLGYNEFESFPTVIVKLKNLQYLF 257


>gi|334326414|ref|XP_003340753.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
           [Monodelphis domestica]
          Length = 1651

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 170/359 (47%), Gaps = 61/359 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQV 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L  +   L E
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGGNDLEVLPDTL-GALPNLRE 201

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG-------------------- 228
           L   +N L+ +P  +G+L RL+ LD+ +N++  +P+ +SG                    
Sbjct: 202 LWLDRNQLSTLPPELGNLRRLVCLDVSENKLEQLPAEVSGLTLLTDLLLSQNLLERLPDG 261

Query: 229 --------------------------CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
                                     C +L+E  +  N L+ALP  LGKL+KL  L++  
Sbjct: 262 IGQLKQLSILKVDQNRLCEVTETIGECENLSELILTENMLTALPRSLGKLTKLTNLNVDR 321

Query: 263 NQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           N+L     E   C   L+VL L +N L+ LPPE+   T L  L + GN L++L  +L +
Sbjct: 322 NRLGTLPAEVGGC-TSLNVLSLRDNRLASLPPELAGTTELHVLDVAGNRLQSLPFALTH 379



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 121/241 (50%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENKLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+   T L     S N L+ LP  +G+   LS  K   N +  + E + +C  +S 
Sbjct: 234 QLPAEVSGLTLLTDLLLSQNLLERLPDGIGQLKQLSILKVDQNRLCEVTETIGECENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++N+L  +P ++G L++L  L++ +NR+ ++P+
Sbjct: 293 -----------------------ELILTENMLTALPRSLGKLTKLTNLNVDRNRLGTLPA 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            + GC SL    + +N L++LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EVGGCTSLNVLSLRDNRLASLPPELAGTTELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L VL  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQVLPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LS LP ELG L +L
Sbjct: 163 LKSLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L++   E +    L+ L LS N L  LP  IG++  L              
Sbjct: 223 VCLDVSENKLEQLPAEVSGLTLLTDLLLSQNLLERLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL E  ++         I     LS    EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRLCEVTET---------IGECENLS----ELILTENMLTALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN +  LP E+  C SL V
Sbjct: 307 SLGKLTKLTNLNVDRNRLGTLPAEVGGCTSLNV 339


>gi|348555822|ref|XP_003463722.1| PREDICTED: protein scribble homolog isoform 2 [Cavia porcellus]
          Length = 1629

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTEL-------------IASKNLLNGMPETI 203
                                    S   L EL             + S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQNLLQRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 323 HLEVLPPEIGGC-VALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPFALTH 379



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 SLEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPVELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPVELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|359728058|ref|ZP_09266754.1| hypothetical protein Lwei2_14512 [Leptospira weilii str.
           2006001855]
          Length = 331

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 126/243 (51%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++ + +L +L   I     L+   ++ N I  +P EIG+ T L     + NQL  LP 
Sbjct: 47  VLDLQYQRLEKLSKEIVLFKNLEWFQLTGNQITTLPREIGTLTRLKGLYLAENQLTVLPD 106

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL +     N ++ LP+ + +   + +L ++ NKL  L N  I     L +   
Sbjct: 107 EIGQLQNLKELFLFYNYLSYLPKLIGNLKALQELHIDNNKLEALPNE-IGKLNNLQKFGL 165

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P+ IG L  L  L+L+ N+  S+P  I    +L   ++ +N L+ LP E+G+
Sbjct: 166 SHNRLKELPKEIGRLQNLEELNLNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQ 225

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           LS+L TL L  N L+    E  QL  L  LDLS N LS +P EIG++  LR L L   PL
Sbjct: 226 LSRLETLTLFRNSLETLPEEIGQLWNLRELDLSYNPLSSIPKEIGQLKNLRILHLRKTPL 285

Query: 311 RTL 313
             L
Sbjct: 286 ARL 288



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 112/217 (51%), Gaps = 1/217 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L LA N +  L +++  L  L  L + +N LS LP  IG L  L+ L +  N +  +
Sbjct: 91  LKGLYLAENQLTVLPDEIGQLQNLKELFLFYNYLSYLPKLIGNLKALQELHIDNNKLEAL 150

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EIG    L KF  S N+LKELP  +GR  NL +   ++N  +SLP+++   S +  L 
Sbjct: 151 PNEIGKLNNLQKFGLSHNRLKELPKEIGRLQNLEELNLNSNQFSSLPKEIGQLSNLKNLH 210

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N L  L    I   + L  L   +N L  +PE IG L  L  LDL  N + SIP  I
Sbjct: 211 LDHNMLANLPKE-IGQLSRLETLTLFRNSLETLPEEIGQLWNLRELDLSYNPLSSIPKEI 269

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
               +L   ++    L+ LP E+G+L  L  L L+ +
Sbjct: 270 GQLKNLRILHLRKTPLARLPDEIGELQDLEELILNPD 306



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 132/288 (45%), Gaps = 38/288 (13%)

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D    +L++L   +    NL  F+ + N IT+LP ++   +++  L +  N+LTVL +  
Sbjct: 49  DLQYQRLEKLSKEIVLFKNLEWFQLTGNQITTLPREIGTLTRLKGLYLAENQLTVLPDE- 107

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I     L EL    N L+ +P+ IG+L  L  L +  N++ ++P+ I    +L +F + +
Sbjct: 108 IGQLQNLKELFLFYNYLSYLPKLIGNLKALQELHIDNNKLEALPNEIGKLNNLQKFGLSH 167

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G+L  L  L+L+SNQ      E  QL  L  L L +N L+ LP EIG+++
Sbjct: 168 NRLKELPKEIGRLQNLEELNLNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLS 227

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L  L L  N L TL                    PE             I     L   
Sbjct: 228 RLETLTLFRNSLETL--------------------PEE------------IGQLWNL--- 252

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +EL L    LS+IP EI +   +  L L +  +  LP E+     L+
Sbjct: 253 -RELDLSYNPLSSIPKEIGQLKNLRILHLRKTPLARLPDEIGELQDLE 299



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 111/256 (43%), Gaps = 46/256 (17%)

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIA----SWTMLTELIASKNLLNGMPETIGSLSRLIR 211
             + SK   LD++  +L  LS  ++      W  LT      N +  +P  IG+L+RL  
Sbjct: 39  FQNPSKRKVLDLQYQRLEKLSKEIVLFKNLEWFQLT-----GNQITTLPREIGTLTRLKG 93

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L L +N++  +P  I    +L E ++  N LS LP  +G L  L  L + +N+L+    E
Sbjct: 94  LYLAENQLTVLPDEIGQLQNLKELFLFYNYLSYLPKLIGNLKALQELHIDNNKLEALPNE 153

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L  L    LS+N L  LP EIG++  L +L L  N                      
Sbjct: 154 IGKLNNLQKFGLSHNRLKELPKEIGRLQNLEELNLNSNQF-------------------- 193

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           S LP+ E  + S  K                L L+   L+ +P EI +   +  L L RN
Sbjct: 194 SSLPK-EIGQLSNLKN---------------LHLDHNMLANLPKEIGQLSRLETLTLFRN 237

Query: 391 SIQELPPELSSCASLQ 406
           S++ LP E+    +L+
Sbjct: 238 SLETLPEEIGQLWNLR 253


>gi|405958960|gb|EKC25038.1| hypothetical protein CGI_10020952 [Crassostrea gigas]
          Length = 779

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 192/388 (49%), Gaps = 40/388 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KLI++ N+I  + +++ N+  LT L++S N L+ELP  IG L  L  L++S N I  +
Sbjct: 200 LKKLIVSGNSISHIPDNINNVLTLTYLDLSDNDLTELPNQIGYLKYLHYLNISKNKIGYL 259

Query: 107 PDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           P+EI +   AL     S NQ+K LP  + +   L   + ++N I +LP++      + +L
Sbjct: 260 PEEITTLHFALTFLHASDNQIKRLPKEIHKLQRLQVLELADNQIETLPDNFYQLKNIKRL 319

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+ GNKL+  +   I+    +  +  ++N L  +PE + +L  L+ +D+  N I  IP +
Sbjct: 320 DLSGNKLSTAAG--ISKLKSVEHIGLARNSLTALPEDLPNLKSLVSIDVTGNYIKVIPEN 377

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           +    +L  F   +N +S +P  LG+   +  L +  N+L+    +  +LR L V ++++
Sbjct: 378 LHKVGTLKSFKASDNKISNIPESLGENQLITELCVSKNRLQGLPQDMKKLRSLEVFEMAD 437

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEAST 343
           N ++ LP     +  LR L + GN L  L           L K L S  L  N  S  S 
Sbjct: 438 NDINALPKTFDFLKFLRVLDVAGNGLNEL----------MLPKTLTSLNLSSNPISLPSV 487

Query: 344 TKEDLITM------ATRLSVTS-------------------KELSLEGMNLSAIPSEIWE 378
             + ++T+      A++++V                     K+L++    +  IP E+ +
Sbjct: 488 DPKSVLTILGEKTWASQMTVLELESIKLEEVPSTLSHMKLLKKLNMRSNLIKVIPDELCK 547

Query: 379 AGEITKLDLSRNSIQELPPELSSCASLQ 406
              + +LD+S N + +LP  +S+  +L+
Sbjct: 548 LRLLEELDVSNNELADLPDSMSNMKNLR 575



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 188/406 (46%), Gaps = 25/406 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNN-IEKLKEDLRNLPLLTV 72
           ++ S   ++  P E++KN +   + +++          L  NN ++KL + + +L  L  
Sbjct: 40  VDFSTNGIKAFPQEIWKNEEIMNKANRF----------LGENNRLKKLPKTISDLDNLEF 89

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           +++ +N L  LP  I ++  LK L    N +  +P  I  A +L      +N++K LP +
Sbjct: 90  IDLRNNSLGALPGTIFKIKALKELQCGNNGLKTLPATINKAPSLEYLYAQNNKIKALPKT 149

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +C  L     + N I S+ + + +    + L +  N+L  L +  + +   L +LI S
Sbjct: 150 INKCPALVLIDLTENVIRSVKKTIYEVG--ATLILSKNRLVELPDATVKN-PALKKLIVS 206

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N ++ +P+ I ++  L  LDL  N +  +P+ I     L    +  N +  LP E+  L
Sbjct: 207 GNSISHIPDNINNVLTLTYLDLSDNDLTELPNQIGYLKYLHYLNISKNKIGYLPEEITTL 266

Query: 253 S-KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              L  L    NQ+K    E  +L RL VL+L++N +  LP    ++  +++L L+GN L
Sbjct: 267 HFALTFLHASDNQIKRLPKEIHKLQRLQVLELADNQIETLPDNFYQLKNIKRLDLSGNKL 326

Query: 311 RTLR--SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL-------SVTSKE 361
            T    S L +     L +   + LPE+  +  S    D+     ++         T K 
Sbjct: 327 STAAGISKLKSVEHIGLARNSLTALPEDLPNLKSLVSIDVTGNYIKVIPENLHKVGTLKS 386

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
                  +S IP  + E   IT+L +S+N +Q LP ++    SL+V
Sbjct: 387 FKASDNKISNIPESLGENQLITELCVSKNRLQGLPQDMKKLRSLEV 432



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 152/340 (44%), Gaps = 42/340 (12%)

Query: 14  LNLSNRSLRDVPNEVY--KNFDEAG-EGDKWWEAVDLQKLI------LAHNNIEKLKEDL 64
           L L++  +  +P+  Y  KN       G+K   A  + KL       LA N++  L EDL
Sbjct: 296 LELADNQIETLPDNFYQLKNIKRLDLSGNKLSTAAGISKLKSVEHIGLARNSLTALPEDL 355

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
            NL  L  ++V+ N +  +P  + ++  LKS   S N I  IP+ +G    + +   S N
Sbjct: 356 PNLKSLVSIDVTGNYIKVIPENLHKVGTLKSFKASDNKISNIPESLGENQLITELCVSKN 415

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK------------- 171
           +L+ LP  + +  +L  F+ ++N I +LP+       +  LDV GN              
Sbjct: 416 RLQGLPQDMKKLRSLEVFEMADNDINALPKTFDFLKFLRVLDVAGNGLNELMLPKTLTSL 475

Query: 172 -----------------LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
                            LT+L     AS   + EL + K  L  +P T+  +  L +L++
Sbjct: 476 NLSSNPISLPSVDPKSVLTILGEKTWASQMTVLELESIK--LEEVPSTLSHMKLLKKLNM 533

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
             N I  IP  +     L E  + NN L+ LP  +  +  L  L+   N+++ +C   C 
Sbjct: 534 RSNLIKVIPDELCKLRLLEELDVSNNELADLPDSMSNMKNLRKLNASENKIQHFCPGLCL 593

Query: 275 L-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L +L  ++LS N++  LP   G++  + +L L+ N L  L
Sbjct: 594 LHQLEEINLSYNNIMELPENFGELNKVIRLDLSNNELMGL 633



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 179/433 (41%), Gaps = 92/433 (21%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +A  L+ L   +N I+ L + +   P L +++++ N +  +   I E+    +L +S N 
Sbjct: 129 KAPSLEYLYAQNNKIKALPKTINKCPALVLIDLTENVIRSVKKTIYEVGA--TLILSKNR 186

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           ++++PD      AL K   S N +  +P ++   L L+    S+N +T LP  +     +
Sbjct: 187 LVELPDATVKNPALKKLIVSGNSISHIPDNINNVLTLTYLDLSDNDLTELPNQIGYLKYL 246

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             L++  NK+  L   +      LT L AS N +  +P+ I  L RL  L+L  N+I ++
Sbjct: 247 HYLNISKNKIGYLPEEITTLHFALTFLHASDNQIKRLPKEIHKLQRLQVLELADNQIETL 306

Query: 223 P----------------------SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           P                      + IS   S+    +  N+L+ALP +L  L  L ++D+
Sbjct: 307 PDNFYQLKNIKRLDLSGNKLSTAAGISKLKSVEHIGLARNSLTALPEDLPNLKSLVSIDV 366

Query: 261 HSNQLK------------------------------------EYCVEACQLR-------- 276
             N +K                                    E CV   +L+        
Sbjct: 367 TGNYIKVIPENLHKVGTLKSFKASDNKISNIPESLGENQLITELCVSKNRLQGLPQDMKK 426

Query: 277 ---LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-R 332
              L V ++++N ++ LP     +  LR L + GN L  L           L K L S  
Sbjct: 427 LRSLEVFEMADNDINALPKTFDFLKFLRVLDVAGNGLNEL----------MLPKTLTSLN 476

Query: 333 LPENEDSEASTTKEDLITM------ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           L  N  S  S   + ++T+      A++++V    L LE + L  +PS +     + KL+
Sbjct: 477 LSSNPISLPSVDPKSVLTILGEKTWASQMTV----LELESIKLEEVPSTLSHMKLLKKLN 532

Query: 387 LSRNSIQELPPEL 399
           +  N I+ +P EL
Sbjct: 533 MRSNLIKVIPDEL 545



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 121/247 (48%), Gaps = 9/247 (3%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           G+K W A  +  L L    +E++   L ++ LL  LN+  N +  +P  + +L +L+ LD
Sbjct: 497 GEKTW-ASQMTVLELESIKLEEVPSTLSHMKLLKKLNMRSNLIKVIPDELCKLRLLEELD 555

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           VS N +  +PD + +   L K + S N+++     L     L +   S N I  LPE+  
Sbjct: 556 VSNNELADLPDSMSNMKNLRKLNASENKIQHFCPGLCLLHQLEEINLSYNNIMELPENFG 615

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI---ASKNLLNGMPETIGSLSRLIRLDL 214
           + +K+ +LD+  N+L  L  +    W +L  ++    SKN +N +P  +  L R+  L  
Sbjct: 616 ELNKVIRLDLSNNELMGLPED---KWDVLASMLFLDVSKNHINVVPTDLPYLYRIQVLKA 672

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEA 272
             N +  +P  I     L    + +N L +LP  + KL  L  L++  N++K +   +E+
Sbjct: 673 ACNDLTCLPGDIIKMVGLEVLDVSDNLLESLPDSICKLPNLTELNVSDNKIKSFPGKMES 732

Query: 273 CQLRLSV 279
            + R +V
Sbjct: 733 LKQRCTV 739



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 3/141 (2%)

Query: 29  YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAI 87
           Y N  E  E   + E   + +L L++N +  L ED  + L  +  L+VS N ++ +P  +
Sbjct: 604 YNNIMELPEN--FGELNKVIRLDLSNNELMGLPEDKWDVLASMLFLDVSKNHINVVPTDL 661

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
             L+ ++ L  + N +  +P +I     L   D S N L+ LP S+ +  NL++   S+N
Sbjct: 662 PYLYRIQVLKAACNDLTCLPGDIIKMVGLEVLDVSDNLLESLPDSICKLPNLTELNVSDN 721

Query: 148 CITSLPEDLADCSKMSKLDVE 168
            I S P  +    +   ++VE
Sbjct: 722 KIKSFPGKMESLKQRCTVNVE 742


>gi|242079987|ref|XP_002444762.1| hypothetical protein SORBIDRAFT_07g027580 [Sorghum bicolor]
 gi|241941112|gb|EES14257.1| hypothetical protein SORBIDRAFT_07g027580 [Sorghum bicolor]
          Length = 578

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 126/261 (48%), Gaps = 4/261 (1%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N IE L + +  L  L  L++S N++  LP AIG L  L  LD   N I  +PD IG  +
Sbjct: 263 NQIEWLPDSIGKLTGLVTLDISENRILTLPEAIGRLSSLAKLDAHSNRISHLPDSIGDLS 322

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L+  D   NQL  LP SLGR + L +   S N +TSLP+ +     + KL VE N L  
Sbjct: 323 NLIYLDLRGNQLASLPPSLGRLVKLEELDVSANHLTSLPDAIGSLKHLKKLIVETNNLDE 382

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I +   L EL A  N L  +PE +G L  L  L +  N I  +P++++    L E
Sbjct: 383 LPYT-IGNCVSLVELRAGYNHLKALPEAVGKLESLEVLSVRYNSIRGLPTTMASLTKLKE 441

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSN--QLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
                N L ++P     ++ L  L++ +N   L+        L  L  LD+SNN +  LP
Sbjct: 442 VDASFNELESIPENFCFVTSLVKLNVGNNFADLQSLPRSIGNLEMLEELDISNNQIRVLP 501

Query: 292 PEIGKMTTLRKLLLTGNPLRT 312
              G +  LR L    NPL+ 
Sbjct: 502 DSFGNLQHLRVLRAEENPLQV 522



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 113/222 (50%), Gaps = 3/222 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L KL    N I  L + + +L  L  L++  N+L+ LP ++G L  L+ LDVS N +  +
Sbjct: 301 LAKLDAHSNRISHLPDSIGDLSNLIYLDLRGNQLASLPPSLGRLVKLEELDVSANHLTSL 360

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IGS   L K    +N L ELP ++G C++L + +A  N + +LPE +     +  L 
Sbjct: 361 PDAIGSLKHLKKLIVETNNLDELPYTIGNCVSLVELRAGYNHLKALPEAVGKLESLEVLS 420

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN--RILSIPS 224
           V  N +  L   + AS T L E+ AS N L  +PE    ++ L++L++  N   + S+P 
Sbjct: 421 VRYNSIRGLPTTM-ASLTKLKEVDASFNELESIPENFCFVTSLVKLNVGNNFADLQSLPR 479

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           SI     L E  + NN +  LP   G L  L  L    N L+
Sbjct: 480 SIGNLEMLEELDISNNQIRVLPDSFGNLQHLRVLRAEENPLQ 521



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 37/214 (17%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +P++IG L+ L+ LD+ +NRIL++P +I    SLA+    +N +S LP  +G LS
Sbjct: 263 NQIEWLPDSIGKLTGLVTLDISENRILTLPEAIGRLSSLAKLDAHSNRISHLPDSIGDLS 322

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  LDL  NQL        +L +L  LD+S N L+ LP  IG +  L+KL++  N L  
Sbjct: 323 NLIYLDLRGNQLASLPPSLGRLVKLEELDVSANHLTSLPDAIGSLKHLKKLIVETNNLDE 382

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L  ++ N                                     V+  EL     +L A+
Sbjct: 383 LPYTIGN------------------------------------CVSLVELRAGYNHLKAL 406

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           P  + +   +  L +  NSI+ LP  ++S   L+
Sbjct: 407 PEAVGKLESLEVLSVRYNSIRGLPTTMASLTKLK 440



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 8/214 (3%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L ++ N++  L + + +L  L  L V  N L ELP  IG    L  L   +N + 
Sbjct: 345 VKLEELDVSANHLTSLPDAIGSLKHLKKLIVETNNLDELPYTIGNCVSLVELRAGYNHLK 404

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+ +G   +L       N ++ LP+++     L +  AS N + S+PE+    + + K
Sbjct: 405 ALPEAVGKLESLEVLSVRYNSIRGLPTTMASLTKLKEVDASFNELESIPENFCFVTSLVK 464

Query: 165 LDVEGNKLTVLSN--NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           L+V GN    L +    I +  ML EL  S N +  +P++ G+L  L  L   +N +   
Sbjct: 465 LNV-GNNFADLQSLPRSIGNLEMLEELDISNNQIRVLPDSFGNLQHLRVLRAEENPLQVP 523

Query: 223 PSSIS--GCCSLAEF---YMGNNALSALPAELGK 251
           P  ++  G  +  ++   Y+   A  + P +  K
Sbjct: 524 PRDVALKGAQAAVQYMSEYVTKKATRSQPTKTKK 557


>gi|428174569|gb|EKX43464.1| hypothetical protein GUITHDRAFT_87793 [Guillardia theta CCMP2712]
          Length = 622

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 149/272 (54%), Gaps = 2/272 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL+  +N I +L +++ +L  L + N+  N++S LP ++  L+ L++L +S N +  I
Sbjct: 324 LRKLLANNNRISRLPDNVSSLTTLQLFNLDDNQISSLPDSLCLLYDLQTLSLSHNELTSI 383

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD+ G  T LV  + SSN+L+ LP+SL   ++L       N I SLP++ +  + +  L+
Sbjct: 384 PDQFGLLTGLVSCNLSSNKLQGLPASLSSLVSLQTLNVQENKIKSLPDNCSRLTSLRSLN 443

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N + +LS   I+   +L  L    N L  +P  I  L +L  LDL +NR++ +P+ +
Sbjct: 444 LDNNVIELLSPE-ISQLKVLQTLRMRHNKLRTLPWEIAQLEQLRHLDLGENRLMQLPAVV 502

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               S+    +  N+L +LP  +G L+ L  L L  NQL+        L  L+ LDLS N
Sbjct: 503 GTLTSVVSLLLDKNSLESLPNSIGDLTNLEKLCLEDNQLQLLPPTFPSLSSLTYLDLSLN 562

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            +  LP +I +M +L++     N +  L SS+
Sbjct: 563 KIKFLPNQINRMKSLQEAYFQRNEISILPSSI 594



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 197/422 (46%), Gaps = 44/422 (10%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T   L+L++ ++ D+P++ + NF              L  L LA N +E L  ++ ++  
Sbjct: 182 TLTHLSLADNNISDIPSD-FGNFKA------------LHHLDLAGNQLEALAPEIGHVIS 228

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L+ +N++ NK+  +P   G L  L  LD+S N I  IP E+G  TAL       N L  L
Sbjct: 229 LSRVNLARNKIVSIPFEWGLLSNLSELDLSGNPISSIPQELGQLTALECLHVDRNPLTSL 288

Query: 130 PSSLGRCLNLSDF--KASNNCITSLPEDLADCSK-MSKLDVEGNKLTVLSNNLIASWTML 186
           P SL    NL D   + SNN +TSLP  L D  K + KL    N+++ L +N ++S T L
Sbjct: 289 PRSLCHLTNLRDLVVQFSNNRLTSLPPSLFDGMKSLRKLLANNNRISRLPDN-VSSLTTL 347

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                  N ++ +P+++  L  L  L L  N + SIP        L    + +N L  LP
Sbjct: 348 QLFNLDDNQISSLPDSLCLLYDLQTLSLSHNELTSIPDQFGLLTGLVSCNLSSNKLQGLP 407

Query: 247 AELGKLSKLGTLDLHSNQLK---EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           A L  L  L TL++  N++K   + C     LR   L+L NN +  L PEI ++  L+ L
Sbjct: 408 ASLSSLVSLQTLNVQENKIKSLPDNCSRLTSLR--SLNLDNNVIELLSPEISQLKVLQTL 465

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRL----SVT 358
            +  N LRTL   +      A L+ LR   L EN   +       L ++ + L    S+ 
Sbjct: 466 RMRHNKLRTLPWEI------AQLEQLRHLDLGENRLMQLPAVVGTLTSVVSLLLDKNSLE 519

Query: 359 S-----------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           S           ++L LE   L  +P        +T LDLS N I+ LP +++   SLQ 
Sbjct: 520 SLPNSIGDLTNLEKLCLEDNQLQLLPPTFPSLSSLTYLDLSLNKIKFLPNQINRMKSLQE 579

Query: 408 KF 409
            +
Sbjct: 580 AY 581



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 192/411 (46%), Gaps = 56/411 (13%)

Query: 38  GDKWWEAVDL----------QKLI---LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP 84
           G   WE++ L          ++L+   L++N++ +    LR+L LL  L +  N+L ++P
Sbjct: 21  GSLHWESLKLSSLPQQIRLSERLVSIKLSNNDLVEFPSSLRSLKLLHTLELDANQLVKIP 80

Query: 85  AAIGELHMLKSLDVSFNSIMKIPDEIG-----------------------SATALVKFDC 121
            AIGE   +KSL +  N +++I  EIG                       S TAL   + 
Sbjct: 81  PAIGEFQSMKSLFLHNNCLVQIAPEIGQLGNLKVLLLQGNRLHEVPLELCSCTALTTLNL 140

Query: 122 S-SNQLKELPSSLGRCLNLSD-FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
             +N+L+ LP  +GR   L+  F A  N + SLP   +    ++ L +  N ++ + ++ 
Sbjct: 141 QDNNKLQSLPMKVGRLTGLTRLFIADGNLLDSLPASFSYIETLTHLSLADNNISDIPSD- 199

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
             ++  L  L  + N L  +   IG +  L R++L +N+I+SIP       +L+E  +  
Sbjct: 200 FGNFKALHHLDLAGNQLEALAPEIGHVISLSRVNLARNKIVSIPFEWGLLSNLSELDLSG 259

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ---LRLSVLDLSNNSLSGLPPEI-G 295
           N +S++P ELG+L+ L  L +  N L       C    LR  V+  SNN L+ LPP +  
Sbjct: 260 NPISSIPQELGQLTALECLHVDRNPLTSLPRSLCHLTNLRDLVVQFSNNRLTSLPPSLFD 319

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
            M +LRKLL   N +  L  ++ +  T  L           +D++ S+  + L  +    
Sbjct: 320 GMKSLRKLLANNNRISRLPDNVSSLTTLQLFNL--------DDNQISSLPDSLCLLYDL- 370

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
               + LSL    L++IP +      +   +LS N +Q LP  LSS  SLQ
Sbjct: 371 ----QTLSLSHNELTSIPDQFGLLTGLVSCNLSSNKLQGLPASLSSLVSLQ 417



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 194/430 (45%), Gaps = 71/430 (16%)

Query: 40  KWWEAVDLQKLILAHNNI-EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           K      L +L +A  N+ + L      +  LT L+++ N +S++P+  G    L  LD+
Sbjct: 152 KVGRLTGLTRLFIADGNLLDSLPASFSYIETLTHLSLADNNISDIPSDFGNFKALHHLDL 211

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           + N +  +  EIG   +L + + + N++  +P   G   NLS+   S N I+S+P++L  
Sbjct: 212 AGNQLEALAPEIGHVISLSRVNLARNKIVSIPFEWGLLSNLSELDLSGNPISSIPQELGQ 271

Query: 159 CSKMSKLDVEGNKLTVL-----------------SNNLIAS--------WTMLTELIASK 193
            + +  L V+ N LT L                 SNN + S           L +L+A+ 
Sbjct: 272 LTALECLHVDRNPLTSLPRSLCHLTNLRDLVVQFSNNRLTSLPPSLFDGMKSLRKLLANN 331

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N ++ +P+ + SL+ L   +L  N+I S+P S+     L    + +N L+++P + G L+
Sbjct: 332 NRISRLPDNVSSLTTLQLFNLDDNQISSLPDSLCLLYDLQTLSLSHNELTSIPDQFGLLT 391

Query: 254 KLGTLDLHSNQLK--------------------------EYCVEACQLRLSVLDLSNNSL 287
            L + +L SN+L+                          + C     LR   L+L NN +
Sbjct: 392 GLVSCNLSSNKLQGLPASLSSLVSLQTLNVQENKIKSLPDNCSRLTSLR--SLNLDNNVI 449

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKE 346
             L PEI ++  L+ L +  N LRTL   +      A L+ LR   L EN   +      
Sbjct: 450 ELLSPEISQLKVLQTLRMRHNKLRTLPWEI------AQLEQLRHLDLGENRLMQLPA--- 500

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
               + T  SV S  L L+  +L ++P+ I +   + KL L  N +Q LPP   S +SL 
Sbjct: 501 ---VVGTLTSVVS--LLLDKNSLESLPNSIGDLTNLEKLCLEDNQLQLLPPTFPSLSSL- 554

Query: 407 VKFSDLVTNK 416
             + DL  NK
Sbjct: 555 -TYLDLSLNK 563



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 118/243 (48%), Gaps = 24/243 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           DLQ L L+HN +  + +    L  L   N+S NKL  LPA++  L  L++L+V  N I  
Sbjct: 369 DLQTLSLSHNELTSIPDQFGLLTGLVSCNLSSNKLQGLPASLSSLVSLQTLNVQENKIKS 428

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PD     T+L   +  +N ++ L   + +   L   +  +N + +LP ++A   ++  L
Sbjct: 429 LPDNCSRLTSLRSLNLDNNVIELLSPEISQLKVLQTLRMRHNKLRTLPWEIAQLEQLRHL 488

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG--------------------- 204
           D+  N+L  L   ++ + T +  L+  KN L  +P +IG                     
Sbjct: 489 DLGENRLMQLP-AVVGTLTSVVSLLLDKNSLESLPNSIGDLTNLEKLCLEDNQLQLLPPT 547

Query: 205 --SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
             SLS L  LDL  N+I  +P+ I+   SL E Y   N +S LP+ +   + L TL+L +
Sbjct: 548 FPSLSSLTYLDLSLNKIKFLPNQINRMKSLQEAYFQRNEISILPSSISLCTGLHTLNLAN 607

Query: 263 NQL 265
           NQ+
Sbjct: 608 NQV 610


>gi|148921804|gb|AAI46322.1| Scribbled homolog (Drosophila) [synthetic construct]
          Length = 1655

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+   T L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTH 379



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|355699846|gb|AES01257.1| leucine rich repeat containing 1 [Mustela putorius furo]
          Length = 404

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 172/354 (48%), Gaps = 36/354 (10%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           +++++ V L+KL L+ N I++L  ++ N   L  L+VS N + E+P +I     L+  D 
Sbjct: 86  EQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADF 145

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N + ++P+       L     +   L+ LP ++G   NL+  +   N +T LP+ L  
Sbjct: 146 SGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQ 205

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             ++ +LD+  N++  L  + I +   L +L    N L+ +P+ IG+L  L+ LD+ +NR
Sbjct: 206 LRRLEELDLGNNEIYNLPES-IGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENR 264

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 278
           +  +P  ISG  SL +  +  N L  +P  +GKL K                      LS
Sbjct: 265 LERLPEEISGLTSLTDLVISQNLLEVIPDGIGKLKK----------------------LS 302

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
           +L +  N L+ LP  +G   +L +L+LT N L TL  S+        LK L S L  + +
Sbjct: 303 ILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSI------GKLKKL-SNLNADRN 355

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
              S  KE  I     L+V      +    L+ IPSE+ +A E+  LD++ N +
Sbjct: 356 KLVSLPKE--IGGCCSLTV----FCVRDNRLTRIPSEVSQATELHVLDVAGNRL 403



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 158/335 (47%), Gaps = 23/335 (6%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 79  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 138

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 139 ALQIADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 195

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 196 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 255

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+    E   L  L+ L +S N L  +P  IGK+  L  L +  N L  L 
Sbjct: 256 LCLDVSENRLERLPEEISGLTSLTDLVISQNLLEVIPDGIGKLKKLSILKVDQNRLTQLP 315

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAI 372
            ++  G   +L             +E   T+  L+T+   +    K   L+ +   L ++
Sbjct: 316 EAV--GDCESL-------------TELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSL 360

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           P EI     +T   +  N +  +P E+S    L V
Sbjct: 361 PKEIGGCCSLTVFCVRDNRLTRIPSEVSQATELHV 395



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 145/310 (46%), Gaps = 36/310 (11%)

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL- 179
           C  NQL+ELP    + + L     S+N I  LP ++A+  ++ +LDV  N +  +  ++ 
Sbjct: 76  CXXNQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIS 135

Query: 180 ------IASWTM--LTELIAS----KNL---------LNGMPETIGSLSRLIRLDLHQNR 218
                 IA ++   LT L  S    +NL         L  +PE IG+L  L  L+L +N 
Sbjct: 136 FCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENL 195

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           +  +P S++    L E  +GNN +  LP  +G L  L  L L  NQL E   E   L+ L
Sbjct: 196 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 255

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             LD+S N L  LP EI  +T+L  L+++ N L  +   +      ++LK  ++RL   +
Sbjct: 256 LCLDVSENRLERLPEEISGLTSLTDLVISQNLLEVIPDGIGKLKKLSILKVDQNRL--TQ 313

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
             EA    E L            EL L    L  +P  I +  +++ L+  RN +  LP 
Sbjct: 314 LPEAVGDCESLT-----------ELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 362

Query: 398 ELSSCASLQV 407
           E+  C SL V
Sbjct: 363 EIGGCCSLTV 372



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 41/232 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L +L  S N +  +P  I +  +L+ LD+ +N I  IP SIS C +L       N L+ L
Sbjct: 94  LRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRL 153

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P    +L  L  L ++   L+        L  L+ L+L  N L+ LP  + ++  L +L 
Sbjct: 154 PESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELD 213

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N +  L  S+      ALL                                 K+L L
Sbjct: 214 LGNNEIYNLPESI-----GALLHL-------------------------------KDLWL 237

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 238 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 285


>gi|340713138|ref|XP_003395105.1| PREDICTED: protein lap4-like isoform 1 [Bombus terrestris]
 gi|340713140|ref|XP_003395106.1| PREDICTED: protein lap4-like isoform 2 [Bombus terrestris]
 gi|340713144|ref|XP_003395108.1| PREDICTED: protein lap4-like isoform 4 [Bombus terrestris]
          Length = 1599

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 166/365 (45%), Gaps = 61/365 (16%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D IL+ +R+   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  DDILRYSRSLEELLLDANHIRDLP----KNF---------FRLQKLRKLGLSDNEIHRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP-------------- 107
            D++N   L  L+VS N + ++P  I  L  L+  D S N I ++P              
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGL 136

Query: 108 ---------DEIGSATALVKFDCSSNQLKELPSSL-----------------------GR 135
                     + GS  AL   +   N LK LP SL                       G+
Sbjct: 137 NDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGK 196

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
              L +    +N +  LP ++ +   ++ LDV  N+L  L    I     LT+L  S+N+
Sbjct: 197 LPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEE-IGGLESLTDLHLSQNV 255

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           +  +P+ +G L +L  L + QNR+ ++ S+I  C +L E  +  N L  LP  +GKL  L
Sbjct: 256 IEKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNL 315

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L++  N L+    E   L+ L VL L +N L  LP E+G+ T L  L ++GN L+ L 
Sbjct: 316 NNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLP 375

Query: 315 SSLVN 319
            SL+N
Sbjct: 376 YSLIN 380



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 126/239 (52%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L E L  L  L  L++  N +  LPA IG+L  L+ L +  N +  +
Sbjct: 154 LQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L   D S N+L++LP  +G   +L+D   S N I  LP+ L +  K++ L 
Sbjct: 214 PPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L+ L++N I     L ELI ++N L  +P TIG L  L  L++ +N + S+P+ I
Sbjct: 274 VDQNRLSTLNSN-IGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
                L    + +N L  LP E+G+ + L  LD+  N+L+        L L  + LS N
Sbjct: 333 GNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAVWLSKN 391



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 112/262 (42%), Gaps = 38/262 (14%)

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N I  LP++     K+ KL +  N++  L  + I ++  L EL  S+N +  +PE I +L
Sbjct: 47  NHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPD-IQNFENLVELDVSRNDIPDIPENIKNL 105

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L   D   N I  +P+      +L    + + +L+ LP + G L  L +L+L  N LK
Sbjct: 106 RALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLK 165

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
                  QL +L  LDL +N +  LP  IGK+  L++L L  N L+ L   +    T A 
Sbjct: 166 SLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGELKTLAC 225

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           L    +RL            EDL                        P EI     +T L
Sbjct: 226 LDVSENRL------------EDL------------------------PEEIGGLESLTDL 249

Query: 386 DLSRNSIQELPPELSSCASLQV 407
            LS+N I++LP  L     L +
Sbjct: 250 HLSQNVIEKLPDGLGELQKLTI 271


>gi|355390315|ref|NP_056171.3| protein scribble homolog isoform b [Homo sapiens]
          Length = 1630

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+   T L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTH 379



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|261260101|sp|Q14160.4|SCRIB_HUMAN RecName: Full=Protein scribble homolog; Short=Scribble;
           Short=hScrib; AltName: Full=Protein LAP4
          Length = 1630

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+   T L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTH 379



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTTELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|440801654|gb|ELR22663.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 936

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 191/432 (44%), Gaps = 60/432 (13%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L N++L D+P +                  +L  L L HN IE L  ++ NL  LT+ 
Sbjct: 42  LDLKNQNLTDLPKDFIIE--------------ELTWLSLNHNAIESLPPEIANLTRLTIF 87

Query: 74  NVSHNKLSEL-----------------------PAAIGELHMLKSLDVSFNSIMKIPDEI 110
            +  NKL  L                       P  IG+L +LK L V +N + ++P E+
Sbjct: 88  RLFGNKLKSLPPEIGALAHLTTLDLGKNLLSSLPPQIGDLSLLKELHVHWNRLEEVPPEV 147

Query: 111 GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
           G  TAL   +   N+L  LP  L     L +   ++N  ++LP  +A  S ++ L + GN
Sbjct: 148 GKLTALHTLNLYINRLTTLPDELQSLTALENLDIAHNAFSTLPAVIAQFSSLTNLKLVGN 207

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
               + N L +    L +L    N L  +P  IG+L+ L  L L  N + S+P+ +    
Sbjct: 208 DFKSIGNEL-SHAVCLQKLDLRCNFLTTLPPEIGNLTALRHLLLRNNCLTSLPAELGNLS 266

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGL 290
            L E  +GNN L+ +P E+ +LS L  LD   NQ+ E       + L  LD+S N+L  L
Sbjct: 267 ELLELSLGNNKLTWVPPEITRLSNLRNLDFWENQISELPDLGGLVSLQELDVSFNTLQAL 326

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P  +  +T+LR+L    N L +L +S+      + L    +R+ E     A       ++
Sbjct: 327 PEGLETLTSLRRLWANNNELTSLPASIRGLVGLSELSVTSNRITELPSEIAQ------LS 380

Query: 351 MATRLSVTSKELS----------------LEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
             +RLS ++  +S                L   NL   P  ++EA  + +L+L  N +  
Sbjct: 381 CLSRLSASANFISELNVDLSNLQHLWCLELGHNNLMEFPVSVFEAPGLLQLNLFGNGLSV 440

Query: 395 LPPELSSCASLQ 406
           +P ++     LQ
Sbjct: 441 VPDDIGRLTKLQ 452



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 191/409 (46%), Gaps = 66/409 (16%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N +  L ++L++L  L  L+++HN  S LPA I +   L +L +  N    I
Sbjct: 153 LHTLNLYINRLTTLPDELQSLTALENLDIAHNAFSTLPAVIAQFSSLTNLKLVGNDFKSI 212

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            +E+  A  L K D   N L  LP  +G    L      NNC+TSLP +L + S++ +L 
Sbjct: 213 GNELSHAVCLQKLDLRCNFLTTLPPEIGNLTALRHLLLRNNCLTSLPAELGNLSELLELS 272

Query: 167 VEGNKL-------TVLSN--NL------------IASWTMLTELIASKNLLNGMPETIGS 205
           +  NKL       T LSN  NL            +     L EL  S N L  +PE + +
Sbjct: 273 LGNNKLTWVPPEITRLSNLRNLDFWENQISELPDLGGLVSLQELDVSFNTLQALPEGLET 332

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L+ L RL  + N + S+P+SI G   L+E  + +N ++ LP+E+ +LS L  L   +N +
Sbjct: 333 LTSLRRLWANNNELTSLPASIRGLVGLSELSVTSNRITELPSEIAQLSCLSRLSASANFI 392

Query: 266 KE-----------YCVE-----ACQLRLSV--------LDLSNNSLSGLPPEIGKMTTLR 301
            E           +C+E       +  +SV        L+L  N LS +P +IG++T L+
Sbjct: 393 SELNVDLSNLQHLWCLELGHNNLMEFPVSVFEAPGLLQLNLFGNGLSVVPDDIGRLTKLQ 452

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRS----RLPENEDSEASTTKEDLITMATRLSV 357
           +L L+ N +  L         P  +K + +     +  N  +E      +L T+      
Sbjct: 453 RLYLSCNKIEHL---------PEQMKEMVALKDLYIGSNSFTEFPPVVFELTTL------ 497

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             +ELSL   N S +P  I +   +  L ++ N I+ELP E+ +  +L+
Sbjct: 498 --RELSLANSNFSVVPPHISKLAGLEVLHMNGNEIKELPAEIGALINLK 544



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 179/357 (50%), Gaps = 18/357 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L+L +N +  L  +L NL  L  L++ +NKL+ +P  I  L  L++LD   N I ++
Sbjct: 245 LRHLLLRNNCLTSLPAELGNLSELLELSLGNNKLTWVPPEITRLSNLRNLDFWENQISEL 304

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +G   +L + D S N L+ LP  L    +L    A+NN +TSLP  +     +S+L 
Sbjct: 305 PD-LGGLVSLQELDVSFNTLQALPEGLETLTSLRRLWANNNELTSLPASIRGLVGLSELS 363

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N++T L +  IA  + L+ L AS N ++ +   + +L  L  L+L  N ++  P S+
Sbjct: 364 VTSNRITELPSE-IAQLSCLSRLSASANFISELNVDLSNLQHLWCLELGHNNLMEFPVSV 422

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL--SN 284
                L +  +  N LS +P ++G+L+KL  L L  N++ E+  E  +  +++ DL   +
Sbjct: 423 FEAPGLLQLNLFGNGLSVVPDDIGRLTKLQRLYLSCNKI-EHLPEQMKEMVALKDLYIGS 481

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           NS +  PP + ++TTLR+L L  +       S+V      L       +  NE  E    
Sbjct: 482 NSFTEFPPVVFELTTLRELSLANSNF-----SVVPPHISKLAGLEVLHMNGNEIKELPAE 536

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
              LI +        KEL L    L+A+P+E      + +LD+S N +  LP  + S
Sbjct: 537 IGALINL--------KELDLSHNCLAALPAEFTALRRLAELDISHNELTSLPVGIKS 585



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 154/323 (47%), Gaps = 8/323 (2%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V LQ+L ++ N ++ L E L  L  L  L  ++N+L+ LPA+I  L  L  L V+ N I 
Sbjct: 311 VSLQELDVSFNTLQALPEGLETLTSLRRLWANNNELTSLPASIRGLVGLSELSVTSNRIT 370

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P EI   + L +   S+N + EL   L    +L   +  +N +   P  + +   + +
Sbjct: 371 ELPSEIAQLSCLSRLSASANFISELNVDLSNLQHLWCLELGHNNLMEFPVSVFEAPGLLQ 430

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++ GN L+V+ ++ I   T L  L  S N +  +PE +  +  L  L +  N     P 
Sbjct: 431 LNLFGNGLSVVPDD-IGRLTKLQRLYLSCNKIEHLPEQMKEMVALKDLYIGSNSFTEFPP 489

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            +    +L E  + N+  S +P  + KL+ L  L ++ N++KE   E   L  L  LDLS
Sbjct: 490 VVFELTTLRELSLANSNFSVVPPHISKLAGLEVLHMNGNEIKELPAEIGALINLKELDLS 549

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL-----PENED 338
           +N L+ LP E   +  L +L ++ N L +L   + +      LK   +RL     P  ED
Sbjct: 550 HNCLAALPAEFTALRRLAELDISHNELTSLPVGIKSFQQICQLKLGHNRLAKSHIPHFED 609

Query: 339 SEASTTKEDLITMATRLSVTSKE 361
                + E + T+AT      +E
Sbjct: 610 PNMWVSSEGM-TVATGGHAPRRE 631



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 14/183 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L  VP+++ +                LQ+L L+ N IE L E ++ +  L  L
Sbjct: 431 LNLFGNGLSVVPDDIGR-------------LTKLQRLYLSCNKIEHLPEQMKEMVALKDL 477

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N  +E P  + EL  L+ L ++ ++   +P  I     L     + N++KELP+ +
Sbjct: 478 YIGSNSFTEFPPVVFELTTLRELSLANSNFSVVPPHISKLAGLEVLHMNGNEIKELPAEI 537

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  +NL +   S+NC+ +LP +     ++++LD+  N+LT L    I S+  + +L    
Sbjct: 538 GALINLKELDLSHNCLAALPAEFTALRRLAELDISHNELTSLPVG-IKSFQQICQLKLGH 596

Query: 194 NLL 196
           N L
Sbjct: 597 NRL 599


>gi|386783705|gb|AFJ24747.1| SHOC2 [Schmidtea mediterranea]
          Length = 600

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 196/455 (43%), Gaps = 99/455 (21%)

Query: 11  SGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVD-------LQKLILAHNNIEKLKED 63
           S +L+LS+R L  +PN   KN  E    D   E ++       L++  L  N+I     +
Sbjct: 120 SNTLDLSSRGLSSIPNLKDKNIKELMLKDNKLERLEGFPVLMQLERCYLQQNSISVFPVE 179

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           L     L VL++  N++  +P  + EL  L+ L +S N I  IPD +     L       
Sbjct: 180 LSKCTGLKVLDLRSNRIEIIPECLFELQNLELLILSSNRIESIPDSVQKLQNLKHLGLDK 239

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N +  LP  +G+   L +   + N I  LPE+L +C+ M  LDV  N+LT L        
Sbjct: 240 NSISRLPPVIGKLQRLMNLNLAFNKIDELPEELCNCASMRDLDVMHNRLTEL-------- 291

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           PE++G+L  L+RL++  N+I  IP S+    +L EF M  N + 
Sbjct: 292 ----------------PESLGNLQNLVRLNIRNNQITKIPISLVKVKNLKEFIMEQNCVE 335

Query: 244 ALPAELGKLSKLGTLD---LHSNQLKEY----------------------CV-------- 270
            LP +   LS LG LD   L  N  K +                      C+        
Sbjct: 336 NLPDQF--LSNLGNLDNVNLSRNAFKTFPTGGPNQFATTMSLNMSNNHIDCIPMGIFSVS 393

Query: 271 -----------EACQL---------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
                      E C L          L  LDLS+N LS +P EIG +  L+KL L+ N +
Sbjct: 394 KHLSILNLRGNEICTLIPNDVVTWTTLVELDLSSNQLSIIPTEIGALVNLQKLHLSSNHI 453

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           + L  ++ N     LL        E +D++  +  +++  + + +     +L+L    L 
Sbjct: 454 KKLPPTIGNLNALVLL--------ELDDNQIESLPDEIGNLQSVV-----DLNLTTNELK 500

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           ++P+ I +   + KL L+ N ++ +PPE+   +SL
Sbjct: 501 SLPASIGKLKSLMKLRLAENDLRIVPPEIGEMSSL 535



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 183/394 (46%), Gaps = 64/394 (16%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           +E  +L+ LIL+ N IE + + ++ L  L  L +  N +S LP  IG+L  L +L+++FN
Sbjct: 204 FELQNLELLILSSNRIESIPDSVQKLQNLKHLGLDKNSISRLPPVIGKLQRLMNLNLAFN 263

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            I ++P+E+ +  ++   D   N+L ELP SLG   NL      NN IT +P  L     
Sbjct: 264 KIDELPEELCNCASMRDLDVMHNRLTELPESLGNLQNLVRLNIRNNQITKIPISLVKVKN 323

Query: 162 MSKLDVEGNKLTVLSNNLIAS------------------------WTMLTELIASKNLLN 197
           + +  +E N +  L +  +++                        +     L  S N ++
Sbjct: 324 LKEFIMEQNCVENLPDQFLSNLGNLDNVNLSRNAFKTFPTGGPNQFATTMSLNMSNNHID 383

Query: 198 GMPETIGSLSR-LIRLDLHQNRILS-IPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
            +P  I S+S+ L  L+L  N I + IP+ +    +L E  + +N LS +P E+G L  L
Sbjct: 384 CIPMGIFSVSKHLSILNLRGNEICTLIPNDVVTWTTLVELDLSSNQLSIIPTEIGALVNL 443

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L SN +K+       L  L +L+L +N +  LP EIG + ++  L LT N L++L 
Sbjct: 444 QKLHLSSNHIKKLPPTIGNLNALVLLELDDNQIESLPDEIGNLQSVVDLNLTTNELKSLP 503

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
           +S+  G   +L+K    RL EN+                               L  +P 
Sbjct: 504 ASI--GKLKSLMKL---RLAEND-------------------------------LRIVPP 527

Query: 375 EIWEAGEITKLDLSRN-SIQELPPELSSCASLQV 407
           EI E   +T+L L  N ++  LP EL+ C  L +
Sbjct: 528 EIGEMSSLTELHLKNNVNLDNLPEELTLCEKLMI 561



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 13/125 (10%)

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           L  NS+S  P E+ K T L+ L L  N +  +   L       LL    +R+    DS  
Sbjct: 168 LQQNSISVFPVELSKCTGLKVLDLRSNRIEIIPECLFELQNLELLILSSNRIESIPDSVQ 227

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                             K L L+  ++S +P  I +   +  L+L+ N I ELP EL +
Sbjct: 228 KLQ-------------NLKHLGLDKNSISRLPPVIGKLQRLMNLNLAFNKIDELPEELCN 274

Query: 402 CASLQ 406
           CAS++
Sbjct: 275 CASMR 279


>gi|363731180|ref|XP_427026.3| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Gallus
           gallus]
          Length = 1894

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 193/401 (48%), Gaps = 51/401 (12%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNI 57
           R   +L+  + SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I
Sbjct: 13  RHVEALDRRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEI 72

Query: 58  EKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALV 117
           ++L  ++ N   L  L++S N + E+P +I     L+  D S N + ++P+      +L 
Sbjct: 73  QRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRLPEGFTQLRSLG 132

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
               +   L+ LP+ +G   NL   +   N + +LP  L+   K+ +LD+ GN L VL +
Sbjct: 133 HLALNDVSLQSLPNDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQLDLGGNDLEVLPD 192

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
            L  +   L EL   +N L+ +P  +G+L RL+ LD+ +N++  +P+ +SG  +L +  +
Sbjct: 193 TL-GALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNEVSGLVALTDLLL 251

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIG 295
             N L  +P  +G+L +L  L +  N+L E    +  C+  LS L L+ N L+ LP  +G
Sbjct: 252 SQNLLECIPDGIGQLKQLSILKVDQNRLTEVTESIGDCE-NLSELILTENMLTALPKSLG 310

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           K+T L  L +  N L +L +                                 I     L
Sbjct: 311 KLTKLTNLNVDRNRLTSLPAE--------------------------------IGGCANL 338

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           +V    LSL    L+ +P+E+    E+  LD++ N +Q LP
Sbjct: 339 NV----LSLRDNRLALLPAELANTTELHVLDVAGNRLQNLP 375



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 148/278 (53%), Gaps = 14/278 (5%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R+ G L L++ SL+ +PN++                 +L  L L  N ++ L   L  L 
Sbjct: 129 RSLGHLALNDVSLQSLPNDI-------------GNLANLVTLELRENLLKTLPTSLSFLV 175

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L++  N L  LP  +G L  L+ L +  N +  +P E+G+   LV  D S N+L++
Sbjct: 176 KLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQ 235

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP+ +   + L+D   S N +  +P+ +    ++S L V+ N+LT ++ + I     L+E
Sbjct: 236 LPNEVSGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTEVTES-IGDCENLSE 294

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           LI ++N+L  +P+++G L++L  L++ +NR+ S+P+ I GC +L    + +N L+ LPAE
Sbjct: 295 LILTENMLTALPKSLGKLTKLTNLNVDRNRLTSLPAEIGGCANLNVLSLRDNRLALLPAE 354

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
           L   ++L  LD+  N+L+        L L  L L+ N 
Sbjct: 355 LANTTELHVLDVAGNRLQNLPFALTNLNLKALWLAENQ 392



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 156/332 (46%), Gaps = 40/332 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 47  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCK 106

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LPE       +  L +    L  L N+ I +   L  L   +NL
Sbjct: 107 SLEIADF--SGNPLSRLPEGFTQLRSLGHLALNDVSLQSLPND-IGNLANLVTLELRENL 163

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L   
Sbjct: 164 LKTLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLR-- 221

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                               RL  LD+S N L  LP E+  +  L  LLL+ N L  +  
Sbjct: 222 --------------------RLVCLDVSENKLEQLPNEVSGLVALTDLLLSQNLLECIPD 261

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL E  +S         I     LS    EL L    L+A+P  
Sbjct: 262 GIGQLKQLSILKVDQNRLTEVTES---------IGDCENLS----ELILTENMLTALPKS 308

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           + +  ++T L++ RN +  LP E+  CA+L V
Sbjct: 309 LGKLTKLTNLNVDRNRLTSLPAEIGGCANLNV 340


>gi|348555820|ref|XP_003463721.1| PREDICTED: protein scribble homolog isoform 1 [Cavia porcellus]
          Length = 1653

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTEL-------------IASKNLLNGMPETI 203
                                    S   L EL             + S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQNLLQRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +L +
Sbjct: 323 HLEVLPPEIGGC-VALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPFALTH 379



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 SLEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E  VE   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPVELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPVELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|421106546|ref|ZP_15567112.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410008404|gb|EKO62075.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 525

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 168/353 (47%), Gaps = 20/353 (5%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN++  KL+ LP  IG+L  L+ L + +N ++ +P EI     L   D S NQL  LP+
Sbjct: 52  VLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLVILPN 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +GR  NL       N +T+LP+++     +  L    N+L +L    I     L  L  
Sbjct: 112 EIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKE-IGQLENLENLNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S+N L  +P+ IG L  L  L L  N+++++P+ I    +L E  +  N L  LP  +G+
Sbjct: 171 SENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGR 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TLDLH N+L     E  QL+ L  L+L NN L  LP EIG++  L+ L L  NPL
Sbjct: 231 LQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPL 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS------- 363
                  +    P     LR    + +    +  +E+ + +   LS+  K+ S       
Sbjct: 291 SFKERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVF-ELSLEYKDFSHLFPKVI 349

Query: 364 LEGMNLSA----------IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L+  NL +          +P EI     +  L L  N ++++P E+    +L+
Sbjct: 350 LKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLTLGLNGLKDIPSEIGQLRNLE 402



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 116/239 (48%), Gaps = 18/239 (7%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLT 71
           LNL+ + L  +P E+   KN  E     KW + V L K I+   N+E L           
Sbjct: 53  LNLNGQKLTSLPREIGQLKNLRELS--LKWNQLVTLPKEIVELQNLEHL----------- 99

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
             ++S N+L  LP  IG L  L+SLD+  N +  +P EIG    L       N+L  LP 
Sbjct: 100 --DLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPK 157

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL +   S N +T++P+++     + +L + GN+L  L N  I     L EL  
Sbjct: 158 EIGQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNE-IGQLRNLQELNL 216

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             N L  +P+ IG L  L  LDLH+NR+  +P       SL +  + NN L  LP E+G
Sbjct: 217 KWNQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIG 275



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 135/312 (43%), Gaps = 42/312 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS   L  VP E+              +  +LQ+L L+ N +  L  ++  L  L  
Sbjct: 167 NLNLSENRLTTVPKEI-------------GQLKNLQELHLSGNQLVTLPNEIGQLRNLQE 213

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L  LP  IG L  L++LD+  N +  +P E G   +L K +  +N+L  LP  
Sbjct: 214 LNLKWNQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKE 273

Query: 133 LGRC---------LNLSDFKASN-------NCITSLPEDLADCS------------KMSK 164
           +G+          +N   FK          NC   L E   D              K+ +
Sbjct: 274 IGQLQNLQDLDLLMNPLSFKERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVFE 333

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +E    + L   +I  +  L  L         +P+ IG L  L  L L  N +  IPS
Sbjct: 334 LSLEYKDFSHLFPKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLTLGLNGLKDIPS 393

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    +  N L  LP E+G+L  L  L LH N+LK + V   QL+ L  LDLS
Sbjct: 394 EIGQLRNLEALNLEANVLEGLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLS 453

Query: 284 NNSLSGLPPEIG 295
            N L  LP EIG
Sbjct: 454 ANELITLPKEIG 465



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 93/180 (51%), Gaps = 7/180 (3%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNL+  K     +TSLP ++     + +L ++ N+L  L    I     L  L  S+N
Sbjct: 51  RVLNLNGQK-----LTSLPREIGQLKNLRELSLKWNQLVTLPKE-IVELQNLEHLDLSEN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P  IG L  L  LDL++N++ ++P  I    +L   +   N L+ LP E+G+L  
Sbjct: 105 QLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLEN 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L  N+L     E  QL+ L  L LS N L  LP EIG++  L++L L  N L TL
Sbjct: 165 LENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTL 224



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 169/425 (39%), Gaps = 107/425 (25%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L  +PNE+ +               +LQ L L  N +  L +++  L  L +L
Sbjct: 99  LDLSENQLVILPNEIGR-------------LKNLQSLDLYKNKLTTLPKEIGQLQNLQML 145

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
               N+L+ LP  IG+L  L++L++S N +  +P EIG    L +   S NQL  LP+ +
Sbjct: 146 WSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEI 205

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL +     N + +LP+ +     +  LD+  N+LT+L                  
Sbjct: 206 GQLRNLQELNLKWNQLVTLPKGIGRLQNLQTLDLHENRLTIL------------------ 247

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P   G L  L +L+L  NR++ +P  I    +L +  +  N LS    E  ++ 
Sbjct: 248 ------PREFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPLSF--KERKRIQ 299

Query: 254 KLG---TLDLHS----------NQLKEYCVEACQLRLSVLDLS----------------- 283
           KL     LDL            N  +E  ++  +L L   D S                 
Sbjct: 300 KLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVFELSLEYKDFSHLFPKVILKFRNLQSLH 359

Query: 284 --NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
             +     LP EIG++  L+ L L  N L+ +         P+ +  LR       + EA
Sbjct: 360 LYDCGFPTLPKEIGRLKNLKYLTLGLNGLKDI---------PSEIGQLR-------NLEA 403

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                               L+LE   L  +P EI +   + KL L +N ++  P  +  
Sbjct: 404 --------------------LNLEANVLEGLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQ 443

Query: 402 CASLQ 406
             SLQ
Sbjct: 444 LKSLQ 448



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 74/171 (43%), Gaps = 28/171 (16%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           +DC       LP  +GR  NL       N +  +P ++     +  L++E N        
Sbjct: 361 YDCG---FPTLPKEIGRLKNLKYLTLGLNGLKDIPSEIGQLRNLEALNLEAN-------- 409

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                           +L G+P+ IG L  L +L LHQN++   P  I    SL    + 
Sbjct: 410 ----------------VLEGLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLS 453

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            N L  LP E+G+L  L  L+L +NQL     E  QL  L  L+LSNN LS
Sbjct: 454 ANELITLPKEIGQLENLENLNLSNNQLTTLSQEIGQLENLRELNLSNNQLS 504



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 68/128 (53%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N ++ +  ++  L  L  LN+  N L  LP  IG+L  L+ L +  N +  
Sbjct: 377 NLKYLTLGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEIGQLRNLQKLSLHQNKLKI 436

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  IG   +L   D S+N+L  LP  +G+  NL +   SNN +T+L +++     + +L
Sbjct: 437 FPVGIGQLKSLQWLDLSANELITLPKEIGQLENLENLNLSNNQLTTLSQEIGQLENLREL 496

Query: 166 DVEGNKLT 173
           ++  N+L+
Sbjct: 497 NLSNNQLS 504


>gi|424840764|ref|ZP_18265389.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395318962|gb|EJF51883.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 485

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 153/330 (46%), Gaps = 33/330 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L +  +++L E+L  L  L  LN+S N+L ELP +IG+L  LK  D+S N + +
Sbjct: 129 NLQILDLGNCQLQELPEELGQLQNLEALNLSANQLEELPPSIGQLQALKMADLSSNRLQE 188

Query: 106 IPDE-----------------------IGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           +P+E                        G   AL     S NQL +LP+SLG+   L   
Sbjct: 189 LPNEFSQLTQLEELALANNLLSFLPSNFGQLQALKTLQLSENQLDQLPASLGQLKQLELL 248

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
           +  +N +  +P  +     + +LD+  N +  L    I     L  L  ++N L+ +P  
Sbjct: 249 ELQDNDLGQIPAQIGQLQSLVELDLSDNFIQQLPPE-IGQLQALKSLFITENELSQLPPE 307

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
              L  L  L L +N+++++P +      L E  +  N L ALP  + +L KL +L+L +
Sbjct: 308 FAQLKNLQELQLQENKLIALPINFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLGN 367

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           N++  +   AC ++ L  LDL  N +  LP EI ++  L  L+L  N LR L        
Sbjct: 368 NEIYLFPKNACNIKNLLALDLEGNYIEELPEEISQLQNLEFLILYDNELRNL-------- 419

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITM 351
            P L      R  E  D+E  T  E L  M
Sbjct: 420 PPYLQDLTALRRLEISDNEFETFPEVLYQM 449



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 181/361 (50%), Gaps = 24/361 (6%)

Query: 57  IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL 116
           +E+L E++  L  L VL ++   +  LPA+IG+L  L+ LD+    + ++P+E+G    L
Sbjct: 94  LEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQILDLGNCQLQELPEELGQLQNL 153

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
              + S+NQL+ELP S+G+   L     S+N +  LP + +  +++ +L +  N L+ L 
Sbjct: 154 EALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALANNLLSFLP 213

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
           +N       L  L  S+N L+ +P ++G L +L  L+L  N +  IP+ I    SL E  
Sbjct: 214 SN-FGQLQALKTLQLSENQLDQLPASLGQLKQLELLELQDNDLGQIPAQIGQLQSLVELD 272

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIG 295
           + +N +  LP E+G+L  L +L +  N+L +   E  QL+ L  L L  N L  LP   G
Sbjct: 273 LSDNFIQQLPPEIGQLQALKSLFITENELSQLPPEFAQLKNLQELQLQENKLIALPINFG 332

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATR 354
           K++ L +L L+ N L  L  S+        LK L S  L  NE           I +  +
Sbjct: 333 KLSQLEELQLSENKLEALPKSIKR------LKKLSSLNLGNNE-----------IYLFPK 375

Query: 355 LSVTSKE---LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL-QVKFS 410
            +   K    L LEG  +  +P EI +   +  L L  N ++ LPP L    +L +++ S
Sbjct: 376 NACNIKNLLALDLEGNYIEELPEEISQLQNLEFLILYDNELRNLPPYLQDLTALRRLEIS 435

Query: 411 D 411
           D
Sbjct: 436 D 436



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 145/300 (48%), Gaps = 38/300 (12%)

Query: 15  NLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLN 74
           +LS+  L+++PNE             + +   L++L LA+N +  L  +   L  L  L 
Sbjct: 180 DLSSNRLQELPNE-------------FSQLTQLEELALANNLLSFLPSNFGQLQALKTLQ 226

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           +S N+L +LPA++G+L  L+ L++  N + +IP +IG   +LV+ D S N +++LP  +G
Sbjct: 227 LSENQLDQLPASLGQLKQLELLELQDNDLGQIPAQIGQLQSLVELDLSDNFIQQLPPEIG 286

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           +   L     + N ++ LP + A    + +L ++ NKL  L                   
Sbjct: 287 QLQALKSLFITENELSQLPPEFAQLKNLQELQLQENKLIAL------------------- 327

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
                P   G LS+L  L L +N++ ++P SI     L+   +GNN +   P     +  
Sbjct: 328 -----PINFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLGNNEIYLFPKNACNIKN 382

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL  N ++E   E  QL+ L  L L +N L  LPP +  +T LR+L ++ N   T 
Sbjct: 383 LLALDLEGNYIEELPEEISQLQNLEFLILYDNELRNLPPYLQDLTALRRLEISDNEFETF 442



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 141/340 (41%), Gaps = 66/340 (19%)

Query: 84  PAAIGELHMLKSLDV-SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           PA IG+   L+ L +    ++ ++P+EIG    L     +S  +K LP+S+G+  NL   
Sbjct: 74  PAKIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQIL 133

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              N  +  LPE+L     +  L++  N+L  L                        P +
Sbjct: 134 DLGNCQLQELPEELGQLQNLEALNLSANQLEEL------------------------PPS 169

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG L  L   DL  NR+  +P+  S    L E  + NN LS LP+  G+L  L TL L  
Sbjct: 170 IGQLQALKMADLSSNRLQELPNEFSQLTQLEELALANNLLSFLPSNFGQLQALKTLQLSE 229

Query: 263 NQLK-----------------------EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           NQL                        +   +  QL+ L  LDLS+N +  LPPEIG++ 
Sbjct: 230 NQLDQLPASLGQLKQLELLELQDNDLGQIPAQIGQLQSLVELDLSDNFIQQLPPEIGQLQ 289

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
            L+ L +T N L  L       P  A LK L+         E    +  LI +       
Sbjct: 290 ALKSLFITENELSQL------PPEFAQLKNLQ---------ELQLQENKLIALPINFGKL 334

Query: 359 SK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           S+  EL L    L A+P  I    +++ L+L  N I   P
Sbjct: 335 SQLEELQLSENKLEALPKSIKRLKKLSSLNLGNNEIYLFP 374


>gi|350426146|ref|XP_003494347.1| PREDICTED: protein lap1-like isoform 1 [Bombus impatiens]
 gi|350426149|ref|XP_003494348.1| PREDICTED: protein lap1-like isoform 2 [Bombus impatiens]
          Length = 1040

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 182/394 (46%), Gaps = 47/394 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L+N +L DVP +V+            +E   L+KL L  N I+ L   L     L VL
Sbjct: 22  LHLNNCNLYDVPPDVF-----------IYERT-LEKLYLDANRIKDLPRPLFQCHELRVL 69

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N+++ LP AI  L  L+ LD+S NSI ++PD I     L   D S N  +  P ++
Sbjct: 70  SLSDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAI 129

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
              + L +   ++  I  LP +    S +  L++  N L  L  ++ +    L  L    
Sbjct: 130 THIVGLRELYINDAYIEYLPANFGRLSALKTLELRENNLMTLPKSM-SRLINLQRLDIGN 188

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N    +PE +G L  L  L +  N I  +P +I+    L  F    NA+  +P+E+    
Sbjct: 189 NDFTELPEVVGDLINLTELWIDGNDIRRVPLNINQLYRLNHFDCTMNAIHIIPSEVEGWR 248

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +  + L SN++ +     C LR  V L + +N L+ LP +IG+M++L +L++T N L  
Sbjct: 249 DISIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSSLEELIVTKNFLEY 308

Query: 313 LRSSLVNGPTPALLK----------YLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L SS+       LL+          YLR   PE             I   T LS+    L
Sbjct: 309 LPSSI------GLLRKLHCLNVDNNYLRCLPPE-------------IGSCTALSL----L 345

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           SL   NL+ +P E+     +  L+L  N I+ LP
Sbjct: 346 SLRSNNLTRVPPELGHLSSLKVLNLVNNCIKFLP 379



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 126/238 (52%), Gaps = 8/238 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  NN+  L + +  L  L  L++ +N  +ELP  +G+L  L  L +  N I ++
Sbjct: 158 LKTLELRENNLMTLPKSMSRLINLQRLDIGNNDFTELPEVVGDLINLTELWIDGNDIRRV 217

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  I     L  FDC+ N +  +PS +    ++S    S+N I  LP+ L     +  L 
Sbjct: 218 PLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLK 277

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L  L N+ I   + L ELI +KN L  +P +IG L +L  L++  N +  +P  I
Sbjct: 278 VDDNQLNALPND-IGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCLNVDNNYLRCLPPEI 336

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
             C +L+   + +N L+ +P ELG LS L  L+L +N     C++   L +S+L+LSN
Sbjct: 337 GSCTALSLLSLRSNNLTRVPPELGHLSSLKVLNLVNN-----CIKF--LPVSMLNLSN 387


>gi|350417073|ref|XP_003491243.1| PREDICTED: protein lap4-like isoform 1 [Bombus impatiens]
          Length = 2050

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 166/365 (45%), Gaps = 61/365 (16%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D IL+ +R+   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  DDILRYSRSLEELLLDANHIRDLP----KNF---------FRLQKLRKLGLSDNEIHRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP-------------- 107
            D++N   L  L+VS N + ++P  I  L  L+  D S N I ++P              
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGL 136

Query: 108 ---------DEIGSATALVKFDCSSNQLKELPSSL-----------------------GR 135
                     + GS  AL   +   N LK LP SL                       G+
Sbjct: 137 NDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGK 196

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
              L +    +N +  LP ++ +   ++ LDV  N+L  L    I     LT+L  S+N+
Sbjct: 197 LPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEE-IGGLESLTDLHLSQNV 255

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           +  +P+ +G L +L  L + QNR+ ++ S+I  C +L E  +  N L  LP  +GKL  L
Sbjct: 256 IEKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNL 315

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L++  N L+    E   L+ L VL L +N L  LP E+G+ T L  L ++GN L+ L 
Sbjct: 316 NNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLP 375

Query: 315 SSLVN 319
            SL+N
Sbjct: 376 YSLIN 380



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 126/239 (52%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L E L  L  L  L++  N +  LPA IG+L  L+ L +  N +  +
Sbjct: 154 LQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L   D S N+L++LP  +G   +L+D   S N I  LP+ L +  K++ L 
Sbjct: 214 PPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L+ L++N I     L ELI ++N L  +P TIG L  L  L++ +N + S+P+ I
Sbjct: 274 VDQNRLSTLNSN-IGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
                L    + +N L  LP E+G+ + L  LD+  N+L+        L L  + LS N
Sbjct: 333 GNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAVWLSKN 391



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 112/262 (42%), Gaps = 38/262 (14%)

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N I  LP++     K+ KL +  N++  L  + I ++  L EL  S+N +  +PE I +L
Sbjct: 47  NHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPD-IQNFENLVELDVSRNDIPDIPENIKNL 105

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L   D   N I  +P+      +L    + + +L+ LP + G L  L +L+L  N LK
Sbjct: 106 RALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLK 165

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
                  QL +L  LDL +N +  LP  IGK+  L++L L  N L+ L   +    T A 
Sbjct: 166 SLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGELKTLAC 225

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           L    +RL            EDL                        P EI     +T L
Sbjct: 226 LDVSENRL------------EDL------------------------PEEIGGLESLTDL 249

Query: 386 DLSRNSIQELPPELSSCASLQV 407
            LS+N I++LP  L     L +
Sbjct: 250 HLSQNVIEKLPDGLGELQKLTI 271


>gi|449678559|ref|XP_002158634.2| PREDICTED: leucine-rich repeat protein soc-2 homolog [Hydra
           magnipapillata]
          Length = 499

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 181/387 (46%), Gaps = 44/387 (11%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           +  V L++L+L  N +  ++ ++ NL  LT+L++  N+L  +P  IG L  L +LD++ N
Sbjct: 102 YSLVSLKQLLLRFNRLTTVEPEIGNLTHLTMLSLRENRLKHIPDTIGNLKSLVTLDLAKN 161

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P EIG    +   D + N+L++LP S+G+   LS      N +TSLP  +  C+ 
Sbjct: 162 HLESLPPEIGKCIEMNTLDLAHNELRDLPDSIGKLTALSRLGLRYNQLTSLPSSICQCTL 221

Query: 162 MSKLDVEGNKL----------------TVLSNNLI--------ASWTMLTELIASKNLLN 197
           + ++++E N +                  LS N            +  +T L+   N + 
Sbjct: 222 LQEINIESNGISSLPSGLLLSSKLCDSITLSRNEFENFPSDGPKQFASVTSLVFDHNKIK 281

Query: 198 GMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
            +P  I S ++ L +L+L  N I  +P       +L E  +G N L+ LP ++  L  L 
Sbjct: 282 KIPFGIFSKAQFLTKLNLKDNLIAELPLDFGTWANLDELNLGTNQLTVLPDDIKWLVNLE 341

Query: 257 TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
            L L +NQLK        LR L VLDL  N+L  LP EI  + +L KLLL  N L TL  
Sbjct: 342 VLILSNNQLKRIPRSIGNLRKLRVLDLDENNLECLPNEIEYLKSLEKLLLQSNKLTTL-- 399

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSL-EGMNLSAI 372
                  PA + +L+        S  S  + DL  +   +      ++L L +  NL A+
Sbjct: 400 -------PATIGHLKKL------SYLSVGENDLTVLPPEIGALESLEQLFLNDNKNLHAL 446

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPEL 399
           P  +     +T +++    +  LP E+
Sbjct: 447 PHTLVLCQNLTIMNIDACPLSSLPQEI 473



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 172/386 (44%), Gaps = 96/386 (24%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+L+   L  +P E+ K              +++  L LAHN +  L + +  L  L+ 
Sbjct: 155 TLDLAKNHLESLPPEIGK-------------CIEMNTLDLAHNELRDLPDSIGKLTALSR 201

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI-------------------------- 106
           L + +N+L+ LP++I +  +L+ +++  N I  +                          
Sbjct: 202 LGLRYNQLTSLPSSICQCTLLQEINIESNGISSLPSGLLLSSKLCDSITLSRNEFENFPS 261

Query: 107 --PDEIGSATALVKFDCSSNQLKELPSSL-GRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             P +  S T+LV FD   N++K++P  +  +   L+     +N I  LP D    + + 
Sbjct: 262 DGPKQFASVTSLV-FD--HNKIKKIPFGIFSKAQFLTKLNLKDNLIAELPLDFGTWANLD 318

Query: 164 KLDVEGNKLTVLSNNLIASWTM-LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           +L++  N+LTVL +++   W + L  LI S N L  +P +IG+L +L  LDL +N +  +
Sbjct: 319 ELNLGTNQLTVLPDDI--KWLVNLEVLILSNNQLKRIPRSIGNLRKLRVLDLDENNLECL 376

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL 282
           P+ I    SL +  + +N L+ LPA +G L KL                      S L +
Sbjct: 377 PNEIEYLKSLEKLLLQSNKLTTLPATIGHLKKL----------------------SYLSV 414

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGN------------------------PLRTLRSSLV 318
             N L+ LPPEIG + +L +L L  N                        PL +L   +V
Sbjct: 415 GENDLTVLPPEIGALESLEQLFLNDNKNLHALPHTLVLCQNLTIMNIDACPLSSLPQEIV 474

Query: 319 -NGPTPALLKYLRSRLPENEDSEAST 343
            NGP+  +++YLR   P N ++   T
Sbjct: 475 ANGPS-VVIQYLRFEGPYNGNNTLPT 499



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 172/406 (42%), Gaps = 89/406 (21%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N+I  L  ++ N   L +L++ HNK+ E+P  +  L  LK L + FN +  +  EIG+ T
Sbjct: 69  NSISSLPAEIVNCKKLQMLDLRHNKIKEIPPVLYSLVSLKQLLLRFNRLTTVEPEIGNLT 128

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L       N+LK +P ++G   +L     + N + SLP ++  C +M+ LD+  N+   
Sbjct: 129 HLTMLSLRENRLKHIPDTIGNLKSLVTLDLAKNHLESLPPEIGKCIEMNTLDLAHNE--- 185

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
                                L  +P++IG L+ L RL L  N++ S+PSSI  C  L E
Sbjct: 186 ---------------------LRDLPDSIGKLTALSRLGLRYNQLTSLPSSICQCTLLQE 224

Query: 235 FYMGNNALSA------------------------LPAE---------------------- 248
             + +N +S+                         P++                      
Sbjct: 225 INIESNGISSLPSGLLLSSKLCDSITLSRNEFENFPSDGPKQFASVTSLVFDHNKIKKIP 284

Query: 249 LGKLSK---LGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
            G  SK   L  L+L  N + E  ++      L  L+L  N L+ LP +I  +  L  L+
Sbjct: 285 FGIFSKAQFLTKLNLKDNLIAELPLDFGTWANLDELNLGTNQLTVLPDDIKWLVNLEVLI 344

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELS 363
           L+ N L+ +  S+ N      L+ LR   L EN         E L ++        ++L 
Sbjct: 345 LSNNQLKRIPRSIGN------LRKLRVLDLDENNLECLPNEIEYLKSL--------EKLL 390

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           L+   L+ +P+ I    +++ L +  N +  LPPE+ +  SL+  F
Sbjct: 391 LQSNKLTTLPATIGHLKKLSYLSVGENDLTVLPPEIGALESLEQLF 436



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 140/305 (45%), Gaps = 36/305 (11%)

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           T L +     N++ +LP  +G  +NL     + N I+SLP ++ +C K+  LD+  NK+ 
Sbjct: 36  TGLTQLFLYGNKISKLPPEIGLLVNLETLLLNENSISSLPAEIVNCKKLQMLDLRHNKIK 95

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            +   ++ S   L +L+   N L  +   IG+L+ L  L L +NR+  IP +I    SL 
Sbjct: 96  EIP-PVLYSLVSLKQLLLRFNRLTTVEPEIGNLTHLTMLSLRENRLKHIPDTIGNLKSLV 154

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPE 293
              +  N L +LP E+GK                 C+E     ++ LDL++N L  LP  
Sbjct: 155 TLDLAKNHLESLPPEIGK-----------------CIE-----MNTLDLAHNELRDLPDS 192

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLV------------NGPTPALLKYLRSRLPENEDSEA 341
           IGK+T L +L L  N L +L SS+             NG +      L S    +  + +
Sbjct: 193 IGKLTALSRLGLRYNQLTSLPSSICQCTLLQEINIESNGISSLPSGLLLSSKLCDSITLS 252

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW-EAGEITKLDLSRNSIQELPPELS 400
               E+  +   +   +   L  +   +  IP  I+ +A  +TKL+L  N I ELP +  
Sbjct: 253 RNEFENFPSDGPKQFASVTSLVFDHNKIKKIPFGIFSKAQFLTKLNLKDNLIAELPLDFG 312

Query: 401 SCASL 405
           + A+L
Sbjct: 313 TWANL 317



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 26/206 (12%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LT L +  NK+S+LP  IG L  L++L ++ NSI  +P EI +   L   D   N++KE+
Sbjct: 38  LTQLFLYGNKISKLPPEIGLLVNLETLLLNENSISSLPAEIVNCKKLQMLDLRHNKIKEI 97

Query: 130 PSSLGRCLNLSDFKASNNCITSL-PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           P  L   ++L       N +T++ PE                         I + T LT 
Sbjct: 98  PPVLYSLVSLKQLLLRFNRLTTVEPE-------------------------IGNLTHLTM 132

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L   +N L  +P+TIG+L  L+ LDL +N + S+P  I  C  +    + +N L  LP  
Sbjct: 133 LSLRENRLKHIPDTIGNLKSLVTLDLAKNHLESLPPEIGKCIEMNTLDLAHNELRDLPDS 192

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQ 274
           +GKL+ L  L L  NQL       CQ
Sbjct: 193 IGKLTALSRLGLRYNQLTSLPSSICQ 218



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 39/224 (17%)

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            L+ L +L L+ N+I  +P  I    +L    +  N++S+LPAE+    KL  LDL  N+
Sbjct: 34  GLTGLTQLFLYGNKISKLPPEIGLLVNLETLLLNENSISSLPAEIVNCKKLQMLDLRHNK 93

Query: 265 LKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
           +KE                      +PP +  + +L++LLL  N L T+   + N     
Sbjct: 94  IKE----------------------IPPVLYSLVSLKQLLLRFNRLTTVEPEIGNLTHLT 131

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           +L    +RL    D     T  +L ++ T        L L   +L ++P EI +  E+  
Sbjct: 132 MLSLRENRLKHIPD-----TIGNLKSLVT--------LDLAKNHLESLPPEIGKCIEMNT 178

Query: 385 LDLSRNSIQELPP---ELSSCASLQVKFSDLVTNKESCISGCYL 425
           LDL+ N +++LP    +L++ + L ++++ L T+  S I  C L
Sbjct: 179 LDLAHNELRDLPDSIGKLTALSRLGLRYNQL-TSLPSSICQCTL 221


>gi|350417077|ref|XP_003491245.1| PREDICTED: protein lap4-like isoform 3 [Bombus impatiens]
          Length = 1835

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 166/365 (45%), Gaps = 61/365 (16%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D IL+ +R+   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  DDILRYSRSLEELLLDANHIRDLP----KNF---------FRLQKLRKLGLSDNEIHRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP-------------- 107
            D++N   L  L+VS N + ++P  I  L  L+  D S N I ++P              
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGL 136

Query: 108 ---------DEIGSATALVKFDCSSNQLKELPSSL-----------------------GR 135
                     + GS  AL   +   N LK LP SL                       G+
Sbjct: 137 NDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGK 196

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
              L +    +N +  LP ++ +   ++ LDV  N+L  L    I     LT+L  S+N+
Sbjct: 197 LPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEE-IGGLESLTDLHLSQNV 255

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           +  +P+ +G L +L  L + QNR+ ++ S+I  C +L E  +  N L  LP  +GKL  L
Sbjct: 256 IEKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNL 315

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L++  N L+    E   L+ L VL L +N L  LP E+G+ T L  L ++GN L+ L 
Sbjct: 316 NNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLP 375

Query: 315 SSLVN 319
            SL+N
Sbjct: 376 YSLIN 380



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 126/239 (52%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L E L  L  L  L++  N +  LPA IG+L  L+ L +  N +  +
Sbjct: 154 LQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L   D S N+L++LP  +G   +L+D   S N I  LP+ L +  K++ L 
Sbjct: 214 PPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L+ L++N I     L ELI ++N L  +P TIG L  L  L++ +N + S+P+ I
Sbjct: 274 VDQNRLSTLNSN-IGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
                L    + +N L  LP E+G+ + L  LD+  N+L+        L L  + LS N
Sbjct: 333 GNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAVWLSKN 391



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 112/262 (42%), Gaps = 38/262 (14%)

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N I  LP++     K+ KL +  N++  L  + I ++  L EL  S+N +  +PE I +L
Sbjct: 47  NHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPD-IQNFENLVELDVSRNDIPDIPENIKNL 105

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L   D   N I  +P+      +L    + + +L+ LP + G L  L +L+L  N LK
Sbjct: 106 RALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLK 165

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
                  QL +L  LDL +N +  LP  IGK+  L++L L  N L+ L   +    T A 
Sbjct: 166 SLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGELKTLAC 225

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           L    +RL            EDL                        P EI     +T L
Sbjct: 226 LDVSENRL------------EDL------------------------PEEIGGLESLTDL 249

Query: 386 DLSRNSIQELPPELSSCASLQV 407
            LS+N I++LP  L     L +
Sbjct: 250 HLSQNVIEKLPDGLGELQKLTI 271


>gi|255074191|ref|XP_002500770.1| predicted protein [Micromonas sp. RCC299]
 gi|226516033|gb|ACO62028.1| predicted protein [Micromonas sp. RCC299]
          Length = 256

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 134/255 (52%), Gaps = 16/255 (6%)

Query: 30  KNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGE 89
           +  DE  +GD+           LA N +  +  ++ +L  L  L ++HN+L+ +PA IG 
Sbjct: 3   RRTDELADGDRAAH--------LAENQLTSVPAEIGHLTSLERLELNHNELTRVPAEIGL 54

Query: 90  LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI 149
           L  L++L +S N +  +P EIG  T+L       N L  +P+ +G+  +L      +N +
Sbjct: 55  LTSLRALSLSSNKLTSVPVEIGQLTSLTALFLGDNLLTRVPAEVGQLASLEGLFLGDNRL 114

Query: 150 TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           TS+  ++   + +++L +  N+LT L    I   T LT L+   N L  +P  IG L+ L
Sbjct: 115 TSVLAEIGQLTSLTELSLGNNQLTSLPAE-IGRLTSLTALLLYDNQLTSVPAEIGQLTSL 173

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL---- 265
           ++L L +N++ S+P+ I    SL E Y+  N L+++PAE+G+L+ L  L L  N+L    
Sbjct: 174 VKLSLTENQLTSLPAEIGQLTSLTELYLYGNQLTSVPAEIGQLTSLVRLYLGDNRLTSVP 233

Query: 266 ---KEYCVEACQLRL 277
              +E     C +R+
Sbjct: 234 AAIRELRAAGCNVRM 248



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 132/267 (49%), Gaps = 19/267 (7%)

Query: 154 EDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLD 213
           ++LAD  + + L    N+LT +    I   T L  L  + N L  +P  IG L+ L  L 
Sbjct: 6   DELADGDRAAHL--AENQLTSVPAE-IGHLTSLERLELNHNELTRVPAEIGLLTSLRALS 62

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L  N++ S+P  I    SL   ++G+N L+ +PAE+G+L+ L  L L  N+L     E  
Sbjct: 63  LSSNKLTSVPVEIGQLTSLTALFLGDNLLTRVPAEVGQLASLEGLFLGDNRLTSVLAEIG 122

Query: 274 QLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
           QL  L+ L L NN L+ LP EIG++T+L  LLL  N L ++ + +  G   +L+K     
Sbjct: 123 QLTSLTELSLGNNQLTSLPAEIGRLTSLTALLLYDNQLTSVPAEI--GQLTSLVKL---S 177

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
           L EN+ +        L ++         EL L G  L+++P+EI +   + +L L  N +
Sbjct: 178 LTENQLTSLPAEIGQLTSL--------TELYLYGNQLTSVPAEIGQLTSLVRLYLGDNRL 229

Query: 393 QELPPELSS--CASLQVKFSDLVTNKE 417
             +P  +     A   V+  + VT  E
Sbjct: 230 TSVPAAIRELRAAGCNVRMDNGVTVDE 256



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 10/171 (5%)

Query: 13  SLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           +L+LS+  L  VP E+ +  +      GD     V         L+ L L  N +  +  
Sbjct: 60  ALSLSSNKLTSVPVEIGQLTSLTALFLGDNLLTRVPAEVGQLASLEGLFLGDNRLTSVLA 119

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  LT L++ +N+L+ LPA IG L  L +L +  N +  +P EIG  T+LVK   +
Sbjct: 120 EIGQLTSLTELSLGNNQLTSLPAEIGRLTSLTALLLYDNQLTSVPAEIGQLTSLVKLSLT 179

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            NQL  LP+ +G+  +L++     N +TS+P ++   + + +L +  N+LT
Sbjct: 180 ENQLTSLPAEIGQLTSLTELYLYGNQLTSVPAEIGQLTSLVRLYLGDNRLT 230


>gi|427737941|ref|YP_007057485.1| hypothetical protein Riv7116_4517 [Rivularia sp. PCC 7116]
 gi|427372982|gb|AFY56938.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 868

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 150/330 (45%), Gaps = 60/330 (18%)

Query: 7   AARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRN 66
           AA     L+LS   L  +P E+              +  +LQ L L++N +  L E+   
Sbjct: 14  AAEGWTELDLSGNELTALPPEI-------------GQLTNLQYLHLSYNQLSSLPEEFGQ 60

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L  L  L +  N+LS LPA IG+L  L+ L +  N +  +P+EIG  T L     + NQL
Sbjct: 61  LTNLQFLYLLENQLSTLPAEIGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQL 120

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
             LP+  G+   L  F    N ++SLPE++   + +  L +  N+L+ L           
Sbjct: 121 STLPAEFGQLRKLQCFYLRRNQLSSLPEEIGQLTNLQSLYLNENQLSTL----------- 169

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                        P  IG LS L  L L  N++ S+P  I    +L   ++  N LS+LP
Sbjct: 170 -------------PPEIGQLSNLQYLHLSYNQLSSLPPEIGQLSNLQYLHLSYNQLSSLP 216

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKM-TTLRKLLL 305
            E+G+L+ L +L L  NQ                      LS LPPEIG++ + L +L L
Sbjct: 217 EEIGQLTNLQSLYLRYNQ----------------------LSSLPPEIGRLHSHLTELTL 254

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            GNPL +L + +    +  +L + + +L +
Sbjct: 255 DGNPLESLPAEIRGKISQVILNFYKQKLEQ 284



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 138/294 (46%), Gaps = 39/294 (13%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           LD+S N +  +P EIG  T L     S NQL  LP   G+  NL       N +++LP +
Sbjct: 21  LDLSGNELTALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQLTNLQFLYLLENQLSTLPAE 80

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           +    K+  L +  N+L++L    I   T L  L  ++N L+ +P   G L +L    L 
Sbjct: 81  IGQLRKLQCLYLRRNQLSILPEE-IGQLTNLQSLYLNENQLSTLPAEFGQLRKLQCFYLR 139

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N++ S+P  I    +L   Y+  N LS LP E+G+LS L  L L  NQL     E  QL
Sbjct: 140 RNQLSSLPEEIGQLTNLQSLYLNENQLSTLPPEIGQLSNLQYLHLSYNQLSSLPPEIGQL 199

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             L  L LS N LS LP EIG++T L+ L L  N L +L         P  +  L S L 
Sbjct: 200 SNLQYLHLSYNQLSSLPEEIGQLTNLQSLYLRYNQLSSL---------PPEIGRLHSHLT 250

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
           E                          L+L+G  L ++P+EI   G+I+++ L+
Sbjct: 251 E--------------------------LTLDGNPLESLPAEI--RGKISQVILN 276



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 118/249 (47%), Gaps = 15/249 (6%)

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
           A     ++LD+ GN+LT L    I   T L  L  S N L+ +PE  G L+ L  L L +
Sbjct: 13  AAAEGWTELDLSGNELTALPPE-IGQLTNLQYLHLSYNQLSSLPEEFGQLTNLQFLYLLE 71

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
           N++ ++P+ I     L   Y+  N LS LP E+G+L+ L +L L+ NQL     E  QLR
Sbjct: 72  NQLSTLPAEIGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLSTLPAEFGQLR 131

Query: 277 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L    L  N LS LP EIG++T L+ L L  N L TL   +        L+YL   L  
Sbjct: 132 KLQCFYLRRNQLSSLPEEIGQLTNLQSLYLNENQLSTLPPEIGQLSN---LQYL--HLSY 186

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
           N+ S        L  +        + L L    LS++P EI +   +  L L  N +  L
Sbjct: 187 NQLSSLPPEIGQLSNL--------QYLHLSYNQLSSLPEEIGQLTNLQSLYLRYNQLSSL 238

Query: 396 PPELSSCAS 404
           PPE+    S
Sbjct: 239 PPEIGRLHS 247



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/237 (32%), Positives = 100/237 (42%), Gaps = 40/237 (16%)

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L V+       WT   EL  S N L  +P  IG L+ L  L L  N++ S+P       +
Sbjct: 7   LQVIEQAAAEGWT---ELDLSGNELTALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQLTN 63

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L   Y+  N LS LPAE+G+L KL  L L  NQL     E  QL  L  L L+ N LS L
Sbjct: 64  LQFLYLLENQLSTLPAEIGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLSTL 123

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P E G++  L+   L  N L                    S LPE             I 
Sbjct: 124 PAEFGQLRKLQCFYLRRNQL--------------------SSLPEE------------IG 151

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             T L    + L L    LS +P EI +   +  L LS N +  LPPE+   ++LQ 
Sbjct: 152 QLTNL----QSLYLNENQLSTLPPEIGQLSNLQYLHLSYNQLSSLPPEIGQLSNLQY 204



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 12/204 (5%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +  +LQ L L  N +  L  +   L  L    +  N+LS LP  IG+L  L+SL ++ N 
Sbjct: 106 QLTNLQSLYLNENQLSTLPAEFGQLRKLQCFYLRRNQLSSLPEEIGQLTNLQSLYLNENQ 165

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P EIG  + L     S NQL  LP  +G+  NL     S N ++SLPE++   + +
Sbjct: 166 LSTLPPEIGQLSNLQYLHLSYNQLSSLPPEIGQLSNLQYLHLSYNQLSSLPEEIGQLTNL 225

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-GSLSRLI------RLD-- 213
             L +  N+L+ L   +    + LTEL    N L  +P  I G +S++I      +L+  
Sbjct: 226 QSLYLRYNQLSSLPPEIGRLHSHLTELTLDGNPLESLPAEIRGKISQVILNFYKQKLEQT 285

Query: 214 ---LHQNRILSIPSSISGCCSLAE 234
              L++ ++L I    +G  SLA+
Sbjct: 286 INRLYEAKLLIIGEGGAGKTSLAK 309


>gi|281341441|gb|EFB17025.1| hypothetical protein PANDA_011098 [Ailuropoda melanoleuca]
          Length = 1599

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 168/363 (46%), Gaps = 61/363 (16%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I + +R+   L L    LR++P   ++              ++L+KL L+ N I++L  +
Sbjct: 1   IYRYSRSLEELLLDANQLRELPKPFFR-------------LLNLRKLGLSDNEIQRLPPE 47

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + N   L  L+VS N + E+P +I     L+  D S N + ++P+      +L     + 
Sbjct: 48  VANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALND 107

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA-- 181
             L+ LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN+L VL + L A  
Sbjct: 108 VSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALP 167

Query: 182 ------------------------------SWTMLTELIA-------------SKNLLNG 198
                                         S   L EL A             S+NLL  
Sbjct: 168 NLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLLLLTDLLLSQNLLQR 227

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P+ IG L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L
Sbjct: 228 LPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELVLTENLLTALPRSLGKLTKLTNL 287

