BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014202
(429 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 130/314 (41%), Positives = 187/314 (59%), Gaps = 20/314 (6%)
Query: 69 PAPTD-EKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSG 127
PA D E QL +F+ +EL+ A+ NF +ILG GGFG V+KG + G
Sbjct: 13 PAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG----------RLADG 62
Query: 128 ITVAVKSLKPDGLQG-HREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSL 186
VAVK LK + QG ++ EV+ + H NL++L G+C+ +RLLVY +M GS+
Sbjct: 63 TLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 122
Query: 187 ENHLFRR---TIPLPWSNRIKIALGAAKGLAFLHGGSEP-VIYRDFKTSNILLDSEYNAK 242
+ L R PL W R +IALG+A+GLA+LH +P +I+RD K +NILLD E+ A
Sbjct: 123 ASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 182
Query: 243 LSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRR 302
+ DFGLAK D HV V GT G+ APEY+ TG + K+DV+ +GV+LLE++TG+R
Sbjct: 183 VGDFGLAKLMDYKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 241
Query: 303 SMDKKRPSGEQN--LVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRD 360
+ D R + + + L+ W + L +K KL +VD L+ NY + V+++ Q+A C
Sbjct: 242 AFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 300
Query: 361 PKSRPSMDEVVKVL 374
P RP M EVV++L
Sbjct: 301 PMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/314 (41%), Positives = 186/314 (59%), Gaps = 20/314 (6%)
Query: 69 PAPTD-EKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSG 127
PA D E QL +F+ +EL+ A+ NF +ILG GGFG V+KG + G
Sbjct: 5 PAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG----------RLADG 54
Query: 128 ITVAVKSLKPDGLQG-HREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSL 186
VAVK LK + QG ++ EV+ + H NL++L G+C+ +RLLVY +M GS+
Sbjct: 55 XLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSV 114
Query: 187 ENHLFRR---TIPLPWSNRIKIALGAAKGLAFLHGGSEP-VIYRDFKTSNILLDSEYNAK 242
+ L R PL W R +IALG+A+GLA+LH +P +I+RD K +NILLD E+ A
Sbjct: 115 ASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174
Query: 243 LSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRR 302
+ DFGLAK D HV V G G+ APEY+ TG + K+DV+ +GV+LLE++TG+R
Sbjct: 175 VGDFGLAKLMDYKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 233
Query: 303 SMDKKRPSGEQN--LVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRD 360
+ D R + + + L+ W + L +K KL +VD L+ NY + V+++ Q+A C
Sbjct: 234 AFDLARLANDDDVMLLDWVKGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 292
Query: 361 PKSRPSMDEVVKVL 374
P RP M EVV++L
Sbjct: 293 PMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 173/298 (58%), Gaps = 16/298 (5%)
Query: 77 PCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK 136
P + + +L+ AT NF ++G G FG V+KG + + G VA+K
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRT 72
Query: 137 PDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP 196
P+ QG E+ E++ L HP+LV LIG+C E ++ +L+Y++M G+L+ HL+ +P
Sbjct: 73 PESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP 132
Query: 197 ---LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGP 253
+ W R++I +GAA+GL +LH + +I+RD K+ NILLD + K++DFG++K G
Sbjct: 133 TMSMSWEQRLEICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGT 190
Query: 254 QGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
+ D+TH+ V GT GY PEY + G LT KSDVYSFGVVL E+L R ++ + P
Sbjct: 191 ELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV 250
Query: 314 NLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
NL WA + + +L QIVDP L + ++K A CL+ + RPSM +V+
Sbjct: 251 NLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/298 (37%), Positives = 172/298 (57%), Gaps = 16/298 (5%)
Query: 77 PCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK 136
P + + +L+ AT NF ++G G FG V+KG + + G VA+K
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRT 72
Query: 137 PDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP 196
P+ QG E+ E++ L HP+LV LIG+C E ++ +L+Y++M G+L+ HL+ +P
Sbjct: 73 PESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP 132
Query: 197 ---LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGP 253
+ W R++I +GAA+GL +LH + +I+RD K+ NILLD + K++DFG++K G
Sbjct: 133 TMSMSWEQRLEICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGT 190
Query: 254 QGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
+ +TH+ V GT GY PEY + G LT KSDVYSFGVVL E+L R ++ + P
Sbjct: 191 ELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV 250
Query: 314 NLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
NL WA + + +L QIVDP L + ++K A CL+ + RPSM +V+
Sbjct: 251 NLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 175/312 (56%), Gaps = 21/312 (6%)
Query: 74 EKSPCQLLQFTFQELKSATGNF--RPDSI----LGEGGFGYVFKGWIEENGTAPAKPGSG 127