Query: 259 DLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           ++  N+L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +
Sbjct: 288 NVDRNRLEVLPPEIGGC-VALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPFA 346

Query: 317 LVN 319
           L +
Sbjct: 347 LTH 349



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 160/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 16  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 75

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LPE       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 76  ALEIADF--SGNPLSRLPEGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 132

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 133 LKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 192

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 193 VCLDVSENRLEELPAELGGLLLLTDLLLSQNLLQRLPDGIGQLKQL-------------- 238

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 239 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELVLTENLLTALPR 276

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 277 SLGKLTKLTNLNVDRNRLEVLPPEIGGCVALSV 309



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N +E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 144 VKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 203

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 204 ELPAELGGLLLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 262

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  EL+ ++NLL  +P ++G L++L  L++ +NR+  +P 
Sbjct: 263 -----------------------ELVLTENLLTALPRSLGKLTKLTNLNVDRNRLEVLPP 299

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 300 EIGGCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 359

Query: 285 N 285
           N
Sbjct: 360 N 360


>gi|218248723|ref|YP_002374094.1| small GTP-binding protein [Cyanothece sp. PCC 8801]
 gi|218169201|gb|ACK67938.1| small GTP-binding protein [Cyanothece sp. PCC 8801]
          Length = 937

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 141/273 (51%), Gaps = 2/273 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L +N ++ L  ++  L  L  L ++ N L ELP  IG L  L  L ++ N +  +
Sbjct: 44  LKFLDLRNNKLKTLPPEIGTLQSLNALFLTTNYLEELPPEIGNLSTLHRLSLTENKLSHL 103

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P E G+   L +   ++NQL  LP+  GR +NL     SNN +T LPE+  +  K+S LD
Sbjct: 104 PQEFGNLIGLTELYLANNQLNSLPTEFGRLINLERLSLSNNQLTLLPEEFGNLKKLSWLD 163

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ NKL  L N  I     L++L  S N L  +P  I  +  LI L+   N++  +P  +
Sbjct: 164 LKSNKLESL-NPEIRDLKQLSKLNISYNQLTNLPPQISEVESLIELNASYNQLTILPGEL 222

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               +L    + +N +  LP E+G+L  L TL+L  N L     +  +L +L  L LS+N
Sbjct: 223 GELSNLDLLNLSHNKIEKLPREIGQLKNLNTLNLIYNNLYYLPSQIGELSQLIDLRLSHN 282

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L  +P EI K+  L  L L  N L+ L + ++
Sbjct: 283 YLDNIPSEIEKLRKLTTLYLGYNKLKILPTGII 315



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 145/318 (45%), Gaps = 45/318 (14%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKF-DCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +++LD++F  +  +P EIG     +KF D  +N+LK LP  +G   +L+    + N +  
Sbjct: 20  VETLDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGTLQSLNALFLTTNYLEE 79

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSN---NLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           LP ++ + S + +L +  NKL+ L     NLI     LTEL  + N LN +P   G L  
Sbjct: 80  LPPEIGNLSTLHRLSLTENKLSHLPQEFGNLIG----LTELYLANNQLNSLPTEFGRLIN 135

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RL L                        NN L+ LP E G L KL  LDL SN+L+  
Sbjct: 136 LERLSL-----------------------SNNQLTLLPEEFGNLKKLSWLDLKSNKLESL 172

Query: 269 CVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
             E   L+ LS L++S N L+ LPP+I ++ +L +L  + N L  L   L       LL 
Sbjct: 173 NPEIRDLKQLSKLNISYNQLTNLPPQISEVESLIELNASYNQLTILPGELGELSNLDLLN 232

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              +++ E    E    K                L+L   NL  +PS+I E  ++  L L
Sbjct: 233 LSHNKI-EKLPREIGQLK------------NLNTLNLIYNNLYYLPSQIGELSQLIDLRL 279

Query: 388 SRNSIQELPPELSSCASL 405
           S N +  +P E+     L
Sbjct: 280 SHNYLDNIPSEIEKLRKL 297



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 117/250 (46%), Gaps = 44/250 (17%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L L++N +  L E+  NL  L+ L++  NKL  L   I +L  L  L++S+N + 
Sbjct: 134 INLERLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPEIRDLKQLSKLNISYNQLT 193

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P +I    +L++ + S NQL  LP  LG   NL     S+N I  LP ++     +  
Sbjct: 194 NLPPQISEVESLIELNASYNQLTILPGELGELSNLDLLNLSHNKIEKLPREIGQLKNL-- 251

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                N L ++ NNL                   +P  IG LS+LI L L  N + +IPS
Sbjct: 252 -----NTLNLIYNNLYY-----------------LPSQIGELSQLIDLRLSHNYLDNIPS 289

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I     L   Y+G N L  LP  + +L + G                   +L++LDL  
Sbjct: 290 EIEKLRKLTTLYLGYNKLKILPTGIIQLVRFG-------------------QLTILDLKE 330

Query: 285 NSLSGLPPEI 294
           N LS +PPEI
Sbjct: 331 NLLS-IPPEI 339



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 109/252 (43%), Gaps = 18/252 (7%)

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
           A  +K+  LD+   +LT L   +      L  L    N L  +P  IG+L  L  L L  
Sbjct: 15  AARNKVETLDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGTLQSLNALFLTT 74

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL- 275
           N +  +P  I    +L    +  N LS LP E G L  L  L L +NQL     E  +L 
Sbjct: 75  NYLEELPPEIGNLSTLHRLSLTENKLSHLPQEFGNLIGLTELYLANNQLNSLPTEFGRLI 134

Query: 276 RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L  L LSNN L+ LP E G +  L  L L  N L +L       P    LK L      
Sbjct: 135 NLERLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESL------NPEIRDLKQL------ 182

Query: 336 NEDSEASTTKEDLITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
              S+ + +   L  +  ++S      EL+     L+ +P E+ E   +  L+LS N I+
Sbjct: 183 ---SKLNISYNQLTNLPPQISEVESLIELNASYNQLTILPGELGELSNLDLLNLSHNKIE 239

Query: 394 ELPPELSSCASL 405
           +LP E+    +L
Sbjct: 240 KLPREIGQLKNL 251



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 16/138 (11%)

Query: 271 EACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL-LTGNPLRTLRSSLVNGPTPALLKYL 329
           EA + ++  LDL+   L+ LPPEIG++    K L L  N L+TL       P    L+ L
Sbjct: 14  EAARNKVETLDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTL------PPEIGTLQSL 67

Query: 330 RS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
            +  L  N   E      +L T+  RLS+T  +       LS +P E      +T+L L+
Sbjct: 68  NALFLTTNYLEELPPEIGNLSTLH-RLSLTENK-------LSHLPQEFGNLIGLTELYLA 119

Query: 389 RNSIQELPPELSSCASLQ 406
            N +  LP E     +L+
Sbjct: 120 NNQLNSLPTEFGRLINLE 137


>gi|326519689|dbj|BAK00217.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 569

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 128/260 (49%), Gaps = 4/260 (1%)

Query: 56  NIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
            IE + + +  L  L  L++S N+L  LP  IG+L  L  LD+  N I ++PD +G   +
Sbjct: 251 QIEWIPDSIGKLTGLVTLDISENRLVALPPTIGKLSSLTKLDLHANRIAQLPDSVGDLRS 310

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L+  D   NQL  LPSS+GR  NL +     N I +LP+ +   +++ KL VE N L  L
Sbjct: 311 LICLDLRGNQLTSLPSSIGRLANLEELDVGANHIVALPDSVGSLTRLKKLLVETNDLDEL 370

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
               I     L EL A  N L  +PE +G L  L  L +  N I S+P++++    L E 
Sbjct: 371 PYT-IGHCVSLVELQAGYNHLKALPEAVGKLESLEILSVRYNNIRSLPTTMASLTKLKEV 429

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSN--QLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
               N L ++P     ++ L  L++ +N   +K        L  L  LD+SNN +  LP 
Sbjct: 430 DASFNELESIPENFCFVTSLIKLNVGNNFADMKSLPRSIGNLEMLEELDISNNQIRVLPD 489

Query: 293 EIGKMTTLRKLLLTGNPLRT 312
             G +  LR L    NPL+ 
Sbjct: 490 SFGMLQHLRVLRAEENPLQV 509



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 117/222 (52%), Gaps = 3/222 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L KL L  N I +L + + +L  L  L++  N+L+ LP++IG L  L+ LDV  N I+ +
Sbjct: 288 LTKLDLHANRIAQLPDSVGDLRSLICLDLRGNQLTSLPSSIGRLANLEELDVGANHIVAL 347

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +GS T L K    +N L ELP ++G C++L + +A  N + +LPE +     +  L 
Sbjct: 348 PDSVGSLTRLKKLLVETNDLDELPYTIGHCVSLVELQAGYNHLKALPEAVGKLESLEILS 407

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN--RILSIPS 224
           V  N +  L   + AS T L E+ AS N L  +PE    ++ LI+L++  N   + S+P 
Sbjct: 408 VRYNNIRSLPTTM-ASLTKLKEVDASFNELESIPENFCFVTSLIKLNVGNNFADMKSLPR 466

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           SI     L E  + NN +  LP   G L  L  L    N L+
Sbjct: 467 SIGNLEMLEELDISNNQIRVLPDSFGMLQHLRVLRAEENPLQ 508



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 132/304 (43%), Gaps = 61/304 (20%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           IPD IG  T LV  D S N+L  LP ++G+                        S ++KL
Sbjct: 255 IPDSIGKLTGLVTLDISENRLVALPPTIGKL-----------------------SSLTKL 291

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N++  L                        P+++G L  LI LDL  N++ S+PSS
Sbjct: 292 DLHANRIAQL------------------------PDSVGDLRSLICLDLRGNQLTSLPSS 327

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE--YCVEACQLRLSVLDLS 283
           I    +L E  +G N + ALP  +G L++L  L + +N L E  Y +  C + L  L   
Sbjct: 328 IGRLANLEELDVGANHIVALPDSVGSLTRLKKLLVETNDLDELPYTIGHC-VSLVELQAG 386

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L  LP  +GK+ +L  L +  N +R+L +++      A L  L+       + E+  
Sbjct: 387 YNHLKALPEAVGKLESLEILSVRYNNIRSLPTTM------ASLTKLKEVDASFNELESIP 440

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
                +T   +L+V +        ++ ++P  I     + +LD+S N I+ LP       
Sbjct: 441 ENFCFVTSLIKLNVGNN-----FADMKSLPRSIGNLEMLEELDISNNQIRVLPDSFGMLQ 495

Query: 404 SLQV 407
            L+V
Sbjct: 496 HLRV 499



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 3/185 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L++L +  N+I  L + + +L  L  L V  N L ELP  IG    L  L   +N + 
Sbjct: 332 ANLEELDVGANHIVALPDSVGSLTRLKKLLVETNDLDELPYTIGHCVSLVELQAGYNHLK 391

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+ +G   +L       N ++ LP+++     L +  AS N + S+PE+    + + K
Sbjct: 392 ALPEAVGKLESLEILSVRYNNIRSLPTTMASLTKLKEVDASFNELESIPENFCFVTSLIK 451

Query: 165 LDVEGNKLTVLSN--NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           L+V GN    + +    I +  ML EL  S N +  +P++ G L  L  L   +N +   
Sbjct: 452 LNV-GNNFADMKSLPRSIGNLEMLEELDISNNQIRVLPDSFGMLQHLRVLRAEENPLQVP 510

Query: 223 PSSIS 227
           P  I+
Sbjct: 511 PREIA 515


>gi|122937315|ref|NP_001073929.1| leucine-rich repeat and IQ domain-containing protein 4 [Homo
           sapiens]
 gi|187661973|sp|A6NIV6.2|LRIQ4_HUMAN RecName: Full=Leucine-rich repeat and IQ domain-containing protein
           4; AltName: Full=Leucine-rich repeat-containing protein
           64
          Length = 560

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 182/396 (45%), Gaps = 36/396 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L    L+++P  ++KN               L+ L L  N+++ L +++ N   L  +
Sbjct: 123 LRLYQTDLKEIPVVIFKNLHH------------LELLGLTGNHLKCLPKEIVNQTKLREI 170

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+    P  +  L+ L+ +D+  N I  IP+EIG  T L KF  +SN L  LP+SL
Sbjct: 171 YLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASL 230

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +C  LS    S+N + S+P+  A+  KM+++ + GN+L  +   LI  WT L  L    
Sbjct: 231 CQCSQLSVLDLSHNLLHSIPKSFAELRKMTEIGLSGNRLEKVP-RLICRWTSLHLLYLGN 289

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
             L+ +  +   L  L  LDL QN +   P  I    +L    + +N +  LP+ELG LS
Sbjct: 290 TGLHRLRGSFRCLVNLRFLDLSQNHLHHCPLQICALKNLEVLGLDDNKIGQLPSELGSLS 349

Query: 254 KLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           KL  L L  N+   +  E   L    +L +       L+ +P  I K+ +L++L +  N 
Sbjct: 350 KLKILGLTGNEFLSFPEEVLSLASLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNH 409

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE--DLITMATRLSVTSKELSLEGM 367
           L  L  SL + P   +L           D   +  K+  D I  A  L    KEL LE  
Sbjct: 410 LEYLPVSLGSMPNLEVL-----------DCRHNLLKQLPDAICQAQAL----KELRLEDN 454

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            L+ +P  +     +  L L  N ++E P E+  CA
Sbjct: 455 LLTHLPENLDSLVNLKVLTLMDNPMEEPPKEV--CA 488



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 150/339 (44%), Gaps = 13/339 (3%)

Query: 70  LTVLNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           L  L +    L E+P  I + LH L+ L ++ N +  +P EI + T L +     NQ + 
Sbjct: 120 LRELRLYQTDLKEIPVVIFKNLHHLELLGLTGNHLKCLPKEIVNQTKLREIYLKRNQFEV 179

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
            P  L     L       N I ++PE++   + + K  +  N L VL  +L    + L+ 
Sbjct: 180 FPQELCVLYTLEIIDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASL-CQCSQLSV 238

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S NLL+ +P++   L ++  + L  NR+  +P  I    SL   Y+GN  L  L   
Sbjct: 239 LDLSHNLLHSIPKSFAELRKMTEIGLSGNRLEKVPRLICRWTSLHLLYLGNTGLHRLRGS 298

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
              L  L  LDL  N L    ++ C L+ L VL L +N +  LP E+G ++ L+ L LTG
Sbjct: 299 FRCLVNLRFLDLSQNHLHHCPLQICALKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTG 358

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N         ++ P   L      +L   +D     T    +    R   + KEL +E  
Sbjct: 359 N-------EFLSFPEEVLSLASLEKLYIGQDQGFKLT---YVPEHIRKLQSLKELYIENN 408

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +L  +P  +     +  LD   N +++LP  +    +L+
Sbjct: 409 HLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQALK 447



 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 87/226 (38%), Gaps = 39/226 (17%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           R   +D     + +IP  I     L E ++ NN +  +P E+ +L  +  L L  N L+ 
Sbjct: 26  RTFFIDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRS 85

Query: 268 YC-------------------------VEACQLRLSVLDLSNNSLSGLPPEIGK-MTTLR 301
            C                         V +    L  L L    L  +P  I K +  L 
Sbjct: 86  LCPALGLLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVIFKNLHHLE 145

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L LTGN L+ L   +VN  T     YL+        ++     ++L  + T L +    
Sbjct: 146 LLGLTGNHLKCLPKEIVNQ-TKLREIYLKR-------NQFEVFPQELCVLYT-LEI---- 192

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           + L+   + AIP EI     + K  ++ N++  LP  L  C+ L V
Sbjct: 193 IDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASLCQCSQLSV 238


>gi|340713142|ref|XP_003395107.1| PREDICTED: protein lap4-like isoform 3 [Bombus terrestris]
          Length = 2051

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 166/365 (45%), Gaps = 61/365 (16%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D IL+ +R+   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  DDILRYSRSLEELLLDANHIRDLP----KNF---------FRLQKLRKLGLSDNEIHRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP-------------- 107
            D++N   L  L+VS N + ++P  I  L  L+  D S N I ++P              
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGL 136

Query: 108 ---------DEIGSATALVKFDCSSNQLKELPSSL-----------------------GR 135
                     + GS  AL   +   N LK LP SL                       G+
Sbjct: 137 NDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGK 196

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
              L +    +N +  LP ++ +   ++ LDV  N+L  L    I     LT+L  S+N+
Sbjct: 197 LPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEE-IGGLESLTDLHLSQNV 255

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           +  +P+ +G L +L  L + QNR+ ++ S+I  C +L E  +  N L  LP  +GKL  L
Sbjct: 256 IEKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNL 315

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L++  N L+    E   L+ L VL L +N L  LP E+G+ T L  L ++GN L+ L 
Sbjct: 316 NNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLP 375

Query: 315 SSLVN 319
            SL+N
Sbjct: 376 YSLIN 380



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 126/239 (52%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L E L  L  L  L++  N +  LPA IG+L  L+ L +  N +  +
Sbjct: 154 LQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L   D S N+L++LP  +G   +L+D   S N I  LP+ L +  K++ L 
Sbjct: 214 PPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L+ L++N I     L ELI ++N L  +P TIG L  L  L++ +N + S+P+ I
Sbjct: 274 VDQNRLSTLNSN-IGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLPTEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
                L    + +N L  LP E+G+ + L  LD+  N+L+        L L  + LS N
Sbjct: 333 GNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLINLNLKAVWLSKN 391



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 112/262 (42%), Gaps = 38/262 (14%)

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N I  LP++     K+ KL +  N++  L  + I ++  L EL  S+N +  +PE I +L
Sbjct: 47  NHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPD-IQNFENLVELDVSRNDIPDIPENIKNL 105

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L   D   N I  +P+      +L    + + +L+ LP + G L  L +L+L  N LK
Sbjct: 106 RALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLK 165

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
                  QL +L  LDL +N +  LP  IGK+  L++L L  N L+ L   +    T A 
Sbjct: 166 SLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLPPEIGELKTLAC 225

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           L    +RL            EDL                        P EI     +T L
Sbjct: 226 LDVSENRL------------EDL------------------------PEEIGGLESLTDL 249

Query: 386 DLSRNSIQELPPELSSCASLQV 407
            LS+N I++LP  L     L +
Sbjct: 250 HLSQNVIEKLPDGLGELQKLTI 271


>gi|418695046|ref|ZP_13256072.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957205|gb|EKO16120.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 525

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 168/353 (47%), Gaps = 20/353 (5%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN++  KL+ LP  IG+L  L+ L + +N ++ +P EI     L   D S NQL  LP+
Sbjct: 52  VLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLVILPN 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +GR  NL       N +T+LP+++     +  L    N+L +L    I     L  L  
Sbjct: 112 EIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKE-IGQLENLENLNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S+N L  +P+ IG L  L  L L  N+++++P+ I    +L E  +  N L  LP  +G+
Sbjct: 171 SENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGR 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TLDLH N+L     E  QL+ L  L+L NN L  LP EIG++  L+ L L  NPL
Sbjct: 231 LQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPL 290

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS------- 363
                  +    P     LR    + +    +  +E+ + +   LS+  K+ S       
Sbjct: 291 SFKERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVF-ELSLEYKDFSHLFPKVI 349

Query: 364 LEGMNLSA----------IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L+  NL +          +P EI     +  L L  N ++++P E+    +L+
Sbjct: 350 LKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLALGLNGLKDIPSEIGQLRNLE 402



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 116/239 (48%), Gaps = 18/239 (7%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLT 71
           LNL+ + L  +P E+   KN  E     KW + V L K I+   N+E L           
Sbjct: 53  LNLNGQKLTSLPREIGQLKNLRELS--LKWNQLVTLPKEIVELQNLEHL----------- 99

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
             ++S N+L  LP  IG L  L+SLD+  N +  +P EIG    L       N+L  LP 
Sbjct: 100 --DLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPK 157

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL +   S N +T++P+++     + +L + GN+L  L N  I     L EL  
Sbjct: 158 EIGQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNE-IGQLRNLQELNL 216

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
             N L  +P+ IG L  L  LDLH+NR+  +P       SL +  + NN L  LP E+G
Sbjct: 217 KWNQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIG 275



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 135/312 (43%), Gaps = 42/312 (13%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNLS   L  VP E+              +  +LQ+L L+ N +  L  ++  L  L  
Sbjct: 167 NLNLSENRLTTVPKEI-------------GQLKNLQELHLSGNQLVTLPNEIGQLRNLQE 213

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N+L  LP  IG L  L++LD+  N +  +P E G   +L K +  +N+L  LP  
Sbjct: 214 LNLKWNQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKE 273

Query: 133 LGRC---------LNLSDFKASN-------NCITSLPEDLADCS------------KMSK 164
           +G+          +N   FK          NC   L E   D              K+ +
Sbjct: 274 IGQLQNLQDLDLLMNPLSFKERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVFE 333

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +E    + L   +I  +  L  L         +P+ IG L  L  L L  N +  IPS
Sbjct: 334 LSLEYKDFSHLFPKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLALGLNGLKDIPS 393

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L    +  N L  LP E+G+L  L  L LH N+LK + V   QL+ L  LDLS
Sbjct: 394 EIGQLRNLEALNLEANVLEGLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLS 453

Query: 284 NNSLSGLPPEIG 295
            N L  LP EIG
Sbjct: 454 ANELITLPKEIG 465



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 93/180 (51%), Gaps = 7/180 (3%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNL+  K     +TSLP ++     + +L ++ N+L  L    I     L  L  S+N
Sbjct: 51  RVLNLNGQK-----LTSLPREIGQLKNLRELSLKWNQLVTLPKE-IVELQNLEHLDLSEN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P  IG L  L  LDL++N++ ++P  I    +L   +   N L+ LP E+G+L  
Sbjct: 105 QLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLEN 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L  N+L     E  QL+ L  L LS N L  LP EIG++  L++L L  N L TL
Sbjct: 165 LENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTL 224



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 169/425 (39%), Gaps = 107/425 (25%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS   L  +PNE+ +               +LQ L L  N +  L +++  L  L +L
Sbjct: 99  LDLSENQLVILPNEIGR-------------LKNLQSLDLYKNKLTTLPKEIGQLQNLQML 145

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
               N+L+ LP  IG+L  L++L++S N +  +P EIG    L +   S NQL  LP+ +
Sbjct: 146 WSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEI 205

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL +     N + +LP+ +     +  LD+  N+LT+L                  
Sbjct: 206 GQLRNLQELNLKWNQLVTLPKGIGRLQNLQTLDLHENRLTIL------------------ 247

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P   G L  L +L+L  NR++ +P  I    +L +  +  N LS    E  ++ 
Sbjct: 248 ------PREFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPLSF--KERKRIQ 299

Query: 254 KLG---TLDLHS----------NQLKEYCVEACQLRLSVLDLS----------------- 283
           KL     LDL            N  +E  ++  +L L   D S                 
Sbjct: 300 KLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVFELSLEYKDFSHLFPKVILKFRNLQSLH 359

Query: 284 --NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
             +     LP EIG++  L+ L L  N L+ +         P+ +  LR       + EA
Sbjct: 360 LYDCGFPTLPKEIGRLKNLKYLALGLNGLKDI---------PSEIGQLR-------NLEA 403

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                               L+LE   L  +P EI +   + KL L +N ++  P  +  
Sbjct: 404 --------------------LNLEANVLEGLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQ 443

Query: 402 CASLQ 406
             SLQ
Sbjct: 444 LKSLQ 448



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 74/171 (43%), Gaps = 28/171 (16%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
           +DC       LP  +GR  NL       N +  +P ++     +  L++E N        
Sbjct: 361 YDCG---FPTLPKEIGRLKNLKYLALGLNGLKDIPSEIGQLRNLEALNLEAN-------- 409

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
                           +L G+P+ IG L  L +L LHQN++   P  I    SL    + 
Sbjct: 410 ----------------VLEGLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLS 453

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
            N L  LP E+G+L  L  L+L +NQL     E  QL  L  L+LSNN LS
Sbjct: 454 ANELITLPKEIGQLENLENLNLSNNQLTTLSQEIGQLENLRELNLSNNQLS 504



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 68/128 (53%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N ++ +  ++  L  L  LN+  N L  LP  IG+L  L+ L +  N +  
Sbjct: 377 NLKYLALGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEIGQLRNLQKLSLHQNKLKI 436

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  IG   +L   D S+N+L  LP  +G+  NL +   SNN +T+L +++     + +L
Sbjct: 437 FPVGIGQLKSLQWLDLSANELITLPKEIGQLENLENLNLSNNQLTTLSQEIGQLENLREL 496

Query: 166 DVEGNKLT 173
           ++  N+L+
Sbjct: 497 NLSNNQLS 504


>gi|340721753|ref|XP_003399279.1| PREDICTED: protein lap1-like [Bombus terrestris]
          Length = 1040

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 182/394 (46%), Gaps = 47/394 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+L+N +L DVP +V+            +E   L+KL L  N I+ L   L     L VL
Sbjct: 22  LHLNNCNLYDVPPDVF-----------IYERT-LEKLYLDANRIKDLPRPLFQCHELRVL 69

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N+++ LP AI  L  L+ LD+S NSI ++PD I     L   D S N  +  P ++
Sbjct: 70  SLSDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAI 129

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
              + L +   ++  I  LP +    S +  L++  N L  L  ++ +    L  L    
Sbjct: 130 THIVGLRELYINDAYIEYLPANFGRLSALKTLELRENNLMTLPKSM-SRLINLQRLDIGN 188

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N    +PE +G L  L  L +  N I  +P +I+    L  F    NA+  +P+E+    
Sbjct: 189 NDFTELPEVVGDLINLTELWIDGNDIRRVPLNINQLYRLNHFDCTMNAIHIIPSEVEGWR 248

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +  + L SN++ +     C LR  V L + +N L+ LP +IG+M++L +L++T N L  
Sbjct: 249 DISIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSSLEELIVTKNFLEY 308

Query: 313 LRSSLVNGPTPALLK----------YLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L SS+       LL+          YLR   PE             I   T LS+    L
Sbjct: 309 LPSSI------GLLRKLHCLNVDNNYLRCLPPE-------------IGSCTALSL----L 345

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           SL   NL+ +P E+     +  L+L  N I+ LP
Sbjct: 346 SLRSNNLTRVPPELGHLSSLKVLNLVNNCIKFLP 379



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 126/238 (52%), Gaps = 8/238 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  NN+  L + +  L  L  L++ +N  +ELP  +G+L  L  L +  N I ++
Sbjct: 158 LKTLELRENNLMTLPKSMSRLINLQRLDIGNNDFTELPEVVGDLINLTELWIDGNDIRRV 217

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  I     L  FDC+ N +  +PS +    ++S    S+N I  LP+ L     +  L 
Sbjct: 218 PLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLK 277

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L  L N+ I   + L ELI +KN L  +P +IG L +L  L++  N +  +P  I
Sbjct: 278 VDDNQLNALPND-IGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCLNVDNNYLRCLPPEI 336

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
             C +L+   + +N L+ +P ELG LS L  L+L +N     C++   L +S+L+LSN
Sbjct: 337 GSCTALSLLSLRSNNLTRVPPELGHLSSLKVLNLVNN-----CIKF--LPVSMLNLSN 387


>gi|432930199|ref|XP_004081369.1| PREDICTED: protein scribble homolog [Oryzias latipes]
          Length = 1324

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 188/397 (47%), Gaps = 53/397 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D I + +R+   L L    L+D+P               ++  ++L++L L+ N ++KL 
Sbjct: 29  DEIFRYSRSLEELQLDFNQLKDLPK-------------PFFRLLNLRRLGLSDNLLQKLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D+ N   L  L++S N++SE+P +I     L+  D S N + ++PD      AL     
Sbjct: 76  PDVSNFMQLVELDISRNEISEIPESIKFCRALEIADFSGNHLSRLPDGFTQLRALAHLTL 135

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L+ LPS +G   NL   +   N + SLP  L+   K+ +LD+  N+L VL + L  
Sbjct: 136 NDVSLQTLPSDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGNNELEVLPDTL-G 194

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
           +   L EL   +N L+ +P  +G+L RL+ LD+ +NR+  +PS +SG  +L +  +  N 
Sbjct: 195 ALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENRLEELPSEVSGLLALTDLLLTQNM 254

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           L ALP  +G L +L  L +  N+L      V  C+  L+ L L+ N L  LP  +GK+  
Sbjct: 255 LEALPDSIGSLKQLSILKVDQNRLTHLTDSVGECE-NLTELVLTENFLQSLPSSLGKLKK 313

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS 359
           L  L +  N L         G  PA L    S                       L+V  
Sbjct: 314 LTNLNVDRNRL---------GSVPAELGGCAS-----------------------LNV-- 339

Query: 360 KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
             LSL    L  +P+E+ +A E+  LD++ N +Q LP
Sbjct: 340 --LSLRDNRLDRLPAELADATELHVLDVAGNRLQNLP 374



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 119/242 (49%), Gaps = 24/242 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L +N +E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGNNELEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+    AL     + N L+ LP S+G    LS  K   N +T L + + +C     
Sbjct: 234 ELPSEVSGLLALTDLLLTQNMLEALPDSIGSLKQLSILKVDQNRLTHLTDSVGECEN--- 290

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                LTEL+ ++N L  +P ++G L +L  L++ +NR+ S+P+
Sbjct: 291 ---------------------LTELVLTENFLQSLPSSLGKLKKLTNLNVDRNRLGSVPA 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            + GC SL    + +N L  LPAEL   ++L  LD+  N+L+        L L  + L+ 
Sbjct: 330 ELGGCASLNVLSLRDNRLDRLPAELADATELHVLDVAGNRLQNLPFALTNLNLKAMWLAE 389

Query: 285 NS 286
           N 
Sbjct: 390 NQ 391



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 150/316 (47%), Gaps = 15/316 (4%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           L+ L + FN +  +P        L +   S N L++LP  +   + L +   S N I+ +
Sbjct: 38  LEELQLDFNQLKDLPKPFFRLLNLRRLGLSDNLLQKLPPDVSNFMQLVELDISRNEISEI 97

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           PE +  C  +   D  GN L+ L +        L  L  +   L  +P  IG+L+ L+ L
Sbjct: 98  PESIKFCRALEIADFSGNHLSRLPDGF-TQLRALAHLTLNDVSLQTLPSDIGNLANLVTL 156

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L +N + S+P+S+S    L +  +GNN L  LP  LG L  L  L L  NQL     E 
Sbjct: 157 ELRENLLKSLPTSLSFLVKLEQLDLGNNELEVLPDTLGALPNLRELWLDRNQLSSLPPEL 216

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             LR L  LD+S N L  LP E+  +  L  LLLT N L  L  S+ +    ++LK  ++
Sbjct: 217 GNLRRLVCLDVSENRLEELPSEVSGLLALTDLLLTQNMLEALPDSIGSLKQLSILKVDQN 276

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
           RL    DS      E+L            EL L    L ++PS + +  ++T L++ RN 
Sbjct: 277 RLTHLTDSVGEC--ENLT-----------ELVLTENFLQSLPSSLGKLKKLTNLNVDRNR 323

Query: 392 IQELPPELSSCASLQV 407
           +  +P EL  CASL V
Sbjct: 324 LGSVPAELGGCASLNV 339


>gi|301773446|ref|XP_002922120.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
           [Ailuropoda melanoleuca]
          Length = 1629

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 168/363 (46%), Gaps = 61/363 (16%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           I + +R+   L L    LR++P   ++              ++L+KL L+ N I++L  +
Sbjct: 30  IYRYSRSLEELLLDANQLRELPKPFFR-------------LLNLRKLGLSDNEIQRLPPE 76

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + N   L  L+VS N + E+P +I     L+  D S N + ++P+      +L     + 
Sbjct: 77  VANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALND 136

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA-- 181
             L+ LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN+L VL + L A  
Sbjct: 137 VSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALP 196

Query: 182 ------------------------------SWTMLTELIA-------------SKNLLNG 198
                                         S   L EL A             S+NLL  
Sbjct: 197 NLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLLLLTDLLLSQNLLQR 256

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P+ IG L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L
Sbjct: 257 LPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELVLTENLLTALPRSLGKLTKLTNL 316

Query: 259 DLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           ++  N+L+    E   C + LSVL L +N L+ LPPE+     L  L + GN LR+L  +
Sbjct: 317 NVDRNRLEVLPPEIGGC-VALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPFA 375

Query: 317 LVN 319
           L +
Sbjct: 376 LTH 378



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 160/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 45  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 104

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LPE       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 105 ALEIADF--SGNPLSRLPEGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 161

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 162 LKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 221

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 222 VCLDVSENRLEELPAELGGLLLLTDLLLSQNLLQRLPDGIGQLKQL-------------- 267

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 268 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELVLTENLLTALPR 305

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 306 SLGKLTKLTNLNVDRNRLEVLPPEIGGCVALSV 338



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 130/241 (53%), Gaps = 1/241 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L  L L  N ++ L   L  L  L  L++  N+L  LP  +G L  L+ L +  N + 
Sbjct: 150 ANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQLS 209

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+G+   LV  D S N+L+ELP+ LG  L L+D   S N +  LP+ +    ++S 
Sbjct: 210 ALPPELGNLRRLVCLDVSENRLEELPAELGGLLLLTDLLLSQNLLQRLPDGIGQLKQLSI 269

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+L  ++   I     L+EL+ ++NLL  +P ++G L++L  L++ +NR+  +P 
Sbjct: 270 LKVDQNRLCEVTE-AIGDCENLSELVLTENLLTALPRSLGKLTKLTNLNVDRNRLEVLPP 328

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 329 EIGGCVALSVLSLRDNRLATLPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 388

Query: 285 N 285
           N
Sbjct: 389 N 389


>gi|443707990|gb|ELU03328.1| hypothetical protein CAPTEDRAFT_140756 [Capitella teleta]
          Length = 476

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 173/395 (43%), Gaps = 65/395 (16%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D +     L++L++  N I++L  +L     +  L VS N+++ LP A+G L  L+ LD 
Sbjct: 33  DVFTHERTLEELMVDANQIKELPRELFYCHGIRKLTVSDNEITLLPPALGTLANLEHLDF 92

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKEL-----------------------PSSLGR 135
           S N ++ IP+ I     L   + S N L +L                       P S GR
Sbjct: 93  SKNGVIDIPENIKGCKYLRVVEASVNPLGKLTEGFTQLLNLTELFLNDTFLDFLPGSFGR 152

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
              L   +   N + +LP      +++ +LD+  N+ T L + +I   T L EL    N 
Sbjct: 153 LSKLRILELRENHLKTLPRSFTRLTQIERLDIGNNEFTELPD-VIGGLTNLMELWCDTNQ 211

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           +  +P  +G+L +L+ LD  +NR+  I   IS C +LA+ ++ +N L  LP  LG+LS L
Sbjct: 212 IKAIPSVVGNLKQLMFLDASKNRLEFIAEQISECHTLADLHLSDNLLQHLPESLGRLSNL 271

Query: 256 GTLDLHSNQLKEYCVE---ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +L +  N+L   C+       + LS L++  N L  LPP IG +  LR L    N L  
Sbjct: 272 TSLKVDDNRLT--CLPFSLGGLVSLSELNVGGNDLEDLPPSIGLLRHLRTLYADENFLNE 329

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +   L +                                 + L+V    LSL G NL  +
Sbjct: 330 IPCELGS--------------------------------CSGLTV----LSLRGNNLMYV 353

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           P E+     +  L+LS N I+ LP  L+    LQ 
Sbjct: 354 PDELGRIPRLRVLNLSDNKIRSLPFSLTKLKQLQA 388



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 125/272 (45%), Gaps = 26/272 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N+++ L      L  +  L++ +N+ +ELP  IG L  L  L    N I  I
Sbjct: 156 LRILELRENHLKTLPRSFTRLTQIERLDIGNNEFTELPDVIGGLTNLMELWCDTNQIKAI 215

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +G+   L+  D S N+L+ +   +  C  L+D   S+N +  LPE L   S ++ L 
Sbjct: 216 PSVVGNLKQLMFLDASKNRLEFIAEQISECHTLADLHLSDNLLQHLPESLGRLSNLTSLK 275

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+LT L  +L      L+EL    N L  +P +IG L  L  L   +N +  IP  +
Sbjct: 276 VDDNRLTCLPFSL-GGLVSLSELNVGGNDLEDLPPSIGLLRHLRTLYADENFLNEIPCEL 334

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
             C  L    +  N L  +P ELG++                       RL VL+LS+N 
Sbjct: 335 GSCSGLTVLSLRGNNLMYVPDELGRIP----------------------RLRVLNLSDNK 372

Query: 287 LSGLPPEIGKMTTLRKLLLTGN---PLRTLRS 315
           +  LP  + K+  L+ L L  N   PL  L+S
Sbjct: 373 IRSLPFSLTKLKQLQALWLAENQTKPLIKLQS 404



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 149/340 (43%), Gaps = 16/340 (4%)

Query: 70  LTVLNVSHNKLSELPAAI-GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           +  L+  H+ L  +P  +      L+ L V  N I ++P E+     + K   S N++  
Sbjct: 17  VQTLDYRHSSLDFIPTDVFTHERTLEELMVDANQIKELPRELFYCHGIRKLTVSDNEITL 76

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP +LG   NL     S N +  +PE++  C  +  ++   N L  L+         LTE
Sbjct: 77  LPPALGTLANLEHLDFSKNGVIDIPENIKGCKYLRVVEASVNPLGKLTEGF-TQLLNLTE 135

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  +   L+ +P + G LS+L  L+L +N + ++P S +    +    +GNN  + LP  
Sbjct: 136 LFLNDTFLDFLPGSFGRLSKLRILELRENHLKTLPRSFTRLTQIERLDIGNNEFTELPDV 195

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +G L+ L  L   +NQ+K        L+ L  LD S N L  +  +I +  TL  L L+ 
Sbjct: 196 IGGLTNLMELWCDTNQIKAIPSVVGNLKQLMFLDASKNRLEFIAEQISECHTLADLHLSD 255

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L+ L  SL              RL      +    +   +  +    V+  EL++ G 
Sbjct: 256 NLLQHLPESL-------------GRLSNLTSLKVDDNRLTCLPFSLGGLVSLSELNVGGN 302

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +L  +P  I     +  L    N + E+P EL SC+ L V
Sbjct: 303 DLEDLPPSIGLLRHLRTLYADENFLNEIPCELGSCSGLTV 342


>gi|291223723|ref|XP_002731858.1| PREDICTED: leucine rich repeat containing 40-like, partial
           [Saccoglossus kowalevskii]
          Length = 1212

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 184/382 (48%), Gaps = 30/382 (7%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   ++K+IL  N + +L E +  L  L +L++SHNKL E+P+++ +L  L  LD+  N 
Sbjct: 592 EYRHIKKIILGGNKLSELPETISELTQLEILDLSHNKLKEIPSSLFDLSNLSHLDIRGNQ 651

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK- 161
           I  IP  IGS   L   D S N L  LP  +    NL       N I   P D+  CSK 
Sbjct: 652 ISLIPPNIGSLQRLETLDVSENCLSTLPREIKDLTNLKILDIGGNDIKCPPMDI--CSKG 709

Query: 162 -------------MSKLDVEGNKLTVLSNN-------LIASWTMLTELIASKNLLNGMPE 201
                        M K   + NK   L+N        +I+ +  + +L    N L+ +P+
Sbjct: 710 VDAFKRYWQIIELMEKSKNKDNKEMDLNNQNLEYLPCIISEYGHIKKLNLQNNRLSDLPD 769

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
            + +L++L  LD+  N++ +IP S+    +L    +    +S + + +  L+KL  LD+ 
Sbjct: 770 EMRNLTQLEVLDVSGNKLENIPPSLYKLTNLQHLILSGTRISIVDSNICNLTKLELLDVK 829

Query: 262 SNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
            N + +   E   L +L VLDL +N +  LP E+  +  L KL +  NP+      +   
Sbjct: 830 GNVITKLPPELGALDKLEVLDLQDNDIHNLPRELTSLKKLTKLCVERNPIEEPPYDICCK 889

Query: 321 PTPALLKY--LRSRLPENEDS--EASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPS 374
              A   Y  +   + +N +S  E   + + L+ + + +S  +  K+L+L    LSA+P 
Sbjct: 890 GFKAFNHYWDIIGMMEKNGESCEEMDLSSKQLVYIPSMISQYTHLKKLNLHNNYLSALPE 949

Query: 375 EIWEAGEITKLDLSRNSIQELP 396
           E+ +  ++ +L+LSRN   ELP
Sbjct: 950 EVGKLTDLEELNLSRNKFPELP 971



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 155/357 (43%), Gaps = 30/357 (8%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCL 137
           NKLSELP  I EL  L+ LD+S N + +IP  +   + L   D   NQ+  +P ++G   
Sbjct: 604 NKLSELPETISELTQLEILDLSHNKLKEIPSSLFDLSNLSHLDIRGNQISLIPPNIGSLQ 663

Query: 138 NLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIAS--------WTMLTEL 189
            L     S NC+++LP ++ D + +  LD+ GN +     ++ +         W ++  +
Sbjct: 664 RLETLDVSENCLSTLPREIKDLTNLKILDIGGNDIKCPPMDICSKGVDAFKRYWQIIELM 723

Query: 190 IASKNL-----------LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
             SKN            L  +P  I     + +L+L  NR+  +P  +     L    + 
Sbjct: 724 EKSKNKDNKEMDLNNQNLEYLPCIISEYGHIKKLNLQNNRLSDLPDEMRNLTQLEVLDVS 783

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
            N L  +P  L KL+ L  L L   ++       C L +L +LD+  N ++ LPPE+G +
Sbjct: 784 GNKLENIPPSLYKLTNLQHLILSGTRISIVDSNICNLTKLELLDVKGNVITKLPPELGAL 843

Query: 298 TTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS--------EASTTKEDLI 349
             L  L L  N +  L   L +     L K    R P  E          +A     D+I
Sbjct: 844 DKLEVLDLQDNDIHNLPRELTS--LKKLTKLCVERNPIEEPPYDICCKGFKAFNHYWDII 901

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            M  +   + +E+ L    L  IPS I +   + KL+L  N +  LP E+     L+
Sbjct: 902 GMMEKNGESCEEMDLSSKQLVYIPSMISQYTHLKKLNLHNNYLSALPEEVGKLTDLE 958



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 175/412 (42%), Gaps = 74/412 (17%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           ++W+ +++         +E+ +++ R       +N +  +L  LP  IG+   +K L +S
Sbjct: 398 QYWQIIEM---------LEEYQDESR-----VEMNFTGRRLFYLPNCIGDYKHIKKLRLS 443

Query: 100 FNSIMKIPDEIGSATA-LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
            N +  +PDE+   +  L + D S N+L E+P  + +  NL+    + N I ++  D+  
Sbjct: 444 GNELTTLPDEMKYMSEELDELDLSCNKLDEIPRCVLQLTNLTYLNLNGNVIHNISPDIKR 503

Query: 159 CSKMSKLDVEGNKLTVLSNNLI-------------------------------ASW---- 183
             K+  LD+ GNK+  L   L                                  W    
Sbjct: 504 LRKLQTLDLNGNKVMRLIRELAELPILETLQVGGNPIEEPPLTICEKGVPEFKQYWQIIG 563

Query: 184 -------TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
                  T L E+  S N    +P ++G    + ++ L  N++  +P +IS    L    
Sbjct: 564 MLEKYKDTSLDEMNLSGNGFICLPASVGEYRHIKKIILGGNKLSELPETISELTQLEILD 623

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           + +N L  +P+ L  LS L  LD+  NQ+         L RL  LD+S N LS LP EI 
Sbjct: 624 LSHNKLKEIPSSLFDLSNLSHLDIRGNQISLIPPNIGSLQRLETLDVSENCLSTLPREIK 683

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
            +T L+ L + GN ++     + +    A  +Y +      E  E S  K++        
Sbjct: 684 DLTNLKILDIGGNDIKCPPMDICSKGVDAFKRYWQII----ELMEKSKNKDN-------- 731

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
               KE+ L   NL  +P  I E G I KL+L  N + +LP E+ +   L+V
Sbjct: 732 ----KEMDLNNQNLEYLPCIISEYGHIKKLNLQNNRLSDLPDEMRNLTQLEV 779



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 185/399 (46%), Gaps = 33/399 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           ++K+ L+ NN+  L ++++++  L  +++S NKL   P ++ +L  L  LD+S N++  +
Sbjct: 234 IKKIRLSGNNLSTLPDEVKDMEQLQEIDLSCNKLVHFPPSLMKLTRLSVLDLSENAMTSL 293

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EI S + L K + S N +  LP ++G    L+  +     I  LP +L + S +  LD
Sbjct: 294 PNEICSLSHLQKLNISGNNIGVLPLAMGEMTELTSLEMRRIGIEFLPPELGNVSNLEVLD 353

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL----------------- 209
           + GN +T +   L     +   +I   ++     +  GS++                   
Sbjct: 354 LTGNHITSIPRELKKLSKLKELIIDGNSITEPPMDKCGSVADFRQYWQIIEMLEEYQDES 413

Query: 210 -IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS-KLGTLDLHSNQLKE 267
            + ++    R+  +P+ I     + +  +  N L+ LP E+  +S +L  LDL  N+L E
Sbjct: 414 RVEMNFTGRRLFYLPNCIGDYKHIKKLRLSGNELTTLPDEMKYMSEELDELDLSCNKLDE 473

Query: 268 YCVEACQLR---LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
             +  C L+   L+ L+L+ N +  + P+I ++  L+ L L GN +  L   L   P   
Sbjct: 474 --IPRCVLQLTNLTYLNLNGNVIHNISPDIKRLRKLQTLDLNGNKVMRLIRELAELPILE 531

Query: 325 LLKYLRSRLPENE----DSEASTTKE--DLITMATRLSVTS-KELSLEGMNLSAIPSEIW 377
            L+   + + E      +      K+   +I M  +   TS  E++L G     +P+ + 
Sbjct: 532 TLQVGGNPIEEPPLTICEKGVPEFKQYWQIIGMLEKYKDTSLDEMNLSGNGFICLPASVG 591

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           E   I K+ L  N + ELP  +S    L++   DL  NK
Sbjct: 592 EYRHIKKIILGGNKLSELPETISELTQLEI--LDLSHNK 628



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 182/409 (44%), Gaps = 67/409 (16%)

Query: 43   EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL----HMLKS--- 95
            E   ++KL L +N +  L +++RNL  L VL+VS NKL  +P ++ +L    H++ S   
Sbjct: 750  EYGHIKKLNLQNNRLSDLPDEMRNLTQLEVLDVSGNKLENIPPSLYKLTNLQHLILSGTR 809

Query: 96   ----------------LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNL 139
                            LDV  N I K+P E+G+   L   D   N +  LP  L     L
Sbjct: 810  ISIVDSNICNLTKLELLDVKGNVITKLPPELGALDKLEVLDLQDNDIHNLPRELTSLKKL 869

Query: 140  SDFKASNNCITSLPEDLADCSKMSK---------------------LDVEGNKLTVLSNN 178
            +      N I   P D+  C K  K                     +D+   +L  +  +
Sbjct: 870  TKLCVERNPIEEPPYDI--CCKGFKAFNHYWDIIGMMEKNGESCEEMDLSSKQLVYIP-S 926

Query: 179  LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            +I+ +T L +L    N L+ +PE +G L+ L  L+L +N+   +PS I     L+   + 
Sbjct: 927  MISQYTHLKKLNLHNNYLSALPEEVGKLTDLEELNLSRNKFPELPSIILNLSKLSMLDVS 986

Query: 239  NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLSNNSLSGLPPEIGKM 297
            +N LS + +++G + +   +DL  N +     E     +L+ LD+S N L+     +G  
Sbjct: 987  DNQLSVVSSDIGNIKE---VDLSHNSISIITNETNHSYKLTKLDVSKNRLTSFRENVGMF 1043

Query: 298  TTLRKLLLTGNPLRTLRSSLVNGPTP-ALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
              L++L ++ N +++     ++G     +L YL       E++      +++  + T L+
Sbjct: 1044 EKLQQLNISINEIKS-----IDGIHQLCMLTYLNI-----ENNPIKQIPQEISKLKT-LT 1092

Query: 357  VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            V    L      L+A+PS I    E+  +DLS N +  +P E+ S   L
Sbjct: 1093 V----LKASNNYLTALPSSIAHLVELLDVDLSHNEVTRIPKEIESLEKL 1137



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 119/250 (47%), Gaps = 18/250 (7%)

Query: 14   LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
            LNL N  L  +P EV K               DL++L L+ N   +L   + NL  L++L
Sbjct: 937  LNLHNNYLSALPEEVGK-------------LTDLEELNLSRNKFPELPSIILNLSKLSML 983

Query: 74   NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +VS N+LS + + IG +   K +D+S NSI  I +E   +  L K D S N+L     ++
Sbjct: 984  DVSDNQLSVVSSDIGNI---KEVDLSHNSISIITNETNHSYKLTKLDVSKNRLTSFRENV 1040

Query: 134  GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            G    L     S N I S+ + +     ++ L++E N +  +    I+    LT L AS 
Sbjct: 1041 GMFEKLQQLNISINEIKSI-DGIHQLCMLTYLNIENNPIKQIPQE-ISKLKTLTVLKASN 1098

Query: 194  NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
            N L  +P +I  L  L+ +DL  N +  IP  I     L    + +N L +LP ELG+L 
Sbjct: 1099 NYLTALPSSIAHLVELLDVDLSHNEVTRIPKEIESLEKLTTLNLCSNKLESLPRELGQLP 1158

Query: 254  KLGTLDLHSN 263
             L  + L  N
Sbjct: 1159 ALKDIRLDGN 1168



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 141/304 (46%), Gaps = 29/304 (9%)

Query: 43   EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
            +   L+KL L +N +  L E++  L  L  LN+S NK  ELP+ I  L  L  LDVS N 
Sbjct: 930  QYTHLKKLNLHNNYLSALPEEVGKLTDLEELNLSRNKFPELPSIILNLSKLSMLDVSDNQ 989

Query: 103  IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
            +  +  +IG+   + + D S N +  + +       L+    S N +TS  E++    K+
Sbjct: 990  LSVVSSDIGN---IKEVDLSHNSISIITNETNHSYKLTKLDVSKNRLTSFRENVGMFEKL 1046

Query: 163  SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             +L++  N++  +    I    MLT L    N +  +P+ I  L  L  L    N + ++
Sbjct: 1047 QQLNISINEIKSIDG--IHQLCMLTYLNIENNPIKQIPQEISKLKTLTVLKASNNYLTAL 1104

Query: 223  PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL 282
            PSSI+    L +  + +N ++ +P E+  L KL TL+L SN+L+                
Sbjct: 1105 PSSIAHLVELLDVDLSHNEVTRIPKEIESLEKLTTLNLCSNKLE---------------- 1148

Query: 283  SNNSLSGLPPEIGKMTTLRKLLLTGNP--LRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
                   LP E+G++  L+ + L GNP  +  + S++       + +Y R    EN   E
Sbjct: 1149 ------SLPRELGQLPALKDIRLDGNPDYIGDVPSAIYLHGIDKIKRYWRDIDTENSKEE 1202

Query: 341  ASTT 344
             S +
Sbjct: 1203 RSIS 1206



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 184/397 (46%), Gaps = 47/397 (11%)

Query: 40   KWWEAVDL---------QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL 90
            ++W+ ++L         +++ L + N+E L   +     +  LN+ +N+LS+LP  +  L
Sbjct: 715  RYWQIIELMEKSKNKDNKEMDLNNQNLEYLPCIISEYGHIKKLNLQNNRLSDLPDEMRNL 774

Query: 91   HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCIT 150
              L+ LDVS N +  IP  +   T L     S  ++  + S++     L       N IT
Sbjct: 775  TQLEVLDVSGNKLENIPPSLYKLTNLQHLILSGTRISIVDSNICNLTKLELLDVKGNVIT 834

Query: 151  SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP---------- 200
             LP +L    K+  LD++ N +  L   L  S   LT+L   +N +   P          
Sbjct: 835  KLPPELGALDKLEVLDLQDNDIHNLPREL-TSLKKLTKLCVERNPIEEPPYDICCKGFKA 893

Query: 201  -----ETIGSLSR----LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                 + IG + +       +DL   +++ IPS IS    L +  + NN LSALP E+GK
Sbjct: 894  FNHYWDIIGMMEKNGESCEEMDLSSKQLVYIPSMISQYTHLKKLNLHNNYLSALPEEVGK 953

Query: 252  LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            L+ L  L+L  N+  E       L +LS+LD+S+N LS +  +IG    ++++ L+ N +
Sbjct: 954  LTDLEELNLSRNKFPELPSIILNLSKLSMLDVSDNQLSVVSSDIG---NIKEVDLSHNSI 1010

Query: 311  RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
              + +   +      L   ++RL         T+  + + M  +L    ++L++    + 
Sbjct: 1011 SIITNETNHSYKLTKLDVSKNRL---------TSFRENVGMFEKL----QQLNISINEIK 1057

Query: 371  AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +I   I +   +T L++  N I+++P E+S   +L V
Sbjct: 1058 SIDG-IHQLCMLTYLNIENNPIKQIPQEISKLKTLTV 1093



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 29/275 (10%)

Query: 63  DLRNLPLLTVLNVSHNKLSELP-----------------------AAIGELHMLKSLDVS 99
           D+++L  L  L+VS N+L E+P                       + IG+L  LK L + 
Sbjct: 47  DIKSLTQLEELSVSGNELKEIPMCVYELVNLVLLNLNDNNIKSMSSKIGKLSQLKCLQMK 106

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N +  +PDEI    +L   + S+N + ++P+SLG    L      +N I  LP  L D 
Sbjct: 107 GNDLSSVPDEISELLSLQSLELSNNSMLQVPTSLGNLKELKVLDLQDNNIRVLPRQLKDI 166

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
             +  L V+ N +     +  +             +L    +T       I +DL    +
Sbjct: 167 ELLEDLLVKNNPIEDPPPDRCSGVEEFRRYWELVEILEKYKDTT-----CIEIDLRDKGL 221

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLS 278
             IP++I     + +  +  N LS LP E+  + +L  +DL  N+L  +     +L RLS
Sbjct: 222 TYIPATIGQYGHIKKIRLSGNNLSTLPDEVKDMEQLQEIDLSCNKLVHFPPSLMKLTRLS 281

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           VLDLS N+++ LP EI  ++ L+KL ++GN +  L
Sbjct: 282 VLDLSENAMTSLPNEICSLSHLQKLNISGNNIGVL 316



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 98/404 (24%), Positives = 179/404 (44%), Gaps = 46/404 (11%)

Query: 57  IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL 116
           I+ +   +  L  L  L +  N LS +P  I EL  L+SL++S NS++++P  +G+   L
Sbjct: 87  IKSMSSKIGKLSQLKCLQMKGNDLSSVPDEISELLSLQSLELSNNSMLQVPTSLGNLKEL 146

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS------------- 163
              D   N ++ LP  L     L D    NN I   P D   CS +              
Sbjct: 147 KVLDLQDNNIRVLPRQLKDIELLEDLLVKNNPIEDPPPD--RCSGVEEFRRYWELVEILE 204

Query: 164 --------KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
                   ++D+    LT +    I  +  + ++  S N L+ +P+ +  + +L  +DL 
Sbjct: 205 KYKDTTCIEIDLRDKGLTYIPAT-IGQYGHIKKIRLSGNNLSTLPDEVKDMEQLQEIDLS 263

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
            N+++  P S+     L+   +  NA+++LP E+  LS L  L++  N +    +   ++
Sbjct: 264 CNKLVHFPPSLMKLTRLSVLDLSENAMTSLPNEICSLSHLQKLNISGNNIGVLPLAMGEM 323

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL----------RSSLVNGPTPA 324
             L+ L++    +  LPPE+G ++ L  L LTGN + ++          +  +++G +  
Sbjct: 324 TELTSLEMRRIGIEFLPPELGNVSNLEVLDLTGNHITSIPRELKKLSKLKELIIDGNS-- 381

Query: 325 LLKYLRSRLPENEDSEASTTKE--DLITMATRLSVTSK-ELSLEGMNLSAIPSEIWEAGE 381
                 +  P ++    +  ++   +I M       S+ E++  G  L  +P+ I +   
Sbjct: 382 -----ITEPPMDKCGSVADFRQYWQIIEMLEEYQDESRVEMNFTGRRLFYLPNCIGDYKH 436

Query: 382 ITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISGCYL 425
           I KL LS N +  LP E+   +  ++   DL  NK   I  C L
Sbjct: 437 IKKLRLSGNELTTLPDEMKYMSE-ELDELDLSCNKLDEIPRCVL 479


>gi|440894992|gb|ELR47302.1| Leucine-rich repeat and IQ domain-containing protein 4, partial
           [Bos grunniens mutus]
          Length = 585

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 167/357 (46%), Gaps = 24/357 (6%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           A N+++ L +++ N   L  +++ HN+ +  P  + +L+ L+ +D+  N +  IP+EIG+
Sbjct: 176 AGNHLKSLPKEIVNQTKLREIHLKHNQFAAFPLELCDLYNLEIIDLDKNKLTVIPEEIGN 235

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            T L KF  S N L  LP SLGRC  LS    S N + +LP  L + S+M+++ + GN L
Sbjct: 236 LTKLKKFYVSYNSLAVLPESLGRCTRLSVLDVSYNRLHALPHTLGELSQMTEVGLSGNHL 295

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
             +   L+  WT L  L      L  +  +   L  L  LDL QN +   P  I    +L
Sbjct: 296 EKIP-RLLCRWTSLFLLYLHNTGLRVLRRSFRRLVNLQFLDLSQNFLEHCPLQICSLKNL 354

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLS 288
               + +N +  LP++ G LSKL  L L  NQ   +  E   L    +L +       L+
Sbjct: 355 EVLALDDNKICQLPSDFGSLSKLKILGLTGNQFSSFPKEILSLASLEKLYIGQDEGAKLT 414

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE-- 346
            LP  I ++  L++L +  N L  L  SL + P   +L           D   +  K+  
Sbjct: 415 HLPECIKRLQNLKELYIENNHLEYLPVSLGSMPNLEIL-----------DCHCNLIKQLP 463

Query: 347 DLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
           D I  A  L    KEL  E   ++ +P  +     +  L L+ N ++E  P +S CA
Sbjct: 464 DAICQAQAL----KELRFEDNLITYLPENLDSLVNLEVLTLTGNPMEE--PPMSVCA 514



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 177/416 (42%), Gaps = 61/416 (14%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS------ 99
           +L+++ L +N I ++ +D+++L  + VL ++ NKL  L   +G L  L+ LD+S      
Sbjct: 75  ELEEVHLENNLIAEIPKDIQHLRKIRVLYLNKNKLKNLCPEMGRLSNLEGLDLSDNPLEA 134

Query: 100 ------------------------------------------FNSIMKIPDEIGSATALV 117
                                                      N +  +P EI + T L 
Sbjct: 135 SSLPVLSGIRQLRELRLYRTDLADIPVVICKLLHHLELLGLAGNHLKSLPKEIVNQTKLR 194

Query: 118 KFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +     NQ    P  L    NL       N +T +PE++ + +K+ K  V  N L VL  
Sbjct: 195 EIHLKHNQFAAFPLELCDLYNLEIIDLDKNKLTVIPEEIGNLTKLKKFYVSYNSLAVLPE 254

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
           +L    T L+ L  S N L+ +P T+G LS++  + L  N +  IP  +    SL   Y+
Sbjct: 255 SL-GRCTRLSVLDVSYNRLHALPHTLGELSQMTEVGLSGNHLEKIPRLLCRWTSLFLLYL 313

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGK 296
            N  L  L     +L  L  LDL  N L+   ++ C L+ L VL L +N +  LP + G 
Sbjct: 314 HNTGLRVLRRSFRRLVNLQFLDLSQNFLEHCPLQICSLKNLEVLALDDNKICQLPSDFGS 373

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           ++ L+ L LTGN   +    +++  +         +L   +D  A  T   L     RL 
Sbjct: 374 LSKLKILGLTGNQFSSFPKEILSLAS-------LEKLYIGQDEGAKLTH--LPECIKRLQ 424

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL-QVKFSD 411
              KEL +E  +L  +P  +     +  LD   N I++LP  +    +L +++F D
Sbjct: 425 -NLKELYIENNHLEYLPVSLGSMPNLEILDCHCNLIKQLPDAICQAQALKELRFED 479



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 140/337 (41%), Gaps = 38/337 (11%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           +D S  S++ IP++I +   L +    +N + E+P  +     +     + N + +L  +
Sbjct: 56  IDASNQSLLTIPEDILALRELEEVHLENNLIAEIPKDIQHLRKIRVLYLNKNKLKNLCPE 115

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           +   S +  LD+  N L   S  +++    L EL   +  L  +P  I  L   + L   
Sbjct: 116 MGRLSNLEGLDLSDNPLEASSLPVLSGIRQLRELRLYRTDLADIPVVICKLLHHLELLGL 175

Query: 216 Q-NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN----------- 263
             N + S+P  I     L E ++ +N  +A P EL  L  L  +DL  N           
Sbjct: 176 AGNHLKSLPKEIVNQTKLREIHLKHNQFAAFPLELCDLYNLEIIDLDKNKLTVIPEEIGN 235

Query: 264 --QLKEYCVEACQL-----------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             +LK++ V    L           RLSVLD+S N L  LP  +G+++ + ++ L+GN L
Sbjct: 236 LTKLKKFYVSYNSLAVLPESLGRCTRLSVLDVSYNRLHALPHTLGELSQMTEVGLSGNHL 295

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             +   L    T   L YL +            T   ++  + R  V  + L L    L 
Sbjct: 296 EKIPRLLCRW-TSLFLLYLHN------------TGLRVLRRSFRRLVNLQFLDLSQNFLE 342

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             P +I     +  L L  N I +LP +  S + L++
Sbjct: 343 HCPLQICSLKNLEVLALDDNKICQLPSDFGSLSKLKI 379


>gi|319954347|ref|YP_004165614.1| adenylate cyclase [Cellulophaga algicola DSM 14237]
 gi|319423007|gb|ADV50116.1| Adenylate cyclase [Cellulophaga algicola DSM 14237]
          Length = 606

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 148/288 (51%), Gaps = 8/288 (2%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
           A  N   L+E L+    +  L++S   L+E+P++IG L  LK+LD+S N + ++P+EIG+
Sbjct: 20  AQKNSYSLEEALQTPERIEYLDLSSKNLTEIPSSIGALIHLKTLDISNNLLTQLPEEIGN 79

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
              L K   + N+L +LP  +     L D +   N I++LP+ +   +K+ KL +  N+L
Sbjct: 80  LKHLEKLVANKNKLTQLPEFILNLKELKDLRLDKNQISTLPKKIDKLAKLEKLTLRDNRL 139

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           +VL  +   +   L EL  + N +  + + I  L  L  L L  N +  +P  +    SL
Sbjct: 140 SVLPKSFY-NLLNLKELDLTSNTITQISKDISKLQSLTVLQLQFNPLKELPEKVGNLASL 198

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
              ++    LS+LP  +GKLS L  L    N LK        L+ L  L L  N +S LP
Sbjct: 199 ETLWLNKTELSSLPHSIGKLSNLKDLSAGYNHLKSIPATITALKNLESLSLEKNLISSLP 258

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR----SRLPE 335
            +IG +T L++L L  N L ++ +SL N    AL  YL+    + LPE
Sbjct: 259 ADIGNLTKLKRLNLNTNKLTSIPASLGNLKLSAL--YLKENDITELPE 304



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 145/284 (51%), Gaps = 14/284 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LS+++L ++P+ +                + L+ L +++N + +L E++ NL  L  L
Sbjct: 40  LDLSSKNLTEIPSSI-------------GALIHLKTLDISNNLLTQLPEEIGNLKHLEKL 86

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
             + NKL++LP  I  L  LK L +  N I  +P +I     L K     N+L  LP S 
Sbjct: 87  VANKNKLTQLPEFILNLKELKDLRLDKNQISTLPKKIDKLAKLEKLTLRDNRLSVLPKSF 146

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
              LNL +   ++N IT + +D++    ++ L ++ N L  L    + +   L  L  +K
Sbjct: 147 YNLLNLKELDLTSNTITQISKDISKLQSLTVLQLQFNPLKELPEK-VGNLASLETLWLNK 205

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
             L+ +P +IG LS L  L    N + SIP++I+   +L    +  N +S+LPA++G L+
Sbjct: 206 TELSSLPHSIGKLSNLKDLSAGYNHLKSIPATITALKNLESLSLEKNLISSLPADIGNLT 265

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKM 297
           KL  L+L++N+L         L+LS L L  N ++ LP  +  M
Sbjct: 266 KLKRLNLNTNKLTSIPASLGNLKLSALYLKENDITELPEAVIAM 309



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 128/305 (41%), Gaps = 63/305 (20%)

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           D SS  L E+PSS+G  ++L     SNN +T LPE++ +   + KL              
Sbjct: 41  DLSSKNLTEIPSSIGALIHLKTLDISNNLLTQLPEEIGNLKHLEKL-------------- 86

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
                     +A+KN L  +PE I +L  L  L L +N+I ++P  I     L +  + +
Sbjct: 87  ----------VANKNKLTQLPEFILNLKELKDLRLDKNQISTLPKKIDKLAKLEKLTLRD 136

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMT 298
           N LS LP     L  L  LDL SN + +   +  +L+ L+VL L  N L  LP ++G + 
Sbjct: 137 NRLSVLPKSFYNLLNLKELDLTSNTITQISKDISKLQSLTVLQLQFNPLKELPEKVGNLA 196

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
           +L  L L    L +L  S+  G    L                                 
Sbjct: 197 SLETLWLNKTELSSLPHSI--GKLSNL--------------------------------- 221

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKES 418
            K+LS    +L +IP+ I     +  L L +N I  LP ++ +   L  K  +L TNK +
Sbjct: 222 -KDLSAGYNHLKSIPATITALKNLESLSLEKNLISSLPADIGNLTKL--KRLNLNTNKLT 278

Query: 419 CISGC 423
            I   
Sbjct: 279 SIPAS 283



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 89/213 (41%), Gaps = 41/213 (19%)

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            + E + +  R+  LDL    +  IPSSI     L    + NN L+ LP E+G L  L  
Sbjct: 26  SLEEALQTPERIEYLDLSSKNLTEIPSSIGALIHLKTLDISNNLLTQLPEEIGNLKHLEK 85

Query: 258 LDLHSN---QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
           L  + N   QL E+ +   +L+   L L  N +S LP +I K+  L KL L  N L  L 
Sbjct: 86  LVANKNKLTQLPEFILNLKELK--DLRLDKNQISTLPKKIDKLAKLEKLTLRDNRLSVLP 143

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
            S  N                            L+ +        KEL L    ++ I  
Sbjct: 144 KSFYN----------------------------LLNL--------KELDLTSNTITQISK 167

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +I +   +T L L  N ++ELP ++ + ASL+ 
Sbjct: 168 DISKLQSLTVLQLQFNPLKELPEKVGNLASLET 200


>gi|332210029|ref|XP_003254112.1| PREDICTED: leucine-rich repeat-containing protein 1 [Nomascus
           leucogenys]
          Length = 504

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 181/401 (45%), Gaps = 55/401 (13%)

Query: 6   KAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLR 65
           +  R   S++  + SL  VP E+Y+             A  L++L+L  N + +L E   
Sbjct: 9   RCNRHVESIDKRHCSLVYVPEEIYRY------------ARSLEELLLDANQLRELPEQFF 56

Query: 66  NLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ 125
            L  L  L +S N++  LP  I     L  LDVS N I +IP+ I    AL   D S N 
Sbjct: 57  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNP 116

Query: 126 LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN-----NLI 180
           L  LP S     NL+    ++  + SLPE++        LDV    + +L+        I
Sbjct: 117 LTRLPESFPELQNLTCLSVNDISLQSLPENIGKNEIPPNLDV---TMVILAKCDFLPESI 173

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
            +   L +L    N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N
Sbjct: 174 GALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQN 233

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTL 300
            L  +P  +GKL KL                      S+L +  N L+ LP  +G   +L
Sbjct: 234 LLETIPDGIGKLKKL----------------------SILKVDQNRLTQLPEAVGDCESL 271

Query: 301 RKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSK 360
            +L+LT N L TL  S+        LK L S L  + +   S  KE  I     L+V   
Sbjct: 272 TELVLTENQLLTLPKSI------GKLKKL-SNLNADRNKLVSLPKE--IGGCCSLTV--- 319

Query: 361 ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
              +    L+ IPSE+ +A E+  LD++ N +  LP  L++
Sbjct: 320 -FCVRDNRLTRIPSEVSQATELHVLDVAGNRLLHLPLSLTA 359



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 123/219 (56%), Gaps = 1/219 (0%)

Query: 68  PLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK 127
           P L V  V   K   LP +IG L  LK L +  N + ++P EIG+   L+  D S N+L+
Sbjct: 154 PNLDVTMVILAKCDFLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLE 213

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLT 187
            LP  +    +L+D   S N + ++P+ +    K+S L V+ N+LT L    +     LT
Sbjct: 214 RLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEA-VGDCESLT 272

Query: 188 ELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
           EL+ ++N L  +P++IG L +L  L+  +N+++S+P  I GCCSL  F + +N L+ +P+
Sbjct: 273 ELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPS 332

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
           E+ + ++L  LD+  N+L    +    L+L  L LS+N 
Sbjct: 333 EVSQATELHVLDVAGNRLLHLPLSLTALKLKALWLSDNQ 371



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 146/336 (43%), Gaps = 68/336 (20%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N++ E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE             E   LT LS N I+              
Sbjct: 106 ALQVADF--SGNPLTRLPESFP----------ELQNLTCLSVNDIS-------------- 139

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILS----IPSSISGCCSLAEFYMGNNALSALPAELGK 251
           L  +PE IG       LD+    IL+    +P SI     L + ++  N LS LP E+G 
Sbjct: 140 LQSLPENIGKNEIPPNLDVTM-VILAKCDFLPESIGALLHLKDLWLDGNQLSELPQEIGN 198

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
           L  L             C          LD+S N L  LP EI  +T+L  L+++ N L 
Sbjct: 199 LKNL------------LC----------LDVSENRLERLPEEISGLTSLTDLVISQNLLE 236

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSA 371
           T+   +      ++LK  ++RL   +  EA    E L            EL L    L  
Sbjct: 237 TIPDGIGKLKKLSILKVDQNRL--TQLPEAVGDCESLT-----------ELVLTENQLLT 283

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +P  I +  +++ L+  RN +  LP E+  C SL V
Sbjct: 284 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTV 319



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 18/221 (8%)

Query: 199 MPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
           +PE I   +R L  L L  N++  +P        L +  + +N +  LP E+    +L  
Sbjct: 27  VPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVE 86

Query: 258 LDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
           LD+  N++ E    +  C+  L V D S N L+ LP    ++  L  L +    L++L  
Sbjct: 87  LDVSRNEIPEIPESISFCK-ALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPE 145

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
           ++     P          P  + +     K D +  +    +  K+L L+G  LS +P E
Sbjct: 146 NIGKNEIP----------PNLDVTMVILAKCDFLPESIGALLHLKDLWLDGNQLSELPQE 195

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           I     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 196 IGNLKNLLCLDVSENRLERLPEEISGLTSL----TDLVISQ 232


>gi|408490495|ref|YP_006866864.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
           ATCC 700755]
 gi|408467770|gb|AFU68114.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
           ATCC 700755]
          Length = 495

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 133/254 (52%), Gaps = 5/254 (1%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP  IG L  L+ LD+S      +P+ IG+ T+L K +  SN L  LP S+G   +L + 
Sbjct: 223 LPEEIGSLSKLEELDLSQCGFTTLPESIGNLTSLKKLNLVSNNLTTLPESIGNLTSLEEL 282

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
               N +T+LPE + + S++       NKL+VL  + I + T L EL   +  L  +PE+
Sbjct: 283 YLGKNNLTTLPESIGNLSRLKTFFSGSNKLSVLPES-IGNLTSLEELFLRETDLTTLPES 341

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG+L  L RL L+++ + ++P SI    SL +  +  N L+ LP  +G L++L  LDL  
Sbjct: 342 IGNLISLERLYLNESNLTALPQSIGNLTSLEKLNLDGNRLTTLPESIGNLTRLDLLDLQG 401

Query: 263 NQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR---SSLV 318
           N+L         L  L    L+NN+L+ LP  IG +  L  L L GN L TL     SL 
Sbjct: 402 NKLTTLPESIGNLTSLDEFILNNNALTVLPESIGNLIKLSALYLFGNDLTTLPESIGSLK 461

Query: 319 NGPTPALLKYLRSR 332
           N  T  +LK   +R
Sbjct: 462 NNLTIYMLKSQYTR 475



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 120/219 (54%), Gaps = 1/219 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L+      L E + NL  L  LN+  N L+ LP +IG L  L+ L +  N++  +
Sbjct: 233 LEELDLSQCGFTTLPESIGNLTSLKKLNLVSNNLTTLPESIGNLTSLEELYLGKNNLTTL 292

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ IG+ + L  F   SN+L  LP S+G   +L +       +T+LPE + +   + +L 
Sbjct: 293 PESIGNLSRLKTFFSGSNKLSVLPESIGNLTSLEELFLRETDLTTLPESIGNLISLERLY 352

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  + LT L  + I + T L +L    N L  +PE+IG+L+RL  LDL  N++ ++P SI
Sbjct: 353 LNESNLTALPQS-IGNLTSLEKLNLDGNRLTTLPESIGNLTRLDLLDLQGNKLTTLPESI 411

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
               SL EF + NNAL+ LP  +G L KL  L L  N L
Sbjct: 412 GNLTSLDEFILNNNALTVLPESIGNLIKLSALYLFGNDL 450



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 102/191 (53%), Gaps = 1/191 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L  NN+  L E + NL  L       NKLS LP +IG L  L+ L +    +  +
Sbjct: 279 LEELYLGKNNLTTLPESIGNLSRLKTFFSGSNKLSVLPESIGNLTSLEELFLRETDLTTL 338

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ IG+  +L +   + + L  LP S+G   +L       N +T+LPE + + +++  LD
Sbjct: 339 PESIGNLISLERLYLNESNLTALPQSIGNLTSLEKLNLDGNRLTTLPESIGNLTRLDLLD 398

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++GNKLT L  + I + T L E I + N L  +PE+IG+L +L  L L  N + ++P SI
Sbjct: 399 LQGNKLTTLPES-IGNLTSLDEFILNNNALTVLPESIGNLIKLSALYLFGNDLTTLPESI 457

Query: 227 SGCCSLAEFYM 237
               +    YM
Sbjct: 458 GSLKNNLTIYM 468



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 127/297 (42%), Gaps = 68/297 (22%)

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP  +G    L +   S    T+LPE + + + + KL++  N LT L  + I + T L E
Sbjct: 223 LPEEIGSLSKLEELDLSQCGFTTLPESIGNLTSLKKLNLVSNNLTTLPES-IGNLTSLEE 281

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L   KN L  +PE+IG+LSRL       N++  +P SI    SL E ++    L+ LP  
Sbjct: 282 LYLGKNNLTTLPESIGNLSRLKTFFSGSNKLSVLPESIGNLTSLEELFLRETDLTTLPES 341

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           +G L                      + L  L L+ ++L+ LP  IG +T+L KL L GN
Sbjct: 342 IGNL----------------------ISLERLYLNESNLTALPQSIGNLTSLEKLNLDGN 379

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L TL  S+ N                                 TRL +    L L+G  
Sbjct: 380 RLTTLPESIGN--------------------------------LTRLDL----LDLQGNK 403

Query: 369 LSAIPSEIWEAGEITKLD---LSRNSIQELPPELSSCASLQVKF---SDLVTNKESC 419
           L+ +P  I   G +T LD   L+ N++  LP  + +   L   +   +DL T  ES 
Sbjct: 404 LTTLPESI---GNLTSLDEFILNNNALTVLPESIGNLIKLSALYLFGNDLTTLPESI 457



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 65/113 (57%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           + L++L L  +N+  L + + NL  L  LN+  N+L+ LP +IG L  L  LD+  N + 
Sbjct: 346 ISLERLYLNESNLTALPQSIGNLTSLEKLNLDGNRLTTLPESIGNLTRLDLLDLQGNKLT 405

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
            +P+ IG+ T+L +F  ++N L  LP S+G  + LS      N +T+LPE + 
Sbjct: 406 TLPESIGNLTSLDEFILNNNALTVLPESIGNLIKLSALYLFGNDLTTLPESIG 458


>gi|296227601|ref|XP_002759487.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Callithrix jacchus]
          Length = 560

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 191/409 (46%), Gaps = 42/409 (10%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           ++   R    L L    L+++P  + KN               L+ L L  N+++ L ++
Sbjct: 113 VVSFLRALRELRLYQTDLKEIPVTICKNLHH------------LELLGLTGNHLKCLPKE 160

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + N   L  + +  N+L   P  +  L+ L+ +D+  N I  IP+EIG  T L KF  +S
Sbjct: 161 IVNQTKLREIYLKRNQLEVFPQELCVLYNLEIIDLDENKIGAIPEEIGHLTQLQKFFLAS 220

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N L  LP SL +C  LS    S+N + S+P  LA+  +M+++ + GN+L  +  +LI  W
Sbjct: 221 NNLPVLPVSLCQCSQLSVLDLSHNLLHSIPNSLAELREMTEIGLSGNRLEKVP-HLICRW 279

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIR---LDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           T L  L+  +N   G+    GS  RL+    LDL QN +   P  I    +L    + +N
Sbjct: 280 TSL-HLLYLRN--TGLRRLRGSFRRLVNLRCLDLSQNHLDHCPPQICVLKNLEVLALDDN 336

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGK 296
            +  LP+EL  LSKL  L L  N+   +  E   L    +L +     + L+ +P  IGK
Sbjct: 337 KIGQLPSELNSLSKLKILGLTGNEFLSFPEEVLSLESLEKLYIGQDQGSKLTYVPEHIGK 396

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE--DLITMATR 354
           + +L++L +  N L  L  SL  G  P L         E  D   ++ K+  D I  A  
Sbjct: 397 LQSLKELYIENNRLEYLPMSL--GSIPNL---------EVLDCRHNSLKQLPDAICQAQA 445

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
           L    KEL LE   L+ +P  +     I  L L  N ++E P E+  CA
Sbjct: 446 L----KELLLEDNLLTHLPENLDSLVNIKVLTLMDNPMKEPPKEV--CA 488



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 155/339 (45%), Gaps = 13/339 (3%)

Query: 70  LTVLNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           L  L +    L E+P  I + LH L+ L ++ N +  +P EI + T L +     NQL+ 
Sbjct: 120 LRELRLYQTDLKEIPVTICKNLHHLELLGLTGNHLKCLPKEIVNQTKLREIYLKRNQLEV 179

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
            P  L    NL       N I ++PE++   +++ K  +  N L VL  +L    + L+ 
Sbjct: 180 FPQELCVLYNLEIIDLDENKIGAIPEEIGHLTQLQKFFLASNNLPVLPVSL-CQCSQLSV 238

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S NLL+ +P ++  L  +  + L  NR+  +P  I    SL   Y+ N  L  L   
Sbjct: 239 LDLSHNLLHSIPNSLAELREMTEIGLSGNRLEKVPHLICRWTSLHLLYLRNTGLRRLRGS 298

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
             +L  L  LDL  N L     + C L+ L VL L +N +  LP E+  ++ L+ L LTG
Sbjct: 299 FRRLVNLRCLDLSQNHLDHCPPQICVLKNLEVLALDDNKIGQLPSELNSLSKLKILGLTG 358

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N   +    ++     +L    +  + +++ S+ +   E +  + +      KEL +E  
Sbjct: 359 NEFLSFPEEVL-----SLESLEKLYIGQDQGSKLTYVPEHIGKLQS-----LKELYIENN 408

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            L  +P  +     +  LD   NS+++LP  +    +L+
Sbjct: 409 RLEYLPMSLGSIPNLEVLDCRHNSLKQLPDAICQAQALK 447



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 136/295 (46%), Gaps = 5/295 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
            LQK  LA NN+  L   L     L+VL++SHN L  +P ++ EL  +  + +S N + K
Sbjct: 212 QLQKFFLASNNLPVLPVSLCQCSQLSVLDLSHNLLHSIPNSLAELREMTEIGLSGNRLEK 271

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  I   T+L      +  L+ L  S  R +NL     S N +   P  +     +  L
Sbjct: 272 VPHLICRWTSLHLLYLRNTGLRRLRGSFRRLVNLRCLDLSQNHLDHCPPQICVLKNLEVL 331

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN---RILSI 222
            ++ NK+  L + L  S + L  L  + N     PE + SL  L +L + Q+   ++  +
Sbjct: 332 ALDDNKIGQLPSEL-NSLSKLKILGLTGNEFLSFPEEVLSLESLEKLYIGQDQGSKLTYV 390

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P  I    SL E Y+ NN L  LP  LG +  L  LD   N LK+     CQ + L  L 
Sbjct: 391 PEHIGKLQSLKELYIENNRLEYLPMSLGSIPNLEVLDCRHNSLKQLPDAICQAQALKELL 450

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           L +N L+ LP  +  +  ++ L L  NP++     +      A+ KYL+ +   N
Sbjct: 451 LEDNLLTHLPENLDSLVNIKVLTLMDNPMKEPPKEVCAEGNEAIWKYLKEKRKRN 505



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 121/293 (41%), Gaps = 38/293 (12%)

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D S+  L  +P  +     + +    NN I  +P+++    K+  L ++ N L  L   
Sbjct: 30  IDASNQSLTAIPLEIFTFTEVEEVHLENNQIEEIPQEIQCLKKIRVLYLDKNNLRSLCPA 89

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY-M 237
           L    ++ +  ++   + +     +  L  L  L L+Q  +  IP +I       E   +
Sbjct: 90  LGLLSSLESLDLSYNPIFSSSLLVVSFLRALRELRLYQTDLKEIPVTICKNLHHLELLGL 149

Query: 238 GNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGK 296
             N L  LP E+   +KL  + L  NQL+ +  E C L  L ++DL  N +  +P EIG 
Sbjct: 150 TGNHLKCLPKEIVNQTKLREIYLKRNQLEVFPQELCVLYNLEIIDLDENKIGAIPEEIGH 209

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS 356
           +T L+K  L  N L  L  SL                                   ++LS
Sbjct: 210 LTQLQKFFLASNNLPVLPVSLCQ--------------------------------CSQLS 237

Query: 357 VTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           V    L L    L +IP+ + E  E+T++ LS N ++++P  +    SL + +
Sbjct: 238 V----LDLSHNLLHSIPNSLAELREMTEIGLSGNRLEKVPHLICRWTSLHLLY 286


>gi|395512688|ref|XP_003760567.1| PREDICTED: protein scribble homolog [Sarcophilus harrisii]
          Length = 1789

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 170/359 (47%), Gaps = 61/359 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQV 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L  +   L E
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGGNDLEVLPDTL-GALPNLRE 201

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG-------------------- 228
           L   +N L+ +P  +G+L RL+ LD+ +N++  +P+ +SG                    
Sbjct: 202 LWLDRNQLSTLPPELGNLRRLVCLDVSENKLEHLPAEVSGLTLLTDLLLSQNLLERLPDG 261

Query: 229 --------------------------CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
                                     C +L+E  +  N L+ALP  LGKL+KL  L++  
Sbjct: 262 IGQLKQLSILKVDQNRLCEVTEAIGECENLSELILTENMLTALPRSLGKLTKLTNLNVDR 321

Query: 263 NQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           N+L     E   C   L+VL L +N L+ LPPE+   T L  L + GN L++L  +L +
Sbjct: 322 NRLGTLPAEVGGC-TSLNVLSLRDNRLASLPPELAGTTELHVLDVAGNRLQSLPFALTH 379



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENKLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+   T L     S N L+ LP  +G+   LS  K   N +  + E + +C  +S 
Sbjct: 234 HLPAEVSGLTLLTDLLLSQNLLERLPDGIGQLKQLSILKVDQNRLCEVTEAIGECENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++N+L  +P ++G L++L  L++ +NR+ ++P+
Sbjct: 293 -----------------------ELILTENMLTALPRSLGKLTKLTNLNVDRNRLGTLPA 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            + GC SL    + +N L++LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EVGGCTSLNVLSLRDNRLASLPPELAGTTELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L VL  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQVLPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LS LP ELG L +L
Sbjct: 163 LKSLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+    E +    L+ L LS N L  LP  IG++  L              
Sbjct: 223 VCLDVSENKLEHLPAEVSGLTLLTDLLLSQNLLERLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGECENL-----------SELILTENMLTALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN +  LP E+  C SL V
Sbjct: 307 SLGKLTKLTNLNVDRNRLGTLPAEVGGCTSLNV 339


>gi|307180798|gb|EFN68662.1| Protein lap4 [Camponotus floridanus]
          Length = 2056

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 166/365 (45%), Gaps = 61/365 (16%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D IL+ +R+   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  DDILRYSRSLEELLLDANHIRDLP----KNF---------FRLQRLRKLGLSDNEIHRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP-------------- 107
            D++N   L  L+VS N + ++P  I  L  L+  D S N I ++P              
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGL 136

Query: 108 ---------DEIGSATALVKFDCSSNQLKELPSSL-----------------------GR 135
                     + GS  AL   +   N LK LP SL                       G+
Sbjct: 137 NDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLFKLERLDLGDNEIEELPSHIGK 196

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
              L +    +N +  LP ++ +   ++ LDV  N+L  L +  I     LT+L  S+N+
Sbjct: 197 LPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPDE-IGGLESLTDLHLSQNV 255

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           +  +P+ +G L +L  L + QNR+ ++  SI  C +L E  +  N L  LP  +GKL  L
Sbjct: 256 IEKLPDGLGELKKLTILKVDQNRLSTLNPSIGKCENLQELILTENFLLELPVSIGKLCNL 315

Query: 256 GTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L++  N L+   +E   L +L VL L +N L  LP E+G+ + L  L ++GN L  L 
Sbjct: 316 NNLNVDRNSLQFLPIEIGNLKKLGVLSLRDNKLQYLPAEVGQCSALHVLDVSGNRLHYLP 375

Query: 315 SSLVN 319
            SL+N
Sbjct: 376 YSLIN 380



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 124/239 (51%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L E L  L  L  L++  N++ ELP+ IG+L  L+ L +  N +  +
Sbjct: 154 LQSLELRENLLKSLPESLSQLFKLERLDLGDNEIEELPSHIGKLPALQELWLDHNQLQHL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L   D S N+L++LP  +G   +L+D   S N I  LP+ L +  K++ L 
Sbjct: 214 PPEIGELKTLACLDVSENRLEDLPDEIGGLESLTDLHLSQNVIEKLPDGLGELKKLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L+ L N  I     L ELI ++N L  +P +IG L  L  L++ +N +  +P  I
Sbjct: 274 VDQNRLSTL-NPSIGKCENLQELILTENFLLELPVSIGKLCNLNNLNVDRNSLQFLPIEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
                L    + +N L  LPAE+G+ S L  LD+  N+L         L L  + LS N
Sbjct: 333 GNLKKLGVLSLRDNKLQYLPAEVGQCSALHVLDVSGNRLHYLPYSLINLNLKAVWLSEN 391



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 168/362 (46%), Gaps = 38/362 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L+L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ I +  AL   D SSN +  LP+   +  NL+    ++  +T+LP D      +  L+
Sbjct: 99  PENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLE 158

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +                         +NLL  +PE++  L +L RLDL  N I  +PS I
Sbjct: 159 LR------------------------ENLLKSLPESLSQLFKLERLDLGDNEIEELPSHI 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L E ++ +N L  LP E+G+L  L  LD+  N+L++   E   L  L+ L LS N
Sbjct: 195 GKLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPDEIGGLESLTDLHLSQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            +  LP  +G++  L  L +  N L TL  S+  G    L + +   L EN   E   + 
Sbjct: 255 VIEKLPDGLGELKKLTILKVDQNRLSTLNPSI--GKCENLQELI---LTENFLLELPVSI 309

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
             L  +          L+++  +L  +P EI    ++  L L  N +Q LP E+  C++L
Sbjct: 310 GKLCNL--------NNLNVDRNSLQFLPIEIGNLKKLGVLSLRDNKLQYLPAEVGQCSAL 361

Query: 406 QV 407
            V
Sbjct: 362 HV 363



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 130/303 (42%), Gaps = 39/303 (12%)

Query: 106 IPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           IPD+I   + +L +    +N +++LP +  R   L     S+N I  LP D+ +   + +
Sbjct: 28  IPDDILRYSRSLEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVE 87

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LDV                        S+N +  +PE I +L  L   D   N I  +P+
Sbjct: 88  LDV------------------------SRNDIPDIPENIKNLQALQVADFSSNPIPRLPA 123

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
                 +L    + + +L+ LP + G L  L +L+L  N LK       QL +L  LDL 
Sbjct: 124 GFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLFKLERLDLG 183

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           +N +  LP  IGK+  L++L L  N L+ L   +    T A L    +RL          
Sbjct: 184 DNEIEELPSHIGKLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRL---------- 233

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
             EDL      L   + +L L    +  +P  + E  ++T L + +N +  L P +  C 
Sbjct: 234 --EDLPDEIGGLESLT-DLHLSQNVIEKLPDGLGELKKLTILKVDQNRLSTLNPSIGKCE 290

Query: 404 SLQ 406
           +LQ
Sbjct: 291 NLQ 293


>gi|427795749|gb|JAA63326.1| Putative leucine rich repeat protein, partial [Rhipicephalus
           pulchellus]
          Length = 463

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 190/397 (47%), Gaps = 33/397 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ ++  L DVP+EV+ N++             L++L L  N I+ L   L +   L  L
Sbjct: 16  LDYAHHGLEDVPSEVF-NYERT-----------LEELYLNANQIKDLPRPLFHCHGLRKL 63

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S N +  LP A+  L  L+ LD+S N++++IPD I     L   + S N + +LP   
Sbjct: 64  NLSDNDIQTLPPALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGF 123

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            + LN+     ++  +  LP +    SK+  L++  N L VL  ++ A  T L+ L   +
Sbjct: 124 TQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSM-ARLTELSRLDIGQ 182

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N    +PE IGSL  L  L    NR+ S+PS +     L       N +S +  E+  ++
Sbjct: 183 NDFTELPEVIGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASRNRISFIADEIENMT 242

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  L L +N+L++       L+ L+ L L +N L+ LP  IG+++ L +L++  N + +
Sbjct: 243 MLSDLTLTTNKLQKIPETLGFLQNLTTLRLDDNHLATLPDSIGQLSKLEELIINSNEIDS 302

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL---ITMATRLSVTSKELSLEGMNL 369
           L S++       LL+ L   + ++         EDL   I   ++L V    LSL    L
Sbjct: 303 LPSTI------GLLRNLTLLMADD------NLLEDLPPEIGSCSKLRV----LSLRDNRL 346

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
             +P E+     +  ++LS N ++ LP  L+    L 
Sbjct: 347 CNVPDELGHLSSLRVVNLSGNQLRHLPVSLAKLGGLH 383



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 143/281 (50%), Gaps = 5/281 (1%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           + + +++++L L    +E L  +   L  L +L +  N L  LP ++  L  L  LD+  
Sbjct: 123 FTQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSRLDIGQ 182

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N   ++P+ IGS  +L +  C SN+L  LPS +G  + L+   AS N I+ + +++ + +
Sbjct: 183 NDFTELPEVIGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASRNRISFIADEIENMT 242

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            +S L +  NKL  +   L      LT L    N L  +P++IG LS+L  L ++ N I 
Sbjct: 243 MLSDLTLTTNKLQKIPETL-GFLQNLTTLRLDDNHLATLPDSIGQLSKLEELIINSNEID 301

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
           S+PS+I    +L      +N L  LP E+G  SKL  L L  N+L     E   L  L V
Sbjct: 302 SLPSTIGLLRNLTLLMADDNLLEDLPPEIGSCSKLRVLSLRDNRLCNVPDELGHLSSLRV 361

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGN---PLRTLRSSL 317
           ++LS N L  LP  + K+  L  L L+ N   PL  L+S +
Sbjct: 362 VNLSGNQLRHLPVSLAKLGGLHALWLSQNQTKPLVLLQSDV 402


>gi|390370821|ref|XP_001195669.2| PREDICTED: uncharacterized protein LOC756567 [Strongylocentrotus
           purpuratus]
          Length = 548

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 121/218 (55%), Gaps = 1/218 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LTVLN+S+N+L  LP  IG L  L+ L + +N + K+P  IG+ + L + DC +N L+ L
Sbjct: 219 LTVLNLSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLPKCIGNFSHLQELDCKNNHLQSL 278

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           PS+LGR   L     +NN +T L   +   + + +L    N+LT L + +  +   LT L
Sbjct: 279 PSTLGRLSILVILNVTNNLLTELTGSIGQLTHLEELCAHSNQLTSLPDEM-CNLVNLTAL 337

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
              +N L  +P   G L RL  LDL    +  +P+S+S C SL + ++ NN L++LP ++
Sbjct: 338 YVGENHLRSLPSAFGRLVRLTELDLSSCELTHLPASLSRCTSLNKVWLSNNRLTSLPDQI 397

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSL 287
           G+L +L  L + +N LK +      L+L    ++ + L
Sbjct: 398 GRLHRLKELHVRNNPLKYFPASLSYLQLYTFSVNQDKL 435



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 7/226 (3%)

Query: 96  LDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE 154
           +D+S+ ++   P  IG     L   + S+N+L  LP  +G    L       NC+  LP+
Sbjct: 198 VDISYMNLKCCPQLIGYVGRQLTVLNLSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLPK 257

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
            + + S + +LD + N L  L + L    ++L  L  + NLL  +  +IG L+ L  L  
Sbjct: 258 CIGNFSHLQELDCKNNHLQSLPSTL-GRLSILVILNVTNNLLTELTGSIGQLTHLEELCA 316

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           H N++ S+P  +    +L   Y+G N L +LP+  G+L +L  LDL S +L    + A  
Sbjct: 317 HSNQLTSLPDEMCNLVNLTALYVGENHLRSLPSAFGRLVRLTELDLSSCELTH--LPASL 374

Query: 275 LRLSVLD---LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            R + L+   LSNN L+ LP +IG++  L++L +  NPL+   +SL
Sbjct: 375 SRCTSLNKVWLSNNRLTSLPDQIGRLHRLKELHVRNNPLKYFPASL 420