E S + F+F ELK+ T NF RP S+ +GEGGFG V+KG++ A K +
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAM 65
Query: 128 ITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLE 187
+ + + LK +++ E+ + + H NLV+L+G+ + D LVY +M GSL
Sbjct: 66 VDITTEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 188 NHL--FRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSD 245
+ L T PL W R KIA GAA G+ FLH I+RD K++NILLD + AK+SD
Sbjct: 119 DRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISD 176
Query: 246 FGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMD 305
FGLA+A + +T + +R+VGT Y APE + G +T KSD+YSFGVVLLEI+TG ++D
Sbjct: 177 FGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 306 KKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
+ R Q L+ + +++ + +D ++ + V+ + +A CL RP
Sbjct: 236 EHREP--QLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRP 292
Query: 366 SMDEVVKVLTPL 377
+ +V ++L +
Sbjct: 293 DIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 174/312 (55%), Gaps = 21/312 (6%)
Query: 74 EKSPCQLLQFTFQELKSATGNF--RPDSI----LGEGGFGYVFKGWIEENGTAPAKPGSG 127
E S + F+F ELK+ T NF RP S+ +GEGGFG V+KG++ A K +
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAM 65
Query: 128 ITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLE 187
+ + + LK +++ E+ + + H NLV+L+G+ + D LVY +M GSL
Sbjct: 66 VDITTEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 188 NHL--FRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSD 245
+ L T PL W R KIA GAA G+ FLH I+RD K++NILLD + AK+SD
Sbjct: 119 DRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISD 176
Query: 246 FGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMD 305
FGLA+A + +T + R+VGT Y APE + G +T KSD+YSFGVVLLEI+TG ++D
Sbjct: 177 FGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 306 KKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
+ R Q L+ + +++ + +D ++ + V+ + +A CL RP
Sbjct: 236 EHREP--QLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRP 292
Query: 366 SMDEVVKVLTPL 377
+ +V ++L +
Sbjct: 293 DIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 170/303 (56%), Gaps = 21/303 (6%)
Query: 83 FTFQELKSATGNF--RPDSI----LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK 136
F+F ELK+ T NF RP S+ +GEGGFG V+KG++ A K + + + + LK
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 137 PDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL--FRRT 194
+++ E+ + + H NLV+L+G+ + D LVY +M GSL + L T
Sbjct: 69 -------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 121
Query: 195 IPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQ 254
PL W R KIA GAA G+ FLH I+RD K++NILLD + AK+SDFGLA+A +
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEK 179
Query: 255 GDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQN 314
+ + R+VGT Y APE + G +T KSD+YSFGVVLLEI+TG ++D+ R Q
Sbjct: 180 FAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QL 236
Query: 315 LVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
L+ + +++ + +D ++ + V+ + +A CL RP + +V ++L
Sbjct: 237 LLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
Query: 375 TPL 377
+
Sbjct: 296 QEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 164/300 (54%), Gaps = 21/300 (7%)
Query: 83 FTFQELKSATGNF--RPDSI----LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK 136
F+F ELK+ T NF RP S+ GEGGFG V+KG++ A K + + + + LK
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 137 PDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL--FRRT 194
+++ E+ + H NLV+L+G+ + D LVY + GSL + L T
Sbjct: 66 -------QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT 118
Query: 195 IPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQ 254
PL W R KIA GAA G+ FLH I+RD K++NILLD + AK+SDFGLA+A +
Sbjct: 119 PPLSWHXRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 255 GDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQN 314
+ +R+VGT Y APE + G +T KSD+YSFGVVLLEI+TG ++D+ R Q
Sbjct: 177 FAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QL 233
Query: 315 LVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
L+ + +++ + +D + + V+ +A CL RP + +V ++L
Sbjct: 234 LLDIKEEIEDEEKTIEDYIDKKXN-DADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 132/282 (46%), Gaps = 35/282 (12%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHR--EWVAEVDFLGQLH 157
+G G FG V + W G VAVK L R E++ EV + +L
Sbjct: 45 IGAGSFGTVHRAEW------------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR 92
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI--PLPWSNRIKIALGAAKGLAF 215
HPN+V +G + +V E+++RGSL L + L R+ +A AKG+ +
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEY 275
LH + P+++RD K+ N+L+D +Y K+ DFGL++ + S GT + APE