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 112/217 (51%), Gaps = 12/217 (5%)

Query: 14  LNLSNRSLRDVPNEV------YKNFDEAGEGDKWWEAV----DLQKLILAHNNIEKLKED 63
           LNLSN  L  +P E+       + F +    +K  + +     LQ+L   +N+++ L   
Sbjct: 222 LNLSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLPKCIGNFSHLQELDCKNNHLQSLPST 281

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           L  L +L +LNV++N L+EL  +IG+L  L+ L    N +  +PDE+ +   L       
Sbjct: 282 LGRLSILVILNVTNNLLTELTGSIGQLTHLEELCAHSNQLTSLPDEMCNLVNLTALYVGE 341

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N L+ LPS+ GR + L++   S+  +T LP  L+ C+ ++K+ +  N+LT L +  I   
Sbjct: 342 NHLRSLPSAFGRLVRLTELDLSSCELTHLPASLSRCTSLNKVWLSNNRLTSLPDQ-IGRL 400

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
             L EL    N L   P ++  L +L    ++Q+++L
Sbjct: 401 HRLKELHVRNNPLKYFPASLSYL-QLYTFSVNQDKLL 436



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 15/207 (7%)

Query: 196 LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L   P+ IG + R L  L+L  NR++S+P  I     L + ++  N L  LP  +G  S 
Sbjct: 205 LKCCPQLIGYVGRQLTVLNLSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLPKCIGNFSH 264

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LD  +N L+       +L  L +L+++NN L+ L   IG++T L +L    N L +L
Sbjct: 265 LQELDCKNNHLQSLPSTLGRLSILVILNVTNNLLTELTGSIGQLTHLEELCAHSNQLTSL 324

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              + N     L+      + EN      +    L+ +         EL L    L+ +P
Sbjct: 325 PDEMCN-----LVNLTALYVGENHLRSLPSAFGRLVRLT--------ELDLSSCELTHLP 371

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELS 400
           + +     + K+ LS N +  LP ++ 
Sbjct: 372 ASLSRCTSLNKVWLSNNRLTSLPDQIG 398


>gi|260802102|ref|XP_002595932.1| hypothetical protein BRAFLDRAFT_235470 [Branchiostoma floridae]
 gi|229281184|gb|EEN51944.1| hypothetical protein BRAFLDRAFT_235470 [Branchiostoma floridae]
          Length = 467

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 193/433 (44%), Gaps = 50/433 (11%)

Query: 16  LSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV 75
           LSN++L  +P EV+             E  +++ L+L  N++E L  ++  LP L  LNV
Sbjct: 1   LSNKNLETIPQEVF-------------EIKEIEGLLLQDNDLESLPGEIGTLPNLRYLNV 47

Query: 76  SHNK------------------------LSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           S+N                         L ++PA +  L  L  LD+  N +  IPD+I 
Sbjct: 48  SNNHRLEDLPDEVGNAQKLAHISLIHCSLQQIPAVVLSLKGLDILDLDRNKLQSIPDDIS 107

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
           +   L +   + NQL+ LP S+G  +NL     S N +TSLP++L +   + +L +  NK
Sbjct: 108 NLQVLRELWLTGNQLESLPDSIGLLMNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNK 167

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L  L  + I     L  L   +N L  +PE +G +  L+ L L  N + SIP+ I    +
Sbjct: 168 LMTLPAS-IGEMVNLLRLNLEENKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSN 226

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGL 290
           L E  +  N L  LP ++  L  L  L +  N+++E+     +L  L  L  + N ++ L
Sbjct: 227 LEELGLSENKLVKLPEDVCNLENLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIAFL 286

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P +IGK+  LR+L +  N        +++     L    +  L +    E  T   + I 
Sbjct: 287 PRDIGKLRYLRELSIASNEFEDFPEEVLD-----LTSLEKLYLGQWGGGEKFTVIPEEIG 341

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFS 410
              RL V    L L+      +P  I     + +L L  N ++ LP  +S   +L  +  
Sbjct: 342 TLVRLRV----LGLDSNAFRNVPDSIENLRHLRELYLDHNKLEALPDNISFLRNL--RSL 395

Query: 411 DLVTNKESCISGC 423
           D+ TN+   +  C
Sbjct: 396 DVGTNRLKRLPTC 408



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 168/369 (45%), Gaps = 43/369 (11%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N ++ + +D+ NL +L  L ++ N+L  LP +IG L  L+ L +S N +  +
Sbjct: 89  LDILDLDRNKLQSIPDDISNLQVLRELWLTGNQLESLPDSIGLLMNLQKLGLSRNKLTSL 148

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PDE+G+   L +     N+L  LP+S+G  +NL       N +T LPE++     +  L 
Sbjct: 149 PDELGNLLFLRELWLRDNKLMTLPASIGEMVNLLRLNLEENKLTYLPEEMGKMESLLVLR 208

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +EGN L  +    I   + L EL  S+N L  +PE + +L  L  L + +NRI   P  +
Sbjct: 209 LEGNNLRSIPAQ-IGQLSNLEELGLSENKLVKLPEDVCNLENLKELAMGKNRIEEFPEGL 267

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN- 284
           S   +L   +   N ++ LP ++GKL  L  L + SN+ +++  E   L  L  L L   
Sbjct: 268 SRLSNLESLFANQNRIAFLPRDIGKLRYLRELSIASNEFEDFPEEVLDLTSLEKLYLGQW 327

Query: 285 ---NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
                 + +P EIG +  LR L L  N  R +  S+ N      L++LR           
Sbjct: 328 GGGEKFTVIPEEIGTLVRLRVLGLDSNAFRNVPDSIEN------LRHLR----------- 370

Query: 342 STTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                              EL L+   L A+P  I     +  LD+  N ++ LP  L  
Sbjct: 371 -------------------ELYLDHNKLEALPDNISFLRNLRSLDVGTNRLKRLPTCLDK 411

Query: 402 CASLQVKFS 410
              L+ KF+
Sbjct: 412 LTRLK-KFN 419



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 136/278 (48%), Gaps = 6/278 (2%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++LQKL L+ N +  L ++L NL  L  L +  NKL  LPA+IGE+  L  L++  N + 
Sbjct: 133 MNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNKLMTLPASIGEMVNLLRLNLEENKLT 192

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+E+G   +L+      N L+ +P+ +G+  NL +   S N +  LPED+ +   + +
Sbjct: 193 YLPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENKLVKLPEDVCNLENLKE 252

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N++      L +  + L  L A++N +  +P  IG L  L  L +  N     P 
Sbjct: 253 LAMGKNRIEEFPEGL-SRLSNLESLFANQNRIAFLPRDIGKLRYLRELSIASNEFEDFPE 311

Query: 225 SISGCCSLAEFYMGN----NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSV 279
            +    SL + Y+G        + +P E+G L +L  L L SN  +        LR L  
Sbjct: 312 EVLDLTSLEKLYLGQWGGGEKFTVIPEEIGTLVRLRVLGLDSNAFRNVPDSIENLRHLRE 371

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           L L +N L  LP  I  +  LR L +  N L+ L + L
Sbjct: 372 LYLDHNKLEALPDNISFLRNLRSLDVGTNRLKRLPTCL 409



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 123/263 (46%), Gaps = 20/263 (7%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E V+L +L L  N +  L E++  +  L VL +  N L  +PA IG+L  L+ L +S N 
Sbjct: 177 EMVNLLRLNLEENKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENK 236

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           ++K+P+++ +   L +     N+++E P  L R  NL    A+ N I  LP D+     +
Sbjct: 237 LVKLPEDVCNLENLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIAFLPRDIGKLRYL 296

Query: 163 SKLDVEGNK----------LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
            +L +  N+          LT L    +  W               +PE IG+L RL  L
Sbjct: 297 RELSIASNEFEDFPEEVLDLTSLEKLYLGQW-------GGGEKFTVIPEEIGTLVRLRVL 349

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CV 270
            L  N   ++P SI     L E Y+ +N L ALP  +  L  L +LD+ +N+LK    C+
Sbjct: 350 GLDSNAFRNVPDSIENLRHLRELYLDHNKLEALPDNISFLRNLRSLDVGTNRLKRLPTCL 409

Query: 271 EACQLRLSVLDLSNNSLSGLPPE 293
           +    RL   ++  N     PP+
Sbjct: 410 DKLT-RLKKFNVEKNPQLVYPPQ 431


>gi|332026947|gb|EGI67044.1| Protein LAP2 [Acromyrmex echinatior]
          Length = 1016

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 151/305 (49%), Gaps = 14/305 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L++ +L DVP +V+            +E   L+KL L  N I  L   L     L VL
Sbjct: 22  LQLNHCNLYDVPPDVF-----------IYERT-LEKLYLDANRIRDLPRPLFQCHELRVL 69

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N+++ LP AI  L  L+ LD+S NSI ++PD I    +L   D S N  +  P ++
Sbjct: 70  SLSDNEIATLPPAIASLINLEYLDLSKNSIKELPDSIKECKSLRSIDISVNPFERFPDAI 129

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
              + L +   ++  I  LP +    S +  L++  N +  L  ++ +    L  L    
Sbjct: 130 THIVGLRELYINDAYIEYLPANFGRLSALRTLELRENNMMTLPKSM-SRLVNLQRLDIGN 188

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N    +PE +G L  L  L +  N I  +P+++     L  F    NA+ ALP E+    
Sbjct: 189 NDFTELPEVVGDLINLTELWIDGNDIRRVPANVEQLYRLNHFDCTMNAIHALPMEIRGWR 248

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +G ++L SN++ E     C LR  V L + +N L+ LP +IG+M++L +L++T N L  
Sbjct: 249 DIGIMNLSSNEMYELPDTLCYLRTIVTLKIDDNQLNALPNDIGQMSSLEELIITKNFLEY 308

Query: 313 LRSSL 317
           L SS+
Sbjct: 309 LPSSI 313



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 107/220 (48%), Gaps = 1/220 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+LQ+L + +N+  +L E + +L  LT L +  N +  +PA + +L+ L   D + N+I 
Sbjct: 179 VNLQRLDIGNNDFTELPEVVGDLINLTELWIDGNDIRRVPANVEQLYRLNHFDCTMNAIH 238

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EI     +   + SSN++ ELP +L     +   K  +N + +LP D+   S + +
Sbjct: 239 ALPMEIRGWRDIGIMNLSSNEMYELPDTLCYLRTIVTLKIDDNQLNALPNDIGQMSSLEE 298

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N L  L ++ I     L  L A  N L  +P  IGS + L  L L  N +  +P 
Sbjct: 299 LIITKNFLEYLPSS-IGLLRKLHCLNADNNYLRALPAEIGSCTSLSLLSLRSNNLTRVPP 357

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            +    SL    + NN +  LP  +  LS L  L L  NQ
Sbjct: 358 ELGHLSSLRVLNLVNNCIKFLPVSMLNLSNLKALWLSDNQ 397


>gi|443692532|gb|ELT94125.1| hypothetical protein CAPTEDRAFT_139593, partial [Capitella teleta]
          Length = 549

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/259 (34%), Positives = 125/259 (48%), Gaps = 7/259 (2%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D++     L  L L+HN I  L     ++  L  LN+SHNK   + A  G L   + LD+
Sbjct: 292 DEFCMFKKLTTLDLSHNEINLLPPKFEDMKTLKKLNLSHNKFRNVSALSG-LRNCEDLDL 350

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N+I  +P +I    ALV  D S N +K +P S+GR   L   K +NN +T+LP+ L D
Sbjct: 351 SSNAIDLLPSDIDKMKALVNLDISDNAIKTIPDSIGRIRTLKMIKMANNSVTTLPDTLGD 410

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL-----LNGMPETIGSLSRLIRLD 213
              +  +D   N L  L  ++     M T L++   L     L   P  IG+L  L  LD
Sbjct: 411 DQIIIYIDATNNGLEALPADMRKLRNMETLLLSQNQLSAFLQLEEFPAAIGNLKMLQNLD 470

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L  N +  +        +LA   + NN L A P ++  L KL  LD  +NQ+ E+  E  
Sbjct: 471 LSNNLLKKLSDKFFKLKNLARLIIKNNTLQAFPDDISTLKKLKYLDASNNQITEFTKEMT 530

Query: 274 QL-RLSVLDLSNNSLSGLP 291
           QL  L  +DLS N L  LP
Sbjct: 531 QLSELEFIDLSENQLQTLP 549



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 205/438 (46%), Gaps = 48/438 (10%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAGEGD--------KWWEAVDLQKLILAHNNIEKLKED 63
           L++S+ +LR +P  ++K     E    +        K   A  L  + L++N I+ LK++
Sbjct: 120 LDISSNTLRSLPATIHKASGLTEIKAANNRLKTVPAKLGTAPSLVSIDLSNNIIKSLKKN 179

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  LPL   LNVSHNKL +LPA   +   + S+DVS+N + ++P+ I +   L   D S 
Sbjct: 180 IYKLPL--TLNVSHNKLKDLPAVSVKNPCIHSMDVSYNQLEQLPNGIENLLCLTSLDVSH 237

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS-KMSKLDVEGNKLTVLSNNLIAS 182
           N+L ELP  LG    ++    S+N +  L  +L +    M++L +  N L  L +     
Sbjct: 238 NELTELPPQLGLVKYMTHLDISHNKLKFLNPELCNLQFAMTQLYISHNSLETLPDEF-CM 296

Query: 183 WTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNAL 242
           +  LT L  S N +N +P     +  L +L+L  N+  ++ S++SG  +  +  + +NA+
Sbjct: 297 FKKLTTLDLSHNEINLLPPKFEDMKTLKKLNLSHNKFRNV-SALSGLRNCEDLDLSSNAI 355

Query: 243 SALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR------------------------LS 278
             LP+++ K+  L  LD+  N +K       ++R                        + 
Sbjct: 356 DLLPSDIDKMKALVNLDISDNAIKTIPDSIGRIRTLKMIKMANNSVTTLPDTLGDDQIII 415

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            +D +NN L  LP ++ K+  +  LLL+ N L      L     PA +  L  ++ +N D
Sbjct: 416 YIDATNNGLEALPADMRKLRNMETLLLSQNQLSAF---LQLEEFPAAIGNL--KMLQNLD 470

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
              +  K+ L     +L   ++ L ++   L A P +I    ++  LD S N I E   E
Sbjct: 471 LSNNLLKK-LSDKFFKLKNLAR-LIIKNNTLQAFPDDISTLKKLKYLDASNNQITEFTKE 528

Query: 399 LSSCASLQVKFSDLVTNK 416
           ++  + L+  F DL  N+
Sbjct: 529 MTQLSELE--FIDLSENQ 544



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/420 (24%), Positives = 179/420 (42%), Gaps = 97/420 (23%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LN S  S++++P E+Y+N +  G                                   +
Sbjct: 46  QLNWSTTSVKNLPKEIYQNEEIQG--------------------------------FARI 73

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L   +N+L ++P A+  L  L+++D+  N+I K+P  I    AL   D SSN L+ LP++
Sbjct: 74  LEAPNNRLKKVPGAVSALKELENIDLKNNTISKLPGSISRLKALNYLDISSNTLRSLPAT 133

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +   L++ KA+NN + ++P  L     +  +D+  N +  L  N+   + +   L  S
Sbjct: 134 IHKASGLTEIKAANNRLKTVPAKLGTAPSLVSIDLSNNIIKSLKKNI---YKLPLTLNVS 190

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N L  +P        +  +D+  N++  +P+ I     L    + +N L+ LP +LG +
Sbjct: 191 HNKLKDLPAVSVKNPCIHSMDVSYNQLEQLPNGIENLLCLTSLDVSHNELTELPPQLGLV 250

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-------------------------RLSVLDLSNNSL 287
             +  LD+  N+LK    E C L                         +L+ LDLS+N +
Sbjct: 251 KYMTHLDISHNKLKFLNPELCNLQFAMTQLYISHNSLETLPDEFCMFKKLTTLDLSHNEI 310

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
           + LPP+   M TL+KL L+ N  R + +          L  LR+     ED + S+   D
Sbjct: 311 NLLPPKFEDMKTLKKLNLSHNKFRNVSA----------LSGLRNC----EDLDLSSNAID 356

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           L                       +PS+I +   +  LD+S N+I+ +P  +    +L++
Sbjct: 357 L-----------------------LPSDIDKMKALVNLDISDNAIKTIPDSIGRIRTLKM 393


>gi|323453411|gb|EGB09283.1| hypothetical protein AURANDRAFT_24947, partial [Aureococcus
           anophagefferens]
          Length = 318

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 133/281 (47%), Gaps = 7/281 (2%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E    L  LT LN+ ++ L+ LP + G L  L  L++  N++  +P+  G   +LV  
Sbjct: 1   LPESFGGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTL 60

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
             + N L  LP S G   +L      NN + SLPE     S + +L + GN L  L  + 
Sbjct: 61  FLNDNALASLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPES- 119

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
                 L  L    N L  +PE+ G L  L+ L+LH N + S+P S      L   Y+  
Sbjct: 120 FGDLASLVTLYLHNNALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHE 179

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           NAL++LP   G L +L TL+L++N L         L  L  L L++N+L+ LP   G + 
Sbjct: 180 NALASLPESFGDLERLTTLNLYNNALASLPESFGDLASLVTLYLNDNALASLPESFGGLE 239

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR----SRLPE 335
           +L  L L  N L +L  S   G    +  YLR    + LPE
Sbjct: 240 SLEHLDLNDNALASLPESF-GGLASLVTLYLRNNALASLPE 279



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 123/270 (45%), Gaps = 23/270 (8%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           + +     L+ L+L +N +  L E    L  L  L +  N L+ LP + G+L  L +L +
Sbjct: 72  ESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESFGDLASLVTLYL 131

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N++  +P+  G   +LV  +  +N LK LP S G    L       N + SLPE   D
Sbjct: 132 HNNALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHENALASLPESFGD 191

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             +++ L++  N L  L  +       L  L  + N L  +PE+ G L  L  LDL+ N 
Sbjct: 192 LERLTTLNLYNNALASLPES-FGDLASLVTLYLNDNALASLPESFGGLESLEHLDLNDNA 250

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 278
           + S+P S  G  SL   Y+ NNAL++LP   G LS L TL+L                  
Sbjct: 251 LASLPESFGGLASLVTLYLRNNALASLPESFGDLSSLVTLELR----------------- 293

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
                NN+L+ LP   G + +L  L L  N
Sbjct: 294 -----NNTLTSLPESFGGLESLVTLYLNDN 318



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 130/272 (47%), Gaps = 2/272 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L ++ +  L E    L  L  LN+ +N L+ LP + G+L  L +L ++ N++  +
Sbjct: 11  LTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTLFLNDNALASL 70

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+  G   +L      +N L  LP S G   +L + +   N + SLPE   D + +  L 
Sbjct: 71  PESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESFGDLASLVTLY 130

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N L  L  +       L  L    N L  +PE+ G L+ L+ L LH+N + S+P S 
Sbjct: 131 LHNNALASLPES-FGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHENALASLPESF 189

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
                L    + NNAL++LP   G L+ L TL L+ N L         L  L  LDL++N
Sbjct: 190 GDLERLTTLNLYNNALASLPESFGDLASLVTLYLNDNALASLPESFGGLESLEHLDLNDN 249

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           +L+ LP   G + +L  L L  N L +L  S 
Sbjct: 250 ALASLPESFGGLASLVTLYLRNNALASLPESF 281



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 152/351 (43%), Gaps = 61/351 (17%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP + G L  L +L++  +++  +P+  G   +LV+ +  +N L  LP S G   +L   
Sbjct: 1   LPESFGGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTL 60

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             ++N + SLPE     + +  L        +L NN +AS                +PE+
Sbjct: 61  FLNDNALASLPESFGGLASLEYL--------MLYNNALAS----------------LPES 96

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
            G LS L+ L L  N + S+P S     SL   Y+ NNAL++LP   G+L  L TL+LH+
Sbjct: 97  FGGLSSLVELRLGGNALASLPESFGDLASLVTLYLHNNALASLPESFGELESLVTLNLHT 156

Query: 263 NQLKEYCVEACQL------------------------RLSVLDLSNNSLSGLPPEIGKMT 298
           N LK        L                        RL+ L+L NN+L+ LP   G + 
Sbjct: 157 NALKSLPESFGDLAILVTLYLHENALASLPESFGDLERLTTLNLYNNALASLPESFGDLA 216

Query: 299 TLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT 358
           +L  L L  N L +L  S   G   +L       L  N+++ AS   E    +A+ ++  
Sbjct: 217 SLVTLYLNDNALASLPESF--GGLESL-----EHLDLNDNALAS-LPESFGGLASLVT-- 266

Query: 359 SKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
              L L    L+++P    +   +  L+L  N++  LP       SL   +
Sbjct: 267 ---LYLRNNALASLPESFGDLSSLVTLELRNNTLTSLPESFGGLESLVTLY 314



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 37/205 (18%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL   +L+ +P             + + +   L  L L  N +  L E   +L  LT 
Sbjct: 151 TLNLHTNALKSLP-------------ESFGDLAILVTLYLHENALASLPESFGDLERLTT 197

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+ +N L+ LP + G+L  L +L ++ N++  +P+  G   +L   D + N L  LP S
Sbjct: 198 LNLYNNALASLPESFGDLASLVTLYLNDNALASLPESFGGLESLEHLDLNDNALASLPES 257

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
            G   +L      NN + SLPE   D S +  L++  N LT L                 
Sbjct: 258 FGGLASLVTLYLRNNALASLPESFGDLSSLVTLELRNNTLTSL----------------- 300

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQN 217
                  PE+ G L  L+ L L+ N
Sbjct: 301 -------PESFGGLESLVTLYLNDN 318


>gi|72080205|ref|XP_792673.1| PREDICTED: uncharacterized protein LOC587871 [Strongylocentrotus
           purpuratus]
          Length = 548

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/218 (34%), Positives = 121/218 (55%), Gaps = 1/218 (0%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           LTVLN+S+N+L  LP  IG L  L+ L + +N + K+P  IG+ + L + DC +N L+ L
Sbjct: 219 LTVLNLSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLPKCIGNFSHLQELDCKNNHLQSL 278

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           PS+LGR   L     +NN +T L   +   + + +L    N+LT L + +  +   LT L
Sbjct: 279 PSTLGRLSILVILNVTNNLLTELTGSIGQLTHLEELCAHSNQLTSLPDEM-CNLVNLTAL 337

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
              +N L  +P   G L RL  LDL    +  +P+S+S C SL + ++ NN L++LP ++
Sbjct: 338 YVGENHLRSLPSAFGRLVRLTELDLSSCELTHLPASLSRCTSLNKVWLSNNRLTSLPDQI 397

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSL 287
           G+L +L  L + +N LK +      L+L    ++ + L
Sbjct: 398 GRLHRLKELHVRNNPLKYFPASLSYLQLYTFSVNQDKL 435



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 118/226 (52%), Gaps = 7/226 (3%)

Query: 96  LDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE 154
           +D+S+ ++   P  IG     L   + S+N+L  LP  +G    L       NC+  LP+
Sbjct: 198 VDISYMNLKCCPQLIGYVGRQLTVLNLSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLPK 257

Query: 155 DLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDL 214
            + + S + +LD + N L  L + L    ++L  L  + NLL  +  +IG L+ L  L  
Sbjct: 258 CIGNFSHLQELDCKNNHLQSLPSTL-GRLSILVILNVTNNLLTELTGSIGQLTHLEELCA 316

Query: 215 HQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           H N++ S+P  +    +L   Y+G N L +LP+  G+L +L  LDL S +L    + A  
Sbjct: 317 HSNQLTSLPDEMCNLVNLTALYVGENHLRSLPSAFGRLVRLTELDLSSCELTH--LPASL 374

Query: 275 LRLSVLD---LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            R + L+   LSNN L+ LP +IG++  L++L +  NPL+   +SL
Sbjct: 375 SRCTSLNKVWLSNNRLTSLPDQIGRLHRLKELHVRNNPLKYFPASL 420



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 12/227 (5%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEV------YKNFDEAGEGDKWWEAV----DLQKLILA 53
           I    R    LNLSN  L  +P E+       + F +    +K  + +     LQ+L   
Sbjct: 212 IGYVGRQLTVLNLSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLPKCIGNFSHLQELDCK 271

Query: 54  HNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           +N+++ L   L  L +L +LNV++N L+EL  +IG+L  L+ L    N +  +PDE+ + 
Sbjct: 272 NNHLQSLPSTLGRLSILVILNVTNNLLTELTGSIGQLTHLEELCAHSNQLTSLPDEMCNL 331

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L       N L+ LPS+ GR + L++   S+  +T LP  L+ C+ ++K+ +  N+LT
Sbjct: 332 VNLTALYVGENHLRSLPSAFGRLVRLTELDLSSCELTHLPASLSRCTSLNKVWLSNNRLT 391

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            L +  I     L EL    N L   P ++  L +L    ++Q+++L
Sbjct: 392 SLPDQ-IGRLHRLKELHVRNNPLKYFPASLSYL-QLYTFSVNQDKLL 436



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 15/207 (7%)

Query: 196 LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L   P+ IG + R L  L+L  NR++S+P  I     L + ++  N L  LP  +G  S 
Sbjct: 205 LKCCPQLIGYVGRQLTVLNLSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLPKCIGNFSH 264

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LD  +N L+       +L  L +L+++NN L+ L   IG++T L +L    N L +L
Sbjct: 265 LQELDCKNNHLQSLPSTLGRLSILVILNVTNNLLTELTGSIGQLTHLEELCAHSNQLTSL 324

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
              + N     L+      + EN      +    L+ +         EL L    L+ +P
Sbjct: 325 PDEMCN-----LVNLTALYVGENHLRSLPSAFGRLVRLT--------ELDLSSCELTHLP 371

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELS 400
           + +     + K+ LS N +  LP ++ 
Sbjct: 372 ASLSRCTSLNKVWLSNNRLTSLPDQIG 398


>gi|327403778|ref|YP_004344616.1| adenylate cyclase [Fluviicola taffensis DSM 16823]
 gi|327319286|gb|AEA43778.1| Adenylate cyclase [Fluviicola taffensis DSM 16823]
          Length = 540

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 180/370 (48%), Gaps = 13/370 (3%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           +E  +L+ L L++NNI+ + + ++ LP++  L++S NK+  LP +   L  LK L +S N
Sbjct: 60  FEMKNLRSLNLSNNNIKYIPDSIQLLPMIEYLDLSGNKIGTLPNSFWSLTSLKELSLSKN 119

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +   IG+   LV  + S N+L  LP  +G    L     +NN ++SLP+   +   
Sbjct: 120 DLSSLSGLIGTLNQLVSLELSGNRLNTLPREIGLLTQLKKIDLTNNNLSSLPKSFGELKD 179

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELI---ASKNLLNGMPETIGSLSRLIRLDLHQNR 218
           + ++ +  N+++ +S     SW  L +L    A  N L  +P  I  L  L  L L  N+
Sbjct: 180 LEEIFIAHNRISKVS----KSWCRLRQLKIMDAGNNRLKKLPNQIVQLQLLSVLLLDSNQ 235

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-L 277
           ++ +P S     +L+  Y+ +N+L  LP    KL  + +L++  N++        ++R L
Sbjct: 236 LVCLPKSFGQLENLSGIYLQHNSLKLLPESFTKLHLITSLEISENRITRLLSSLSEMRNL 295

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             +  SNN LS LP  I KM TL  + L  N   T   SL+   +  +L   ++ L    
Sbjct: 296 RQIYASNNLLSTLPDSIEKMKTLMIVKLDHNQFSTFPESLLKSKSIIVLDLQQNGLKHVP 355

Query: 338 DSEASTTK-EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           +   S T   DL      +S   KE+ L     ++I S +  A E+ +LDLS   +Q LP
Sbjct: 356 ELHLSMTNLADLYLDQFPISEAIKEIKL----YTSIDSALKYANEVYRLDLSYQKLQRLP 411

Query: 397 PELSSCASLQ 406
               S + L+
Sbjct: 412 ESFGSLSELR 421



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 14/282 (4%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  + L HN+++ L E    L L+T L +S N+++ L +++ E+  L+ +  S N +  
Sbjct: 248 NLSGIYLQHNSLKLLPESFTKLHLITSLEISENRITRLLSSLSEMRNLRQIYASNNLLST 307

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE------DLADC 159
           +PD I     L+      NQ    P SL +  ++       N +  +PE      +LAD 
Sbjct: 308 LPDSIEKMKTLMIVKLDHNQFSTFPESLLKSKSIIVLDLQQNGLKHVPELHLSMTNLADL 367

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIA---SKNLLNGMPETIGSLSRLIRLDLHQ 216
                   E  K   L  ++ ++     E+     S   L  +PE+ GSLS L  L+L+ 
Sbjct: 368 YLDQFPISEAIKEIKLYTSIDSALKYANEVYRLDLSYQKLQRLPESFGSLSELRWLNLNY 427

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR 276
           NR+  +P S      L    +  N L  + + +  L  L  L L+ N+L    V  C ++
Sbjct: 428 NRLSELPESFKDLNKLKSLSIVANGLETIDSAICYLDALEELQLNGNKLS--FVPDCIVQ 485

Query: 277 LS---VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
           L+     +L  N +  LP    ++  L+ L+L GN L+  R+
Sbjct: 486 LNNLETFNLQQNYIEQLPDSFFELKNLKTLILYGNNLKHYRA 527



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 67/129 (51%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           A ++ +L L++  +++L E   +L  L  LN+++N+LSELP +  +L+ LKSL +  N +
Sbjct: 394 ANEVYRLDLSYQKLQRLPESFGSLSELRWLNLNYNRLSELPESFKDLNKLKSLSIVANGL 453

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
             I   I    AL +   + N+L  +P  + +  NL  F    N I  LP+   +   + 
Sbjct: 454 ETIDSAICYLDALEELQLNGNKLSFVPDCIVQLNNLETFNLQQNYIEQLPDSFFELKNLK 513

Query: 164 KLDVEGNKL 172
            L + GN L
Sbjct: 514 TLILYGNNL 522



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 32/161 (19%)

Query: 189 LIASKNLLNG--------MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           L AS N LN         + E + +  ++  L L  + +   PSSI    +L    + NN
Sbjct: 14  LYASSNTLNAQIKKIYYSLEEALKNKDQVYHLSLKGHVLNEFPSSIFEMKNLRSLNLSNN 73

Query: 241 ALSALPAELGKLSKLGTLDLHSNQ-------------LKEYCVEACQL-----------R 276
            +  +P  +  L  +  LDL  N+             LKE  +    L           +
Sbjct: 74  NIKYIPDSIQLLPMIEYLDLSGNKIGTLPNSFWSLTSLKELSLSKNDLSSLSGLIGTLNQ 133

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           L  L+LS N L+ LP EIG +T L+K+ LT N L +L  S 
Sbjct: 134 LVSLELSGNRLNTLPREIGLLTQLKKIDLTNNNLSSLPKSF 174



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 20/170 (11%)

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSS 316
           L L  + L E+     +++ L  L+LSNN++  +P  I  +  +  L L+GN + TL +S
Sbjct: 45  LSLKGHVLNEFPSSIFEMKNLRSLNLSNNNIKYIPDSIQLLPMIEYLDLSGNKIGTLPNS 104

Query: 317 LVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLE--GMNLSAIPS 374
             +  +   LK            E S +K DL +++  +   ++ +SLE  G  L+ +P 
Sbjct: 105 FWSLTS---LK------------ELSLSKNDLSSLSGLIGTLNQLVSLELSGNRLNTLPR 149

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISGCY 424
           EI    ++ K+DL+ N++  LP        L+  F  +  N+ S +S  +
Sbjct: 150 EIGLLTQLKKIDLTNNNLSSLPKSFGELKDLEEIF--IAHNRISKVSKSW 197


>gi|307204168|gb|EFN83009.1| Protein lap4 [Harpegnathos saltator]
          Length = 1538

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 170/352 (48%), Gaps = 35/352 (9%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--DLQ------KLI 51
           D IL+ +R+   L L    +RD+P   ++     + G  D     +  D+Q      +L 
Sbjct: 30  DDILRYSRSLEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEINRLPPDIQNFENLVELD 89

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           ++ N+I  + E+++NL  L V + S N +  LPA   +L  L  L ++  S+  +P + G
Sbjct: 90  VSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFG 149

Query: 112 SATALVKFDCSSNQLKELPSSL-----------------------GRCLNLSDFKASNNC 148
           S  AL   +   N L+ LP SL                       G+   L +    +N 
Sbjct: 150 SLEALQSLELRENLLRSLPESLSQLFKLERLDLGDNEIEELPAHVGKLPALQELWLDHNQ 209

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +  LP ++ +   ++ LDV  N+L  L N  I     LT+L  S+N++  +P+ +G L +
Sbjct: 210 LQHLPPEIGELKTLACLDVSENRLEDLPNE-IGGLESLTDLHLSQNVIEKLPDGLGELKK 268

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L + QNR+ ++  +I  C +L E  +  N L  LP  +GKL  L  L++  N ++  
Sbjct: 269 LTILKVDQNRLSTLNPNIGRCENLQELILTENFLLELPVSIGKLHNLNNLNVDRNSVQSL 328

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +E   L +L VL L +N L  LP E+G+ + L  L ++GN L+ L  SL+N
Sbjct: 329 PIEIGNLKKLGVLSLRDNKLQYLPTEVGQCSALHVLDVSGNRLQYLPYSLIN 380



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 126/239 (52%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N +  L E L  L  L  L++  N++ ELPA +G+L  L+ L +  N +  +
Sbjct: 154 LQSLELRENLLRSLPESLSQLFKLERLDLGDNEIEELPAHVGKLPALQELWLDHNQLQHL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L   D S N+L++LP+ +G   +L+D   S N I  LP+ L +  K++ L 
Sbjct: 214 PPEIGELKTLACLDVSENRLEDLPNEIGGLESLTDLHLSQNVIEKLPDGLGELKKLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L+ L+ N I     L ELI ++N L  +P +IG L  L  L++ +N + S+P  I
Sbjct: 274 VDQNRLSTLNPN-IGRCENLQELILTENFLLELPVSIGKLHNLNNLNVDRNSVQSLPIEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
                L    + +N L  LP E+G+ S L  LD+  N+L+        L L  + LS N
Sbjct: 333 GNLKKLGVLSLRDNKLQYLPTEVGQCSALHVLDVSGNRLQYLPYSLINLSLKAVWLSEN 391



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 166/374 (44%), Gaps = 61/374 (16%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L+L  N+I  L ++   L  L  L +S N+++ LP  I     L  LDVS N I  I
Sbjct: 39  LEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEINRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ I +  AL   D SSN +  LP+   +  NL+    ++  +T+LP D      +  L+
Sbjct: 99  PENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLE 158

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +                         +NLL  +PE++  L +L RLDL  N I  +P+ +
Sbjct: 159 LR------------------------ENLLRSLPESLSQLFKLERLDLGDNEIEELPAHV 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----------- 275
               +L E ++ +N L  LP E+G+L  L  LD+  N+L++   E   L           
Sbjct: 195 GKLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPNEIGGLESLTDLHLSQN 254

Query: 276 -------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
                        +L++L +  N LS L P IG+   L++L+LT N L  L         
Sbjct: 255 VIEKLPDGLGELKKLTILKVDQNRLSTLNPNIGRCENLQELILTENFLLEL--------- 305

Query: 323 PALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEI 382
           P  +  L +    N D  +  +    I    +L V    LSL    L  +P+E+ +   +
Sbjct: 306 PVSIGKLHNLNNLNVDRNSVQSLPIEIGNLKKLGV----LSLRDNKLQYLPTEVGQCSAL 361

Query: 383 TKLDLSRNSIQELP 396
             LD+S N +Q LP
Sbjct: 362 HVLDVSGNRLQYLP 375



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 15/261 (5%)

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N I  LP++     ++ KL +  N++  L  + I ++  L EL  S+N +  +PE I +L
Sbjct: 47  NHIRDLPKNFFRLQRLRKLGLSDNEINRLPPD-IQNFENLVELDVSRNDIPDIPENIKNL 105

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L   D   N I  +P+      +L    + + +L+ LP + G L  L +L+L  N L+
Sbjct: 106 RALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLR 165

Query: 267 EYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
                  QL +L  LDL +N +  LP  +GK+  L++L L  N L+ L   +    T A 
Sbjct: 166 SLPESLSQLFKLERLDLGDNEIEELPAHVGKLPALQELWLDHNQLQHLPPEIGELKTLAC 225

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           L    +RL            EDL      L   + +L L    +  +P  + E  ++T L
Sbjct: 226 LDVSENRL------------EDLPNEIGGLESLT-DLHLSQNVIEKLPDGLGELKKLTIL 272

Query: 386 DLSRNSIQELPPELSSCASLQ 406
            + +N +  L P +  C +LQ
Sbjct: 273 KVDQNRLSTLNPNIGRCENLQ 293


>gi|426360965|ref|XP_004047698.1| PREDICTED: protein scribble homolog isoform 1 [Gorilla gorilla
           gorilla]
          Length = 1643

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 167/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTH 379



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|426360967|ref|XP_004047699.1| PREDICTED: protein scribble homolog isoform 2 [Gorilla gorilla
           gorilla]
          Length = 1668

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 167/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTH 379



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|414869438|tpg|DAA47995.1| TPA: hypothetical protein ZEAMMB73_132219 [Zea mays]
          Length = 577

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 135/278 (48%), Gaps = 4/278 (1%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N IE L + +  L  L  L++S N++  LP AIG L  L  LD+  N I ++P+ IG  +
Sbjct: 260 NQIEWLPDSIGKLTGLVTLDISENRILALPEAIGMLSSLAKLDLHANRIAQLPESIGDLS 319

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L+  D   NQL  LP+SLGR + L +   S N +TSLP+ +   +++ KL  E N L  
Sbjct: 320 NLIYLDLRGNQLASLPASLGRLVKLEELDVSANHLTSLPDSIGSLTRLKKLIAETNDLDE 379

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I +   L EL    N L  +PE +G L  L  L +  N I  +P++++    L E
Sbjct: 380 LPYT-IGNCVSLVELRVGYNHLKALPEAVGKLESLEVLSVRYNTIRGLPTTMASLTKLKE 438

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSN--QLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
                N L ++P     ++ L  L++ +N   L+        L  L  LD+SNN +  LP
Sbjct: 439 VDASFNELESIPENFCFVTSLIKLNVGNNFADLQSLPRSIGNLEMLEELDISNNQIRVLP 498

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
              G +  LR L    NPL+     +      A ++Y+
Sbjct: 499 DSFGNLQRLRVLRAEENPLQVPPRDVALKGAQAAVQYM 536



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 117/222 (52%), Gaps = 3/222 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L KL L  N I +L E + +L  L  L++  N+L+ LPA++G L  L+ LDVS N +  +
Sbjct: 298 LAKLDLHANRIAQLPESIGDLSNLIYLDLRGNQLASLPASLGRLVKLEELDVSANHLTSL 357

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IGS T L K    +N L ELP ++G C++L + +   N + +LPE +     +  L 
Sbjct: 358 PDSIGSLTRLKKLIAETNDLDELPYTIGNCVSLVELRVGYNHLKALPEAVGKLESLEVLS 417

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN--RILSIPS 224
           V  N +  L   + AS T L E+ AS N L  +PE    ++ LI+L++  N   + S+P 
Sbjct: 418 VRYNTIRGLPTTM-ASLTKLKEVDASFNELESIPENFCFVTSLIKLNVGNNFADLQSLPR 476

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           SI     L E  + NN +  LP   G L +L  L    N L+
Sbjct: 477 SIGNLEMLEELDISNNQIRVLPDSFGNLQRLRVLRAEENPLQ 518



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 37/214 (17%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +P++IG L+ L+ LD+ +NRIL++P +I    SLA+  +  N ++ LP  +G LS
Sbjct: 260 NQIEWLPDSIGKLTGLVTLDISENRILALPEAIGMLSSLAKLDLHANRIAQLPESIGDLS 319

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  LDL  NQL        +L +L  LD+S N L+ LP  IG +T L+KL+   N L  
Sbjct: 320 NLIYLDLRGNQLASLPASLGRLVKLEELDVSANHLTSLPDSIGSLTRLKKLIAETNDLDE 379

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L  ++ N                                     V+  EL +   +L A+
Sbjct: 380 LPYTIGN------------------------------------CVSLVELRVGYNHLKAL 403

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           P  + +   +  L +  N+I+ LP  ++S   L+
Sbjct: 404 PEAVGKLESLEVLSVRYNTIRGLPTTMASLTKLK 437



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 8/214 (3%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L ++ N++  L + + +L  L  L    N L ELP  IG    L  L V +N + 
Sbjct: 342 VKLEELDVSANHLTSLPDSIGSLTRLKKLIAETNDLDELPYTIGNCVSLVELRVGYNHLK 401

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+ +G   +L       N ++ LP+++     L +  AS N + S+PE+    + + K
Sbjct: 402 ALPEAVGKLESLEVLSVRYNTIRGLPTTMASLTKLKEVDASFNELESIPENFCFVTSLIK 461

Query: 165 LDVEGNKLTVLSN--NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           L+V GN    L +    I +  ML EL  S N +  +P++ G+L RL  L   +N +   
Sbjct: 462 LNV-GNNFADLQSLPRSIGNLEMLEELDISNNQIRVLPDSFGNLQRLRVLRAEENPLQVP 520

Query: 223 PSSIS--GCCSLAEF---YMGNNALSALPAELGK 251
           P  ++  G  +  ++   Y+   A  + P +  K
Sbjct: 521 PRDVALKGAQAAVQYMAEYVAKKATRSQPMKTKK 554


>gi|332023058|gb|EGI63323.1| Protein lap4 [Acromyrmex echinatior]
          Length = 2051

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 168/352 (47%), Gaps = 35/352 (9%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK--NFDEAGEGDKWWEAV--DLQ------KLI 51
           D IL+ +R+   L L    +RD+P   ++     + G  D     +  D+Q      +L 
Sbjct: 30  DDILRYSRSLEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELD 89

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           ++ N+I  + E+++NL  L V + S N +  LPA   +L  L  L ++  S+  +P + G
Sbjct: 90  VSRNDIPDIPENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPSDFG 149

Query: 112 SATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCI---------------------- 149
           S  AL   +   N LK LP SL + L L      +N I                      
Sbjct: 150 SLEALQSLELRENLLKSLPESLSQLLKLERLDLGDNEIEELPAHIGQLPALQELWLDHNQ 209

Query: 150 -TSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
              LP ++ +   ++ LDV  N+L  L +  I     LT+L  S+N++  +P+ +G L +
Sbjct: 210 LQHLPPEIGELKTLACLDVSENRLEDLPDE-IGGLESLTDLHLSQNVIEKLPDGLGELKK 268

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L  L + QNR+ ++  +I  C +L E  +  N L  LP  +GKL  L  L++  N L+  
Sbjct: 269 LTILKIDQNRLSTLNPNIGRCENLQELILTENFLLELPLSIGKLYNLNNLNVDRNSLQSL 328

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +E   L +L VL L +N L  LP E+G+ + L  L ++GN L  L  SL+N
Sbjct: 329 PIEIGNLKKLGVLSLRDNKLQYLPIEVGQCSALHVLDVSGNRLHYLPYSLIN 380



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 125/239 (52%), Gaps = 1/239 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L E L  L  L  L++  N++ ELPA IG+L  L+ L +  N +  +
Sbjct: 154 LQSLELRENLLKSLPESLSQLLKLERLDLGDNEIEELPAHIGQLPALQELWLDHNQLQHL 213

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P EIG    L   D S N+L++LP  +G   +L+D   S N I  LP+ L +  K++ L 
Sbjct: 214 PPEIGELKTLACLDVSENRLEDLPDEIGGLESLTDLHLSQNVIEKLPDGLGELKKLTILK 273

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L+ L+ N I     L ELI ++N L  +P +IG L  L  L++ +N + S+P  I
Sbjct: 274 IDQNRLSTLNPN-IGRCENLQELILTENFLLELPLSIGKLYNLNNLNVDRNSLQSLPIEI 332

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
                L    + +N L  LP E+G+ S L  LD+  N+L         L L  + LS N
Sbjct: 333 GNLKKLGVLSLRDNKLQYLPIEVGQCSALHVLDVSGNRLHYLPYSLINLNLKAVWLSEN 391



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 169/366 (46%), Gaps = 46/366 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L+L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ I +  AL   D SSN +  LP+   +  NL+    ++  +T+LP D      +  L+
Sbjct: 99  PENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPSDFGSLEALQSLE 158

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +                         +NLL  +PE++  L +L RLDL  N I  +P+ I
Sbjct: 159 LR------------------------ENLLKSLPESLSQLLKLERLDLGDNEIEELPAHI 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L E ++ +N L  LP E+G+L  L  LD+  N+L++   E   L  L+ L LS N
Sbjct: 195 GQLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPDEIGGLESLTDLHLSQN 254

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            +  LP  +G++  L  L +  N L TL  ++  G    L + +   L EN         
Sbjct: 255 VIEKLPDGLGELKKLTILKIDQNRLSTLNPNI--GRCENLQELI---LTEN--------- 300

Query: 346 EDLITMATRLSVTS----KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
                +   LS+        L+++  +L ++P EI    ++  L L  N +Q LP E+  
Sbjct: 301 ---FLLELPLSIGKLYNLNNLNVDRNSLQSLPIEIGNLKKLGVLSLRDNKLQYLPIEVGQ 357

Query: 402 CASLQV 407
           C++L V
Sbjct: 358 CSALHV 363



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 131/303 (43%), Gaps = 39/303 (12%)

Query: 106 IPDEI-GSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           +PD+I   + +L +    +N +++LP +  R   L     S+N I  LP D+ +   + +
Sbjct: 28  VPDDILRYSRSLEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVE 87

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LDV                        S+N +  +PE I +L  L   D   N I  +P+
Sbjct: 88  LDV------------------------SRNDIPDIPENIKNLQALQVADFSSNPIPRLPA 123

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
                 +L    + + +L+ LP++ G L  L +L+L  N LK       QL +L  LDL 
Sbjct: 124 GFVQLRNLTVLGLNDMSLTNLPSDFGSLEALQSLELRENLLKSLPESLSQLLKLERLDLG 183

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           +N +  LP  IG++  L++L L  N L+ L   +    T A L    +RL          
Sbjct: 184 DNEIEELPAHIGQLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRL---------- 233

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
             EDL      L   + +L L    +  +P  + E  ++T L + +N +  L P +  C 
Sbjct: 234 --EDLPDEIGGLESLT-DLHLSQNVIEKLPDGLGELKKLTILKIDQNRLSTLNPNIGRCE 290

Query: 404 SLQ 406
           +LQ
Sbjct: 291 NLQ 293


>gi|383860520|ref|XP_003705737.1| PREDICTED: protein lap1-like [Megachile rotundata]
          Length = 1001

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 181/394 (45%), Gaps = 47/394 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L++ +L DVP +V+            +E   L+KL L  N I+ L   L     L VL
Sbjct: 22  LQLNHCNLYDVPPDVF-----------IYERT-LEKLYLDANRIKDLPRPLFQCHELRVL 69

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N+++ LP AI  L  L+ LD+S NSI ++PD I     L   D S N  +  P ++
Sbjct: 70  SLSDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAI 129

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
              + L +   ++  I  LP +    S +  L++  N +  L  ++ +    L  L    
Sbjct: 130 THIVGLRELYINDAYIEYLPANFGRLSALRTLELRENNMMTLPKSM-SRLVNLQRLDIGN 188

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N    +PE +G L  L  L +  N I  IP +I+    L  F    NA+  +P+E+    
Sbjct: 189 NDFTELPEVVGDLINLTELWIDGNDIRRIPVNINQLYRLNHFDCTMNAIHVIPSEVEGWR 248

Query: 254 KLGTLDLHSNQLKEYCVEACQLRLSV-LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            +  + L SN++ +     C LR  V L + +N L+ LP +IG+M++L +L++T N L  
Sbjct: 249 DISIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSSLEELIVTKNFLEY 308

Query: 313 LRSSLVNGPTPALLK----------YLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L SS+       LL+          YLR   PE             I   T LS+    L
Sbjct: 309 LPSSI------GLLRKLHCLNADNNYLRCLPPE-------------IGSCTALSL----L 345

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           SL   NL+ +P E+     +  L+L  N I+ LP
Sbjct: 346 SLRSNNLTRVPPELGHLSSLRVLNLVNNCIKFLP 379



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 125/238 (52%), Gaps = 8/238 (3%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  NN+  L + +  L  L  L++ +N  +ELP  +G+L  L  L +  N I +I
Sbjct: 158 LRTLELRENNMMTLPKSMSRLVNLQRLDIGNNDFTELPEVVGDLINLTELWIDGNDIRRI 217

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  I     L  FDC+ N +  +PS +    ++S    S+N I  LP+ L     +  L 
Sbjct: 218 PVNINQLYRLNHFDCTMNAIHVIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLK 277

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L  L N+ I   + L ELI +KN L  +P +IG L +L  L+   N +  +P  I
Sbjct: 278 VDDNQLNALPND-IGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCLNADNNYLRCLPPEI 336

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
             C +L+   + +N L+ +P ELG LS L  L+L +N     C++   L +S+L+LSN
Sbjct: 337 GSCTALSLLSLRSNNLTRVPPELGHLSSLRVLNLVNN-----CIKF--LPVSMLNLSN 387



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 155/327 (47%), Gaps = 52/327 (15%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           ++  +L+ L L+ N +  L   + +L  L  L++S N + ELP +I E   L+S+D+S N
Sbjct: 61  FQCHELRVLSLSDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVN 120

Query: 102 SIMKIPDEI-----------------------GSATALVKFDCSSNQLKELPSSLGRCLN 138
              + PD I                       G  +AL   +   N +  LP S+ R +N
Sbjct: 121 PFERFPDAITHIVGLRELYINDAYIEYLPANFGRLSALRTLELRENNMMTLPKSMSRLVN 180

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------------------- 179
           L      NN  T LPE + D   +++L ++GN +  +  N+                   
Sbjct: 181 LQRLDIGNNDFTELPEVVGDLINLTELWIDGNDIRRIPVNINQLYRLNHFDCTMNAIHVI 240

Query: 180 ---IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
              +  W  ++ +  S N +  +P+++  L  ++ L +  N++ ++P+ I    SL E  
Sbjct: 241 PSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSSLEELI 300

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYC----VEACQLRLSVLDLSNNSLSGLPP 292
           +  N L  LP+ +G L KL  L+  +N L+  C    + +C   LS+L L +N+L+ +PP
Sbjct: 301 VTKNFLEYLPSSIGLLRKLHCLNADNNYLR--CLPPEIGSCTA-LSLLSLRSNNLTRVPP 357

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           E+G +++LR L L  N ++ L  S++N
Sbjct: 358 ELGHLSSLRVLNLVNNCIKFLPVSMLN 384



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 141/324 (43%), Gaps = 40/324 (12%)

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRC-----------------------LNLSDFK 143
           PD       L K    +N++K+LP  L +C                       +NL    
Sbjct: 34  PDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVTTLPPAIASLINLEYLD 93

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
            S N I  LP+ + +C  +  +D+  N       + I     L EL  +   +  +P   
Sbjct: 94  LSKNSIKELPDSIKECKNLRSIDISVNPFERFP-DAITHIVGLRELYINDAYIEYLPANF 152

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G LS L  L+L +N ++++P S+S   +L    +GNN  + LP  +G L  L  L +  N
Sbjct: 153 GRLSALRTLELRENNMMTLPKSMSRLVNLQRLDIGNNDFTELPEVVGDLINLTELWIDGN 212

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT 322
            ++   V   QL RL+  D + N++  +P E+     +  + L+ N +  L  SL     
Sbjct: 213 DIRRIPVNINQLYRLNHFDCTMNAIHVIPSEVEGWRDISIMHLSSNEIYQLPDSLC---- 268

Query: 323 PALLKYLRSRLP-ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
                YLR+ +  + +D++ +    D+  M++      +EL +    L  +PS I    +
Sbjct: 269 -----YLRTIVTLKVDDNQLNALPNDIGQMSSL-----EELIVTKNFLEYLPSSIGLLRK 318

Query: 382 ITKLDLSRNSIQELPPELSSCASL 405
           +  L+   N ++ LPPE+ SC +L
Sbjct: 319 LHCLNADNNYLRCLPPEIGSCTAL 342



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 93/231 (40%), Gaps = 39/231 (16%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           NL +  P+       L +L L  NRI  +P  +  C  L    + +N ++ LP  +  L 
Sbjct: 28  NLYDVPPDVFIYERTLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVTTLPPAIASLI 87

Query: 254 KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEI----------------- 294
            L  LDL  N +KE    ++ C+  L  +D+S N     P  I                 
Sbjct: 88  NLEYLDLSKNSIKELPDSIKECK-NLRSIDISVNPFERFPDAITHIVGLRELYINDAYIE 146

Query: 295 ------GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
                 G+++ LR L L  N + TL  S+       L+   R  +  N+ +E      DL
Sbjct: 147 YLPANFGRLSALRTLELRENNMMTLPKSMSR-----LVNLQRLDIGNNDFTELPEVVGDL 201

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           I +         EL ++G ++  IP  I +   +   D + N+I  +P E+
Sbjct: 202 INLT--------ELWIDGNDIRRIPVNINQLYRLNHFDCTMNAIHVIPSEV 244


>gi|260788690|ref|XP_002589382.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
 gi|229274559|gb|EEN45393.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
          Length = 699

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 184/419 (43%), Gaps = 33/419 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKE---DLRNLPLL 70
           L++SN  L   P  V K       G    +  +LQKL   H N  +L E    + +LP L
Sbjct: 133 LDVSNNKLSTFPPGVEKLQKLRVLGIYDNQLTELQKLRELHINGNQLTEVPSGVCSLPNL 192

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
            VL+VS+NKLS  P  + +L  L+ L ++ N + ++P  + S   L      +N+L   P
Sbjct: 193 EVLSVSNNKLSTFPPGVEKLQKLRELHINGNQLTEVPSGVCSLPNLEVLSVYNNKLSTFP 252

Query: 131 SSLG-----RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTM 185
             +      R L++   K  NN +++ P  +    K+ +L + GN+L  +    + S   
Sbjct: 253 PGVEKLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKLRELRIYGNQLAEVPRG-VCSLPN 311

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L  L  S + L+  P  +  L +L +L ++ N++  +PS +    +L E  + NN LS  
Sbjct: 312 LEVLDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTEVPSGVCSLPNLEELSVYNNKLSTF 371

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  + KL KL  L ++ NQL E     C L  L VL + NN LS  PP + K+  LR+L 
Sbjct: 372 PPGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELY 431

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           +  N L  + S + +             LP  E    +  K              +EL +
Sbjct: 432 IYDNQLTEVPSGVCS-------------LPNLEVVYVNNNKLSTFPPGVERLQKLRELHV 478

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISGC 423
            G  L+ IP  +     +  L +S N I+ LP  +     L+  +          +SGC
Sbjct: 479 HGNQLTEIPPVVCYLTNLEVLIISDNPIRHLPDGVRRLTRLKTLY----------VSGC 527



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 182/443 (41%), Gaps = 101/443 (22%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+LSN+ L  +P EV+             +  DL+ L +++N +  + E +  L  L+ 
Sbjct: 17  TLDLSNQGLTSIPEEVF-------------DITDLEFLGVSNNRLTSIPEAIGRLQKLSR 63

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+   N L+ LP AIG L  L  L V  N +  +P  I     L       N+L E+P  
Sbjct: 64  LDAHGNMLTRLPQAIGSLQKLTHLYVYSNKLANLPPGIEKLQKLTLLSIGDNRLTEVPPG 123

Query: 133 LGRCLNLSDFKASNNCITSLP----------------EDLADCSKMSKLDVEGNKLTVLS 176
           +    NL     SNN +++ P                  L +  K+ +L + GN+LT + 
Sbjct: 124 VFLLPNLEVLDVSNNKLSTFPPGVEKLQKLRVLGIYDNQLTELQKLRELHINGNQLTEVP 183

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS----- 231
           +  + S   L  L  S N L+  P  +  L +L  L ++ N++  +P   SG CS     
Sbjct: 184 SG-VCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRELHINGNQLTEVP---SGVCSLPNLE 239

Query: 232 --------LAEFYMG------------------NNALSALPAELGKLSKLGTLDLHSNQL 265
                   L+ F  G                  NN LS  P  + KL KL  L ++ NQL
Sbjct: 240 VLSVYNNKLSTFPPGVEKLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKLRELRIYGNQL 299

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
            E     C L  L VLD+SN+ LS  PP + K+  LR+L + GN L  + S + + P   
Sbjct: 300 AEVPRGVCSLPNLEVLDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTEVPSGVCSLP--- 356

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
                                              +ELS+    LS  P  + +  ++ +
Sbjct: 357 ---------------------------------NLEELSVYNNKLSTFPPGVEKLQKLRQ 383

Query: 385 LDLSRNSIQELPPELSSCASLQV 407
           L +  N + E+PP + S  +L+V
Sbjct: 384 LYIYGNQLTEVPPGVCSLPNLEV 406



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 139/298 (46%), Gaps = 2/298 (0%)

Query: 11  SGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLL 70
           SG  +L N  +  V N     F    E  +    +D+  +   +N +      +  L  L
Sbjct: 230 SGVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKL 289

Query: 71  TVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELP 130
             L +  N+L+E+P  +  L  L+ LDVS + +   P  +     L +   + NQL E+P
Sbjct: 290 RELRIYGNQLAEVPRGVCSLPNLEVLDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTEVP 349

Query: 131 SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           S +    NL +    NN +++ P  +    K+ +L + GN+LT +    + S   L  L 
Sbjct: 350 SGVCSLPNLEELSVYNNKLSTFPPGVEKLQKLRQLYIYGNQLTEVPPG-VCSLPNLEVLS 408

Query: 191 ASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELG 250
              N L+  P  +  L +L  L ++ N++  +PS +    +L   Y+ NN LS  P  + 
Sbjct: 409 VYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEVVYVNNNKLSTFPPGVE 468

Query: 251 KLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           +L KL  L +H NQL E     C L  L VL +S+N +  LP  + ++T L+ L ++G
Sbjct: 469 RLQKLRELHVHGNQLTEIPPVVCYLTNLEVLIISDNPIRHLPDGVRRLTRLKTLYVSG 526



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 166/381 (43%), Gaps = 25/381 (6%)

Query: 43  EAVD-LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           + VD L  L L++  +  + E++ ++  L  L VS+N+L+ +P AIG L  L  LD   N
Sbjct: 10  QTVDGLLTLDLSNQGLTSIPEEVFDITDLEFLGVSNNRLTSIPEAIGRLQKLSRLDAHGN 69

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            + ++P  IGS   L      SN+L  LP  + +   L+     +N +T +P  +     
Sbjct: 70  MLTRLPQAIGSLQKLTHLYVYSNKLANLPPGIEKLQKLTLLSIGDNRLTEVPPGVFLLPN 129

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  LDV        SNN ++++    E +    +L      +  L +L  L ++ N++  
Sbjct: 130 LEVLDV--------SNNKLSTFPPGVEKLQKLRVLGIYDNQLTELQKLRELHINGNQLTE 181

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 280
           +PS +    +L    + NN LS  P  + KL KL  L ++ NQL E     C L  L VL
Sbjct: 182 VPSGVCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRELHINGNQLTEVPSGVCSLPNLEVL 241

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTG---------------NPLRTLRSSLVNGPTPAL 325
            + NN LS  PP + K+  LR+L + G                 L+ LR   + G   A 
Sbjct: 242 SVYNNKLSTFPPGVEKLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKLRELRIYGNQLAE 301

Query: 326 LKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKL 385
           +      LP  E  + S +K              ++L + G  L+ +PS +     + +L
Sbjct: 302 VPRGVCSLPNLEVLDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTEVPSGVCSLPNLEEL 361

Query: 386 DLSRNSIQELPPELSSCASLQ 406
            +  N +   PP +     L+
Sbjct: 362 SVYNNKLSTFPPGVEKLQKLR 382



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 22/307 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L++L + +N +      +  L  L  L +  N+L+E+P  +  L  L+ L V  N +  
Sbjct: 357 NLEELSVYNNKLSTFPPGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLST 416

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  +     L +     NQL E+PS +    NL     +NN +++ P  +    K+ +L
Sbjct: 417 FPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEVVYVNNNKLSTFPPGVERLQKLREL 476

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL------------- 212
            V GN+LT +   ++   T L  LI S N +  +P+ +  L+RL  L             
Sbjct: 477 HVHGNQLTEIPP-VVCYLTNLEVLIISDNPIRHLPDGVRRLTRLKTLYVSGCQFPGQVLQ 535

Query: 213 -----DLHQN--RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
                 LH    +   +P  +     L    + +N L  LP+ +  L  L  + L  N+ 
Sbjct: 536 LKTLEKLHAGGCKFDMLPDEVGNLQHLWFLSLSSNLLRTLPSTMSHLHNLREVHLDKNKF 595

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
             +    C L  +  L +SNN+++ LP  + +   L+ L ++GNPL      +    T A
Sbjct: 596 DTFPEVLCDLPAMEKLFISNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDVCEQGTAA 655

Query: 325 LLKYLRS 331
           ++ +L+ 
Sbjct: 656 IMAFLKQ 662


>gi|418701730|ref|ZP_13262652.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759294|gb|EKR25509.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 377

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 136/270 (50%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++++ LIL+   ++ L  ++  L  L  L + +N+L+ LP  I +L  L+ L +  N + 
Sbjct: 46  LEVRVLILSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+EI     L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  
Sbjct: 106 TLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKS 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+LT L N  I     L  L  S+N     P+ IG L  L  L L+ N+I  +P+
Sbjct: 166 LNLSNNQLTTLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I+    L   Y+ +N L  LP E+ +L  L +LDL  NQL     E  QL  L  LDL 
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           NN L  LP EI ++  L+ L L+ N L  L
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTIL 314



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 157/364 (43%), Gaps = 45/364 (12%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL +S  +L  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP+
Sbjct: 50  VLILSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPN 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 110 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD-IEQLQNLKSLNL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN ++ LP E+ K
Sbjct: 169 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 229 LKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
           +TL   +                            E L  + T        L L    L+
Sbjct: 289 KTLPKEI----------------------------EQLKNLQT--------LFLSNNQLT 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV------KFSDLVTNK-ESCISGC 423
            +P EI +   +  L L  N +  LP E+    +LQ       +FS     K    +  C
Sbjct: 313 ILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLNLWNNQFSSQEKEKIRKLLPKC 372

Query: 424 YLYW 427
            +Y+
Sbjct: 373 QIYF 376



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 137/299 (45%), Gaps = 41/299 (13%)

Query: 17  SNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKEDLRN 66
           SNR L  +PNE+   KN      G      +        +LQ L L  N +  L +D+  
Sbjct: 101 SNR-LTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQ 159

Query: 67  LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
           L  L  LN+S+N+L+ LP  I +L  LKSL +S N     P EIG    L     ++NQ+
Sbjct: 160 LQNLKSLNLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQI 219

Query: 127 KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
             LP+ + +   L     S+N + +LP+++     +  LD+  N+LT+L           
Sbjct: 220 TILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTIL----------- 268

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
                        P+ +G L  L  LDL  N++ ++P  I    +L   ++ NN L+ LP
Sbjct: 269 -------------PKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 315

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
            E+GKL  L  L L  NQL     E  QL+ L  L+L NN  S    E      +RKLL
Sbjct: 316 QEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLNLWNNQFSSQEKE-----KIRKLL 369



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 87/175 (49%), Gaps = 10/175 (5%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKE 62
           SLNLSN  L  +PNE+   KN       +  +           +L+ L L +N I  L  
Sbjct: 165 SLNLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPN 224

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  LKSLD+S+N +  +P E+G    L   D  
Sbjct: 225 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLR 284

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSN 177
           +NQLK LP  + +  NL     SNN +T LP+++     +  L +  N+LT L N
Sbjct: 285 NNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPN 339


>gi|426256334|ref|XP_004021795.1| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1 [Ovis aries]
          Length = 1029

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 148/295 (50%), Gaps = 28/295 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSI 103
           D++ L L +N +E++ + L + L  L VL +  N+ ++LP A+ EL H L  LDVS N +
Sbjct: 62  DIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPPAVAELGHHLTELDVSHNRL 121

Query: 104 MKI-PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
             + P+ +G+   L K + S NQL  LP+ LG  ++L +   S N +  LP+ LA  S++
Sbjct: 122 SVLGPEAVGALRELRKLNLSHNQLPTLPAQLGALVHLEELDVSFNRLAHLPDSLAGLSRL 181

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LDV+ N+LT     L+    +    ++S N L G+PE I +L  L  L L    + ++
Sbjct: 182 RTLDVDHNQLTAFPRQLLQLAALEELDVSS-NRLRGLPEDISALRALKILWLSGAELGTL 240

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------- 275
           PS      SL    + NN L ALPA+  +L +L  L+L SN L+E+      L       
Sbjct: 241 PSGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELY 300

Query: 276 -----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                            RL  L L NN +  LP  I ++T L +L+L GN +  L
Sbjct: 301 LSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVL 355



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 134/276 (48%), Gaps = 28/276 (10%)

Query: 70  LTVLNVSH------------------------NKLSELPAAIGEL-HMLKSLDVSFNSIM 104
           + VLN+ +                        N+ ++LP A+ EL H L  LDVS N + 
Sbjct: 63  IEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPPAVAELGHHLTELDVSHNRLS 122

Query: 105 KI-PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
            + P+ +G+   L K + S NQL  LP+ LG  ++L +   S N +  LP+ LA  S++ 
Sbjct: 123 VLGPEAVGALRELRKLNLSHNQLPTLPAQLGALVHLEELDVSFNRLAHLPDSLAGLSRLR 182

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            LDV+ N+LT     L+    +    ++S N L G+PE I +L  L  L L    + ++P
Sbjct: 183 TLDVDHNQLTAFPRQLLQLAALEELDVSS-NRLRGLPEDISALRALKILWLSGAELGTLP 241

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
           S      SL    + NN L ALPA+  +L +L  L+L SN L+E+      L  L  L L
Sbjct: 242 SGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYL 301

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           S N L+ +P  I  +  L  L L  N +R L  S+V
Sbjct: 302 SRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIV 337



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 133/268 (49%), Gaps = 7/268 (2%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L +L ++HN +  L  E +  L  L  LN+SHN+L  LPA +G L  L+ LDVSFN +  
Sbjct: 111 LTELDVSHNRLSVLGPEAVGALRELRKLNLSHNQLPTLPAQLGALVHLEELDVSFNRLAH 170

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PD +   + L   D   NQL   P  L +   L +   S+N +  LPED++    +  L
Sbjct: 171 LPDSLAGLSRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKIL 230

Query: 166 DVEGNKLTVLSNNL--IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            + G +L  L +    +AS   L  L+   N L  +P     L RL  L+L  N +   P
Sbjct: 231 WLSGAELGTLPSGFCELAS---LESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFP 287

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
           +++     L E Y+  N L+++P+ +  L +L TL L +N+++       +L  L  L L
Sbjct: 288 AALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVL 347

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             N ++ LP   G+++ +    +  NPL
Sbjct: 348 QGNQIAVLPDNFGQLSRVGLWKIKDNPL 375



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 4/264 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L ++ N +  L + L  L  L  L+V HN+L+  P  + +L  L+ LDVS N + 
Sbjct: 156 VHLEELDVSFNRLAHLPDSLAGLSRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLR 215

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P++I +  AL     S  +L  LPS      +L      NN + +LP   +   ++  
Sbjct: 216 GLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKM 275

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N L      L+     L EL  S+N L  +P  I  L RL+ L L  NRI  +P 
Sbjct: 276 LNLSSNLLEEFPAALL-PLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPD 334

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
           SI     L E  +  N ++ LP   G+LS++G   +  N L +   E C   +  +    
Sbjct: 335 SIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEVCMKGIPYIAAYQ 394

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGN 308
             L+   P +       KLLL G 
Sbjct: 395 KELAHSQPAVQPRL---KLLLMGQ 415



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 134/310 (43%), Gaps = 51/310 (16%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPEDLADCSK-MS 163
           +P  IG    L   +  +N L+E+P  LG  L +L       N    LP  +A+    ++
Sbjct: 56  LPANIGDIEVL---NLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPPAVAELGHHLT 112

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +LDV  N+L+VL                        PE +G+L  L +L+L  N++ ++P
Sbjct: 113 ELDVSHNRLSVLG-----------------------PEAVGALRELRKLNLSHNQLPTLP 149

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC-VEACQLRLSVLDL 282
           + +     L E  +  N L+ LP  L  LS+L TLD+  NQL  +         L  LD+
Sbjct: 150 AQLGALVHLEELDVSFNRLAHLPDSLAGLSRLRTLDVDHNQLTAFPRQLLQLAALEELDV 209

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           S+N L GLP +I  +  L+ L L+G  L TL S          L  L S + +N    A 
Sbjct: 210 SSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCE------LASLESLMLDNNGLRAL 263

Query: 343 TTKEDLITMATRLSVTS----------------KELSLEGMNLSAIPSEIWEAGEITKLD 386
             +   +     L+++S                +EL L    L+++PS I   G +  L 
Sbjct: 264 PAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLW 323

Query: 387 LSRNSIQELP 396
           L  N I+ LP
Sbjct: 324 LDNNRIRYLP 333



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 17/175 (9%)

Query: 237 MGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 293
           +GNN L  +P  LG  L  L  L L  N+  +      +L   L+ LD+S+N LS L PE
Sbjct: 68  LGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPPAVAELGHHLTELDVSHNRLSVLGPE 127

Query: 294 -IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
            +G +  LRKL L+ N L TL + L        L    +RL    DS A  ++       
Sbjct: 128 AVGALRELRKLNLSHNQLPTLPAQLGALVHLEELDVSFNRLAHLPDSLAGLSR------- 180

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
                  + L ++   L+A P ++ +   + +LD+S N ++ LP ++S+  +L++
Sbjct: 181 ------LRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKI 229


>gi|225438416|ref|XP_002276062.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Vitis vinifera]
 gi|296082577|emb|CBI21582.3| unnamed protein product [Vitis vinifera]
          Length = 557

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 141/279 (50%), Gaps = 6/279 (2%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           + IE L + +  L  L  L++S N++  LPA IG L  L  LD+  N I ++PD IG+  
Sbjct: 239 DQIEWLPDSIGKLSSLMTLDLSENRIVALPATIGGLSSLTKLDLHSNRIAELPDCIGNLL 298

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           ++V  D   NQL  LP++  R + L +   S+N ++SLPE +    K+ KL VE N +  
Sbjct: 299 SVVVLDLRGNQLTSLPATFCRLVRLEELDLSSNRLSSLPESIGSLVKLKKLSVETNDIEE 358

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           + +  I   + L EL A  N L  +PE +G +  L  L +  N I  +P+++S   +L E
Sbjct: 359 IPHT-IGQCSSLKELRADYNRLKALPEAVGRIQSLEILSVRYNNIKQLPTTMSSLSNLRE 417

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSN----QLKEYCVEACQLRLSVLDLSNNSLSGL 290
             +  N L ++P  L   + L  +++ SN    Q     +   ++ L  LD+SNN +  L
Sbjct: 418 LDVSFNELESIPESLCFATTLVKMNIGSNFADLQYLPRSIGNLEM-LEELDISNNQIRVL 476

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           P     +T LR L L  NPL      +      A+++Y+
Sbjct: 477 PDSFKMLTRLRVLRLDQNPLEVPPRHVAEMGAQAVVQYM 515



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 128/254 (50%), Gaps = 27/254 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L KL L  N I +L + + NL  + VL++  N+L+ LPA    L  L+ LD+S N +  +
Sbjct: 277 LTKLDLHSNRIAELPDCIGNLLSVVVLDLRGNQLTSLPATFCRLVRLEELDLSSNRLSSL 336

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ IGS   L K    +N ++E+P ++G+C +L + +A  N + +LPE +    ++  L+
Sbjct: 337 PESIGSLVKLKKLSVETNDIEEIPHTIGQCSSLKELRADYNRLKALPEAVG---RIQSLE 393

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +    L+V  NN                 +  +P T+ SLS L  LD+  N + SIP S+
Sbjct: 394 I----LSVRYNN-----------------IKQLPTTMSSLSNLRELDVSFNELESIPESL 432

Query: 227 SGCCSLAEFYMGNNA--LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
               +L +  +G+N   L  LP  +G L  L  LD+ +NQ++        L RL VL L 
Sbjct: 433 CFATTLVKMNIGSNFADLQYLPRSIGNLEMLEELDISNNQIRVLPDSFKMLTRLRVLRLD 492

Query: 284 NNSLSGLPPEIGKM 297
            N L   P  + +M
Sbjct: 493 QNPLEVPPRHVAEM 506



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 115/236 (48%), Gaps = 41/236 (17%)

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P++IG LS L+ LDL +NRI+++P++I G  SL +  + +N ++ LP  +G L  +  L
Sbjct: 244 LPDSIGKLSSLMTLDLSENRIVALPATIGGLSSLTKLDLHSNRIAELPDCIGNLLSVVVL 303

Query: 259 DLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           DL  NQL       C+L RL  LDLS+N LS LP  IG +  L+KL +  N +  +  ++
Sbjct: 304 DLRGNQLTSLPATFCRLVRLEELDLSSNRLSSLPESIGSLVKLKKLSVETNDIEEIPHTI 363

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
             G   +L                                  KEL  +   L A+P  + 
Sbjct: 364 --GQCSSL----------------------------------KELRADYNRLKALPEAVG 387

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQ---VKFSDLVTNKES-CISGCYLYWNL 429
               +  L +  N+I++LP  +SS ++L+   V F++L +  ES C +   +  N+
Sbjct: 388 RIQSLEILSVRYNNIKQLPTTMSSLSNLRELDVSFNELESIPESLCFATTLVKMNI 443



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 11/207 (5%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L+ N +  L E + +L  L  L+V  N + E+P  IG+   LK L   +N + 
Sbjct: 321 VRLEELDLSSNRLSSLPESIGSLVKLKKLSVETNDIEEIPHTIGQCSSLKELRADYNRLK 380

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P+ +G   +L       N +K+LP+++    NL +   S N + S+PE L   + + K
Sbjct: 381 ALPEAVGRIQSLEILSVRYNNIKQLPTTMSSLSNLRELDVSFNELESIPESLCFATTLVK 440

Query: 165 LDVEGN--KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           +++  N   L  L  + I +  ML EL  S N +  +P++   L+RL  L L QN +   
Sbjct: 441 MNIGSNFADLQYLPRS-IGNLEMLEELDISNNQIRVLPDSFKMLTRLRVLRLDQNPLEVP 499

Query: 223 PSSISGCCSLAEFYMGNNALSALPAEL 249
           P  ++         MG  A+    AEL
Sbjct: 500 PRHVA--------EMGAQAVVQYMAEL 518


>gi|417406607|gb|JAA49953.1| Putative protein scribble [Desmodus rotundus]
          Length = 1575

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 199/431 (46%), Gaps = 69/431 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++P+      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L  +   L E
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTL-GALPNLRE 201

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS------------------------ 224
           L   +N L+ +P  +G+L RL+ LD+ +NR+ ++P+                        
Sbjct: 202 LWLDRNQLSALPPELGNLRRLVCLDVSENRLEALPAELGGLALLTDLLLSQNLLQRLPDG 261

Query: 225 ----------------------SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
                                 +I  C +L+E  +  N L+ALP  LGKL+KL  L++  
Sbjct: 262 IGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDR 321

Query: 263 NQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
           N+L+    E   C + LSVL L +N L+ LPPE+   T L  L + GN L++L  +L + 
Sbjct: 322 NRLEVLPPEIGGC-VALSVLSLRDNRLAILPPELAHTTELHVLDVAGNRLQSLPFALTHL 380

Query: 321 PTPALLKYLRSRLP----ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
              AL        P    + ED   + T E ++T    L       SLEG    + PSE 
Sbjct: 381 NLKALWLAENQAQPMLRFQTEDD--TQTGEKVLTCY--LLPQQPPPSLEGPGQRSSPSES 436

Query: 377 WEAGEITKLDL 387
           W    ++++ +
Sbjct: 437 WSDAPLSRVSV 447



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LPE       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPEGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+    E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEALPAELGGLALLTDLLLSQNLLQRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPH 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNRLEVLPPEIGGCVALSV 339


>gi|397493669|ref|XP_003817723.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Pan paniscus]
          Length = 573

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 182/396 (45%), Gaps = 36/396 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L    L+++P  V KN               L+ L L  N+++ L +++ N   L  +
Sbjct: 136 LRLYQTDLKEIPVVVCKNLHH------------LELLGLTGNHLKCLPKEIVNQTKLREI 183

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+    P  +  L+ L+ +D+  N I  IP+EIG  T L KF  +SN L  LP+SL
Sbjct: 184 YLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASL 243

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +C  LS    S+N + S+P+ LA+  KM+++ + GN+L  +   LI  WT L  L    
Sbjct: 244 CQCSQLSVLDLSHNLLHSIPKSLAELRKMTEIGLSGNRLEKVP-RLICRWTSLHLLYLGN 302

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
             L+ +  +   L  L  LDL QN +   P  I    +L    + +N +  LP+ELG LS
Sbjct: 303 TGLHRLRGSFRCLVNLRFLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLS 362

Query: 254 KLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           KL  L L  N+   +  E   L    +L +       L+ +P  I K+ +L++L +  N 
Sbjct: 363 KLKILGLTGNEFLSFPEEVLSLASLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNH 422

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE--DLITMATRLSVTSKELSLEGM 367
           L  L  SL + P   +L           D   +  K+  D I  A  L    KEL LE  
Sbjct: 423 LEYLPVSLGSMPNLEVL-----------DCRHNLLKQLPDAICQAQAL----KELRLEDN 467

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            L+ +P  +     +  L L  N ++E P E+  CA
Sbjct: 468 LLTHLPENLDSLVNLKVLTLMDNPMEEPPKEV--CA 501



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 150/336 (44%), Gaps = 13/336 (3%)

Query: 73  LNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           L +    L E+P  + + LH L+ L ++ N +  +P EI + T L +     NQ +  P 
Sbjct: 136 LRLYQTDLKEIPVVVCKNLHHLELLGLTGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQ 195

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            L     L       N I ++PE++   + + K  +  N L VL  +L    + L+ L  
Sbjct: 196 ELCVLYTLEIIDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASL-CQCSQLSVLDL 254

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S NLL+ +P+++  L ++  + L  NR+  +P  I    SL   Y+GN  L  L      
Sbjct: 255 SHNLLHSIPKSLAELRKMTEIGLSGNRLEKVPRLICRWTSLHLLYLGNTGLHRLRGSFRC 314

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDL  N L    ++ C L+ L VL L +N +  LP E+G ++ L+ L LTGN  
Sbjct: 315 LVNLRFLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTGN-- 372

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
                  ++ P   L      +L   +D     T    +    R   + KEL +E  +L 
Sbjct: 373 -----EFLSFPEEVLSLASLEKLYIGQDQGFKLT---YVPEHIRKLQSLKELYIENNHLE 424

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P  +     +  LD   N +++LP  +    +L+
Sbjct: 425 YLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQALK 460



 Score = 42.7 bits (99), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 87/226 (38%), Gaps = 39/226 (17%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           R   +D     + +IP  I     L E ++ NN +  +P E+ +L  +  L L  N L+ 
Sbjct: 39  RTFFIDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRS 98

Query: 268 YC-------------------------VEACQLRLSVLDLSNNSLSGLPPEIGK-MTTLR 301
            C                         V +    L  L L    L  +P  + K +  L 
Sbjct: 99  LCPALGLLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVVCKNLHHLE 158

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L LTGN L+ L   +VN  T     YL+        ++     ++L  + T L +    
Sbjct: 159 LLGLTGNHLKCLPKEIVNQ-TKLREIYLKR-------NQFEVFPQELCVLYT-LEI---- 205

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           + L+   + AIP EI     + K  ++ N++  LP  L  C+ L V
Sbjct: 206 IDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASLCQCSQLSV 251


>gi|410042294|ref|XP_003951407.1| PREDICTED: protein scribble homolog isoform 1 [Pan troglodytes]
 gi|410257936|gb|JAA16935.1| scribbled homolog [Pan troglodytes]
          Length = 1637

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 167/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTH 379



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|271962539|ref|YP_003336735.1| hypothetical protein [Streptosporangium roseum DSM 43021]
 gi|270505714|gb|ACZ83992.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 354

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 131/251 (52%), Gaps = 3/251 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L  N I +L E +  L  L  L V  N L+ +PA +  L  L SL+++ NSI +
Sbjct: 92  ELRTLFLYGNAIGELPEGIGLLRGLRHLAVGGNALTSVPAGLWRLTGLASLNLAENSITE 151

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF-KASNNCITSLPEDLADCSKMSK 164
           +P+ IG  T L   D   N L  +P ++G   NL+D+   S+N  TS+P  L   ++++ 
Sbjct: 152 VPETIGRLTELRMLDLGHNALTRIPEAIGDLSNLTDYLYLSDNRFTSVPASLGGLTRLTY 211

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+LT L    I   T L EL    N L  +PETIG L  L  L L  N +  +P+
Sbjct: 212 LNLTDNRLTDLPAA-IGGLTALRELRLYGNRLREIPETIGRLRELRELHLMNNALTCLPA 270

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
           S+     L    + NNA+++LP  L  LS+L  LDL +N+L+E       L  L  LDL 
Sbjct: 271 SVGDLSGLRLLDLRNNAITSLPGSLTGLSRLTHLDLRNNRLREIPGGLADLPALEKLDLR 330

Query: 284 NNSLSGLPPEI 294
            N L    PE+
Sbjct: 331 WNKLDDGDPEV 341



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 137/275 (49%), Gaps = 4/275 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+++ LA N + +L E +  LP L  L +  N+L +LP   G L  L++L +  N++ + 
Sbjct: 25  LRRIDLAWNALTELPEWVGRLPRLEDLRLDGNRLRDLPDLHG-LTALRALHLDGNALTRF 83

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ +     L       N + ELP  +G    L       N +TS+P  L   + ++ L+
Sbjct: 84  PESVLRLPELRTLFLYGNAIGELPEGIGLLRGLRHLAVGGNALTSVPAGLWRLTGLASLN 143

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI-RLDLHQNRILSIPSS 225
           +  N +T +    I   T L  L    N L  +PE IG LS L   L L  NR  S+P+S
Sbjct: 144 LAENSITEVPET-IGRLTELRMLDLGHNALTRIPEAIGDLSNLTDYLYLSDNRFTSVPAS 202

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSN 284
           + G   L    + +N L+ LPA +G L+ L  L L+ N+L+E      +LR L  L L N
Sbjct: 203 LGGLTRLTYLNLTDNRLTDLPAAIGGLTALRELRLYGNRLREIPETIGRLRELRELHLMN 262

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           N+L+ LP  +G ++ LR L L  N + +L  SL  
Sbjct: 263 NALTCLPASVGDLSGLRLLDLRNNAITSLPGSLTG 297



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 140/279 (50%), Gaps = 8/279 (2%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N +  L  DL  L  L  L++  N L+  P ++  L  L++L +  N+I ++
Sbjct: 48  LEDLRLDGNRLRDLP-DLHGLTALRALHLDGNALTRFPESVLRLPELRTLFLYGNAIGEL 106

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ IG    L       N L  +P+ L R   L+    + N IT +PE +   +++  LD
Sbjct: 107 PEGIGLLRGLRHLAVGGNALTSVPAGLWRLTGLASLNLAENSITEVPETIGRLTELRMLD 166

Query: 167 VEGNKLTVLSNNLIASWTMLTE-LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           +  N LT +    I   + LT+ L  S N    +P ++G L+RL  L+L  NR+  +P++
Sbjct: 167 LGHNALTRIPEA-IGDLSNLTDYLYLSDNRFTSVPASLGGLTRLTYLNLTDNRLTDLPAA 225

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS---VLDL 282
           I G  +L E  +  N L  +P  +G+L +L  L L +N L   C+ A    LS   +LDL
Sbjct: 226 IGGLTALRELRLYGNRLREIPETIGRLRELRELHLMNNALT--CLPASVGDLSGLRLLDL 283

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
            NN+++ LP  +  ++ L  L L  N LR +   L + P
Sbjct: 284 RNNAITSLPGSLTGLSRLTHLDLRNNRLREIPGGLADLP 322



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 158/342 (46%), Gaps = 44/342 (12%)

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           LL  ++++ N L+ELP  +G L  L+ L +  N +  +PD  G  TAL       N L  
Sbjct: 24  LLRRIDLAWNALTELPEWVGRLPRLEDLRLDGNRLRDLPDLHG-LTALRALHLDGNALTR 82

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW--TML 186
            P S+ R   L       N I  LPE +     +  L V GN LT +   L   W  T L
Sbjct: 83  FPESVLRLPELRTLFLYGNAIGELPEGIGLLRGLRHLAVGGNALTSVPAGL---WRLTGL 139

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF-YMGNNALSAL 245
             L  ++N +  +PETIG L+ L  LDL  N +  IP +I    +L ++ Y+ +N  +++
Sbjct: 140 ASLNLAENSITEVPETIGRLTELRMLDLGHNALTRIPEAIGDLSNLTDYLYLSDNRFTSV 199

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLL 305
           PA LG L+                      RL+ L+L++N L+ LP  IG +T LR+L L
Sbjct: 200 PASLGGLT----------------------RLTYLNLTDNRLTDLPAAIGGLTALRELRL 237

Query: 306 TGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
            GN LR +  ++        L+ LR   L  N  +    +  DL  +        + L L
Sbjct: 238 YGNRLREIPETI------GRLRELRELHLMNNALTCLPASVGDLSGL--------RLLDL 283

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
               ++++P  +     +T LDL  N ++E+P  L+   +L+
Sbjct: 284 RNNAITSLPGSLTGLSRLTHLDLRNNRLREIPGGLADLPALE 325



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 111/238 (46%), Gaps = 26/238 (10%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSF 100
           W    L  L LA N+I ++ E +  L  L +L++ HN L+ +P AIG+L ++   L +S 
Sbjct: 134 WRLTGLASLNLAENSITEVPETIGRLTELRMLDLGHNALTRIPEAIGDLSNLTDYLYLSD 193

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N    +P  +G  T L   + + N+L +LP+++G    L + +   N +  +PE +    
Sbjct: 194 NRFTSVPASLGGLTRLTYLNLTDNRLTDLPAAIGGLTALRELRLYGNRLREIPETIGRLR 253

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
           ++ +L +  N LT L                        P ++G LS L  LDL  N I 
Sbjct: 254 ELRELHLMNNALTCL------------------------PASVGDLSGLRLLDLRNNAIT 289

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 278
           S+P S++G   L    + NN L  +P  L  L  L  LDL  N+L +   E    RLS
Sbjct: 290 SLPGSLTGLSRLTHLDLRNNRLREIPGGLADLPALEKLDLRWNKLDDGDPEVLH-RLS 346



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 140/323 (43%), Gaps = 42/323 (13%)

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            +  +P   G    L + D + N L ELP  +GR   L D +   N +  LP DL   + 
Sbjct: 11  GLTALPAPAGDPALLRRIDLAWNALTELPEWVGRLPRLEDLRLDGNRLRDLP-DLHGLTA 69

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L ++GN LT                          PE++  L  L  L L+ N I  
Sbjct: 70  LRALHLDGNALTR------------------------FPESVLRLPELRTLFLYGNAIGE 105

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 280
           +P  I     L    +G NAL+++PA L +L+ L +L+L  N + E      +L  L +L
Sbjct: 106 LPEGIGLLRGLRHLAVGGNALTSVPAGLWRLTGLASLNLAENSITEVPETIGRLTELRML 165

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLL-LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           DL +N+L+ +P  IG ++ L   L L+ N   ++ +SL  G T   L YL   L +N  +
Sbjct: 166 DLGHNALTRIPEAIGDLSNLTDYLYLSDNRFTSVPASL-GGLT--RLTYLN--LTDNRLT 220

Query: 340 EASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           +       L  +        +EL L G  L  IP  I    E+ +L L  N++  LP  +
Sbjct: 221 DLPAAIGGLTAL--------RELRLYGNRLREIPETIGRLRELRELHLMNNALTCLPASV 272

Query: 400 SSCASLQVKFSDLVTNKESCISG 422
              + L  +  DL  N  + + G
Sbjct: 273 GDLSGL--RLLDLRNNAITSLPG 293


>gi|24216021|ref|NP_713502.1| hypothetical protein LA_3322 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075102|ref|YP_005989421.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|24197249|gb|AAN50520.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458893|gb|AER03438.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
          Length = 284

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 117/238 (49%), Gaps = 25/238 (10%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +LN+S  KL   P  IG+L  L+ L +S N    +P EI     L   D   NQLK LP 
Sbjct: 52  ILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLQNLKSLDLWDNQLKTLPK 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G+  NL      +N +T LP+++     + KL++  N+L  L                
Sbjct: 112 EIGKLQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQLKTL---------------- 155

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
                   P+ IG L  L +++L +NR+ ++P+ I    +L   Y+  N L+ LP E+G+
Sbjct: 156 --------PKEIGQLQNLQKMNLDKNRLNTLPNEIGQLQNLESLYLNYNQLTILPKEIGQ 207

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           L  L +L L+ NQL     E  QL+ L  L L  N L+ LP EIG++  L++L L  N
Sbjct: 208 LQNLESLYLNYNQLTMLPQEIGQLQNLEGLYLKYNQLTTLPKEIGRLQNLKRLYLKYN 265



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 117/261 (44%), Gaps = 37/261 (14%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS + L+  P E+              +  +LQ+L L+ N    L +++  L  L  L
Sbjct: 53  LNLSRQKLKTFPKEI-------------GQLKNLQELHLSSNQFTTLPKEIEQLQNLKSL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+L  LP  IG+L  LKSLD+  N +  +P EIG    L K +  +NQLK LP  +
Sbjct: 100 DLWDNQLKTLPKEIGKLQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQLKTLPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL       N + +LP ++     +  L +  N+LT+L                  
Sbjct: 160 GQLQNLQKMNLDKNRLNTLPNEIGQLQNLESLYLNYNQLTIL------------------ 201

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
                 P+ IG L  L  L L+ N++  +P  I    +L   Y+  N L+ LP E+G+L 
Sbjct: 202 ------PKEIGQLQNLESLYLNYNQLTMLPQEIGQLQNLEGLYLKYNQLTTLPKEIGRLQ 255

Query: 254 KLGTLDLHSNQLKEYCVEACQ 274
            L  L L  NQ      E  Q
Sbjct: 256 NLKRLYLKYNQFSSKEKEKIQ 276



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 108/243 (44%), Gaps = 35/243 (14%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S+  L   P+ IG L  L  L L  N+  ++P  I    +L    + +N L  LP E+GK
Sbjct: 56  SRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLQNLKSLDLWDNQLKTLPKEIGK 115

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L +LDL SNQL     E  QL+ L  L+L NN L  LP EIG++  L+K+ L  N L
Sbjct: 116 LQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQLKTLPKEIGQLQNLQKMNLDKNRL 175

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL----SLEG 366
            TL                      NE  +     E L     +L++  KE+    +LE 
Sbjct: 176 NTL---------------------PNEIGQLQNL-ESLYLNYNQLTILPKEIGQLQNLES 213

Query: 367 M-----NLSAIPSEIWEAGEITKLDLSRNSIQELPPE---LSSCASLQVKFSDLVTNKES 418
           +      L+ +P EI +   +  L L  N +  LP E   L +   L +K++   + ++ 
Sbjct: 214 LYLNYNQLTMLPQEIGQLQNLEGLYLKYNQLTTLPKEIGRLQNLKRLYLKYNQFSSKEKE 273

Query: 419 CIS 421
            I 
Sbjct: 274 KIQ 276



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 17/207 (8%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           L+L + ++ + P  I    +L E ++ +N  + LP E+ +L  L +LDL  NQLK    E
Sbjct: 53  LNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLQNLKSLDLWDNQLKTLPKE 112

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L+ L  LDL +N L+ LP EIG++  L+KL L  N L+TL         P  +  L+
Sbjct: 113 IGKLQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQLKTL---------PKEIGQLQ 163

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
           +    N D     T  + I     L      L L    L+ +P EI +   +  L L+ N
Sbjct: 164 NLQKMNLDKNRLNTLPNEIGQLQNLE----SLYLNYNQLTILPKEIGQLQNLESLYLNYN 219

Query: 391 SIQELPPELSSCASLQ---VKFSDLVT 414
            +  LP E+    +L+   +K++ L T
Sbjct: 220 QLTMLPQEIGQLQNLEGLYLKYNQLTT 246



 Score = 38.5 bits (88), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L + +L+LS   L   P EIG++  L++L L+ N   TL   +        L+ L+S   
Sbjct: 48  LGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQ------LQNLKSL-- 99

Query: 335 ENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
           +  D++  T  +++  +        K L L    L+ +P EI +   + KL+L  N ++ 
Sbjct: 100 DLWDNQLKTLPKEIGKLQ-----NLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQLKT 154

Query: 395 LPPELSSCASLQ 406
           LP E+    +LQ
Sbjct: 155 LPKEIGQLQNLQ 166


>gi|169828175|ref|YP_001698333.1| protein lap4 [Lysinibacillus sphaericus C3-41]
 gi|168992663|gb|ACA40203.1| Protein lap4 (Protein scribble) (Protein smell-impaired)
           [Lysinibacillus sphaericus C3-41]
          Length = 289

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 126/223 (56%), Gaps = 2/223 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           ++++L L  N++ K+  ++ ++  + +LN+S NK+++LPA I  L  L+ LD   N I  
Sbjct: 28  EIKELNLFDNDLRKIPTEIFDMTSMEILNISVNKINKLPAEITNLKNLRMLDAGHNHIDL 87

Query: 106 IPDEIGSATALVKF-DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           IP EIG    +  +    +NQL+ +P  +G+   +     S+N ++ LPE++ + +K+ +
Sbjct: 88  IPPEIGHLVNMEDYLYFHNNQLQSIPPEIGQLTKVRYLNVSDNLLSELPEEIGNLNKLVE 147