Sbjct: 153 LHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEV 210
Query: 276 VMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDP 335
+ KSDVYSFGV+L E+ T ++ P+ V + +
Sbjct: 211 LRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK-------------- 256
Query: 336 RLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
RLE+ +L +V+ + C + +P RPS ++ +L PL
Sbjct: 257 RLEIPRNLN--PQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 142/283 (50%), Gaps = 15/283 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
LGEG FG V P G+G VAVK+LK D HR W E+D L L+H
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 160 NLVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
+++K G C + ++ LV E++ GSL ++L R +I L + + A +G+A+LH
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICEGMAYLH 134
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTH-VSTRVVGTYGYAAPEYV 276
S+ I+R+ N+LLD++ K+ DFGLAKA P+G + + V + APE +
Sbjct: 135 --SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 277 MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR 336
SDV+SFGV L E+LT S + P+ L+ A+ + R L ++++
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVLR-LTELLERG 250
Query: 337 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
L K +V L NC + RP+ + ++ +L + +
Sbjct: 251 ERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 142/284 (50%), Gaps = 17/284 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
LGEG FG V + P G+G VAVK+LK D HR W E+D L L+H
Sbjct: 39 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 160 NLVKLIGYCIEDD---QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFL 216
+++K G C ED LV E++ GSL ++L R +I L + + A +G+A+L
Sbjct: 94 HIIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICEGMAYL 150
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTH-VSTRVVGTYGYAAPEY 275
H ++ I+RD N+LLD++ K+ DFGLAKA P+G + + V + APE
Sbjct: 151 H--AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPEC 208
Query: 276 VMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDP 335
+ SDV+SFGV L E+LT S + P+ L+ A+ + R L ++++
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVLR-LTELLER 266
Query: 336 RLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
L K +V L NC + RP+ + ++ +L + +
Sbjct: 267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 35/282 (12%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHR--EWVAEVDFLGQLH 157
+G G FG V + W G VAVK L R E++ EV + +L
Sbjct: 45 IGAGSFGTVHRAEW------------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR 92
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI--PLPWSNRIKIALGAAKGLAF 215
HPN+V +G + +V E+++RGSL L + L R+ +A AKG+ +
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEY 275
LH + P+++R+ K+ N+L+D +Y K+ DFGL++ + S GT + APE
Sbjct: 153 LHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEV 210
Query: 276 VMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDP 335
+ KSDVYSFGV+L E+ T ++ P+ V + +
Sbjct: 211 LRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK-------------- 256
Query: 336 RLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
RLE+ +L +V+ + C + +P RPS ++ +L PL
Sbjct: 257 RLEIPRNLN--PQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 142/283 (50%), Gaps = 15/283 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
LGEG FG V P G+G VAVK+LK D HR W E+D L L+H
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 160 NLVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
+++K G C + ++ LV E++ GSL ++L R +I L + + A +G+A+LH
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICEGMAYLH 134
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTH-VSTRVVGTYGYAAPEYV 276
++ I+R+ N+LLD++ K+ DFGLAKA P+G + + V + APE +
Sbjct: 135 --AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 277 MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR 336
SDV+SFGV L E+LT S + P+ L+ A+ + R L ++++
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVLR-LTELLERG 250
Query: 337 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
L K +V L NC + RP+ + ++ +L + +
Sbjct: 251 ERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 44/291 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-------KPDGLQGHREWVAEVDFL 153
+G+GGFG V KG + ++ + VA+KSL + + ++ +E+ EV +
Sbjct: 27 IGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
L+HPN+VKL Y + + +V EF+ G L + L + P+ WS ++++ L A G+
Sbjct: 78 SNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 214 AFLHGGSEPVIYRDFKTSNILLDS-----EYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
++ + P+++RD ++ NI L S AK++DFGL++ H + ++G +
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNF 190
Query: 269 GYAAPEYVMTGH--LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADK 326
+ APE + T K+D YSF ++L ILTG D+ G+ + R+ +
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMIREE-GLR 248
Query: 327 RKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
+ + PRL + V +L C S DPK RP +VK L+ L
Sbjct: 249 PTIPEDCPPRL---------RNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 143/291 (49%), Gaps = 44/291 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-------KPDGLQGHREWVAEVDFL 153
+G+GGFG V KG + ++ + VA+KSL + + ++ +E+ EV +
Sbjct: 27 IGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
L+HPN+VKL Y + + +V EF+ G L + L + P+ WS ++++ L A G+
Sbjct: 78 SNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 214 AFLHGGSEPVIYRDFKTSNILLDS-----EYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
++ + P+++RD ++ NI L S AK++DF L++ H + ++G +
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNF 190
Query: 269 GYAAPEYVMTGH--LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADK 326
+ APE + T K+D YSF ++L ILTG D+ G+ + R+ +
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMIREE-GLR 248
Query: 327 RKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
+ + PRL + V +L C S DPK RP +VK L+ L
Sbjct: 249 PTIPEDCPPRL---------RNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 143/291 (49%), Gaps = 44/291 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-------KPDGLQGHREWVAEVDFL 153
+G+GGFG V KG + ++ + VA+KSL + + ++ +E+ EV +
Sbjct: 27 IGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
L+HPN+VKL Y + + +V EF+ G L + L + P+ WS ++++ L A G+
Sbjct: 78 SNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGI 135
Query: 214 AFLHGGSEPVIYRDFKTSNILLDS-----EYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
++ + P+++RD ++ NI L S AK++DFG ++ H + ++G +
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNF 190
Query: 269 GYAAPEYVMTGH--LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADK 326
+ APE + T K+D YSF ++L ILTG D+ G+ + R+ +
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMIREE-GLR 248
Query: 327 RKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
+ + PRL + V +L C S DPK RP +VK L+ L
Sbjct: 249 PTIPEDCPPRL---------RNVIEL---CWSGDPKKRPHFSYIVKELSEL 287
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 145/309 (46%), Gaps = 28/309 (9%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTFEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 190 LFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA 249
L + + + G A G+ +L ++RD NIL++S K+SDFGLA
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLA 194
Query: 250 KAGPQGDKTHVSTRVVGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKR 308
+ + +TR + +PE + TS SDV+S+G+VL E+++ +R
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GER 249
Query: 309 PSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
P E + + + + VD L + + QL +C +D +RP +
Sbjct: 250 PYWEMS-----------NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 369 EVVKVLTPL 377
++V +L L
Sbjct: 299 QIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 145/309 (46%), Gaps = 28/309 (9%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 23 PHTYEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 74
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 75 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 134
Query: 190 LFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA 249
L + + + G A G+ +L ++RD NIL++S K+SDFGL+
Sbjct: 135 LRKHDAQFTVIQLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLS 192
Query: 250 KAGPQGDKTHVSTRVVGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKR 308
+ + +TR + +PE + TS SDV+S+G+VL E+++ +R
Sbjct: 193 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GER 247
Query: 309 PSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
P E + + + + VD L + + QL +C +D +RP +
Sbjct: 248 PYWEMS-----------NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 296
Query: 369 EVVKVLTPL 377
++V +L L
Sbjct: 297 QIVSILDKL 305
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 145/309 (46%), Gaps = 28/309 (9%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTYEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 190 LFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA 249
L + + + G A G+ +L ++RD NIL++S K+SDFGL+
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 250 KAGPQGDKTHVSTRVVGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKR 308
+ + +TR + +PE + TS SDV+S+G+VL E+++ +R
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GER 249
Query: 309 PSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
P E + + + + VD L + + QL +C +D +RP +
Sbjct: 250 PYWEMS-----------NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 369 EVVKVLTPL 377