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+LT L   L +  T L EL   KN +  +PE IG L+ L  LDL  N++  +P 
Sbjct: 148 LRIMNNRLTELPEGL-SRLTNLRELHLKKNKITILPEKIGELALLRVLDLEDNQLQKMPD 206

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           S+  C +L    + +N LS LP  +G L  L  LD+ SN LKE
Sbjct: 207 SLHKCLTLRRLNVRHNKLSTLPESIGHLKNLLELDVRSNDLKE 249



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 129/249 (51%), Gaps = 28/249 (11%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           LN+  N L ++P  I ++  ++ L++S N I K+P EI +   L   D   N +  +P  
Sbjct: 32  LNLFDNDLRKIPTEIFDMTSMEILNISVNKINKLPAEITNLKNLRMLDAGHNHIDLIPPE 91

Query: 133 LGRCLNLSDF-KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           +G  +N+ D+    NN + S+P ++   +K+  L+V                        
Sbjct: 92  IGHLVNMEDYLYFHNNQLQSIPPEIGQLTKVRYLNV------------------------ 127

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S NLL+ +PE IG+L++L+ L +  NR+  +P  +S   +L E ++  N ++ LP ++G+
Sbjct: 128 SDNLLSELPEEIGNLNKLVELRIMNNRLTELPEGLSRLTNLRELHLKKNKITILPEKIGE 187

Query: 252 LSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           L+ L  LDL  NQL++    +  C L L  L++ +N LS LP  IG +  L +L +  N 
Sbjct: 188 LALLRVLDLEDNQLQKMPDSLHKC-LTLRRLNVRHNKLSTLPESIGHLKNLLELDVRSND 246

Query: 310 LRTLRSSLV 318
           L+ L  SL+
Sbjct: 247 LKELPESLL 255



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 122/253 (48%), Gaps = 15/253 (5%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
            LNL +  LR +P E++             +   ++ L ++ N I KL  ++ NL  L +
Sbjct: 31  ELNLFDNDLRKIPTEIF-------------DMTSMEILNISVNKINKLPAEITNLKNLRM 77

Query: 73  LNVSHNKLSELPAAIGEL-HMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           L+  HN +  +P  IG L +M   L    N +  IP EIG  T +   + S N L ELP 
Sbjct: 78  LDAGHNHIDLIPPEIGHLVNMEDYLYFHNNQLQSIPPEIGQLTKVRYLNVSDNLLSELPE 137

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +G    L + +  NN +T LPE L+  + + +L ++ NK+T+L    I    +L  L  
Sbjct: 138 EIGNLNKLVELRIMNNRLTELPEGLSRLTNLRELHLKKNKITILPEK-IGELALLRVLDL 196

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  MP+++     L RL++  N++ ++P SI    +L E  + +N L  LP  L  
Sbjct: 197 EDNQLQKMPDSLHKCLTLRRLNVRHNKLSTLPESIGHLKNLLELDVRSNDLKELPESLLA 256

Query: 252 LSKLGTLDLHSNQ 264
           +  L  LDL  N 
Sbjct: 257 MESLERLDLRWNH 269



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 141/322 (43%), Gaps = 51/322 (15%)

Query: 117 VKFDCSSNQLKELPS-SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           +K + +   LK+LP     +   + +    +N +  +P ++ D + M  L++  NK+   
Sbjct: 6   MKINLAQMNLKKLPVVEESQIKEIKELNLFDNDLRKIPTEIFDMTSMEILNISVNKI--- 62

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
                                N +P  I +L  L  LD   N I  IP  I    ++ ++
Sbjct: 63  ---------------------NKLPAEITNLKNLRMLDAGHNHIDLIPPEIGHLVNMEDY 101

Query: 236 -YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPE 293
            Y  NN L ++P E+G+L+K+  L++  N L E   E   L +L  L + NN L+ LP  
Sbjct: 102 LYFHNNQLQSIPPEIGQLTKVRYLNVSDNLLSELPEEIGNLNKLVELRIMNNRLTELPEG 161

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMAT 353
           + ++T LR+L L  N +  L   +  G   ALL+ L     + ED++     + L     
Sbjct: 162 LSRLTNLRELHLKKNKITILPEKI--GEL-ALLRVL-----DLEDNQLQKMPDSL----- 208

Query: 354 RLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLV 413
              +T + L++    LS +P  I     + +LD+  N ++ELP  L +  SL+    DL 
Sbjct: 209 HKCLTLRRLNVRHNKLSTLPESIGHLKNLLELDVRSNDLKELPESLLAMESLE--RLDLR 266

Query: 414 TNKESCI---------SGCYLY 426
            N E  I          GC +Y
Sbjct: 267 WNHELKIPIWLDELEARGCIVY 288



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 24/169 (14%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N + +L E++ NL  L  L + +N+L+ELP  +  L  L+ L +  N I  +P++IG   
Sbjct: 130 NLLSELPEEIGNLNKLVELRIMNNRLTELPEGLSRLTNLRELHLKKNKITILPEKIGELA 189

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L   D   NQL+++P SL +CL L      +N +++LPE +     + +LDV  N L  
Sbjct: 190 LLRVLDLEDNQLQKMPDSLHKCLTLRRLNVRHNKLSTLPESIGHLKNLLELDVRSNDLKE 249

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           L                        PE++ ++  L RLDL  N  L IP
Sbjct: 250 L------------------------PESLLAMESLERLDLRWNHELKIP 274


>gi|397497384|ref|XP_003819491.1| PREDICTED: protein scribble homolog isoform 3 [Pan paniscus]
          Length = 1662

 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 167/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTH 379



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|397497380|ref|XP_003819489.1| PREDICTED: protein scribble homolog isoform 1 [Pan paniscus]
          Length = 1637

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 167/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTH 379



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|418735798|ref|ZP_13292203.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748526|gb|EKR01425.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 264

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 123/250 (49%), Gaps = 46/250 (18%)

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L E L+N   + +L++S+ +L+ LP  IGEL  L+ L++  N +  +P+EIG    L + 
Sbjct: 34  LTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGELQNLREL 93

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           + + NQLK LP  +G+  NL + + + N + +LP ++ +   ++ LD+  N+L       
Sbjct: 94  NLTKNQLKTLPKEIGKLQNLRELRLAENQLKTLPNEIGELQNLTILDLRNNELKT----- 148

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
                              +P+ IG L  L  LDLH N++ ++P  I    +L +  +  
Sbjct: 149 -------------------IPKDIGKLKNLTVLDLHINQLTTLPKEIGKLKNLTKLDLNY 189

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           N L+ LP E+G+L K                      L++LDL NN L  LP EIGK+  
Sbjct: 190 NELTTLPKEIGELQK----------------------LTILDLRNNELKTLPNEIGKLKE 227

Query: 300 LRKLLLTGNP 309
           LRKL L   P
Sbjct: 228 LRKLYLDDIP 237



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 113/233 (48%), Gaps = 29/233 (12%)

Query: 28  VYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAI 87
            Y N  EA +        D++ L L++  +  L +++  L  L +LN+  N+L+ LP  I
Sbjct: 30  TYHNLTEALQN-----PTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEI 84

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GEL  L+ L+++ N +  +P EIG    L +   + NQLK LP+ +G   NL+     NN
Sbjct: 85  GELQNLRELNLTKNQLKTLPKEIGKLQNLRELRLAENQLKTLPNEIGELQNLTILDLRNN 144

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            + ++P+D+     ++ LD+  N+LT L                        P+ IG L 
Sbjct: 145 ELKTIPKDIGKLKNLTVLDLHINQLTTL------------------------PKEIGKLK 180

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
            L +LDL+ N + ++P  I     L    + NN L  LP E+GKL +L  L L
Sbjct: 181 NLTKLDLNYNELTTLPKEIGELQKLTILDLRNNELKTLPNEIGKLKELRKLYL 233



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 96/170 (56%), Gaps = 2/170 (1%)

Query: 145 SNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           SN  +T+LP+++ +   +  L++  N+LT L N  I     L EL  +KN L  +P+ IG
Sbjct: 50  SNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNE-IGELQNLRELNLTKNQLKTLPKEIG 108

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            L  L  L L +N++ ++P+ I    +L    + NN L  +P ++GKL  L  LDLH NQ
Sbjct: 109 KLQNLRELRLAENQLKTLPNEIGELQNLTILDLRNNELKTIPKDIGKLKNLTVLDLHINQ 168

Query: 265 LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L     E  +L+ L+ LDL+ N L+ LP EIG++  L  L L  N L+TL
Sbjct: 169 LTTLPKEIGKLKNLTKLDLNYNELTTLPKEIGELQKLTILDLRNNELKTL 218



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 91/177 (51%), Gaps = 3/177 (1%)

Query: 139 LSDFKASN-NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLN 197
           LS  KA       +L E L + + +  LD+   +LT L    I     L  L   +N L 
Sbjct: 20  LSQLKAQEIGTYHNLTEALQNPTDVRILDLSNKRLTTLPKE-IGELQNLRILNLYRNQLT 78

Query: 198 GMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT 257
            +P  IG L  L  L+L +N++ ++P  I    +L E  +  N L  LP E+G+L  L  
Sbjct: 79  TLPNEIGELQNLRELNLTKNQLKTLPKEIGKLQNLRELRLAENQLKTLPNEIGELQNLTI 138

Query: 258 LDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           LDL +N+LK    +  +L+ L+VLDL  N L+ LP EIGK+  L KL L  N L TL
Sbjct: 139 LDLRNNELKTIPKDIGKLKNLTVLDLHINQLTTLPKEIGKLKNLTKLDLNYNELTTL 195



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 102/217 (47%), Gaps = 37/217 (17%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+ IG L  L  L+L++N++ ++P+ I    +L E  +  N L  LP E+GKL  L
Sbjct: 54  LTTLPKEIGELQNLRILNLYRNQLTTLPNEIGELQNLRELNLTKNQLKTLPKEIGKLQNL 113

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L  NQLK    E  +L+ L++LDL NN L  +P +IGK+  L  L L  N L TL 
Sbjct: 114 RELRLAENQLKTLPNEIGELQNLTILDLRNNELKTIPKDIGKLKNLTVLDLHINQLTTL- 172

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                   P  +  L++                     T+L +   EL+        +P 
Sbjct: 173 --------PKEIGKLKN--------------------LTKLDLNYNELT-------TLPK 197

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           EI E  ++T LDL  N ++ LP E+     L+  + D
Sbjct: 198 EIGELQKLTILDLRNNELKTLPNEIGKLKELRKLYLD 234



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 13/166 (7%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL    L  +PNE+              E  +L++L L  N ++ L +++  L  L  L
Sbjct: 70  LNLYRNQLTTLPNEI-------------GELQNLRELNLTKNQLKTLPKEIGKLQNLREL 116

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            ++ N+L  LP  IGEL  L  LD+  N +  IP +IG    L   D   NQL  LP  +
Sbjct: 117 RLAENQLKTLPNEIGELQNLTILDLRNNELKTIPKDIGKLKNLTVLDLHINQLTTLPKEI 176

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           G+  NL+    + N +T+LP+++ +  K++ LD+  N+L  L N +
Sbjct: 177 GKLKNLTKLDLNYNELTTLPKEIGELQKLTILDLRNNELKTLPNEI 222



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 82/192 (42%), Gaps = 54/192 (28%)

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGK 296
           + N  L+ LP E+G+L  L  L+L+ NQL                      + LP EIG+
Sbjct: 49  LSNKRLTTLPKEIGELQNLRILNLYRNQL----------------------TTLPNEIGE 86

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENE------------------ 337
           +  LR+L LT N L+TL   +        L+ LR  RL EN+                  
Sbjct: 87  LQNLRELNLTKNQLKTLPKEI------GKLQNLRELRLAENQLKTLPNEIGELQNLTILD 140

Query: 338 --DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
             ++E  T  +D I     L+V    L L    L+ +P EI +   +TKLDL+ N +  L
Sbjct: 141 LRNNELKTIPKD-IGKLKNLTV----LDLHINQLTTLPKEIGKLKNLTKLDLNYNELTTL 195

Query: 396 PPELSSCASLQV 407
           P E+     L +
Sbjct: 196 PKEIGELQKLTI 207



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 17/133 (12%)

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
           + +LDLSN  L+ LP EIG++  LR L L  N L TL + +        L+ LR      
Sbjct: 44  VRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEI------GELQNLR------ 91

Query: 337 EDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQE 394
              E + TK  L T+   +      +EL L    L  +P+EI E   +T LDL  N ++ 
Sbjct: 92  ---ELNLTKNQLKTLPKEIGKLQNLRELRLAENQLKTLPNEIGELQNLTILDLRNNELKT 148

Query: 395 LPPELSSCASLQV 407
           +P ++    +L V
Sbjct: 149 IPKDIGKLKNLTV 161


>gi|410042298|ref|XP_003951409.1| PREDICTED: protein scribble homolog isoform 3 [Pan troglodytes]
 gi|410257938|gb|JAA16936.1| scribbled homolog [Pan troglodytes]
          Length = 1662

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 167/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTH 379



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|149019124|gb|EDL77765.1| similar to RIKEN cDNA A430093J20 gene, isoform CRA_b [Rattus
           norvegicus]
          Length = 524

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 165/351 (47%), Gaps = 44/351 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQVADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I S+P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-------------------------SNNSLSGL 290
             LD+  N+L+    E   L +S+ DL                           N L+ L
Sbjct: 223 LCLDVSENRLERLPEEISGL-ISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQL 281

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P  IG    L +L+LT N L TL +S+        LK L + L  + +   S  KE  I 
Sbjct: 282 PEAIGDCENLTELVLTENRLLTLPTSI------GKLKKLNN-LNADRNKLVSLPKE--IG 332

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
               L+V      +    L+ IPSE+ +A E+  LD++ N +  LP  L++
Sbjct: 333 GCCSLTV----FCIRDNRLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTT 379



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +   ++L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+LT L    I     LTEL+ ++N L  +P +IG L +L  L+  +N+++S+P  
Sbjct: 272 KLDQNRLTQLP-EAIGDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +P+E+ +  +L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCIRDNRLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTLKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 72/128 (56%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           + L  L+++ N +E + + +  L  L++L +  N+L++LP AIG+   L  L ++ N ++
Sbjct: 243 ISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLL 302

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    L   +   N+L  LP  +G C +L+ F   +N +T +P +++   ++  
Sbjct: 303 TLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCIRDNRLTRIPSEVSQAMELHV 362

Query: 165 LDVEGNKL 172
           LDV GN+L
Sbjct: 363 LDVAGNRL 370



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 104/234 (44%), Gaps = 22/234 (9%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE--DSEASTTKEDLITMATRLSVTSKEL 362
           L  N L  L         P  L  LR RL E +  ++E  +  E +  +     +  K+L
Sbjct: 158 LRENLLTYL---------PDSLTQLR-RLEELDLGNNEIYSLPESIGAL-----LHLKDL 202

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
            L+G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 203 WLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISL----TDLVVSQ 252


>gi|402879350|ref|XP_003903306.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Papio
           anubis]
          Length = 1662

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 167/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++PD      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN L++L  +L +
Sbjct: 323 HLETLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTH 379



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 159/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLMALPR 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLETLPPEIGGCVALSV 339



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLETLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|330804386|ref|XP_003290176.1| hypothetical protein DICPUDRAFT_36946 [Dictyostelium purpureum]
 gi|325079687|gb|EGC33275.1| hypothetical protein DICPUDRAFT_36946 [Dictyostelium purpureum]
          Length = 343

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 140/264 (53%), Gaps = 10/264 (3%)

Query: 14  LNLSNRSLRDVPN-EVYKNFDEA----GEGDKWWEAVD----LQKLILAHNNIEKLKEDL 64
           L++ +  ++++PN E  +  DE      +  K+  ++     L+ L L++N +  +   L
Sbjct: 74  LHIEDNKIQEIPNLEPLEQLDELILSNNDISKFQVSISKLPSLRVLDLSYNQLGTIPVRL 133

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
            +L  L VL + HN+ S  P+ + EL  L +L  S N++  IP +IG  T L K   S N
Sbjct: 134 FSLSSLRVLILDHNQFSHFPSHLCELQQLNTLGFSDNALKSIPSQIGQMTGLKKLILSGN 193

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL+ +P+ +    +L+    S+NC+TSLP +      +  L ++ N+L  + + +    T
Sbjct: 194 QLESVPTEISLLKSLTYLDLSSNCLTSLPSEYGKLCGLEYLLLQHNRLRQIPDEIAVGCT 253

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L  + N L  +P TIG LS +  L L +NR+ ++P+ I  C  L + ++  N + +
Sbjct: 254 SLVSLRVNNNTLTVLPSTIGQLSHMSELYLQENRLTTLPAEIGSCVLLKKLHLEYNKIIS 313

Query: 245 LP-AELGKLSKLGTLDLHSNQLKE 267
           LP  E+ KL+ L  L LH NQL+E
Sbjct: 314 LPDEEMSKLNCLNVLTLHDNQLEE 337



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 100/189 (52%), Gaps = 14/189 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L  S+ +L+ +P+++              +   L+KLIL+ N +E +  ++  L  LT 
Sbjct: 164 TLGFSDNALKSIPSQI-------------GQMTGLKKLILSGNQLESVPTEISLLKSLTY 210

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG-SATALVKFDCSSNQLKELPS 131
           L++S N L+ LP+  G+L  L+ L +  N + +IPDEI    T+LV    ++N L  LPS
Sbjct: 211 LDLSSNCLTSLPSEYGKLCGLEYLLLQHNRLRQIPDEIAVGCTSLVSLRVNNNTLTVLPS 270

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           ++G+  ++S+     N +T+LP ++  C  + KL +E NK+  L +  ++    L  L  
Sbjct: 271 TIGQLSHMSELYLQENRLTTLPAEIGSCVLLKKLHLEYNKIISLPDEEMSKLNCLNVLTL 330

Query: 192 SKNLLNGMP 200
             N L  +P
Sbjct: 331 HDNQLEELP 339



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 141/307 (45%), Gaps = 37/307 (12%)

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPS---SLGRCLNLSDFKASNNCITSLPEDLADC 159
           ++K+  E  S + L    C   +LK LPS   +LG   NL      +N I  +P +L   
Sbjct: 37  LIKLLKENSSISNLTIKSC---RLKVLPSEISTLGG--NLKKLHIEDNKIQEIP-NLEPL 90

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTM-------LTELIASKNLLNGMPETIGSLSRLIRL 212
            ++ +L        +LSNN I+ + +       L  L  S N L  +P  + SLS L  L
Sbjct: 91  EQLDEL--------ILSNNDISKFQVSISKLPSLRVLDLSYNQLGTIPVRLFSLSSLRVL 142

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  N+    PS +     L      +NAL ++P+++G+++ L  L L  NQL+    E 
Sbjct: 143 ILDHNQFSHFPSHLCELQQLNTLGFSDNALKSIPSQIGQMTGLKKLILSGNQLESVPTEI 202

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
             L+ L+ LDLS+N L+ LP E GK+  L  LLL  N LR +   +  G T      +  
Sbjct: 203 SLLKSLTYLDLSSNCLTSLPSEYGKLCGLEYLLLQHNRLRQIPDEIAVGCT----SLVSL 258

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
           R+  N  +   +T   L  M+        EL L+   L+ +P+EI     + KL L  N 
Sbjct: 259 RVNNNTLTVLPSTIGQLSHMS--------ELYLQENRLTTLPAEIGSCVLLKKLHLEYNK 310

Query: 392 IQELPPE 398
           I  LP E
Sbjct: 311 IISLPDE 317



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 84/213 (39%), Gaps = 39/213 (18%)

Query: 196 LNGMPETIGSLS-RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P  I +L   L +L +  N+I  IP+ +     L E  + NN +S     + KL  
Sbjct: 57  LKVLPSEISTLGGNLKKLHIEDNKIQEIPN-LEPLEQLDELILSNNDISKFQVSISKLPS 115

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL  NQL    V    L  L VL L +N  S  P  + ++  L  L  + N L+++
Sbjct: 116 LRVLDLSYNQLGTIPVRLFSLSSLRVLILDHNQFSHFPSHLCELQQLNTLGFSDNALKSI 175

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
            S +  G    L                                  K+L L G  L ++P
Sbjct: 176 PSQI--GQMTGL----------------------------------KKLILSGNQLESVP 199

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +EI     +T LDLS N +  LP E      L+
Sbjct: 200 TEISLLKSLTYLDLSSNCLTSLPSEYGKLCGLE 232


>gi|89271872|emb|CAJ81921.1| erbb2 interacting protein [Xenopus (Silurana) tropicalis]
          Length = 504

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 181/400 (45%), Gaps = 52/400 (13%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  SL+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTSLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  L
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFL 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+N++  LP  IG +  L  L +  
Sbjct: 227 GNLKQLTYLDVSKNNIEMVEDGISGCE-SLQDLLLSSNAIQQLPESIGALKKLTTLKVDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+  G   A+           ED + S  + + +  +    +  +  + +  
Sbjct: 286 NQLMYLPDSI--GGLTAI-----------EDLDCSFNEIEALPSSIGHLIQIRTFAADHN 332

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            L+ +P EI      T L L  N ++ LP E+     L+V
Sbjct: 333 FLTQLPPEIGTWKSATVLFLHSNKLESLPEEMGDMQKLKV 372



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 149/298 (50%), Gaps = 25/298 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLD 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  L +  +++ LDV  N + ++ +  I+    L +L+ S N +  +PE
Sbjct: 212 FWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDG-ISGCESLQDLLLSSNAIQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
           +IG+L +L  L + +N+++ +P SI G  ++ +     N + ALP+ +G L ++ T    
Sbjct: 271 SIGALKKLTTLKVDENQLMYLPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAAD 330

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            N L +   E    +  +VL L +N L  LP E+G M  L+ + L+ N LR L  S  
Sbjct: 331 HNFLTQLPPEIGTWKSATVLFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLPFSFT 388



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 128/268 (47%), Gaps = 6/268 (2%)

Query: 26  NEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPA 85
           N+ + +F  A  G        LQ L L  N ++ L + +  L  L  L++  N+ +E+P 
Sbjct: 146 NDAFLDFLPANFG----RLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPE 201

Query: 86  AIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKAS 145
            + +L  LK   +  N +  IP  +G+   L   D S N ++ +   +  C +L D   S
Sbjct: 202 VLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLLS 261

Query: 146 NNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +N I  LPE +    K++ L V+ N+L  L ++ I   T + +L  S N +  +P +IG 
Sbjct: 262 SNAIQQLPESIGALKKLTTLKVDENQLMYLPDS-IGGLTAIEDLDCSFNEIEALPSSIGH 320

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
           L ++       N +  +P  I    S    ++ +N L +LP E+G + KL  ++L  N+L
Sbjct: 321 LIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLESLPEEMGDMQKLKVINLSDNRL 380

Query: 266 KEYCVEACQL-RLSVLDLSNNSLSGLPP 292
           +       +L +L+ + LS+N    L P
Sbjct: 381 RNLPFSFTRLQQLTAMWLSDNQSKPLIP 408



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 42/240 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTI 83

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LPA +  L  L  LD+  N ++E+   ++ C++ L++++ S N +S LP    ++  L +
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L                  A L +L    P N                T+L +    L
Sbjct: 143 LYLND----------------AFLDFL----PAN------------FGRLTKLQI----L 166

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG 422
            L    L  +P  +    ++ +LDL  N   E+P  L   + L+  + D   NK + I G
Sbjct: 167 ELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD--GNKLTYIPG 224


>gi|417770639|ref|ZP_12418545.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|409947411|gb|EKN97409.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
          Length = 332

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 86/243 (35%), Positives = 122/243 (50%), Gaps = 2/243 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VL++S  KL  LP  IG+L  L+ L + +N +  +P EI     L      SN+L  LP 
Sbjct: 51  VLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPK 110

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL      +N +T LP+++     +  L +  N+LT LS + I     L  L  
Sbjct: 111 EIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKD-IEQLQNLKSLDL 169

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P  I  L  L  L L +N+  + P  I    +L   ++ NN L+ LP E+ K
Sbjct: 170 SNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTILPNEIAK 229

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L KL  L L  NQL     E  QL+ L  LDLS N L+ LP E+G++  L+ L L  N L
Sbjct: 230 LKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQL 289

Query: 311 RTL 313
           +TL
Sbjct: 290 KTL 292



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 126/258 (48%), Gaps = 9/258 (3%)

Query: 61  KEDLRNLPL-------LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSA 113
           ++ L+ LP+       L  L + +N+L+ LP  I +L  L+ L +  N +  +P EI   
Sbjct: 56  RQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQL 115

Query: 114 TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
             L   D  SNQL  LP  + +  NL      +N +T+L +D+     +  LD+  N+LT
Sbjct: 116 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLT 175

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            L N  I     L  L  S+N     P+ IG L  L  L L+ N++  +P+ I+    L 
Sbjct: 176 TLPNE-IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQ 234

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
             Y+ +N L  LP E+ +L  L +LDL  NQL     E  QL  L  LDL NN L  LP 
Sbjct: 235 YLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPN 294

Query: 293 EIGKMTTLRKLLLTGNPL 310
           EI ++  L+ L L  N L
Sbjct: 295 EIEQLKNLQTLYLNNNQL 312



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 134/287 (46%), Gaps = 35/287 (12%)

Query: 14  LNLSNRSLRDVPNEV---------YKNFDEAGEGDKWWEAV-DLQKLILAHNNIEKLKED 63
           L+LS + L+ +P E+         Y ++++     +  E + +LQ L L  N +  L ++
Sbjct: 52  LDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKE 111

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL++  N+L+ LP  I +L  L+ L +  N +  +  +I     L   D S+
Sbjct: 112 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSN 171

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ + +  NL     S N   + P+++     +  L +  N+LT+L        
Sbjct: 172 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTIL-------- 223

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P  I  L +L  L L  N+++++P  I    +L    +  N L+
Sbjct: 224 ----------------PNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLT 267

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
            LP E+G+L  L TLDL +NQLK    E  QL+ L  L L+NN LS 
Sbjct: 268 ILPKEVGQLENLQTLDLRNNQLKTLPNEIEQLKNLQTLYLNNNQLSS 314



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 135/318 (42%), Gaps = 61/318 (19%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ LD+S   +  +P EIG    L +     NQL  LP  + +  NL      +N +T+L
Sbjct: 49  VRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 108

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     +  LD+  N+LTVL                        P+ I  L  L  L
Sbjct: 109 PKEIEQLKNLQVLDLGSNQLTVL------------------------PQEIEQLKNLQLL 144

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            L  NR+ ++   I    +L    + NN L+ LP E+ +L  L +L L  NQ   +  E 
Sbjct: 145 YLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 204

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L VL L+NN L+ LP EI K+  L+ L L+ N L TL         P  ++ L++
Sbjct: 205 GQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDNQLITL---------PKEIEQLKN 255

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                       K L L    L+ +P E+ +   +  LDL  N 
Sbjct: 256 ---------------------------LKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQ 288

Query: 392 IQELPPELSSCASLQVKF 409
           ++ LP E+    +LQ  +
Sbjct: 289 LKTLPNEIEQLKNLQTLY 306



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/210 (32%), Positives = 104/210 (49%), Gaps = 3/210 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L +  N+L+ L   I +L  LKSLD+S N +  
Sbjct: 117 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 176

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P+EI     L     S NQ    P  +G+  NL     +NN +T LP ++A   K+  L
Sbjct: 177 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYL 236

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N+L  L    I     L  L  S N L  +P+ +G L  L  LDL  N++ ++P+ 
Sbjct: 237 YLSDNQLITLPKE-IEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPNE 295

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           I    +L   Y+ NN LS+   E  K+ KL
Sbjct: 296 IEQLKNLQTLYLNNNQLSS--EEKEKIRKL 323



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 10/149 (6%)

Query: 13  SLNLSNRSLRDVPNEV--YKNFDEAGEGDKWW--------EAVDLQKLILAHNNIEKLKE 62
           SL+LSN  L  +PNE+   KN       +  +        +  +L+ L L +N +  L  
Sbjct: 166 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTILPN 225

Query: 63  DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCS 122
           ++  L  L  L +S N+L  LP  I +L  LKSLD+S+N +  +P E+G    L   D  
Sbjct: 226 EIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLR 285

Query: 123 SNQLKELPSSLGRCLNLSDFKASNNCITS 151
           +NQLK LP+ + +  NL     +NN ++S
Sbjct: 286 NNQLKTLPNEIEQLKNLQTLYLNNNQLSS 314



 Score = 42.7 bits (99), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 68/169 (40%), Gaps = 35/169 (20%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR-- 332
           L + VLDLS   L  LP EIG++  L++L L  N L  L   +       LL YLRS   
Sbjct: 47  LEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLL-YLRSNRL 105

Query: 333 --LPEN---------------------EDSEASTTKEDLITMATRLSVTSKE-------- 361
             LP+                      ++ E     + L   + RL+  SK+        
Sbjct: 106 TTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLK 165

Query: 362 -LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            L L    L+ +P+EI +   +  L LS N     P E+    +L+V F
Sbjct: 166 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLF 214


>gi|359072215|ref|XP_003586928.1| PREDICTED: protein scribble homolog isoform 2 [Bos taurus]
          Length = 1606

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++P+      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTH 379



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 160/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LPE       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPEGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPH 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|260788664|ref|XP_002589369.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
 gi|229274546|gb|EEN45380.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
          Length = 869

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 184/427 (43%), Gaps = 50/427 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN+ L  +P EV+             +  DL+ L ++ N +  + E +  L  L+ L
Sbjct: 33  LDLSNQGLTSIPEEVF-------------DITDLEFLDVSRNKLTSIPEAIGRLQKLSRL 79

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +   N L+ LP AIG L  L  L V  N +  +P  I     L       NQL E+PS +
Sbjct: 80  DAYSNMLTCLPQAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIYDNQLTEVPSGV 139

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL     SNN +++ P  +    K+ KL ++ N+LT + +  + S   L  L  S 
Sbjct: 140 CSLPNLEVLSVSNNKLSTFPPGVEKLQKLRKLFIKDNQLTEVPSG-VCSLPNLEVLNVSN 198

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS-------------LAEFYMG-- 238
           N L+  P  +  L +L  L ++ N++  +P   SG CS             L+ F  G  
Sbjct: 199 NKLSTFPPGVEKLQKLKELGIYDNQLTEVP---SGVCSLPNLEVLNVYNNKLSTFPPGVK 255

Query: 239 --NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
             NN LS  P  + KL KL  L ++ NQL E     C L  L  L   NN LS  PP + 
Sbjct: 256 CHNNKLSTFPPGVEKLQKLKELGIYDNQLTEVPSGVCSLPNLEKLSAYNNKLSTFPPGVE 315

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           K+  LR+L +  N L  + S + + P   +L    ++L     S      E L  +    
Sbjct: 316 KLQKLRELYIYDNQLTEVPSGVCSLPNLEMLGVYNNKL-----STFPPGVEKLQKL---- 366

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF--SDLV 413
               +EL +    L+ +PS +     +  L +  N +   PP +     L+  +   + +
Sbjct: 367 ----RELYIYDNQLTEVPSGVCSLPNLEMLSVCNNKLSTFPPGVEKLQKLRKLYINDNQL 422

Query: 414 TNKESCI 420
           T   SC+
Sbjct: 423 TEVPSCV 429



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 133/300 (44%), Gaps = 19/300 (6%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           +K D S+  L  +P  +    +L     S N +TS+PE +    K+S+LD   N LT L 
Sbjct: 31  LKLDLSNQGLTSIPEEVFDITDLEFLDVSRNKLTSIPEAIGRLQKLSRLDAYSNMLTCLP 90

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
              I S   LT L   +N L  +P  I  L +L  L ++ N++  +PS +    +L    
Sbjct: 91  -QAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIYDNQLTEVPSGVCSLPNLEVLS 149

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           + NN LS  P  + KL KL  L +  NQL E     C L  L VL++SNN LS  PP + 
Sbjct: 150 VSNNKLSTFPPGVEKLQKLRKLFIKDNQLTEVPSGVCSLPNLEVLNVSNNKLSTFPPGVE 209

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           K+  L++L +  N L  + S + + P   +L    ++L        ST    +     +L
Sbjct: 210 KLQKLKELGIYDNQLTEVPSGVCSLPNLEVLNVYNNKL--------STFPPGVKCHNNKL 261

Query: 356 SVTS---------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           S            KEL +    L+ +PS +     + KL    N +   PP +     L+
Sbjct: 262 STFPPGVEKLQKLKELGIYDNQLTEVPSGVCSLPNLEKLSAYNNKLSTFPPGVEKLQKLR 321



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 139/327 (42%), Gaps = 23/327 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L + +N +      +  L  L  L +  N+L+E+P+ +  L  L+ L V  N +  
Sbjct: 342 NLEMLGVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEMLSVCNNKLST 401

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P  +     L K   + NQL E+PS +    NL       N I  LP+D+   +++  L
Sbjct: 402 FPPGVEKLQKLRKLYINDNQLTEVPSCVCSLPNLEVLSVGPNPIRRLPDDVTRLARLKTL 461

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V G +       ++   T L EL A     + +P+ +G+L  L  L L  N + ++PS+
Sbjct: 462 SVPGCQFDEFPRQVLQLKT-LEELYAGGCKFDIVPDEVGNLQHLWHLSLDINLLRTLPST 520

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           +S   +L    +  N     P  L +L  +  L++                       NN
Sbjct: 521 MSHLHNLRVVRLNKNKFDTFPEVLCELPAMEKLNIR----------------------NN 558

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
           +++ LP  + +   L+ L ++GNP+      +    T A++ +L+    ++E   ++  +
Sbjct: 559 NITRLPTALHRADKLKDLNVSGNPMSYPPQEVRKQGTGAIMAFLKQEAEKDERILSAFNR 618

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAI 372
             +    T+    ++ L L    + AI
Sbjct: 619 LSVRMSQTQWKPLARSLGLSNRAVDAI 645



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 93/249 (37%), Gaps = 63/249 (25%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           LN  P+T+      ++LDL    + SIP  +     L    +  N L+++P  +G+L KL
Sbjct: 20  LNLQPQTVNGR---LKLDLSNQGLTSIPEEVFDITDLEFLDVSRNKLTSIPEAIGRLQKL 76

Query: 256 GTLDLHS----------------------------------------------NQLKEYC 269
             LD +S                                              NQL E  
Sbjct: 77  SRLDAYSNMLTCLPQAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIYDNQLTEVP 136

Query: 270 VEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKY 328
              C L  L VL +SNN LS  PP + K+  LRKL +  N L  + S + + P   +L  
Sbjct: 137 SGVCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRKLFIKDNQLTEVPSGVCSLPNLEVLNV 196

Query: 329 LRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLS 388
             ++L     S      E L  +        KEL +    L+ +PS +     +  L++ 
Sbjct: 197 SNNKL-----STFPPGVEKLQKL--------KELGIYDNQLTEVPSGVCSLPNLEVLNVY 243

Query: 389 RNSIQELPP 397
            N +   PP
Sbjct: 244 NNKLSTFPP 252


>gi|359072211|ref|XP_003586927.1| PREDICTED: protein scribble homolog isoform 1 [Bos taurus]
          Length = 1631

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++P+      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQA 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN L++L  +L +
Sbjct: 323 HLEALPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTH 379



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 160/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LPE       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPEGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPH 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEALPPEIGGCVALSV 339



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 293 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEALPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|194215174|ref|XP_001916975.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Equus
           caballus]
          Length = 1642

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 168/358 (46%), Gaps = 59/358 (16%)

Query: 20  SLRDVPNEVYK----------NFDEAGEGDK-WWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           SL+ VP E+Y+          + ++  E  K ++  ++L+KL L+ N I++L  ++ N  
Sbjct: 23  SLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L+VS N + E+P +I     L+  D S N + ++P+      +L     +   L+ 
Sbjct: 83  QLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQS 142

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA------- 181
           LP  +G   NL   +   N + SLP  L+   K+ +LD+ GN L VL + L A       
Sbjct: 143 LPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLREL 202

Query: 182 -------------------------SWTMLTELIA-------------SKNLLNGMPETI 203
                                    S   L EL A             S+NLL  +P+ I
Sbjct: 203 WLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGI 262

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L +L  L + QNR+  +  +I  C +L+E  +  N L+ALP  LGKL+KL  L++  N
Sbjct: 263 GQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRN 322

Query: 264 QLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+    E   C + LSVL L +N L+ LPPE+     L  L + GN L++L  +L +
Sbjct: 323 HLEVLPPEIGGC-VALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTH 379



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 160/333 (48%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LPE       ++ L +    L  L  + + +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPEGFTQLRSLAHLALNDVSLQSLPGD-VGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L
Sbjct: 163 LKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E   L L    L S N L  LP  IG++  L              
Sbjct: 223 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++RL   E +EA    E+L            EL L    L+A+P 
Sbjct: 269 ---------SILKVDQNRL--CEVTEAIGDCENL-----------SELILTENLLTALPH 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN ++ LPPE+  C +L V
Sbjct: 307 SLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSV 339



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 118/241 (48%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 174 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 233

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 234 ELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 292

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N +  +P 
Sbjct: 293 -----------------------ELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 330 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTHLNLKALWLAE 389

Query: 285 N 285
           N
Sbjct: 390 N 390


>gi|242040121|ref|XP_002467455.1| hypothetical protein SORBIDRAFT_01g028430 [Sorghum bicolor]
 gi|241921309|gb|EER94453.1| hypothetical protein SORBIDRAFT_01g028430 [Sorghum bicolor]
          Length = 538

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 142/299 (47%), Gaps = 4/299 (1%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           + +E L   L  L  +T L++S N++  LP+ IG L  L  LD+  N ++ +PD  G  +
Sbjct: 221 DQVEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDTFGELS 280

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L+  D  +NQLK LP+S G   +L++   S+N +  LP+ L     + +L  E N+L  
Sbjct: 281 CLIDLDLRANQLKSLPTSFGNLTSLANLDLSSNLLKVLPDCLGKLKNLRRLIAETNELEE 340

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I S T L EL    N L  +PE IG L  L  L LH NRI  +P++I     L E
Sbjct: 341 LPYT-IGSCTSLVELRLDFNQLKALPEAIGKLENLEILTLHYNRIKGLPTTIGHLTRLRE 399

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSN--QLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
             +  N +  +P  +   + L  L++  N   L+       +L  L  LD+S+N +  LP
Sbjct: 400 LDVSFNEVETIPENICFAASLVKLNVSRNFADLRALPKSIGELEMLEELDISSNQIRVLP 459

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
              G ++ LR       PL      +V      L+ Y+++ +   E S+  T K    T
Sbjct: 460 DSFGHLSKLRVFHADETPLEVPPKEVVKLGAQELVNYMKNMVAAREVSQNQTNKRSFWT 518



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 132/306 (43%), Gaps = 57/306 (18%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  +G    + + D S N++  LPS++G    L+     +N + +LP+   + S +  L
Sbjct: 226 LPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDTFGELSCLIDL 285

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  N+L  L  +   + T L  L  S NLL  +P+ +G L  L RL    N +  +P +
Sbjct: 286 DLRANQLKSLPTSF-GNLTSLANLDLSSNLLKVLPDCLGKLKNLRRLIAETNELEELPYT 344

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I  C SL E  +  N L ALP  +GKL  L  L LH N++K                   
Sbjct: 345 IGSCTSLVELRLDFNQLKALPEAIGKLENLEILTLHYNRIK------------------- 385

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
              GLP  IG +T LR+L ++ N + T+                    PEN    AS  K
Sbjct: 386 ---GLPTTIGHLTRLRELDVSFNEVETI--------------------PENICFAASLVK 422

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            ++              S    +L A+P  I E   + +LD+S N I+ LP      + L
Sbjct: 423 LNV--------------SRNFADLRALPKSIGELEMLEELDISSNQIRVLPDSFGHLSKL 468

Query: 406 QVKFSD 411
           +V  +D
Sbjct: 469 RVFHAD 474



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 3/217 (1%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + E   L  L L  N ++ L     NL  L  L++S N L  LP  +G+L  L+ L  
Sbjct: 274 DTFGELSCLIDLDLRANQLKSLPTSFGNLTSLANLDLSSNLLKVLPDCLGKLKNLRRLIA 333

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N + ++P  IGS T+LV+     NQLK LP ++G+  NL       N I  LP  +  
Sbjct: 334 ETNELEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLENLEILTLHYNRIKGLPTTIGH 393

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL--LNGMPETIGSLSRLIRLDLHQ 216
            +++ +LDV  N++  +  N+  + + L +L  S+N   L  +P++IG L  L  LD+  
Sbjct: 394 LTRLRELDVSFNEVETIPENICFAAS-LVKLNVSRNFADLRALPKSIGELEMLEELDISS 452

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N+I  +P S      L  F+     L   P E+ KL 
Sbjct: 453 NQIRVLPDSFGHLSKLRVFHADETPLEVPPKEVVKLG 489


>gi|341895737|gb|EGT51672.1| CBN-SOC-2 protein [Caenorhabditis brenneri]
          Length = 368

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 174/344 (50%), Gaps = 25/344 (7%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L+V  NK+ ELP+AIG+L  L    VS+N + ++P+EIG   +L + D   N L ELP 
Sbjct: 1   MLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECQSLTQLDLQHNDLSELPY 60

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
           S+G+  +L       N I  +P +L +C ++ +  VE N L +L  NL+     +  +  
Sbjct: 61  SIGKLTSLVRIGIRYNKIRCIPSELENCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNL 120

Query: 192 SKNLLNGMPETIGSLSRLI---RLDLHQNRILSIPSSI-SGCCSLAEFYMGNNALSALPA 247
           S+N L   P   G   + +    +++  N+I  IP  I S    L +  +  N L +LP 
Sbjct: 121 SRNELTAFPA--GGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPL 178

Query: 248 ELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLT 306
           ++G  + +  L+L +NQLK    +  +L  L +L LSNN L  LP +IG +  LR+L L 
Sbjct: 179 DMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLE 238

Query: 307 GNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLS--VTSKELSL 364
            N L T+ + +        L++L         ++       ++T+   +    + ++L L
Sbjct: 239 ENELETVPTEI------GFLQHL---------TKLWVQSNKIVTLPRSIGNLCSLQDLRL 283

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNS-IQELPPELSSCASLQV 407
              NL+AIP EI     +  L L+ NS +  LP EL+ C SL++
Sbjct: 284 GENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEI 327



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 143/293 (48%), Gaps = 27/293 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF--NS 102
            L++ I+  N+++ L  +L   LP +  +N+S N+L+  PA  G    + ++ ++   N 
Sbjct: 90  QLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAG-GPQQFVSTVTINMEHNQ 148

Query: 103 IMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
           I KIP  I S AT L K +   N+L  LP  +G   ++++   S N +  LPED+     
Sbjct: 149 ISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVN 208

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L +  N+L  L N  I +   L EL   +N L  +P  IG L  L +L +  N+I++
Sbjct: 209 LEILVLSNNQLKKLPNQ-IGNLKKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKIVT 267

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLD 281
           +P SI   CSL +  +G N L+A+P E+G L  L +L L+ N                  
Sbjct: 268 LPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDN------------------ 309

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
              +SL  LP E+    +L  + +  +PL  +   +  G    +++YL+ + P
Sbjct: 310 ---SSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGP 359



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 139/309 (44%), Gaps = 56/309 (18%)

Query: 39  DKWWEAVDLQKLILAHNNIEKL-----------------------KEDLRN--------- 66
           ++  E   L +L L HN++ +L                         +L N         
Sbjct: 37  EEIGECQSLTQLDLQHNDLSELPYSIGKLTSLVRIGIRYNKIRCIPSELENCQQLEEFIV 96

Query: 67  ---------------LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF--NSIMKIPDE 109
                          LP +  +N+S N+L+  PA  G    + ++ ++   N I KIP  
Sbjct: 97  ESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAG-GPQQFVSTVTINMEHNQISKIPIG 155

Query: 110 IGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           I S AT L K +   N+L  LP  +G   ++++   S N +  LPED+     +  L + 
Sbjct: 156 IFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLS 215

Query: 169 GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            N+L  L N  I +   L EL   +N L  +P  IG L  L +L +  N+I+++P SI  
Sbjct: 216 NNQLKKLPNQ-IGNLKKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKIVTLPRSIGN 274

Query: 229 CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE---YCVEACQLRLSVLDLSNN 285
            CSL +  +G N L+A+P E+G L  L +L L+ N       + +  CQ  L ++ + N+
Sbjct: 275 LCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQ-SLEIMSIENS 333

Query: 286 SLSGLPPEI 294
            LS +PPEI
Sbjct: 334 PLSQIPPEI 342


>gi|110825984|ref|NP_004216.2| malignant fibrous histiocytoma-amplified sequence 1 [Homo sapiens]
 gi|296437367|sp|Q9Y4C4.2|MFHA1_HUMAN RecName: Full=Malignant fibrous histiocytoma-amplified sequence 1;
           AltName: Full=Malignant fibrous histiocytoma-amplified
           sequence with leucine-rich tandem repeats 1
 gi|189442857|gb|AAI67810.1| Malignant fibrous histiocytoma amplified sequence 1 [synthetic
           construct]
          Length = 1052

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 143/295 (48%), Gaps = 28/295 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSI 103
           D++ L L +N +E++ E L + L  L VL +  N+ + LP A+ EL H L  LDVS N +
Sbjct: 64  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 104 MKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
             +  E+ SA   L K + S NQL  LP+ LG   +L +   S N +  LP+ L+  S++
Sbjct: 124 TALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRL 183

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    + ++
Sbjct: 184 RTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------- 275
           P+      SL    + NN L ALPA+   L +L  L+L SN  +E+      L       
Sbjct: 243 PAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELY 302

Query: 276 -----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                            RL  L L NN +  LP  I ++T L +L+L GN +  L
Sbjct: 303 LSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVL 357



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/280 (33%), Positives = 130/280 (46%), Gaps = 28/280 (10%)

Query: 66  NLPLLTVLNVSHNKLSE------------------------LPAAIGEL-HMLKSLDVSF 100
           NL  +  LN+ +N L E                        LP A+ EL H L  LDVS 
Sbjct: 61  NLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 120

Query: 101 NSIMKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           N +  +  E+ SA   L K + S NQL  LP+ LG   +L +   S N +  LP+ L+  
Sbjct: 121 NRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCL 180

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           S++  LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    +
Sbjct: 181 SRLRTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALRALKILWLSGAEL 239

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
            ++P+      SL    + NN L ALPA+   L +L  L+L SN  +E+      L  L 
Sbjct: 240 GTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLE 299

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L LS N L+ +P  I  +  L  L L  N +R L  S+V
Sbjct: 300 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIV 339



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 7/269 (2%)

Query: 46  DLQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            L +L ++HN +  L  E +  L  L  LN+SHN+L  LPA +G L  L+ LDVSFN + 
Sbjct: 112 HLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 171

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PD +   + L   D   NQL   P  L + + L +   S+N +  LPED++    +  
Sbjct: 172 HLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKI 231

Query: 165 LDVEGNKLTVLSNNL--IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           L + G +L  L      +AS   L  L+   N L  +P     L RL  L+L  N     
Sbjct: 232 LWLSGAELGTLPAGFCELAS---LESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEF 288

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P+++     L E Y+  N L+++P+ +  L +L TL L +N+++       +L  L  L 
Sbjct: 289 PAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELV 348

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  N ++ LP   G+++ +    +  NPL
Sbjct: 349 LQGNQIAVLPDHFGQLSRVGLWKIKDNPL 377



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 127/285 (44%), Gaps = 25/285 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL L+HN +  L   L  L  L  L+VS N+L+ LP ++  L  L++LDV  N +  
Sbjct: 136 ELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTA 195

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P ++    AL + D SSN+L+ LP  +     L     S   + +LP    + + +  L
Sbjct: 196 FPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESL 255

Query: 166 DVEGNKLTV---------------LSNNLIASWTM-------LTELIASKNLLNGMPETI 203
            ++ N L                 LS+NL   +         L EL  S+N L  +P  I
Sbjct: 256 MLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLI 315

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
             L RL+ L L  NRI  +P SI     L E  +  N ++ LP   G+LS++G   +  N
Sbjct: 316 SGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDN 375

Query: 264 QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            L +   E C   +  +      L+   P +       KLLL G+
Sbjct: 376 PLIQPPYEVCMKGIPYIAAYQKELAHSQPAVQPRL---KLLLMGH 417



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 140/310 (45%), Gaps = 51/310 (16%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPEDLADCSK-MS 163
           +P  +G   AL   +  +N L+E+P  LG  L +L       N    LP  +A+    ++
Sbjct: 58  LPANLGDIEAL---NLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLT 114

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +LDV  N+LT L   ++++   L +L  S N L  +P  +G+L+ L  LD+  NR+  +P
Sbjct: 115 ELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLP 174

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
            S+S  C                     LS+L TLD+  NQL  +  +  QL  L  LD+
Sbjct: 175 DSLS--C---------------------LSRLRTLDVDHNQLTAFPRQLLQLVALEELDV 211

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           S+N L GLP +I  +  L+ L L+G  L TL +          L  L S + +N   +A 
Sbjct: 212 SSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCE------LASLESLMLDNNGLQAL 265

Query: 343 TTKEDLITMATRLSVTS----------------KELSLEGMNLSAIPSEIWEAGEITKLD 386
             +   +     L+++S                +EL L    L+++PS I   G +  L 
Sbjct: 266 PAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLW 325

Query: 387 LSRNSIQELP 396
           L  N I+ LP
Sbjct: 326 LDNNRIRYLP 335



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 1/182 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L ++ N +  L ED+  L  L +L +S  +L  LPA   EL  L+SL +  N + 
Sbjct: 204 VALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQ 263

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P +      L   + SSN  +E P++L     L +   S N +TS+P  ++   ++  
Sbjct: 264 ALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLT 323

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L ++ N++  L ++++   T L EL+   N +  +P+  G LSR+    +  N ++  P 
Sbjct: 324 LWLDNNRIRYLPDSIV-ELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPY 382

Query: 225 SI 226
            +
Sbjct: 383 EV 384



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 21/177 (11%)

Query: 237 MGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 293
           +GNN L  +P  LG  L  L  L L  N+         +L   L+ LD+S+N L+ L  E
Sbjct: 70  LGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAE 129

Query: 294 I-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           +   +  LRKL L+ N L  L + L        L +L          E   +   L  + 
Sbjct: 130 VVSALRELRKLNLSHNQLPALPAQL------GALAHL---------EELDVSFNRLAHLP 174

Query: 353 TRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             LS  S+   L ++   L+A P ++ +   + +LD+S N ++ LP ++S+  +L++
Sbjct: 175 DSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKI 231


>gi|338718816|ref|XP_001915867.2| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Equus caballus]
          Length = 1374

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 177/402 (44%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  L  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNLTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              L+++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LVSI--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 145/310 (46%), Gaps = 46/310 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  L  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNLTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V +LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVTNLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN 308
            L  + L+ N
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 118/247 (47%), Gaps = 2/247 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L + +  L  L  L++  N+ +E+P  + +L  LK   +  N +  I
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IGS   L   D S N ++ +   +  C NL D   S+N +  LPE +     ++ L 
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNLTTLK 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L ++ I     + EL  S N +  +P +IG L+ +       N +  +P  I
Sbjct: 283 IDENQLMYLPDS-IGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               ++   ++ +N L  LP E+G + KL   +L  N+LK       +L +L+ + LS+N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVTNLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 286 SLSGLPP 292
               L P
Sbjct: 402 QSKPLIP 408


>gi|418686455|ref|ZP_13247621.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738888|gb|EKQ83620.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 380

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 144/270 (53%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +D++ L L+ N  + L +++  L  L  LN++ N+L+ LP  IG+L  L+ L++  N   
Sbjct: 46  LDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFT 105

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+     L +    SNQL  LP+ +G+  NL   + ++N   ++P+++     +  
Sbjct: 106 ILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQT 165

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L++  N+LT L N  I     L  L    N L  +P  IG L  L  L L  NR+ ++P+
Sbjct: 166 LNLGYNQLTALPNE-IGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPN 224

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            I    +L   Y+G+N L+ LP E+G+L  L  L+L  N+L     E  +L +L  L L 
Sbjct: 225 EIGQLQNLQSLYLGSNLLTTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLW 284

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            N L  LP EIG++  L++L L+ N L+TL
Sbjct: 285 GNRLKTLPNEIGQLKNLQRLHLSYNQLKTL 314



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 144/301 (47%), Gaps = 15/301 (4%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS    + +P E+ K               +LQ+L L  N +  L +++  L  L  L
Sbjct: 51  LNLSANRFKTLPKEIGK-------------LKNLQELNLNKNQLTILPKEIGQLKNLRKL 97

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+  N+ + LP  + +L  LK L +  N +  +P+EIG    L   + + NQ K +P  +
Sbjct: 98  NLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEI 157

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL       N +T+LP ++     +  L +  N+LT L N  I     L  L  S 
Sbjct: 158 GQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNE-IGQLQNLQSLYLST 216

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L  +P  IG L  L  L L  N + ++P  I    +L +  +  N L  LP E+G+L 
Sbjct: 217 NRLTTLPNEIGQLQNLQSLYLGSNLLTTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLK 276

Query: 254 KLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL TL L  N+LK    E  QL+ L  L LS N L  LP EI ++  L++L L  N L T
Sbjct: 277 KLRTLSLWGNRLKTLPNEIGQLKNLQRLHLSYNQLKTLPNEIEQLQNLQELDLRNNLLTT 336

Query: 313 L 313
           L
Sbjct: 337 L 337



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 145/308 (47%), Gaps = 35/308 (11%)

Query: 14  LNLSNRSLRDVPNEV--YKNFDEAGEGDKWWEAV--------DLQKLILAHNNIEKLKED 63
           LNL+   L  +P E+   KN  +    D  +  +        +L++L L  N +  L  +
Sbjct: 74  LNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNE 133

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  L VL ++HN+   +P  IG+L  L++L++ +N +  +P+EIG    L      S
Sbjct: 134 IGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGS 193

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           NQL  LP+ +G+  NL     S N +T+LP ++     +  L +  N LT L        
Sbjct: 194 NQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTTL-------- 245

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
                           P+ IG L  L +L+L  NR+ ++P  I     L    +  N L 
Sbjct: 246 ----------------PKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLK 289

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRK 302
            LP E+G+L  L  L L  NQLK    E  QL+ L  LDL NN L+ LP  IG++  L+K
Sbjct: 290 TLPNEIGQLKNLQRLHLSYNQLKTLPNEIEQLQNLQELDLRNNLLTTLPKGIGQLKNLQK 349

Query: 303 LLLTGNPL 310
           L L  N L
Sbjct: 350 LDLRNNEL 357



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 149/323 (46%), Gaps = 17/323 (5%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S N+   LP  IG+L  L+ L+++ N +  +P EIG    L K +   NQ   LP 
Sbjct: 50  VLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            + +  NL +    +N +T+LP ++     +  L++  N+   +    I     L  L  
Sbjct: 110 EVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKE-IGQLKNLQTLNL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
             N L  +P  IG L  L  L L  N++ ++P+ I    +L   Y+  N L+ LP E+G+
Sbjct: 169 GYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQ 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN-NSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L +L L SN L     E  QL+       + N L  LP EIG++  LR L L GN L
Sbjct: 229 LQNLQSLYLGSNLLTTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRL 288

Query: 311 RTLRSSLVNGPTPALLKYL-RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           +TL + +        LK L R  L  N+        E L  +        +EL L    L
Sbjct: 289 KTLPNEI------GQLKNLQRLHLSYNQLKTLPNEIEQLQNL--------QELDLRNNLL 334

Query: 370 SAIPSEIWEAGEITKLDLSRNSI 392
           + +P  I +   + KLDL  N +
Sbjct: 335 TTLPKGIGQLKNLQKLDLRNNEL 357



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 151/315 (47%), Gaps = 38/315 (12%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           ++ L++S N    +P EIG    L + + + NQL  LP  +G+  NL      +N  T L
Sbjct: 48  VRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTIL 107

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P+++     + +L +  N+LT L N  I     L  L  + N    +P+ IG L  L  L
Sbjct: 108 PKEVEKLENLKELYLGSNQLTTLPNE-IGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTL 166

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
           +L  N++ ++P+ I    +L   Y+G+N L+ALP E+G+L  L +L L +N+L     E 
Sbjct: 167 NLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEI 226

Query: 273 CQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS 331
            QL+ L  L L +N L+ LP EIG++  L++L L  N L TL   +        LK LR+
Sbjct: 227 GQLQNLQSLYLGSNLLTTLPKEIGQLQNLQQLELDYNRLYTLPKEI------GRLKKLRT 280

Query: 332 RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
                                         LSL G  L  +P+EI +   + +L LS N 
Sbjct: 281 ------------------------------LSLWGNRLKTLPNEIGQLKNLQRLHLSYNQ 310

Query: 392 IQELPPELSSCASLQ 406
           ++ LP E+    +LQ
Sbjct: 311 LKTLPNEIEQLQNLQ 325



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 14/209 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +LNL    L  +PNE+              +  +LQ L L  N +  L  ++  L  L  
Sbjct: 165 TLNLGYNQLTALPNEI-------------GQLKNLQSLYLGSNQLTALPNEIGQLQNLQS 211

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +S N+L+ LP  IG+L  L+SL +  N +  +P EIG    L + +   N+L  LP  
Sbjct: 212 LYLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTTLPKEIGQLQNLQQLELDYNRLYTLPKE 271

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +GR   L       N + +LP ++     + +L +  N+L  L N  I     L EL   
Sbjct: 272 IGRLKKLRTLSLWGNRLKTLPNEIGQLKNLQRLHLSYNQLKTLPNE-IEQLQNLQELDLR 330

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILS 221
            NLL  +P+ IG L  L +LDL  N + S
Sbjct: 331 NNLLTTLPKGIGQLKNLQKLDLRNNELFS 359


>gi|379729933|ref|YP_005322129.1| hypothetical protein SGRA_1810 [Saprospira grandis str. Lewin]
 gi|378575544|gb|AFC24545.1| leucine-rich repeat-containing protein [Saprospira grandis str.
           Lewin]
          Length = 606

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 138/281 (49%), Gaps = 2/281 (0%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           GD   E   L  L L +N +++L + L +LP L  L +S+N+L  LP  I  L  L+ L 
Sbjct: 94  GDSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQLQYLPEKIKGLRNLRRLY 153

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           +  N +  +P+ +     L      +NQL+ +P +LG+   L       N +  LPE L+
Sbjct: 154 IDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLLDKNQLQYLPETLS 213

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
             S +  L ++ N+L  L   LI     LT L A+ N L  +P  IGS   L++L +  N
Sbjct: 214 GASALEVLAIDDNRLKKLPEALIY-LKKLTFLFAAHNELQELPPQIGSSRNLVKLCVEHN 272

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++  +P SI     L    + +N L  LP   G+L  L  L L SNQL    +   +LR 
Sbjct: 273 QLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYLDSNQLTVLPINFGELRA 332

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           L  L LS+N L+ LP  IG    LR+L L  N + +L  S+
Sbjct: 333 LENLYLSDNQLTSLPSGIGNCKELRELFLNNNAMTSLPDSM 373



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 131/267 (49%), Gaps = 4/267 (1%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N ++ L E L     L VL +  N+L +LP A+  L  L  L  + N + ++P +IGS+ 
Sbjct: 203 NQLQYLPETLSGASALEVLAIDDNRLKKLPEALIYLKKLTFLFAAHNELQELPPQIGSSR 262

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            LVK     NQL+ LP S+G+   L   +  +N +  LP++      + KL ++ N+LTV
Sbjct: 263 NLVKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYLDSNQLTV 322

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L  N       L  L  S N L  +P  IG+   L  L L+ N + S+P S+     L E
Sbjct: 323 LPIN-FGELRALENLYLSDNQLTSLPSGIGNCKELRELFLNNNAMTSLPDSMGTLYQLEE 381

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE---ACQLRLSVLDLSNNSLSGLP 291
            YM +N ++ LP+  G L  L  L L +N++     +   +   RLS + L NN+   LP
Sbjct: 382 LYMNDNQIANLPSSFGGLKNLKLLFLTNNKINRLSEDLDCSGWKRLSAIYLENNAFQKLP 441

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLV 318
             +     L+ L L GN +  +  S++
Sbjct: 442 KALETAPQLQTLYLDGNLISEVNDSII 468



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 124/250 (49%), Gaps = 5/250 (2%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L  AHN +++L   + +   L  L V HN+L  LP +IG+L  L+ L +  N + ++P  
Sbjct: 244 LFAAHNELQELPPQIGSSRNLVKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKN 303

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
            G   AL K    SNQL  LP + G    L +   S+N +TSLP  + +C ++ +L +  
Sbjct: 304 FGQLKALRKLYLDSNQLTVLPINFGELRALENLYLSDNQLTSLPSGIGNCKELRELFLNN 363

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI--LSIPSSIS 227
           N +T L +++  +   L EL  + N +  +P + G L  L  L L  N+I  LS     S
Sbjct: 364 NAMTSLPDSM-GTLYQLEELYMNDNQIANLPSSFGGLKNLKLLFLTNNKINRLSEDLDCS 422

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNN 285
           G   L+  Y+ NNA   LP  L    +L TL L  N + E    +     ++  + L++N
Sbjct: 423 GWKRLSAIYLENNAFQKLPKALETAPQLQTLYLDGNLISEVNDSIIIKMPKIEHISLNDN 482

Query: 286 SLSGLPPEIG 295
            LS LP  +G
Sbjct: 483 QLSELPDNMG 492


>gi|291232979|ref|XP_002736431.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 1196

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 179/380 (47%), Gaps = 29/380 (7%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L LA+NNI  +  D+ NL  L VL++ +N+++ +P A+ +L  L  L ++ N +  IP +
Sbjct: 263 LRLANNNISLIPPDIANLSELLVLDLEYNQIANIPPALCDLKQLVELTLNINKLTCIPSD 322

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           I     L     S NQL E+P +L     L+      N ++++P  + +   + KLD+  
Sbjct: 323 IKKLVRLQTLGLSDNQLNEIPPALCDMPKLTKLTLDGNGLSAIPSAIRNLRNLQKLDLSN 382

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N ++V+ + L+     L EL    N L  +P  IG+L +L +LDL  N  +S   S+S  
Sbjct: 383 NNISVIPSELL-HMNQLIELRLGSNQLKCIPSEIGNLQQLEKLDLSHNEGISGADSLSSL 441

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLS 288
             L+E  +  N L ++P  + KL KL  L ++ N +KE   E   L  L  L L  N L+
Sbjct: 442 DELSELKLNKNNLRSVP-NMFKLKKLQVLHMNDNLIKEIPEEIQNLYSLKELWLDYNQLT 500

Query: 289 GLPPEIGKMTTLRKLLLTGNPLRTLRSSL----------------------VNGPTPALL 326
            +P EIG++T LR+L L  N L  +  ++                      VN      +
Sbjct: 501 SIPSEIGELTNLRELSLLMNKLTEITPAIGKLSMLRHLNLEYNKLKTLPEEVNNLIDCDI 560

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           +   + + ++ D E+S  KED   +  R S   +   L G    +IP    +      +D
Sbjct: 561 RLKGNPMSQDLDKESSYHKEDTKVVRIRRSQEYQSHKLPGGYFISIPPRAVQ----NDVD 616

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +    +++L PEL    +++
Sbjct: 617 IKVQVVEDLQPELMDYPTME 636



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 209/439 (47%), Gaps = 48/439 (10%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKL 60
           MD +  +  T   +NL+ RSLR +P  +      +G         +L+K  LA+N +  L
Sbjct: 67  MDILRWSNPTDEEINLNKRSLRKLPTSI------SG-------FPNLRKCKLANNYLTFL 113

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
             +L  L  L  + +  NK  ++P  I +LH L  L+++ N +  I   I +   L K +
Sbjct: 114 PTELSELKRLKKIELQSNKFDQMPVPIFKLHKLHKLNMADNHLTSINQSITNLKQLRKLN 173

Query: 121 CSSNQL----------------------KELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
            S N+L                      + LP+S+G   +L+      N +T+LP D+  
Sbjct: 174 LSGNKLINIDYITTLLKLEELHLSNNEIQSLPASIGDMSDLTVLYLDKNNLTTLPSDIKK 233

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
             ++ ++DV  N++ +    L      +T L  + N ++ +P  I +LS L+ LDL  N+
Sbjct: 234 LHQLERIDVSSNQIEIFPPGL-CELNEVTSLRLANNNISLIPPDIANLSELLVLDLEYNQ 292

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           I +IP ++     L E  +  N L+ +P+++ KL +L TL L  NQL E     C + +L
Sbjct: 293 IANIPPALCDLKQLVELTLNINKLTCIPSDIKKLVRLQTLGLSDNQLNEIPPALCDMPKL 352

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL---P 334
           + L L  N LS +P  I  +  L+KL L+ N +  + S L++      L+   ++L   P
Sbjct: 353 TKLTLDGNGLSAIPSAIRNLRNLQKLDLSNNNISVIPSELLHMNQLIELRLGSNQLKCIP 412

Query: 335 ENEDSEASTTKEDL-----ITMATRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDL 387
               +     K DL     I+ A  LS   +  EL L   NL ++P+ +++  ++  L +
Sbjct: 413 SEIGNLQQLEKLDLSHNEGISGADSLSSLDELSELKLNKNNLRSVPN-MFKLKKLQVLHM 471

Query: 388 SRNSIQELPPELSSCASLQ 406
           + N I+E+P E+ +  SL+
Sbjct: 472 NDNLIKEIPEEIQNLYSLK 490



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 182/372 (48%), Gaps = 19/372 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L++N I+ L   + ++  LTVL +  N L+ LP+ I +LH L+ +DVS N I   
Sbjct: 191 LEELHLSNNEIQSLPASIGDMSDLTVLYLDKNNLTTLPSDIKKLHQLERIDVSSNQIEIF 250

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +     +     ++N +  +P  +     L       N I ++P  L D  ++ +L 
Sbjct: 251 PPGLCELNEVTSLRLANNNISLIPPDIANLSELLVLDLEYNQIANIPPALCDLKQLVELT 310

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NKLT + ++ I     L  L  S N LN +P  +  + +L +L L  N + +IPS+I
Sbjct: 311 LNINKLTCIPSD-IKKLVRLQTLGLSDNQLNEIPPALCDMPKLTKLTLDGNGLSAIPSAI 369

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               +L +  + NN +S +P+EL  +++L  L L SNQLK    E   L +L  LDLS+N
Sbjct: 370 RNLRNLQKLDLSNNNISVIPSELLHMNQLIELRLGSNQLKCIPSEIGNLQQLEKLDLSHN 429

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
                   +  +  L +L L  N LR++         P + K  + ++    D+      
Sbjct: 430 EGISGADSLSSLDELSELKLNKNNLRSV---------PNMFKLKKLQVLHMNDNLIKEIP 480

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP---ELSSC 402
           E++  +      + KEL L+   L++IPSEI E   + +L L  N + E+ P   +LS  
Sbjct: 481 EEIQNL-----YSLKELWLDYNQLTSIPSEIGELTNLRELSLLMNKLTEITPAIGKLSML 535

Query: 403 ASLQVKFSDLVT 414
             L ++++ L T
Sbjct: 536 RHLNLEYNKLKT 547



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 109/243 (44%), Gaps = 19/243 (7%)

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
           I+ +  L +   + N L  +P  +  L RL +++L  N+   +P  I     L +  M +
Sbjct: 94  ISGFPNLRKCKLANNYLTFLPTELSELKRLKKIELQSNKFDQMPVPIFKLHKLHKLNMAD 153

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTT 299
           N L+++   +  L +L  L+L  N+L         L+L  L LSNN +  LP  IG M+ 
Sbjct: 154 NHLTSINQSITNLKQLRKLNLSGNKLINIDYITTLLKLEELHLSNNEIQSLPASIGDMSD 213

Query: 300 LRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT--MATRLSV 357
           L  L L  N L TL S +              +L + E  + S+ + ++    +     V
Sbjct: 214 LTVLYLDKNNLTTLPSDI-------------KKLHQLERIDVSSNQIEIFPPGLCELNEV 260

Query: 358 TSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKE 417
           TS  L L   N+S IP +I    E+  LDL  N I  +PP L  C   Q+    L  NK 
Sbjct: 261 TS--LRLANNNISLIPPDIANLSELLVLDLEYNQIANIPPAL--CDLKQLVELTLNINKL 316

Query: 418 SCI 420
           +CI
Sbjct: 317 TCI 319



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 14/125 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L+  +LR VPN               ++   LQ L +  N I+++ E+++NL  L  L
Sbjct: 447 LKLNKNNLRSVPN--------------MFKLKKLQVLHMNDNLIKEIPEEIQNLYSLKEL 492

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            + +N+L+ +P+ IGEL  L+ L +  N + +I   IG  + L   +   N+LK LP  +
Sbjct: 493 WLDYNQLTSIPSEIGELTNLRELSLLMNKLTEITPAIGKLSMLRHLNLEYNKLKTLPEEV 552

Query: 134 GRCLN 138
              ++
Sbjct: 553 NNLID 557


>gi|301764090|ref|XP_002917472.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and IQ
           domain-containing protein 4-like [Ailuropoda
           melanoleuca]
          Length = 560

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 165/353 (46%), Gaps = 20/353 (5%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N+++ L +++ N   L  + +  N+    P  +  L+ L+ +D+  N +  +P+EIG+ T
Sbjct: 152 NDLKSLPKEIENQTKLREIYLKQNQFEVFPPELCVLYDLEVIDLDKNRLTAVPEEIGNLT 211

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L KF  + N L  LP SLGRC   S    S N + S+P  LA+ + M+++ + GN L  
Sbjct: 212 RLQKFYVAHNSLPVLPESLGRCSRXSVLDLSYNRLHSIPHTLAELTGMTEIGLSGNPLEK 271

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           +   LI  WT +  L      L G+  +   L  L  LDL QN +   PS +S    L  
Sbjct: 272 VP-RLICRWTSVHLLYLCNTGLRGLRRSFRRLGNLRFLDLSQNHLERCPSEVSALKHLEI 330

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGL 290
             + +N +  LP++ G LSKL  L L  NQ   +  E   L    +L +        + L
Sbjct: 331 LALDDNKIWQLPSDFGSLSKLKMLGLTGNQFLSFPEEILPLESLEKLYIGQDQGAKFTSL 390

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P  I K+ +L++L +  N L  L +SL + P   +L    +RL +  DS         I 
Sbjct: 391 PEHISKLQSLKELYIENNHLEYLPTSLGSMPNLEILDCRHNRLKQLPDS---------IC 441

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            A  L    KEL LE   ++ +P  +     +  L L  N +++ P E+  CA
Sbjct: 442 QAQAL----KELLLEDNLITCLPENLDSLVNLKVLTLVDNPLEDPPREV--CA 488



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 129/292 (44%), Gaps = 28/292 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           DL+ + L  N +  + E++ NL  L    V+HN L  LP ++G       LD+S+N +  
Sbjct: 189 DLEVIDLDKNRLTAVPEEIGNLTRLQKFYVAHNSLPVLPESLGRCSRXSVLDLSYNRLHS 248

Query: 106 IPDEIGSATALVKFDCSSNQLKELP-----------------------SSLGRCLNLSDF 142
           IP  +   T + +   S N L+++P                        S  R  NL   
Sbjct: 249 IPHTLAELTGMTEIGLSGNPLEKVPRLICRWTSVHLLYLCNTGLRGLRRSFRRLGNLRFL 308

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
             S N +   P +++    +  L ++ NK+  L ++   S + L  L  + N     PE 
Sbjct: 309 DLSQNHLERCPSEVSALKHLEILALDDNKIWQLPSDF-GSLSKLKMLGLTGNQFLSFPEE 367

Query: 203 IGSLSRLIRLDLHQN---RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
           I  L  L +L + Q+   +  S+P  IS   SL E Y+ NN L  LP  LG +  L  LD
Sbjct: 368 ILPLESLEKLYIGQDQGAKFTSLPEHISKLQSLKELYIENNHLEYLPTSLGSMPNLEILD 427

Query: 260 LHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
              N+LK+     CQ + L  L L +N ++ LP  +  +  L+ L L  NPL
Sbjct: 428 CRHNRLKQLPDSICQAQALKELLLEDNLITCLPENLDSLVNLKVLTLVDNPL 479



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 152/332 (45%), Gaps = 13/332 (3%)

Query: 77  HNKLSELPAAIGELHMLKSLDV-SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR 135
           H  L+E+P  + +L     L   S N +  +P EI + T L +     NQ +  P  L  
Sbjct: 127 HTGLAEIPVGLCKLLHHLELLGLSGNDLKSLPKEIENQTKLREIYLKQNQFEVFPPELCV 186

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             +L       N +T++PE++ + +++ K  V  N L VL  +L    +  + L  S N 
Sbjct: 187 LYDLEVIDLDKNRLTAVPEEIGNLTRLQKFYVAHNSLPVLPESL-GRCSRXSVLDLSYNR 245

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L+ +P T+  L+ +  + L  N +  +P  I    S+   Y+ N  L  L     +L  L
Sbjct: 246 LHSIPHTLAELTGMTEIGLSGNPLEKVPRLICRWTSVHLLYLCNTGLRGLRRSFRRLGNL 305

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LDL  N L+    E   L+ L +L L +N +  LP + G ++ L+ L LTGN   +  
Sbjct: 306 RFLDLSQNHLERCPSEVSALKHLEILALDDNKIWQLPSDFGSLSKLKMLGLTGNQFLSFP 365

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             ++  P  +L K     + +++ ++ ++  E +  +      + KEL +E  +L  +P+
Sbjct: 366 EEIL--PLESLEKLY---IGQDQGAKFTSLPEHISKLQ-----SLKELYIENNHLEYLPT 415

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +     +  LD   N +++LP  +    +L+
Sbjct: 416 SLGSMPNLEILDCRHNRLKQLPDSICQAQALK 447



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 114/280 (40%), Gaps = 52/280 (18%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQK  +AHN++  L E L      +VL++S+N+L  +P  + EL  +  + +S N + K+
Sbjct: 213 LQKFYVAHNSLPVLPESLGRCSRXSVLDLSYNRLHSIPHTLAELTGMTEIGLSGNPLEKV 272

Query: 107 PDEIGSATAL----------------------VKF-DCSSNQLKELPSSLGRCLNLSDFK 143
           P  I   T++                      ++F D S N L+  PS +    +L    
Sbjct: 273 PRLICRWTSVHLLYLCNTGLRGLRRSFRRLGNLRFLDLSQNHLERCPSEVSALKHLEILA 332

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL------------------------ 179
             +N I  LP D    SK+  L + GN+       +                        
Sbjct: 333 LDDNKIWQLPSDFGSLSKLKMLGLTGNQFLSFPEEILPLESLEKLYIGQDQGAKFTSLPE 392

Query: 180 -IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I+    L EL    N L  +P ++GS+  L  LD   NR+  +P SI    +L E  + 
Sbjct: 393 HISKLQSLKELYIENNHLEYLPTSLGSMPNLEILDCRHNRLKQLPDSICQAQALKELLLE 452

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQL----KEYCVEACQ 274
           +N ++ LP  L  L  L  L L  N L    +E C E  Q
Sbjct: 453 DNLITCLPENLDSLVNLKVLTLVDNPLEDPPREVCAEGIQ 492



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 148/356 (41%), Gaps = 63/356 (17%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK--IPDEIGS 112
           N IE +   ++ L  + +L ++ NKL  L   +G L  L+ LD+S N +++  +P   G 
Sbjct: 58  NRIEAIPRGIQRLKNVRILYLNENKLRALCPELGRLSSLEGLDLSHNPLLRSSLPVLGGL 117

Query: 113 ATALVKFDCSSNQLKELP-SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNK 171
                     +  L E+P        +L     S N + SLP+++ + +K+ ++ ++ N+
Sbjct: 118 RRLRELRLYHTG-LAEIPVGLCKLLHHLELLGLSGNDLKSLPKEIENQTKLREIYLKQNQ 176

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
             V                         P  +  L  L  +DL +NR+ ++P  I     
Sbjct: 177 FEVF------------------------PPELCVLYDLEVIDLDKNRLTAVPEEIGNLTR 212

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLP 291
           L +FY+ +N+L  LP  LG+ S                      R SVLDLS N L  +P
Sbjct: 213 LQKFYVAHNSLPVLPESLGRCS----------------------RXSVLDLSYNRLHSIP 250

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITM 351
             + ++T + ++ L+GNPL  +   L+   T   L YL            +T    L   
Sbjct: 251 HTLAELTGMTEIGLSGNPLEKV-PRLICRWTSVHLLYL-----------CNTGLRGLRRS 298

Query: 352 ATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             RL    + L L   +L   PSE+     +  L L  N I +LP +  S + L++
Sbjct: 299 FRRLG-NLRFLDLSQNHLERCPSEVSALKHLEILALDDNKIWQLPSDFGSLSKLKM 353



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 133/338 (39%), Gaps = 63/338 (18%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           +D S  S+  IP +I     L +    +N+++ +P  + R  N+     + N + +L  +
Sbjct: 30  IDASNQSLTTIPSQILELEELEEAHLENNRIEAIPRGIQRLKNVRILYLNENKLRALCPE 89

Query: 156 LADCSKMSKLDVEGNKL----------TVLSNNLIASWTMLTEL--------------IA 191
           L   S +  LD+  N L                L    T L E+                
Sbjct: 90  LGRLSSLEGLDLSHNPLLRSSLPVLGGLRRLRELRLYHTGLAEIPVGLCKLLHHLELLGL 149

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N L  +P+ I + ++L  + L QN+    P  +     L    +  N L+A+P E+G 
Sbjct: 150 SGNDLKSLPKEIENQTKLREIYLKQNQFEVFPPELCVLYDLEVIDLDKNRLTAVPEEIGN 209

Query: 252 LSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           L++L    +  N L      +  C  R SVLDLS N L  +P  + ++T + ++ L+GNP
Sbjct: 210 LTRLQKFYVAHNSLPVLPESLGRCS-RXSVLDLSYNRLHSIPHTLAELTGMTEIGLSGNP 268

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNL 369
           L                     ++P             LI   T + +    L L    L
Sbjct: 269 L--------------------EKVPR------------LICRWTSVHL----LYLCNTGL 292

Query: 370 SAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             +       G +  LDLS+N ++  P E+S+   L++
Sbjct: 293 RGLRRSFRRLGNLRFLDLSQNHLERCPSEVSALKHLEI 330



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 49/221 (22%)

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           SR   +D     + +IPS I     L E ++ NN + A+P  + +L  +  L L+ N+L+
Sbjct: 25  SRTFFIDASNQSLTTIPSQILELEELEEAHLENNRIEAIPRGIQRLKNVRILYLNENKLR 84

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
             C                      PE+G++++L  L L+ NPL                
Sbjct: 85  ALC----------------------PELGRLSSLEGLDLSHNPL---------------- 106

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSV-------TSKELSLEGMNLSAIPSEIWEA 379
             LRS LP               T    + V         + L L G +L ++P EI   
Sbjct: 107 --LRSSLPVLGGLRRLRELRLYHTGLAEIPVGLCKLLHHLELLGLSGNDLKSLPKEIENQ 164

Query: 380 GEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCI 420
            ++ ++ L +N  +  PPEL  C    ++  DL  N+ + +
Sbjct: 165 TKLREIYLKQNQFEVFPPEL--CVLYDLEVIDLDKNRLTAV 203


>gi|410987956|ref|XP_004001475.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Felis
           catus]
          Length = 1223

 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 156/328 (47%), Gaps = 48/328 (14%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           + ++  ++L+KL L+ N I++L  ++ N   L  L+VS N + E+P +I     L+  D 
Sbjct: 2   EPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADF 61

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S N + ++P+      +L     +   L+ LP  +G   NL   +   N + SLP  L+ 
Sbjct: 62  SGNPLSRLPEGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSF 121

Query: 159 CSKMSKLDVEGNKLTVLSNNLIA--------------------------------SWTML 186
             K+ +LD+ GN+L VL + L A                                S   L
Sbjct: 122 LVKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENRL 181

Query: 187 TELIA-------------SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            EL +             S+NLL  +P+ IG L +L  L + QNR+  +  +I  C +L+
Sbjct: 182 EELPSELGGLLLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS 241

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLP 291
           E  +  N L+ALP  LGKL+KL  L+   N+L+    E   C + LSVL L +N L+ LP
Sbjct: 242 ELILTENLLTALPRSLGKLTKLTNLNADRNRLEVLPPEIGGC-VALSVLSLRDNRLAALP 300

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           PE+     L  L + GN LR+L  +L +
Sbjct: 301 PELAHTAELHVLDVAGNRLRSLPFALTH 328



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 130/241 (53%), Gaps = 1/241 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L  L L  N ++ L   L  L  L  L++  N+L  LP  +G L  L+ L +  N + 
Sbjct: 100 ANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQLS 159

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P E+G+   LV  D S N+L+ELPS LG  L L+D   S N +  LP+ +    ++S 
Sbjct: 160 TLPPELGNLRRLVCLDVSENRLEELPSELGGLLLLTDLLLSQNLLQRLPDGIGQLKQLSI 219

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+L  ++   I     L+ELI ++NLL  +P ++G L++L  L+  +NR+  +P 
Sbjct: 220 LKVDQNRLCEVTEA-IGDCENLSELILTENLLTALPRSLGKLTKLTNLNADRNRLEVLPP 278

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ALP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 279 EIGGCVALSVLSLRDNRLAALPPELAHTAELHVLDVAGNRLRSLPFALTHLNLKALWLAE 338

Query: 285 N 285
           N
Sbjct: 339 N 339



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 151/318 (47%), Gaps = 42/318 (13%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDFKASNNCIT 150
           L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C  L ++DF  S N ++
Sbjct: 10  LRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADF--SGNPLS 67

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
            LPE       ++ L +    L  L  + + +   L  L   +NLL  +P ++  L +L 
Sbjct: 68  RLPEGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENLLKSLPASLSFLVKLE 126

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           +LDL  N +  +P ++    +L E ++  N LS LP ELG L +L  LD+  N+L+E   
Sbjct: 127 QLDLGGNELEVLPDTLGALPNLRELWLDRNQLSTLPPELGNLRRLVCLDVSENRLEELPS 186

Query: 271 EACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E   L L    L S N L  LP  IG++  L                       ++LK  
Sbjct: 187 ELGGLLLLTDLLLSQNLLQRLPDGIGQLKQL-----------------------SILKVD 223

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           ++RL   E +EA    E+L            EL L    L+A+P  + +  ++T L+  R
Sbjct: 224 QNRL--CEVTEAIGDCENL-----------SELILTENLLTALPRSLGKLTKLTNLNADR 270

Query: 390 NSIQELPPELSSCASLQV 407
           N ++ LPPE+  C +L V
Sbjct: 271 NRLEVLPPEIGGCVALSV 288


>gi|4239895|dbj|BAA74737.1| MASL1 [Homo sapiens]
          Length = 1052

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 143/295 (48%), Gaps = 28/295 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSI 103
           D++ L L +N +E++ E L + L  L VL +  N+ + LP A+ EL H L  LDVS N +
Sbjct: 64  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 104 MKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
             +  E+ SA   L K + S NQL  LP+ LG   +L +   S N +  LP+ L+  S++
Sbjct: 124 TALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRL 183

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    + ++
Sbjct: 184 RTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------- 275
           P+      SL    + NN L ALPA+   L +L  L+L SN  +E+      L       
Sbjct: 243 PAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELY 302

Query: 276 -----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                            RL  L L NN +  LP  I ++T L +L+L GN +  L
Sbjct: 303 LSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVL 357



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/280 (33%), Positives = 130/280 (46%), Gaps = 28/280 (10%)

Query: 66  NLPLLTVLNVSHNKLSE------------------------LPAAIGEL-HMLKSLDVSF 100
           NL  +  LN+ +N L E                        LP A+ EL H L  LDVS 
Sbjct: 61  NLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 120

Query: 101 NSIMKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           N +  +  E+ SA   L K + S NQL  LP+ LG   +L +   S N +  LP+ L+  
Sbjct: 121 NRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCL 180

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           S++  LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    +
Sbjct: 181 SRLRTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALRALKILWLSGAEL 239

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
            ++P+      SL    + NN L ALPA+   L +L  L+L SN  +E+      L  L 
Sbjct: 240 GTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLE 299

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L LS N L+ +P  I  +  L  L L  N +R L  S+V
Sbjct: 300 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIV 339



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 7/269 (2%)

Query: 46  DLQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            L +L ++HN +  L  E +  L  L  LN+SHN+L  LPA +G L  L+ LDVSFN + 
Sbjct: 112 HLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 171

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PD +   + L   D   NQL   P  L + + L +   S+N +  LPED++    +  
Sbjct: 172 HLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKI 231

Query: 165 LDVEGNKLTVLSNNL--IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           L + G +L  L      +AS   L  L+   N L  +P     L RL  L+L  N     
Sbjct: 232 LWLSGAELGTLPAGFCELAS---LESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEF 288

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P+++     L E Y+  N L+++P+ +  L +L TL L +N+++       +L  L  L 
Sbjct: 289 PAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELV 348

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  N ++ LP   G+++ +    +  NPL
Sbjct: 349 LQGNQIAVLPDHFGQLSRVGLWKIKDNPL 377



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 127/285 (44%), Gaps = 25/285 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL L+HN +  L   L  L  L  L+VS N+L+ LP ++  L  L++LDV  N +  
Sbjct: 136 ELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTA 195

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P ++    AL + D SSN+L+ LP  +     L     S   + +LP    + + +  L
Sbjct: 196 FPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESL 255

Query: 166 DVEGNKLTV---------------LSNNLIASWTM-------LTELIASKNLLNGMPETI 203
            ++ N L                 LS+NL   +         L EL  S+N L  +P  I
Sbjct: 256 MLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLI 315

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
             L RL+ L L  NRI  +P SI     L E  +  N ++ LP   G+LS++G   +  N
Sbjct: 316 SGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDN 375

Query: 264 QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            L +   E C   +  +      L+   P +       KLLL G+
Sbjct: 376 PLIQPPYEVCMKGIPYIAAYQKELAHSQPAVQPRL---KLLLMGH 417



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 140/310 (45%), Gaps = 51/310 (16%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPEDLADCSK-MS 163
           +P  +G   AL   +  +N L+E+P  LG  L +L       N    LP  +A+    ++
Sbjct: 58  LPANLGDIEAL---NLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLT 114

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +LDV  N+LT L   ++++   L +L  S N L  +P  +G+L+ L  LD+  NR+  +P
Sbjct: 115 ELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLP 174

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
            S+S  C                     LS+L TLD+  NQL  +  +  QL  L  LD+
Sbjct: 175 DSLS--C---------------------LSRLRTLDVDHNQLTAFPRQLLQLVALEELDV 211

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           S+N L GLP +I  +  L+ L L+G  L TL +          L  L S + +N   +A 
Sbjct: 212 SSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCE------LASLESLMLDNNGLQAL 265

Query: 343 TTKEDLITMATRLSVTS----------------KELSLEGMNLSAIPSEIWEAGEITKLD 386
             +   +     L+++S                +EL L    L+++PS I   G +  L 
Sbjct: 266 PAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLW 325

Query: 387 LSRNSIQELP 396
           L  N I+ LP
Sbjct: 326 LDNNRIRYLP 335



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 1/182 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L ++ N +  L ED+  L  L +L +S  +L  LPA   EL  L+SL +  N + 
Sbjct: 204 VALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQ 263

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P +      L   + SSN  +E P++L     L +   S N +TS+P  ++   ++  
Sbjct: 264 ALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLT 323

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L ++ N++  L ++++   T L EL+   N +  +P+  G LSR+    +  N ++  P 
Sbjct: 324 LWLDNNRIRYLPDSIV-ELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPY 382

Query: 225 SI 226
            +
Sbjct: 383 EV 384



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 21/177 (11%)

Query: 237 MGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 293
           +GNN L  +P  LG  L  L  L L  N+         +L   L+ LD+S+N L+ L  E
Sbjct: 70  LGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAE 129

Query: 294 I-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           +   +  LRKL L+ N L  L + L        L +L          E   +   L  + 
Sbjct: 130 VVSALRELRKLNLSHNQLPALPAQL------GALAHL---------EELDVSFNRLAHLP 174

Query: 353 TRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             LS  S+   L ++   L+A P ++ +   + +LD+S N ++ LP ++S+  +L++
Sbjct: 175 DSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKI 231


>gi|313229869|emb|CBY07574.1| unnamed protein product [Oikopleura dioica]
          Length = 622

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 215/454 (47%), Gaps = 62/454 (13%)

Query: 3   RILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAV-----------DLQKLI 51
           ++ +  R    LN+S  SL+ +P  VY         D    ++            ++ L 
Sbjct: 138 KVGQIGRQLKILNVSGNSLKKLPKSVYVLRGAVNASDNKISSLPGVTSTKKTKPTIEALF 197

Query: 52  LAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIG 111
           LA+N+IE++ E    L  L  L++++NK++ LP+ IG ++ L SLD+  N + ++P++ G
Sbjct: 198 LANNDIEEIPESFSKLMYLLQLDLANNKVASLPSTIGNINYLTSLDLRNNEVFELPEDFG 257

Query: 112 S-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGN 170
               +L   + S N+L+ LP+SLG   ++ +   SNN I ++PE +  C ++ K D+  N
Sbjct: 258 RLKFSLQYLNLSGNKLESLPNSLGTLSHIEELNLSNNQIATIPETIFGCKRLIKFDISQN 317

Query: 171 --------------KLTVLSNNLIASWTML------------TELIASKNL--------- 195
                         ++  LS+N IA    L             EL + +NL         
Sbjct: 318 LLISCDNLSGLASLEIANLSSNRIAEIAELKLDSIAQIDLSKNELSSCENLEDLKLSGCG 377

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSS-ISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  + E I  L  L  +D  +N I  I ++ I+    L    +  N LS+LP  +  +  
Sbjct: 378 LESLDEFISKLIFLQHIDFSENNISEISTTLINRWRYLRTANLSKNQLSSLPKGIRNMQH 437

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           LG LDL  N+  E+      LR L+ L L+NN +   P   G++ +LR + L+ N +  L
Sbjct: 438 LGKLDLSFNKFTEFDENFKILRALTELKLNNNLIQTCPKNFGELKSLRFVDLSHNEIEEL 497

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
            S  ++  T + L +L++      +++ +   ++L  +  RL    +E+ L    +  +P
Sbjct: 498 PSEQLD--TISSLHFLKA-----TNNKITVFPDNLQHL--RL----QEIDLSDNEIKELP 544

Query: 374 SEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           + I     + K++L  NS++ +P ++   ASL+V
Sbjct: 545 TAIRNMKTVRKMNLQNNSLELIPDQIEKMASLRV 578



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 143/358 (39%), Gaps = 84/358 (23%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPL-LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L  L L +N + +L ED   L   L  LN+S NKL  LP ++G L  ++ L++S N I  
Sbjct: 239 LTSLDLRNNEVFELPEDFGRLKFSLQYLNLSGNKLESLPNSLGTLSHIEELNLSNNQIAT 298

Query: 106 IPDEIGSATALVKFDCS----------------------SNQLKELP------------- 130
           IP+ I     L+KFD S                      SN++ E+              
Sbjct: 299 IPETIFGCKRLIKFDISQNLLISCDNLSGLASLEIANLSSNRIAEIAELKLDSIAQIDLS 358

Query: 131 -SSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
            + L  C NL D K S   + SL E ++    +  +D   N ++ +S  LI  W  L   
Sbjct: 359 KNELSSCENLEDLKLSGCGLESLDEFISKLIFLQHIDFSENNISEISTTLINRWRYLRTA 418

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             SKN L+ +P+ I ++  L +LDL  N+      +     +L E  + NN +   P   
Sbjct: 419 NLSKNQLSSLPKGIRNMQHLGKLDLSFNKFTEFDENFKILRALTELKLNNNLIQTCPKNF 478

Query: 250 GKLSKLGTLDLHSNQLKEYCVEAC------------------------QLRLSVLDLS-- 283
           G+L  L  +DL  N+++E   E                           LRL  +DLS  
Sbjct: 479 GELKSLRFVDLSHNEIEELPSEQLDTISSLHFLKATNNKITVFPDNLQHLRLQEIDLSDN 538

Query: 284 ---------------------NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNG 320
                                NNSL  +P +I KM +LR L + GN LR       +G
Sbjct: 539 EIKELPTAIRNMKTVRKMNLQNNSLELIPDQIEKMASLRVLNIEGNFLRFYPKCFASG 596



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 156/338 (46%), Gaps = 59/338 (17%)

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           FN I K+P+ IG  + L   +   N +K++P S+G+  NLS F  S N I S+P  ++  
Sbjct: 60  FNVIKKVPNGIGKISRLRNLELQGNDIKKIPKSVGKLKNLSKFDMSKNKIKSVPRSISKA 119

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR-------- 211
           +K+  +++  N L  L   +      L  L  S N L  +P+++  L   +         
Sbjct: 120 NKLETVNLNNNDLRKLPPKVGQIGRQLKILNVSGNSLKKLPKSVYVLRGAVNASDNKISS 179

Query: 212 ----------------LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
                           L L  N I  IP S S    L +  + NN +++LP+ +G ++ L
Sbjct: 180 LPGVTSTKKTKPTIEALFLANNDIEEIPESFSKLMYLLQLDLANNKVASLPSTIGNINYL 239

Query: 256 GTLDLHSNQLKEYCVEACQLRLSV--LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            +LDL +N++ E   +  +L+ S+  L+LS N L  LP  +G ++ + +L L+ N + T+
Sbjct: 240 TSLDLRNNEVFELPEDFGRLKFSLQYLNLSGNKLESLPNSLGTLSHIEELNLSNNQIATI 299

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIP 373
             ++       L+K+                 ++L+     LS  +   SLE  NLS+  
Sbjct: 300 PETIFG--CKRLIKF--------------DISQNLLISCDNLSGLA---SLEIANLSS-- 338

Query: 374 SEIWEAGE-----ITKLDLSRNSIQELPPELSSCASLQ 406
           + I E  E     I ++DLS+N       ELSSC +L+
Sbjct: 339 NRIAEIAELKLDSIAQIDLSKN-------ELSSCENLE 369



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 183/418 (43%), Gaps = 61/418 (14%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSIM 104
           +L K  ++ N I+ +   +     L  +N+++N L +LP  +G++   LK L+VS NS+ 
Sbjct: 98  NLSKFDMSKNKIKSVPRSISKANKLETVNLNNNDLRKLPPKVGQIGRQLKILNVSGNSLK 157