++V +L L
Sbjct: 299 QIVSILDKL 307
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 145/309 (46%), Gaps = 28/309 (9%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTFEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 190 LFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA 249
L + + + G A G+ +L ++RD NIL++S K+SDFGL+
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYL--SDMGFVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 250 KAGPQGDKTHVSTRVVGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKR 308
+ + +TR + +PE + TS SDV+S+G+VL E+++ +R
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GER 249
Query: 309 PSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
P E + + + + VD L + + QL +C +D +RP +
Sbjct: 250 PYWEMS-----------NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 369 EVVKVLTPL 377
++V +L L
Sbjct: 299 QIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 145/309 (46%), Gaps = 28/309 (9%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTYEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 190 LFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA 249
L + + + G A G+ +L ++RD NIL++S K+SDFGL+
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 250 KAGPQGDKTHVSTRVVGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKR 308
+ + +TR + +PE + TS SDV+S+G+VL E+++ +R
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GER 249
Query: 309 PSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
P E + + + + VD L + + QL +C +D +RP +
Sbjct: 250 PYWEMS-----------NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 369 EVVKVLTPL 377
++V +L L
Sbjct: 299 QIVSILDKL 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 145/309 (46%), Gaps = 28/309 (9%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTFEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 190 LFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA 249
L + + + G A G+ +L ++RD NIL++S K+SDFGL+
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 250 KAGPQGDKTHVSTRVVGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKR 308
+ + +TR + +PE + TS SDV+S+G+VL E+++ +R
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GER 249
Query: 309 PSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
P E + + + + VD L + + QL +C +D +RP +
Sbjct: 250 PYWEMS-----------NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 369 EVVKVLTPL 377
++V +L L
Sbjct: 299 QIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 145/309 (46%), Gaps = 28/309 (9%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTFEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 190 LFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA 249
L + + + G A G+ +L ++RD NIL++S K+SDFGL+
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 250 KAGPQGDKTHVSTRVVGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKR 308
+ + +TR + +PE + TS SDV+S+G+VL E+++ +R
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GER 249
Query: 309 PSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
P E + + + + VD L + + QL +C +D +RP +
Sbjct: 250 PYWEMS-----------NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 369 EVVKVLTPL 377
++V +L L
Sbjct: 299 QIVSILDKL 307
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 144/309 (46%), Gaps = 28/309 (9%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTFEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E+M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 190 LFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA 249
L + + + G A G+ +L ++RD NIL++S K+SDFGL
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLG 194
Query: 250 KAGPQGDKTHVSTRVVGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKR 308
+ + +TR + +PE + TS SDV+S+G+VL E+++ +R
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GER 249
Query: 309 PSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
P E + + + + VD L + + QL +C +D +RP +
Sbjct: 250 PYWEMS-----------NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 369 EVVKVLTPL 377
++V +L L
Sbjct: 299 QIVSILDKL 307
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 144/309 (46%), Gaps = 28/309 (9%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTFEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSF 136
Query: 190 LFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA 249
L + + + G A G+ +L ++RD NIL++S K+SDFGL+
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYL--SDMGAVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 250 KAGPQGDKTHVSTRVVGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKR 308
+ + +TR + +PE + TS SDV+S+G+VL E+++ +R
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GER 249
Query: 309 PSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
P E + + + + VD L + + QL +C +D +RP +
Sbjct: 250 PYWEMS-----------NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 369 EVVKVLTPL 377
++V +L L
Sbjct: 299 QIVSILDKL 307
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 108/205 (52%), Gaps = 15/205 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLHHP 159
LGEG FG V E P +G VAVKSLKP+ H + E++ L L+H
Sbjct: 29 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 160 NLVKLIGYCIED--DQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
N+VK G C ED + L+ EF+ GSL+ +L + + ++K A+ KG+ +L
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL- 142
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST---RVVGTYGYAAPE 274
GS ++RD N+L++SE+ K+ DFGL KA + DK + R + Y APE
Sbjct: 143 -GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA-IETDKEXXTVKDDRDSPVFWY-APE 199
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILT 299
+M SDV+SFGV L E+LT
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 144/309 (46%), Gaps = 28/309 (9%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +EL + N D ++G G FG V G ++ P+K I+V
Sbjct: 25 PHTYEDPTQTVHEFAKELDAT--NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISV 76
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+++L G + ++V E M GSL++
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSF 136
Query: 190 LFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA 249
L + + + G A G+ +L ++RD NIL++S K+SDFGL+
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYL--SDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Query: 250 KAGPQGDKTHVSTRVVGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKR 308
+ + +TR + +PE + TS SDV+S+G+VL E+++ +R
Sbjct: 195 RVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GER 249
Query: 309 PSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
P E + + + + VD L + + QL +C +D +RP +
Sbjct: 250 PYWEMS-----------NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFE 298
Query: 369 EVVKVLTPL 377
++V +L L
Sbjct: 299 QIVSILDKL 307
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 108/205 (52%), Gaps = 15/205 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLHHP 159
LGEG FG V E P +G VAVKSLKP+ H + E++ L L+H
Sbjct: 17 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 160 NLVKLIGYCIED--DQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
N+VK G C ED + L+ EF+ GSL+ +L + + ++K A+ KG+ +L
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL- 130
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST---RVVGTYGYAAPE 274
GS ++RD N+L++SE+ K+ DFGL KA + DK + R + Y APE
Sbjct: 131 -GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA-IETDKEXXTVKDDRDSPVFWY-APE 187
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILT 299
+M SDV+SFGV L E+LT
Sbjct: 188 CLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 136/286 (47%), Gaps = 26/286 (9%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDF 152
N D ++G G FG V G ++ P+K I+VA+K+LK + R +++ E
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKG 212
+GQ HPN+++L G + ++V E+M GSL++ L + + + G A G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 213 LAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT-YGYA 271
+ +L ++RD NIL++S K+SDFGL++ + +TR +
Sbjct: 131 MKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQ 331
+PE + TS SDV+S+G+VL E+++ +RP E + + + +
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS-----------NQDVIK 232
Query: 332 IVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
VD L + + QL +C +D +RP +++V +L L
Sbjct: 233 AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 144/286 (50%), Gaps = 43/286 (15%)
Query: 98 DSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V K W ++ VA+K ++ + + + ++ E+ L ++
Sbjct: 14 EEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELRQLSRV 59
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPW---SNRIKIALGAAKGL 213
+HPN+VKL G C+ + LV E+ GSL N + PLP+ ++ + L ++G+
Sbjct: 60 NHPNIVKLYGACL--NPVCLVMEYAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 214 AFLHGGS-EPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
A+LH + +I+RD K N+LL + K+ DFG A +TH+ T G+ +
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWM 171
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQ 331
APE + + K DV+S+G++L E++T R+ D+ G + WA ++
Sbjct: 172 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWA---------VHN 220
Query: 332 IVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
P L N + + L C S+DP RPSM+E+VK++T L
Sbjct: 221 GTRPPLIKNLP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 142/316 (44%), Gaps = 63/316 (19%)