Query: 105 KIPDEI----GSATA--------------------LVKFDCSSNQLKELPSSLGRCLNLS 140
           K+P  +    G+  A                    +     ++N ++E+P S  + + L 
Sbjct: 158 KLPKSVYVLRGAVNASDNKISSLPGVTSTKKTKPTIEALFLANNDIEEIPESFSKLMYLL 217

Query: 141 DFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMP 200
               +NN + SLP  + + + ++ LD+  N++  L  +       L  L  S N L  +P
Sbjct: 218 QLDLANNKVASLPSTIGNINYLTSLDLRNNEVFELPEDFGRLKFSLQYLNLSGNKLESLP 277

Query: 201 ETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
            ++G+LS +  L+L  N+I +IP +I GC  L +F +  N L +    L  L+ L   +L
Sbjct: 278 NSLGTLSHIEELNLSNNQIATIPETIFGCKRLIKFDISQNLLISC-DNLSGLASLEIANL 336

Query: 261 HSNQLKEYCVEACQLRL---SVLDLSNNSLS----------------GLPPEIGKMTTLR 301
            SN++     E  +L+L   + +DLS N LS                 L   I K+  L+
Sbjct: 337 SSNRI----AEIAELKLDSIAQIDLSKNELSSCENLEDLKLSGCGLESLDEFISKLIFLQ 392

Query: 302 KLLLTGNPLRTLRSSLVNG----PTPALLKYLRSRLPENEDSEASTTKEDL-ITMATRLS 356
            +  + N +  + ++L+N      T  L K   S LP+   +     K DL     T   
Sbjct: 393 HIDFSENNISEISTTLINRWRYLRTANLSKNQLSSLPKGIRNMQHLGKLDLSFNKFTEFD 452

Query: 357 VTSK------ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE-LSSCASLQV 407
              K      EL L    +   P    E   +  +DLS N I+ELP E L + +SL  
Sbjct: 453 ENFKILRALTELKLNNNLIQTCPKNFGELKSLRFVDLSHNEIEELPSEQLDTISSLHF 510



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 112/224 (50%), Gaps = 2/224 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA-IGELHMLKSLDVSFNSIM 104
           +L+ L L+   +E L E +  L  L  ++ S N +SE+    I     L++ ++S N + 
Sbjct: 367 NLEDLKLSGCGLESLDEFISKLIFLQHIDFSENNISEISTTLINRWRYLRTANLSKNQLS 426

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  I +   L K D S N+  E   +      L++ K +NN I + P++  +   +  
Sbjct: 427 SLPKGIRNMQHLGKLDLSFNKFTEFDENFKILRALTELKLNNNLIQTCPKNFGELKSLRF 486

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           +D+  N++  L +  + + + L  L A+ N +   P+ +  L RL  +DL  N I  +P+
Sbjct: 487 VDLSHNEIEELPSEQLDTISSLHFLKATNNKITVFPDNLQHL-RLQEIDLSDNEIKELPT 545

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           +I    ++ +  + NN+L  +P ++ K++ L  L++  N L+ Y
Sbjct: 546 AIRNMKTVRKMNLQNNSLELIPDQIEKMASLRVLNIEGNFLRFY 589



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 6/114 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L   +N I    ++L++L L  + ++S N++ ELP AI  +  ++ +++  NS+  I
Sbjct: 508 LHFLKATNNKITVFPDNLQHLRLQEI-DLSDNEIKELPTAIRNMKTVRKMNLQNNSLELI 566

Query: 107 PDEIGSATALVKFDCSSNQLKELP----SSLGRCLNLSDFKASN-NCITSLPED 155
           PD+I    +L   +   N L+  P    S + +C  L + + S    I  LPED
Sbjct: 567 PDQIEKMASLRVLNIEGNFLRFYPKCFASGMSKCEILKENQRSKRKPIADLPED 620


>gi|119585970|gb|EAW65566.1| malignant fibrous histiocytoma amplified sequence 1 [Homo sapiens]
          Length = 1052

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 143/295 (48%), Gaps = 28/295 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSI 103
           D++ L L +N +E++ E L + L  L VL +  N+ + LP A+ EL H L  LDVS N +
Sbjct: 64  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 104 MKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
             +  E+ SA   L K + S NQL  LP+ LG   +L +   S N +  LP+ L+  S++
Sbjct: 124 TALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRL 183

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    + ++
Sbjct: 184 RTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------- 275
           P+      SL    + NN L ALPA+   L +L  L+L SN  +E+      L       
Sbjct: 243 PAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELY 302

Query: 276 -----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                            RL  L L NN +  LP  I ++T L +L+L GN +  L
Sbjct: 303 LSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVL 357



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/280 (33%), Positives = 130/280 (46%), Gaps = 28/280 (10%)

Query: 66  NLPLLTVLNVSHNKLSE------------------------LPAAIGEL-HMLKSLDVSF 100
           NL  +  LN+ +N L E                        LP A+ EL H L  LDVS 
Sbjct: 61  NLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSH 120

Query: 101 NSIMKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
           N +  +  E+ SA   L K + S NQL  LP+ LG   +L +   S N +  LP+ L+  
Sbjct: 121 NRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCL 180

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
           S++  LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    +
Sbjct: 181 SRLRTLDVDHNQLTAFPRQLL-QLVALEELDVSSNRLRGLPEDISALRALKILWLSGAEL 239

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LS 278
            ++P+      SL    + NN L ALPA+   L +L  L+L SN  +E+      L  L 
Sbjct: 240 GTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLE 299

Query: 279 VLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L LS N L+ +P  I  +  L  L L  N +R L  S+V
Sbjct: 300 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIV 339



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 7/269 (2%)

Query: 46  DLQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            L +L ++HN +  L  E +  L  L  LN+SHN+L  LPA +G L  L+ LDVSFN + 
Sbjct: 112 HLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 171

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PD +   + L   D   NQL   P  L + + L +   S+N +  LPED++    +  
Sbjct: 172 HLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKI 231

Query: 165 LDVEGNKLTVLSNNL--IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           L + G +L  L      +AS   L  L+   N L  +P     L RL  L+L  N     
Sbjct: 232 LWLSGAELGTLPAGFCELAS---LESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEF 288

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLD 281
           P+++     L E Y+  N L+++P+ +  L +L TL L +N+++       +L  L  L 
Sbjct: 289 PAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELV 348

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  N ++ LP   G+++ +    +  NPL
Sbjct: 349 LQGNQIAVLPDHFGQLSRVGLWKIKDNPL 377



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 127/285 (44%), Gaps = 25/285 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL L+HN +  L   L  L  L  L+VS N+L+ LP ++  L  L++LDV  N +  
Sbjct: 136 ELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTA 195

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P ++    AL + D SSN+L+ LP  +     L     S   + +LP    + + +  L
Sbjct: 196 FPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESL 255

Query: 166 DVEGNKLTV---------------LSNNLIASWTM-------LTELIASKNLLNGMPETI 203
            ++ N L                 LS+NL   +         L EL  S+N L  +P  I
Sbjct: 256 MLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLI 315

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
             L RL+ L L  NRI  +P SI     L E  +  N ++ LP   G+LS++G   +  N
Sbjct: 316 SGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDN 375

Query: 264 QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            L +   E C   +  +      L+   P +       KLLL G+
Sbjct: 376 PLIQPPYEVCMKGIPYIAAYQKELAHSQPAVQPRL---KLLLMGH 417



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 140/310 (45%), Gaps = 51/310 (16%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPEDLADCSK-MS 163
           +P  +G   AL   +  +N L+E+P  LG  L +L       N    LP  +A+    ++
Sbjct: 58  LPANLGDIEAL---NLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLT 114

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +LDV  N+LT L   ++++   L +L  S N L  +P  +G+L+ L  LD+  NR+  +P
Sbjct: 115 ELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLP 174

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
            S+S  C                     LS+L TLD+  NQL  +  +  QL  L  LD+
Sbjct: 175 DSLS--C---------------------LSRLRTLDVDHNQLTAFPRQLLQLVALEELDV 211

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           S+N L GLP +I  +  L+ L L+G  L TL +          L  L S + +N   +A 
Sbjct: 212 SSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCE------LASLESLMLDNNGLQAL 265

Query: 343 TTKEDLITMATRLSVTS----------------KELSLEGMNLSAIPSEIWEAGEITKLD 386
             +   +     L+++S                +EL L    L+++PS I   G +  L 
Sbjct: 266 PAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLW 325

Query: 387 LSRNSIQELP 396
           L  N I+ LP
Sbjct: 326 LDNNRIRYLP 335



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 92/182 (50%), Gaps = 1/182 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L ++ N +  L ED+  L  L +L +S  +L  LPA   EL  L+SL +  N + 
Sbjct: 204 VALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQ 263

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P +      L   + SSN  +E P++L     L +   S N +TS+P  ++   ++  
Sbjct: 264 ALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLT 323

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L ++ N++  L ++++   T L EL+   N +  +P+  G LSR+    +  N ++  P 
Sbjct: 324 LWLDNNRIRYLPDSIV-ELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPY 382

Query: 225 SI 226
            +
Sbjct: 383 EV 384



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 21/177 (11%)

Query: 237 MGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 293
           +GNN L  +P  LG  L  L  L L  N+         +L   L+ LD+S+N L+ L  E
Sbjct: 70  LGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAE 129

Query: 294 I-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           +   +  LRKL L+ N L  L + L        L +L          E   +   L  + 
Sbjct: 130 VVSALRELRKLNLSHNQLPALPAQL------GALAHL---------EELDVSFNRLAHLP 174

Query: 353 TRLSVTSK--ELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             LS  S+   L ++   L+A P ++ +   + +LD+S N ++ LP ++S+  +L++
Sbjct: 175 DSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKI 231


>gi|410037727|ref|XP_516869.3| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Pan troglodytes]
          Length = 573

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 182/396 (45%), Gaps = 36/396 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L    L+++P  + KN               L+ L L  N+++ L +++ N   L  +
Sbjct: 136 LRLYQTDLKEIPVVICKNLHH------------LELLGLTGNHLKCLPKEIVNQTKLREI 183

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+    P  +  L+ L+ +D+  N I  IP+EIG  T L KF  +SN L  LP+SL
Sbjct: 184 YLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASL 243

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +C  LS    S+N + S+P+ LA+  KM+++ + GN+L  +   LI  WT L  L    
Sbjct: 244 CQCSQLSVLDLSHNLLHSIPKSLAELRKMTEIGLSGNRLEKVP-RLICRWTSLHLLYLGN 302

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
             L+ +  +   L  L  LDL QN +   P  I    +L    + +N +  LP+ELG LS
Sbjct: 303 TGLHRLRGSFRCLVNLRFLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLS 362

Query: 254 KLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           KL  L L  N+   +  E   L    +L +       L+ +P  I K+ +L++L +  N 
Sbjct: 363 KLKILGLTGNEFLSFPEEVLSLASLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNH 422

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE--DLITMATRLSVTSKELSLEGM 367
           L  L  SL + P   +L           D   +  K+  D I  A  L    KEL LE  
Sbjct: 423 LEYLPVSLGSMPNLEVL-----------DCRHNLLKQLPDAICQAQAL----KELRLEDN 467

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            L+ +P  +     +  L L  N ++E P E+  CA
Sbjct: 468 LLTHLPENLDSLVNLKVLTLMDNPMEEPPKEV--CA 501



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 150/336 (44%), Gaps = 13/336 (3%)

Query: 73  LNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           L +    L E+P  I + LH L+ L ++ N +  +P EI + T L +     NQ +  P 
Sbjct: 136 LRLYQTDLKEIPVVICKNLHHLELLGLTGNHLKCLPKEIVNQTKLREIYLKRNQFEVFPQ 195

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            L     L       N I ++PE++   + + K  +  N L VL  +L    + L+ L  
Sbjct: 196 ELCVLYTLEIIDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASL-CQCSQLSVLDL 254

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S NLL+ +P+++  L ++  + L  NR+  +P  I    SL   Y+GN  L  L      
Sbjct: 255 SHNLLHSIPKSLAELRKMTEIGLSGNRLEKVPRLICRWTSLHLLYLGNTGLHRLRGSFRC 314

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LDL  N L    ++ C L+ L VL L +N +  LP E+G ++ L+ L LTGN  
Sbjct: 315 LVNLRFLDLSQNHLDHCPLQICALKNLEVLGLDDNKIGQLPSELGSLSKLKILGLTGN-- 372

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
                  ++ P   L      +L   +D     T    +    R   + KEL +E  +L 
Sbjct: 373 -----EFLSFPEEVLSLASLEKLYIGQDQGFKLT---YVPEHIRKLQSLKELYIENNHLE 424

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P  +     +  LD   N +++LP  +    +L+
Sbjct: 425 YLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQALK 460



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 87/226 (38%), Gaps = 39/226 (17%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           R   +D     + +IP  I     L E ++ NN +  +P E+ +L  +  L L  N L+ 
Sbjct: 39  RTFFIDASNQSLTAIPLEIFTFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRS 98

Query: 268 YC-------------------------VEACQLRLSVLDLSNNSLSGLPPEIGK-MTTLR 301
            C                         V +    L  L L    L  +P  I K +  L 
Sbjct: 99  LCPALGLLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVICKNLHHLE 158

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L LTGN L+ L   +VN  T     YL+        ++     ++L  + T L +    
Sbjct: 159 LLGLTGNHLKCLPKEIVNQ-TKLREIYLKR-------NQFEVFPQELCVLYT-LEI---- 205

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           + L+   + AIP EI     + K  ++ N++  LP  L  C+ L V
Sbjct: 206 IDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASLCQCSQLSV 251


>gi|395850250|ref|XP_003797708.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Otolemur garnettii]
          Length = 1052

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 143/295 (48%), Gaps = 28/295 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRN-LPLLTVLNVSHNKLSELPAAIGEL-HMLKSLDVSFNSI 103
           D++ L L +N +E++ + L + L  L VL +  N+ + LP A+ EL H L  LDVS N +
Sbjct: 64  DIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 104 MKIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
             +  E+ SA   L K + S NQL  LP+ LG    L +   S N +  LP+  +  S++
Sbjct: 124 TTLGSEVVSALRELRKLNLSHNQLPALPTQLGTLAQLEELDVSFNRLAHLPDSFSCLSRL 183

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
             LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    + ++
Sbjct: 184 RTLDVDHNQLTAFPRQLL-QLASLEELDVSSNRLQGLPEDISALRALKILWLSGAELGTL 242

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL------- 275
           P+      SL    + NN L ALPA+  +L +L  L+L SN L+E+      L       
Sbjct: 243 PAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELY 302

Query: 276 -----------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
                            RL  L L NN +  LP  I ++T L +L+L GN +  L
Sbjct: 303 LSRNQLTSVPSLIAGLSRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVL 357



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 130/276 (47%), Gaps = 28/276 (10%)

Query: 70  LTVLNVSHNKLSE------------------------LPAAIGEL-HMLKSLDVSFNSIM 104
           + VLN+ +N L E                        LP A+ EL H L  LDVS N + 
Sbjct: 65  IEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 124

Query: 105 KIPDEIGSA-TALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
            +  E+ SA   L K + S NQL  LP+ LG    L +   S N +  LP+  +  S++ 
Sbjct: 125 TLGSEVVSALRELRKLNLSHNQLPALPTQLGTLAQLEELDVSFNRLAHLPDSFSCLSRLR 184

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            LDV+ N+LT     L+     L EL  S N L G+PE I +L  L  L L    + ++P
Sbjct: 185 TLDVDHNQLTAFPRQLL-QLASLEELDVSSNRLQGLPEDISALRALKILWLSGAELGTLP 243

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
           +      SL    + NN L ALPA+  +L +L  L+L SN L+E+      L  L  L L
Sbjct: 244 AGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYL 303

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
           S N L+ +P  I  ++ L  L L  N +R L  S+V
Sbjct: 304 SRNQLTSVPSLIAGLSRLLTLWLDNNRIRYLPDSIV 339



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 132/268 (49%), Gaps = 7/268 (2%)

Query: 47  LQKLILAHNNIEKL-KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           L +L ++HN +  L  E +  L  L  LN+SHN+L  LP  +G L  L+ LDVSFN +  
Sbjct: 113 LTELDVSHNRLTTLGSEVVSALRELRKLNLSHNQLPALPTQLGTLAQLEELDVSFNRLAH 172

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +PD     + L   D   NQL   P  L +  +L +   S+N +  LPED++    +  L
Sbjct: 173 LPDSFSCLSRLRTLDVDHNQLTAFPRQLLQLASLEELDVSSNRLQGLPEDISALRALKIL 232

Query: 166 DVEGNKLTVLSNNL--IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            + G +L  L      +AS   L  L+   N L  +P     L RL  L+L  N +   P
Sbjct: 233 WLSGAELGTLPAGFCELAS---LESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFP 289

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
           +++     L E Y+  N L+++P+ +  LS+L TL L +N+++       +L  L  L L
Sbjct: 290 AALLPLAGLEELYLSRNQLTSVPSLIAGLSRLLTLWLDNNRIRYLPDSIVELTGLEELVL 349

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
             N ++ LP   G+++ +    +  NPL
Sbjct: 350 QGNQIAVLPDNFGQLSRVGLWKIKDNPL 377



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 127/286 (44%), Gaps = 27/286 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+KL L+HN +  L   L  L  L  L+VS N+L+ LP +   L  L++LDV  N +  
Sbjct: 136 ELRKLNLSHNQLPALPTQLGTLAQLEELDVSFNRLAHLPDSFSCLSRLRTLDVDHNQLTA 195

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSL---------------------GRC--LNLSDF 142
            P ++    +L + D SSN+L+ LP  +                     G C   +L   
Sbjct: 196 FPRQLLQLASLEELDVSSNRLQGLPEDISALRALKILWLSGAELGTLPAGFCELASLESL 255

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              NN + +LP   +   ++  L++  N L      L+     L EL  S+N L  +P  
Sbjct: 256 MLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALL-PLAGLEELYLSRNQLTSVPSL 314

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           I  LSRL+ L L  NRI  +P SI     L E  +  N ++ LP   G+LS++G   +  
Sbjct: 315 IAGLSRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKD 374

Query: 263 NQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           N L +   E C   +  +      L+   P +       KLLL G+
Sbjct: 375 NPLIQPPYEVCMKGIPYIAAYQKELAHSQPAVQPRL---KLLLMGH 417



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 135/294 (45%), Gaps = 42/294 (14%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCL-NLSDFKASNNCITSLPEDLADCSK-MS 163
           +P  IG    L   +  +N L+E+P  LG  L +L       N    LP  +A+    ++
Sbjct: 58  LPANIGDIEVL---NLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLT 114

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           +LDV  N+LT L + ++++   L +L  S N L  +P  +G+L++L  LD+  NR+  +P
Sbjct: 115 ELDVSHNRLTTLGSEVVSALRELRKLNLSHNQLPALPTQLGTLAQLEELDVSFNRLAHLP 174

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDL 282
            S S  C                     LS+L TLD+  NQL  +  +  QL  L  LD+
Sbjct: 175 DSFS--C---------------------LSRLRTLDVDHNQLTAFPRQLLQLASLEELDV 211

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
           S+N L GLP +I  +  L+ L L+G  L TL +          L  L S + +N   +A 
Sbjct: 212 SSNRLQGLPEDISALRALKILWLSGAELGTLPAGFCE------LASLESLMLDNNGLQA- 264

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
                L    +RL    K L+L    L   P+ +     + +L LSRN +  +P
Sbjct: 265 -----LPAQFSRLQ-RLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVP 312



 Score = 44.7 bits (104), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 25/179 (13%)

Query: 237 MGNNALSALPAELG-KLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLSNNSLSGLPPE 293
           +GNN L  +P  LG  L  L  L L  N+         +L   L+ LD+S+N L+ L  E
Sbjct: 70  LGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTTLGSE 129

Query: 294 I-GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK----EDL 348
           +   +  LRKL L+ N L  L + L               L + E+ + S  +     D 
Sbjct: 130 VVSALRELRKLNLSHNQLPALPTQL-------------GTLAQLEELDVSFNRLAHLPDS 176

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            +  +RL    + L ++   L+A P ++ +   + +LD+S N +Q LP ++S+  +L++
Sbjct: 177 FSCLSRL----RTLDVDHNQLTAFPRQLLQLASLEELDVSSNRLQGLPEDISALRALKI 231


>gi|195500876|ref|XP_002097562.1| GE24422 [Drosophila yakuba]
 gi|194183663|gb|EDW97274.1| GE24422 [Drosophila yakuba]
          Length = 928

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 154/324 (47%), Gaps = 6/324 (1%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E D WW  V L  L L+ N +  L   + NL  LTVL +  N L ELP  IG+L  L  L
Sbjct: 275 EEDAWWNQVPLNNLDLSSNTLTHLSPKIVNLQSLTVLTLHDNALVELPPEIGKLEKLMRL 334

Query: 97  DVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +VS N + ++P EI S   L   + S N+  EL   +     L      +N I SLP  +
Sbjct: 335 NVSHNKLSQLPREIYSLPELRHLNISYNEFNELNPDISDLHMLEFLDGGHNNIQSLPGGI 394

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
               +++ L +  N +  L  +L+ +   L ++   +N L  +PE +G L +L  L L  
Sbjct: 395 GFLVRLTALLLPYNHIKELPPDLV-NMRSLQKIDLMQNDLTCLPEDMGLLRKLECLYLQH 453

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVE-ACQ 274
           N IL +P    G  +L+E +  NN +  +P A    L  L  LDL  N++ E   E    
Sbjct: 454 NDILELP-EFEGNETLSELHASNNFIKTIPKAMCSNLPHLKILDLRDNKITELPDELCLL 512

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
             L+ LD+SNN++S LP  +  +  L  L + GNP++T+R  ++   T  +LK L  R  
Sbjct: 513 RNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTSRILKTLHERAL 572

Query: 335 ENEDSEASTTKEDLITMATRLSVT 358
                E     E   +    +SVT
Sbjct: 573 AKAKEEGGGVDEAFTSAG--ISVT 594



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 5/191 (2%)

Query: 149 ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +T +P+ +   ++   +  +D   N+L+ L N L     ++TEL+ S N++  +P+ I  
Sbjct: 737 LTEVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQ 796

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            +R+  L+L  N +  +P+      +L E  + NN    +P  + +L  L       N +
Sbjct: 797 FTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFQFIPNCVYELKGLEIFIASENHI 856

Query: 266 KEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           K   V   Q   RLS LDL NN +  +PP +G +T +  L L GNP R  R  ++   T 
Sbjct: 857 KMLNVSGLQSMPRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTD 916

Query: 324 ALLKYLRSRLP 334
           A++ YLR R+P
Sbjct: 917 AIMSYLRDRIP 927



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 39/302 (12%)

Query: 152 LPEDLADCSKMSKLDVEGN--KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRL 209
           LPE L D ++        N  +LT+   +   +   L  L  S N L  +   I +L  L
Sbjct: 249 LPERLYDINEADADSKAVNLEQLTIKEEDAWWNQVPLNNLDLSSNTLTHLSPKIVNLQSL 308

Query: 210 IRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYC 269
             L LH N ++ +P  I     L    + +N LS LP E+  L +L  L++  N+  E  
Sbjct: 309 TVLTLHDNALVELPPEIGKLEKLMRLNVSHNKLSQLPREIYSLPELRHLNISYNEFNELN 368

Query: 270 VEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT------ 322
            +   L  L  LD  +N++  LP  IG +  L  LLL  N ++ L   LVN  +      
Sbjct: 369 PDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDL 428

Query: 323 --------PALLKYLRS------------RLPENEDSEAST---TKEDLITMATRLSVTS 359
                   P  +  LR              LPE E +E  +      + I    +   ++
Sbjct: 429 MQNDLTCLPEDMGLLRKLECLYLQHNDILELPEFEGNETLSELHASNNFIKTIPKAMCSN 488

Query: 360 ----KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA---SLQVKFSDL 412
               K L L    ++ +P E+     + +LD+S N+I  LP  LSS A   SLQV+ + +
Sbjct: 489 LPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPI 548

Query: 413 VT 414
            T
Sbjct: 549 KT 550



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 15/186 (8%)

Query: 2   DRILKAARTSG--SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEK 59
           D++ + AR  G   ++ +   L  +PN +    D   E            L+L++N I  
Sbjct: 742 DQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTE------------LVLSNNVIGY 789

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           + + +     ++ LN+S+N L++LP   G L+ L+ L+++ N    IP+ +     L  F
Sbjct: 790 VPQFISQFTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFQFIPNCVYELKGLEIF 849

Query: 120 DCSSNQLKEL-PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
             S N +K L  S L     LS     NN I ++P  L + + ++ L++ GN      + 
Sbjct: 850 IASENHIKMLNVSGLQSMPRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQ 909

Query: 179 LIASWT 184
           ++   T
Sbjct: 910 ILMKGT 915


>gi|115460588|ref|NP_001053894.1| Os04g0618700 [Oryza sativa Japonica Group]
 gi|113565465|dbj|BAF15808.1| Os04g0618700 [Oryza sativa Japonica Group]
          Length = 1183

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 127/382 (33%), Positives = 188/382 (49%), Gaps = 24/382 (6%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           LQ+L L  N +   +   L NL  LT+L +S N LS  LPA+IG L  L+ L V  NS+ 
Sbjct: 340 LQRLSLHANRLAGTVPASLTNLVNLTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLS 399

Query: 105 -KIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCSK 161
            +IP  I + T L     S N     LP+ LGR  +L       N +   +P+DL DC +
Sbjct: 400 GQIPASISNCTQLANASMSFNLFSGPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQ 459

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 220
           + KLD+  N  T   + L+     LT L    N L+G +PE IG++++LI L L +NR  
Sbjct: 460 LQKLDLSENSFTGGLSRLVGQLGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFA 519

Query: 221 S-IPSSISGCCSLAEFYMGNNAL-SALPAELGKLSKLGTLDLHSNQLKEYCVEA-CQLR- 276
             +P+SIS   SL    +G+N L    PAE+ +L +L  L   SN+      +A   LR 
Sbjct: 520 GHVPASISNMSSLQLLDLGHNRLDGVFPAEVFELRQLTILGAGSNRFAGPIPDAVANLRS 579

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           LS LDLS+N L+G +P  +G++  L  L L+ N L       V      +  YL   L  
Sbjct: 580 LSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRLAGAIPGAVIASMSNVQMYL--NLSN 637

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-E 394
           N  + A   +   + M   + +++ +LS        +P+ +     +  LDLS NS+  E
Sbjct: 638 NAFTGAIPAEIGGLVMVQTIDLSNNQLS------GGVPATLAGCKNLYSLDLSGNSLTGE 691

Query: 395 LP----PELSSCASLQVKFSDL 412
           LP    P+L    +L +  +DL
Sbjct: 692 LPANLFPQLDLLTTLNISGNDL 713



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 179/411 (43%), Gaps = 72/411 (17%)

Query: 46  DLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           +L++L+++ N     +   L N   +  L ++ N L+  +P+ IG+L  L+  +   N++
Sbjct: 147 ELEQLVVSSNYFAGGIPSSLCNCSAMWALALNVNNLTGAIPSCIGDLSNLEIFEAYLNNL 206

Query: 104 -MKIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
             ++P  +     ++  D S NQL   +P  +G   NL   +   N  +  +P +L  C 
Sbjct: 207 DGELPPSMAKLKGIMVVDLSCNQLSGSIPPEIGDLSNLQILQLYENRFSGHIPRELGRCK 266

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            ++ L++  N  T                         +P  +G L+ L  + L++N + 
Sbjct: 267 NLTLLNIFSNGFT-----------------------GEIPGELGELTNLEVMRLYKNALT 303

Query: 221 S-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LR 276
           S IP S+  C SL    +  N L+  +P ELG+L  L  L LH+N+L      +    + 
Sbjct: 304 SEIPRSLRRCVSLLNLDLSMNQLAGPIPPELGELPSLQRLSLHANRLAGTVPASLTNLVN 363

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR----------------TLRSSLVN 319
           L++L+LS N LSG LP  IG +  LR+L++  N L                 ++  +L +
Sbjct: 364 LTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLSGQIPASISNCTQLANASMSFNLFS 423

Query: 320 GPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKE---------------- 361
           GP PA L  L+S   L   ++S A    +DL        +   E                
Sbjct: 424 GPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQLQKLDLSENSFTGGLSRLVGQLGN 483

Query: 362 ---LSLEGMNLSA-IPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQV 407
              L L+G  LS  IP EI    ++  L L RN     +P  +S+ +SLQ+
Sbjct: 484 LTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFAGHVPASISNMSSLQL 534



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 112/259 (43%), Gaps = 16/259 (6%)

Query: 64  LRNLPLLTVLNVSHNKL-SELPAAIGELHMLKSLDVSFNSIMK-IPDEIGSATALVKFDC 121
           + N+  L +L++ HN+L    PA + EL  L  L    N     IPD + +  +L   D 
Sbjct: 526 ISNMSSLQLLDLGHNRLDGVFPAEVFELRQLTILGAGSNRFAGPIPDAVANLRSLSFLDL 585

Query: 122 SSNQLK-ELPSSLGRCLNLSDFKASNNCIT-SLPEDLADCSKMSK----LDVEGNKLTVL 175
           SSN L   +P++LGR   L     S+N +  ++P   A  + MS     L++  N  T  
Sbjct: 586 SSNMLNGTVPAALGRLDQLLTLDLSHNRLAGAIPG--AVIASMSNVQMYLNLSNNAFTGA 643

Query: 176 SNNLIASWTMLTELIASKNLL-NGMPETIGSLSRLIRLDLHQNRILS-IPSSISGCCSLA 233
               I    M+  +  S N L  G+P T+     L  LDL  N +   +P+++     L 
Sbjct: 644 IPAEIGGLVMVQTIDLSNNQLSGGVPATLAGCKNLYSLDLSGNSLTGELPANLFPQLDLL 703

Query: 234 EF--YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNNSLSG 289
                 GN+    +PA++  L  + TLD+  N        A      L  L+LS+N+  G
Sbjct: 704 TTLNISGNDLDGEIPADIAALKHIQTLDVSRNAFAGAIPPALANLTALRSLNLSSNTFEG 763

Query: 290 LPPEIGKMTTLRKLLLTGN 308
             P+ G    L    L GN
Sbjct: 764 PVPDGGVFRNLTMSSLQGN 782


>gi|260806243|ref|XP_002597994.1| hypothetical protein BRAFLDRAFT_221597 [Branchiostoma floridae]
 gi|229283264|gb|EEN54006.1| hypothetical protein BRAFLDRAFT_221597 [Branchiostoma floridae]
          Length = 343

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 162/327 (49%), Gaps = 40/327 (12%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +++LS + L  VP EV+             ++ D+++L L++N +  + E++  L  L  
Sbjct: 53  TIDLSGKRLTSVPAEVF-------------DSKDVERLDLSNNRLTSIPEEIGQLQKLRE 99

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L + +N L++LP AI  L  L+ +DVS N +  +PD I S   L +     N+ KE+P  
Sbjct: 100 LKLDNNLLTQLPQAITTLPNLQHIDVSDNKLETLPDGI-SRLQLHELFLHDNRFKEIPEE 158

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + + L L+ F  S   +TS+P ++ D +     D+E                    L+ S
Sbjct: 159 VCKLLQLNTFYLSGKGLTSVPAEVFDAT-----DIE-------------------RLVLS 194

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG-NNALSALPAELGK 251
           +N L  +PE IG L +L  L L  N +  +P +I+   +L    +  NN L +LP  +G+
Sbjct: 195 ENRLTSIPEEIGQLQKLRELKLENNLLTELPQAITTLPNLQHIDVSHNNGLESLPGGIGE 254

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L +LG L++  N+      +   L  +  L LS+N +S LP  + ++ TL+ + +TGNPL
Sbjct: 255 LEQLGYLNIAGNKFTSVPEQIMMLSNIGKLILSDNKISRLPVTLSRLATLKDMNITGNPL 314

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENE 337
               + +    T A++ +LR    E E
Sbjct: 315 TYPPADVCKKGTAAIMDFLRRETKEGE 341



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 136/329 (41%), Gaps = 75/329 (22%)

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK----LDVEGNKLTVLSN 177
           S N+L+ LP  + R L L +     N    +PE++    K+      +D+ G +LT    
Sbjct: 8   SDNKLETLPDGISR-LQLHELYLEKNRFKKIPEEVYLQPKVVNGLLTIDLSGKRLT---- 62

Query: 178 NLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYM 237
                 ++  E+  SK++               RLDL  NR+ SIP  I     L E  +
Sbjct: 63  ------SVPAEVFDSKDV--------------ERLDLSNNRLTSIPEEIGQLQKLRELKL 102

Query: 238 GNNALSALPAELGKLSKLGTLD----------------------LHSNQLKEYCVEACQ- 274
            NN L+ LP  +  L  L  +D                      LH N+ KE   E C+ 
Sbjct: 103 DNNLLTQLPQAITTLPNLQHIDVSDNKLETLPDGISRLQLHELFLHDNRFKEIPEEVCKL 162

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLP 334
           L+L+   LS   L+ +P E+   T + +L+L+ N L ++   +        L+ LR    
Sbjct: 163 LQLNTFYLSGKGLTSVPAEVFDATDIERLVLSENRLTSIPEEI------GQLQKLRELKL 216

Query: 335 EN----EDSEASTTKEDL--ITMATRLSVTS-----------KELSLEGMNLSAIPSEIW 377
           EN    E  +A TT  +L  I ++    + S             L++ G   +++P +I 
Sbjct: 217 ENNLLTELPQAITTLPNLQHIDVSHNNGLESLPGGIGELEQLGYLNIAGNKFTSVPEQIM 276

Query: 378 EAGEITKLDLSRNSIQELPPELSSCASLQ 406
               I KL LS N I  LP  LS  A+L+
Sbjct: 277 MLSNIGKLILSDNKISRLPVTLSRLATLK 305


>gi|62079263|ref|NP_001014290.1| leucine-rich repeat-containing protein 1 [Rattus norvegicus]
 gi|50925909|gb|AAH79423.1| Leucine rich repeat containing 1 [Rattus norvegicus]
          Length = 524

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 165/351 (47%), Gaps = 44/351 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N + ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 46  NQLRELPEQFFQLVKLRKLGLSDNEVQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 105

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 106 ALQVADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I S+P SI     L + ++  N LS LP E+G L  L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNL 222

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDL-------------------------SNNSLSGL 290
             LD+  N+L+    E   L +S+ DL                           N L+ L
Sbjct: 223 LCLDVSENRLERLPEEISGL-ISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQL 281

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P  IG    L +L+LT N L TL +S+        LK L + L  + +   S  KE  I 
Sbjct: 282 PEAIGDCENLTELVLTENRLLTLPTSI------GKLKKLNN-LNADRNKLVSLPKE--IG 332

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
               L+V      +    L+ IPSE+ +A E+  LD++ N +  LP  L++
Sbjct: 333 GCCSLTV----FCIRDNRLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTT 379



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSE 211

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +   ++L+D   S N + ++P+ +    K+S L
Sbjct: 212 LPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLSIL 271

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+LT L    I     LTEL+ ++N L  +P +IG L +L  L+  +N+++S+P  
Sbjct: 272 KLDQNRLTQLP-EAIGDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKE 330

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +P+E+ +  +L  LD+  N+L    +    L+L  L LS+N
Sbjct: 331 IGGCCSLTVFCIRDNRLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTLKLKALWLSDN 390

Query: 286 S 286
            
Sbjct: 391 Q 391



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 72/128 (56%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           + L  L+++ N +E + + +  L  L++L +  N+L++LP AIG+   L  L ++ N ++
Sbjct: 243 ISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLL 302

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    L   +   N+L  LP  +G C +L+ F   +N +T +P +++   ++  
Sbjct: 303 TLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCIRDNRLTRIPSEVSQAMELHV 362

Query: 165 LDVEGNKL 172
           LDV GN+L
Sbjct: 363 LDVAGNRL 370



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 22/234 (9%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N +  +P  I+    L E  +  N +  +
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEVQRLPPEIANFMQLVELDVSRNDIPEI 97

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 98  PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 157

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE--DSEASTTKEDLITMATRLSVTSKEL 362
           L  N L  L         P  L  LR RL E +  ++E  +  E +  +     +  K+L
Sbjct: 158 LRENLLTYL---------PDSLTQLR-RLEELDLGNNEIYSLPESIGAL-----LHLKDL 202

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
            L+G  LS +P EI     +  LD+S N ++ LP E+S   SL    +DLV ++
Sbjct: 203 WLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISL----TDLVVSQ 252


>gi|403267431|ref|XP_003925836.1| PREDICTED: protein LAP2 isoform 2 [Saimiri boliviensis boliviensis]
          Length = 1419

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 177/399 (44%), Gaps = 75/399 (18%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+ S+ SL  VP E++ NF++            L++L L  N IE+L + L N   L  
Sbjct: 26  TLDYSHCSLEQVPKEIF-NFEKT-----------LEELYLDANQIEELPKQLFNCQSLHK 73

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +LP  
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG 133

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
             + LNL+    ++  +  LP +    +K+  L++  N+L +L                 
Sbjct: 134 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML----------------- 176

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +G L
Sbjct: 177 -------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSL 229

Query: 253 SKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  N L
Sbjct: 230 KQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L  S+                              LI++        +EL      + 
Sbjct: 289 MYLPDSIGG----------------------------LISV--------EELDCSFNEVE 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           A+PS I E   +       N +Q+LPPE+ S  ++ V F
Sbjct: 313 ALPSSIGELTNLRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 158/345 (45%), Gaps = 52/345 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIG L  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGELTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN---PLRTLRSSLVNGPTPALL-KYLRSRLPENED 338
             L  + L+ N   PL  L+    +     +L  Y+  + P  ED
Sbjct: 391 QQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTED 435



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 42/240 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S LP    ++  L +
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L                  A L++L    P N                T+L +    L
Sbjct: 143 LYLND----------------AFLEFL----PAN------------FGRLTKLQI----L 166

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG 422
            L    L  +P  +    ++ +LDL  N   E+P  L   + L+  + D   N+ + I G
Sbjct: 167 ELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD--ANRLTFIPG 224



 Score = 38.1 bits (87), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E  +L+     HN +++L  ++ +   +TVL +  NKL  LP  +G++  LK +++S N 
Sbjct: 320 ELTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNR 379

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKEL 129
           +  +P        L     S NQ K L
Sbjct: 380 LKNLPFSFTKLQQLTAMWLSDNQSKPL 406


>gi|403267429|ref|XP_003925835.1| PREDICTED: protein LAP2 isoform 1 [Saimiri boliviensis boliviensis]
          Length = 1371

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 177/399 (44%), Gaps = 75/399 (18%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           +L+ S+ SL  VP E++ NF++            L++L L  N IE+L + L N   L  
Sbjct: 26  TLDYSHCSLEQVPKEIF-NFEKT-----------LEELYLDANQIEELPKQLFNCQSLHK 73

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +LP  
Sbjct: 74  LSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDG 133

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
             + LNL+    ++  +  LP +    +K+  L++  N+L +L                 
Sbjct: 134 FSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML----------------- 176

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +G L
Sbjct: 177 -------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSL 229

Query: 253 SKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  N L
Sbjct: 230 KQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQL 288

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             L  S+                              LI++        +EL      + 
Sbjct: 289 MYLPDSIGG----------------------------LISV--------EELDCSFNEVE 312

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           A+PS I E   +       N +Q+LPPE+ S  ++ V F
Sbjct: 313 ALPSSIGELTNLRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 158/345 (45%), Gaps = 52/345 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIG L  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGELTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN---PLRTLRSSLVNGPTPALL-KYLRSRLPENED 338
             L  + L+ N   PL  L+    +     +L  Y+  + P  ED
Sbjct: 391 QQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTED 435



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 42/240 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S LP    ++  L +
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L                  A L++L    P N                T+L +    L
Sbjct: 143 LYLND----------------AFLEFL----PAN------------FGRLTKLQI----L 166

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG 422
            L    L  +P  +    ++ +LDL  N   E+P  L   + L+  + D   N+ + I G
Sbjct: 167 ELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD--ANRLTFIPG 224


>gi|421132053|ref|ZP_15592227.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410356605|gb|EKP03922.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 403

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 171/335 (51%), Gaps = 23/335 (6%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S N+L+ LP  IG+L  L+ L +  N +  +P+EIG    L   D + N++   P 
Sbjct: 50  ILDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
              +  NL     + N ++ LPE++ + ++++ L++  N+LT L   +     +LT L  
Sbjct: 110 EFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLT-LYL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N LN +P  +G L  LI L L  N+++S+P  I    +L   ++ +N  + LP E+GK
Sbjct: 169 SGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDNEFNTLPEEIGK 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LD+  N+   +  E  +L +L+VL+LSNN L+ LP EIG++  L  L L+ N L
Sbjct: 229 LENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVNKL 288

Query: 311 RTLRSSLVNGPTPALLKYLR----SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            +L + +       +L YL     S LPE             I    +LS+    L L+ 
Sbjct: 289 NSLPNEMGQLKNLDVL-YLNGNNLSNLPEE------------IGELKKLSI----LKLDS 331

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             L+ +P EI +   +  L LS N +  +P EL  
Sbjct: 332 NQLTILPKEIGQLENLVTLSLSNNKLISIPNELGQ 366



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 142/273 (52%), Gaps = 6/273 (2%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           ++W+  +L+ L L  N +  L E++R L  L VLN++ N+L+ LP  IG+L  L +L +S
Sbjct: 110 EFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLTLYLS 169

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N++  +P+E+G    L+    S N+L  LP  + +  NL      +N   +LPE++   
Sbjct: 170 GNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDNEFNTLPEEIGKL 229

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
             +  LD+  N+ +         W +  L  L  S N L  +P+ IG L  L  L L  N
Sbjct: 230 ENLKILDISRNRFSTFPKEF---WKLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVN 286

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++ S+P+ +    +L   Y+  N LS LP E+G+L KL  L L SNQL     E  QL  
Sbjct: 287 KLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSILKLDSNQLTILPKEIGQLEN 346

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           L  L LSNN L  +P E+G++  L  L L  NP
Sbjct: 347 LVTLSLSNNKLISIPNELGQLRNLSLLNLRYNP 379



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 146/310 (47%), Gaps = 15/310 (4%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK       L+LS+  L  +P E+              + V+L++L L +N +  L E++
Sbjct: 42  LKTPNEVRILDLSSNRLTTLPKEI-------------GQLVNLERLYLLNNELTTLPEEI 88

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L+++ N++S  P    +L  L+ L ++ N +  +P+EI     L   + + N
Sbjct: 89  GKLENLKTLDITRNRISTFPKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDN 148

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL  LP  +G+  NL     S N + SLP ++     +  L + GNKL  L    I    
Sbjct: 149 QLTTLPKEIGQLENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKE-IRQLG 207

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L    N  N +PE IG L  L  LD+ +NR  + P        L    + NN L+ 
Sbjct: 208 NLGILHLFDNEFNTLPEEIGKLENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTT 267

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+G+L  L  L L  N+L     E  QL+ L VL L+ N+LS LP EIG++  L  L
Sbjct: 268 LPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSIL 327

Query: 304 LLTGNPLRTL 313
            L  N L  L
Sbjct: 328 KLDSNQLTIL 337



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 144/309 (46%), Gaps = 48/309 (15%)

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
           +K P+E+         D SSN+L  LP  +G+ +NL      NN +T+LPE++     + 
Sbjct: 42  LKTPNEVRI------LDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLK 95

Query: 164 KLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
            LD+  N+++         W +  L  L  + N L+ +PE I  L+RL  L+L+ N++ +
Sbjct: 96  TLDITRNRISTFPKEF---WKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTT 152

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 280
           +P  I    +L   Y+  N L++LP E+G+L  L +L L  N+L     E  QL  L +L
Sbjct: 153 LPKEIGQLENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGIL 212

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
            L +N  + LP EIGK+  L+                       +L   R+R        
Sbjct: 213 HLFDNEFNTLPEEIGKLENLK-----------------------ILDISRNRF------- 242

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
            ST  ++   +  +L+V    L+L    L+ +P EI +   +  L LS N +  LP E+ 
Sbjct: 243 -STFPKEFWKLK-KLNV----LNLSNNQLTTLPKEIGQLENLFILHLSVNKLNSLPNEMG 296

Query: 401 SCASLQVKF 409
              +L V +
Sbjct: 297 QLKNLDVLY 305


>gi|453065260|gb|EMF06223.1| adenylate cyclase [Serratia marcescens VGH107]
          Length = 293

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 124/249 (49%), Gaps = 25/249 (10%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  +++  N+L+  PA+I +   L+ L++S N + ++P EIG    L  FD   N+  EL
Sbjct: 34  LRKISLYDNQLTAFPASILQHRNLQVLNISCNQLDRLPPEIGQLQQLEMFDFGHNRASEL 93

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P +LG+   L     S+N  + LP  LA    +  L+   N+L VL              
Sbjct: 94  PETLGQLHRLKYLYLSDNGFSDLPRSLAQLQLLVYLNATDNRLAVL-------------- 139

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P  I  L+ L  L L+ NRI S+P  I    +L E ++  NAL+ALPAE+
Sbjct: 140 ----------PLAIPRLAALQELRLYNNRIGSLPGEIGQLRALRELHIMKNALTALPAEM 189

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            +L +L  LD  SN + E     C+L RLS L+L  N L+ LP  IG++T LR L L  N
Sbjct: 190 AQLGELEILDAASNAIAELPAAFCRLPRLSELNLRFNQLTRLPENIGELTALRSLDLRAN 249

Query: 309 PLRTLRSSL 317
            L  L  SL
Sbjct: 250 RLSDLPESL 258



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 111/218 (50%), Gaps = 1/218 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L ++ N +++L  ++  L  L + +  HN+ SELP  +G+LH LK L +S N    
Sbjct: 56  NLQVLNISCNQLDRLPPEIGQLQQLEMFDFGHNRASELPETLGQLHRLKYLYLSDNGFSD 115

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  +     LV  + + N+L  LP ++ R   L + +  NN I SLP ++     + +L
Sbjct: 116 LPRSLAQLQLLVYLNATDNRLAVLPLAIPRLAALQELRLYNNRIGSLPGEIGQLRALREL 175

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  N LT L   + A    L  L A+ N +  +P     L RL  L+L  N++  +P +
Sbjct: 176 HIMKNALTALPAEM-AQLGELEILDAASNAIAELPAAFCRLPRLSELNLRFNQLTRLPEN 234

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           I    +L    +  N LS LP  LG+LS+L  LDL  N
Sbjct: 235 IGELTALRSLDLRANRLSDLPESLGELSRLRKLDLRWN 272



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 117/264 (44%), Gaps = 34/264 (12%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L VLN+S N+L  LP  IG+L  L+                        FD   N+  EL
Sbjct: 57  LQVLNISCNQLDRLPPEIGQLQQLE-----------------------MFDFGHNRASEL 93

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P +LG+   L     S+N  + LP  LA    +  L+   N+L VL    I     L EL
Sbjct: 94  PETLGQLHRLKYLYLSDNGFSDLPRSLAQLQLLVYLNATDNRLAVLPLA-IPRLAALQEL 152

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N +  +P  IG L  L  L + +N + ++P+ ++    L      +NA++ LPA  
Sbjct: 153 RLYNNRIGSLPGEIGQLRALRELHIMKNALTALPAEMAQLGELEILDAASNAIAELPAAF 212

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            +L +L  L+L  NQL        +L  L  LDL  N LS LP  +G+++ LRKL L  N
Sbjct: 213 CRLPRLSELNLRFNQLTRLPENIGELTALRSLDLRANRLSDLPESLGELSRLRKLDLRWN 272

Query: 309 PLRTLRSSLVNGPTPALLKYLRSR 332
                        TP ++  LR+R
Sbjct: 273 DFTH---------TPKIVDILRAR 287



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 127/289 (43%), Gaps = 25/289 (8%)

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+S G  L+L         +T L E       + K+ +  N+LT    +++     L  L
Sbjct: 7   PASTGDALDLD-----GRGLTQLDESQLTGHALRKISLYDNQLTAFPASILQHRN-LQVL 60

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L+ +P  IG L +L   D   NR   +P ++     L   Y+ +N  S LP  L
Sbjct: 61  NISCNQLDRLPPEIGQLQQLEMFDFGHNRASELPETLGQLHRLKYLYLSDNGFSDLPRSL 120

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            +L  L  L+   N+L    +   +L  L  L L NN +  LP EIG++  LR+L +  N
Sbjct: 121 AQLQLLVYLNATDNRLAVLPLAIPRLAALQELRLYNNRIGSLPGEIGQLRALRELHIMKN 180

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK-EDLITMATRLSVTSKELSLEGM 367
            L  L + +             ++L E E  +A++    +L     RL   S EL+L   
Sbjct: 181 ALTALPAEM-------------AQLGELEILDAASNAIAELPAAFCRLPRLS-ELNLRFN 226

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPP---ELSSCASLQVKFSDLV 413
            L+ +P  I E   +  LDL  N + +LP    ELS    L ++++D  
Sbjct: 227 QLTRLPENIGELTALRSLDLRANRLSDLPESLGELSRLRKLDLRWNDFT 275



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 65/127 (51%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L L +N I  L  ++  L  L  L++  N L+ LPA + +L  L+ LD + N+I ++
Sbjct: 149 LQELRLYNNRIGSLPGEIGQLRALRELHIMKNALTALPAEMAQLGELEILDAASNAIAEL 208

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P        L + +   NQL  LP ++G    L       N ++ LPE L + S++ KLD
Sbjct: 209 PAAFCRLPRLSELNLRFNQLTRLPENIGELTALRSLDLRANRLSDLPESLGELSRLRKLD 268

Query: 167 VEGNKLT 173
           +  N  T
Sbjct: 269 LRWNDFT 275



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 57/108 (52%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L +  N +  L  ++  L  L +L+ + N ++ELPAA   L  L  L++ FN + ++
Sbjct: 172 LRELHIMKNALTALPAEMAQLGELEILDAASNAIAELPAAFCRLPRLSELNLRFNQLTRL 231

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE 154
           P+ IG  TAL   D  +N+L +LP SLG    L       N  T  P+
Sbjct: 232 PENIGELTALRSLDLRANRLSDLPESLGELSRLRKLDLRWNDFTHTPK 279



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 45/85 (52%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L  A N I +L      LP L+ LN+  N+L+ LP  IGEL  L+SLD+  N +  
Sbjct: 194 ELEILDAASNAIAELPAAFCRLPRLSELNLRFNQLTRLPENIGELTALRSLDLRANRLSD 253

Query: 106 IPDEIGSATALVKFDCSSNQLKELP 130
           +P+ +G  + L K D   N     P
Sbjct: 254 LPESLGELSRLRKLDLRWNDFTHTP 278


>gi|213627581|gb|AAI71620.1| Zgc:152984 protein [Danio rerio]
          Length = 606

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 150/323 (46%), Gaps = 37/323 (11%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++ +F++            L++L L  N IE+L + L N  L
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-SFEKT-----------LEELYLDANQIEELPKQLFNCQL 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQ---- 125
           L  L++  N L+ LP  I  L  L+ LDVS N I + P+ I +   L   + S N     
Sbjct: 71  LYRLSLPDNDLTVLPPGIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKL 130

Query: 126 -------------------LKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
                              L+ LP+S GR   L   +   N +  LP+ +   +++ +LD
Sbjct: 131 PEGFTQLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHKLTQLERLD 190

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+ T +   ++   T + EL    N L  +P  IG+L +L  LD+ +N +  +   I
Sbjct: 191 LGSNEFTEVP-EVLEQLTGIRELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVEMVEEQI 249

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
           SGC +L +  + NNAL+ LP  +G L KL TL +  NQL         L  L  LD S N
Sbjct: 250 SGCENLQDLLLSNNALTQLPGSIGSLKKLSTLKVDDNQLMYLPDTIGGLSHLDELDCSFN 309

Query: 286 SLSGLPPEIGKMTTLRKLLLTGN 308
            +  LP  IG+   LR      N
Sbjct: 310 EIEALPSSIGQCVNLRTFAADHN 332



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 25/263 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L + +  L  L  L++  N+ +E+P  + +L  ++ L +  N +  +
Sbjct: 163 LQILELRENQLKMLPKSMHKLTQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTFV 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG+   L   D S N ++ +   +  C NL D   SNN +T LP  +    K+S L 
Sbjct: 223 PGMIGALKQLSYLDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGSLKKLSTLK 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L  L                        P+TIG LS L  LD   N I ++PSSI
Sbjct: 283 VDDNQLMYL------------------------PDTIGGLSHLDELDCSFNEIEALPSSI 318

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
             C +L  F   +N L+ +P E+G L  +  L LHSN+L+    E   + +L V++LS+N
Sbjct: 319 GQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLENLPEEMGDMQKLKVINLSDN 378

Query: 286 SLSGLPPEIGKMTTLRKLLLTGN 308
            L  LP    K+  +  + L+ N
Sbjct: 379 KLRNLPYSFTKLNQMTAMWLSEN 401



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 4/146 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L+L++N + +L   + +L  L+ L V  N+L  LP  IG L  L  LD SFN I  
Sbjct: 254 NLQDLLLSNNALTQLPGSIGSLKKLSTLKVDDNQLMYLPDTIGGLSHLDELDCSFNEIEA 313

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG    L  F    N L ++P  +G   N++     +N + +LPE++ D  K+  +
Sbjct: 314 LPSSIGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLENLPEEMGDMQKLKVI 373

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIA 191
           ++  NKL     NL  S+T L ++ A
Sbjct: 374 NLSDNKL----RNLPYSFTKLNQMTA 395



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 127/319 (39%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE   + +LD S  S+ ++P EI S                          L +     N
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFSFEK----------------------TLEELYLDAN 56

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + +L +  N LTVL    IA+   L EL  SKN +   PE I +  
Sbjct: 57  QIEELPKQLFNCQLLYRLSLPDNDLTVLPPG-IANLINLRELDVSKNGIQEFPENIKNCK 115

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   SL++ Y+ +  L  LPA  G+L+KL            
Sbjct: 116 VLAIVEASVNPISKLPEGFTQLLSLSQLYLNDAFLEFLPASFGRLTKL------------ 163

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                      +L+L  N L  LP  + K+T L +L L  N                   
Sbjct: 164 ----------QILELRENQLKMLPKSMHKLTQLERLDLGSN------------------- 194

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                    E +E     E L  +        +EL ++G  L+ +P  I    +++ LD+
Sbjct: 195 ---------EFTEVPEVLEQLTGI--------RELWMDGNKLTFVPGMIGALKQLSYLDV 237

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N+++ +  ++S C +LQ
Sbjct: 238 SKNNVEMVEEQISGCENLQ 256


>gi|334325168|ref|XP_001366860.2| PREDICTED: protein LAP2 isoform 1 [Monodelphis domestica]
          Length = 1448

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 159/328 (48%), Gaps = 37/328 (11%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL-------------- 175
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 176 --SNNLIASWTMLTELIASK------NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
             SN       +L +L   K      N L  +P  IGSL +L  LD+ +N I ++   IS
Sbjct: 191 LGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGLIGSLKQLTYLDVSKNNIDTVEEGIS 250

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LDLSNN 285
           GC SL +  + +N+L  LP  +G L KL TL +  NQL  Y  ++    +S+  LD S N
Sbjct: 251 GCESLQDLLLSSNSLQQLPESIGLLKKLTTLKIDENQLM-YLPDSIGGLISIEELDCSFN 309

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            +  LP  IG+++ +R      N L+ L
Sbjct: 310 EIEALPSSIGQLSNIRTFAADHNYLQQL 337



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 143/311 (45%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   + + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKE 211

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKN-----------------------LLNGMPE 201
             ++GN+LT +   LI S   LT L  SKN                        L  +PE
Sbjct: 212 FWMDGNRLTFIPG-LIGSLKQLTYLDVSKNNIDTVEEGISGCESLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           +IG L +L  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 SIGLLKKLTTLKIDENQLMYLPDSIGGLISIEELDCSFNEIEALPSSIGQLSNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N +  LP    K+
Sbjct: 331 HNYLQQLPPEIGFWKHVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRMKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 127/320 (39%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLNGL---------------------------KEFWMDGNRLTFIPGLIGSLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N+I  +   +S C SLQ
Sbjct: 237 VSKNNIDTVEEGISGCESLQ 256



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 25/158 (15%)

Query: 31  NFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNV--------------- 75
           N D   EG    E+  LQ L+L+ N++++L E +  L  LT L +               
Sbjct: 241 NIDTVEEGISGCES--LQDLLLSSNSLQQLPESIGLLKKLTTLKIDENQLMYLPDSIGGL 298

Query: 76  --------SHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLK 127
                   S N++  LP++IG+L  +++     N + ++P EIG    +      SN+L+
Sbjct: 299 ISIEELDCSFNEIEALPSSIGQLSNIRTFAADHNYLQQLPPEIGFWKHVTVLFLHSNKLE 358

Query: 128 ELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            LP  +G    L     S+N + +LP       +++ +
Sbjct: 359 TLPEEMGDMQKLKVINLSDNRMKNLPFSFTKLQQLTAM 396


>gi|348586778|ref|XP_003479145.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Cavia
           porcellus]
          Length = 1557

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 152/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 49  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 96

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP +I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 97  SIPDNDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 156

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 157 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 216

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 217 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 275

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 276 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 335

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 336 LPSTIGYLHSLRTLAVDEN 354



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 183 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 242

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 243 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 302

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 303 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 361

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS
Sbjct: 362 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 421

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 422 DNQSKALIP 430



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 123/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 41  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 78

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L  + IAS   L EL  SKN +   PE I    
Sbjct: 79  QIEELPKQLFNCQALRKLSIPDNDLSSLPTS-IASLVNLKELDISKNGVQEFPENIKCCK 137

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L               
Sbjct: 138 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL--------------- 182

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                  ++L +L+L  N L  LP  + K+  L +L L  N                   
Sbjct: 183 -------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF----------------- 218

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              S LPE            ++     L    +EL ++   L  +P  I +   +  LD+
Sbjct: 219 ---SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLDM 259

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  ++S C +L+
Sbjct: 260 SKNRIETVDMDISGCEALE 278


>gi|194901384|ref|XP_001980232.1| GG17029 [Drosophila erecta]
 gi|190651935|gb|EDV49190.1| GG17029 [Drosophila erecta]
          Length = 873

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 147/298 (49%), Gaps = 4/298 (1%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E D WW  V L  L L+ N +  +   + NL  LTVL +  N L ELP  IG+L  L  L
Sbjct: 223 EEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLMRL 282

Query: 97  DVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +VS N + ++P EI S   L   + S N+  EL   +     L      +N I SLP  +
Sbjct: 283 NVSHNKLSQLPREIYSLPELRHLNISYNEFNELNPDISDLHMLEFLDGGHNNIQSLPGGI 342

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
               +++ L +  N +  L  +L+ +   L ++   +N L  +PE +G L +L  L L  
Sbjct: 343 GFLVRLTALLLPYNHIKELPPDLV-NMRSLQKIDLMQNDLTCLPEDMGLLRKLECLYLQH 401

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALP-AELGKLSKLGTLDLHSNQLKEYCVE-ACQ 274
           N IL +P    G  +L+E +  NN +  +P A    L  L  LDL  N++ E   E    
Sbjct: 402 NDILELP-EFEGNETLSELHASNNFIKTIPKAMCSNLPHLKILDLRDNKITELPDELCLL 460

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
             L+ LD+SNN++S LP  +  +  L  L + GNP++T+R  ++   T  +LK L  R
Sbjct: 461 RNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTSRILKTLHER 518



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 5/191 (2%)

Query: 149 ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +T +P+ +   ++   +  +D   N+L+ L N L     ++TEL+ S N++  +P+ I  
Sbjct: 682 LTEVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQ 741

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            +R+  L+L  N +  +P+      +L E  + NN    +P  + +L  L  L    N +
Sbjct: 742 FTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFQFIPNCVYELQGLEILIASENHI 801

Query: 266 KEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           K   V   Q   RLS LDL NN +  +PP +G +T +  L L GNP R  R  ++   T 
Sbjct: 802 KMLNVSGLQSLPRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTD 861

Query: 324 ALLKYLRSRLP 334
           A++ YLR R+P
Sbjct: 862 AIMSYLRDRIP 872



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 127/307 (41%), Gaps = 39/307 (12%)

Query: 147 NCITSLPEDLADCSKMSKLDVEGN--KLTVLSNNLIASWTMLTELIASKNLLNGMPETIG 204
           N    LPE L D ++        N  +LT+   +   +   L  L  S N L  +   I 
Sbjct: 192 NFQEKLPERLYDINEADADSKAANLEQLTIKEEDAWWNQVPLNNLDLSSNTLTHISPKIE 251

Query: 205 SLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
           +L  L  L LH N ++ +P  I     L    + +N LS LP E+  L +L  L++  N+
Sbjct: 252 NLQSLTVLTLHDNALVELPPEIGKLEKLMRLNVSHNKLSQLPREIYSLPELRHLNISYNE 311

Query: 265 LKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT- 322
             E   +   L  L  LD  +N++  LP  IG +  L  LLL  N ++ L   LVN  + 
Sbjct: 312 FNELNPDISDLHMLEFLDGGHNNIQSLPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSL 371

Query: 323 -------------PALLKYLRS------------RLPENEDSEAST---TKEDLITMATR 354
                        P  +  LR              LPE E +E  +      + I    +
Sbjct: 372 QKIDLMQNDLTCLPEDMGLLRKLECLYLQHNDILELPEFEGNETLSELHASNNFIKTIPK 431

Query: 355 LSVTS----KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA---SLQV 407
              ++    K L L    ++ +P E+     + +LD+S N+I  LP  LSS A   SLQV
Sbjct: 432 AMCSNLPHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQV 491

Query: 408 KFSDLVT 414
           + + + T
Sbjct: 492 EGNPIKT 498


>gi|111307791|gb|AAI21268.1| LOC734027 protein [Xenopus (Silurana) tropicalis]
          Length = 635

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 181/400 (45%), Gaps = 52/400 (13%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  SL+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTSLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  L
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFL 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+N++  LP  IG +  L  L +  
Sbjct: 227 GNLKQLTYLDVSKNNIEMVEDGISGCE-SLQDLLLSSNAIQQLPESIGALKKLTTLKVDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+  G   A+           ED + S  + + +  +    +  +  + +  
Sbjct: 286 NQLMYLPDSI--GGLTAI-----------EDLDCSFNEIEALPSSIGHLIQIRTFAADHN 332

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            L+ +P EI      T L L  N ++ LP E+     L+V
Sbjct: 333 FLTQLPPEIGTWKSATVLFLHSNKLESLPEEMGDMQKLKV 372



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 149/298 (50%), Gaps = 25/298 (8%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLD 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  L +  +++ LDV  N + ++ +  I+    L +L+ S N +  +PE
Sbjct: 212 FWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDG-ISGCESLQDLLLSSNAIQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLH 261
           +IG+L +L  L + +N+++ +P SI G  ++ +     N + ALP+ +G L ++ T    
Sbjct: 271 SIGALKKLTTLKVDENQLMYLPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAAD 330

Query: 262 SNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            N L +   E    +  +VL L +N L  LP E+G M  L+ + L+ N LR L  S  
Sbjct: 331 HNFLTQLPPEIGTWKSATVLFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLPFSFT 388



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 121/247 (48%), Gaps = 2/247 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L + +  L  L  L++  N+ +E+P  + +L  LK   +  N +  I
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYI 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +G+   L   D S N ++ +   +  C +L D   S+N I  LPE +    K++ L 
Sbjct: 223 PGFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLK 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L  L ++ I   T + +L  S N +  +P +IG L ++       N +  +P  I
Sbjct: 283 VDENQLMYLPDS-IGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEI 341

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               S    ++ +N L +LP E+G + KL  ++L  N+L+       +L +L+ + LS+N
Sbjct: 342 GTWKSATVLFLHSNKLESLPEEMGDMQKLKVINLSDNRLRNLPFSFTRLQQLTAMWLSDN 401

Query: 286 SLSGLPP 292
               L P
Sbjct: 402 QSKPLIP 408



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 42/240 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTI 83

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LPA +  L  L  LD+  N ++E+   ++ C++ L++++ S N +S LP    ++  L +
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L                  A L +L    P N                T+L +    L
Sbjct: 143 LYLND----------------AFLDFL----PAN------------FGRLTKLQI----L 166

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG 422
            L    L  +P  +    ++ +LDL  N   E+P  L   + L+  + D   NK + I G
Sbjct: 167 ELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD--GNKLTYIPG 224


>gi|359319033|ref|XP_003638977.1| PREDICTED: protein LAP2-like isoform 2 [Canis lupus familiaris]
          Length = 1302

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 175/402 (43%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                                       V+ +EL     
Sbjct: 286 NQLMYLPDSIGG------------------------------------LVSIEELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 159/344 (46%), Gaps = 50/344 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN---PLRTLRSSLVNGPTPALL-KYLRSRLPENED 338
            L  + L+ N   PL  L+    +     +L  Y+  + P  ED
Sbjct: 392 QLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTED 435


>gi|339247481|ref|XP_003375374.1| putative PDZ domain protein [Trichinella spiralis]
 gi|316971254|gb|EFV55056.1| putative PDZ domain protein [Trichinella spiralis]
          Length = 880

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 156/303 (51%), Gaps = 32/303 (10%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L+ N+I+++ + ++    L  +++S N ++ LP  + +L  L SL ++  S+  
Sbjct: 281 ELEDLDLSKNDIQEIPDSIKQCRNLLYVDLSSNPINRLPECVFQLGRLTSLGLNDISMTN 340

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P +IG  T L   +   N L+ LP+S+ +  NL      +N   +LP ++     + +L
Sbjct: 341 LPTDIGKLTNLEALEARENLLRSLPASIEQLKNLKRLDIGSNEFETLPLEIGQLENLQEL 400

Query: 166 DVEGNKLTVL----------------------SNNLIASW-------TMLTELIASKNLL 196
            V+ N L  L                      S N I S+         L++L AS+N +
Sbjct: 401 YVDCNDLECLPKVHSLIHCCSFIYLFLQSLDVSENKILSFPDDLGELVSLSDLTASQNCV 460

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +P +IG L +L  L + +NR++++  +I  C SL E  +  N L+ LP+ LG L KL 
Sbjct: 461 EVLPHSIGRLKKLTILKIDKNRLVALTPAIGSCASLCELVLTENLLTELPSSLGNLKKLT 520

Query: 257 TLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             ++  N+L E    + +C   L+VL L NN LS LP EIGK+  LR L ++GN LR+L 
Sbjct: 521 VFNVDRNRLSELPSTIGSCS-NLTVLSLRNNLLSILPFEIGKLQQLRVLDVSGNRLRSLP 579

Query: 315 SSL 317
            +L
Sbjct: 580 YTL 582



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 187/438 (42%), Gaps = 87/438 (19%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL L++ S+ ++P ++ K               +L+ L    N +  L   +  L  L  
Sbjct: 330 SLGLNDISMTNLPTDIGK-------------LTNLEALEARENLLRSLPASIEQLKNLKR 376

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF--------DCSSN 124
           L++  N+   LP  IG+L  L+ L V  N +  +P ++ S      F        D S N
Sbjct: 377 LDIGSNEFETLPLEIGQLENLQELYVDCNDLECLP-KVHSLIHCCSFIYLFLQSLDVSEN 435

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           ++   P  LG  ++LSD  AS NC+  LP  +    K++ L ++ N+L  L+   I S  
Sbjct: 436 KILSFPDDLGELVSLSDLTASQNCVEVLPHSIGRLKKLTILKIDKNRLVALTP-AIGSCA 494

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L EL+ ++NLL  +P ++G+L +L   ++ +NR+  +PS+I  C +L    + NN LS 
Sbjct: 495 SLCELVLTENLLTELPSSLGNLKKLTVFNVDRNRLSELPSTIGSCSNLTVLSLRNNLLSI 554

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           LP E+GKL                     QLR  VLD+S N L  LP  +  ++ L+ + 
Sbjct: 555 LPFEIGKLQ--------------------QLR--VLDVSGNRLRSLPYTLNALSNLQAIW 592

Query: 305 LTGNPLRTL---------RSSLVNGPTPALLKYLRSRLPE------NEDSEASTTKEDLI 349
           L+ N L  L          +  V GP        +   P+      +ED EA    E   
Sbjct: 593 LSDNQLYLLGDTKGETVVENGFVGGP--------KVHFPDVDGDSVDEDDEAIGKFERHD 644

Query: 350 TMATRLSVTSKELSLEGMNLSAIPSE---------IWEAGEITK-------LDLSRNSIQ 393
           T   +    +K   ++G     IP +          +  G+  +       ++  R S+ 
Sbjct: 645 TPHPKHPTKAKGRQIDG---HVIPHDGNHKPGKDATFRVGDGRRKSAGEDSVEDGRTSVA 701

Query: 394 ELPPELSSCASLQVKFSD 411
             P E   C+ +Q   SD
Sbjct: 702 RSPTEKQPCSEVQSPASD 719



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 113/383 (29%), Positives = 174/383 (45%), Gaps = 55/383 (14%)

Query: 61  KEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFD 120
           +E +R    L VL +  N + E+   +  LH L+ L +S N I K+P +I + + L   D
Sbjct: 227 EEVVRYTRSLEVLLLDSNHIKEISKHVFRLHKLRRLALSDNEIYKVPADISNLSELEDLD 286

Query: 121 CSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLI 180
            S N ++E+P S+ +C NL     S+N I  LPE +    +++ L +    +T L  + I
Sbjct: 287 LSKNDIQEIPDSIKQCRNLLYVDLSSNPINRLPECVFQLGRLTSLGLNDISMTNLPTD-I 345

Query: 181 ASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP----------------- 223
              T L  L A +NLL  +P +I  L  L RLD+  N   ++P                 
Sbjct: 346 GKLTNLEALEARENLLRSLPASIEQLKNLKRLDIGSNEFETLPLEIGQLENLQELYVDCN 405

Query: 224 --------SSISGCCSLAEFYM-----GNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
                    S+  CCS    ++       N + + P +LG+L  L  L    N     CV
Sbjct: 406 DLECLPKVHSLIHCCSFIYLFLQSLDVSENKILSFPDDLGELVSLSDLTASQN-----CV 460

Query: 271 EACQL------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPA 324
           E          +L++L +  N L  L P IG   +L +L+LT N L  L SSL N     
Sbjct: 461 EVLPHSIGRLKKLTILKIDKNRLVALTPAIGSCASLCELVLTENLLTELPSSLGNLKKLT 520

Query: 325 LLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITK 384
           +    R+RL     SE  +T    I   + L+V    LSL    LS +P EI +  ++  
Sbjct: 521 VFNVDRNRL-----SELPST----IGSCSNLTV----LSLRNNLLSILPFEIGKLQQLRV 567

Query: 385 LDLSRNSIQELPPELSSCASLQV 407
           LD+S N ++ LP  L++ ++LQ 
Sbjct: 568 LDVSGNRLRSLPYTLNALSNLQA 590



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 1/154 (0%)

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD     L  +   ++     L  L+   N +  + + +  L +L RL L  N I  +P+
Sbjct: 215 LDKRQCNLNHVPEEVVRYTRSLEVLLLDSNHIKEISKHVFRLHKLRRLALSDNEIYKVPA 274

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            IS    L +  +  N +  +P  + +   L  +DL SN +        QL RL+ L L+
Sbjct: 275 DISNLSELEDLDLSKNDIQEIPDSIKQCRNLLYVDLSSNPINRLPECVFQLGRLTSLGLN 334

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           + S++ LP +IGK+T L  L    N LR+L +S+
Sbjct: 335 DISMTNLPTDIGKLTNLEALEARENLLRSLPASI 368


>gi|391336550|ref|XP_003742642.1| PREDICTED: LOW QUALITY PROTEIN: protein lap4-like [Metaseiulus
           occidentalis]
          Length = 1488

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 157/296 (53%), Gaps = 25/296 (8%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHN-----------------------KLSEL 83
           LQ+L L+ N+I  + E LR+L  L +L++S N                        L+ L
Sbjct: 85  LQELDLSKNDISDIPEGLRHLRNLQLLDLSQNCLYRTPDFLVDLKNLNALYLNDVALAAL 144

Query: 84  PAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFK 143
           P A G L  L  L++  NS+  +PD  G    L + D  SN+++EL   +GR  +L +  
Sbjct: 145 PVAFGMLSSLTILELRDNSLKNLPDSFGQLKHLERLDLGSNEIEELSPVIGRLESLEELW 204

Query: 144 ASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI 203
              N ++ LP D+   S++  LDV  ++L  L N  I   + L++L+ S+NLL  +P+ I
Sbjct: 205 LDCNPLSRLPGDIGKLSRLKCLDVSESRLEALPNE-ICQLSSLSDLLLSQNLLTKLPKDI 263

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           G L  L  L + QN I  IP S+  C SL E  + +N L+ +P ++G L+KL  L++  N
Sbjct: 264 GKLRTLTILKVDQNHISHIPDSLGYCESLQELILTDNELTQVPPDIGNLTKLTNLNIDRN 323

Query: 264 QLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            L+    +  +L +L++L L  N LS LP EIG +++L  + ++GN L+ L  S+ 
Sbjct: 324 LLQRLPPDIGKLEKLTMLSLRENRLSELPLEIGNLSSLHVMDISGNRLKNLPISMA 379



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 185/364 (50%), Gaps = 19/364 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           ++++  +H+N+  + E++     L  L ++ N + ELP  +  L  L+    S N I +I
Sbjct: 16  VERVDRSHSNLVAVPEEIGRYRSLEQLALNSNHIKELPKHLFRLQKLRVFTASDNEIQEI 75

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P +IG+   L + D S N + ++P  L    NL     S NC+   P+ L D   ++ L 
Sbjct: 76  PQDIGAWQLLQELDLSKNDISDIPEGLRHLRNLQLLDLSQNCLYRTPDFLVDLKNLNALY 135

Query: 167 VEGNKLTVL--SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           +    L  L  +  +++S T+L EL    N L  +P++ G L  L RLDL  N I  +  
Sbjct: 136 LNDVALAALPVAFGMLSSLTIL-EL--RDNSLKNLPDSFGQLKHLERLDLGSNEIEELSP 192

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ-LRLSVLDLS 283
            I    SL E ++  N LS LP ++GKLS+L  LD+  ++L+    E CQ   LS L LS
Sbjct: 193 VIGRLESLEELWLDCNPLSRLPGDIGKLSRLKCLDVSESRLEALPNEICQLSSLSDLLLS 252

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
            N L+ LP +IGK+ TL  L +  N +  +  SL  G   +L + + +      D+E + 
Sbjct: 253 QNLLTKLPKDIGKLRTLTILKVDQNHISHIPDSL--GYCESLQELILT------DNELTQ 304

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
              D+  + T+L+     L+++   L  +P +I +  ++T L L  N + ELP E+ + +
Sbjct: 305 VPPDIGNL-TKLT----NLNIDRNLLQRLPPDIGKLEKLTMLSLRENRLSELPLEIGNLS 359

Query: 404 SLQV 407
           SL V
Sbjct: 360 SLHV 363



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 120/247 (48%), Gaps = 24/247 (9%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + +   L++L L  N IE+L   +  L  L  L +  N LS LP  IG+L  LK LDV
Sbjct: 169 DSFGQLKHLERLDLGSNEIEELSPVIGRLESLEELWLDCNPLSRLPGDIGKLSRLKCLDV 228

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
           S + +  +P+EI   ++L     S N L +LP  +G+   L+  K   N I+ +P+ L  
Sbjct: 229 SESRLEALPNEICQLSSLSDLLLSQNLLTKLPKDIGKLRTLTILKVDQNHISHIPDSLGY 288

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
           C  + +L +  N+LT +  + I + T LT L   +NLL  +P  IG L +L  L L +NR
Sbjct: 289 CESLQELILTDNELTQVPPD-IGNLTKLTNLNIDRNLLQRLPPDIGKLEKLTMLSLRENR 347

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLS 278
                                  LS LP E+G LS L  +D+  N+LK   +    LRL 
Sbjct: 348 -----------------------LSELPLEIGNLSSLHVMDISGNRLKNLPISMASLRLK 384

Query: 279 VLDLSNN 285
            L L+ N
Sbjct: 385 ALWLAEN 391



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 16/205 (7%)

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           GS  R+ R+D   + ++++P  I    SL +  + +N +  LP  L +L KL       N
Sbjct: 11  GSNRRVERVDRSHSNLVAVPEEIGRYRSLEQLALNSNHIKELPKHLFRLQKLRVFTASDN 70

Query: 264 QLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGP 321
           +++E    + A QL L  LDLS N +S +P  +  +  L+ L L+ N L      LV+  
Sbjct: 71  EIQEIPQDIGAWQL-LQELDLSKNDISDIPEGLRHLRNLQLLDLSQNCLYRTPDFLVD-- 127

Query: 322 TPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGE 381
               LK L + L  N+ + A+        M + L++    L L   +L  +P    +   
Sbjct: 128 ----LKNLNA-LYLNDVALAALPV--AFGMLSSLTI----LELRDNSLKNLPDSFGQLKH 176

Query: 382 ITKLDLSRNSIQELPPELSSCASLQ 406
           + +LDL  N I+EL P +    SL+
Sbjct: 177 LERLDLGSNEIEELSPVIGRLESLE 201


>gi|148921661|gb|AAI46714.1| Zgc:152984 protein [Danio rerio]
          Length = 636

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 148/323 (45%), Gaps = 37/323 (11%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++            +E   L++L L  N IE+L + L N  L
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFS-----------YEKT-LEELYLDANQIEELPKQLFNCQL 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE- 128
           L  L++  N L+ LP  I  L  L+ LDVS N I + P+ I +   L   + S N + + 
Sbjct: 71  LYRLSLPDNDLTVLPPGIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKL 130

Query: 129 ----------------------LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
                                 LP+S GR   L   +   N +  LP+ +   +++ +LD
Sbjct: 131 PEGFTQLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHKLTQLERLD 190

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+ T +   ++   T + EL    N L  +P  IG+L +L  LD+ +N +  +   I
Sbjct: 191 LGSNEFTEVP-EVLEQLTGIRELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVEMVEEQI 249

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
           SGC +L +  + NNAL+ LP  +G L KL TL +  NQL         L  L  LD S N
Sbjct: 250 SGCENLQDLLLSNNALTQLPGSIGSLKKLSTLKVDDNQLMYLPDTIGGLSHLDELDCSFN 309

Query: 286 SLSGLPPEIGKMTTLRKLLLTGN 308
            +  LP  IG+   LR      N
Sbjct: 310 EIEALPSSIGQCVNLRTFAADHN 332



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 25/263 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L + +  L  L  L++  N+ +E+P  + +L  ++ L +  N +  +
Sbjct: 163 LQILELRENQLKMLPKSMHKLTQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTFV 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG+   L   D S N ++ +   +  C NL D   SNN +T LP  +    K+S L 
Sbjct: 223 PGMIGALKQLSYLDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGSLKKLSTLK 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L  L                        P+TIG LS L  LD   N I ++PSSI
Sbjct: 283 VDDNQLMYL------------------------PDTIGGLSHLDELDCSFNEIEALPSSI 318

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
             C +L  F   +N L+ +P E+G L  +  L LHSN+L+    E   + +L V++LS+N
Sbjct: 319 GQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLENLPEEMGDMQKLKVINLSDN 378

Query: 286 SLSGLPPEIGKMTTLRKLLLTGN 308
            L  LP    K+  +  + L+ N
Sbjct: 379 KLRNLPYSFTKLNQMTAMWLSEN 401



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 4/146 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L+L++N + +L   + +L  L+ L V  N+L  LP  IG L  L  LD SFN I  
Sbjct: 254 NLQDLLLSNNALTQLPGSIGSLKKLSTLKVDDNQLMYLPDTIGGLSHLDELDCSFNEIEA 313

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG    L  F    N L ++P  +G   N++     +N + +LPE++ D  K+  +
Sbjct: 314 LPSSIGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLENLPEEMGDMQKLKVI 373

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIA 191
           ++  NKL     NL  S+T L ++ A
Sbjct: 374 NLSDNKL----RNLPYSFTKLNQMTA 395



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 79/319 (24%), Positives = 127/319 (39%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE   + +LD S  S+ ++P EI S                          L +     N
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFSYEK----------------------TLEELYLDAN 56

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + +L +  N LTVL    IA+   L EL  SKN +   PE I +  
Sbjct: 57  QIEELPKQLFNCQLLYRLSLPDNDLTVLPPG-IANLINLRELDVSKNGIQEFPENIKNCK 115

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   SL++ Y+ +  L  LPA  G+L+KL            
Sbjct: 116 VLAIVEASVNPISKLPEGFTQLLSLSQLYLNDAFLEFLPASFGRLTKL------------ 163

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                      +L+L  N L  LP  + K+T L +L L  N                   
Sbjct: 164 ----------QILELRENQLKMLPKSMHKLTQLERLDLGSN------------------- 194

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                    E +E     E L  +        +EL ++G  L+ +P  I    +++ LD+
Sbjct: 195 ---------EFTEVPEVLEQLTGI--------RELWMDGNKLTFVPGMIGALKQLSYLDV 237

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N+++ +  ++S C +LQ
Sbjct: 238 SKNNVEMVEEQISGCENLQ 256


>gi|358331524|dbj|GAA50326.1| leucine-rich repeat protein soc-2 homolog [Clonorchis sinensis]
          Length = 451

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 176/384 (45%), Gaps = 42/384 (10%)

Query: 47  LQKLILAHNNIEKLKE--DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           LQ+L+L +N +  +     L+ L +L +   S+N    LP  +G+L  L+ LD S N I 
Sbjct: 31  LQQLLLTYNKLNDISGVGTLKELQILVI--KSNNLQGPLPDDLGQLTKLQILDCSNNRIT 88

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +PD I S T L++     N + ELPSS+G    L       N +T LP +LA C ++++
Sbjct: 89  TVPDAIASCTKLMRLLLDYNCIGELPSSIGSLKELQQLGIKYNRLTRLPTELAQCQQLTE 148

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE-TIGSL----------------- 206
           L+VEGN++  L ++L+     L     S+N  +G P   IG L                 
Sbjct: 149 LNVEGNQIVRLPDDLLCKMPSLRSATLSRNAFSGFPTGAIGQLVHLEHLSMDYNNLDTVS 208

Query: 207 -------SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLD 259
                   RL  L L  N I+ +  + S    L +  +  N ++ LP +  +L+ L  LD
Sbjct: 209 TKDFVDADRLRSLSLGNNNIVHLEIAASQWRQLVQLDLSYNRITKLPEDFCELANLEDLD 268

Query: 260 LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL----R 314
           L SN LKE  V   +L RL  L+L  N ++ LP  IG++  LR L L  N L  L     
Sbjct: 269 LTSNWLKELPVSIGKLTRLVKLNLEFNHITYLPKSIGELENLRVLNLDANCLTRLPCAIG 328

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTK------EDLITMATRLSVTS--KELSLEG 366
           S+L N  +  L   +  RLP         T+      + L  +   L+       LSLEG
Sbjct: 329 SNLHNLTSLKLEDNMIQRLPTQIGDLKQLTRLCLRNNKPLDQLPVELAALPLLSFLSLEG 388

Query: 367 MNLSAIPSEIWEAGEITKLDLSRN 390
            NL  IP +I +AG    +   RN
Sbjct: 389 CNLRRIPEDIVQAGAGAVIKYLRN 412



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 27/248 (10%)

Query: 29  YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
           Y N D     D + +A  L+ L L +NNI  L+        L  L++S+N++++LP    
Sbjct: 201 YNNLDTVSTKD-FVDADRLRSLSLGNNNIVHLEIAASQWRQLVQLDLSYNRITKLPEDFC 259

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           EL  L+ LD++ N + ++P  IG  T LVK +   N +  LP S+G   NL       NC
Sbjct: 260 ELANLEDLDLTSNWLKELPVSIGKLTRLVKLNLEFNHITYLPKSIGELENLRVLNLDANC 319

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T LP     C+  S L                    LT L    N++  +P  IG L +
Sbjct: 320 LTRLP-----CAIGSNLH------------------NLTSLKLEDNMIQRLPTQIGDLKQ 356

Query: 209 LIRLDLHQNRIL-SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL-- 265
           L RL L  N+ L  +P  ++    L+   +    L  +P ++ +      +    N L  
Sbjct: 357 LTRLCLRNNKPLDQLPVELAALPLLSFLSLEGCNLRRIPEDIVQAGAGAVIKYLRNILLV 416

Query: 266 KEYCVEAC 273
            E C  AC
Sbjct: 417 SEQCKLAC 424



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 133/280 (47%), Gaps = 25/280 (8%)

Query: 135 RCLNLSDFKASNNCIT-SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL---- 189
           RC  L+     +N +  +LP  +     + +L +  NKL     N I+    L EL    
Sbjct: 3   RCAYLTHLDLRHNRLDGALPSVILGLHCLQQLLLTYNKL-----NDISGVGTLKELQILV 57

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
           I S NL   +P+ +G L++L  LD   NRI ++P +I+ C  L    +  N +  LP+ +
Sbjct: 58  IKSNNLQGPLPDDLGQLTKLQILDCSNNRITTVPDAIASCTKLMRLLLDYNCIGELPSSI 117

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEI-GKMTTLRKLLLTG 307
           G L +L  L +  N+L     E  Q + L+ L++  N +  LP ++  KM +LR   L+ 
Sbjct: 118 GSLKELQQLGIKYNRLTRLPTELAQCQQLTELNVEGNQIVRLPDDLLCKMPSLRSATLS- 176

Query: 308 NPLRTLRSSLVNGPTPALLKYLR-SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
                 R++    PT A+ + +    L  + ++  + + +D +  A RL    + LSL  
Sbjct: 177 ------RNAFSGFPTGAIGQLVHLEHLSMDYNNLDTVSTKDFVD-ADRL----RSLSLGN 225

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            N+  +     +  ++ +LDLS N I +LP +    A+L+
Sbjct: 226 NNIVHLEIAASQWRQLVQLDLSYNRITKLPEDFCELANLE 265


>gi|426215730|ref|XP_004002122.1| PREDICTED: leucine-rich repeat-containing protein 7 [Ovis aries]
          Length = 1537

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 151/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALKKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 195 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 314 LPSTIGYLHSLRTLAVDEN 332



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 130/247 (52%), Gaps = 2/247 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++  +
Sbjct: 163 LRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVL 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ L 
Sbjct: 223 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P  I
Sbjct: 283 VDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREI 341

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
             C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS+N
Sbjct: 342 GSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDN 401

Query: 286 SLSGLPP 292
               L P
Sbjct: 402 QSKALIP 408



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 122/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 19  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 56

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 57  QIEELPKQLFNCQALKKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 115

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L+KL            
Sbjct: 116 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKL------------ 163

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                      +L+L  N L  LP  + K+  L +L L  N                   
Sbjct: 164 ----------RILELRENHLKTLPKSMHKLAQLERLDLGNNEF----------------- 196

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              S LPE            ++     L    +EL ++   L  +P  I +   +  LD+
Sbjct: 197 ---SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  ++S C +L+
Sbjct: 238 SKNRIETVDMDISGCEALE 256


>gi|38344325|emb|CAE02151.2| OSJNBa0058K23.7 [Oryza sativa Japonica Group]
          Length = 1174

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 127/382 (33%), Positives = 188/382 (49%), Gaps = 24/382 (6%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           LQ+L L  N +   +   L NL  LT+L +S N LS  LPA+IG L  L+ L V  NS+ 
Sbjct: 331 LQRLSLHANRLAGTVPASLTNLVNLTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLS 390

Query: 105 -KIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCSK 161
            +IP  I + T L     S N     LP+ LGR  +L       N +   +P+DL DC +
Sbjct: 391 GQIPASISNCTQLANASMSFNLFSGPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQ 450

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 220
           + KLD+  N  T   + L+     LT L    N L+G +PE IG++++LI L L +NR  
Sbjct: 451 LQKLDLSENSFTGGLSRLVGQLGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFA 510

Query: 221 S-IPSSISGCCSLAEFYMGNNAL-SALPAELGKLSKLGTLDLHSNQLKEYCVEA-CQLR- 276
             +P+SIS   SL    +G+N L    PAE+ +L +L  L   SN+      +A   LR 
Sbjct: 511 GHVPASISNMSSLQLLDLGHNRLDGVFPAEVFELRQLTILGAGSNRFAGPIPDAVANLRS 570

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           LS LDLS+N L+G +P  +G++  L  L L+ N L       V      +  YL   L  
Sbjct: 571 LSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRLAGAIPGAVIASMSNVQMYL--NLSN 628

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-E 394
           N  + A   +   + M   + +++ +LS        +P+ +     +  LDLS NS+  E
Sbjct: 629 NAFTGAIPAEIGGLVMVQTIDLSNNQLS------GGVPATLAGCKNLYSLDLSGNSLTGE 682

Query: 395 LP----PELSSCASLQVKFSDL 412
           LP    P+L    +L +  +DL
Sbjct: 683 LPANLFPQLDLLTTLNISGNDL 704



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 179/411 (43%), Gaps = 72/411 (17%)

Query: 46  DLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           +L++L+++ N     +   L N   +  L ++ N L+  +P+ IG+L  L+  +   N++
Sbjct: 138 ELEQLVVSSNYFAGGIPSSLCNCSAMWALALNVNNLTGAIPSCIGDLSNLEIFEAYLNNL 197

Query: 104 -MKIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
             ++P  +     ++  D S NQL   +P  +G   NL   +   N  +  +P +L  C 
Sbjct: 198 DGELPPSMAKLKGIMVVDLSCNQLSGSIPPEIGDLSNLQILQLYENRFSGHIPRELGRCK 257

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            ++ L++  N  T                         +P  +G L+ L  + L++N + 
Sbjct: 258 NLTLLNIFSNGFT-----------------------GEIPGELGELTNLEVMRLYKNALT 294

Query: 221 S-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LR 276
           S IP S+  C SL    +  N L+  +P ELG+L  L  L LH+N+L      +    + 
Sbjct: 295 SEIPRSLRRCVSLLNLDLSMNQLAGPIPPELGELPSLQRLSLHANRLAGTVPASLTNLVN 354

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR----------------TLRSSLVN 319
           L++L+LS N LSG LP  IG +  LR+L++  N L                 ++  +L +
Sbjct: 355 LTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLSGQIPASISNCTQLANASMSFNLFS 414

Query: 320 GPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKE---------------- 361
           GP PA L  L+S   L   ++S A    +DL        +   E                
Sbjct: 415 GPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQLQKLDLSENSFTGGLSRLVGQLGN 474

Query: 362 ---LSLEGMNLSA-IPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQV 407
              L L+G  LS  IP EI    ++  L L RN     +P  +S+ +SLQ+
Sbjct: 475 LTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFAGHVPASISNMSSLQL 525



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 123/289 (42%), Gaps = 20/289 (6%)

Query: 38  GDKWWEAVDLQKLI---LAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHM 92
           G+   E  ++ KLI   L  N     +   + N+  L +L++ HN+L    PA + EL  
Sbjct: 487 GEIPEEIGNMTKLISLKLGRNRFAGHVPASISNMSSLQLLDLGHNRLDGVFPAEVFELRQ 546

Query: 93  LKSLDVSFNSIMK-IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT 150
           L  L    N     IPD + +  +L   D SSN L   +P++LGR   L     S+N + 
Sbjct: 547 LTILGAGSNRFAGPIPDAVANLRSLSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRLA 606

Query: 151 -SLPEDLADCSKMSK----LDVEGNKLTVLSNNLIASWTMLTELIASKNLL-NGMPETIG 204
            ++P   A  + MS     L++  N  T      I    M+  +  S N L  G+P T+ 
Sbjct: 607 GAIPG--AVIASMSNVQMYLNLSNNAFTGAIPAEIGGLVMVQTIDLSNNQLSGGVPATLA 664

Query: 205 SLSRLIRLDLHQNRILS-IPSSISGCCSLAEF--YMGNNALSALPAELGKLSKLGTLDLH 261
               L  LDL  N +   +P+++     L       GN+    +PA++  L  + TLD+ 
Sbjct: 665 GCKNLYSLDLSGNSLTGELPANLFPQLDLLTTLNISGNDLDGEIPADIAALKHIQTLDVS 724

Query: 262 SNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            N        A      L  L+LS+N+  G  P+ G    L    L GN
Sbjct: 725 RNAFAGAIPPALANLTALRSLNLSSNTFEGPVPDGGVFRNLTMSSLQGN 773


>gi|403265578|ref|XP_003925006.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Saimiri boliviensis boliviensis]
          Length = 560

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 190/409 (46%), Gaps = 42/409 (10%)

Query: 4   ILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKED 63
           ++   R    L L    L+++P  + KN               L+ L L  N+++ L ++
Sbjct: 113 VVSFLRALRELRLYQTDLKEIPIIICKNLHH------------LELLGLTGNHLKCLPKE 160

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           + N   L  + +  N+    P  +  L+ L+ +D+  N I  IP+EIG    L KF  +S
Sbjct: 161 IVNQTKLREIYLKQNQFEVFPQELCVLYNLEIIDLDENKIGAIPEEIGHLMRLQKFFVAS 220

Query: 124 NQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASW 183
           N L  LP+SL +C  LS    S+N + S+P  LA+  +M+++ + GN+L  +   LI  W
Sbjct: 221 NNLPVLPASLCQCSQLSVLDLSHNLLHSIPNSLAELGEMTEIGLSGNRLEKVP-RLICRW 279

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIR---LDLHQNRILSIPSSISGCCSLAEFYMGNN 240
           T L  L+  +N   G+    GS  RL+    LDL QN +   P  I    +L    + +N
Sbjct: 280 TSL-HLLYLRN--TGLHRLRGSFRRLVNLRCLDLSQNYLDHCPPQICALENLEVLALDDN 336

Query: 241 ALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGK 296
            +  LP+ELG LSKL  L L  N+   +  E   L    +L +     + L+ +P +IGK
Sbjct: 337 KIWQLPSELGSLSKLKILGLTGNEFLSFPEEVLSLESLEKLYIGQDQGSKLTYVPEDIGK 396

Query: 297 MTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE--DLITMATR 354
           + +L++L +  N L  L  SL + P   +L           D   +  K+  D I  A  
Sbjct: 397 LQSLKELYIENNHLEYLPMSLGSMPNLEVL-----------DCRHNLLKQLPDAICQAQA 445

Query: 355 LSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
           L    +EL LE   L+ +P  +     I  L L  N ++E P E+  CA
Sbjct: 446 L----QELLLEDNLLTHLPENLDSLVNIKVLTLMDNPMEEPPKEV--CA 488



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 13/339 (3%)

Query: 70  LTVLNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           L  L +    L E+P  I + LH L+ L ++ N +  +P EI + T L +     NQ + 
Sbjct: 120 LRELRLYQTDLKEIPIIICKNLHHLELLGLTGNHLKCLPKEIVNQTKLREIYLKQNQFEV 179

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
            P  L    NL       N I ++PE++    ++ K  V  N L VL  +L    + L+ 
Sbjct: 180 FPQELCVLYNLEIIDLDENKIGAIPEEIGHLMRLQKFFVASNNLPVLPASL-CQCSQLSV 238

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S NLL+ +P ++  L  +  + L  NR+  +P  I    SL   Y+ N  L  L   
Sbjct: 239 LDLSHNLLHSIPNSLAELGEMTEIGLSGNRLEKVPRLICRWTSLHLLYLRNTGLHRLRGS 298

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
             +L  L  LDL  N L     + C L  L VL L +N +  LP E+G ++ L+ L LTG
Sbjct: 299 FRRLVNLRCLDLSQNYLDHCPPQICALENLEVLALDDNKIWQLPSELGSLSKLKILGLTG 358

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N   +    ++     +L    +  + +++ S+ +   ED+  + +      KEL +E  
Sbjct: 359 NEFLSFPEEVL-----SLESLEKLYIGQDQGSKLTYVPEDIGKLQS-----LKELYIENN 408

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +L  +P  +     +  LD   N +++LP  +    +LQ
Sbjct: 409 HLEYLPMSLGSMPNLEVLDCRHNLLKQLPDAICQAQALQ 447



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 134/294 (45%), Gaps = 5/294 (1%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQK  +A NN+  L   L     L+VL++SHN L  +P ++ EL  +  + +S N + K+
Sbjct: 213 LQKFFVASNNLPVLPASLCQCSQLSVLDLSHNLLHSIPNSLAELGEMTEIGLSGNRLEKV 272

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  I   T+L      +  L  L  S  R +NL     S N +   P  +     +  L 
Sbjct: 273 PRLICRWTSLHLLYLRNTGLHRLRGSFRRLVNLRCLDLSQNYLDHCPPQICALENLEVLA 332

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN---RILSIP 223
           ++ NK+  L + L  S + L  L  + N     PE + SL  L +L + Q+   ++  +P
Sbjct: 333 LDDNKIWQLPSEL-GSLSKLKILGLTGNEFLSFPEEVLSLESLEKLYIGQDQGSKLTYVP 391

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDL 282
             I    SL E Y+ NN L  LP  LG +  L  LD   N LK+     CQ + L  L L
Sbjct: 392 EDIGKLQSLKELYIENNHLEYLPMSLGSMPNLEVLDCRHNLLKQLPDAICQAQALQELLL 451

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN 336
            +N L+ LP  +  +  ++ L L  NP+      +      A+ +YL+ +   N
Sbjct: 452 EDNLLTHLPENLDSLVNIKVLTLMDNPMEEPPKEVCAEGNEAIWQYLKEKRKRN 505



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 128/316 (40%), Gaps = 61/316 (19%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           ++ S  S+  IP EI + T L +    +NQ++E+P  + R  N+       N + SL   
Sbjct: 30  INASNQSLTAIPLEIFAFTELEEVHLENNQIEEIPQEIQRLKNIRVLYLDKNNLRSLCPA 89

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           L   S +  LD+  N                   I S +LL      +  L  L  L L+
Sbjct: 90  LGQLSSLESLDLSYNP------------------IFSSSLL-----VVSFLRALRELRLY 126

Query: 216 QNRILSIPSSISGCCSLAEFY-MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           Q  +  IP  I       E   +  N L  LP E+   +KL  + L  NQ + +  E C 
Sbjct: 127 QTDLKEIPIIICKNLHHLELLGLTGNHLKCLPKEIVNQTKLREIYLKQNQFEVFPQELCV 186

Query: 275 LR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRL 333
           L  L ++DL  N +  +P EIG +  L+K  +  N L  L +SL                
Sbjct: 187 LYNLEIIDLDENKIGAIPEEIGHLMRLQKFFVASNNLPVLPASLCQ-------------- 232

Query: 334 PENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ 393
                              ++LSV    L L    L +IP+ + E GE+T++ LS N ++
Sbjct: 233 ------------------CSQLSV----LDLSHNLLHSIPNSLAELGEMTEIGLSGNRLE 270

Query: 394 ELPPELSSCASLQVKF 409
           ++P  +    SL + +
Sbjct: 271 KVPRLICRWTSLHLLY 286


>gi|301780908|ref|XP_002925871.1| PREDICTED: leucine-rich repeat-containing protein 7-like
           [Ailuropoda melanoleuca]
          Length = 1545

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 151/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 35  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 82

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 83  SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 142

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 143 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 202

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 203 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 261

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 262 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 321

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 322 LPSTIGYLHSLRTLAVDEN 340



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 169 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 228

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 229 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 288

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 289 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 347

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS
Sbjct: 348 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 407

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 408 DNQSKALIP 416



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 122/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 27  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 64

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 65  QIEELPKQLFNCQALRKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 123

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L               
Sbjct: 124 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL--------------- 168

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                  ++L +L+L  N L  LP  + K+  L +L L  N                   
Sbjct: 169 -------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF----------------- 204

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              S LPE            ++     L    +EL ++   L  +P  I +   +  LD+
Sbjct: 205 ---SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLDM 245

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  ++S C +L+
Sbjct: 246 SKNRIETVDMDISGCEALE 264


>gi|355686423|gb|AER98051.1| erbb2 interacting protein [Mustela putorius furo]
          Length = 1093

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 175/402 (43%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 4   TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 51

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 52  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 111

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 112 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 157

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 158 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 207

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 208 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 266

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                                       V+ +EL     
Sbjct: 267 NQLMYLPDSIGG------------------------------------LVSIEELDCSFN 290

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS + +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 291 EVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLF 332



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 159/344 (46%), Gaps = 50/344 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 73  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 132

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 133 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 192

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 193 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 252

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 253 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSVGQLTNIRTFAADH 312

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 313 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 372

Query: 299 TLRKLLLTGN---PLRTLRSSLVNGPTPALL-KYLRSRLPENED 338
            L  + L+ N   PL  L+    +     +L  Y+  + P  ED
Sbjct: 373 QLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTED 416


>gi|125591656|gb|EAZ32006.1| hypothetical protein OsJ_16186 [Oryza sativa Japonica Group]
          Length = 1174

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 127/382 (33%), Positives = 188/382 (49%), Gaps = 24/382 (6%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSIM 104
           LQ+L L  N +   +   L NL  LT+L +S N LS  LPA+IG L  L+ L V  NS+ 
Sbjct: 331 LQRLSLHANRLAGTVPASLTNLVNLTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLS 390

Query: 105 -KIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCSK 161
            +IP  I + T L     S N     LP+ LGR  +L       N +   +P+DL DC +
Sbjct: 391 GQIPASISNCTQLANASMSFNLFSGPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQ 450

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 220
           + KLD+  N  T   + L+     LT L    N L+G +PE IG++++LI L L +NR  
Sbjct: 451 LQKLDLSENSFTGGLSRLVGQLGNLTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFA 510

Query: 221 S-IPSSISGCCSLAEFYMGNNAL-SALPAELGKLSKLGTLDLHSNQLKEYCVEA-CQLR- 276
             +P+SIS   SL    +G+N L    PAE+ +L +L  L   SN+      +A   LR 
Sbjct: 511 GHVPASISNMSSLQLLDLGHNRLDGVFPAEVFELRQLTILGAGSNRFAGPIPDAVANLRS 570

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           LS LDLS+N L+G +P  +G++  L  L L+ N L       V      +  YL   L  
Sbjct: 571 LSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRLAGAIPGAVIASMSNVQMYL--NLSN 628

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-E 394
           N  + A   +   + M   + +++ +LS        +P+ +     +  LDLS NS+  E
Sbjct: 629 NAFTGAIPAEIGGLVMVQTIDLSNNQLS------GGVPATLAGCKNLYSLDLSGNSLTGE 682

Query: 395 LP----PELSSCASLQVKFSDL 412
           LP    P+L    +L +  +DL
Sbjct: 683 LPANLFPQLDLLTTLNISGNDL 704



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 179/411 (43%), Gaps = 72/411 (17%)

Query: 46  DLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           +L++L+++ N     +   L N   +  L ++ N L+  +P+ IG+L  L+  +   N++
Sbjct: 138 ELEQLVVSSNYFAGGIPSSLCNCSAMWALALNVNNLTGAIPSCIGDLSNLEIFEAYLNNL 197

Query: 104 -MKIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
             ++P  +     ++  D S NQL   +P  +G   NL   +   N  +  +P +L  C 
Sbjct: 198 DGELPPSMAKLKGIMVVDLSCNQLSGSIPPEIGDLSNLQILQLYENRFSGHIPRELGRCK 257

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            ++ L++  N  T                         +P  +G L+ L  + L++N + 
Sbjct: 258 NLTLLNIFSNGFT-----------------------GEIPGELGELTNLEVMRLYKNALT 294

Query: 221 S-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LR 276
           S IP S+  C SL    +  N L+  +P ELG+L  L  L LH+N+L      +    + 
Sbjct: 295 SEIPRSLRRCVSLLNLDLSMNQLAGPIPPELGELPSLQRLSLHANRLAGTVPASLTNLVN 354

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR----------------TLRSSLVN 319
           L++L+LS N LSG LP  IG +  LR+L++  N L                 ++  +L +
Sbjct: 355 LTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLSGQIPASISNCTQLANASMSFNLFS 414

Query: 320 GPTPALLKYLRS--RLPENEDSEASTTKEDLITMATRLSVTSKE---------------- 361
           GP PA L  L+S   L   ++S A    +DL        +   E                
Sbjct: 415 GPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQLQKLDLSENSFTGGLSRLVGQLGN 474

Query: 362 ---LSLEGMNLSA-IPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQV 407
              L L+G  LS  IP EI    ++  L L RN     +P  +S+ +SLQ+
Sbjct: 475 LTVLQLQGNALSGEIPEEIGNMTKLISLKLGRNRFAGHVPASISNMSSLQL 525



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 123/289 (42%), Gaps = 20/289 (6%)

Query: 38  GDKWWEAVDLQKLI---LAHNNIE-KLKEDLRNLPLLTVLNVSHNKL-SELPAAIGELHM 92
           G+   E  ++ KLI   L  N     +   + N+  L +L++ HN+L    PA + EL  
Sbjct: 487 GEIPEEIGNMTKLISLKLGRNRFAGHVPASISNMSSLQLLDLGHNRLDGVFPAEVFELRQ 546

Query: 93  LKSLDVSFNSIMK-IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT 150
           L  L    N     IPD + +  +L   D SSN L   +P++LGR   L     S+N + 
Sbjct: 547 LTILGAGSNRFAGPIPDAVANLRSLSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRLA 606

Query: 151 -SLPEDLADCSKMSK----LDVEGNKLTVLSNNLIASWTMLTELIASKNLL-NGMPETIG 204
            ++P   A  + MS     L++  N  T      I    M+  +  S N L  G+P T+ 
Sbjct: 607 GAIPG--AVIASMSNVQMYLNLSNNAFTGAIPAEIGGLVMVQTIDLSNNQLSGGVPATLA 664

Query: 205 SLSRLIRLDLHQNRILS-IPSSISGCCSLAEF--YMGNNALSALPAELGKLSKLGTLDLH 261
               L  LDL  N +   +P+++     L       GN+    +PA++  L  + TLD+ 
Sbjct: 665 GCKNLYSLDLSGNSLTGELPANLFPQLDLLTTLNISGNDLDGEIPADIAALKHIQTLDVS 724

Query: 262 SNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            N        A      L  L+LS+N+  G  P+ G    L    L GN
Sbjct: 725 RNAFAGAIPPALANLTALRSLNLSSNTFEGPVPDGGVFRNLTMSSLQGN 773


>gi|195329192|ref|XP_002031295.1| GM25913 [Drosophila sechellia]
 gi|194120238|gb|EDW42281.1| GM25913 [Drosophila sechellia]
          Length = 898

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 146/298 (48%), Gaps = 4/298 (1%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSL 96
           E D WW  V L  L L+ N +  +   + NL  LTVL +  N L ELP  IG+L  L  L
Sbjct: 244 EEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLMRL 303

Query: 97  DVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDL 156
           +VS N + ++P E+ S   L   + S N+  EL   +     L      +N I SLP  +
Sbjct: 304 NVSHNKLSQLPREMYSLPELRHLNISYNEFDELNPDISDLHMLEFLDGGHNNIQSLPGGI 363

Query: 157 ADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQ 216
               +++ L +  N +  L  +L+ +   L ++    N L  +PE +G L +L  L L  
Sbjct: 364 GFLVRLTALLLPNNHIKELPPDLV-NMRSLQKIDLMHNDLTSLPEDMGLLRKLECLYLQH 422

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAEL-GKLSKLGTLDLHSNQLKEYCVE-ACQ 274
           N IL +P    G  +L+E +  NN +  +P  +   L  L  LDL  N++ E   E    
Sbjct: 423 NDILELP-EFEGNEALSELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDELCLL 481

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
             L+ LD+SNN++S LP  +  +  L  L + GNP++T+R  ++   T  +LK L  R
Sbjct: 482 RNLNRLDVSNNTVSVLPVTLSSLAHLISLQVEGNPIKTIRRDILQCGTTRILKTLHDR 539



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 5/191 (2%)

Query: 149 ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +TS+P+ +   ++   +  +D   N+L+ L N L     ++TEL+ S N++  +P+ I  
Sbjct: 707 LTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQ 766

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            +R+  L+L  N +  +P+      +L E  + NN    +P  + +L  L  L    N +
Sbjct: 767 FTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHI 826

Query: 266 KEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           K   V   Q   RLS LDL NN +  +PP +G +T +  L L GNP R  R  ++   T 
Sbjct: 827 KMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTD 886

Query: 324 ALLKYLRSRLP 334
           A++ YLR R+P
Sbjct: 887 AIMSYLRDRIP 897



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 120/281 (42%), Gaps = 37/281 (13%)

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +LT+   +   +   L  L  S N L  +   I +L  L  L LH N ++ +P  I    
Sbjct: 239 ELTIKEEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLE 298

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
            L    + +N LS LP E+  L +L  L++  N+  E   +   L  L  LD  +N++  
Sbjct: 299 KLMRLNVSHNKLSQLPREMYSLPELRHLNISYNEFDELNPDISDLHMLEFLDGGHNNIQS 358

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPT--------------PALLKYLRS---- 331
           LP  IG +  L  LLL  N ++ L   LVN  +              P  +  LR     
Sbjct: 359 LPGGIGFLVRLTALLLPNNHIKELPPDLVNMRSLQKIDLMHNDLTSLPEDMGLLRKLECL 418

Query: 332 --------RLPENEDSEAST---TKEDLITMATRLSVTS----KELSLEGMNLSAIPSEI 376
                    LPE E +EA +      + I +  +   ++    K L L    ++ +P E+
Sbjct: 419 YLQHNDILELPEFEGNEALSELHASNNFIKIIPKAMCSNLPHLKILDLRDNKITELPDEL 478

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCA---SLQVKFSDLVT 414
                + +LD+S N++  LP  LSS A   SLQV+ + + T
Sbjct: 479 CLLRNLNRLDVSNNTVSVLPVTLSSLAHLISLQVEGNPIKT 519


>gi|410042296|ref|XP_003951408.1| PREDICTED: protein scribble homolog isoform 2 [Pan troglodytes]
          Length = 1608

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 153/326 (46%), Gaps = 48/326 (14%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           ++  ++L+KL L+ N I++L  ++ N   L  L+VS N + E+P +I     L+  D S 
Sbjct: 26  FFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSG 85

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + ++PD      +L     +   L+ LP  +G   NL   +   N + SLP  L+   
Sbjct: 86  NPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 145

Query: 161 KMSKLDVEGNKLTVLSNNLIA--------------------------------SWTMLTE 188
           K+ +LD+ GN L VL + L A                                S   L E
Sbjct: 146 KLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEE 205

Query: 189 LIA-------------SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
           L A             S+NLL  +P+ IG L +L  L + QNR+  +  +I  C +L+E 
Sbjct: 206 LPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSEL 265

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPE 293
            +  N L ALP  LGKL+KL  L++  N L+    E   C + LSVL L +N L+ LPPE
Sbjct: 266 ILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPEIGGC-VALSVLSLRDNRLAVLPPE 324

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVN 319
           +     L  L + GN L++L  +L +
Sbjct: 325 LAHTAELHVLDVAGNRLQSLPFALTH 350



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 145 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 204

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 205 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 263

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 264 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 300

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 301 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTHLNLKALWLAE 360

Query: 285 N 285
           N
Sbjct: 361 N 361



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 152/318 (47%), Gaps = 42/318 (13%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDFKASNNCIT 150
           L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C  L ++DF  S N ++
Sbjct: 32  LRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADF--SGNPLS 89

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
            LP+       ++ L +    L  L  + + +   L  L   +NLL  +P ++  L +L 
Sbjct: 90  RLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENLLKSLPASLSFLVKLE 148

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L  LD+  N+L+E   
Sbjct: 149 QLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 208

Query: 271 EACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E   L L    L S N L  LP  IG++  L                       ++LK  
Sbjct: 209 ELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-----------------------SILKVD 245

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           ++RL   E +EA    E+L            EL L    L A+P  + +  ++T L++ R
Sbjct: 246 QNRL--CEVTEAIGDCENL-----------SELILTENLLMALPRSLGKLTKLTNLNVDR 292

Query: 390 NSIQELPPELSSCASLQV 407
           N ++ LPPE+  C +L V
Sbjct: 293 NHLEALPPEIGGCVALSV 310


>gi|332710873|ref|ZP_08430810.1| Leucine Rich Repeat, Miro-like protein [Moorea producens 3L]
 gi|332350426|gb|EGJ30029.1| Leucine Rich Repeat, Miro-like protein [Moorea producens 3L]
          Length = 868

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 147/284 (51%), Gaps = 26/284 (9%)

Query: 57  IEKLKE-DLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATA 115
           I K KE  L++L L   +    ++L+E+P  +  L  L+ LD+S N +  +P+ IG  T 
Sbjct: 11  ITKAKEKQLKHLYLSNTVIFDDDQLTEIPIEVFNLSQLEELDLSDNKLTTVPESIGKLTN 70

Query: 116 LVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           L + D S N+L  +P S+G+  NL+    S N +T++PE L   +++++LD+  N+LT  
Sbjct: 71  LTQLDLSINKLTTVPESIGKLTNLTQLDLSGNELTTVPESLTKLTQLTQLDLSVNELTT- 129

Query: 176 SNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
                                  +PE++  L+ L +LDL  N + ++P S++   +L E 
Sbjct: 130 -----------------------VPESLTKLTNLTQLDLSFNELTTVPESLTKLTNLTEL 166

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEI 294
           Y+ +N L+ +P  L KL+ L  LDL  NQL        +L  L+ L LS+N L+ +P  +
Sbjct: 167 YLSDNQLTTVPESLTKLTNLTLLDLSDNQLTTVPESLTKLTNLTELYLSDNQLTTVPESL 226

Query: 295 GKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENED 338
            K+T L +L L  NPL T    +V     A+  Y R  L E +D
Sbjct: 227 TKLTNLTELDLMVNPLETPPIEIVKNGIEAIRDYFRQLLEEGKD 270



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 138/273 (50%), Gaps = 37/273 (13%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           ++ LK    S ++   +  L ++P EV+ N  +            L++L L+ N +  + 
Sbjct: 16  EKQLKHLYLSNTVIFDDDQLTEIPIEVF-NLSQ------------LEELDLSDNKLTTVP 62

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
           E +  L  LT L++S NKL+ +P +IG+L  L  LD+S N +  +P+ +   T L + D 
Sbjct: 63  ESIGKLTNLTQLDLSINKLTTVPESIGKLTNLTQLDLSGNELTTVPESLTKLTQLTQLDL 122

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           S N+L  +P SL +  NL+    S N +T++PE                 LT L+N    
Sbjct: 123 SVNELTTVPESLTKLTNLTQLDLSFNELTTVPE----------------SLTKLTN---- 162

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               LTEL  S N L  +PE++  L+ L  LDL  N++ ++P S++   +L E Y+ +N 
Sbjct: 163 ----LTELYLSDNQLTTVPESLTKLTNLTLLDLSDNQLTTVPESLTKLTNLTELYLSDNQ 218

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           L+ +P  L KL+ L  LDL  N L+   +E  +
Sbjct: 219 LTTVPESLTKLTNLTELDLMVNPLETPPIEIVK 251



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 111/217 (51%), Gaps = 14/217 (6%)

Query: 184 TMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALS 243
           + L EL  S N L  +PE+IG L+ L +LDL  N++ ++P SI    +L +  +  N L+
Sbjct: 46  SQLEELDLSDNKLTTVPESIGKLTNLTQLDLSINKLTTVPESIGKLTNLTQLDLSGNELT 105

Query: 244 ALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRK 302
            +P  L KL++L  LDL  N+L        +L  L+ LDLS N L+ +P  + K+T L +
Sbjct: 106 TVPESLTKLTQLTQLDLSVNELTTVPESLTKLTNLTQLDLSFNELTTVPESLTKLTNLTE 165

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L+ N L T+  SL               L +  D++ +T  E L T  T L+    EL
Sbjct: 166 LYLSDNQLTTVPESLTKL--------TNLTLLDLSDNQLTTVPESL-TKLTNLT----EL 212

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
            L    L+ +P  + +   +T+LDL  N ++  P E+
Sbjct: 213 YLSDNQLTTVPESLTKLTNLTELDLMVNPLETPPIEI 249


>gi|424842302|ref|ZP_18266927.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395320500|gb|EJF53421.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 600

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 127/257 (49%), Gaps = 4/257 (1%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N ++ L E L     L VL V  N+L +LP A+  L  L  L  + N + ++P +IGS+ 
Sbjct: 197 NQLQYLPETLSGASALEVLAVDDNRLKKLPEALVYLKKLTFLFAAHNQLQELPPQIGSSR 256

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L+K     NQL+ LP S+G+   L   +  +N +  LP++      + KL ++ N+LTV
Sbjct: 257 NLLKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYLDSNQLTV 316

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L  N     T L  L  + N L  +P  IG+   L  L L+ N + S+P S+     L E
Sbjct: 317 LPIN-FGELTALENLYLNDNQLTSLPSGIGNCKELRELFLNNNAMTSLPDSMGSLYQLEE 375

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE---ACQLRLSVLDLSNNSLSGLP 291
            YM +N ++ LP+  G L  L  L L +N++     +   +   RLS + L NN+   LP
Sbjct: 376 LYMNDNQIANLPSSFGGLKNLKLLYLTNNKINRLSKDLDCSGWKRLSAIYLENNAFQKLP 435

Query: 292 PEIGKMTTLRKLLLTGN 308
             +     L+ L L GN
Sbjct: 436 KALETAPQLQTLYLDGN 452



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 137/281 (48%), Gaps = 2/281 (0%)

Query: 38  GDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLD 97
           GD   E   L  L L +N +++L + L +LP L  L +S+N+L  LP  I  L  L+ L 
Sbjct: 88  GDSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQLQYLPEKIKGLRNLRRLY 147

Query: 98  VSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLA 157
           +  N +  +P+ +     L      +NQL+ +P +LG+   L       N +  LPE L+
Sbjct: 148 IDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLLDKNQLQYLPETLS 207

Query: 158 DCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
             S +  L V+ N+L  L   L+     LT L A+ N L  +P  IGS   L++L +  N
Sbjct: 208 GASALEVLAVDDNRLKKLPEALVY-LKKLTFLFAAHNQLQELPPQIGSSRNLLKLCVEHN 266

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++  +P SI     L    + +N L  LP   G+L  L  L L SNQL    +   +L  
Sbjct: 267 QLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYLDSNQLTVLPINFGELTA 326

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
           L  L L++N L+ LP  IG    LR+L L  N + +L  S+
Sbjct: 327 LENLYLNDNQLTSLPSGIGNCKELRELFLNNNAMTSLPDSM 367



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 138/274 (50%), Gaps = 2/274 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           + +L L+++++  L + +R    L  LN+ +N L ELP  + +L  L+ L +S N +  +
Sbjct: 74  VHRLDLSNDSLVSLGDSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQLQYL 133

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P++I     L +     N+L+ LP++L     L+   A NN + S+PE L    ++  L 
Sbjct: 134 PEKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLL 193

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L   L  + + L  L    N L  +PE +  L +L  L    N++  +P  I
Sbjct: 194 LDKNQLQYLPETLSGA-SALEVLAVDDNRLKKLPEALVYLKKLTFLFAAHNQLQELPPQI 252

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
               +L +  + +N L  LP  +G+L KL  L L  NQLK+      QL+ L  L L +N
Sbjct: 253 GSSRNLLKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYLDSN 312

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            L+ LP   G++T L  L L  N L +L S + N
Sbjct: 313 QLTVLPINFGELTALENLYLNDNQLTSLPSGIGN 346



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 123/250 (49%), Gaps = 5/250 (2%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L  AHN +++L   + +   L  L V HN+L  LP +IG+L  L+ L +  N + ++P  
Sbjct: 238 LFAAHNQLQELPPQIGSSRNLLKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKN 297

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
            G   AL K    SNQL  LP + G    L +   ++N +TSLP  + +C ++ +L +  
Sbjct: 298 FGQLKALRKLYLDSNQLTVLPINFGELTALENLYLNDNQLTSLPSGIGNCKELRELFLNN 357

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI--LSIPSSIS 227
           N +T L +++  S   L EL  + N +  +P + G L  L  L L  N+I  LS     S
Sbjct: 358 NAMTSLPDSM-GSLYQLEELYMNDNQIANLPSSFGGLKNLKLLYLTNNKINRLSKDLDCS 416

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC--QLRLSVLDLSNN 285
           G   L+  Y+ NNA   LP  L    +L TL L  N + E          ++  + L++N
Sbjct: 417 GWKRLSAIYLENNAFQKLPKALETAPQLQTLYLDGNLISEVNDSTIIKMPKIEHISLNDN 476

Query: 286 SLSGLPPEIG 295
            LS LP  +G
Sbjct: 477 QLSELPDNMG 486


>gi|392968303|ref|ZP_10333719.1| Leucine-rich repeat-containing protein 40 [Fibrisoma limi BUZ 3]
 gi|387842665|emb|CCH55773.1| Leucine-rich repeat-containing protein 40 [Fibrisoma limi BUZ 3]
          Length = 840

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 128/240 (53%), Gaps = 2/240 (0%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L    +  + E + + PLL ++ +  N++ +LP  IG+L  L++LD+SFN +  +PDE
Sbjct: 584 LDLHERELSSIHESVFSHPLLKIVLLYSNEIQQLPPQIGKLVNLQTLDLSFNKLTSVPDE 643

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEG 169
           +G  + L     +SNQL+ LP  LG   NL +    +N + SL   L   + + +L +  
Sbjct: 644 LGELSDLQSLVLNSNQLESLPERLGELSNLRELYLGDNKLKSLSAGLGQLTNLKRLYIYH 703

Query: 170 NKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
           N+LT L   L +    L EL    N L  +   +  L+ L  LDL  N++   P+ +S  
Sbjct: 704 NQLTRLPAEL-SKLINLEELSLGGNKLKNLSVELDQLTNLRILDLSANQLTGWPTKLSKL 762

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLS 288
            +L E Y+G+N L +LPAELG+L+ L  LDL  NQL  +  E   L  ++ L+L    LS
Sbjct: 763 SNLRELYLGDNQLKSLPAELGQLTNLQILDLSGNQLTGWPDELSNLSNMTYLNLKGTKLS 822



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 2/219 (0%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSL 152
           + +LD+    +  I + + S   L      SN++++LP  +G+ +NL     S N +TS+
Sbjct: 581 ITALDLHERELSSIHESVFSHPLLKIVLLYSNEIQQLPPQIGKLVNLQTLDLSFNKLTSV 640

Query: 153 PEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
           P++L + S +  L +  N+L  L   L    + L EL    N L  +   +G L+ L RL
Sbjct: 641 PDELGELSDLQSLVLNSNQLESLPERL-GELSNLRELYLGDNKLKSLSAGLGQLTNLKRL 699

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEA 272
            ++ N++  +P+ +S   +L E  +G N L  L  EL +L+ L  LDL +NQL  +  + 
Sbjct: 700 YIYHNQLTRLPAELSKLINLEELSLGGNKLKNLSVELDQLTNLRILDLSANQLTGWPTKL 759

Query: 273 CQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
            +L  L  L L +N L  LP E+G++T L+ L L+GN L
Sbjct: 760 SKLSNLRELYLGDNQLKSLPAELGQLTNLQILDLSGNQL 798



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 115/247 (46%), Gaps = 19/247 (7%)

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           ++ LD+   +L+ +  + + S  +L  ++   N +  +P  IG L  L  LDL  N++ S
Sbjct: 581 ITALDLHERELSSIHES-VFSHPLLKIVLLYSNEIQQLPPQIGKLVNLQTLDLSFNKLTS 639

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVL 280
           +P  +     L    + +N L +LP  LG+LS L  L L  N+LK       QL  L  L
Sbjct: 640 VPDELGELSDLQSLVLNSNQLESLPERLGELSNLRELYLGDNKLKSLSAGLGQLTNLKRL 699

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
            + +N L+ LP E+ K+  L +L L GN L+ L   L       +L              
Sbjct: 700 YIYHNQLTRLPAELSKLINLEELSLGGNKLKNLSVELDQLTNLRIL-------------- 745

Query: 341 ASTTKEDLITMATRLSVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
              +   L    T+LS  S  +EL L    L ++P+E+ +   +  LDLS N +   P E
Sbjct: 746 -DLSANQLTGWPTKLSKLSNLRELYLGDNQLKSLPAELGQLTNLQILDLSGNQLTGWPDE 804

Query: 399 LSSCASL 405
           LS+ +++
Sbjct: 805 LSNLSNM 811



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 73/131 (55%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +  +L++L + HN + +L  +L  L  L  L++  NKL  L   + +L  L+ LD+S N 
Sbjct: 692 QLTNLKRLYIYHNQLTRLPAELSKLINLEELSLGGNKLKNLSVELDQLTNLRILDLSANQ 751

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +   P ++   + L +     NQLK LP+ LG+  NL     S N +T  P++L++ S M
Sbjct: 752 LTGWPTKLSKLSNLRELYLGDNQLKSLPAELGQLTNLQILDLSGNQLTGWPDELSNLSNM 811

Query: 163 SKLDVEGNKLT 173
           + L+++G KL+
Sbjct: 812 TYLNLKGTKLS 822



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 14/196 (7%)

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
           LDLH+  + SI  S+     L    + +N +  LP ++GKL  L TLDL  N+L     E
Sbjct: 584 LDLHERELSSIHESVFSHPLLKIVLLYSNEIQQLPPQIGKLVNLQTLDLSFNKLTSVPDE 643

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLR 330
             +L  L  L L++N L  LP  +G+++ LR+L L  N L++L + L       L    R
Sbjct: 644 LGELSDLQSLVLNSNQLESLPERLGELSNLRELYLGDNKLKSLSAGL-----GQLTNLKR 698

Query: 331 SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRN 390
             +  N+ +        LI +        +ELSL G  L  +  E+ +   +  LDLS N
Sbjct: 699 LYIYHNQLTRLPAELSKLINL--------EELSLGGNKLKNLSVELDQLTNLRILDLSAN 750

Query: 391 SIQELPPELSSCASLQ 406
            +   P +LS  ++L+
Sbjct: 751 QLTGWPTKLSKLSNLR 766



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 5/120 (4%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L L  N ++ L  +L  L  L +L++S N+L+  P  + +L  L+ L +  N + 
Sbjct: 717 INLEELSLGGNKLKNLSVELDQLTNLRILDLSANQLTGWPTKLSKLSNLRELYLGDNQLK 776

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGR-----CLNLSDFKASNNCITSLPEDLADC 159
            +P E+G  T L   D S NQL   P  L        LNL   K S   IT +     DC
Sbjct: 777 SLPAELGQLTNLQILDLSGNQLTGWPDELSNLSNMTYLNLKGTKLSEETITKIKRQFPDC 836


>gi|397497382|ref|XP_003819490.1| PREDICTED: protein scribble homolog isoform 2 [Pan paniscus]
          Length = 1608

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 153/326 (46%), Gaps = 48/326 (14%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           ++  ++L+KL L+ N I++L  ++ N   L  L+VS N + E+P +I     L+  D S 
Sbjct: 26  FFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSG 85

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + ++PD      +L     +   L+ LP  +G   NL   +   N + SLP  L+   
Sbjct: 86  NPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 145

Query: 161 KMSKLDVEGNKLTVLSNNLIA--------------------------------SWTMLTE 188
           K+ +LD+ GN L VL + L A                                S   L E
Sbjct: 146 KLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEE 205

Query: 189 LIA-------------SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
           L A             S+NLL  +P+ IG L +L  L + QNR+  +  +I  C +L+E 
Sbjct: 206 LPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSEL 265

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPE 293
            +  N L ALP  LGKL+KL  L++  N L+    E   C + LSVL L +N L+ LPPE
Sbjct: 266 ILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPEIGGC-VALSVLSLRDNRLAVLPPE 324

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVN 319
           +     L  L + GN L++L  +L +
Sbjct: 325 LAHTAELHVLDVAGNRLQSLPFALTH 350



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 145 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 204

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 205 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 263

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 264 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 300

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 301 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTHLNLKALWLAE 360

Query: 285 N 285
           N
Sbjct: 361 N 361



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 152/318 (47%), Gaps = 42/318 (13%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDFKASNNCIT 150
           L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C  L ++DF  S N ++
Sbjct: 32  LRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADF--SGNPLS 89

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
            LP+       ++ L +    L  L  + + +   L  L   +NLL  +P ++  L +L 
Sbjct: 90  RLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENLLKSLPASLSFLVKLE 148

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L  LD+  N+L+E   
Sbjct: 149 QLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 208

Query: 271 EACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E   L L    L S N L  LP  IG++  L                       ++LK  
Sbjct: 209 ELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-----------------------SILKVD 245

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           ++RL   E +EA    E+L            EL L    L A+P  + +  ++T L++ R
Sbjct: 246 QNRL--CEVTEAIGDCENL-----------SELILTENLLMALPRSLGKLTKLTNLNVDR 292

Query: 390 NSIQELPPELSSCASLQV 407
           N ++ LPPE+  C +L V
Sbjct: 293 NHLEALPPEIGGCVALSV 310


>gi|398338577|ref|ZP_10523280.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
 gi|418675895|ref|ZP_13237181.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400323660|gb|EJO71508.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 281

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 119/232 (51%), Gaps = 6/232 (2%)

Query: 29  YKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIG 88
           Y N ++A +       +D++ L L+ N +  L +++  L  L  L++S+N+L  LP  IG
Sbjct: 26  YHNLNKALQN-----PMDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIG 80

Query: 89  ELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNC 148
           +L  L+ L +  N +  +P EI     L   D  +NQL  LP  +    +L      NN 
Sbjct: 81  KLQKLRYLYLDHNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKDLESLDLRNNQ 140

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
           +T+LP+++    K+  LD+  N+LT +    I     L EL    N L  +P+ IG L  
Sbjct: 141 LTTLPKEIEYLKKLQVLDLNDNQLTTIPKE-IGYLKKLQELYLINNQLTTLPKEIGYLEE 199

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDL 260
           L  LDL +N++ ++P  I     L + Y+ NN  +  P E+GKL KL TL+L
Sbjct: 200 LWLLDLRKNQLTTLPKEIGKLQKLEKLYLKNNQFTTFPKEIGKLQKLNTLNL 251



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 115/238 (48%), Gaps = 25/238 (10%)

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L++S N+L+ LP  I +L  L+SLD+S N ++ +P EIG    L       NQL  LP  
Sbjct: 42  LDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLTTLPKE 101

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +    +L      NN +T+LP+++     +  LD+  N+LT L                 
Sbjct: 102 IEYLKDLESLDLRNNQLTTLPKEIEYLKDLESLDLRNNQLTTL----------------- 144

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
                  P+ I  L +L  LDL+ N++ +IP  I     L E Y+ NN L+ LP E+G L
Sbjct: 145 -------PKEIEYLKKLQVLDLNDNQLTTIPKEIGYLKKLQELYLINNQLTTLPKEIGYL 197

Query: 253 SKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
            +L  LDL  NQL     E  +L +L  L L NN  +  P EIGK+  L  L L   P
Sbjct: 198 EELWLLDLRKNQLTTLPKEIGKLQKLEKLYLKNNQFTTFPKEIGKLQKLNTLNLDDIP 255



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 105/242 (43%), Gaps = 38/242 (15%)

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD+  N+LT L    I     L  L  S N L  +P+ IG L +L  L L  N++ ++P 
Sbjct: 42  LDLSKNQLTTLPKE-IEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLTTLPK 100

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I     L    + NN L+ LP E+  L  L +LDL +NQL     E   L+ L VLDL+
Sbjct: 101 EIEYLKDLESLDLRNNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLN 160

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           +N L+ +P EIG +  L++L L  N L TL         P  + YL              
Sbjct: 161 DNQLTTIPKEIGYLKKLQELYLINNQLTTL---------PKEIGYL-------------- 197

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
             E+L             L L    L+ +P EI +  ++ KL L  N     P E+    
Sbjct: 198 --EELWL-----------LDLRKNQLTTLPKEIGKLQKLEKLYLKNNQFTTFPKEIGKLQ 244

Query: 404 SL 405
            L
Sbjct: 245 KL 246



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 95/216 (43%), Gaps = 37/216 (17%)

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           SKN L  +P+ I  L  L  LDL  N+++++P  I     L   Y+ +N L+ LP E+  
Sbjct: 45  SKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLTTLPKEIEY 104

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L +LDL +NQL     E   L+ L  LDL NN L+ LP EI  +  L+ L L  N L
Sbjct: 105 LKDLESLDLRNNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQL 164

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
            T+         P  + YL+                             +EL L    L+
Sbjct: 165 TTI---------PKEIGYLKK---------------------------LQELYLINNQLT 188

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            +P EI    E+  LDL +N +  LP E+     L+
Sbjct: 189 TLPKEIGYLEELWLLDLRKNQLTTLPKEIGKLQKLE 224



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 13/156 (8%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+L N  L  +P E+        E  K  E++DL+     +N +  L +++  L  L V
Sbjct: 110 SLDLRNNQLTTLPKEI--------EYLKDLESLDLR-----NNQLTTLPKEIEYLKKLQV 156

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ N+L+ +P  IG L  L+ L +  N +  +P EIG    L   D   NQL  LP  
Sbjct: 157 LDLNDNQLTTIPKEIGYLKKLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKE 216

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
           +G+   L      NN  T+ P+++    K++ L+++
Sbjct: 217 IGKLQKLEKLYLKNNQFTTFPKEIGKLQKLNTLNLD 252



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 65/152 (42%), Gaps = 37/152 (24%)

Query: 257 TLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
           TLDL  NQL     E  +L+ L  LDLSNN L  LP EIGK+  LR L L  N L TL  
Sbjct: 41  TLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQLTTL-- 98

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
                  P  ++YL+       D E+                    L L    L+ +P E
Sbjct: 99  -------PKEIEYLK-------DLES--------------------LDLRNNQLTTLPKE 124

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           I    ++  LDL  N +  LP E+     LQV
Sbjct: 125 IEYLKDLESLDLRNNQLTTLPKEIEYLKKLQV 156


>gi|296475861|tpg|DAA17976.1| TPA: erbb2 interacting protein isoform 2 [Bos taurus]
          Length = 1302

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 176/402 (43%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDISKNNIEMVEEGISGCE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              L+++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LVSI--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            L A+PS I +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 310 ELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 24/199 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L ++ NNIE ++E +     L  L +S N L +LP  IG L  + +L +  N +M +
Sbjct: 232 LTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYL 291

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IG   ++ + DCS N+L+ LPSS+G+  N+  F A +N +  LP +           
Sbjct: 292 PDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPE----------- 340

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                        I SW  +T L    N L  +PE +G + +L  ++L  NR+ ++P S 
Sbjct: 341 -------------IGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 227 SGCCSLAEFYMGNNALSAL 245
           +    L   ++ +N    L
Sbjct: 388 TKLQQLTAMWLSDNQSKPL 406



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 4/146 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L+L+ N++++L E + +L  +T L +  N+L  LP +IG L  ++ LD SFN +  
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEA 313

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG  T +  F    N L++LP  +G   N++     +N + +LPE++ D  K+  +
Sbjct: 314 LPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVI 373

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIA 191
           ++  N+L     NL  S+T L +L A
Sbjct: 374 NLSDNRL----KNLPFSFTKLQQLTA 395


>gi|440802431|gb|ELR23360.1| protein phosphatase 2C domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 895

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 145/285 (50%), Gaps = 8/285 (2%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+KL L+ N + +  E L +LP L  L +  N L  L  AIG L  L  L +  NS+  +
Sbjct: 218 LKKLDLSQNGLREFPEALCSLPALADLALDRNYLEGLSPAIGHLSSLTRLSIKANSLKSL 277

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+E+     L +   + NQ+  LP  LG+ +NL     S N IT+LP D++  + + KL+
Sbjct: 278 PEELCDLEYLQELCIADNQVTSLPEGLGKLVNLQKLDISENAITALPADVSGLTALQKLN 337

Query: 167 VEGNKLTVLSNNLIASWT----MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            + NK+  +  +   + T     LTEL  + N L      + +   L  ++L  NR+  +
Sbjct: 338 AKRNKIECIPESATVTETGGFYSLTELNLAHNQLESWSSALWTSEALQVVNLTANRLPEV 397

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P+ IS   +L   ++  N ++ +  ELG+L+ L TL+L  N L+    +   L  L VL 
Sbjct: 398 PAEISYLYNLTHLHLNANRITVVANELGQLAALDTLELSFNDLEAVPADLGYLAALRVLS 457

Query: 282 LSNNSLSGLP-PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           L  N LSG   P++  ++ L +L L GNPL+ +   +  G  PAL
Sbjct: 458 LGYNRLSGEALPDLSALSALEQLFLAGNPLQHVPGWV--GSLPAL 500



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 123/283 (43%), Gaps = 40/283 (14%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP---------------------- 107
           L  L +  N L+ +PA I E   L++LD+ +N I + P                      
Sbjct: 147 LKKLYLFQNHLATIPAEIAEFTELQALDLKYNRIKEWPTALCSVTTLAELLLAGNRVRSF 206

Query: 108 ---DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
              D++    AL K D S N L+E P +L     L+D     N +  L   +   S +++
Sbjct: 207 PPADDMAKLAALKKLDLSQNGLREFPEALCSLPALADLALDRNYLEGLSPAIGHLSSLTR 266

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L ++ N L  L   L      L EL  + N +  +PE +G L  L +LD+ +N I ++P+
Sbjct: 267 LSIKANSLKSLPEEL-CDLEYLQELCIADNQVTSLPEGLGKLVNLQKLDISENAITALPA 325

Query: 225 SISGCCSLAEFYMGNNALSALP-----AELGKLSKLGTLDLHSNQLKE-----YCVEACQ 274
            +SG  +L +     N +  +P      E G    L  L+L  NQL+      +  EA Q
Sbjct: 326 DVSGLTALQKLNAKRNKIECIPESATVTETGGFYSLTELNLAHNQLESWSSALWTSEALQ 385

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
               V++L+ N L  +P EI  +  L  L L  N +  + + L
Sbjct: 386 ----VVNLTANRLPEVPAEISYLYNLTHLHLNANRITVVANEL 424



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 143/337 (42%), Gaps = 61/337 (18%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAA-----IGELHMLKSLDVS 99
           V+LQKL ++ N I  L  D+  L  L  LN   NK+  +P +      G  + L  L+++
Sbjct: 308 VNLQKLDISENAITALPADVSGLTALQKLNAKRNKIECIPESATVTETGGFYSLTELNLA 367

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N +      + ++ AL   + ++N+L E+P+ +    NL+    + N IT +  +L   
Sbjct: 368 HNQLESWSSALWTSEALQVVNLTANRLPEVPAEISYLYNLTHLHLNANRITVVANELGQL 427

Query: 160 SKMSKLDVEGNKLTVLSNNL-----------------------IASWTMLTELIASKNLL 196
           + +  L++  N L  +  +L                       +++ + L +L  + N L
Sbjct: 428 AALDTLELSFNDLEAVPADLGYLAALRVLSLGYNRLSGEALPDLSALSALEQLFLAGNPL 487

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSI------------------------SGCCSL 232
             +P  +GSL  L +L LH  R    PSS+                         G  SL
Sbjct: 488 QHVPGWVGSLPALSQLHLHLVR----PSSLLFTGENAPGHGLYLAELEELPEELCGLPSL 543

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLR-LSVLDLSNNSLSG 289
               +  N L ALPA+L +LS L  L    N L+   V      LR L  +DLS N L  
Sbjct: 544 QYLDVSGNKLKALPAKLPELSGLQRLIACHNALETEGVPDGVDDLRELEEIDLSYNQLKT 603

Query: 290 LPPEIGKMTTLRKLLLTGNPL--RTLRSSLVNGPTPA 324
           +P  +  +     +LL GNPL   TLRS   +  TP+
Sbjct: 604 VPESVHYLKDRAHILLQGNPLDEETLRSYHTHTWTPS 640



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 25/203 (12%)

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P  I G   L + Y+  N L+ +PAE+ + ++L  LDL  N++KE+    C +  L+ L 
Sbjct: 138 PVEILGKKWLKKLYLFQNHLATIPAEIAEFTELQALDLKYNRIKEWPTALCSVTTLAELL 197

Query: 282 LSNNSLSGLPP--EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDS 339
           L+ N +   PP  ++ K+  L+KL L+ N LR    +L + P  A L   R+ L      
Sbjct: 198 LAGNRVRSFPPADDMAKLAALKKLDLSQNGLREFPEALCSLPALADLALDRNYL------ 251

Query: 340 EASTTKEDLITMATRLSVTS----------------KELSLEGMNLSAIPSEIWEAGEIT 383
           E  +     ++  TRLS+ +                +EL +    ++++P  + +   + 
Sbjct: 252 EGLSPAIGHLSSLTRLSIKANSLKSLPEELCDLEYLQELCIADNQVTSLPEGLGKLVNLQ 311

Query: 384 KLDLSRNSIQELPPELSSCASLQ 406
           KLD+S N+I  LP ++S   +LQ
Sbjct: 312 KLDISENAITALPADVSGLTALQ 334


>gi|124006087|ref|ZP_01690923.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
 gi|123988264|gb|EAY27917.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
          Length = 387

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 129/265 (48%), Gaps = 25/265 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L +N +  L  ++  +  L  LN+ +N L ++P  +  +  L+SL++ FN + KI
Sbjct: 127 LQVLNLKNNKLTSLPTEMAKMKYLRRLNLEYNLLEDIPDVMANMSGLRSLNIKFNRLSKI 186

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
            ++IG+ T L   D ++N +  LP S G+   L +     N IT+LP      + + KL+
Sbjct: 187 SNKIGALTQLQTLDLTANGITNLPKSFGQLTQLQELNLQANRITTLPMSFTQLANLKKLN 246

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+  V                         P  I SL++L  L+L +N+   IPS I
Sbjct: 247 LRQNRFKVF------------------------PSHIFSLNQLTSLNLRKNKFSQIPSGI 282

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
           +    L E  +  NALS LP  +    K+  L+L  N+L  + VE  QL  L  L+LS N
Sbjct: 283 TRLQQLEELNLQQNALSRLPTGIAAWKKMKKLNLSKNKLTNFPVEISQLSNLEELNLSFN 342

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPL 310
            +S +P  IG++  L+ L +  N L
Sbjct: 343 QISTIPANIGQLKKLKLLNVANNRL 367



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 77/150 (51%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           + +  +L+KL L  N  +     + +L  LT LN+  NK S++P+ I  L  L+ L++  
Sbjct: 236 FTQLANLKKLNLRQNRFKVFPSHIFSLNQLTSLNLRKNKFSQIPSGITRLQQLEELNLQQ 295

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N++ ++P  I +   + K + S N+L   P  + +  NL +   S N I+++P ++    
Sbjct: 296 NALSRLPTGIAAWKKMKKLNLSKNKLTNFPVEISQLSNLEELNLSFNQISTIPANIGQLK 355

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELI 190
           K+  L+V  N+L+    N + S   +T  I
Sbjct: 356 KLKLLNVANNRLSSAEKNKLRSVLPVTTTI 385



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 122/260 (46%), Gaps = 16/260 (6%)

Query: 149 ITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSR 208
            T  P+D+     +  L++  ++L  L   +  S   L  L    N L  +P  +  +  
Sbjct: 90  FTYFPKDILKLRNLQVLEMVYSELDSLPPVIADSLDYLQVLNLKNNKLTSLPTEMAKMKY 149

Query: 209 LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
           L RL+L  N +  IP  ++    L    +  N LS +  ++G L++L TLDL +N +   
Sbjct: 150 LRRLNLEYNLLEDIPDVMANMSGLRSLNIKFNRLSKISNKIGALTQLQTLDLTANGITNL 209

Query: 269 CVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                QL +L  L+L  N ++ LP    ++  L+KL L  N  +   S + +      L 
Sbjct: 210 PKSFGQLTQLQELNLQANRITTLPMSFTQLANLKKLNLRQNRFKVFPSHIFS------LN 263

Query: 328 YLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
            L S  L +N+ S+  +     IT   +L    +EL+L+   LS +P+ I    ++ KL+
Sbjct: 264 QLTSLNLRKNKFSQIPSG----ITRLQQL----EELNLQQNALSRLPTGIAAWKKMKKLN 315

Query: 387 LSRNSIQELPPELSSCASLQ 406
           LS+N +   P E+S  ++L+
Sbjct: 316 LSKNKLTNFPVEISQLSNLE 335



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 64/139 (46%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           + +   LQ+L L  N I  L      L  L  LN+  N+    P+ I  L+ L SL++  
Sbjct: 213 FGQLTQLQELNLQANRITTLPMSFTQLANLKKLNLRQNRFKVFPSHIFSLNQLTSLNLRK 272

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N   +IP  I     L + +   N L  LP+ +     +     S N +T+ P +++  S
Sbjct: 273 NKFSQIPSGITRLQQLEELNLQQNALSRLPTGIAAWKKMKKLNLSKNKLTNFPVEISQLS 332

Query: 161 KMSKLDVEGNKLTVLSNNL 179
            + +L++  N+++ +  N+
Sbjct: 333 NLEELNLSFNQISTIPANI 351


>gi|432111692|gb|ELK34766.1| Leucine-rich repeat-containing protein 1, partial [Myotis davidii]
          Length = 510

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 139/278 (50%), Gaps = 19/278 (6%)

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
           +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +PD +     L +
Sbjct: 1   RLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEE 60

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNN 178
            D  +N++  LP S+G  ++L D     N ++ LP+++ +   +  LDV  N+L  L   
Sbjct: 61  LDLGNNEIYNLPESIGALVHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEE 120

Query: 179 LIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMG 238
            I+  T LT+L+ S+NLL  +P+ IG L +L  L + QNR+  +P +I  C SL E  + 
Sbjct: 121 -ISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPETIGDCESLTELVLT 179

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQL----KEYCV-------EACQLR-------LSVL 280
            N L  LP  +GKL KL  L+   N+L    KE  +           LR       L+V 
Sbjct: 180 ENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEVKIVMTLNAPHLSYLRQIGGCCSLTVF 239

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV 318
            + +N L+ LP E+ +   L  L + GN L  L  SL 
Sbjct: 240 CVRDNRLTRLPAEVSQAAELHVLDVAGNRLSHLPLSLT 277



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 136/258 (52%), Gaps = 18/258 (6%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 34  NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALVHLKDLWLDGNQLSE 93

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +    +L+D   S N + ++P+ +    K+S L
Sbjct: 94  LPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSIL 153

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS- 224
            V+ N+LT L    I     LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  
Sbjct: 154 KVDQNRLTQLPET-IGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 212

Query: 225 ----------------SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY 268
                            I GCCSL  F + +N L+ LPAE+ + ++L  LD+  N+L   
Sbjct: 213 VKIVMTLNAPHLSYLRQIGGCCSLTVFCVRDNRLTRLPAEVSQAAELHVLDVAGNRLSHL 272

Query: 269 CVEACQLRLSVLDLSNNS 286
            +    L+L  L LS+N 
Sbjct: 273 PLSLTALKLKALWLSDNQ 290



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 143/326 (43%), Gaps = 56/326 (17%)

Query: 83  LPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF 142
           LP +  EL  L  L V+  S+  +P+ IG+   L   +   N L  LP SL +   L + 
Sbjct: 2   LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 61

Query: 143 KASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPET 202
              NN I +LPE +     +  L ++GN+L+ L                        P+ 
Sbjct: 62  DLGNNEIYNLPESIGALVHLKDLWLDGNQLSEL------------------------PQE 97

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHS 262
           IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N L  +P  +GKL KL  L +  
Sbjct: 98  IGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQ 157

Query: 263 NQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL--- 317
           N+L +    +  C+  L+ L L+ N L  LP  IGK+  L  L    N L +L   +   
Sbjct: 158 NRLTQLPETIGDCE-SLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEVKIV 216

Query: 318 --VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
             +N P    L YLR                  I     L+V      +    L+ +P+E
Sbjct: 217 MTLNAPH---LSYLRQ-----------------IGGCCSLTV----FCVRDNRLTRLPAE 252

Query: 376 IWEAGEITKLDLSRNSIQELPPELSS 401
           + +A E+  LD++ N +  LP  L++
Sbjct: 253 VSQAAELHVLDVAGNRLSHLPLSLTA 278



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 105/227 (46%), Gaps = 14/227 (6%)

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +PE IG+L  L  L+L +N +  +P S++    L E  +GNN +  LP  +G L  L
Sbjct: 22  LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALVHL 81

Query: 256 GTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             L L  NQL E   E   L+ L  LD+S N L  LP EI  +T+L  L+++ N L T+ 
Sbjct: 82  KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIP 141

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
             +      ++LK  ++RL     ++   T  D  ++         EL L    L  +P 
Sbjct: 142 DGIGKLKKLSILKVDQNRL-----TQLPETIGDCESLT--------ELVLTENRLLTLPK 188

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCIS 421
            I +  +++ L+  RN +  LP E+    +L       +     C S
Sbjct: 189 SIGKLKKLSNLNADRNKLVSLPKEVKIVMTLNAPHLSYLRQIGGCCS 235


>gi|402871709|ref|XP_003899796.1| PREDICTED: protein LAP2 isoform 3 [Papio anubis]
          Length = 1301

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 177/402 (44%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLF 351



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 159/345 (46%), Gaps = 52/345 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN---PLRTLRSSLVNGPTPALL-KYLRSRLPENED 338
             L  + L+ N   PL  L+    +     +L  Y+  + P  ED
Sbjct: 391 QQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTED 435



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 42/240 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S LP    ++  L +
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L                  A L++L    P N                T+L +    L
Sbjct: 143 LYLND----------------AFLEFL----PAN------------FGRLTKLQI----L 166

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG 422
            L    L  +P  +    ++ +LDL  N   E+P  L   + L+  + D   N+ + I G
Sbjct: 167 ELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD--ANRLTFIPG 224


>gi|359319031|ref|XP_003638976.1| PREDICTED: protein LAP2-like isoform 1 [Canis lupus familiaris]
          Length = 1372

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 175/402 (43%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                                       V+ +EL     
Sbjct: 286 NQLMYLPDSIGG------------------------------------LVSIEELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 46/310 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN 308
            L  + L+ N
Sbjct: 392 QLTAMWLSDN 401



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 2/247 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L + +  L  L  L++  N+ +E+P  + +L  LK   +  N +  I
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFI 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IGS   L   D S N ++ +   +  C NL D   S+N +  LPE +     ++ L 
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLK 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L ++ I     + EL  S N +  +P +IG L+ +       N +  +P  I
Sbjct: 283 IDENQLMYLPDS-IGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               ++   ++ +N L  LP E+G + KL  ++L  N+LK       +L +L+ + LS+N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 286 SLSGLPP 292
               L P
Sbjct: 402 QSKPLIP 408


>gi|344278808|ref|XP_003411184.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7-like [Loxodonta africana]
          Length = 1540

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 151/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSSLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 195 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  +G + +LR L +  N
Sbjct: 314 LPSTVGYLHSLRTLAVDEN 332



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 280

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P T+G L  L  L + +N +  +P 
Sbjct: 281 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPSTVGYLHSLRTLAVDENFLPELPR 339

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 400 DNQSKALIP 408



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 122/320 (38%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P E+ +    L +    +NQ++ELP  L  C  L      +
Sbjct: 19  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N ++SLP                          IAS   L EL  SKN +   PE I   
Sbjct: 79  NDLSSLP------------------------TTIASLVNLKELDISKNGVQEFPENIKCC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L              
Sbjct: 115 KCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL-------------- 160

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                   ++L +L+L  N L  LP  + K+  L +L L  N                  
Sbjct: 161 --------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------------- 196

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
               S LPE            ++     L    +EL ++   L  +P  I +   +  LD
Sbjct: 197 ----SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLD 236

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N I+ +  E+S C +L+
Sbjct: 237 MSKNRIETVDMEISGCEALE 256


>gi|91094303|ref|XP_971940.1| PREDICTED: similar to Lap1 CG10255-PA [Tribolium castaneum]
 gi|270014406|gb|EFA10854.1| hypothetical protein TcasGA2_TC001631 [Tribolium castaneum]
          Length = 692

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 160/326 (49%), Gaps = 40/326 (12%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNI--EKLKEDLRNLPLLT 71
           LN+S+  +R +P  + K                LQ LI + N +  E +  ++  L  LT
Sbjct: 66  LNVSDNEIRSIPPLISK-------------LNSLQVLIFSKNALVLEGVSPNIDKLNKLT 112

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S N L ++P AI  L  L+ L ++   I  +P  IG  + L   +   N L+ELP 
Sbjct: 113 ILDLSMNDLGKVPEAIMSLINLQQLCLNDTGIDYVPANIGRLSNLRILELRDNSLRELPK 172

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS--------------- 176
           S+ R  NL     S+N ++ L E       +++L + GN +T LS               
Sbjct: 173 SIRRLTNLQRLDVSDNNLSQLTEVCESHGNLTELWINGNNITKLSPSITHLKKMNDFDAS 232

Query: 177 -NNL------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGC 229
            NNL      I  WT +T LI S N ++ +P+ IG+L  L  L L  N +  +P++IS  
Sbjct: 233 YNNLQTIPKEIGQWTKITNLILSFNQISVLPKAIGNLRNLQVLKLESNNLEELPNTISKL 292

Query: 230 CSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSL 287
            +L E  + NN +  LP+ +G L KL TL L  N+L++   E  +C   L++L++ NN L
Sbjct: 293 TNLEELNLQNNFIIKLPSGIGHLRKLATLILSDNKLEQLPPEIGSC-CSLTILNVHNNYL 351

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTL 313
             LP E+G +  L  L L GN L  L
Sbjct: 352 HRLPDEVGHLQKLTTLGLIGNKLEYL 377



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 138/270 (51%), Gaps = 2/270 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++LQ+L L    I+ +  ++  L  L +L +  N L ELP +I  L  L+ LDVS N++ 
Sbjct: 132 INLQQLCLNDTGIDYVPANIGRLSNLRILELRDNSLRELPKSIRRLTNLQRLDVSDNNLS 191

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++ +   S   L +   + N + +L  S+     ++DF AS N + ++P+++   +K++ 
Sbjct: 192 QLTEVCESHGNLTELWINGNNITKLSPSITHLKKMNDFDASYNNLQTIPKEIGQWTKITN 251

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  N+++VL    I +   L  L    N L  +P TI  L+ L  L+L  N I+ +PS
Sbjct: 252 LILSFNQISVLP-KAIGNLRNLQVLKLESNNLEELPNTISKLTNLEELNLQNNFIIKLPS 310

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLS 283
            I     LA   + +N L  LP E+G    L  L++H+N L     E   L +L+ L L 
Sbjct: 311 GIGHLRKLATLILSDNKLEQLPPEIGSCCSLTILNVHNNYLHRLPDEVGHLQKLTTLGLI 370

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            N L  LP  + K+T L+ L LT N  + L
Sbjct: 371 GNKLEYLPITVSKLTNLKALWLTPNQTQPL 400



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 147/326 (45%), Gaps = 27/326 (8%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L +L +  NNI KL   + +L  +   + S+N L  +P  IG+   + +L +SFN I  
Sbjct: 202 NLTELWINGNNITKLSPSITHLKKMNDFDASYNNLQTIPKEIGQWTKITNLILSFNQISV 261

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG+   L      SN L+ELP+++ +  NL +    NN I  LP  +    K++ L
Sbjct: 262 LPKAIGNLRNLQVLKLESNNLEELPNTISKLTNLEELNLQNNFIIKLPSGIGHLRKLATL 321

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            +  NKL  L    I S   LT L    N L+ +P+ +G L +L  L L  N++  +P +
Sbjct: 322 ILSDNKLEQLPPE-IGSCCSLTILNVHNNYLHRLPDEVGHLQKLTTLGLIGNKLEYLPIT 380

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           +S   +L   ++  N    L            + L + QL +      Q+ L+ +     
Sbjct: 381 VSKLTNLKALWLTPNQTQPL------------IHLQNEQLPD-----GQVVLTSVLFPQV 423

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRT-LRSSLVNGPTPAL--LKYLRSRL-----PENE 337
            L   PP +    + +   +T N       +SL   PTP    L+ LR+ L     PE++
Sbjct: 424 PLPEAPPPVHLPISTQSYHITFNMDNIPTEASLSRTPTPHHKELRRLRNILRGGEAPESQ 483

Query: 338 DSEASTTKEDLIT-MATRLSVTSKEL 362
               S  KE  +T ++  LSV+   L
Sbjct: 484 PPNISEIKEAKVTHISGDLSVSQSSL 509



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 155/339 (45%), Gaps = 41/339 (12%)

Query: 96  LDVSFNSIMKIP-DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE 154
           LD S   I ++P D   ++  L       N+LK+L   L +C++L     S+N I S+P 
Sbjct: 19  LDYSRCGISEVPVDVYNNSPTLEVLHLEGNKLKDLSPQLFQCIDLRYLNVSDNEIRSIPP 78

Query: 155 DLADCSKMSKLDVEGNKLTV--LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRL 212
            ++  + +  L    N L +  +S N I     LT L  S N L  +PE I SL  L +L
Sbjct: 79  LISKLNSLQVLIFSKNALVLEGVSPN-IDKLNKLTILDLSMNDLGKVPEAIMSLINLQQL 137

Query: 213 DLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN---QLKEYC 269
            L+   I  +P++I    +L    + +N+L  LP  + +L+ L  LD+  N   QL E C
Sbjct: 138 CLNDTGIDYVPANIGRLSNLRILELRDNSLRELPKSIRRLTNLQRLDVSDNNLSQLTEVC 197

Query: 270 VEACQL---------------------RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
                L                     +++  D S N+L  +P EIG+ T +  L+L+ N
Sbjct: 198 ESHGNLTELWINGNNITKLSPSITHLKKMNDFDASYNNLQTIPKEIGQWTKITNLILSFN 257

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            +  L  ++ N     +LK              S   E+L    ++L+   +EL+L+   
Sbjct: 258 QISVLPKAIGNLRNLQVLKL------------ESNNLEELPNTISKLT-NLEELNLQNNF 304

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           +  +PS I    ++  L LS N +++LPPE+ SC SL +
Sbjct: 305 IIKLPSGIGHLRKLATLILSDNKLEQLPPEIGSCCSLTI 343


>gi|296208239|ref|XP_002807054.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7-like [Callithrix jacchus]
          Length = 1574

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 151/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 64  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 111

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 112 SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 171

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 172 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 231

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 232 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 290

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 291 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELES 350

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 351 LPSTIGYLHSLRTLAVDEN 369



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 198 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 257

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 258 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 317

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 318 LKVDDNQLTILPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 376

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS
Sbjct: 377 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 436

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 437 DNQSKALIP 445



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 122/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 56  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 93

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 94  QIEELPKQLFNCQALRKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 152

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L               
Sbjct: 153 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL--------------- 197

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                  ++L +L+L  N L  LP  + K+  L +L L  N                   
Sbjct: 198 -------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF----------------- 233

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              S LPE            ++     L    +EL ++   L  +P  I +   +  LD+
Sbjct: 234 ---SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLDM 274

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  ++S C +L+
Sbjct: 275 SKNRIETVDMDISGCEALE 293


>gi|124009683|ref|ZP_01694354.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123984287|gb|EAY24631.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 373

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 151/294 (51%), Gaps = 13/294 (4%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   LQ +   +N +  L E +  L  L  L +  N+LS+LP +  +L  L  L++  NS
Sbjct: 85  ELAQLQSIDACNNFLTSLPESIGQLKQLKKLYLQDNQLSDLPKSFAQLLQLTLLNLDQNS 144

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
              +P  I S   L++   + N+  +L  ++ +   L     ++N + +LP+++  C ++
Sbjct: 145 FSDLPSGIQSFECLLELSLNHNKFTQLAENIVQFTQLQKLYINHNQLKTLPKNIGQCGQL 204

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            KL +  N+LT L  + I   T L EL AS N L  +P++IG ++ L  L L  N+++ +
Sbjct: 205 QKLYLAHNQLTTLPES-IGQLTQLNELKASHNRLAELPKSIGQITGLYNLRLEYNQLIQL 263

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P SI     L   ++ +N L+ LP  +G ++ L  L +  NQL        QL +L VL+
Sbjct: 264 PKSIGQLNWLYHLHIDHNQLTELPESIGHMNWLYYLHVSHNQLDTLPESIGQLAQLQVLE 323

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           +S+N L+ LP  IG++  L+ L LTGN +            PA L+ ++S LP 
Sbjct: 324 VSHNRLTTLPKSIGRLRQLKSLGLTGNNI-----------APAELQRIKSWLPH 366



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 13/162 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L +++  L+ +P    KN  + G+         LQKL LAHN +  L E +  L  L  L
Sbjct: 184 LYINHNQLKTLP----KNIGQCGQ---------LQKLYLAHNQLTTLPESIGQLTQLNEL 230

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
             SHN+L+ELP +IG++  L +L + +N ++++P  IG    L       NQL ELP S+
Sbjct: 231 KASHNRLAELPKSIGQITGLYNLRLEYNQLIQLPKSIGQLNWLYHLHIDHNQLTELPESI 290

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVL 175
           G    L     S+N + +LPE +   +++  L+V  N+LT L
Sbjct: 291 GHMNWLYYLHVSHNQLDTLPESIGQLAQLQVLEVSHNRLTTL 332



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 115/284 (40%), Gaps = 39/284 (13%)

Query: 137 LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLL 196
           LN  D K     +  LP+ + + +++  +D                        A  N L
Sbjct: 64  LNTEDLKLPKYQLAHLPKQIGELAQLQSID------------------------ACNNFL 99

Query: 197 NGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLG 256
             +PE+IG L +L +L L  N++  +P S +    L    +  N+ S LP+ +     L 
Sbjct: 100 TSLPESIGQLKQLKKLYLQDNQLSDLPKSFAQLLQLTLLNLDQNSFSDLPSGIQSFECLL 159

Query: 257 TLDLHSN---QLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            L L+ N   QL E  V+  QL+   L +++N L  LP  IG+   L+KL L  N L TL
Sbjct: 160 ELSLNHNKFTQLAENIVQFTQLQ--KLYINHNQLKTLPKNIGQCGQLQKLYLAHNQLTTL 217

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTT--------KEDLITMATRLSVTS--KELS 363
             S+        LK   +RL E   S    T           LI +   +   +    L 
Sbjct: 218 PESIGQLTQLNELKASHNRLAELPKSIGQITGLYNLRLEYNQLIQLPKSIGQLNWLYHLH 277

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           ++   L+ +P  I     +  L +S N +  LP  +   A LQV
Sbjct: 278 IDHNQLTELPESIGHMNWLYYLHVSHNQLDTLPESIGQLAQLQV 321


>gi|390459893|ref|XP_003732381.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2-like [Callithrix
           jacchus]
          Length = 1412

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 178/402 (44%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++ NF++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-NFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGLLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   +       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 158/345 (45%), Gaps = 52/345 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIG L  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN---PLRTLRSSLVNGPTPALL-KYLRSRLPENED 338
             L  + L+ N   PL  L+    +     +L  Y+  + P  ED
Sbjct: 391 QQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTED 435



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 42/240 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFNFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S LP    ++  L +
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L                  A L++L    P N                T+L +    L
Sbjct: 143 LYLND----------------AFLEFL----PAN------------FGRLTKLQI----L 166

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG 422
            L    L  +P  +    ++ +LDL  N   E+P  L   + L+  + D   N+ + I G
Sbjct: 167 ELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD--ANRLTFIPG 224


>gi|410909357|ref|XP_003968157.1| PREDICTED: protein scribble homolog [Takifugu rubripes]
          Length = 1701

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 172/366 (46%), Gaps = 63/366 (17%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D I + +R+   L L    L+++P   ++              ++L+KL L+ N I++L 
Sbjct: 29  DEIFRYSRSLEELLLDANQLKELPKPFFR-------------LLNLRKLGLSDNEIQRLP 75

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD------------- 108
            ++ N   L  L++S N + E+P +I     L+  D S N + ++PD             
Sbjct: 76  PEVANFMQLVELDISRNDIPEIPESIKFCRALEIADFSGNPLSRLPDGFTQLRTLAHLAL 135

Query: 109 ----------EIGSATALV-----------------------KFDCSSNQLKELPSSLGR 135
                     +IG+   LV                       + D  SN+L++LP +LG 
Sbjct: 136 NDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLDLGSNELEDLPDTLGA 195

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
             NL +     N +++LPE+L +  ++  LDV  N+L  L + L     +   L+ ++NL
Sbjct: 196 LPNLRELWLDRNQLSTLPEELGNLRRLVCLDVSENRLEELPSELNGLLALTD-LLLTQNL 254

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P++IGSL +L  L + QNR+ ++  SI  C +L E  +  N L +LP  LGKL KL
Sbjct: 255 LEFVPDSIGSLKQLSILKVDQNRMTNLTDSIGECENLTELVLTENLLQSLPQSLGKLKKL 314

Query: 256 GTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
             L++  N+L     E   C   L+VL L +N L  LP E+   T L  L + GN L+ L
Sbjct: 315 TNLNVDRNRLSSVPKELGGCS-SLNVLSLRDNRLGKLPAELADATELHVLDVAGNRLQNL 373

Query: 314 RSSLVN 319
             SL N
Sbjct: 374 PFSLTN 379



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 148/277 (53%), Gaps = 14/277 (5%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           RT   L L++ SL+ +PN++                 +L  L L  N ++ L   L  L 
Sbjct: 128 RTLAHLALNDVSLQTLPNDI-------------GNLANLVTLELRENLLKSLPTSLSFLV 174

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L  L++  N+L +LP  +G L  L+ L +  N +  +P+E+G+   LV  D S N+L+E
Sbjct: 175 KLEQLDLGSNELEDLPDTLGALPNLRELWLDRNQLSTLPEELGNLRRLVCLDVSENRLEE 234

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LPS L   L L+D   + N +  +P+ +    ++S L V+ N++T L+++ I     LTE
Sbjct: 235 LPSELNGLLALTDLLLTQNLLEFVPDSIGSLKQLSILKVDQNRMTNLTDS-IGECENLTE 293

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L+ ++NLL  +P+++G L +L  L++ +NR+ S+P  + GC SL    + +N L  LPAE
Sbjct: 294 LVLTENLLQSLPQSLGKLKKLTNLNVDRNRLSSVPKELGGCSSLNVLSLRDNRLGKLPAE 353

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           L   ++L  LD+  N+L+        L L  + L+ N
Sbjct: 354 LADATELHVLDVAGNRLQNLPFSLTNLNLKAMWLAEN 390



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 157/333 (47%), Gaps = 42/333 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG--R 135
           N+L ELP     L  L+ L +S N I ++P E+ +   LV+ D S N + E+P S+   R
Sbjct: 46  NQLKELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCR 105

Query: 136 CLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N ++ LP+       ++ L +    L  L N+ I +   L  L   +NL
Sbjct: 106 ALEIADF--SGNPLSRLPDGFTQLRTLAHLALNDVSLQTLPND-IGNLANLVTLELRENL 162

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P ++  L +L +LDL  N +  +P ++    +L E ++  N LS LP ELG L +L
Sbjct: 163 LKSLPTSLSFLVKLEQLDLGSNELEDLPDTLGALPNLRELWLDRNQLSTLPEELGNLRRL 222

Query: 256 GTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
             LD+  N+L+E   E    L L+ L L+ N L  +P  IG +  L              
Sbjct: 223 VCLDVSENRLEELPSELNGLLALTDLLLTQNLLEFVPDSIGSLKQL-------------- 268

Query: 315 SSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPS 374
                    ++LK  ++R+         T   D I     L+    EL L    L ++P 
Sbjct: 269 ---------SILKVDQNRM---------TNLTDSIGECENLT----ELVLTENLLQSLPQ 306

Query: 375 EIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
            + +  ++T L++ RN +  +P EL  C+SL V
Sbjct: 307 SLGKLKKLTNLNVDRNRLSSVPKELGGCSSLNV 339



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 14/229 (6%)

Query: 172 LTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
           L  + + +      L EL+   N L  +P+    L  L +L L  N I  +P  ++    
Sbjct: 24  LHTVPDEIFRYSRSLEELLLDANQLKELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQ 83

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGL 290
           L E  +  N +  +P  +     L   D   N L        QLR L+ L L++ SL  L
Sbjct: 84  LVELDISRNDIPEIPESIKFCRALEIADFSGNPLSRLPDGFTQLRTLAHLALNDVSLQTL 143

Query: 291 PPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
           P +IG +  L  L L  N L++L +SL       L+K  +  L  NE  +   T   L  
Sbjct: 144 PNDIGNLANLVTLELRENLLKSLPTSLS-----FLVKLEQLDLGSNELEDLPDTLGALPN 198

Query: 351 MATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPEL 399
           +        +EL L+   LS +P E+     +  LD+S N ++ELP EL
Sbjct: 199 L--------RELWLDRNQLSTLPEELGNLRRLVCLDVSENRLEELPSEL 239



 Score = 39.3 bits (90), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 40/214 (18%)

Query: 196 LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L+ +P+ I   SR L  L L  N++  +P       +L +  + +N +  LP E+    +
Sbjct: 24  LHTVPDEIFRYSRSLEELLLDANQLKELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQ 83

Query: 255 LGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           L  LD+  N + E    ++ C+  L + D S N LS LP    ++ TL  L L    L+T
Sbjct: 84  LVELDISRNDIPEIPESIKFCRA-LEIADFSGNPLSRLPDGFTQLRTLAHLALNDVSLQT 142

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           L + + N                           +L+T+  R ++           L ++
Sbjct: 143 LPNDIGN-------------------------LANLVTLELRENL-----------LKSL 166

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           P+ +    ++ +LDL  N +++LP  L +  +L+
Sbjct: 167 PTSLSFLVKLEQLDLGSNELEDLPDTLGALPNLR 200


>gi|380015498|ref|XP_003691738.1| PREDICTED: LOW QUALITY PROTEIN: protein lap4-like [Apis florea]
          Length = 2046

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 174/395 (44%), Gaps = 49/395 (12%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLK 61
           D IL+ +R+   L L    +RD+P    KNF         +    L+KL L+ N I +L 
Sbjct: 30  DDILRYSRSLEELLLDANHIRDLP----KNF---------FRLQKLRKLGLSDNEIHRLP 76

Query: 62  EDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDC 121
            D++N   L  L+VS N + ++P  I  L  L+  D S N I ++P        L     
Sbjct: 77  PDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGL 136

Query: 122 SSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIA 181
           +   L  LP   G    L   +   N + SLPE L+   K+ +LD+  N + VL  + I 
Sbjct: 137 NDMSLTNLPPDFGSLEALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAH-IG 195

Query: 182 SWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNA 241
               L EL    N L  +P  IG L  L+ LD+ +NR+  +P  I G  SL + ++  N 
Sbjct: 196 ELPALQELWLDHNQLQHLPPEIGELKTLVCLDVSENRLEDLPEEIGGLESLTDLHLSQNV 255

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           +  LP  LG+L KL                      ++L +  N LS L P IG+   L+
Sbjct: 256 IEKLPDGLGELKKL----------------------TILKVDQNRLSTLNPNIGRCENLQ 293

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           +L+LT N L  L  S+        L   R+ L ++  +E    K+        L V    
Sbjct: 294 ELILTENFLLELPVSIGKLLNLNNLNVDRNSL-QSLPTETGNLKQ--------LGV---- 340

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           LSL    L  +P E+ +   +  LD+S N +Q LP
Sbjct: 341 LSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLP 375



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 162/371 (43%), Gaps = 56/371 (15%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L+L  N+I  L ++   L  L  L +S N++  LP  I     L  LDVS N I  I
Sbjct: 39  LEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDI 98

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ I +  AL   D SSN +  LP+   +  NL+    ++  +T+LP D      +  L+
Sbjct: 99  PENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLE 158

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +                         +NLL  +PE++  L +L RLDL  N I  +P+ I
Sbjct: 159 LR------------------------ENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHI 194

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
               +L E ++ +N L  LP E+G+L  L                 C      LD+S N 
Sbjct: 195 GELPALQELWLDHNQLQHLPPEIGELKTL----------------VC------LDVSENR 232

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE-NEDSEASTTK 345
           L  LP EIG + +L  L L+ N +  L   L       +LK  ++RL   N +       
Sbjct: 233 LEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELKKLTILKVDQNRLSTLNPNIGRCENL 292

Query: 346 EDLITMATRL---------SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELP 396
           ++LI     L          +    L+++  +L ++P+E     ++  L L  N +Q LP
Sbjct: 293 QELILTENFLLELPVSIGKLLNLNNLNVDRNSLQSLPTETGNLKQLGVLSLRDNKLQYLP 352

Query: 397 PELSSCASLQV 407
            E+  C +L V
Sbjct: 353 IEVGQCTALHV 363



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 119/274 (43%), Gaps = 33/274 (12%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           RC+ +  FK  N  +  +  D   CS           L  + ++++     L EL+   N
Sbjct: 3   RCIPI--FKGCNRQVEYI--DKRHCS-----------LPCVPDDILRYSRSLEELLLDAN 47

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            +  +P+    L +L +L L  N I  +P  I    +L E  +  N +  +P  +  L  
Sbjct: 48  HIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRA 107

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L   D  SN +        QLR L+VL L++ SL+ LPP+ G +  L+ L L  N L++L
Sbjct: 108 LQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLKSL 167

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTS--KELSLEGMNLSA 371
             SL       L K  R  L +N          D+  +   +      +EL L+   L  
Sbjct: 168 PESLSQ-----LYKLERLDLGDN----------DIEVLPAHIGELPALQELWLDHNQLQH 212

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +P EI E   +  LD+S N +++LP E+    SL
Sbjct: 213 LPPEIGELKTLVCLDVSENRLEDLPEEIGGLESL 246


>gi|345801801|ref|XP_547339.3| PREDICTED: leucine-rich repeat-containing protein 7 [Canis lupus
           familiaris]
          Length = 1537

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 151/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 195 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 314 LPSTIGYLHSLRTLAVDEN 332



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 280

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 281 LKVDDNQLTILPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 339

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 400 DNQSKALIP 408



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 122/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 19  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 56

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 57  QIEELPKQLFNCQALRKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 115

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L               
Sbjct: 116 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL--------------- 160

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                  ++L +L+L  N L  LP  + K+  L +L L  N                   
Sbjct: 161 -------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF----------------- 196

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              S LPE            ++     L    +EL ++   L  +P  I +   +  LD+
Sbjct: 197 ---SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  E+S C +L+
Sbjct: 238 SKNRIETVDMEISGCEALE 256


>gi|317491382|ref|ZP_07949818.1| leucine Rich repeat protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920929|gb|EFV42252.1| leucine Rich repeat protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 297

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 136/253 (53%), Gaps = 2/253 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L + +N +    E +  L  L VLN+S N+++++P +IG+L  L+ LD+  N + ++
Sbjct: 38  LTGLSVYNNQLSSYPEQIGMLSELQVLNISCNQMTKIPDSIGQLRALEMLDLGHNRLSEL 97

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +G  T L+    S+N L ++P++     NL     ++N +T++PE +   S + +L 
Sbjct: 98  PDTMGKLTQLIYLYLSNNSLTDIPATFSALRNLRYLNITDNHLTAIPEAVFAMSALEELR 157

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK++VL+   I+    L EL    N  +  P++IG L++L  LD+  NRI SIP S 
Sbjct: 158 LYNNKISVLAEK-ISELKNLQELHLMNNHFSQFPDSIGQLTQLRVLDISGNRIKSIPDSF 216

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
           +    L +     N LS +P  +  L++L TLDL +N L        +L+ L  LDL  N
Sbjct: 217 AQLNHLQDLNFRFNNLSEVPDTIAALTQLQTLDLRANNLASLPESIQELKNLKRLDLRWN 276

Query: 286 SLSGLPPEIGKMT 298
           S +  P ++  + 
Sbjct: 277 SFTTYPEQLASLV 289



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 132/264 (50%), Gaps = 15/264 (5%)

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           L+     NN ++S PE +   S++  L++  N++T + ++ I     L  L    N L+ 
Sbjct: 38  LTGLSVYNNQLSSYPEQIGMLSELQVLNISCNQMTKIPDS-IGQLRALEMLDLGHNRLSE 96

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P+T+G L++LI L L  N +  IP++ S   +L    + +N L+A+P  +  +S L  L
Sbjct: 97  LPDTMGKLTQLIYLYLSNNSLTDIPATFSALRNLRYLNITDNHLTAIPEAVFAMSALEEL 156

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L++N++     +  +L+ L  L L NN  S  P  IG++T LR L ++GN ++++  S 
Sbjct: 157 RLYNNKISVLAEKISELKNLQELHLMNNHFSQFPDSIGQLTQLRVLDISGNRIKSIPDSF 216

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                   L +  + L E  D+ A+ T+              + L L   NL+++P  I 
Sbjct: 217 AQLNHLQDLNFRFNNLSEVPDTIAALTQ-------------LQTLDLRANNLASLPESIQ 263

Query: 378 EAGEITKLDLSRNSIQELPPELSS 401
           E   + +LDL  NS    P +L+S
Sbjct: 264 ELKNLKRLDLRWNSFTTYPEQLAS 287



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 110/212 (51%), Gaps = 1/212 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L HN + +L + +  L  L  L +S+N L+++PA    L  L+ L+++ N +  I
Sbjct: 84  LEMLDLGHNRLSELPDTMGKLTQLIYLYLSNNSLTDIPATFSALRNLRYLNITDNHLTAI 143

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ + + +AL +    +N++  L   +    NL +    NN  +  P+ +   +++  LD
Sbjct: 144 PEAVFAMSALEELRLYNNKISVLAEKISELKNLQELHLMNNHFSQFPDSIGQLTQLRVLD 203

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN++  + ++  A    L +L    N L+ +P+TI +L++L  LDL  N + S+P SI
Sbjct: 204 ISGNRIKSIPDSF-AQLNHLQDLNFRFNNLSEVPDTIAALTQLQTLDLRANNLASLPESI 262

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
               +L    +  N+ +  P +L  L K G L
Sbjct: 263 QELKNLKRLDLRWNSFTTYPEQLASLVKQGCL 294



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 10/167 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYK----------NFDEAGEGDKWWEAVDLQKLILAH 54
             A R    LN+++  L  +P  V+           N   +   +K  E  +LQ+L L +
Sbjct: 124 FSALRNLRYLNITDNHLTAIPEAVFAMSALEELRLYNNKISVLAEKISELKNLQELHLMN 183

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N+  +  + +  L  L VL++S N++  +P +  +L+ L+ L+  FN++ ++PD I + T
Sbjct: 184 NHFSQFPDSIGQLTQLRVLDISGNRIKSIPDSFAQLNHLQDLNFRFNNLSEVPDTIAALT 243

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            L   D  +N L  LP S+    NL       N  T+ PE LA   K
Sbjct: 244 QLQTLDLRANNLASLPESIQELKNLKRLDLRWNSFTTYPEQLASLVK 290



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 35/229 (15%)

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
           +R + LD   N+ L     I    SL    + NN LS+ P ++G LS+L  L++  NQ+ 
Sbjct: 16  TRFLNLD---NQQLECLDGIELNASLTGLSVYNNQLSSYPEQIGMLSELQVLNISCNQMT 72

Query: 267 EYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPAL 325
           +      QLR L +LDL +N LS LP  +GK+T L  L L+ N L  +         PA 
Sbjct: 73  KIPDSIGQLRALEMLDLGHNRLSELPDTMGKLTQLIYLYLSNNSLTDI---------PAT 123

Query: 326 LKYLRS-RLPENEDSEASTTKEDLITMAT---------RLSVTS---------KELSLEG 366
              LR+ R     D+  +   E +  M+          ++SV +         +EL L  
Sbjct: 124 FSALRNLRYLNITDNHLTAIPEAVFAMSALEELRLYNNKISVLAEKISELKNLQELHLMN 183

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ---VKFSDL 412
            + S  P  I +  ++  LD+S N I+ +P   +    LQ    +F++L
Sbjct: 184 NHFSQFPDSIGQLTQLRVLDISGNRIKSIPDSFAQLNHLQDLNFRFNNL 232


>gi|410967519|ref|XP_003990266.1| PREDICTED: leucine-rich repeat-containing protein 7 [Felis catus]
          Length = 1537

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 151/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 195 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 314 LPSTIGYLHSLRTLAVDEN 332



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 280

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 281 LKVDDNQLTILPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 339

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 400 DNQSKALIP 408



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 122/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 19  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 56

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 57  QIEELPKQLFNCQALRKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 115

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L               
Sbjct: 116 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL--------------- 160

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                  ++L +L+L  N L  LP  + K+  L +L L  N                   
Sbjct: 161 -------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF----------------- 196

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              S LPE            ++     L    +EL ++   L  +P  I +   +  LD+
Sbjct: 197 ---SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  E+S C +L+
Sbjct: 238 SKNRIETVDMEISGCEALE 256


>gi|226531494|ref|NP_001147848.1| LOC100281458 [Zea mays]
 gi|195614118|gb|ACG28889.1| protein lap4 [Zea mays]
          Length = 532

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 142/299 (47%), Gaps = 4/299 (1%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           + +E L   L  L  +T L++S N++  LP+ IG L  L  LD+  N ++ +PD  G  +
Sbjct: 216 DQVEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDTFGELS 275

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
           +L+  D  +NQLK LP+S G  ++L++   S+N +  LP+ L     + +L  E N++  
Sbjct: 276 SLIDLDLRANQLKSLPTSFGNLISLANLDLSSNLLKVLPDCLGKLKNLRRLIAETNEIEE 335

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I S T L EL    N L  +PE IG L  L  L LH NRI  +P++I     L E
Sbjct: 336 LPYT-IGSCTSLVELRLDFNQLKALPEAIGKLENLEILTLHYNRIKGLPTTIGHLTRLRE 394

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSN--QLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
             +  N +  +P  +   + L  L++  N   L+       +L  L  LD+S+N +  LP
Sbjct: 395 LDVSFNEVETIPENICFAASLVKLNVSRNFADLRALPKSIGELEMLEELDISSNQIRVLP 454

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLIT 350
              G ++ LR       PL      +V      L+ Y+++     E S   T +    T
Sbjct: 455 DSFGHLSKLRVFHADETPLEVPPKEVVKLGAQELVNYMKNMAAAREVSRKETDERSFWT 513



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 133/309 (43%), Gaps = 63/309 (20%)

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  +G    + + D S N++  LPS++G    L+     +N + +LP+   + S +  L
Sbjct: 221 LPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDTFGELSSLIDL 280

Query: 166 DVEGNKLTVLS---NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           D+  N+L  L     NLI+    L  L  S NLL  +P+ +G L  L RL    N I  +
Sbjct: 281 DLRANQLKSLPTSFGNLIS----LANLDLSSNLLKVLPDCLGKLKNLRRLIAETNEIEEL 336

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDL 282
           P +I  C SL E  +  N L ALP  +GKL  L  L LH N++K                
Sbjct: 337 PYTIGSCTSLVELRLDFNQLKALPEAIGKLENLEILTLHYNRIK---------------- 380

Query: 283 SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAS 342
                 GLP  IG +T LR+L ++ N + T+                    PEN      
Sbjct: 381 ------GLPTTIGHLTRLRELDVSFNEVETI--------------------PEN------ 408

Query: 343 TTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
                 I  A   S+    +S    +L A+P  I E   + +LD+S N I+ LP      
Sbjct: 409 ------ICFAA--SLVKLNVSRNFADLRALPKSIGELEMLEELDISSNQIRVLPDSFGHL 460

Query: 403 ASLQVKFSD 411
           + L+V  +D
Sbjct: 461 SKLRVFHAD 469



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 106/216 (49%), Gaps = 3/216 (1%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + E   L  L L  N ++ L     NL  L  L++S N L  LP  +G+L  L+ L  
Sbjct: 269 DTFGELSSLIDLDLRANQLKSLPTSFGNLISLANLDLSSNLLKVLPDCLGKLKNLRRLIA 328

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N I ++P  IGS T+LV+     NQLK LP ++G+  NL       N I  LP  +  
Sbjct: 329 ETNEIEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLENLEILTLHYNRIKGLPTTIGH 388

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL--LNGMPETIGSLSRLIRLDLHQ 216
            +++ +LDV  N++  +  N+  + + L +L  S+N   L  +P++IG L  L  LD+  
Sbjct: 389 LTRLRELDVSFNEVETIPENICFAAS-LVKLNVSRNFADLRALPKSIGELEMLEELDISS 447

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           N+I  +P S      L  F+     L   P E+ KL
Sbjct: 448 NQIRVLPDSFGHLSKLRVFHADETPLEVPPKEVVKL 483


>gi|254410122|ref|ZP_05023902.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
           PCC 7420]
 gi|196183158|gb|EDX78142.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
           PCC 7420]
          Length = 297

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 148/299 (49%), Gaps = 39/299 (13%)

Query: 14  LNLSNRSLRDVPNEVYK----------NFDEAGEGDKWWEAVDL--QKLI--LAHNNIEK 59
           L+LS + L ++P E+ K           +++  +G  W +  +L   +L+  +  N ++ 
Sbjct: 21  LDLSGKGLTELPPEIGKLTQLETLILGRWEKEKKGSLWIKGYELIGNRLVPLIVGNRLQS 80

Query: 60  LKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKF 119
           L  +L NL  L  L++S N   ++P  I +L  L+ L +    I KIP+ I     L + 
Sbjct: 81  LPPELSNLVNLRKLDISGNPWEKIPDVITQLRHLEQLTLIRTDIDKIPESISQLVNLTEL 140

Query: 120 DCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL 179
           + S NQL ++P S+ + +NL++   S+N +T +PE +     +++L++ GN+LT      
Sbjct: 141 NLSGNQLTQVPESITQLVNLTELNLSDNQLTQVPESITQLVNLTELNLFGNQLT------ 194

Query: 180 IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGN 239
                              +PE+I  L  L  L+L  N++  +P SI+   +L + Y+  
Sbjct: 195 ------------------QVPESITQLVNLTELNLFGNQLTQVPESITQLVNLTQLYLFG 236

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           N L+ +P  + +L  L  LDL  NQL +      QL  L+ LDLS N L+ +P  I ++
Sbjct: 237 NQLTQVPESISQLVNLTQLDLSHNQLTQVPESISQLVNLTELDLSGNQLTQVPESISQL 295



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 25/244 (10%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           +  N+L  LP  +  L  L+ LD+S N   KIPD I     L +       + ++P S+ 
Sbjct: 73  IVGNRLQSLPPELSNLVNLRKLDISGNPWEKIPDVITQLRHLEQLTLIRTDIDKIPESIS 132

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           + +NL++   S N +T +PE +     +++L++  N+LT                     
Sbjct: 133 QLVNLTELNLSGNQLTQVPESITQLVNLTELNLSDNQLT--------------------- 171

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
               +PE+I  L  L  L+L  N++  +P SI+   +L E  +  N L+ +P  + +L  
Sbjct: 172 ---QVPESITQLVNLTELNLFGNQLTQVPESITQLVNLTELNLFGNQLTQVPESITQLVN 228

Query: 255 LGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L L  NQL +      QL  L+ LDLS+N L+ +P  I ++  L +L L+GN L  +
Sbjct: 229 LTQLYLFGNQLTQVPESISQLVNLTQLDLSHNQLTQVPESISQLVNLTELDLSGNQLTQV 288

Query: 314 RSSL 317
             S+
Sbjct: 289 PESI 292



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 10/135 (7%)

Query: 14  LNLSNRSLRDVPNEVYK--NFDEAG-EGDKWWEA-------VDLQKLILAHNNIEKLKED 63
           LNLS+  L  VP  + +  N  E    G++  +        V+L +L L  N + ++ E 
Sbjct: 163 LNLSDNQLTQVPESITQLVNLTELNLFGNQLTQVPESITQLVNLTELNLFGNQLTQVPES 222

Query: 64  LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSS 123
           +  L  LT L +  N+L+++P +I +L  L  LD+S N + ++P+ I     L + D S 
Sbjct: 223 ITQLVNLTQLYLFGNQLTQVPESISQLVNLTQLDLSHNQLTQVPESISQLVNLTELDLSG 282

Query: 124 NQLKELPSSLGRCLN 138
           NQL ++P S+ + +N
Sbjct: 283 NQLTQVPESISQLVN 297



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 20/178 (11%)

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDL---HSNQLKEYCVEACQL---RLSVLDLSNNSL 287
           E  +    L+ LP E+GKL++L TL L      +     ++  +L   RL  L +  N L
Sbjct: 20  ELDLSGKGLTELPPEIGKLTQLETLILGRWEKEKKGSLWIKGYELIGNRLVPL-IVGNRL 78

Query: 288 SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
             LPPE+  +  LRKL ++GNP   +         P ++  LR      E      T  D
Sbjct: 79  QSLPPELSNLVNLRKLDISGNPWEKI---------PDVITQLRHL----EQLTLIRTDID 125

Query: 348 LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
            I  +    V   EL+L G  L+ +P  I +   +T+L+LS N + ++P  ++   +L
Sbjct: 126 KIPESISQLVNLTELNLSGNQLTQVPESITQLVNLTELNLSDNQLTQVPESITQLVNL 183


>gi|448242545|ref|YP_007406598.1| hypothetical protein SMWW4_v1c27840 [Serratia marcescens WW4]
 gi|445212909|gb|AGE18579.1| hypothetical protein SMWW4_v1c27840 [Serratia marcescens WW4]
          Length = 293

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 125/249 (50%), Gaps = 25/249 (10%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  +++  N L+  PA+I +   L+ L++S N + ++P EIG    L  FD   N+  EL
Sbjct: 34  LRKISLYDNLLTAFPASILQHRNLQVLNISCNQLDRLPPEIGQLQQLEMFDFGHNRASEL 93

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P +LG+   L     S+N  + LP  LA   ++  L+   N+LT L              
Sbjct: 94  PETLGQLHRLKYLYLSDNGFSDLPRALAQLQQLVYLNATDNQLTAL-------------- 139

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+ I SL+ L  L L+ NRI ++P  I    +L E ++  NAL+ALPAE+
Sbjct: 140 ----------PQAIPSLAALQELRLYNNRIGNLPGEIGQLRALRELHIMKNALTALPAEM 189

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
             L +L  LD  +N + E     C+L RLS L+L  N L+ LP  IG++T LR L L  N
Sbjct: 190 ALLGELEILDAANNAITELPASFCRLPRLSELNLRFNQLTRLPENIGELTALRSLDLRAN 249

Query: 309 PLRTLRSSL 317
            L  L  SL
Sbjct: 250 RLSNLPESL 258



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 7/221 (3%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L ++ N +++L  ++  L  L + +  HN+ SELP  +G+LH LK L +S N    
Sbjct: 56  NLQVLNISCNQLDRLPPEIGQLQQLEMFDFGHNRASELPETLGQLHRLKYLYLSDNGFSD 115

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  +     LV  + + NQL  LP ++     L + +  NN I +LP ++     + +L
Sbjct: 116 LPRALAQLQQLVYLNATDNQLTALPQAIPSLAALQELRLYNNRIGNLPGEIGQLRALREL 175

Query: 166 DVEGNKLTVLSNNLIASWTMLTE---LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            +  N LT L     A   +L E   L A+ N +  +P +   L RL  L+L  N++  +
Sbjct: 176 HIMKNALTALP----AEMALLGELEILDAANNAITELPASFCRLPRLSELNLRFNQLTRL 231

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
           P +I    +L    +  N LS LP  LG+LS+L  LDL  N
Sbjct: 232 PENIGELTALRSLDLRANRLSNLPESLGELSRLRKLDLRWN 272



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 119/264 (45%), Gaps = 34/264 (12%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L VLN+S N+L  LP  IG+L  L+                        FD   N+  EL
Sbjct: 57  LQVLNISCNQLDRLPPEIGQLQQLE-----------------------MFDFGHNRASEL 93

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P +LG+   L     S+N  + LP  LA   ++  L+   N+LT L    I S   L EL
Sbjct: 94  PETLGQLHRLKYLYLSDNGFSDLPRALAQLQQLVYLNATDNQLTALPQA-IPSLAALQEL 152

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N +  +P  IG L  L  L + +N + ++P+ ++    L      NNA++ LPA  
Sbjct: 153 RLYNNRIGNLPGEIGQLRALRELHIMKNALTALPAEMALLGELEILDAANNAITELPASF 212

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            +L +L  L+L  NQL        +L  L  LDL  N LS LP  +G+++ LRKL L  N
Sbjct: 213 CRLPRLSELNLRFNQLTRLPENIGELTALRSLDLRANRLSNLPESLGELSRLRKLDLRWN 272

Query: 309 PLRTLRSSLVNGPTPALLKYLRSR 332
                        TP ++  LR+R
Sbjct: 273 DFTH---------TPKIVDILRAR 287



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 124/288 (43%), Gaps = 23/288 (7%)

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P+S G  L+L         +T L E       + K+ +  N LT    +++     L  L
Sbjct: 7   PASTGDALDLD-----GRGLTQLDESQLTGHALRKISLYDNLLTAFPASILQHRN-LQVL 60

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             S N L+ +P  IG L +L   D   NR   +P ++     L   Y+ +N  S LP  L
Sbjct: 61  NISCNQLDRLPPEIGQLQQLEMFDFGHNRASELPETLGQLHRLKYLYLSDNGFSDLPRAL 120

Query: 250 GKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            +L +L  L+   NQL         L  L  L L NN +  LP EIG++  LR+L +  N
Sbjct: 121 AQLQQLVYLNATDNQLTALPQAIPSLAALQELRLYNNRIGNLPGEIGQLRALRELHIMKN 180

Query: 309 PLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMN 368
            L  L + +      ALL  L     E  D+ A+    +L     RL   S EL+L    
Sbjct: 181 ALTALPAEM------ALLGEL-----EILDA-ANNAITELPASFCRLPRLS-ELNLRFNQ 227

Query: 369 LSAIPSEIWEAGEITKLDLSRNSIQELPP---ELSSCASLQVKFSDLV 413
           L+ +P  I E   +  LDL  N +  LP    ELS    L ++++D  
Sbjct: 228 LTRLPENIGELTALRSLDLRANRLSNLPESLGELSRLRKLDLRWNDFT 275



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 65/127 (51%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ+L L +N I  L  ++  L  L  L++  N L+ LPA +  L  L+ LD + N+I ++
Sbjct: 149 LQELRLYNNRIGNLPGEIGQLRALRELHIMKNALTALPAEMALLGELEILDAANNAITEL 208

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P        L + +   NQL  LP ++G    L       N +++LPE L + S++ KLD
Sbjct: 209 PASFCRLPRLSELNLRFNQLTRLPENIGELTALRSLDLRANRLSNLPESLGELSRLRKLD 268

Query: 167 VEGNKLT 173
           +  N  T
Sbjct: 269 LRWNDFT 275



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 57/108 (52%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L +  N +  L  ++  L  L +L+ ++N ++ELPA+   L  L  L++ FN + ++
Sbjct: 172 LRELHIMKNALTALPAEMALLGELEILDAANNAITELPASFCRLPRLSELNLRFNQLTRL 231

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPE 154
           P+ IG  TAL   D  +N+L  LP SLG    L       N  T  P+
Sbjct: 232 PENIGELTALRSLDLRANRLSNLPESLGELSRLRKLDLRWNDFTHTPK 279



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 46/85 (54%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L  A+N I +L      LP L+ LN+  N+L+ LP  IGEL  L+SLD+  N +  
Sbjct: 194 ELEILDAANNAITELPASFCRLPRLSELNLRFNQLTRLPENIGELTALRSLDLRANRLSN 253

Query: 106 IPDEIGSATALVKFDCSSNQLKELP 130
           +P+ +G  + L K D   N     P
Sbjct: 254 LPESLGELSRLRKLDLRWNDFTHTP 278


>gi|330864711|ref|NP_001179037.2| leucine-rich repeat-containing protein 7 [Bos taurus]
 gi|296489182|tpg|DAA31295.1| TPA: leucine rich repeat containing 7 [Bos taurus]
          Length = 1537

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 151/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALKKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 195 EFSELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 314 LPSTIGYLHSLRTLAVDEN 332



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 130/247 (52%), Gaps = 2/247 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++  +
Sbjct: 163 LRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVL 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ L 
Sbjct: 223 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P  I
Sbjct: 283 VDDNQLTILPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREI 341

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
             C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS+N
Sbjct: 342 GSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDN 401

Query: 286 SLSGLPP 292
               L P
Sbjct: 402 QSKALIP 408



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 122/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 19  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 56

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 57  QIEELPKQLFNCQALKKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 115

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L+KL            
Sbjct: 116 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKL------------ 163

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                      +L+L  N L  LP  + K+  L +L L  N                   
Sbjct: 164 ----------RILELRENHLKTLPKSMHKLAQLERLDLGNNEF----------------- 196

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              S LPE            ++     L    +EL ++   L  +P  I +   +  LD+
Sbjct: 197 ---SELPE------------VLDQIQNL----RELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  ++S C +L+
Sbjct: 238 SKNRIETVDMDISGCEALE 256


>gi|194211222|ref|XP_001498354.2| PREDICTED: leucine-rich repeat-containing protein 7 [Equus
           caballus]
          Length = 1537

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 150/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P  IG L  LI LD+ +NRI ++   ISGC 
Sbjct: 195 EFSELP-EVLDQIQNLRELWMDNNALQVLPGNIGKLKMLIYLDMSKNRIETVDMDISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 314 LPSTIGYLHSLRTLAVDEN 332



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    L+  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 221 VLPGNIGKLKMLIYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 280

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 281 LKVDDNQLTILPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 339

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 400 DNQSKALIP 408



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 122/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 19  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 56

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 57  QIEELPKQLFNCQALRKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 115

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L               
Sbjct: 116 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL--------------- 160

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                  ++L +L+L  N L  LP  + K+  L +L L  N                   
Sbjct: 161 -------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF----------------- 196

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              S LPE            ++     L    +EL ++   L  +P  I +   +  LD+
Sbjct: 197 ---SELPE------------VLDQIQNL----RELWMDNNALQVLPGNIGKLKMLIYLDM 237

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  ++S C +L+
Sbjct: 238 SKNRIETVDMDISGCEALE 256


>gi|62646782|ref|XP_216085.3| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Rattus norvegicus]
 gi|109473061|ref|XP_001068373.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Rattus norvegicus]
          Length = 855

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 181/372 (48%), Gaps = 20/372 (5%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K    V+L+ L L+ NN+E+L + +R L  L  L+ + NK+ ++   I  L  + SL+ S
Sbjct: 386 KISHCVNLESLTLSDNNLEELPKKIRKLKNLRQLHANRNKMIKMAEEISHLSKIHSLEFS 445

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N I  +P EI +   + + + + N +   P  L    +L     + N I+ +P DL+  
Sbjct: 446 GNQITHVPIEIKNCKEITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDLSFS 505

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++  L++  NK+T+ S +L  S T L  L  +KN +  +P  I ++  L  L L  N+ 
Sbjct: 506 KQLLHLELNKNKITIFSEHL-CSLTNLEYLDLAKNQIRKIPHCISAMLSLHVLILSDNKF 564

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR--- 276
              P  +    +L    +  N L  +P+E+ KL K+  L+L +N    +  E CQL+   
Sbjct: 565 EIFPKELCSLKNLQLLDISENQLHKIPSEISKLKKIQKLNLSNNNFTHFPAELCQLQTLE 624

Query: 277 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L++  +S   L+ LP E+ +MT L+ L ++ N ++ +  ++  G    L+ +  S    
Sbjct: 625 DLNISQISGKKLTRLPEEVSRMTQLKALNISNNAIKEIPRNI--GELRNLITFHAS---- 678

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
             +++ ++     +++    S     L L G NL+ +PS I++   + +++   N +  L
Sbjct: 679 --NNQINSLPSSFLSLNVLQS-----LDLGGNNLTDLPSAIYKLSSLKEINFDDNPL--L 729

Query: 396 PPELSSCASLQV 407
            P +  C   Q+
Sbjct: 730 RPPMEICKGKQM 741



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 151/344 (43%), Gaps = 52/344 (15%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N LS +P  I   H LK L+ S+N I  IP E+     + +   +SN ++ L
Sbjct: 186 LETLSLQENGLSSIPQEIQLFHNLKVLNASYNEISHIPKELLQLGNMRQLFLNSNHIESL 245

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           PS L     L       N +T +P+ L     +  L++E N+LT+ S +L      L  L
Sbjct: 246 PSGLENLRYLETLSLGKNRLTHIPDSLCGLKNLKTLNLEYNQLTIFSKSL-CFLPKLVSL 304

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N++  +P+ +  L  L  L ++ N++  +   I     + E ++ +N L A+  ++
Sbjct: 305 NLTGNMIGSLPKEVRELKNLENLLMNHNKLTFLAVEIFQLLKIKELHLADNKLEAISPKI 364

Query: 250 GKLSKLGTLDLHSNQLK------EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
               +L  L+L +N L+       +CV      L  L LS+N+L  LP +I K+  LR+L
Sbjct: 365 ENFKELRLLNLDNNLLQSLPKKISHCV-----NLESLTLSDNNLEELPKKIRKLKNLRQL 419

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELS 363
                                                    +  +I MA  +S  SK  S
Sbjct: 420 --------------------------------------HANRNKMIKMAEEISHLSKIHS 441

Query: 364 LE--GMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           LE  G  ++ +P EI    EIT+++L+ N+I   P  L +  SL
Sbjct: 442 LEFSGNQITHVPIEIKNCKEITRVELNYNNIMYFPVGLCALQSL 485



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 171/396 (43%), Gaps = 37/396 (9%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           ++++L L  N+IE L   L NL  L  L++  N+L+ +P ++  L  LK+L++ +N +  
Sbjct: 231 NMRQLFLNSNHIESLPSGLENLRYLETLSLGKNRLTHIPDSLCGLKNLKTLNLEYNQLTI 290

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
               +     LV  + + N +  LP  +    NL +   ++N +T L  ++    K+ +L
Sbjct: 291 FSKSLCFLPKLVSLNLTGNMIGSLPKEVRELKNLENLLMNHNKLTFLAVEIFQLLKIKEL 350

Query: 166 DVEGNKLTVLSNNL----------------------IASWTMLTELIASKNLLNGMPETI 203
            +  NKL  +S  +                      I+    L  L  S N L  +P+ I
Sbjct: 351 HLADNKLEAISPKIENFKELRLLNLDNNLLQSLPKKISHCVNLESLTLSDNNLEELPKKI 410

Query: 204 GSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN 263
             L  L +L  ++N+++ +   IS    +       N ++ +P E+    ++  ++L+ N
Sbjct: 411 RKLKNLRQLHANRNKMIKMAEEISHLSKIHSLEFSGNQITHVPIEIKNCKEITRVELNYN 470

Query: 264 QLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS---SLVN 319
            +  + V  C L+ L  L  + N +S +P ++     L  L L  N +        SL N
Sbjct: 471 NIMYFPVGLCALQSLDYLSFNGNYISEIPVDLSFSKQLLHLELNKNKITIFSEHLCSLTN 530

Query: 320 GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL-SLEGM--------NLS 370
                L K    ++P      A  +   LI    +  +  KEL SL+ +         L 
Sbjct: 531 LEYLDLAKNQIRKIPHC--ISAMLSLHVLILSDNKFEIFPKELCSLKNLQLLDISENQLH 588

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
            IPSEI +  +I KL+LS N+    P EL    +L+
Sbjct: 589 KIPSEISKLKKIQKLNLSNNNFTHFPAELCQLQTLE 624



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 175/386 (45%), Gaps = 27/386 (6%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SLNL+   +  +P EV              E  +L+ L++ HN +  L  ++  L  +  
Sbjct: 303 SLNLTGNMIGSLPKEV-------------RELKNLENLLMNHNKLTFLAVEIFQLLKIKE 349

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L+++ NKL  +   I     L+ L++  N +  +P +I     L     S N L+ELP  
Sbjct: 350 LHLADNKLEAISPKIENFKELRLLNLDNNLLQSLPKKISHCVNLESLTLSDNNLEELPKK 409

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           + +  NL    A+ N +  + E+++  SK+  L+  GN++T +    I +   +T +  +
Sbjct: 410 IRKLKNLRQLHANRNKMIKMAEEISHLSKIHSLEFSGNQITHVPIE-IKNCKEITRVELN 468

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
            N +   P  + +L  L  L  + N I  IP  +S    L    +  N ++     L  L
Sbjct: 469 YNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDLSFSKQLLHLELNKNKITIFSEHLCSL 528

Query: 253 SKLGTLDLHSNQLKE--YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           + L  LDL  NQ+++  +C+ A  L L VL LS+N     P E+  +  L+ L ++ N L
Sbjct: 529 TNLEYLDLAKNQIRKIPHCISAM-LSLHVLILSDNKFEIFPKELCSLKNLQLLDISENQL 587

Query: 311 RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLS 370
             + S +       L K  +  L  N  +       +L  + T   +   ++S  G  L+
Sbjct: 588 HKIPSEI-----SKLKKIQKLNLSNNNFTHFPA---ELCQLQTLEDLNISQIS--GKKLT 637

Query: 371 AIPSEIWEAGEITKLDLSRNSIQELP 396
            +P E+    ++  L++S N+I+E+P
Sbjct: 638 RLPEEVSRMTQLKALNISNNAIKEIP 663



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 4/217 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
            +L+ L LA N I K+   +  +  L VL +S NK    P  +  L  L+ LD+S N + 
Sbjct: 529 TNLEYLDLAKNQIRKIPHCISAMLSLHVLILSDNKFEIFPKELCSLKNLQLLDISENQLH 588

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDF---KASNNCITSLPEDLADCSK 161
           KIP EI     + K + S+N     P+ L +   L D    + S   +T LPE+++  ++
Sbjct: 589 KIPSEISKLKKIQKLNLSNNNFTHFPAELCQLQTLEDLNISQISGKKLTRLPEEVSRMTQ 648

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           +  L++  N +  +  N I     L    AS N +N +P +  SL+ L  LDL  N +  
Sbjct: 649 LKALNISNNAIKEIPRN-IGELRNLITFHASNNQINSLPSSFLSLNVLQSLDLGGNNLTD 707

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +PS+I    SL E    +N L   P E+ K  ++ T+
Sbjct: 708 LPSAIYKLSSLKEINFDDNPLLRPPMEICKGKQMHTI 744



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 10/152 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLSN +    P E+ +               DL    ++   + +L E++  +  L  L
Sbjct: 603 LNLSNNNFTHFPAELCQ----------LQTLEDLNISQISGKKLTRLPEEVSRMTQLKAL 652

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           N+S+N + E+P  IGEL  L +   S N I  +P    S   L   D   N L +LPS++
Sbjct: 653 NISNNAIKEIPRNIGELRNLITFHASNNQINSLPSSFLSLNVLQSLDLGGNNLTDLPSAI 712

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            +  +L +    +N +   P ++    +M  +
Sbjct: 713 YKLSSLKEINFDDNPLLRPPMEICKGKQMHTI 744


>gi|293395817|ref|ZP_06640099.1| leucine-rich repeat protein [Serratia odorifera DSM 4582]
 gi|291421754|gb|EFE95001.1| leucine-rich repeat protein [Serratia odorifera DSM 4582]
          Length = 296

 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 127/269 (47%), Gaps = 29/269 (10%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +   L+K+ L  N +    + + +   L VLN+S N+L++LP  IG L  L+ LD   N 
Sbjct: 33  QGSQLRKISLYDNRLTIFPQQIFDHTNLQVLNISCNQLTQLPQQIGLLRQLEMLDFGHNQ 92

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
             +IPDEIG  T L     S N   +LP +LG+   L     ++N + ++P         
Sbjct: 93  ATQIPDEIGQLTQLRYLYLSDNHFSDLPHTLGQLGELRYLNVTDNRLAAVP--------- 143

Query: 163 SKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
                             A W +  L EL    N +  +P  IG L+RL  L L +NR+ 
Sbjct: 144 -----------------TAVWQLGNLQELRLYNNAITSLPAAIGRLTRLRELHLMKNRLS 186

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
            +P++I+   +L    + NNA+  LP   G+LS+L  L+L  N L       CQL  L  
Sbjct: 187 ELPATIAELTALNVLDVANNAIERLPDSFGQLSQLRELNLRFNALTHLPEAFCQLGALQS 246

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
           LDL  N LS LP  + +M  LR+L L  N
Sbjct: 247 LDLRANRLSTLPAGMAEMKNLRRLDLRWN 275



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 98/220 (44%), Gaps = 24/220 (10%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D+  +   L+ L L+ N+   L   L  L  L  LNV+ N+L+ +P A+ +L  L+ L +
Sbjct: 98  DEIGQLTQLRYLYLSDNHFSDLPHTLGQLGELRYLNVTDNRLAAVPTAVWQLGNLQELRL 157

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N+I  +P  IG  T L +     N+L ELP+++     L+    +NN I  LP+    
Sbjct: 158 YNNAITSLPAAIGRLTRLRELHLMKNRLSELPATIAELTALNVLDVANNAIERLPDSFGQ 217

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNR 218
            S++ +L++  N LT L                        PE    L  L  LDL  NR
Sbjct: 218 LSQLRELNLRFNALTHL------------------------PEAFCQLGALQSLDLRANR 253

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           + ++P+ ++   +L    +  N  +  PA L  L   G L
Sbjct: 254 LSTLPAGMAEMKNLRRLDLRWNDFTQYPAVLDSLIAQGCL 293



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 13/160 (8%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LN+++  L  VP  V             W+  +LQ+L L +N I  L   +  L  L  L
Sbjct: 132 LNVTDNRLAAVPTAV-------------WQLGNLQELRLYNNAITSLPAAIGRLTRLREL 178

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N+LSELPA I EL  L  LDV+ N+I ++PD  G  + L + +   N L  LP + 
Sbjct: 179 HLMKNRLSELPATIAELTALNVLDVANNAIERLPDSFGQLSQLRELNLRFNALTHLPEAF 238

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
            +   L       N +++LP  +A+   + +LD+  N  T
Sbjct: 239 CQLGALQSLDLRANRLSTLPAGMAEMKNLRRLDLRWNDFT 278



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 131/282 (46%), Gaps = 19/282 (6%)

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           + LD +G  LT + + L    + L ++    N L   P+ I   + L  L++  N++  +
Sbjct: 15  AHLDRDGQALTHI-DPLALQGSQLRKISLYDNRLTIFPQQIFDHTNLQVLNISCNQLTQL 73

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLD 281
           P  I     L     G+N  + +P E+G+L++L  L L  N   +      QL  L  L+
Sbjct: 74  PQQIGLLRQLEMLDFGHNQATQIPDEIGQLTQLRYLYLSDNHFSDLPHTLGQLGELRYLN 133

Query: 282 LSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEA 341
           +++N L+ +P  + ++  L++L L  N + +L +++        L  +++RL E   + A
Sbjct: 134 VTDNRLAAVPTAVWQLGNLQELRLYNNAITSLPAAIGRLTRLRELHLMKNRLSELPATIA 193

Query: 342 STTKEDLITMAT----RLSVTS------KELSLEGMNLSAIPSEIWEAGEITKLDLSRNS 391
             T  +++ +A     RL  +       +EL+L    L+ +P    + G +  LDL  N 
Sbjct: 194 ELTALNVLDVANNAIERLPDSFGQLSQLRELNLRFNALTHLPEAFCQLGALQSLDLRANR 253

Query: 392 IQELP---PELSSCASLQVKFSDLVTNK---ESCIS-GCYLY 426
           +  LP    E+ +   L ++++D        +S I+ GC ++
Sbjct: 254 LSTLPAGMAEMKNLRRLDLRWNDFTQYPAVLDSLIAQGCLVH 295


>gi|449514350|ref|XP_004177207.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Taeniopygia guttata]
          Length = 1452

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 158/334 (47%), Gaps = 37/334 (11%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL---------- 179
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L   +          
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSRLTQLERLD 190

Query: 180 ------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
                       +   + L E     N L  +P  IG+L +L  LD+ +N I  +   IS
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEVVEEGIS 250

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LDLSNN 285
           GC SL +  + +N+L  LP  +G L K+ TL +  NQL  Y  ++    +SV  LD S N
Sbjct: 251 GCESLQDLLLSSNSLQQLPESIGSLKKVTTLKIDENQLI-YLPDSIGGLISVEELDCSFN 309

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +  LP  +G+++ +R      N L  L S + N
Sbjct: 310 EIETLPSSVGQLSNIRTFAADHNFLTQLPSEIGN 343



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 24/194 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L ++ NNIE ++E +     L  L +S N L +LP +IG L  + +L +  N ++ +
Sbjct: 232 LTYLDVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPESIGSLKKVTTLKIDENQLIYL 291

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IG   ++ + DCS N+++ LPSS+G+  N+  F A +N +T LP +           
Sbjct: 292 PDSIGGLISVEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPSE----------- 340

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                        I +W  +T L    N L  +PE +G + +L  ++L  NR+ ++P + 
Sbjct: 341 -------------IGNWKHVTVLFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNLPFTF 387

Query: 227 SGCCSLAEFYMGNN 240
           +    L   ++ +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 128/320 (40%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKILPKTMSRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTLIPGFIGTLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N+I+ +   +S C SLQ
Sbjct: 237 VSKNNIEVVEEGISGCESLQ 256


>gi|29791785|gb|AAH50692.1| ERBB2IP protein, partial [Homo sapiens]
          Length = 633

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 177/402 (44%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S + G                           LI++        +EL     
Sbjct: 286 NQLMYLPDS-IGG---------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   +       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 162/345 (46%), Gaps = 52/345 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT---- 257
           TIGSL  +  L + +N+++ +P SI G  S+ E     N + ALP+ +G+L+ L T    
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 258 -------------------LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
                              L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN---PLRTLRSSLVNGPTPALL-KYLRSRLPENED 338
             L  + L+ N   PL  L+    +     +L  Y+  + P  ED
Sbjct: 391 QQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTED 435



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 42/230 (18%)

Query: 196 LNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ LPA +  L  
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 255 LGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           L  LD+  N ++E+   ++ C++ L++++ S N +S LP    ++  L +L L       
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKV-LTIVEASVNPISKLPDGFSQLLNLTQLYLND----- 147

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
                      A L++L    P N                T+L +    L L    L  +
Sbjct: 148 -----------AFLEFL----PAN------------FGRLTKLQI----LELRENQLKML 176

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG 422
           P  +    ++ +LDL  N   E+P  L   + L+  + D   N+ + I G
Sbjct: 177 PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD--ANRLTFIPG 224


>gi|449434074|ref|XP_004134821.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Cucumis
           sativus]
 gi|449524314|ref|XP_004169168.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Cucumis
           sativus]
          Length = 574

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 145/289 (50%), Gaps = 6/289 (2%)

Query: 44  AVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSI 103
           A+DL+  ++  N +E L E +  L  L  L++S N+L+ LP AIG L  L+ LD+  N +
Sbjct: 246 ALDLRNKLM--NQVEWLPESIGKLTNLVSLDLSENRLATLPEAIGALSQLEKLDLHANKL 303

Query: 104 MKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMS 163
            ++P       +LV  D   NQL  LP S G+ ++L +   S+N +TSLPE + +  K+ 
Sbjct: 304 SELPSSFTDLASLVYLDLRGNQLVSLPVSFGKLIHLEELDLSSNMLTSLPESIGNLVKLR 363

Query: 164 KLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
           KL++E N +  + +  I     L EL A  N L  +PE +G +  L  L +  N I  +P
Sbjct: 364 KLNLETNNIEEIPHT-IGRCASLRELTADYNRLKALPEAVGKIETLEILSVRYNNIKQLP 422

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSN--QLKEYCVEACQLR-LSVL 280
           ++++   +L E  +  N L ++P  L   + L  +++ +N   L+        L  L  L
Sbjct: 423 TTMASLANLRELDVSFNELESVPESLCFATNLVKMNIGNNFADLQSLPKSIGNLEMLEEL 482

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           ++SNN +  LP     +T LR L    NP       +      A+++Y+
Sbjct: 483 NISNNQIRFLPDSFRMLTRLRVLRAEENPFEVPPRHIFEKGAQAVVQYM 531



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 41/241 (17%)

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +PE+IG L+ L+ LDL +NR+ ++P +I     L +  +  N LS LP+    L+
Sbjct: 255 NQVEWLPESIGKLTNLVSLDLSENRLATLPEAIGALSQLEKLDLHANKLSELPSSFTDLA 314

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
            L  LDL  NQL    V   +L  L  LDLS+N L+ LP  IG +  LRKL L  N +  
Sbjct: 315 SLVYLDLRGNQLVSLPVSFGKLIHLEELDLSSNMLTSLPESIGNLVKLRKLNLETNNIEE 374

Query: 313 LRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAI 372
           +  ++  G   +L                                  +EL+ +   L A+
Sbjct: 375 IPHTI--GRCASL----------------------------------RELTADYNRLKAL 398

Query: 373 PSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ---VKFSDLVTNKES-CISGCYLYWN 428
           P  + +   +  L +  N+I++LP  ++S A+L+   V F++L +  ES C +   +  N
Sbjct: 399 PEAVGKIETLEILSVRYNNIKQLPTTMASLANLRELDVSFNELESVPESLCFATNLVKMN 458

Query: 429 L 429
           +
Sbjct: 459 I 459



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 7/201 (3%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++S N L+ LP +IG L  L+ L++  N+I +IP  IG   +L +     N+LK L
Sbjct: 339 LEELDLSSNMLTSLPESIGNLVKLRKLNLETNNIEEIPHTIGRCASLRELTADYNRLKAL 398

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P ++G+   L       N I  LP  +A  + + +LDV  N+L  +  +L  + T L ++
Sbjct: 399 PEAVGKIETLEILSVRYNNIKQLPTTMASLANLRELDVSFNELESVPESLCFA-TNLVKM 457

Query: 190 IASKNL--LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPA 247
               N   L  +P++IG+L  L  L++  N+I  +P S      L       N     P 
Sbjct: 458 NIGNNFADLQSLPKSIGNLEMLEELNISNNQIRFLPDSFRMLTRLRVLRAEENPFEVPPR 517

Query: 248 ELGKLSKLGT----LDLHSNQ 264
            + +          +DLH N+
Sbjct: 518 HIFEKGAQAVVQYMIDLHENR 538


>gi|268556666|ref|XP_002636322.1| C. briggsae CBR-LET-413 protein [Caenorhabditis briggsae]
          Length = 681

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 149/302 (49%), Gaps = 17/302 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNL+   + D+P E  KN               L  L L  N   +L E +     +T+L
Sbjct: 86  LNLNRNEITDIP-ETLKNCKM------------LANLKLNGNPFTRLPESISECTSITIL 132

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +++   L+ LP+A+G L  L+ L+   N +  IP  I     L + D   N++++LP+ L
Sbjct: 133 SLNETNLTALPSAMGSLANLRVLEARENHLRTIPSSIVDLKLLEELDLGQNEIEDLPAKL 192

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  +L +F    N +TSLP+ ++DC  + +LDV  N +  L      + + LT+L  S 
Sbjct: 193 GKLSSLREFYVDMNSLTSLPDSISDCRMLDQLDVSENHIIRLPEKF-GNMSGLTDLNISI 251

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N +  +P + G+L RL  L   +N +  +   I  C +L E Y+G N L+ LP  +G L 
Sbjct: 252 NEIIELPRSFGNLKRLQMLKAERNSLTQLTPEIGQCQALTEMYLGQNFLTDLPDSIGDLR 311

Query: 254 KLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
            L TL++  N L E    +  C+  L+VL L  N L+ LP  IGK   +  L +  N L 
Sbjct: 312 NLTTLNVDCNNLSEIPETIGDCKA-LTVLSLRQNILTELPMTIGKCENMTVLDVASNKLT 370

Query: 312 TL 313
            L
Sbjct: 371 NL 372



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 187/409 (45%), Gaps = 54/409 (13%)

Query: 9   RTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLP 68
           R   SL+ S  +L+ +P+++Y+ F +            L+ L L+ NNI+ L   L  L 
Sbjct: 13  RQVDSLDRSQSNLQSIPSDIYR-FRK------------LEDLNLSMNNIKDLGR-LFTLR 58

Query: 69  LLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
            L VL+VS N++S LPA IG+L  L  L+++ N I  IP+ + +   L     + N    
Sbjct: 59  RLKVLDVSDNEISMLPAEIGQLTQLIELNLNRNEITDIPETLKNCKMLANLKLNGNPFTR 118

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
           LP S+  C +++    +   +T+LP  +   + +  L+   N L  + ++++    +   
Sbjct: 119 LPESISECTSITILSLNETNLTALPSAMGSLANLRVLEARENHLRTIPSSIVDLKLLEEL 178

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
            +  +N +  +P  +G LS L    +  N + S+P SIS C  L +  +  N +  LP +
Sbjct: 179 DLG-QNEIEDLPAKLGKLSSLREFYVDMNSLTSLPDSISDCRMLDQLDVSENHIIRLPEK 237

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
            G +S L  L++  N++ E       L RL +L    NSL+ L PEIG+   L ++ L  
Sbjct: 238 FGNMSGLTDLNISINEIIELPRSFGNLKRLQMLKAERNSLTQLTPEIGQCQALTEMYLGQ 297

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                             DL  + T        L+++  
Sbjct: 298 NFLTDLPDSI----------------------------GDLRNLTT--------LNVDCN 321

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           NLS IP  I +   +T L L +N + ELP  +  C ++ V   D+ +NK
Sbjct: 322 NLSEIPETIGDCKALTVLSLRQNILTELPMTIGKCENMTVL--DVASNK 368



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 107/214 (50%), Gaps = 1/214 (0%)

Query: 53  AHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGS 112
             N IE L   L  L  L    V  N L+ LP +I +  ML  LDVS N I+++P++ G+
Sbjct: 181 GQNEIEDLPAKLGKLSSLREFYVDMNSLTSLPDSISDCRMLDQLDVSENHIIRLPEKFGN 240

Query: 113 ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKL 172
            + L   + S N++ ELP S G    L   KA  N +T L  ++  C  ++++ +  N L
Sbjct: 241 MSGLTDLNISINEIIELPRSFGNLKRLQMLKAERNSLTQLTPEIGQCQALTEMYLGQNFL 300

Query: 173 TVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSL 232
           T L ++ I     LT L    N L+ +PETIG    L  L L QN +  +P +I  C ++
Sbjct: 301 TDLPDS-IGDLRNLTTLNVDCNNLSEIPETIGDCKALTVLSLRQNILTELPMTIGKCENM 359

Query: 233 AEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
               + +N L+ LP  +  L KL  L L  NQ +
Sbjct: 360 TVLDVASNKLTNLPFTVKVLYKLQALWLSENQTQ 393



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 1/176 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L +L ++ N+I +L E   N+  LT LN+S N++ ELP + G L  L+ L    NS+ ++
Sbjct: 221 LDQLDVSENHIIRLPEKFGNMSGLTDLNISINEIIELPRSFGNLKRLQMLKAERNSLTQL 280

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
             EIG   AL +     N L +LP S+G   NL+      N ++ +PE + DC  ++ L 
Sbjct: 281 TPEIGQCQALTEMYLGQNFLTDLPDSIGDLRNLTTLNVDCNNLSEIPETIGDCKALTVLS 340

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
           +  N LT L    I     +T L  + N L  +P T+  L +L  L L +N+  SI
Sbjct: 341 LRQNILTELPMT-IGKCENMTVLDVASNKLTNLPFTVKVLYKLQALWLSENQTQSI 395



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 12/200 (6%)

Query: 242 LSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLR 301
           L ++P+++ +  KL  L+L  N +K+        RL VLD+S+N +S LP EIG++T L 
Sbjct: 25  LQSIPSDIYRFRKLEDLNLSMNNIKDLGRLFTLRRLKVLDVSDNEISMLPAEIGQLTQLI 84

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKY---LRSRLPENEDSEASTT-----KEDLITMAT 353
           +L L  N +  +  +L N    A LK      +RLPE+     S T     + +L  + +
Sbjct: 85  ELNLNRNEITDIPETLKNCKMLANLKLNGNPFTRLPESISECTSITILSLNETNLTALPS 144

Query: 354 RLSVTSKELSLEGM--NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
            +   +    LE    +L  IPS I +   + +LDL +N I++LP +L   +SL+  + D
Sbjct: 145 AMGSLANLRVLEARENHLRTIPSSIVDLKLLEELDLGQNEIEDLPAKLGKLSSLREFYVD 204

Query: 412 L--VTNKESCISGCYLYWNL 429
           +  +T+    IS C +   L
Sbjct: 205 MNSLTSLPDSISDCRMLDQL 224


>gi|402871705|ref|XP_003899794.1| PREDICTED: protein LAP2 isoform 1 [Papio anubis]
          Length = 1370

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 177/402 (44%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLF 351



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 159/345 (46%), Gaps = 52/345 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN---PLRTLRSSLVNGPTPALL-KYLRSRLPENED 338
             L  + L+ N   PL  L+    +     +L  Y+  + P  ED
Sbjct: 391 QQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTED 435



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 42/240 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S LP    ++  L +
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L                  A L++L    P N                T+L +    L
Sbjct: 143 LYLND----------------AFLEFL----PAN------------FGRLTKLQI----L 166

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG 422
            L    L  +P  +    ++ +LDL  N   E+P  L   + L+  + D   N+ + I G
Sbjct: 167 ELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD--ANRLTFIPG 224


>gi|380814688|gb|AFE79218.1| protein LAP2 isoform 7 [Macaca mulatta]
          Length = 1301

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 177/402 (44%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLIYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLF 351



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 159/345 (46%), Gaps = 52/345 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN---PLRTLRSSLVNGPTPALL-KYLRSRLPENED 338
             L  + L+ N   PL  L+    +     +L  Y+  + P  ED
Sbjct: 391 QQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTED 435



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 42/240 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S LP    ++  L +
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L                  A L++L    P N                T+L +    L
Sbjct: 143 LYLND----------------AFLEFL----PAN------------FGRLTKLQI----L 166

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG 422
            L    L  +P  +    ++ +LDL  N   E+P  L   + L+  + D   N+ + I G
Sbjct: 167 ELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD--ANRLTFIPG 224


>gi|332214711|ref|XP_003256479.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Nomascus leucogenys]
          Length = 560

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 181/396 (45%), Gaps = 36/396 (9%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L L    L+++P  + KN               L+ L L  N+++ L +++ N   L  +
Sbjct: 123 LRLYQTDLKEIPVVICKNLHH------------LELLGLTGNHLKCLPKEIVNQTKLREI 170

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
            +  N+    P  +  L+ L+ +D+  N I  IP+EIG  T L KF  +SN L  LP+SL
Sbjct: 171 YLKRNQFEVFPQELCVLYTLEIIDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASL 230

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
            +C  LS    S+N + S+P+ LA   KM+++ + GN+L  +   LI  WT L  L    
Sbjct: 231 CQCSQLSVLDLSHNLLRSIPKSLAKLRKMTEIGLSGNRLEKVP-RLICGWTSLHLLYLGN 289

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
             L+ +  +   L  L  LDL QN +   P  I    +L    + +N +  LP+ELG LS
Sbjct: 290 TGLHRLRGSFRCLVNLRCLDLSQNHLDHCPMQICALKNLEVLGLDDNRIGQLPSELGSLS 349

Query: 254 KLGTLDLHSNQLKEYCVEACQL----RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           KL  L L  N+   +  E   L    +L +       L+ +P  I K+ +L++L +  N 
Sbjct: 350 KLKILGLTGNEFLSFPEEVLSLASLEKLYIGQDQGFKLTYVPEHIRKLQSLKELYIENNH 409

Query: 310 LRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKE--DLITMATRLSVTSKELSLEGM 367
           L  L  SL + P   +L           D   +  K+  D I  A  L    KEL LE  
Sbjct: 410 LEYLPVSLGSMPNLEVL-----------DCRHNLLKQLPDAICQAQAL----KELRLEDN 454

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCA 403
            L+ +P  +     +  L L  N ++E P E+  CA
Sbjct: 455 LLTHLPENLDSLVNLKVLTLMDNPMEEPPKEV--CA 488



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 151/339 (44%), Gaps = 13/339 (3%)

Query: 70  LTVLNVSHNKLSELPAAIGE-LHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE 128
           L  L +    L E+P  I + LH L+ L ++ N +  +P EI + T L +     NQ + 
Sbjct: 120 LRELRLYQTDLKEIPVVICKNLHHLELLGLTGNHLKCLPKEIVNQTKLREIYLKRNQFEV 179

Query: 129 LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTE 188
            P  L     L       N I ++PE++   + + K  +  N L VL  +L    + L+ 
Sbjct: 180 FPQELCVLYTLEIIDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASL-CQCSQLSV 238

Query: 189 LIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAE 248
           L  S NLL  +P+++  L ++  + L  NR+  +P  I G  SL   Y+GN  L  L   
Sbjct: 239 LDLSHNLLRSIPKSLAKLRKMTEIGLSGNRLEKVPRLICGWTSLHLLYLGNTGLHRLRGS 298

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
              L  L  LDL  N L    ++ C L+ L VL L +N +  LP E+G ++ L+ L LTG
Sbjct: 299 FRCLVNLRCLDLSQNHLDHCPMQICALKNLEVLGLDDNRIGQLPSELGSLSKLKILGLTG 358

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N         ++ P   L      +L   +D     T    +    R   + KEL +E  
Sbjct: 359 N-------EFLSFPEEVLSLASLEKLYIGQDQGFKLT---YVPEHIRKLQSLKELYIENN 408

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +L  +P  +     +  LD   N +++LP  +    +L+
Sbjct: 409 HLEYLPVSLGSMPNLEVLDCRHNLLKQLPDAICQAQALK 447



 Score = 42.0 bits (97), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 87/226 (38%), Gaps = 39/226 (17%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           R   +D   + + +IP  I     L E ++ NN +  +P E+  L  +  L L  N L+ 
Sbjct: 26  RTFFIDASNHSLTAIPLEIFTFTELEEVHLENNQIEEIPKEIQHLKNIRVLYLDKNNLRS 85

Query: 268 YC-------------------------VEACQLRLSVLDLSNNSLSGLPPEIGK-MTTLR 301
            C                         V +    L  L L    L  +P  I K +  L 
Sbjct: 86  LCPALGLLSSLESLDLSYNPIFSSSLVVVSFLHALRELRLYQTDLKEIPVVICKNLHHLE 145

Query: 302 KLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
            L LTGN L+ L   +VN  T     YL+        ++     ++L  + T L +    
Sbjct: 146 LLGLTGNHLKCLPKEIVNQ-TKLREIYLKR-------NQFEVFPQELCVLYT-LEI---- 192

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
           + L+   + AIP EI     + K  ++ N++  LP  L  C+ L V
Sbjct: 193 IDLDENKIGAIPEEIGHLTGLQKFYMASNNLPVLPASLCQCSQLSV 238


>gi|301767858|ref|XP_002919342.1| PREDICTED: protein LAP2-like isoform 3 [Ailuropoda melanoleuca]
          Length = 1302

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 175/402 (43%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                                       V+ +EL     
Sbjct: 286 NQLMYLPDSIGG------------------------------------LVSIEELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   +       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 159/344 (46%), Gaps = 50/344 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN---PLRTLRSSLVNGPTPALL-KYLRSRLPENED 338
            L  + L+ N   PL  L+    +     +L  Y+  + P  ED
Sbjct: 392 QLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTED 435


>gi|432855257|ref|XP_004068131.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Oryzias
           latipes]
          Length = 1635

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 152/330 (46%), Gaps = 37/330 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP E++ +F+             L++L L  N IE+L + L N   L  L
Sbjct: 62  LDYSHCSLQQVPKEIF-SFERT-----------LEELYLDANQIEELPKQLFNCQALKKL 109

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N I + PD I     L   + S N + +LP   
Sbjct: 110 SMPDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGF 169

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL-------------- 179
            + LNL+    ++  +  LP +    SK+  L++  N L  +  ++              
Sbjct: 170 TQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSN 229

Query: 180 --------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
                   +     L EL    N L  +P +IG L +L  LDL +NRI ++ S +SGC +
Sbjct: 230 EFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDSDVSGCEA 289

Query: 232 LAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSG 289
           L +  + +N L  LP  +G L KL TL +  NQL    + + +  L L   D S N L  
Sbjct: 290 LEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPHTIGSLSL-LEEFDCSCNELES 348

Query: 290 LPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           LPP IG + +LR      N L  L   + N
Sbjct: 349 LPPTIGYLHSLRTFAADENFLTELPREIGN 378



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 2/247 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N+++ + + +  L  L  L++  N+ SE+P  + ++H LK L +  NS+  I
Sbjct: 198 LRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTI 257

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG    L   D + N+++ L S +  C  L D   S+N +  LP+ +    K++ L 
Sbjct: 258 PGSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLK 317

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+LT L +  I S ++L E   S N L  +P TIG L  L      +N +  +P  I
Sbjct: 318 VDDNQLTSLPHT-IGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREI 376

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
             C ++    + +N L  LP E+G+++KL  L+L  N+LK       +L+ L+ L LS+N
Sbjct: 377 GNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDN 436

Query: 286 SLSGLPP 292
               L P
Sbjct: 437 QSKALIP 443



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 124/320 (38%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE  ++  LD S  S+ ++P EI S    L +    +NQ++ELP  L  C  L      +
Sbjct: 54  GEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPD 113

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +++LP                          IAS   L EL  SKN +   P+ I   
Sbjct: 114 NDLSNLP------------------------TTIASLVNLKELDISKNGIQEFPDNIKCC 149

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   +   +L + ++ +  L  LPA  G+LSKL           
Sbjct: 150 KGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKL----------- 198

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  +P  I ++T L +L L  N                  
Sbjct: 199 -----------RILELRENHLKTMPKSIHRLTQLERLDLGSN------------------ 229

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                     E SE     E +  +        KEL L+  +L  IP  I +  ++  LD
Sbjct: 230 ----------EFSEVPEVLEQIHNL--------KELWLDNNSLQTIPGSIGKLRQLRYLD 271

Query: 387 LSRNSIQELPPELSSCASLQ 406
           L++N I+ L  ++S C +L+
Sbjct: 272 LAKNRIETLDSDVSGCEALE 291


>gi|449278701|gb|EMC86492.1| Protein LAP2 [Columba livia]
          Length = 1413

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 157/334 (47%), Gaps = 37/334 (11%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL---------- 179
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L   +          
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSRLTQLERLD 190

Query: 180 ------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
                       +   + L E     N L  +P  IG+L +L  LD+ +N I  +   IS
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEVVEEGIS 250

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LRLSVLDLSNN 285
           GC SL +  + +N+L  LP  +G L K+ TL +  NQL  Y  ++    + L  LD S N
Sbjct: 251 GCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLI-YLPDSVGGLISLEELDCSFN 309

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
            +  LP  IG+++ +R      N L  L S + N
Sbjct: 310 EIETLPSSIGQLSNIRTFAADHNFLTQLPSEIGN 343



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 24/194 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L ++ NNIE ++E +     L  L +S N L +LP  IG L  + +L +  N ++ +
Sbjct: 232 LTYLDVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIYL 291

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +G   +L + DCS N+++ LPSS+G+  N+  F A +N +T LP +           
Sbjct: 292 PDSVGGLISLEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSE----------- 340

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                        I +W  +T L    N L  +PE +G + +L  ++L  NR+ ++P + 
Sbjct: 341 -------------IGNWKHVTVLFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNLPFTF 387

Query: 227 SGCCSLAEFYMGNN 240
           +    L   ++ +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 128/320 (40%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKILPKTMSRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              KE  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------KEFWMDGNRLTLIPGFIGTLKQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N+I+ +   +S C SLQ
Sbjct: 237 VSKNNIEVVEEGISGCESLQ 256


>gi|429961718|gb|ELA41263.1| hypothetical protein VICG_01752, partial [Vittaforma corneae ATCC
           50505]
          Length = 342

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 136/281 (48%), Gaps = 25/281 (8%)

Query: 57  IEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATAL 116
           I  +  +++ L  L  L++S NKL  LP  IG L  LK+LD++ N++  +P EIG    L
Sbjct: 8   ITSIDSNIKRLVKLEKLDLSVNKLESLPPEIGRLVNLKTLDLNINNLETLPSEIGDLVNL 67

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
            K   ++N L+ LPS +G+  NL D    +N + +LP ++ +  ++  L +  N L +L 
Sbjct: 68  QKLYLNNNNLETLPSEIGKLTNLQDLHLIDNNLETLPSEIGELKRLRNLHLSNNNLKILL 127

Query: 177 NNLIASWTMLTELIASKNLLNGMPE-----------------------TIGSLSRLIRLD 213
              I     L EL  S N +  +P                         IG L+ L  L 
Sbjct: 128 PK-IGGLVNLRELYLSGNNIEALPSEIGDLVNLRNLHLNNNKLKSFPVVIGKLTNLQELH 186

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L+ N++ S+PS I    +L   Y+ +N    L  E+G+L  L  L    N+LK    +  
Sbjct: 187 LNGNKLKSLPSEIRTLKNLEILYLNDNEFEPLSTEIGELENLKMLHFRDNKLKSLPAKIG 246

Query: 274 QLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           +L+ L  + L+NN L  LP EIG++  LR L L  N L+ L
Sbjct: 247 KLKNLETIYLNNNELESLPSEIGELRNLRYLDLRNNKLKVL 287



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/266 (34%), Positives = 140/266 (52%), Gaps = 3/266 (1%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V+L+ L L  NN+E L  ++ +L  L  L +++N L  LP+ IG+L  L+ L +  N++ 
Sbjct: 42  VNLKTLDLNINNLETLPSEIGDLVNLQKLYLNNNNLETLPSEIGKLTNLQDLHLIDNNLE 101

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P EIG    L     S+N LK L   +G  +NL +   S N I +LP ++ D   +  
Sbjct: 102 TLPSEIGELKRLRNLHLSNNNLKILLPKIGGLVNLRELYLSGNNIEALPSEIGDLVNLRN 161

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L +  NKL      +I   T L EL  + N L  +P  I +L  L  L L+ N    + +
Sbjct: 162 LHLNNNKLKSFP-VVIGKLTNLQELHLNGNKLKSLPSEIRTLKNLEILYLNDNEFEPLST 220

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I    +L   +  +N L +LPA++GKL  L T+ L++N+L+    E  +LR L  LDL 
Sbjct: 221 EIGELENLKMLHFRDNKLKSLPAKIGKLKNLETIYLNNNELESLPSEIGELRNLRYLDLR 280

Query: 284 NNSLSGLPPEIGKM-TTLRKLLLTGN 308
           NN L  LP  I K+ ++L  L LTGN
Sbjct: 281 NNKLKVLPDTIRKLFSSLHLLYLTGN 306



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 135/256 (52%), Gaps = 7/256 (2%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           + V+LQKL L +NN+E L  ++  L  L  L++  N L  LP+ IGEL  L++L +S N+
Sbjct: 63  DLVNLQKLYLNNNNLETLPSEIGKLTNLQDLHLIDNNLETLPSEIGELKRLRNLHLSNNN 122

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +  +IG    L +   S N ++ LPS +G  +NL +   +NN + S P  +   + +
Sbjct: 123 LKILLPKIGGLVNLRELYLSGNNIEALPSEIGDLVNLRNLHLNNNKLKSFPVVIGKLTNL 182

Query: 163 SKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSI 222
            +L + GNKL  L +  I +   L  L  + N    +   IG L  L  L    N++ S+
Sbjct: 183 QELHLNGNKLKSLPSE-IRTLKNLEILYLNDNEFEPLSTEIGELENLKMLHFRDNKLKSL 241

Query: 223 PSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEY--CVEACQLRLSVL 280
           P+ I    +L   Y+ NN L +LP+E+G+L  L  LDL +N+LK     +      L +L
Sbjct: 242 PAKIGKLKNLETIYLNNNELESLPSEIGELRNLRYLDLRNNKLKVLPDTIRKLFSSLHLL 301

Query: 281 DLSNNSLSGLPPEIGK 296
            L+ NS+S    EIG+
Sbjct: 302 YLTGNSIS----EIGE 313



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 134/327 (40%), Gaps = 61/327 (18%)

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            I  I   I     L K D S N+L+ LP  +GR +NL     + N + +LP ++ D   
Sbjct: 7   GITSIDSNIKRLVKLEKLDLSVNKLESLPPEIGRLVNLKTLDLNINNLETLPSEIGDLVN 66

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           + KL +  N L  L +  I   T L +L    N L  +P  IG L RL  L L  N +  
Sbjct: 67  LQKLYLNNNNLETLPSE-IGKLTNLQDLHLIDNNLETLPSEIGELKRLRNLHLSNNNLKI 125

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAE-----------------------LGKLSKLGTL 258
           +   I G  +L E Y+  N + ALP+E                       +GKL+ L  L
Sbjct: 126 LLPKIGGLVNLRELYLSGNNIEALPSEIGDLVNLRNLHLNNNKLKSFPVVIGKLTNLQEL 185

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L+ N+LK    E   L+ L +L L++N    L  EIG++  L+ L    N L++L    
Sbjct: 186 HLNGNKLKSLPSEIRTLKNLEILYLNDNEFEPLSTEIGELENLKMLHFRDNKLKSL---- 241

Query: 318 VNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIW 377
                PA +  L++                            + + L    L ++PSEI 
Sbjct: 242 -----PAKIGKLKNL---------------------------ETIYLNNNELESLPSEIG 269

Query: 378 EAGEITKLDLSRNSIQELPPELSSCAS 404
           E   +  LDL  N ++ LP  +    S
Sbjct: 270 ELRNLRYLDLRNNKLKVLPDTIRKLFS 296



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 41/217 (18%)

Query: 219 ILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RL 277
           I SI S+I     L +  +  N L +LP E+G+L  L TLDL+ N L+    E   L  L
Sbjct: 8   ITSIDSNIKRLVKLEKLDLSVNKLESLPPEIGRLVNLKTLDLNINNLETLPSEIGDLVNL 67

Query: 278 SVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENE 337
             L L+NN+L  LP EIGK+T L+ L L  N L TL S +        LK LR+      
Sbjct: 68  QKLYLNNNNLETLPSEIGKLTNLQDLHLIDNNLETLPSEI------GELKRLRN------ 115

Query: 338 DSEASTTKEDLITMATRLS--VTSKELSLEGMNLSAIPSEIWEA---------------- 379
                 +  +L  +  ++   V  +EL L G N+ A+PSEI +                 
Sbjct: 116 ---LHLSNNNLKILLPKIGGLVNLRELYLSGNNIEALPSEIGDLVNLRNLHLNNNKLKSF 172

Query: 380 ----GEIT---KLDLSRNSIQELPPELSSCASLQVKF 409
               G++T   +L L+ N ++ LP E+ +  +L++ +
Sbjct: 173 PVVIGKLTNLQELHLNGNKLKSLPSEIRTLKNLEILY 209


>gi|119626866|gb|EAX06461.1| leucine rich repeat containing 7, isoform CRA_a [Homo sapiens]
          Length = 1527

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 150/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 64  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 111

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 112 SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 171

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 172 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 231

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +   L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 232 EFGELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 290

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 291 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 350

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 351 LPSTIGYLHSLRTLAVDEN 369



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 130/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+  ELP  + ++  L+ L +  N++ 
Sbjct: 198 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQ 257

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 258 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 317

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 318 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 376

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS
Sbjct: 377 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 436

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 437 DNQSKALIP 445



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 122/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 56  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 93

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 94  QIEELPKQLFNCQALRKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 152

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L               
Sbjct: 153 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL--------------- 197

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                  ++L +L+L  N L  LP  + K+  L +L L  N           G  P +L 
Sbjct: 198 -------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------GELPEVLD 241

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            +++                            +EL ++   L  +P  I +   +  LD+
Sbjct: 242 QIQNL---------------------------RELWMDNNALQVLPGSIGKLKMLVYLDM 274

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  ++S C +L+
Sbjct: 275 SKNRIETVDMDISGCEALE 293


>gi|421130781|ref|ZP_15590973.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410357884|gb|EKP05089.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 312

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/240 (37%), Positives = 126/240 (52%), Gaps = 2/240 (0%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           VLN+S  KL+ LP  IG+L  L+SL +S N +  +P EI     L   D S NQL  LP+
Sbjct: 52  VLNLSGQKLTSLPKEIGQLKNLQSLYLSDNQLTILPKEIVELQNLEHLDLSENQLVILPN 111

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +GR  NL       N +T+LP+++     +  L    N+L +L    I     L  L  
Sbjct: 112 EIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKE-IGQLENLENLNL 170

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S+N L  +P+ IG L  L  L L  N+++++P+ I    +L E  +  N L  LP  +G+
Sbjct: 171 SENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGR 230

Query: 252 LSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L TLDLH N+L     E  QL+ L  L+L NN L  LP EI ++  L+ L L  NPL
Sbjct: 231 LQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIEQLQNLQDLDLLMNPL 290



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 116/236 (49%), Gaps = 14/236 (5%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           LNLS + L  +P E+              +  +LQ L L+ N +  L +++  L  L  L
Sbjct: 53  LNLSGQKLTSLPKEI-------------GQLKNLQSLYLSDNQLTILPKEIVELQNLEHL 99

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++S N+L  LP  IG L  L+SLD+  N +  +P EIG    L       N+L  LP  +
Sbjct: 100 DLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEI 159

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G+  NL +   S N +T++P+++     + +L + GN+L  L N  I     L EL    
Sbjct: 160 GQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNE-IGQLRNLQELNLKW 218

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
           N L  +P+ IG L  L  LDLH+NR+  +P       SL +  + NN L  LP E+
Sbjct: 219 NQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEI 274



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 94/180 (52%), Gaps = 7/180 (3%)

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
           R LNLS  K     +TSLP+++     +  L +  N+LT+L    I     L  L  S+N
Sbjct: 51  RVLNLSGQK-----LTSLPKEIGQLKNLQSLYLSDNQLTILPKE-IVELQNLEHLDLSEN 104

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L  +P  IG L  L  LDL++N++ ++P  I    +L   +   N L+ LP E+G+L  
Sbjct: 105 QLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLEN 164

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  L+L  N+L     E  QL+ L  L LS N L  LP EIG++  L++L L  N L TL
Sbjct: 165 LENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTL 224



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 40/178 (22%)

Query: 275 LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLV---------------- 318
           L + VL+LS   L+ LP EIG++  L+ L L+ N L  L   +V                
Sbjct: 48  LDVRVLNLSGQKLTSLPKEIGQLKNLQSLYLSDNQLTILPKEIVELQNLEHLDLSENQLV 107

Query: 319 ----------NGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL----SL 364
                     N  +  L K   + LP+ E  +     + L +   RL++  KE+    +L
Sbjct: 108 ILPNEIGRLKNLQSLDLYKNKLTTLPK-EIGQLQNL-QMLWSPENRLAILPKEIGQLENL 165

Query: 365 EGMNLS-----AIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ---VKFSDLVT 414
           E +NLS      +P EI +   + +L LS N +  LP E+    +LQ   +K++ LVT
Sbjct: 166 ENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVT 223


>gi|403257784|ref|XP_003921474.1| PREDICTED: leucine-rich repeat-containing protein 7 [Saimiri
           boliviensis boliviensis]
          Length = 1537

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 151/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           + + L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 195 EFSELP-EVLDQIQNLRELWMDNNALQILPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 314 LPSTIGYLHSLRTLAVDEN 332



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+ SELP  + ++  L+ L +  N++ 
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQ 220

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 221 ILPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 280

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 281 LKVDDNQLTILPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 339

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 400 DNQSKALIP 408



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 122/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 19  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 56

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 57  QIEELPKQLFNCQALRKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 115

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L               
Sbjct: 116 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL--------------- 160

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                  ++L +L+L  N L  LP  + K+  L +L L  N                   
Sbjct: 161 -------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF----------------- 196

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
              S LPE            ++     L    +EL ++   L  +P  I +   +  LD+
Sbjct: 197 ---SELPE------------VLDQIQNL----RELWMDNNALQILPGSIGKLKMLVYLDM 237

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  ++S C +L+
Sbjct: 238 SKNRIETVDMDISGCEALE 256


>gi|125533033|gb|EAY79598.1| hypothetical protein OsI_34739 [Oryza sativa Indica Group]
          Length = 543

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 137/278 (49%), Gaps = 4/278 (1%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           + IE L   L  L  +T L++S N++  LP+ IG L  L  LD+  N ++ +PD  G  +
Sbjct: 227 DQIEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDAFGELS 286

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L+  D  +NQLK LPSS G   +L++   S+N + +LP+ L   + + +L VE N+L  
Sbjct: 287 NLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRRLIVETNELEE 346

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I S T L EL    N L  +PE IG L +L  L LH NRI  +P+++     L E
Sbjct: 347 LPYT-IGSCTSLVELRLDFNQLKALPEAIGKLEKLEILTLHYNRIKGLPTTVGSLSRLRE 405

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSN--QLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
             +  N +  +P  +   + L  L+L  N   L+        L  L  LD+S+N +  LP
Sbjct: 406 LDVSFNEVEVIPENICFATSLVKLNLSRNFADLRALPKSIGNLEMLEELDISSNQIRVLP 465

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                ++ LR       PL      +V     A++KY+
Sbjct: 466 DSFRCLSRLRVFHADETPLEFPPREVVKLGAQAVVKYM 503



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 124/255 (48%), Gaps = 4/255 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           D+ +L L+ N I  L   + +L  LT L++  N+L  LP A GEL  L  LD+  N +  
Sbjct: 241 DVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDAFGELSNLIDLDLHANQLKS 300

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P   G+ T+L   D SSN LK LP  LG+  NL       N +  LP  +  C+ + +L
Sbjct: 301 LPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRRLIVETNELEELPYTIGSCTSLVEL 360

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+L  L    I     L  L    N + G+P T+GSLSRL  LD+  N +  IP +
Sbjct: 361 RLDFNQLKALPEA-IGKLEKLEILTLHYNRIKGLPTTVGSLSRLRELDVSFNEVEVIPEN 419

Query: 226 ISGCCSLAEFYMGNNA--LSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDL 282
           I    SL +  +  N   L ALP  +G L  L  LD+ SNQ++       C  RL V   
Sbjct: 420 ICFATSLVKLNLSRNFADLRALPKSIGNLEMLEELDISSNQIRVLPDSFRCLSRLRVFHA 479

Query: 283 SNNSLSGLPPEIGKM 297
               L   P E+ K+
Sbjct: 480 DETPLEFPPREVVKL 494



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 137/311 (44%), Gaps = 57/311 (18%)

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           + I  +P  +G    + + D S N++  LPS++G    L+     +N + +LP+   + S
Sbjct: 227 DQIEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDAFGELS 286

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            +  LD+  N+L  L ++   + T L  L  S N+L  +P+ +G L+ L RL +  N + 
Sbjct: 287 NLIDLDLHANQLKSLPSSF-GNLTSLANLDLSSNMLKALPDCLGKLANLRRLIVETNELE 345

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 280
            +P +I  C SL E  +  N L ALP  +GKL KL  L LH N++K              
Sbjct: 346 ELPYTIGSCTSLVELRLDFNQLKALPEAIGKLEKLEILTLHYNRIK-------------- 391

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
                   GLP  +G ++ LR+L ++ N +  +                    PEN    
Sbjct: 392 --------GLPTTVGSLSRLRELDVSFNEVEVI--------------------PEN---- 419

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                   I  AT  S+    LS    +L A+P  I     + +LD+S N I+ LP    
Sbjct: 420 --------ICFAT--SLVKLNLSRNFADLRALPKSIGNLEMLEELDISSNQIRVLPDSFR 469

Query: 401 SCASLQVKFSD 411
             + L+V  +D
Sbjct: 470 CLSRLRVFHAD 480



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 108/217 (49%), Gaps = 3/217 (1%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + E  +L  L L  N ++ L     NL  L  L++S N L  LP  +G+L  L+ L V
Sbjct: 280 DAFGELSNLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRRLIV 339

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N + ++P  IGS T+LV+     NQLK LP ++G+   L       N I  LP  +  
Sbjct: 340 ETNELEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLEKLEILTLHYNRIKGLPTTVGS 399

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL--LNGMPETIGSLSRLIRLDLHQ 216
            S++ +LDV  N++ V+  N I   T L +L  S+N   L  +P++IG+L  L  LD+  
Sbjct: 400 LSRLRELDVSFNEVEVIPEN-ICFATSLVKLNLSRNFADLRALPKSIGNLEMLEELDISS 458

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N+I  +P S      L  F+     L   P E+ KL 
Sbjct: 459 NQIRVLPDSFRCLSRLRVFHADETPLEFPPREVVKLG 495


>gi|161078264|ref|NP_001097774.1| flyers-cup, isoform E [Drosophila melanogaster]
 gi|158030248|gb|ABW08664.1| flyers-cup, isoform E [Drosophila melanogaster]
          Length = 620

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 176/421 (41%), Gaps = 79/421 (18%)

Query: 37  EGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL----------------------- 73
           E D WW  V L  L L+ N +  +   + NL  LTVL                       
Sbjct: 75  EEDAWWNQVPLNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRL 134

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           NVSHNKLS+LP A+  L  L+ L++S+N  +++  +I     L   D   N ++ LP  +
Sbjct: 135 NVSHNKLSQLPRAMYSLPELRHLNISYNEFVELNPDISDLHMLEFLDGGHNNIQSLPGGI 194

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
           G  + L+      N I  LP DL +   + K+D+  N LT L                  
Sbjct: 195 GFLVRLTALLLPYNHIKELPPDLVNMRSLQKIDLMHNDLTSL------------------ 236

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL-GKL 252
                 PE +G L +L  L L  N IL +P    G  +L E +  NN +  +P  +   L
Sbjct: 237 ------PEDMGLLRKLDCLYLQHNDILELP-EFEGNEALNELHASNNFIKIIPKAMCSNL 289

Query: 253 SKLGTLDLHSNQLKEYCVE-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLR 311
             L  LDL  N++ E   E      L+ LD+SNN++S LP  +  +  L  L + GNP++
Sbjct: 290 PHLKILDLRDNKITELPDELCLLRNLNRLDVSNNTISVLPVTLSSLAHLISLQVEGNPIK 349

Query: 312 TLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVT------------- 358
           T+R  ++   T  +LK L  R       E      D  + +  +SVT             
Sbjct: 350 TIRRDILQCGTTRILKTLHDRAVAKAKEEGGGV--DDASTSAGISVTRLRGGQMDDGDIP 407

Query: 359 -----------SKELSLEGMNLSAIPSEIWEAGE---ITKLDLSRNSIQELPPELSSCAS 404
                      ++ L++    L+++P ++++      +  +D +RN +  LP  L     
Sbjct: 408 GNFPDRYKLRHTRTLAVNLEELTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKD 467

Query: 405 L 405
           L
Sbjct: 468 L 468



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 5/191 (2%)

Query: 149 ITSLPEDLADCSK---MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGS 205
           +TS+P+ +   ++   +  +D   N+L+ L N L     ++TEL+ S N++  +P+ I  
Sbjct: 429 LTSVPDQVFQIARDEGVHVVDFARNQLSTLPNGLQHMKDLVTELVLSNNVIGYVPQFISQ 488

Query: 206 LSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
            +R+  L+L  N +  +P+      +L E  + NN    +P  + +L  L  L    N +
Sbjct: 489 FTRISFLNLSNNLLNDLPTEFGVLNTLRELNIANNRFPCIPNCVYELQGLEILIASENHI 548

Query: 266 KEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTP 323
           K   V   Q   RLS LDL NN +  +PP +G +T +  L L GNP R  R  ++   T 
Sbjct: 549 KMLNVSGLQNMRRLSTLDLRNNDIETVPPILGNLTNITHLELVGNPFRQPRHQILMKGTD 608

Query: 324 ALLKYLRSRLP 334
           A++ YLR R+P
Sbjct: 609 AIMSYLRDRIP 619



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 18/155 (11%)

Query: 255 LGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
           L  LDL SN L     +   L+ L+VL L +N+L  LPPEIGK+  L +L ++ N L  L
Sbjct: 85  LNNLDLSSNTLTHISPKIENLQSLTVLTLHDNALVELPPEIGKLEKLVRLNVSHNKLSQL 144

Query: 314 RSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM--NLSA 371
             ++ + P    L++L   +  NE  E +    DL  +            L+G   N+ +
Sbjct: 145 PRAMYSLPE---LRHLN--ISYNEFVELNPDISDLHMLEF----------LDGGHNNIQS 189

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           +P  I     +T L L  N I+ELPP+L +  SLQ
Sbjct: 190 LPGGIGFLVRLTALLLPYNHIKELPPDLVNMRSLQ 224


>gi|19225010|gb|AAL86486.1|AC077693_25 putative leucine-rich repeat protein [Oryza sativa Japonica Group]
 gi|31433621|gb|AAP55113.1| Leucine Rich Repeat family protein, expressed [Oryza sativa
           Japonica Group]
 gi|78709035|gb|ABB48010.1| Leucine Rich Repeat family protein, expressed [Oryza sativa
           Japonica Group]
 gi|125575769|gb|EAZ17053.1| hypothetical protein OsJ_32547 [Oryza sativa Japonica Group]
 gi|215734963|dbj|BAG95685.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 543

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 137/278 (49%), Gaps = 4/278 (1%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           + IE L   L  L  +T L++S N++  LP+ IG L  L  LD+  N ++ +PD  G  +
Sbjct: 227 DQIEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDAFGELS 286

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L+  D  +NQLK LPSS G   +L++   S+N + +LP+ L   + + +L VE N+L  
Sbjct: 287 NLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRRLIVETNELEE 346

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I S T L EL    N L  +PE IG L +L  L LH NRI  +P+++     L E
Sbjct: 347 LPYT-IGSCTSLVELRLDFNQLKALPEAIGKLEKLEILTLHYNRIKGLPTTVGSLSRLRE 405

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSN--QLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
             +  N +  +P  +   + L  L+L  N   L+        L  L  LD+S+N +  LP
Sbjct: 406 LDVSFNEVEVIPENICFATSLVKLNLSRNFADLRALPKSIGNLEMLEELDISSNQIRVLP 465

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                ++ LR       PL      +V     A++KY+
Sbjct: 466 DSFRCLSRLRVFHADETPLEFPPREVVKLGAQAVVKYM 503



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 124/255 (48%), Gaps = 4/255 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           D+ +L L+ N I  L   + +L  LT L++  N+L  LP A GEL  L  LD+  N +  
Sbjct: 241 DVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDAFGELSNLIDLDLHANQLKS 300

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P   G+ T+L   D SSN LK LP  LG+  NL       N +  LP  +  C+ + +L
Sbjct: 301 LPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRRLIVETNELEELPYTIGSCTSLVEL 360

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+L  L    I     L  L    N + G+P T+GSLSRL  LD+  N +  IP +
Sbjct: 361 RLDFNQLKALPEA-IGKLEKLEILTLHYNRIKGLPTTVGSLSRLRELDVSFNEVEVIPEN 419

Query: 226 ISGCCSLAEFYMGNNA--LSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDL 282
           I    SL +  +  N   L ALP  +G L  L  LD+ SNQ++       C  RL V   
Sbjct: 420 ICFATSLVKLNLSRNFADLRALPKSIGNLEMLEELDISSNQIRVLPDSFRCLSRLRVFHA 479

Query: 283 SNNSLSGLPPEIGKM 297
               L   P E+ K+
Sbjct: 480 DETPLEFPPREVVKL 494



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 137/311 (44%), Gaps = 57/311 (18%)

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           + I  +P  +G    + + D S N++  LPS++G    L+     +N + +LP+   + S
Sbjct: 227 DQIEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDAFGELS 286

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            +  LD+  N+L  L ++   + T L  L  S N+L  +P+ +G L+ L RL +  N + 
Sbjct: 287 NLIDLDLHANQLKSLPSSF-GNLTSLANLDLSSNMLKALPDCLGKLANLRRLIVETNELE 345

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 280
            +P +I  C SL E  +  N L ALP  +GKL KL  L LH N++K              
Sbjct: 346 ELPYTIGSCTSLVELRLDFNQLKALPEAIGKLEKLEILTLHYNRIK-------------- 391

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
                   GLP  +G ++ LR+L ++ N +  +                    PEN    
Sbjct: 392 --------GLPTTVGSLSRLRELDVSFNEVEVI--------------------PEN---- 419

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                   I  AT  S+    LS    +L A+P  I     + +LD+S N I+ LP    
Sbjct: 420 --------ICFAT--SLVKLNLSRNFADLRALPKSIGNLEMLEELDISSNQIRVLPDSFR 469

Query: 401 SCASLQVKFSD 411
             + L+V  +D
Sbjct: 470 CLSRLRVFHAD 480



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 108/217 (49%), Gaps = 3/217 (1%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + E  +L  L L  N ++ L     NL  L  L++S N L  LP  +G+L  L+ L V
Sbjct: 280 DAFGELSNLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRRLIV 339

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N + ++P  IGS T+LV+     NQLK LP ++G+   L       N I  LP  +  
Sbjct: 340 ETNELEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLEKLEILTLHYNRIKGLPTTVGS 399

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL--LNGMPETIGSLSRLIRLDLHQ 216
            S++ +LDV  N++ V+  N I   T L +L  S+N   L  +P++IG+L  L  LD+  
Sbjct: 400 LSRLRELDVSFNEVEVIPEN-ICFATSLVKLNLSRNFADLRALPKSIGNLEMLEELDISS 458

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N+I  +P S      L  F+     L   P E+ KL 
Sbjct: 459 NQIRVLPDSFRCLSRLRVFHADETPLEFPPREVVKLG 495


>gi|417406440|gb|JAA49878.1| Putative cytoskeletal regulator flightless-i [Desmodus rotundus]
          Length = 1417

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 176/402 (43%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD   N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDFSKNNIEMVEEGISACE-NLQDLILSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              L+++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LVSI--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 148/315 (46%), Gaps = 46/315 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   + + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +LI S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGNPLRTL 313
            L  + L+ N  + L
Sbjct: 392 QLTAMWLSDNQSKPL 406



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 120/247 (48%), Gaps = 2/247 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L + +  L  L  L++  N+ +E+P  + +L+ LK   +  N +  I
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFI 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IGS   L   D S N ++ +   +  C NL D   S+N +  LPE +     ++ L 
Sbjct: 223 PGFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLPETIGSLKNVTTLK 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L ++ I     + EL  S N +  +P +IG L+ +       N +  +P  I
Sbjct: 283 IDENQLMYLPDS-IGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               ++   ++ +N L  LP E+G + KL  ++L  N+LK       +L +L+ + LS+N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 286 SLSGLPP 292
               L P
Sbjct: 402 QSKPLIP 408


>gi|417406386|gb|JAA49853.1| Putative cytoskeletal regulator flightless-i [Desmodus rotundus]
          Length = 1369

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 174/402 (43%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD   N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDFSKNNIEMVEEGISACE-NLQDLILSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                                       V+ +EL     
Sbjct: 286 NQLMYLPDSIGG------------------------------------LVSIEELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 146/310 (47%), Gaps = 46/310 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   + + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +LI S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGN 308
            L  + L+ N
Sbjct: 392 QLTAMWLSDN 401



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 120/247 (48%), Gaps = 2/247 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L + +  L  L  L++  N+ +E+P  + +L+ LK   +  N +  I
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFI 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IGS   L   D S N ++ +   +  C NL D   S+N +  LPE +     ++ L 
Sbjct: 223 PGFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLPETIGSLKNVTTLK 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L ++ I     + EL  S N +  +P +IG L+ +       N +  +P  I
Sbjct: 283 IDENQLMYLPDS-IGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               ++   ++ +N L  LP E+G + KL  ++L  N+LK       +L +L+ + LS+N
Sbjct: 342 GSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 286 SLSGLPP 292
               L P
Sbjct: 402 QSKPLIP 408


>gi|441637621|ref|XP_003260231.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7 [Nomascus leucogenys]
          Length = 1578

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 150/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 65  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 112

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 113 SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 172

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 173 TQLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 232

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +   L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 233 EFGELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 291

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 292 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 351

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 352 LPSTIGYLHSLRTLAVDEN 370



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 2/247 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L  N+++ L + +  L  L  L++ +N+  ELP  + ++  L+ L +  N++  +
Sbjct: 201 LRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVL 260

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ L 
Sbjct: 261 PGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLK 320

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P  I
Sbjct: 321 VDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREI 379

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
             C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS+N
Sbjct: 380 GSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLSDN 439

Query: 286 SLSGLPP 292
               L P
Sbjct: 440 QSKALIP 446



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 122/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 57  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 94

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 95  QIEELPKQLFNCQALRKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 153

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L+KL            
Sbjct: 154 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKL------------ 201

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                      +L+L  N L  LP  + K+  L +L L  N           G  P +L 
Sbjct: 202 ----------RILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------GELPEVLD 242

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            +++                            +EL ++   L  +P  I +   +  LD+
Sbjct: 243 QIQNL---------------------------RELWMDNNALQVLPGSIGKLKMLVYLDM 275

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  ++S C +L+
Sbjct: 276 SKNRIETVDMDISGCEALE 294


>gi|329663814|ref|NP_001193082.1| protein LAP2 [Bos taurus]
 gi|296475860|tpg|DAA17975.1| TPA: erbb2 interacting protein isoform 1 [Bos taurus]
          Length = 1372

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 176/402 (43%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDISKNNIEMVEEGISGCE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              L+++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LVSI--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            L A+PS I +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 310 ELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 24/199 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L ++ NNIE ++E +     L  L +S N L +LP  IG L  + +L +  N +M +
Sbjct: 232 LTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYL 291

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IG   ++ + DCS N+L+ LPSS+G+  N+  F A +N +  LP +           
Sbjct: 292 PDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPE----------- 340

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                        I SW  +T L    N L  +PE +G + +L  ++L  NR+ ++P S 
Sbjct: 341 -------------IGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 227 SGCCSLAEFYMGNNALSAL 245
           +    L   ++ +N    L
Sbjct: 388 TKLQQLTAMWLSDNQSKPL 406



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 4/146 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L+L+ N++++L E + +L  +T L +  N+L  LP +IG L  ++ LD SFN +  
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEA 313

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG  T +  F    N L++LP  +G   N++     +N + +LPE++ D  K+  +
Sbjct: 314 LPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVI 373

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIA 191
           ++  N+L     NL  S+T L +L A
Sbjct: 374 NLSDNRL----KNLPFSFTKLQQLTA 395


>gi|402871711|ref|XP_003899797.1| PREDICTED: protein LAP2 isoform 4 [Papio anubis]
          Length = 1345

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 177/402 (44%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLF 351



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 146/311 (46%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 2/247 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L + +  L  L  L++  N+ +E+P  + +L  LK   +  N +  I
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IGS   L   D S N ++ +   +  C NL D   S+N +  LPE +     ++ L 
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLK 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L ++ I     + EL  S N +  +P +IG L+ +       N +  +P  I
Sbjct: 283 IDENQLMYLPDS-IGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               ++   ++ +N L  LP E+G + KL  ++L  N+LK       +L +L+ + LS+N
Sbjct: 342 GSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 286 SLSGLPP 292
               L P
Sbjct: 402 QSKPLIP 408



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 42/240 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S LP    ++  L +
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L                  A L++L    P N                T+L +    L
Sbjct: 143 LYLND----------------AFLEFL----PAN------------FGRLTKLQI----L 166

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG 422
            L    L  +P  +    ++ +LDL  N   E+P  L   + L+  + D   N+ + I G
Sbjct: 167 ELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD--ANRLTFIPG 224


>gi|395825406|ref|XP_003785926.1| PREDICTED: protein LAP2 isoform 3 [Otolemur garnettii]
          Length = 1303

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 176/402 (43%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMIEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S + G T                                   + +EL     
Sbjct: 286 NQLMYLPDS-IGGLT-----------------------------------SIEELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS + +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 157/344 (45%), Gaps = 50/344 (14%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP    +L  L  L ++   + 
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P   G  T L   +   NQLK LP ++ R   L      +N  T +PE L   S + +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 165 LDVEGNKLTVL----------------SNNL------IASWTMLTELIASKNLLNGMPET 202
             ++GN+LT +                 NN+      I++   L +L+ S N L  +PET
Sbjct: 212 FWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPET 271

Query: 203 IGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMGN 239
           IGSL  +  L + +N+++ +P SI G  S+ E                       F   +
Sbjct: 272 IGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADH 331

Query: 240 NALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMT 298
           N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+ 
Sbjct: 332 NYLQQLPPEIGSWKNITVLFLHSNKLEILPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQ 391

Query: 299 TLRKLLLTGNPLRTL----RSSLVNGPTPALLKYLRSRLPENED 338
            L  + L+ N  + L    + +        L  Y+  + P  ED
Sbjct: 392 QLTAMWLSDNQSKPLIPLQKETDAETQKMVLTNYMFPQQPRTED 435


>gi|355698275|gb|EHH28823.1| hypothetical protein EGK_19345, partial [Macaca mulatta]
          Length = 1612

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 153/326 (46%), Gaps = 48/326 (14%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           ++  ++L+KL L+ N I++L  ++ N   L  L+VS N + E+P +I     L+  D S 
Sbjct: 4   FFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSG 63

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + ++PD      +L     +   L+ LP  +G   NL   +   N + SLP  L+   
Sbjct: 64  NPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV 123

Query: 161 KMSKLDVEGNKLTVLSNNLIA--------------------------------SWTMLTE 188
           K+ +LD+ GN L VL + L A                                S   L E
Sbjct: 124 KLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEE 183

Query: 189 LIA-------------SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
           L A             S+NLL  +P+ IG L +L  L + QNR+  +  +I  C +L+E 
Sbjct: 184 LPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSEL 243

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPE 293
            +  N L ALP  LGKL+KL  L++  N L+    E   C + LSVL L +N L+ LPPE
Sbjct: 244 ILTENLLMALPRSLGKLTKLTNLNVDRNHLETLPPEIGGC-VALSVLSLRDNRLAVLPPE 302

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVN 319
           +     L  L + GN L++L  +L +
Sbjct: 303 LAHTAELHVLDVAGNRLQSLPFALTH 328



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 123 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 182

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 183 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 241

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 242 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLETLPP 278

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 279 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTHLNLKALWLAE 338

Query: 285 N 285
           N
Sbjct: 339 N 339



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 154/318 (48%), Gaps = 42/318 (13%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDFKASNNCIT 150
           L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C  L ++DF  S N ++
Sbjct: 10  LRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADF--SGNPLS 67

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
            LP+       ++ L +    L  L  + + +   L  L   +NLL  +P ++  L +L 
Sbjct: 68  RLPDGFTQLRSLAHLALNDVSLQALPGD-VGNLANLVTLELRENLLKSLPASLSFLVKLE 126

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L  LD+  N+L+E   
Sbjct: 127 QLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 186

Query: 271 E-ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E    + L+ L LS N L  LP  IG++  L                       ++LK  
Sbjct: 187 ELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-----------------------SILKVD 223

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           ++RL   E +EA    E+L            EL L    L A+P  + +  ++T L++ R
Sbjct: 224 QNRL--CEVTEAIGDCENL-----------SELILTENLLMALPRSLGKLTKLTNLNVDR 270

Query: 390 NSIQELPPELSSCASLQV 407
           N ++ LPPE+  C +L V
Sbjct: 271 NHLETLPPEIGGCVALSV 288


>gi|332233712|ref|XP_003266047.1| PREDICTED: protein LAP2 isoform 2 [Nomascus leucogenys]
          Length = 1301

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 177/402 (44%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   +       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 159/345 (46%), Gaps = 52/345 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN---PLRTLRSSLVNGPTPALL-KYLRSRLPENED 338
             L  + L+ N   PL  L+    +     +L  Y+  + P  ED
Sbjct: 391 QQLTAMWLSDNQSKPLIPLQKETDSETQKMVLTNYMFPQQPRTED 435



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 42/240 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LPA +  L  L  LD+  N ++E+   ++ C++ L++++ S N +S LP    ++  L +
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L                  A L++L    P N                T+L +    L
Sbjct: 143 LYLND----------------AFLEFL----PAN------------FGRLTKLQI----L 166

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG 422
            L    L  +P  +    ++ +LDL  N   E+P  L   + L+  + D   N+ + I G
Sbjct: 167 ELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD--ANRLTFIPG 224


>gi|16904383|ref|NP_065845.1| leucine-rich repeat-containing protein 7 [Homo sapiens]
 gi|114557139|ref|XP_513481.2| PREDICTED: leucine-rich repeat-containing protein 7 isoform 3 [Pan
           troglodytes]
 gi|426329990|ref|XP_004026012.1| PREDICTED: leucine-rich repeat-containing protein 7 [Gorilla
           gorilla gorilla]
 gi|50401129|sp|Q96NW7.1|LRRC7_HUMAN RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
 gi|16755893|gb|AAL28133.1|AF434715_1 densin-180 [Homo sapiens]
 gi|119626867|gb|EAX06462.1| leucine rich repeat containing 7, isoform CRA_b [Homo sapiens]
          Length = 1537

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 150/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +   L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 195 EFGELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 314 LPSTIGYLHSLRTLAVDEN 332



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 130/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+  ELP  + ++  L+ L +  N++ 
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQ 220

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 280

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 281 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 339

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 400 DNQSKALIP 408



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 122/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 19  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 56

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 57  QIEELPKQLFNCQALRKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 115

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L               
Sbjct: 116 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL--------------- 160

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                  ++L +L+L  N L  LP  + K+  L +L L  N           G  P +L 
Sbjct: 161 -------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------GELPEVLD 204

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            +++                            +EL ++   L  +P  I +   +  LD+
Sbjct: 205 QIQNL---------------------------RELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  ++S C +L+
Sbjct: 238 SKNRIETVDMDISGCEALE 256


>gi|440908498|gb|ELR58508.1| Protein LAP2 [Bos grunniens mutus]
          Length = 1412

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 176/402 (43%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDISKNNIEMVEEGISGCE-NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              L+++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LVSI--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            L A+PS I +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 310 ELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 24/199 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L ++ NNIE ++E +     L  L +S N L +LP  IG L  + +L +  N +M +
Sbjct: 232 LTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYL 291

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IG   ++ + DCS N+L+ LPSS+G+  N+  F A +N +  LP +           
Sbjct: 292 PDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPE----------- 340

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                        I SW  +T L    N L  +PE +G + +L  ++L  NR+ ++P S 
Sbjct: 341 -------------IGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 227 SGCCSLAEFYMGNNALSAL 245
           +    L   ++ +N    L
Sbjct: 388 TKLQQLTAMWLSDNQSKPL 406



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 83/146 (56%), Gaps = 4/146 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L+L+ N++++L E + +L  +T L +  N+L  LP +IG L  ++ LD SFN +  
Sbjct: 254 NLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEA 313

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG  T +  F    N L++LP  +G   N++     +N + +LPE++ D  K+  +
Sbjct: 314 LPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVI 373

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIA 191
           ++  N+L     NL  S+T L +L A
Sbjct: 374 NLSDNRL----KNLPFSFTKLQQLTA 395


>gi|302129649|ref|NP_001180472.1| protein LAP2 [Danio rerio]
          Length = 1330

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 150/323 (46%), Gaps = 37/323 (11%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++ +F++            L++L L  N IE+L + L N  L
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-SFEKT-----------LEELYLDANQIEELPKQLFNCQL 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKE- 128
           L  L++  N L+ LP  I  L  L+ LDVS N I + P+ I +   L   + S N + + 
Sbjct: 71  LYRLSLPDNDLTVLPPGIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKL 130

Query: 129 ----------------------LPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
                                 LP+S GR   L   +   N +  LP+ +   +++ +LD
Sbjct: 131 PEGFTQLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHKLTQLERLD 190

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+ T +   ++   T + EL    N L  +P  IG+L +L  LD+ +N +  +   I
Sbjct: 191 LGSNEFTEVP-EVLEQLTGIRELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVEMVEEQI 249

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
           SGC +L +  + NNAL+ LP  +G L KL TL +  NQL         L  L  LD S N
Sbjct: 250 SGCENLQDLLLSNNALTQLPGSIGSLKKLSTLKVDDNQLMYLPDTIGGLSHLDELDCSFN 309

Query: 286 SLSGLPPEIGKMTTLRKLLLTGN 308
            +  LP  IG+   LR      N
Sbjct: 310 EIEALPSSIGQCVNLRTFAADHN 332



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 25/263 (9%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L + +  L  L  L++  N+ +E+P  + +L  ++ L +  N +  +
Sbjct: 163 LQILELRENQLKMLPKSMHKLTQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTFV 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IG+   L   D S N ++ +   +  C NL D   SNN +T LP  +    K+S L 
Sbjct: 223 PGMIGALKQLSYLDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGSLKKLSTLK 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V+ N+L  L                        P+TIG LS L  LD   N I ++PSSI
Sbjct: 283 VDDNQLMYL------------------------PDTIGGLSHLDELDCSFNEIEALPSSI 318

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
             C +L  F   +N L+ +P E+G L  +  L LHSN+L+    E   + +L V++LS+N
Sbjct: 319 GQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLENLPEEMGDMQKLKVINLSDN 378

Query: 286 SLSGLPPEIGKMTTLRKLLLTGN 308
            L  LP    K+  +  + L+ N
Sbjct: 379 KLRNLPYSFTKLNQMTAMWLSEN 401



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 4/146 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L+L++N + +L   + +L  L+ L V  N+L  LP  IG L  L  LD SFN I  
Sbjct: 254 NLQDLLLSNNALTQLPGSIGSLKKLSTLKVDDNQLMYLPDTIGGLSHLDELDCSFNEIEA 313

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG    L  F    N L ++P  +G   N++     +N + +LPE++ D  K+  +
Sbjct: 314 LPSSIGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLENLPEEMGDMQKLKVI 373

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIA 191
           ++  NKL     NL  S+T L ++ A
Sbjct: 374 NLSDNKL----RNLPYSFTKLNQMTA 395



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 130/319 (40%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE   + +LD S  S+ ++P EI S      F+ +                L +     N
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFS------FEKT----------------LEELYLDAN 56

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + +L +  N LTVL    IA+   L EL  SKN +   PE I +  
Sbjct: 57  QIEELPKQLFNCQLLYRLSLPDNDLTVLPPG-IANLINLRELDVSKNGIQEFPENIKNCK 115

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   SL++ Y+ +  L  LPA  G+L+KL            
Sbjct: 116 VLAIVEASVNPISKLPEGFTQLLSLSQLYLNDAFLEFLPASFGRLTKL------------ 163

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                      +L+L  N L  LP  + K+T L +L L  N                   
Sbjct: 164 ----------QILELRENQLKMLPKSMHKLTQLERLDLGSN------------------- 194

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
                    E +E     E L  +        +EL ++G  L+ +P  I    +++ LD+
Sbjct: 195 ---------EFTEVPEVLEQLTGI--------RELWMDGNKLTFVPGMIGALKQLSYLDV 237

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N+++ +  ++S C +LQ
Sbjct: 238 SKNNVEMVEEQISGCENLQ 256


>gi|402871707|ref|XP_003899795.1| PREDICTED: protein LAP2 isoform 2 [Papio anubis]
          Length = 1418

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 177/402 (44%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLF 351



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 148/316 (46%), Gaps = 48/316 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGNPLRTL 313
             L  + L+ N  + L
Sbjct: 391 QQLTAMWLSDNQSKPL 406



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 2/247 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L + +  L  L  L++  N+ +E+P  + +L  LK   +  N +  I
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IGS   L   D S N ++ +   +  C NL D   S+N +  LPE +     ++ L 
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLK 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L ++ I     + EL  S N +  +P +IG L+ +       N +  +P  I
Sbjct: 283 IDENQLMYLPDS-IGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               ++   ++ +N L  LP E+G + KL  ++L  N+LK       +L +L+ + LS+N
Sbjct: 342 GSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 286 SLSGLPP 292
               L P
Sbjct: 402 QSKPLIP 408



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 42/240 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S LP    ++  L +
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L                  A L++L    P N                T+L +    L
Sbjct: 143 LYLND----------------AFLEFL----PAN------------FGRLTKLQI----L 166

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG 422
            L    L  +P  +    ++ +LDL  N   E+P  L   + L+  + D   N+ + I G
Sbjct: 167 ELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD--ANRLTFIPG 224


>gi|365837917|ref|ZP_09379274.1| leucine Rich repeat-containing domain protein [Hafnia alvei ATCC
           51873]
 gi|364561108|gb|EHM39022.1| leucine Rich repeat-containing domain protein [Hafnia alvei ATCC
           51873]
          Length = 297

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 134/253 (52%), Gaps = 2/253 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L + +N +    E +  L  L VLN+S N+++++P +IG+L  L+ LD+  N + ++
Sbjct: 38  LTGLSVYNNQLSSYPEQIGMLSELQVLNISCNQMAKIPDSIGQLRALEMLDLGHNRLSEL 97

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +G  T L+    S+N L ++P++     NL     ++N +T++PE +   S + +L 
Sbjct: 98  PDTMGRLTQLIYLYLSNNSLTDIPATFSALRNLRYLNITDNHLTAIPEAVFAMSALEELR 157

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  NK++VL+   I     L EL    N  +  P++IG L++L  LD+  NRI SIP S 
Sbjct: 158 LYNNKISVLAEK-IGDLKNLQELHLMNNHFSQFPDSIGQLTQLRVLDISGNRIKSIPDSF 216

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
           +    L +     N LS +P  +  L+ L TLDL +N L        +L+ L  LDL  N
Sbjct: 217 AQLNHLQDLNFRFNNLSEVPGTIAALTHLQTLDLRANNLTSLPESIQELKNLKRLDLRWN 276

Query: 286 SLSGLPPEIGKMT 298
           S +  P ++  + 
Sbjct: 277 SFTTYPEQLASLV 289



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 109/212 (51%), Gaps = 1/212 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L+ L L HN + +L + +  L  L  L +S+N L+++PA    L  L+ L+++ N +  I
Sbjct: 84  LEMLDLGHNRLSELPDTMGRLTQLIYLYLSNNSLTDIPATFSALRNLRYLNITDNHLTAI 143

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+ + + +AL +    +N++  L   +G   NL +    NN  +  P+ +   +++  LD
Sbjct: 144 PEAVFAMSALEELRLYNNKISVLAEKIGDLKNLQELHLMNNHFSQFPDSIGQLTQLRVLD 203

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           + GN++  + ++  A    L +L    N L+ +P TI +L+ L  LDL  N + S+P SI
Sbjct: 204 ISGNRIKSIPDSF-AQLNHLQDLNFRFNNLSEVPGTIAALTHLQTLDLRANNLTSLPESI 262

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
               +L    +  N+ +  P +L  L K G L
Sbjct: 263 QELKNLKRLDLRWNSFTTYPEQLASLVKQGCL 294



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 17/267 (6%)

Query: 139 LSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG 198
           L+     NN ++S PE +   S++  L++  N++  + ++ I     L  L    N L+ 
Sbjct: 38  LTGLSVYNNQLSSYPEQIGMLSELQVLNISCNQMAKIPDS-IGQLRALEMLDLGHNRLSE 96

Query: 199 MPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTL 258
           +P+T+G L++LI L L  N +  IP++ S   +L    + +N L+A+P  +  +S L  L
Sbjct: 97  LPDTMGRLTQLIYLYLSNNSLTDIPATFSALRNLRYLNITDNHLTAIPEAVFAMSALEEL 156

Query: 259 DLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSL 317
            L++N++     +   L+ L  L L NN  S  P  IG++T LR L ++GN ++++  S 
Sbjct: 157 RLYNNKISVLAEKIGDLKNLQELHLMNNHFSQFPDSIGQLTQLRVLDISGNRIKSIPDSF 216

Query: 318 VNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEI 376
                 A L +L+      N  SE   T   L  + T        L L   NL+++P  I
Sbjct: 217 ------AQLNHLQDLNFRFNNLSEVPGTIAALTHLQT--------LDLRANNLTSLPESI 262

Query: 377 WEAGEITKLDLSRNSIQELPPELSSCA 403
            E   + +LDL  NS    P +L+S  
Sbjct: 263 QELKNLKRLDLRWNSFTTYPEQLASLV 289



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 10/167 (5%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYK----------NFDEAGEGDKWWEAVDLQKLILAH 54
             A R    LN+++  L  +P  V+           N   +   +K  +  +LQ+L L +
Sbjct: 124 FSALRNLRYLNITDNHLTAIPEAVFAMSALEELRLYNNKISVLAEKIGDLKNLQELHLMN 183

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           N+  +  + +  L  L VL++S N++  +P +  +L+ L+ L+  FN++ ++P  I + T
Sbjct: 184 NHFSQFPDSIGQLTQLRVLDISGNRIKSIPDSFAQLNHLQDLNFRFNNLSEVPGTIAALT 243

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSK 161
            L   D  +N L  LP S+    NL       N  T+ PE LA   K
Sbjct: 244 HLQTLDLRANNLTSLPESIQELKNLKRLDLRWNSFTTYPEQLASLVK 290


>gi|124005686|ref|ZP_01690525.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988754|gb|EAY28360.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 439

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 181/403 (44%), Gaps = 51/403 (12%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           +K   T+ +L LS++ +  +P EV              +   ++ + L  NN+  L  + 
Sbjct: 62  IKELYTTDTLGLSSKGVEYLPPEV-------------GQLQQMKYIGLDGNNLTTLPTEF 108

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
           + L  +  L++ HN  S  P  I  L  L+ L +    +  +P  IG    L K D  +N
Sbjct: 109 KLLQNVINLHLDHNPFSTFPDEIFSLASLQDLALGDTGLSSLPSGIGRLRRLQKLDLRNN 168

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL  LP+ +    NL     S N  T+LP+++    ++  L++  N +T LS N  +S  
Sbjct: 169 QLAYLPTKITHLKNLRHLNLSGNQFTTLPKEVNSLKELVYLNISDNPITTLSLN-PSSLQ 227

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L    N L  +P  I  L  L  L L +N+I ++P  I     L E Y+ +N LSA
Sbjct: 228 NLRSLSLGNNNLTELPPEIFELKNLEVLWLSKNQIKNLPPEIKKLKHLEELYLYSNQLSA 287

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           LP E+G+L +L  L L  NQ                      LS LPPEIG++  L+ L 
Sbjct: 288 LPPEIGELKELFMLGLDKNQ----------------------LSDLPPEIGQLKNLQGLY 325

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELS 363
           +  N L  L + +VN      LK LR  RL +N+ +     K     +        K L 
Sbjct: 326 VPKNKLALLPNEIVN------LKDLRELRLSDNQLTYLPEEKWKTKHL--------KVLY 371

Query: 364 LEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           L+   L  +P  I     +  L+LS N ++ELP E+S+  SL+
Sbjct: 372 LDSNQLKTLPIGICSLKNLETLNLSFNELEELPSEVSNLKSLR 414



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 125/263 (47%), Gaps = 2/263 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQKL L +N +  L   + +L  L  LN+S N+ + LP  +  L  L  L++S N I  +
Sbjct: 160 LQKLDLRNNQLAYLPTKITHLKNLRHLNLSGNQFTTLPKEVNSLKELVYLNISDNPITTL 219

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
                S   L      +N L ELP  +    NL     S N I +LP ++     + +L 
Sbjct: 220 SLNPSSLQNLRSLSLGNNNLTELPPEIFELKNLEVLWLSKNQIKNLPPEIKKLKHLEELY 279

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           +  N+L+ L    I     L  L   KN L+ +P  IG L  L  L + +N++  +P+ I
Sbjct: 280 LYSNQLSALPPE-IGELKELFMLGLDKNQLSDLPPEIGQLKNLQGLYVPKNKLALLPNEI 338

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNN 285
                L E  + +N L+ LP E  K   L  L L SNQLK   +  C L+ L  L+LS N
Sbjct: 339 VNLKDLRELRLSDNQLTYLPEEKWKTKHLKVLYLDSNQLKTLPIGICSLKNLETLNLSFN 398

Query: 286 SLSGLPPEIGKMTTLRKLLLTGN 308
            L  LP E+  + +LR L L GN
Sbjct: 399 ELEELPSEVSNLKSLRWLDLEGN 421



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 149/345 (43%), Gaps = 46/345 (13%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
            L +S   +  LP  +G+L  +K + +  N++  +P E      ++      N     P 
Sbjct: 70  TLGLSSKGVEYLPPEVGQLQQMKYIGLDGNNLTTLPTEFKLLQNVINLHLDHNPFSTFPD 129

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
            +    +L D    +  ++SLP  +    ++ KLD+  N+L  L    I     L  L  
Sbjct: 130 EIFSLASLQDLALGDTGLSSLPSGIGRLRRLQKLDLRNNQLAYLPTK-ITHLKNLRHLNL 188

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSI---PSSISGCCSLAEFYMGNNALSALPAE 248
           S N    +P+ + SL  L+ L++  N I ++   PSS+    SL+   +GNN L+ LP E
Sbjct: 189 SGNQFTTLPKEVNSLKELVYLNISDNPITTLSLNPSSLQNLRSLS---LGNNNLTELPPE 245

Query: 249 LGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           + +L  L  L L  NQ+K    E  +L+ L  L L +N LS LPPEIG++  L  L L  
Sbjct: 246 IFELKNLEVLWLSKNQIKNLPPEIKKLKHLEELYLYSNQLSALPPEIGELKELFMLGLDK 305

Query: 308 NPLRTLRSSLVNGPTPALLKYLRS-RLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
           N L  L       P    LK L+   +P+N+                             
Sbjct: 306 NQLSDL------PPEIGQLKNLQGLYVPKNK----------------------------- 330

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
             L+ +P+EI    ++ +L LS N +  LP E      L+V + D
Sbjct: 331 --LALLPNEIVNLKDLRELRLSDNQLTYLPEEKWKTKHLKVLYLD 373



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 6/211 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L L +NN+ +L  ++  L  L VL +S N++  LP  I +L  L+ L +  N +  
Sbjct: 228 NLRSLSLGNNNLTELPPEIFELKNLEVLWLSKNQIKNLPPEIKKLKHLEELYLYSNQLSA 287

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG    L       NQL +LP  +G+  NL       N +  LP ++ +   + +L
Sbjct: 288 LPPEIGELKELFMLGLDKNQLSDLPPEIGQLKNLQGLYVPKNKLALLPNEIVNLKDLREL 347

Query: 166 DVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIP 223
            +  N+LT L       W    L  L    N L  +P  I SL  L  L+L  N +  +P
Sbjct: 348 RLSDNQLTYLPE---EKWKTKHLKVLYLDSNQLKTLPIGICSLKNLETLNLSFNELEELP 404

Query: 224 SSISGCCSLAEFYMGNNALSALPAELGKLSK 254
           S +S   SL    +  N LS    ++G LS+
Sbjct: 405 SEVSNLKSLRWLDLEGN-LSIAEKKIGGLSR 434



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 102/219 (46%), Gaps = 16/219 (7%)

Query: 13  SLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTV 72
           SL+L N +L ++P E++             E  +L+ L L+ N I+ L  +++ L  L  
Sbjct: 231 SLSLGNNNLTELPPEIF-------------ELKNLEVLWLSKNQIKNLPPEIKKLKHLEE 277

Query: 73  LNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSS 132
           L +  N+LS LP  IGEL  L  L +  N +  +P EIG    L       N+L  LP+ 
Sbjct: 278 LYLYSNQLSALPPEIGELKELFMLGLDKNQLSDLPPEIGQLKNLQGLYVPKNKLALLPNE 337

Query: 133 LGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIAS 192
           +    +L + + S+N +T LPE+      +  L ++ N+L  L    I S   L  L  S
Sbjct: 338 IVNLKDLRELRLSDNQLTYLPEEKWKTKHLKVLYLDSNQLKTLPIG-ICSLKNLETLNLS 396

Query: 193 KNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCS 231
            N L  +P  + +L  L  LDL  N  LSI     G  S
Sbjct: 397 FNELEELPSEVSNLKSLRWLDLEGN--LSIAEKKIGGLS 433


>gi|119626868|gb|EAX06463.1| leucine rich repeat containing 7, isoform CRA_c [Homo sapiens]
          Length = 1574

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 150/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 64  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 111

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 112 SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 171

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 172 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 231

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +   L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 232 EFGELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 290

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 291 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 350

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 351 LPSTIGYLHSLRTLAVDEN 369



 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 130/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+  ELP  + ++  L+ L +  N++ 
Sbjct: 198 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQ 257

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 258 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 317

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 318 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 376

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS
Sbjct: 377 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 436

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 437 DNQSKALIP 445



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 122/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 56  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 93

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 94  QIEELPKQLFNCQALRKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 152

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L               
Sbjct: 153 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL--------------- 197

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                  ++L +L+L  N L  LP  + K+  L +L L  N           G  P +L 
Sbjct: 198 -------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------GELPEVLD 241

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            +++                            +EL ++   L  +P  I +   +  LD+
Sbjct: 242 QIQNL---------------------------RELWMDNNALQVLPGSIGKLKMLVYLDM 274

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  ++S C +L+
Sbjct: 275 SKNRIETVDMDISGCEALE 293


>gi|345308702|ref|XP_001520661.2| PREDICTED: protein LAP2 [Ornithorhynchus anatinus]
          Length = 1559

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 157/328 (47%), Gaps = 37/328 (11%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 113 TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 160

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 161 LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 220

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL---------- 179
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L   +          
Sbjct: 221 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 280

Query: 180 ------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
                       +   + L E     N L+ +P  +G+L +L  LD+ +N I  +   +S
Sbjct: 281 LGSNEFSEVPEVLEQLSGLKEFWMDGNRLSFIPGFLGNLKQLTYLDVSKNSIEMVEEGVS 340

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSV--LDLSNN 285
           GC SL +  + +N+L  LP  +G L KL TL +  NQL  Y  ++    +S+  LD S N
Sbjct: 341 GCESLQDLLLSSNSLQQLPESIGSLKKLTTLKIDENQLM-YLPDSIGGLISIEELDCSFN 399

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
            +   PP +G++T +R      N L+ L
Sbjct: 400 EIEAFPPSVGQLTNIRTFAADHNFLQQL 427



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 81/145 (55%), Gaps = 4/145 (2%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L+L+ N++++L E + +L  LT L +  N+L  LP +IG L  ++ LD SFN I   
Sbjct: 345 LQDLLLSSNSLQQLPESIGSLKKLTTLKIDENQLMYLPDSIGGLISIEELDCSFNEIEAF 404

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  +G  T +  F    N L++LP  +G   N++     +N + +LPE++ D  K+  ++
Sbjct: 405 PPSVGQLTNIRTFAADHNFLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVIN 464

Query: 167 VEGNKLTVLSNNLIASWTMLTELIA 191
           +  N+L     NL  S+T L +L A
Sbjct: 465 LSDNRL----KNLPFSFTKLQQLTA 485



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 128/320 (40%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 109 GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 168

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 169 NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 204

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 205 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 253

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N                  
Sbjct: 254 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSN------------------ 284

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                     E SE     E L  +        KE  ++G  LS IP  +    ++T LD
Sbjct: 285 ----------EFSEVPEVLEQLSGL--------KEFWMDGNRLSFIPGFLGNLKQLTYLD 326

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+NSI+ +   +S C SLQ
Sbjct: 327 VSKNSIEMVEEGVSGCESLQ 346


>gi|418677552|ref|ZP_13238826.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418687293|ref|ZP_13248452.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418742391|ref|ZP_13298764.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400320742|gb|EJO68602.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410737617|gb|EKQ82356.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410750749|gb|EKR07729.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 403

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 171/335 (51%), Gaps = 23/335 (6%)

Query: 72  VLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPS 131
           +L++S N+L+ LP  IG+L  L+ L +  N +  +P+EIG    L   D + N++   P 
Sbjct: 50  ILDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPK 109

Query: 132 SLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIA 191
              +  NL     + N ++ LPE++ + ++++ L++  N+LT L   +     +LT L  
Sbjct: 110 EFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLT-LYL 168

Query: 192 SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGK 251
           S N LN +P  +G L  LI L L  N+++S+P  I    +L   ++ +N  + LP E+G+
Sbjct: 169 SGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDNEFNTLPEEIGE 228

Query: 252 LSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPL 310
           L  L  LD+  N+   +  E  +L +L+VL+LSNN L+ LP EIG++  L  L L+ N L
Sbjct: 229 LENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVNKL 288

Query: 311 RTLRSSLVNGPTPALLKYLR----SRLPENEDSEASTTKEDLITMATRLSVTSKELSLEG 366
            +L + +       +L YL     S LPE             I    +LS+    L L+ 
Sbjct: 289 NSLPNEMGQLKNLDVL-YLNGNNLSNLPEE------------IGELKKLSI----LKLDS 331

Query: 367 MNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
             L+ +P EI +   +  L LS N +  +P EL  
Sbjct: 332 NQLTILPKEIGQLENLVTLSLSNNKLISIPNELGQ 366



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 143/273 (52%), Gaps = 6/273 (2%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           ++W+  +L+ L L  N +  L E++R L  L VLN++ N+L+ LP  IG+L  L +L +S
Sbjct: 110 EFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLTLYLS 169

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N++  +P+E+G    L+    S N+L  LP  + +  NL      +N   +LPE++ + 
Sbjct: 170 GNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDNEFNTLPEEIGEL 229

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTM--LTELIASKNLLNGMPETIGSLSRLIRLDLHQN 217
             +  LD+  N+ +         W +  L  L  S N L  +P+ IG L  L  L L  N
Sbjct: 230 ENLKILDISRNRFSTFPKEF---WKLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVN 286

Query: 218 RILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR- 276
           ++ S+P+ +    +L   Y+  N LS LP E+G+L KL  L L SNQL     E  QL  
Sbjct: 287 KLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSILKLDSNQLTILPKEIGQLEN 346

Query: 277 LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNP 309
           L  L LSNN L  +P E+G++  L  L L  NP
Sbjct: 347 LVTLSLSNNKLISIPNELGQLRNLSLLNLRYNP 379



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 146/310 (47%), Gaps = 15/310 (4%)

Query: 5   LKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDL 64
           LK       L+LS+  L  +P E+              + V+L++L L +N +  L E++
Sbjct: 42  LKTPNEVRILDLSSNRLTTLPKEI-------------GQLVNLERLYLLNNELTTLPEEI 88

Query: 65  RNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSN 124
             L  L  L+++ N++S  P    +L  L+ L ++ N +  +P+EI     L   + + N
Sbjct: 89  GKLENLKTLDITRNRISTFPKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDN 148

Query: 125 QLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWT 184
           QL  LP  +G+  NL     S N + SLP ++     +  L + GNKL  L    I    
Sbjct: 149 QLTTLPKEIGQLENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKE-IRQLG 207

Query: 185 MLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
            L  L    N  N +PE IG L  L  LD+ +NR  + P        L    + NN L+ 
Sbjct: 208 NLGILHLFDNEFNTLPEEIGELENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTT 267

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKL 303
           LP E+G+L  L  L L  N+L     E  QL+ L VL L+ N+LS LP EIG++  L  L
Sbjct: 268 LPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSIL 327

Query: 304 LLTGNPLRTL 313
            L  N L  L
Sbjct: 328 KLDSNQLTIL 337



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 126/278 (45%), Gaps = 28/278 (10%)

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
           +L E L   +++  LD+  N+LT L    I     L  L    N L  +PE IG L  L 
Sbjct: 37  NLIEALKTPNEVRILDLSSNRLTTLPKE-IGQLVNLERLYLLNNELTTLPEEIGKLENLK 95

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
            LD+ +NRI + P       +L   ++  N LS LP E+ +L++L  L+L+ NQL     
Sbjct: 96  TLDITRNRISTFPKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPK 155

Query: 271 EACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E  QL  L  L LS N+L+ LP E+G++  L  L L+GN L +L   +       +L   
Sbjct: 156 EIGQLENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLF 215

Query: 330 RSRLPENEDSEASTTKEDLITMAT---------RLSVTSKE---------LSLEGMNLSA 371
                   D+E +T  E++  +           R S   KE         L+L    L+ 
Sbjct: 216 --------DNEFNTLPEEIGELENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTT 267

Query: 372 IPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
           +P EI +   +  L LS N +  LP E+    +L V +
Sbjct: 268 LPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLY 305


>gi|397521140|ref|XP_003830661.1| PREDICTED: leucine-rich repeat-containing protein 7 [Pan paniscus]
          Length = 1537

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 150/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +   L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 195 EFGELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 314 LPSTIGYLHSLRTLAVDEN 332



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 130/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+  ELP  + ++  L+ L +  N++ 
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQ 220

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 280

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 281 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 339

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 400 DNQSKALIP 408



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 122/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 19  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 56

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 57  QIEELPKQLFNCQALRKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 115

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L               
Sbjct: 116 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL--------------- 160

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                  ++L +L+L  N L  LP  + K+  L +L L  N           G  P +L 
Sbjct: 161 -------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------GELPEVLD 204

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            +++                            +EL ++   L  +P  I +   +  LD+
Sbjct: 205 QIQNL---------------------------RELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  ++S C +L+
Sbjct: 238 SKNRIETVDMDISGCEALE 256


>gi|395730377|ref|XP_002810755.2| PREDICTED: leucine-rich repeat-containing protein 7 [Pongo abelii]
          Length = 1537

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 150/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 27  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 74

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 75  SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 134

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 135 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 194

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +   L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 195 EFGELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 253

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 254 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 313

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 314 LPSTIGYLHSLRTLAVDEN 332



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 130/249 (52%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+  ELP  + ++  L+ L +  N++ 
Sbjct: 161 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQ 220

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 221 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 280

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 281 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 339

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL  L+L  N+LK       +L+ L+ L LS
Sbjct: 340 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSFTKLKELAALWLS 399

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 400 DNQSKALIP 408



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 122/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 19  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 56

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 57  QIEELPKQLFNCQALRKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 115

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L               
Sbjct: 116 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL--------------- 160

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                  ++L +L+L  N L  LP  + K+  L +L L  N           G  P +L 
Sbjct: 161 -------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------GELPEVLD 204

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            +++                            +EL ++   L  +P  I +   +  LD+
Sbjct: 205 QIQNL---------------------------RELWMDNNALQVLPGSIGKLKMLVYLDM 237

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  ++S C +L+
Sbjct: 238 SKNRIETVDMDISGCEALE 256


>gi|441648556|ref|XP_004093063.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Nomascus
           leucogenys]
          Length = 1582

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 153/326 (46%), Gaps = 48/326 (14%)

Query: 41  WWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSF 100
           ++  ++L+KL L+ N I++L  ++ N   L  L+VS N + E+P +I     L+  D S 
Sbjct: 91  FFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSG 150

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           N + ++PD      +L     +   L+ LP  +G   NL   +   N + SLP  L+   
Sbjct: 151 NPLSRLPDGFTQLRSLAHLALNDVSLQALPRDVGNLANLVTLELRENLLKSLPASLSFLV 210

Query: 161 KMSKLDVEGNKLTVLSNNLIA--------------------------------SWTMLTE 188
           K+ +LD+ GN L VL + L A                                S   L E
Sbjct: 211 KLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEE 270

Query: 189 LIA-------------SKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEF 235
           L A             S+NLL  +P+ IG L +L  L + QNR+  +  +I  C +L+E 
Sbjct: 271 LPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSEL 330

Query: 236 YMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSNNSLSGLPPE 293
            +  N L ALP  LGKL+KL  L++  N L+    E   C + LSVL L +N L+ LPPE
Sbjct: 331 ILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPPEIGGC-VALSVLSLRDNRLAVLPPE 389

Query: 294 IGKMTTLRKLLLTGNPLRTLRSSLVN 319
           +     L  L + GN L++L  +L +
Sbjct: 390 LAHTAELHVLDVAGNRLQSLPFALTH 415



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 24/241 (9%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L++L L  N++E L + L  LP L  L +  N+LS LP  +G L  L  LDVS N + 
Sbjct: 210 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 269

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           ++P E+G    L     S N L+ LP  +G+   LS  K   N +  + E + DC  +S 
Sbjct: 270 ELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS- 328

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
                                  ELI ++NLL  +P ++G L++L  L++ +N + ++P 
Sbjct: 329 -----------------------ELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 365

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSN 284
            I GC +L+   + +N L+ LP EL   ++L  LD+  N+L+        L L  L L+ 
Sbjct: 366 EIGGCVALSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRLQSLPFALTHLNLKALWLAE 425

Query: 285 N 285
           N
Sbjct: 426 N 426



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 152/318 (47%), Gaps = 42/318 (13%)

Query: 93  LKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC--LNLSDFKASNNCIT 150
           L+ L +S N I ++P E+ +   LV+ D S N + E+P S+  C  L ++DF  S N ++
Sbjct: 97  LRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADF--SGNPLS 154

Query: 151 SLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLI 210
            LP+       ++ L +    L  L  + + +   L  L   +NLL  +P ++  L +L 
Sbjct: 155 RLPDGFTQLRSLAHLALNDVSLQALPRD-VGNLANLVTLELRENLLKSLPASLSFLVKLE 213

Query: 211 RLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCV 270
           +LDL  N +  +P ++    +L E ++  N LSALP ELG L +L  LD+  N+L+E   
Sbjct: 214 QLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPA 273

Query: 271 EACQLRLSVLDL-SNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
           E   L L    L S N L  LP  IG++  L                       ++LK  
Sbjct: 274 ELGGLVLLTDLLLSQNLLRRLPDGIGQLKQL-----------------------SILKVD 310

Query: 330 RSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSR 389
           ++RL   E +EA    E+L            EL L    L A+P  + +  ++T L++ R
Sbjct: 311 QNRL--CEVTEAIGDCENL-----------SELILTENLLMALPRSLGKLTKLTNLNVDR 357

Query: 390 NSIQELPPELSSCASLQV 407
           N ++ LPPE+  C +L V
Sbjct: 358 NHLEALPPEIGGCVALSV 375


>gi|187954433|gb|AAI41179.1| Erbb2ip protein [Mus musculus]
          Length = 1294

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 154/333 (46%), Gaps = 35/333 (10%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNL---------- 179
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L   +          
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 180 ------------IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
                       +   + L E     N L  +P  IGSL +L  LD+ +N I  +   IS
Sbjct: 191 LGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 250

Query: 228 GCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNS 286
            C +L +F + +N+L  LP  +G L  + TL +  NQL         LR +  LD S N 
Sbjct: 251 TCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNE 310

Query: 287 LSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
           +  LP  IG++T +R      N L+ L   + N
Sbjct: 311 IEALPSSIGQLTNMRTFAADHNYLQQLPPEIGN 343



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 24/199 (12%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L ++ NNIE ++E +     L    +S N L +LP  IG L  + +L +  N +M +
Sbjct: 232 LTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYL 291

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD IG   ++ + DCS N+++ LPSS+G+  N+  F A +N +  LP +           
Sbjct: 292 PDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPE----------- 340

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                        I +W  +T L    N L  +PE +G + +L  ++L  NR+ ++P S 
Sbjct: 341 -------------IGNWKNITVLFLHCNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 227 SGCCSLAEFYMGNNALSAL 245
           +    L   ++ +N    L
Sbjct: 388 TKLQQLTAMWLSDNQSKPL 406



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 4/146 (2%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ  +L+ N++++L E + +L  +T L +  N+L  LP +IG L  ++ LD SFN I  
Sbjct: 254 NLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEA 313

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P  IG  T +  F    N L++LP  +G   N++      N + +LPE++ D  K+  +
Sbjct: 314 LPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVLFLHCNKLETLPEEMGDMQKLKVI 373

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIA 191
           ++  N+L     NL  S+T L +L A
Sbjct: 374 NLSDNRL----KNLPFSFTKLQQLTA 395



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 129/320 (40%), Gaps = 83/320 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           GE   + +LD S  S+ ++P EI +    L +    +NQ++ELP  L  C +L      +
Sbjct: 19  GEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPD 78

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T+LP  +A+   + +LDV                        SKN +   PE I + 
Sbjct: 79  NDLTTLPASIANLINLRELDV------------------------SKNGIQEFPENIKNC 114

Query: 207 SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLK 266
             L  ++   N I  +P   S   +L + Y+ +  L  LPA  G+L+KL           
Sbjct: 115 KVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKL----------- 163

Query: 267 EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                       +L+L  N L  LP  + ++T L +L L  N    +         P +L
Sbjct: 164 -----------QILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEV---------PEVL 203

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
           + L                              +E  ++G  L+ IP  I    ++T LD
Sbjct: 204 EQLSGL---------------------------REFWMDGNRLTFIPGFIGSLRQLTYLD 236

Query: 387 LSRNSIQELPPELSSCASLQ 406
           +S+N+I+ +   +S+C +LQ
Sbjct: 237 VSKNNIEMVEEGISTCENLQ 256


>gi|124009256|ref|ZP_01693936.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123985138|gb|EAY25077.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 306

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 128/240 (53%), Gaps = 23/240 (9%)

Query: 75  VSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLG 134
           ++++KL++LP  IG L  L++L++  N +  +P EI    AL   D   NQ+  LP+S+G
Sbjct: 69  LNNHKLTQLPTEIGLLRNLQTLELRQNKLTTLPKEIMQLKALQILDLYDNQIAHLPASIG 128

Query: 135 RCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKN 194
              +L       N + +LP ++   + ++ L +  NKL  L  + I     L EL   KN
Sbjct: 129 ALHSLHKLDLYKNGLQALPYEIGQLASLTTLWLNENKLKALPES-IGQLHHLQELDIHKN 187

Query: 195 LLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSK 254
            L+ +PE IG+L+ L  LDL QN++ S+P++I    +L E ++ +N L+ LP ++G+L  
Sbjct: 188 ELSVLPEAIGNLTNLQVLDLRQNKLTSLPATIGQLQNLRELHLSSNRLTTLPPQIGELQG 247

Query: 255 LGTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLR 314
           L                       VL +++N +S LP EI ++ +L+KL +  NP+  LR
Sbjct: 248 LW----------------------VLGIADNRISSLPEEIRQLQSLQKLYICNNPVAALR 285



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 107/200 (53%), Gaps = 1/200 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +LQ L L  N +  L +++  L  L +L++  N+++ LPA+IG LH L  LD+  N +  
Sbjct: 86  NLQTLELRQNKLTTLPKEIMQLKALQILDLYDNQIAHLPASIGALHSLHKLDLYKNGLQA 145

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG   +L     + N+LK LP S+G+  +L +     N ++ LPE + + + +  L
Sbjct: 146 LPYEIGQLASLTTLWLNENKLKALPESIGQLHHLQELDIHKNELSVLPEAIGNLTNLQVL 205

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           D+  NKLT L    I     L EL  S N L  +P  IG L  L  L +  NRI S+P  
Sbjct: 206 DLRQNKLTSLPAT-IGQLQNLRELHLSSNRLTTLPPQIGELQGLWVLGIADNRISSLPEE 264

Query: 226 ISGCCSLAEFYMGNNALSAL 245
           I    SL + Y+ NN ++AL
Sbjct: 265 IRQLQSLQKLYICNNPVAAL 284



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 109/219 (49%), Gaps = 13/219 (5%)

Query: 96  LDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPED 155
           L+V   S +++   I        FD    QL+++ ++    LN +    +N+ +T LP +
Sbjct: 32  LEVYLTSYLRLYQSI--------FD---KQLQKIEAAHLAYLNQATLCLNNHKLTQLPTE 80

Query: 156 LADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLH 215
           +     +  L++  NKLT L    I     L  L    N +  +P +IG+L  L +LDL+
Sbjct: 81  IGLLRNLQTLELRQNKLTTLPKE-IMQLKALQILDLYDNQIAHLPASIGALHSLHKLDLY 139

Query: 216 QNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL 275
           +N + ++P  I    SL   ++  N L ALP  +G+L  L  LD+H N+L         L
Sbjct: 140 KNGLQALPYEIGQLASLTTLWLNENKLKALPESIGQLHHLQELDIHKNELSVLPEAIGNL 199

Query: 276 -RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTL 313
             L VLDL  N L+ LP  IG++  LR+L L+ N L TL
Sbjct: 200 TNLQVLDLRQNKLTSLPATIGQLQNLRELHLSSNRLTTL 238



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           +   L  L L  N ++ L E +  L  L  L++  N+LS LP AIG L  L+ LD+  N 
Sbjct: 152 QLASLTTLWLNENKLKALPESIGQLHHLQELDIHKNELSVLPEAIGNLTNLQVLDLRQNK 211

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +P  IG    L +   SSN+L  LP  +G    L     ++N I+SLPE++     +
Sbjct: 212 LTSLPATIGQLQNLRELHLSSNRLTTLPPQIGELQGLWVLGIADNRISSLPEEIRQLQSL 271

Query: 163 SKLDVEGNKLTVL 175
            KL +  N +  L
Sbjct: 272 QKLYICNNPVAAL 284



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)

Query: 214 LHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEAC 273
           L+ +++  +P+ I    +L    +  N L+ LP E+ +L  L  LDL+ NQ+        
Sbjct: 69  LNNHKLTQLPTEIGLLRNLQTLELRQNKLTTLPKEIMQLKALQILDLYDNQIAHLPASIG 128

Query: 274 QLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR 332
            L  L  LDL  N L  LP EIG++ +L  L L  N L+ L  S+        L +L+  
Sbjct: 129 ALHSLHKLDLYKNGLQALPYEIGQLASLTTLWLNENKLKALPESI------GQLHHLQEL 182

Query: 333 LPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSI 392
             +   +E S   E +  + T L V    L L    L+++P+ I +   + +L LS N +
Sbjct: 183 --DIHKNELSVLPEAIGNL-TNLQV----LDLRQNKLTSLPATIGQLQNLRELHLSSNRL 235

Query: 393 QELPPELSSCASLQV 407
             LPP++     L V
Sbjct: 236 TTLPPQIGELQGLWV 250


>gi|51476914|emb|CAH18423.1| hypothetical protein [Homo sapiens]
          Length = 1530

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 150/319 (47%), Gaps = 37/319 (11%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+ S+ SL+ VP EV+ NF+             L++L L  N IE+L + L N   L  L
Sbjct: 20  LDYSHCSLQQVPKEVF-NFERT-----------LEELYLDANQIEELPKQLFNCQALRKL 67

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           ++  N LS LP  I  L  LK LD+S N + + P+ I     L   + S N + +LP   
Sbjct: 68  SIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGF 127

Query: 134 GRCLNLS---------DFKASN--------------NCITSLPEDLADCSKMSKLDVEGN 170
            + LNL+         +F  +N              N + +LP+ +   +++ +LD+  N
Sbjct: 128 TQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNN 187

Query: 171 KLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCC 230
           +   L   ++     L EL    N L  +P +IG L  L+ LD+ +NRI ++   ISGC 
Sbjct: 188 EFGELP-EVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCE 246

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSG 289
           +L +  + +N L  LP  +G L KL TL +  NQL         L  L   D S N L  
Sbjct: 247 ALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELES 306

Query: 290 LPPEIGKMTTLRKLLLTGN 308
           LP  IG + +LR L +  N
Sbjct: 307 LPSTIGYLHSLRTLAVDEN 325



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 129/249 (51%), Gaps = 2/249 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           V L+ L L  N+++ L + +  L  L  L++ +N+  ELP  + ++  L+ L +  N++ 
Sbjct: 154 VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQ 213

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    LV  D S N+++ +   +  C  L D   S+N +  LP+ +    K++ 
Sbjct: 214 VLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTT 273

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           L V+ N+LT+L N  I + ++L E   S N L  +P TIG L  L  L + +N +  +P 
Sbjct: 274 LKVDDNQLTMLPNT-IGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPR 332

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLS 283
            I  C ++    + +N L  LP E+G++ KL   +L  N+LK       +L+ L+ L LS
Sbjct: 333 EIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVPNLSDNRLKNLPFSFTKLKELAALWLS 392

Query: 284 NNSLSGLPP 292
           +N    L P
Sbjct: 393 DNQSKALIP 401



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 122/319 (38%), Gaps = 81/319 (25%)

Query: 88  GELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNN 147
           GE  ++  LD S  S+ ++P E+        F+ +                L +     N
Sbjct: 12  GEEEIISVLDYSHCSLQQVPKEV------FNFERT----------------LEELYLDAN 49

Query: 148 CITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLS 207
            I  LP+ L +C  + KL +  N L+ L    IAS   L EL  SKN +   PE I    
Sbjct: 50  QIEELPKQLFNCQALRKLSIPDNDLSNLPTT-IASLVNLKELDISKNGVQEFPENIKCCK 108

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
            L  ++   N I  +P   +   +L + Y+ +  L  LPA  G+L               
Sbjct: 109 CLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRL--------------- 153

Query: 268 YCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLK 327
                  ++L +L+L  N L  LP  + K+  L +L L  N           G  P +L 
Sbjct: 154 -------VKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEF---------GELPEVLD 197

Query: 328 YLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDL 387
            +++                            +EL ++   L  +P  I +   +  LD+
Sbjct: 198 QIQNL---------------------------RELWMDNNALQVLPGSIGKLKMLVYLDM 230

Query: 388 SRNSIQELPPELSSCASLQ 406
           S+N I+ +  ++S C +L+
Sbjct: 231 SKNRIETVDMDISGCEALE 249


>gi|194380802|dbj|BAG58554.1| unnamed protein product [Homo sapiens]
          Length = 610

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 176/402 (43%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  +  C+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISTCE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLMYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   +       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLF 351



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 149/311 (47%), Gaps = 48/311 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LT++  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISTCENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGT---- 257
           TIGSL  +  L + +N+++ +P SI G  S+ E     N + ALP+ +G+L+ L T    
Sbjct: 271 TIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAAD 330

Query: 258 -------------------LDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
                              L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGN 308
             L  + L+ N
Sbjct: 391 QQLTAMWLSDN 401



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 44/253 (17%)

Query: 1   MDRILKAARTSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEA-------------VDL 47
           M+R+ +  R    L+L +    +VP EV +    +G  + W +A               L
Sbjct: 180 MNRLTQLER----LDLGSNEFTEVP-EVLEQL--SGLKEFWMDANRLTFIPGFIGSLKQL 232

Query: 48  QKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIP 107
             L ++ NNIE ++E +     L  L +S N L +LP  IG L  + +L +  N +M +P
Sbjct: 233 TYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLP 292

Query: 108 DEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV 167
           D IG   ++ + DCS N+++ LPSS+G+  NL  F A +N +  LP +            
Sbjct: 293 DSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPE------------ 340

Query: 168 EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSIS 227
                       I SW  +T L    N L  +PE +G + +L  ++L  NR+ ++P S +
Sbjct: 341 ------------IGSWKNITVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFT 388

Query: 228 GCCSLAEFYMGNN 240
               L   ++ +N
Sbjct: 389 KLQQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 1/220 (0%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
             L++L L  N   ++ E L  L  L    +  N+L+ +P  IG L  L  LDVS N+I 
Sbjct: 184 TQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIE 243

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            + + I +   L     SSN L++LP ++G   N++  K   N +  LP+ +     + +
Sbjct: 244 MVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEE 303

Query: 165 LDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPS 224
           LD   N++  L ++ I   T L    A  N L  +P  IGS   +  L LH N++ ++P 
Sbjct: 304 LDCSFNEVEALPSS-IGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPE 362

Query: 225 SISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQ 264
            +     L    + +N L  LP    KL +L  + L  NQ
Sbjct: 363 EMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 42/240 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LPA +  L  L  LD+  N ++E+   ++ C++ L++++ S N +S LP    ++  L +
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTIVEASVNPISKLPDGFSQLLNLTQ 142

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L                  A L++L    P N                T+L +    L
Sbjct: 143 LYLND----------------AFLEFL----PAN------------FGRLTKLQI----L 166

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG 422
            L    L  +P  +    ++ +LDL  N   E+P  L   + L+  + D   N+ + I G
Sbjct: 167 ELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD--ANRLTFIPG 224



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 5/113 (4%)

Query: 42  WEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFN 101
           W+ + +  L L  N +E L E++ ++  L V+N+S N+L  LP +  +L  L ++ +S N
Sbjct: 344 WKNITV--LFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 102 SIMKIPDEIGSATALVKFDCSSNQLKELPSSLGR-CLNLSDFKASNNCITSLP 153
             M       + T +  F C S+  ++L  S G   L+++D + S   I  +P
Sbjct: 402 QSMLSRSFNSNFTTVSSFHCGSS--RDLHGSQGSLALSVADRRGSGGHIFRMP 452


>gi|260803177|ref|XP_002596467.1| hypothetical protein BRAFLDRAFT_243711 [Branchiostoma floridae]
 gi|229281724|gb|EEN52479.1| hypothetical protein BRAFLDRAFT_243711 [Branchiostoma floridae]
          Length = 933

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 175/388 (45%), Gaps = 34/388 (8%)

Query: 50  LILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDE 109
           L L  N +  L E    L  + VL++  NK +  P+AI  L  LK L++S N I  +PD 
Sbjct: 1   LHLYQNELSSLPERFGLLTTIRVLDLRGNKFAVFPSAILSLTQLKELNISQNKIAVVPDN 60

Query: 110 IGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDV-- 167
           I     L       NQL  LP +LG    L + +   N +  +PE +    ++  L +  
Sbjct: 61  IEKLWQLTDLLMDHNQLSFLPETLGNLSQLRELRVQGNPLACVPECIKKLKRLQSLSLGN 120

Query: 168 -------EGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
                  +G  ++ L  + +A   +LT +     +L  +P+T G+L RL  LD   N   
Sbjct: 121 FLGLGQEDGYTISELPED-VAKLNLLTIMTVRGGILTSLPDTFGTL-RLKELDFSFNLFA 178

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSV 279
            IP  +    +L +  +  N L+ LP ++ KL KL T+ L+ N++KE    A +L RL +
Sbjct: 179 EIPKQVIEVSTLEKLNLCYNRLTNLPGDVHKLQKLKTMILYGNEIKELPPSALKLSRLVM 238

Query: 280 LDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPEN-ED 338
           L+L +N L+ LP +IGK+ +L  LL++GN +  L         P  L  L+S    N  D
Sbjct: 239 LNLDHNQLTTLPDDIGKLESLEYLLMSGNNMDFL---------PEGLCTLKSLFHLNISD 289

Query: 339 SEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEIT----KLDLSRNSIQE 394
           +       D   +  RL  +++ L   G  L   P  I +AG +     +  L R  +  
Sbjct: 290 NNVEVLPADFGKLP-RLK-SARHLHTHGNPLVQPPRRICDAGMVAIRSYQEQLQRTEVVR 347

Query: 395 LPPELSSCASLQVKFSDLVTNKESCISG 422
             P +  C      F D +  K S + G
Sbjct: 348 T-PRIKLCV-----FGDSLAGKTSLVYG 369



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 4/149 (2%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L  + N   ++ + +  +  L  LN+ +N+L+ LP  + +L  LK++ +  N I ++
Sbjct: 167 LKELDFSFNLFAEIPKQVIEVSTLEKLNLCYNRLTNLPGDVHKLQKLKTMILYGNEIKEL 226

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P      + LV  +   NQL  LP  +G+  +L     S N +  LPE L     +  L+
Sbjct: 227 PPSALKLSRLVMLNLDHNQLTTLPDDIGKLESLEYLLMSGNNMDFLPEGLCTLKSLFHLN 286

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNL 195
           +  N + VL     A +  L  L ++++L
Sbjct: 287 ISDNNVEVLP----ADFGKLPRLKSARHL 311



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 3/134 (2%)

Query: 43  EAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNS 102
           E   L+KL L +N +  L  D+  L  L  + +  N++ ELP +  +L  L  L++  N 
Sbjct: 186 EVSTLEKLNLCYNRLTNLPGDVHKLQKLKTMILYGNEIKELPPSALKLSRLVMLNLDHNQ 245

Query: 103 IMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
           +  +PD+IG   +L     S N +  LP  L    +L     S+N +  LP D     ++
Sbjct: 246 LTTLPDDIGKLESLEYLLMSGNNMDFLPEGLCTLKSLFHLNISDNNVEVLPADFGKLPRL 305

Query: 163 S---KLDVEGNKLT 173
                L   GN L 
Sbjct: 306 KSARHLHTHGNPLV 319


>gi|297610977|ref|NP_001065462.2| Os10g0572300 [Oryza sativa Japonica Group]
 gi|255679659|dbj|BAF27299.2| Os10g0572300 [Oryza sativa Japonica Group]
          Length = 396

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 137/278 (49%), Gaps = 4/278 (1%)

Query: 55  NNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSAT 114
           + IE L   L  L  +T L++S N++  LP+ IG L  L  LD+  N ++ +PD  G  +
Sbjct: 80  DQIEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDAFGELS 139

Query: 115 ALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTV 174
            L+  D  +NQLK LPSS G   +L++   S+N + +LP+ L   + + +L VE N+L  
Sbjct: 140 NLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRRLIVETNELEE 199

Query: 175 LSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE 234
           L    I S T L EL    N L  +PE IG L +L  L LH NRI  +P+++     L E
Sbjct: 200 LPYT-IGSCTSLVELRLDFNQLKALPEAIGKLEKLEILTLHYNRIKGLPTTVGSLSRLRE 258

Query: 235 FYMGNNALSALPAELGKLSKLGTLDLHSN--QLKEYCVEACQLR-LSVLDLSNNSLSGLP 291
             +  N +  +P  +   + L  L+L  N   L+        L  L  LD+S+N +  LP
Sbjct: 259 LDVSFNEVEVIPENICFATSLVKLNLSRNFADLRALPKSIGNLEMLEELDISSNQIRVLP 318

Query: 292 PEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYL 329
                ++ LR       PL      +V     A++KY+
Sbjct: 319 DSFRCLSRLRVFHADETPLEFPPREVVKLGAQAVVKYM 356



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 124/255 (48%), Gaps = 4/255 (1%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           D+ +L L+ N I  L   + +L  LT L++  N+L  LP A GEL  L  LD+  N +  
Sbjct: 94  DVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDAFGELSNLIDLDLHANQLKS 153

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P   G+ T+L   D SSN LK LP  LG+  NL       N +  LP  +  C+ + +L
Sbjct: 154 LPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRRLIVETNELEELPYTIGSCTSLVEL 213

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+L  L    I     L  L    N + G+P T+GSLSRL  LD+  N +  IP +
Sbjct: 214 RLDFNQLKALPEA-IGKLEKLEILTLHYNRIKGLPTTVGSLSRLRELDVSFNEVEVIPEN 272

Query: 226 ISGCCSLAEFYMGNNA--LSALPAELGKLSKLGTLDLHSNQLKEYCVE-ACQLRLSVLDL 282
           I    SL +  +  N   L ALP  +G L  L  LD+ SNQ++       C  RL V   
Sbjct: 273 ICFATSLVKLNLSRNFADLRALPKSIGNLEMLEELDISSNQIRVLPDSFRCLSRLRVFHA 332

Query: 283 SNNSLSGLPPEIGKM 297
               L   P E+ K+
Sbjct: 333 DETPLEFPPREVVKL 347



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 137/311 (44%), Gaps = 57/311 (18%)

Query: 101 NSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCS 160
           + I  +P  +G    + + D S N++  LPS++G    L+     +N + +LP+   + S
Sbjct: 80  DQIEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDAFGELS 139

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            +  LD+  N+L  L ++   + T L  L  S N+L  +P+ +G L+ L RL +  N + 
Sbjct: 140 NLIDLDLHANQLKSLPSSF-GNLTSLANLDLSSNMLKALPDCLGKLANLRRLIVETNELE 198

Query: 221 SIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVL 280
            +P +I  C SL E  +  N L ALP  +GKL KL  L LH N++K              
Sbjct: 199 ELPYTIGSCTSLVELRLDFNQLKALPEAIGKLEKLEILTLHYNRIK-------------- 244

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSE 340
                   GLP  +G ++ LR+L ++ N +  +                    PEN    
Sbjct: 245 --------GLPTTVGSLSRLRELDVSFNEVEVI--------------------PEN---- 272

Query: 341 ASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELS 400
                   I  AT  S+    LS    +L A+P  I     + +LD+S N I+ LP    
Sbjct: 273 --------ICFAT--SLVKLNLSRNFADLRALPKSIGNLEMLEELDISSNQIRVLPDSFR 322

Query: 401 SCASLQVKFSD 411
             + L+V  +D
Sbjct: 323 CLSRLRVFHAD 333



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 108/216 (50%), Gaps = 3/216 (1%)

Query: 39  DKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDV 98
           D + E  +L  L L  N ++ L     NL  L  L++S N L  LP  +G+L  L+ L V
Sbjct: 133 DAFGELSNLIDLDLHANQLKSLPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRRLIV 192

Query: 99  SFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLAD 158
             N + ++P  IGS T+LV+     NQLK LP ++G+   L       N I  LP  +  
Sbjct: 193 ETNELEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLEKLEILTLHYNRIKGLPTTVGS 252

Query: 159 CSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL--LNGMPETIGSLSRLIRLDLHQ 216
            S++ +LDV  N++ V+  N I   T L +L  S+N   L  +P++IG+L  L  LD+  
Sbjct: 253 LSRLRELDVSFNEVEVIPEN-ICFATSLVKLNLSRNFADLRALPKSIGNLEMLEELDISS 311

Query: 217 NRILSIPSSISGCCSLAEFYMGNNALSALPAELGKL 252
           N+I  +P S      L  F+     L   P E+ KL
Sbjct: 312 NQIRVLPDSFRCLSRLRVFHADETPLEFPPREVVKL 347


>gi|297294412|ref|XP_001088781.2| PREDICTED: protein LAP2 [Macaca mulatta]
          Length = 1418

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 177/402 (44%), Gaps = 75/402 (18%)

Query: 10  TSGSLNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPL 69
           T  +L+ S+ SL  VP E++  F++            L++L L  N IE+L + L N   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIF-TFEKT-----------LEELYLDANQIEELPKQLFNCQS 70

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L++  N L+ LPA+I  L  L+ LDVS N I + P+ I +   L   + S N + +L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P    + LNL+    ++  +  LP +    +K+  L++  N+L +L              
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML-------------- 176

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
                     P+T+  L++L RLDL  N    +P  +     L EF+M  N L+ +P  +
Sbjct: 177 ----------PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFI 226

Query: 250 GKLSKLGTLDLHSNQLK--EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           G L +L  LD+  N ++  E  + AC+  L  L LS+NSL  LP  IG +  +  L +  
Sbjct: 227 GSLKQLTYLDVSKNNIEMVEEGISACE-NLQDLLLSSNSLQQLPETIGSLKNITTLKIDE 285

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L  L  S+                              LI++        +EL     
Sbjct: 286 NQLIYLPDSIGG----------------------------LISV--------EELDCSFN 309

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKF 409
            + A+PS I +   I       N +Q+LPPE+ S  ++ V F
Sbjct: 310 EVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNVTVLF 351



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 148/316 (46%), Gaps = 48/316 (15%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELP-------------------- 84
           ++L++L ++ N I++  E+++N  +LTV+  S N +S+LP                    
Sbjct: 92  INLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLE 151

Query: 85  ---AAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSD 141
              A  G L  L+ L++  N +  +P  +   T L + D  SN+  E+P  L +   L +
Sbjct: 152 FLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKE 211

Query: 142 FKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPE 201
           F    N +T +P  +    +++ LDV  N + ++    I++   L +L+ S N L  +PE
Sbjct: 212 FWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEG-ISACENLQDLLLSSNSLQQLPE 270

Query: 202 TIGSLSRLIRLDLHQNRILSIPSSISGCCSLAE-----------------------FYMG 238
           TIGSL  +  L + +N+++ +P SI G  S+ E                       F   
Sbjct: 271 TIGSLKNITTLKIDENQLIYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAAD 330

Query: 239 NNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKM 297
           +N L  LP E+G    +  L LHSN+L+    E   + +L V++LS+N L  LP    K+
Sbjct: 331 HNYLQQLPPEIGSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKL 390

Query: 298 TTLRKLLLTGNPLRTL 313
             L  + L+ N  + L
Sbjct: 391 QQLTAMWLSDNQSKPL 406



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 2/247 (0%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ L L  N ++ L + +  L  L  L++  N+ +E+P  + +L  LK   +  N +  I
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFI 222

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P  IGS   L   D S N ++ +   +  C NL D   S+N +  LPE +     ++ L 
Sbjct: 223 PGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLK 282

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           ++ N+L  L ++ I     + EL  S N +  +P +IG L+ +       N +  +P  I
Sbjct: 283 IDENQLIYLPDS-IGGLISVEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEI 341

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               ++   ++ +N L  LP E+G + KL  ++L  N+LK       +L +L+ + LS+N
Sbjct: 342 GSWKNVTVLFLHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDN 401

Query: 286 SLSGLPP 292
               L P
Sbjct: 402 QSKPLIP 408



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 42/240 (17%)

Query: 186 LTELIASKNLLNGMPETIGSLSR-LIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSA 244
           +T L  S   L  +P+ I +  + L  L L  N+I  +P  +  C SL +  + +N L+ 
Sbjct: 24  VTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTT 83

Query: 245 LPAELGKLSKLGTLDLHSNQLKEYC--VEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRK 302
           LPA +  L  L  LD+  N ++E+   ++ C++ L+V++ S N +S LP    ++  L +
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKV-LTVVEASVNPISKLPDGFSQLLNLTQ 142

Query: 303 LLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKEL 362
           L L                  A L++L    P N                T+L +    L
Sbjct: 143 LYLND----------------AFLEFL----PAN------------FGRLTKLQI----L 166

Query: 363 SLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLVTNKESCISG 422
            L    L  +P  +    ++ +LDL  N   E+P  L   + L+  + D   N+ + I G
Sbjct: 167 ELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMD--ANRLTFIPG 224


>gi|161086957|ref|NP_766467.2| leucine-rich repeat and death domain-containing protein 1 [Mus
           musculus]
 gi|341940918|sp|Q8C0R9.2|LRRD1_MOUSE RecName: Full=Leucine-rich repeat and death domain-containing
           protein 1
 gi|187954881|gb|AAI41027.1| RIKEN cDNA 4932412H11 gene [Mus musculus]
 gi|219520514|gb|AAI45171.1| RIKEN cDNA 4932412H11 gene [Mus musculus]
          Length = 853

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 174/364 (47%), Gaps = 18/364 (4%)

Query: 40  KWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVS 99
           K    V+L+ L L+ NNIE+L + +R L  L  L+V+ NK+  +   I  L  +  L+ S
Sbjct: 384 KISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLHVNRNKMITMTEEISHLSNIHILEFS 443

Query: 100 FNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADC 159
            N I  +P EI +   + + + + N +   P  L    +L     + N I+ +P D++  
Sbjct: 444 GNQITHVPIEIKNCRKITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDMSFS 503

Query: 160 SKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRI 219
            ++  L++  NKLTV S +L  S T L  L  +KN +  +P  I ++  L  L L  N+ 
Sbjct: 504 KQLLHLELNRNKLTVFSKHL-CSLTNLEYLDLAKNQIMTIPSCISAMVSLHVLILSDNKF 562

Query: 220 LSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR--- 276
            S P  +    +L    +  N L  +P E+ KL ++  L+L +N    + VE CQL+   
Sbjct: 563 ESFPKELCSLKNLRVLDISENKLQKIPLEISKLKRIQKLNLSNNIFTNFPVELCQLQTLE 622

Query: 277 -LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
            L++   S   L+ LP E+  MT L+ L ++ N ++ +  ++  G   +L+ +       
Sbjct: 623 ELNISQTSGKKLTRLPEEVSHMTQLKILNISNNAIKDIPKNI--GELRSLVSFY------ 674

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQEL 395
                AS  +   +  +       + L L G N++A+PS I++   + +++   N +   
Sbjct: 675 -----ASNNQISSLPSSFLSLEVLQSLDLRGNNMTALPSGIYKLSSLKEINFDDNPLMRP 729

Query: 396 PPEL 399
           P E+
Sbjct: 730 PMEI 733



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 154/361 (42%), Gaps = 38/361 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L  L L  N I  L +++R L  L  L + HNKL+ L   I +L  +K L ++ N +  I
Sbjct: 299 LNSLNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAI 358

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
             +I +   L   +   N L+ +P  +  C+NL     S+N I  LP+ +     + +L 
Sbjct: 359 SPKIENFKELRLLNLDKNLLQSIPKKISHCVNLESLSLSDNNIEELPKKIRKLKNLRQLH 418

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  NK+  ++   I+  + +  L  S N +  +P  I +  ++ R++L+ N I+  P  +
Sbjct: 419 VNRNKMITMTEE-ISHLSNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGL 477

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNN 285
               SL       N +S +P ++    +L  L+L+ N+L  +    C L  L  LDL+ N
Sbjct: 478 CALQSLDYLSFNGNYISEIPVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLEYLDLAKN 537

Query: 286 SLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTK 345
            +  +P  I  M +L  L+L+ N   +    L +      LK LR               
Sbjct: 538 QIMTIPSCISAMVSLHVLILSDNKFESFPKELCS------LKNLRV-------------- 577

Query: 346 EDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
                           L +    L  IP EI +   I KL+LS N     P EL    +L
Sbjct: 578 ----------------LDISENKLQKIPLEISKLKRIQKLNLSNNIFTNFPVELCQLQTL 621

Query: 406 Q 406
           +
Sbjct: 622 E 622



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 167/370 (45%), Gaps = 24/370 (6%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L +L++  N LS +P  I   H LK L+ S+N I +IP E+     + +   +SN +  L
Sbjct: 184 LEILSLQENGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTL 243

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           PS L     L       N +T +P+ L+    +  L++E N+LT+ S +L      L  L
Sbjct: 244 PSGLEHLRYLETLSLGKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSL-CFLPKLNSL 302

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
             + N++  +P+ +  L  L  L +  N++  +   I     + E ++ +N L A+  ++
Sbjct: 303 NLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQLPKIKELHLADNKLEAISPKI 362

Query: 250 GKLSKLGTLDLHSNQLK------EYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKL 303
               +L  L+L  N L+       +CV      L  L LS+N++  LP +I K+  LR+L
Sbjct: 363 ENFKELRLLNLDKNLLQSIPKKISHCV-----NLESLSLSDNNIEELPKKIRKLKNLRQL 417

Query: 304 LLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE--------NEDSEASTTKEDLITMATRL 355
            +  N + T+   + +     +L++  +++           + +       +++     L
Sbjct: 418 HVNRNKMITMTEEISHLSNIHILEFSGNQITHVPIEIKNCRKITRVELNYNNIMYFPVGL 477

Query: 356 SVTS--KELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSDLV 413
                   LS  G  +S IP ++  + ++  L+L+RN +      L S  +L+  + DL 
Sbjct: 478 CALQSLDYLSFNGNYISEIPVDMSFSKQLLHLELNRNKLTVFSKHLCSLTNLE--YLDLA 535

Query: 414 TNKESCISGC 423
            N+   I  C
Sbjct: 536 KNQIMTIPSC 545



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 4/208 (1%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L+++ N++  +P+ I  +  L  L +S N     P E+ S   L   D S N+L+++
Sbjct: 529 LEYLDLAKNQIMTIPSCISAMVSLHVLILSDNKFESFPKELCSLKNLRVLDISENKLQKI 588

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE---GNKLTVLSNNLIASWTML 186
           P  + +   +     SNN  T+ P +L     + +L++    G KLT L    ++  T L
Sbjct: 589 PLEISKLKRIQKLNLSNNIFTNFPVELCQLQTLEELNISQTSGKKLTRLPEE-VSHMTQL 647

Query: 187 TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
             L  S N +  +P+ IG L  L+      N+I S+PSS      L    +  N ++ALP
Sbjct: 648 KILNISNNAIKDIPKNIGELRSLVSFYASNNQISSLPSSFLSLEVLQSLDLRGNNMTALP 707

Query: 247 AELGKLSKLGTLDLHSNQLKEYCVEACQ 274
           + + KLS L  ++   N L    +E C+
Sbjct: 708 SGIYKLSSLKEINFDDNPLMRPPMEICK 735



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 51/104 (49%)

Query: 59  KLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVK 118
           +L E++ ++  L +LN+S+N + ++P  IGEL  L S   S N I  +P    S   L  
Sbjct: 636 RLPEEVSHMTQLKILNISNNAIKDIPKNIGELRSLVSFYASNNQISSLPSSFLSLEVLQS 695

Query: 119 FDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKM 162
            D   N +  LPS + +  +L +    +N +   P ++    +M
Sbjct: 696 LDLRGNNMTALPSGIYKLSSLKEINFDDNPLMRPPMEICKGKEM 739


>gi|326512638|dbj|BAJ99674.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1320

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 171/356 (48%), Gaps = 41/356 (11%)

Query: 2   DRILKAARTSGSLNLSNRSLRDVPNEVYK-------NFDEAGEGDKW----WEAVDLQKL 50
           D +L+  RT   L L    L+D+P  VY+        F +  E  +      + V+L++L
Sbjct: 29  DDVLRYTRTLEELLLDANQLQDLPKGVYRLTQLRRLTFSD-NEIQRILPDIGQLVNLEEL 87

Query: 51  ILAHNNIEKLKEDLRNLPLLTVLNVSHN------------------------KLSELPAA 86
             + N+I ++ +++R+   L  L+ S N                         L+ELP  
Sbjct: 88  DCSRNDIAEIPDNIRHCRSLQKLDFSGNPLANNLPSGIIHLRQLRQLILNDVSLAELPRE 147

Query: 87  IGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASN 146
           IG L  L  L++  N +  +PD +   T L   D  SN L++LP+ +G   +L +F   +
Sbjct: 148 IGSLSNLCVLEIRENLLKTLPDSLVQLTRLESLDLGSNVLEQLPNHIGHLQSLKEFWLDS 207

Query: 147 NCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSL 206
           N +T LP D+     +  LDV  NKLT L +  I     LT L  S N +  +P+TIG L
Sbjct: 208 NELTELPRDIGQLKHLQCLDVSENKLTYLPDE-IGDLESLTNLELSANHVEELPKTIGQL 266

Query: 207 -SRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQL 265
             RL+ L ++ N +  +   I  C +L E  +  NAL+ LP  +G L  L  L++  NQL
Sbjct: 267 KDRLLILKINSNSLTRLCEEIGQCSALTELILTENALTELPKTIGNLKNLTNLNIDRNQL 326

Query: 266 KEYCVE--ACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
               VE   C+  L +L L +N L+ +P E+ ++  L  L L+GN L  L  +L++
Sbjct: 327 AYLPVEIAGCE-SLGMLSLRDNRLTHIPSELSQLKHLHVLDLSGNRLLNLPCTLLD 381



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 169/368 (45%), Gaps = 49/368 (13%)

Query: 46  DLQKLILAHNNIEKLKED-LRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           +L+++   H N+  + +D LR    L  L +  N+L +LP  +  L  L+ L  S N I 
Sbjct: 13  NLEQIDKRHCNLTAVPDDVLRYTRTLEELLLDANQLQDLPKGVYRLTQLRRLTFSDNEIQ 72

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
           +I  +IG    L + DCS N + E+                       P+++  C  + K
Sbjct: 73  RILPDIGQLVNLEELDCSRNDIAEI-----------------------PDNIRHCRSLQK 109

Query: 165 LDVEGNKLTVLSNNL---IASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILS 221
           LD  GN L   +NNL   I     L +LI +   L  +P  IGSLS L  L++ +N + +
Sbjct: 110 LDFSGNPL---ANNLPSGIIHLRQLRQLILNDVSLAELPREIGSLSNLCVLEIRENLLKT 166

Query: 222 IPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVL 280
           +P S+     L    +G+N L  LP  +G L  L    L SN+L E   +  QL+ L  L
Sbjct: 167 LPDSLVQLTRLESLDLGSNVLEQLPNHIGHLQSLKEFWLDSNELTELPRDIGQLKHLQCL 226

Query: 281 DLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSR---LPENE 337
           D+S N L+ LP EIG + +L  L L+ N +  L         P  +  L+ R   L  N 
Sbjct: 227 DVSENKLTYLPDEIGDLESLTNLELSANHVEEL---------PKTIGQLKDRLLILKINS 277

Query: 338 DSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
           +S     +E  I   + L+    EL L    L+ +P  I     +T L++ RN +  LP 
Sbjct: 278 NSLTRLCEE--IGQCSALT----ELILTENALTELPKTIGNLKNLTNLNIDRNQLAYLPV 331

Query: 398 ELSSCASL 405
           E++ C SL
Sbjct: 332 EIAGCESL 339



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 168/359 (46%), Gaps = 17/359 (4%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L+L  N ++ L + +  L  L  L  S N++  +   IG+L  L+ LD S N I +I
Sbjct: 38  LEELLLDANQLQDLPKGVYRLTQLRRLTFSDNEIQRILPDIGQLVNLEELDCSRNDIAEI 97

Query: 107 PDEIGSATALVKFDCSSNQL-KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           PD I    +L K D S N L   LPS +     L     ++  +  LP ++   S +  L
Sbjct: 98  PDNIRHCRSLQKLDFSGNPLANNLPSGIIHLRQLRQLILNDVSLAELPREIGSLSNLCVL 157

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
           ++  N L  L ++L+   T L  L    N+L  +P  IG L  L    L  N +  +P  
Sbjct: 158 EIRENLLKTLPDSLV-QLTRLESLDLGSNVLEQLPNHIGHLQSLKEFWLDSNELTELPRD 216

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL--RLSVLDLS 283
           I     L    +  N L+ LP E+G L  L  L+L +N ++E      QL  RL +L ++
Sbjct: 217 IGQLKHLQCLDVSENKLTYLPDEIGDLESLTNLELSANHVEELPKTIGQLKDRLLILKIN 276

Query: 284 NNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEAST 343
           +NSL+ L  EIG+ + L +L+LT N L  L  ++ N      L   R++L       A  
Sbjct: 277 SNSLTRLCEEIGQCSALTELILTENALTELPKTIGNLKNLTNLNIDRNQL-------AYL 329

Query: 344 TKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSC 402
             E  I     L +    LSL    L+ IPSE+ +   +  LDLS N +  LP  L  C
Sbjct: 330 PVE--IAGCESLGM----LSLRDNRLTHIPSELSQLKHLHVLDLSGNRLLNLPCTLLDC 382



 Score = 43.5 bits (101), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 15/178 (8%)

Query: 231 SLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSG 289
           +L E  +  N L  LP  + +L++L  L    N+++    +  QL  L  LD S N ++ 
Sbjct: 37  TLEELLLDANQLQDLPKGVYRLTQLRRLTFSDNEIQRILPDIGQLVNLEELDCSRNDIAE 96

Query: 290 LPPEIGKMTTLRKLLLTGNPL-RTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDL 348
           +P  I    +L+KL  +GNPL   L S +++      L+ LR +L  N+ S A   +E  
Sbjct: 97  IPDNIRHCRSLQKLDFSGNPLANNLPSGIIH------LRQLR-QLILNDVSLAELPRE-- 147

Query: 349 ITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQ 406
           I   + L V    L +    L  +P  + +   +  LDL  N +++LP  +    SL+
Sbjct: 148 IGSLSNLCV----LEIRENLLKTLPDSLVQLTRLESLDLGSNVLEQLPNHIGHLQSLK 201


>gi|90399332|emb|CAH68341.1| H0313F03.16 [Oryza sativa Indica Group]
          Length = 1174

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 127/382 (33%), Positives = 188/382 (49%), Gaps = 24/382 (6%)

Query: 47  LQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI- 103
           LQ+L L  N +   +   L NL  LT+L +S N LS  LPA+IG L  L+ L V  NS+ 
Sbjct: 331 LQRLSLHANRLAGTVPASLTNLVNLTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLS 390

Query: 104 MKIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCSK 161
            +IP  I + T L     S N     LP+ LGR  +L       N +   +P+DL DC +
Sbjct: 391 GQIPASISNCTQLANASMSFNLFSGPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQ 450

Query: 162 MSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNG-MPETIGSLSRLIRLDLHQNRIL 220
           + KLD+  N  T   +  +     LT L    N L+G +PE IG+L++LI L L +NR  
Sbjct: 451 LQKLDLSENSFTGGLSRRVGQLGNLTVLQLQGNALSGEIPEEIGNLTKLISLKLGRNRFA 510

Query: 221 S-IPSSISGCCSLAEFYMGNNALSAL-PAELGKLSKLGTLDLHSNQLKEYCVEA-CQLR- 276
             +P+SIS   SL    +G+N L  + PAE+ +L +L  L   SN+      +A   LR 
Sbjct: 511 GHVPASISNMSSLQLLDLGHNRLDGMFPAEVFELRQLTILGAGSNRFAGPIPDAVANLRS 570

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPE 335
           LS LDLS+N L+G +P  +G++  L  L L+ N L       V      +  YL   L  
Sbjct: 571 LSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRLAGAIPGAVIASMSNVQMYL--NLSN 628

Query: 336 NEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQ-E 394
           N  + A   +   + M   + +++ +LS        +P+ +     +  LDLS NS+  E
Sbjct: 629 NAFTGAIPAEIGGLVMVQTIDLSNNQLS------GGVPATLAGCKNLYSLDLSGNSLTGE 682

Query: 395 LP----PELSSCASLQVKFSDL 412
           LP    P+L    +L +  +DL
Sbjct: 683 LPANLFPQLDLLTTLNISGNDL 704



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 181/411 (44%), Gaps = 72/411 (17%)

Query: 46  DLQKLILAHNNIEK-LKEDLRNLPLLTVLNVSHNKLS-ELPAAIGELHMLKSLDVSFNSI 103
           +L++L+++ N     +   L N   +  L ++ N L+  +P+ IG+L  L+  +   N++
Sbjct: 138 ELEQLVVSSNYFAGGIPSSLCNCSAMWALALNVNNLTGAIPSCIGDLSNLEIFEAYLNNL 197

Query: 104 -MKIPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCITS-LPEDLADCS 160
             ++P  +     ++  D S NQL   +P  +G   NL   +   N  +  +P +L  C 
Sbjct: 198 DGELPPSMAKLKGIMVVDLSCNQLSGSIPPEIGDLSNLQILQLYENRFSGHIPRELGRCK 257

Query: 161 KMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRIL 220
            ++ L++  N  T                         +P  +G L+ L  + L++N + 
Sbjct: 258 NLTLLNIFSNGFT-----------------------GEIPGELGELTNLEVMRLYKNALT 294

Query: 221 S-IPSSISGCCSLAEFYMGNNALSA-LPAELGKLSKLGTLDLHSNQLKEYCVEACQ--LR 276
           S IP S+  C SL    +  N L+  +P ELG+L  L  L LH+N+L      +    + 
Sbjct: 295 SEIPRSLRRCVSLLNLDLSMNQLAGPIPPELGELPSLQRLSLHANRLAGTVPASLTNLVN 354

Query: 277 LSVLDLSNNSLSG-LPPEIGKMTTLRKLLLTGNPLR----------------TLRSSLVN 319
           L++L+LS N LSG LP  IG +  LR+L++  N L                 ++  +L +
Sbjct: 355 LTILELSENHLSGPLPASIGSLRNLRRLIVQNNSLSGQIPASISNCTQLANASMSFNLFS 414

Query: 320 GPTPALLKYLRS--RLPENEDSEASTTKEDLI-------------TMATRLSVTSKELS- 363
           GP PA L  L+S   L   ++S A    +DL              +    LS    +L  
Sbjct: 415 GPLPAGLGRLQSLMFLSLGQNSLAGDIPDDLFDCGQLQKLDLSENSFTGGLSRRVGQLGN 474

Query: 364 -----LEGMNLSA-IPSEIWEAGEITKLDLSRNSIQ-ELPPELSSCASLQV 407
                L+G  LS  IP EI    ++  L L RN     +P  +S+ +SLQ+
Sbjct: 475 LTVLQLQGNALSGEIPEEIGNLTKLISLKLGRNRFAGHVPASISNMSSLQL 525



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 124/289 (42%), Gaps = 20/289 (6%)

Query: 38  GDKWWEAVDLQKLI---LAHNNIE-KLKEDLRNLPLLTVLNVSHNKLSEL-PAAIGELHM 92
           G+   E  +L KLI   L  N     +   + N+  L +L++ HN+L  + PA + EL  
Sbjct: 487 GEIPEEIGNLTKLISLKLGRNRFAGHVPASISNMSSLQLLDLGHNRLDGMFPAEVFELRQ 546

Query: 93  LKSLDVSFNSIMK-IPDEIGSATALVKFDCSSNQLK-ELPSSLGRCLNLSDFKASNNCIT 150
           L  L    N     IPD + +  +L   D SSN L   +P++LGR   L     S+N + 
Sbjct: 547 LTILGAGSNRFAGPIPDAVANLRSLSFLDLSSNMLNGTVPAALGRLDQLLTLDLSHNRLA 606

Query: 151 -SLPEDLADCSKMSK----LDVEGNKLTVLSNNLIASWTMLTELIASKNLL-NGMPETIG 204
            ++P   A  + MS     L++  N  T      I    M+  +  S N L  G+P T+ 
Sbjct: 607 GAIPG--AVIASMSNVQMYLNLSNNAFTGAIPAEIGGLVMVQTIDLSNNQLSGGVPATLA 664

Query: 205 SLSRLIRLDLHQNRILS-IPSSISGCCSLAEF--YMGNNALSALPAELGKLSKLGTLDLH 261
               L  LDL  N +   +P+++     L       GN+    +PA++  L  + TLD+ 
Sbjct: 665 GCKNLYSLDLSGNSLTGELPANLFPQLDLLTTLNISGNDLDGEIPADIAALKHIQTLDVS 724

Query: 262 SNQLKEYCVEACQ--LRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGN 308
            N        A      L  L+LS+N+  G  P+ G    L    L GN
Sbjct: 725 RNAFAGAIPPALANLTALRSLNLSSNTFEGPVPDGGVFGNLTMSSLQGN 773


>gi|260788688|ref|XP_002589381.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
 gi|229274558|gb|EEN45392.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
          Length = 1697

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 179/410 (43%), Gaps = 27/410 (6%)

Query: 14  LNLSNRSLRDVPNEVYKNFDEAGEGDKWWEAVDLQKLILAHNNIEKLKEDLRNLPLLTVL 73
           L+LSN+ L  +P EV+             +  DL+ L +++N +  + E +  L  L  L
Sbjct: 18  LDLSNQGLTSIPEEVF-------------DITDLEFLDVSNNKLTSIPEAVGRLQKLYRL 64

Query: 74  NVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSL 133
           +  +N L+ LP AIG L  L  L +  N +  +P  +     L K    +NQL   PS +
Sbjct: 65  DADYNTLTSLPQAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSGV 124

Query: 134 GRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASK 193
               NL   + S N + + P  +    K+  L + GN+LT +    +     L  L  S 
Sbjct: 125 CSLPNLEVLEVSYNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPG-VCLLPNLEVLSVSN 183

Query: 194 NLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLS 253
           N L+  P  +  L +L  L ++ N++  +PS +    +L    + NN LS  P  + KL 
Sbjct: 184 NKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNLSTFPPGVEKLQ 243

Query: 254 KLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRT 312
           KL  L ++ NQL E     C L  +  L +SNN+LS  PP   K+  LR+L +  N L  
Sbjct: 244 KLRELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLSTFPPGGEKLQKLRELYINDNQLTE 303

Query: 313 LRSSLVN-----------GPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKE 361
           + S + +            P  +L  Y+ +RL   +       + D          T +E
Sbjct: 304 VPSGVCSLPNLEVLGVGKNPIRSLPDYV-TRLARLKTLSVPNCQLDEFPRQVLQLKTLEE 362

Query: 362 LSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQVKFSD 411
           L   G     +P E+     +  L L +N ++ LP  +S   +L+  + D
Sbjct: 363 LYAGGCKFDIVPDEVGSLQHLWYLALDKNLLKTLPSTMSHLHNLREVYLD 412



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 166/351 (47%), Gaps = 25/351 (7%)

Query: 49   KLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPD 108
            KL L++  +  + E++ ++  L VL+VS+NKL+ +P AIG L  L  LD   N +  +P 
Sbjct: 928  KLDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTSIPEAIGRLQKLYRLDADGNMLTSLPQ 987

Query: 109  EIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVE 168
             IGS   L+      NQL E+PS +    NL      NN +++ P  +    K+  L + 
Sbjct: 988  AIGSLQKLIHLYIYDNQLTEVPSGVCSLPNLEVLNVYNNKLSTFPPGVEKLQKLGTLYIN 1047

Query: 169  GNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISG 228
            G  + +L N        L  L    N L+  P  +  L +L  L +  N++  +PS +  
Sbjct: 1048 G--VCLLPN--------LEVLSVGNNKLSTFPPGVEKLQKLRELYIRDNQLTEVPSGVCS 1097

Query: 229  CCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSL 287
              +L    +G N +  LP  + +L++L TL + + Q  E+  +  QL+ +  L       
Sbjct: 1098 LPNLEVLSVGKNPIRRLPDYVTRLARLKTLSVSNCQFAEFPRQVQQLKIMEELYAGGCKF 1157

Query: 288  SGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKED 347
              +P E+G +  L+ L L  N L+TL S++ +      L  LR      +D++  T  E 
Sbjct: 1158 DIVPDEVGSLQHLQVLALDKNLLKTLPSTMSH------LHNLREVY--LDDNKFGTFPEV 1209

Query: 348  LITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPE 398
            L  +        ++L +   N++ +P+ +  A ++  LD+S N +   PP+
Sbjct: 1210 LCELP-----AMEKLDISKNNITRLPTALHRADKLKHLDVSGNPL-TYPPQ 1254



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 129/282 (45%), Gaps = 15/282 (5%)

Query: 117 VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
           +K D S+  L  +P  +    +L     SNN +TS+PE +    K+ +LD + N LT L 
Sbjct: 16  LKLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAVGRLQKLYRLDADYNTLTSLP 75

Query: 177 NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
              I S   LT L    N L+ +P  +  L +L +L +  N++   PS +    +L    
Sbjct: 76  QA-IGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSGVCSLPNLEVLE 134

Query: 237 MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
           +  N L   P  + KL KL TL ++ NQL E     C L  L VL +SNN LS  PP + 
Sbjct: 135 VSYNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNKLSTFPPGVE 194

Query: 296 KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRL 355
           K+  LR+L + GN L  + S + + P   +L    + L     S      E L  +    
Sbjct: 195 KLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNL-----STFPPGVEKLQKL---- 245

Query: 356 SVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPP 397
               +EL + G  L+ +P  +     I  L +S N++   PP
Sbjct: 246 ----RELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLSTFPP 283



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 127/295 (43%), Gaps = 53/295 (17%)

Query: 117  VKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLS 176
            +K D S+  L  +P  +    +L     SNN +TS+PE +    K+ +LD +GN LT L 
Sbjct: 927  LKLDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTSIPEAIGRLQKLYRLDADGNMLTSL- 985

Query: 177  NNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFY 236
                                   P+ IGSL +LI L ++ N++  +PS +    +L    
Sbjct: 986  -----------------------PQAIGSLQKLIHLYIYDNQLTEVPSGVCSLPNLEVLN 1022

Query: 237  MGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLPPEIG 295
            + NN LS  P  + KL KLGTL         Y    C L  L VL + NN LS  PP + 
Sbjct: 1023 VYNNKLSTFPPGVEKLQKLGTL---------YINGVCLLPNLEVLSVGNNKLSTFPPGVE 1073

Query: 296  KMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRS---RLPENEDSEASTTKEDLITMA 352
            K+  LR+L +  N L  + S + + P   +L   ++   RLP            D +T  
Sbjct: 1074 KLQKLRELYIRDNQLTEVPSGVCSLPNLEVLSVGKNPIRRLP------------DYVTRL 1121

Query: 353  TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
             RL    K LS+     +  P ++ +   + +L         +P E+ S   LQV
Sbjct: 1122 ARL----KTLSVSNCQFAEFPRQVQQLKIMEELYAGGCKFDIVPDEVGSLQHLQV 1172



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 144/328 (43%), Gaps = 25/328 (7%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L+ L + +NN+      +  L  L  L +  N+L+E+P  +  L  ++ L VS N++  
Sbjct: 221 NLEVLSVYNNNLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLST 280

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            P        L +   + NQL E+PS +    NL       N I SLP+ +   +++  L
Sbjct: 281 FPPGGEKLQKLRELYINDNQLTEVPSGVCSLPNLEVLGVGKNPIRSLPDYVTRLARLKTL 340

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            V   +L      ++   T L EL A     + +P+ +GSL  L  L L +N + ++PS+
Sbjct: 341 SVPNCQLDEFPRQVLQLKT-LEELYAGGCKFDIVPDEVGSLQHLWYLALDKNLLKTLPST 399

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQL-RLSVLDLSN 284
           +S   +L E Y+ +N     P  L                       C+L  +  LD+S 
Sbjct: 400 MSHLHNLREVYLDDNKFGTFPEVL-----------------------CELPAMEKLDISK 436

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N+++ LP  + +   L+ L ++GNPL      +    T A++ +L+    ++E    +  
Sbjct: 437 NNITRLPTALHRADKLKHLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEAEKDERILRAFN 496

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAI 372
           +  +    T+    ++ L L    + AI
Sbjct: 497 RLSVKASQTQWKPLARSLGLSNRAMDAI 524



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 1/208 (0%)

Query: 67   LPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQL 126
            LP L VL+V +NKLS  P  + +L  L+ L +  N + ++P  + S   L       N +
Sbjct: 1052 LPNLEVLSVGNNKLSTFPPGVEKLQKLRELYIRDNQLTEVPSGVCSLPNLEVLSVGKNPI 1111

Query: 127  KELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTML 186
            + LP  + R   L     SN      P  +     M +L   G K  ++ +  + S   L
Sbjct: 1112 RRLPDYVTRLARLKTLSVSNCQFAEFPRQVQQLKIMEELYAGGCKFDIVPDE-VGSLQHL 1170

Query: 187  TELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALP 246
              L   KNLL  +P T+  L  L  + L  N+  + P  +    ++ +  +  N ++ LP
Sbjct: 1171 QVLALDKNLLKTLPSTMSHLHNLREVYLDDNKFGTFPEVLCELPAMEKLDISKNNITRLP 1230

Query: 247  AELGKLSKLGTLDLHSNQLKEYCVEACQ 274
              L +  KL  LD+  N L     + C+
Sbjct: 1231 TALHRADKLKHLDVSGNPLTYPPQDVCK 1258



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 14/215 (6%)

Query: 46   DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
            +L+ L +  N I +L + +  L  L  L+VS+ + +E P  + +L +++ L         
Sbjct: 1100 NLEVLSVGKNPIRRLPDYVTRLARLKTLSVSNCQFAEFPRQVQQLKIMEELYAGGCKFDI 1159

Query: 106  IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            +PDE+GS   L       N LK LPS++    NL +    +N   + PE L +   M KL
Sbjct: 1160 VPDEVGSLQHLQVLALDKNLLKTLPSTMSHLHNLREVYLDDNKFGTFPEVLCELPAMEKL 1219

Query: 166  DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETI-----GSLSRLIRLDLHQN-RI 219
            D+  N +T L   L  +   L  L  S N L   P+ +     G++   ++ +  ++ RI
Sbjct: 1220 DISKNNITRLPTALHRA-DKLKHLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEAEKDERI 1278

Query: 220  LSIPSSISGCCSLAEFY-------MGNNALSALPA 247
            L + + +S   S  ++        + N A+ A+ A
Sbjct: 1279 LRVFNRLSVKASQTQWKPLARSLGLSNRAMDAIKA 1313



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 1/206 (0%)

Query: 46   DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
            +L+ L + +N +      +  L  L  L +  N+L+E+P+ +  L  L+ L V  N I +
Sbjct: 1054 NLEVLSVGNNKLSTFPPGVEKLQKLRELYIRDNQLTEVPSGVCSLPNLEVLSVGKNPIRR 1113

Query: 106  IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
            +PD +     L     S+ Q  E P  + +   + +  A       +P+++     +  L
Sbjct: 1114 LPDYVTRLARLKTLSVSNCQFAEFPRQVQQLKIMEELYAGGCKFDIVPDEVGSLQHLQVL 1173

Query: 166  DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
             ++ N L  L + + +    L E+    N     PE +  L  + +LD+ +N I  +P++
Sbjct: 1174 ALDKNLLKTLPSTM-SHLHNLREVYLDDNKFGTFPEVLCELPAMEKLDISKNNITRLPTA 1232

Query: 226  ISGCCSLAEFYMGNNALSALPAELGK 251
            +     L    +  N L+  P ++ K
Sbjct: 1233 LHRADKLKHLDVSGNPLTYPPQDVCK 1258



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 27/136 (19%)

Query: 196  LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
            LN  P+T+      ++LDL    + SIP  +     L    + NN L+++P  +G+L KL
Sbjct: 916  LNLQPQTVNGR---LKLDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTSIPEAIGRLQKL 972

Query: 256  GTLD-----------------------LHSNQLKEYCVEACQL-RLSVLDLSNNSLSGLP 291
              LD                       ++ NQL E     C L  L VL++ NN LS  P
Sbjct: 973  YRLDADGNMLTSLPQAIGSLQKLIHLYIYDNQLTEVPSGVCSLPNLEVLNVYNNKLSTFP 1032

Query: 292  PEIGKMTTLRKLLLTG 307
            P + K+  L  L + G
Sbjct: 1033 PGVEKLQKLGTLYING 1048


>gi|28302239|gb|AAH46591.1| Lrrc1 protein, partial [Mus musculus]
          Length = 596

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/240 (35%), Positives = 125/240 (52%), Gaps = 24/240 (10%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           L++L L +N I  L E +  L  L  L +  N+LSELP  IG L  L  LDVS N + ++
Sbjct: 248 LEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERL 307

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           P+EI   T+L     S N L+ +P  +G+   LS  K   N +T LPE + DC       
Sbjct: 308 PEEISGLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCEN----- 362

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
                              LTEL+ ++N L  +P++IG L +L  L+  +N+++S+P  I
Sbjct: 363 -------------------LTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 403

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNNS 286
            GCCSL  F + +N L+ LPAE+ +  +L  LD+  N+L    +    L+L  L LS+N 
Sbjct: 404 GGCCSLTMFCIRDNRLTRLPAEVSQAVELHVLDVAGNRLHHLPLSLTTLKLKALWLSDNQ 463



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 155/330 (46%), Gaps = 40/330 (12%)

Query: 78  NKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKELPSSLGRC- 136
           N+L ELP    +L  L+ L +S N I ++P EI +   LV+ D S N + E+P S+  C 
Sbjct: 118 NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCK 177

Query: 137 -LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNL 195
            L ++DF  S N +T LPE   +   ++ L V    L  L  N I +   L  L   +NL
Sbjct: 178 ALQVADF--SGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN-IGNLYNLASLELRENL 234

Query: 196 LNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKL 255
           L  +P+++  L RL  LDL  N I ++P SI     L + ++  N LS LP E+G L  L
Sbjct: 235 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNL 294

Query: 256 GTLDLHSNQLKEYCVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRS 315
                        C          LD+S N L  LP EI  +T+L  L+++ N L T+  
Sbjct: 295 ------------LC----------LDVSENRLERLPEEISGLTSLTYLVISQNLLETIPE 332

Query: 316 SLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            +      ++LK  ++RL   +  EA    E+L            EL L    L  +P  
Sbjct: 333 GIGKLKKLSILKLDQNRL--TQLPEAIGDCENLT-----------ELVLTENRLLTLPKS 379

Query: 376 IWEAGEITKLDLSRNSIQELPPELSSCASL 405
           I +  +++ L+  RN +  LP E+  C SL
Sbjct: 380 IGKLKKLSNLNADRNKLVSLPKEIGGCCSL 409



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 104/229 (45%), Gaps = 26/229 (11%)

Query: 93  LKSLDVSFNSIMKIPDEIGS-ATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITS 151
           ++++D    S++ +P+EI   A +L +    +NQL+ELP    + + L     S+N I  
Sbjct: 86  VEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQR 145

Query: 152 LPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIR 211
           LP ++A+  ++ +LDV                        S+N +  +PE+I     L  
Sbjct: 146 LPPEIANFMQLVELDV------------------------SRNDIPEIPESIAFCKALQV 181

Query: 212 LDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE 271
            D   N +  +P S     +L    + + +L +LP  +G L  L +L+L  N L      
Sbjct: 182 ADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDS 241

Query: 272 ACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVN 319
             QLR L  LDL NN +  LP  IG +  L+ L L GN L  L   + N
Sbjct: 242 LTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGN 290



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 14/221 (6%)

Query: 186 LTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSAL 245
           L EL+   N L  +PE    L +L +L L  N I  +P  I+    L E  +  N +  +
Sbjct: 110 LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEI 169

Query: 246 PAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPPEIGKMTTLRKLL 304
           P  +     L   D   N L        +L+ L+ L +++ SL  LP  IG +  L  L 
Sbjct: 170 PESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLE 229

Query: 305 LTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSL 364
           L  N L  L  SL       L +     L  NE      +   L+ +        K+L L
Sbjct: 230 LRENLLTYLPDSLTQ-----LRRLEELDLGNNEIYNLPESIGALLHL--------KDLWL 276

Query: 365 EGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASL 405
           +G  LS +P EI     +  LD+S N ++ LP E+S   SL
Sbjct: 277 DGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 317


>gi|149019125|gb|EDL77766.1| similar to RIKEN cDNA A430093J20 gene, isoform CRA_c [Rattus
           norvegicus]
          Length = 443

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 162/331 (48%), Gaps = 17/331 (5%)

Query: 47  LQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKI 106
           LQ    + N + +L E    L  LT L+V+   L  LP  IG L+ L SL++  N +  +
Sbjct: 26  LQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYL 85

Query: 107 PDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLD 166
           PD +     L + D  +N++  LP S+G  L+L D     N ++ LP+++ +   +  LD
Sbjct: 86  PDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLCLD 145

Query: 167 VEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSI 226
           V  N+L  L    I+    LT+L+ S+NLL  +P+ IG L +L  L L QNR+  +P +I
Sbjct: 146 VSENRLERLPEE-ISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAI 204

Query: 227 SGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVE--ACQLRLSVLDLSN 284
             C +L E  +  N L  LP  +GKL KL  L+   N+L     E   C   L+V  + +
Sbjct: 205 GDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGC-CSLTVFCIRD 263

Query: 285 NSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTT 344
           N L+ +P E+ +   L  L + GN L  L  SL      AL       L +N+       
Sbjct: 264 NRLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTLKLKALW------LSDNQ------- 310

Query: 345 KEDLITMATRLSVTSKELSLEGMNLSAIPSE 375
            + L+T  T +  T+ E  L  + L  +PSE
Sbjct: 311 SQPLLTFQTDVDHTTGEKILTCVLLPQMPSE 341



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 135/241 (56%), Gaps = 1/241 (0%)

Query: 46  DLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMK 105
           +L  L L  N +  L + L  L  L  L++ +N++  LP +IG L  LK L +  N + +
Sbjct: 71  NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSE 130

Query: 106 IPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKL 165
           +P EIG+   L+  D S N+L+ LP  +   ++L+D   S N + ++P+ +    K+S L
Sbjct: 131 LPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLSIL 190

Query: 166 DVEGNKLTVLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSS 225
            ++ N+LT L    I     LTEL+ ++N L  +P +IG L +L  L+  +N+++S+P  
Sbjct: 191 KLDQNRLTQLP-EAIGDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKE 249

Query: 226 ISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLRLSVLDLSNN 285
           I GCCSL  F + +N L+ +P+E+ +  +L  LD+  N+L    +    L+L  L LS+N
Sbjct: 250 IGGCCSLTVFCIRDNRLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTLKLKALWLSDN 309

Query: 286 S 286
            
Sbjct: 310 Q 310



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 156/334 (46%), Gaps = 40/334 (11%)

Query: 70  LTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIMKIPDEIGSATALVKFDCSSNQLKEL 129
           L  L+VS N + E+P +I     L+  D S N + ++P+       L     +   L+ L
Sbjct: 3   LVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 62

Query: 130 PSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLTVLSNNLIASWTMLTEL 189
           P ++G   NL+  +   N +T LP+ L    ++ +LD+  N++  L  + I +   L +L
Sbjct: 63  PENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPES-IGALLHLKDL 121

Query: 190 IASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAEL 249
               N L+ +P+ IG+L  L+ LD+ +NR+  +P  ISG  SL +  +  N L  +P  +
Sbjct: 122 WLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGI 181

Query: 250 GKLSKLGTLDLHSNQLKEY--CVEACQLRLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTG 307
           GKL KL  L L  N+L +    +  C+  L+ L L+ N L  LP  IGK+  L       
Sbjct: 182 GKLKKLSILKLDQNRLTQLPEAIGDCE-NLTELVLTENRLLTLPTSIGKLKKL------- 233

Query: 308 NPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGM 367
           N L   R+ LV+ P                       KE  I     L+V      +   
Sbjct: 234 NNLNADRNKLVSLP-----------------------KE--IGGCCSLTV----FCIRDN 264

Query: 368 NLSAIPSEIWEAGEITKLDLSRNSIQELPPELSS 401
            L+ IPSE+ +A E+  LD++ N +  LP  L++
Sbjct: 265 RLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTT 298



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 137/295 (46%), Gaps = 42/295 (14%)

Query: 116 LVKFDCSSNQLKELPSSLGRC--LNLSDFKASNNCITSLPEDLADCSKMSKLDVEGNKLT 173
           LV+ D S N + E+P S+  C  L ++DF  S N +T LPE             E   LT
Sbjct: 3   LVELDVSRNDIPEIPESISFCKALQVADF--SGNPLTRLPESFP----------ELQNLT 50

Query: 174 VLSNNLIASWTMLTELIASKNLLNGMPETIGSLSRLIRLDLHQNRILSIPSSISGCCSLA 233
            LS N I+              L  +PE IG+L  L  L+L +N +  +P S++    L 
Sbjct: 51  CLSVNDIS--------------LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLE 96

Query: 234 EFYMGNNALSALPAELGKLSKLGTLDLHSNQLKEYCVEACQLR-LSVLDLSNNSLSGLPP 292
           E  +GNN + +LP  +G L  L  L L  NQL E   E   LR L  LD+S N L  LP 
Sbjct: 97  ELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPE 156

Query: 293 EIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALLKYLRSRLPENEDSEASTTKEDLITMA 352
           EI  + +L  L+++ N L T+   +      ++LK  ++RL   +  EA    E+L    
Sbjct: 157 EISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRL--TQLPEAIGDCENLT--- 211

Query: 353 TRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLDLSRNSIQELPPELSSCASLQV 407
                   EL L    L  +P+ I +  ++  L+  RN +  LP E+  C SL V
Sbjct: 212 --------ELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTV 258



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 72/128 (56%)

Query: 45  VDLQKLILAHNNIEKLKEDLRNLPLLTVLNVSHNKLSELPAAIGELHMLKSLDVSFNSIM 104
           + L  L+++ N +E + + +  L  L++L +  N+L++LP AIG+   L  L ++ N ++
Sbjct: 162 ISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLL 221

Query: 105 KIPDEIGSATALVKFDCSSNQLKELPSSLGRCLNLSDFKASNNCITSLPEDLADCSKMSK 164
            +P  IG    L   +   N+L  LP  +G C +L+ F   +N +T +P +++   ++  
Sbjct: 222 TLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCIRDNRLTRIPSEVSQAMELHV 281

Query: 165 LDVEGNKL 172
           LDV GN+L
Sbjct: 282 LDVAGNRL 289



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 41/210 (19%)

Query: 208 RLIRLDLHQNRILSIPSSISGCCSLAEFYMGNNALSALPAELGKLSKLGTLDLHSNQLKE 267
           +L+ LD+ +N I  IP SIS C +L       N L+ LP    +L  L  L ++   L+ 
Sbjct: 2   QLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQS 61

Query: 268 YCVEACQL-RLSVLDLSNNSLSGLPPEIGKMTTLRKLLLTGNPLRTLRSSLVNGPTPALL 326
                  L  L+ L+L  N L+ LP  + ++  L +L L  N + +L  S+      ALL
Sbjct: 62  LPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESI-----GALL 116

Query: 327 KYLRSRLPENEDSEASTTKEDLITMATRLSVTSKELSLEGMNLSAIPSEIWEAGEITKLD 386
                                            K+L L+G  LS +P EI     +  LD
Sbjct: 117 HL-------------------------------KDLWLDGNQLSELPQEIGNLRNLLCLD 145

Query: 387 LSRNSIQELPPELSSCASLQVKFSDLVTNK 416
           +S N ++ LP E+S   SL    +DLV ++
Sbjct: 146 VSENRLERLPEEISGLISL----TDLVVSQ 171


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.314    0.130    0.368 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,260,560,669
Number of Sequences: 23463169
Number of extensions: 247418759
Number of successful extensions: 1029563
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8674
Number of HSP's successfully gapped in prelim test: 25587
Number of HSP's that attempted gapping in prelim test: 600981
Number of HSP's gapped (non-prelim): 170339
length of query: 429
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 284
effective length of database: 8,957,035,862
effective search space: 2543798184808
effective search space used: 2543798184808
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 78 (34.7 bits)