Query: 80 LLQFTFQELKSATGNFRPDSILGEGGFGYVFKG-WIEENGTAPAK---PGSGITVAVKSL 135
LL+ F EL + I+G GGFG V++ WI + A P I+ ++++
Sbjct: 1 LLEIDFAELTL-------EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENV 53
Query: 136 KPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI 195
+ E L HPN++ L G C+++ LV EF G L L + I
Sbjct: 54 R-----------QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRI 102
Query: 196 PLPWSNRIKIALGAAKGLAFLHGGS-EPVIYRDFKTSNILLDSEYN--------AKLSDF 246
P + A+ A+G+ +LH + P+I+RD K+SNIL+ + K++DF
Sbjct: 103 PP--DILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160
Query: 247 GLAKAGPQGDKTHVSTRV--VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGR--- 301
GLA+ + H +T++ G Y + APE + + SDV+S+GV+L E+LTG
Sbjct: 161 GLAR------EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
Query: 302 RSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDP 361
R +D + Y + +L L + ++L +C + DP
Sbjct: 215 RGIDGLAVA-------------------YGVAMNKLALPIPSTCPEPFAKLMEDCWNPDP 255
Query: 362 KSRPSMDEVVKVLTPL 377
SRPS ++ LT +
Sbjct: 256 HSRPSFTNILDQLTTI 271
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 136/286 (47%), Gaps = 26/286 (9%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDF 152
N D ++G G FG V G ++ P+K I+VA+K+LK + R +++ E
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFLGEASI 87
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKG 212
+GQ HPN+++L G + ++V E+M GSL++ L + + + G A G
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 147
Query: 213 LAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT-YGYA 271
+ +L ++RD NIL++S K+SDFGL++ + +TR +
Sbjct: 148 MKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQ 331
+PE + TS SDV+S+G+VL E+++ +RP E + + + +
Sbjct: 206 SPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS-----------NQDVIK 249
Query: 332 IVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
VD L + + QL +C +D +RP +++V +L L
Sbjct: 250 AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 144/287 (50%), Gaps = 43/287 (14%)
Query: 98 DSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V K W ++ VA+K ++ + + + ++ E+ L ++
Sbjct: 13 EEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELRQLSRV 58
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPW---SNRIKIALGAAKGL 213
+HPN+VKL G C+ + LV E+ GSL N + PLP+ ++ + L ++G+
Sbjct: 59 NHPNIVKLYGACL--NPVCLVMEYAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 214 AFLHGGS-EPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
A+LH + +I+RD K N+LL + K+ DFG A +TH+ T G+ +
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWM 170
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQ 331
APE + + K DV+S+G++L E++T R+ D+ G + WA ++
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWA---------VHN 219
Query: 332 IVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQ 378
P L N + + L C S+DP RPSM+E+VK++T L
Sbjct: 220 GTRPPLIKNLP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 135/286 (47%), Gaps = 26/286 (9%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDF 152
N D ++G G FG V G ++ P+K I+VA+K+LK + R +++ E
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKG 212
+GQ HPN+++L G + ++V E M GSL++ L + + + G A G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 213 LAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT-YGYA 271
+ +L ++RD NIL++S K+SDFGL++ + +TR +
Sbjct: 131 MKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQ 331
+PE + TS SDV+S+G+VL E+++ +RP E + + + +
Sbjct: 189 SPEAIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS-----------NQDVIK 232
Query: 332 IVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
VD L + + QL +C +D +RP +++V +L L
Sbjct: 233 AVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 133/293 (45%), Gaps = 39/293 (13%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LGEG FG VF E +P K + VAVK+LK L +++ E + L L H +
Sbjct: 23 LGEGAFGKVFLA--ECYNLSPTK--DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP----------------LPWSNRIK 204
+VK G C + D ++V+E+M G L N R P L S +
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
IA A G+ +L S+ ++RD T N L+ + K+ DFG+++ D V
Sbjct: 138 IASQIASGMVYL--ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 324
+ + PE +M T++SDV+SFGV+L EI T G+Q W + L+
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT----------YGKQ---PWFQ--LS 240
Query: 325 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
+ + I R+ L ++V + C R+P+ R ++ E+ K+L L
Sbjct: 241 NTEVIECITQGRV-LERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 130/278 (46%), Gaps = 32/278 (11%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V G W+ ++ VA+K+++ +G +++ E + + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L G C+E LV+EFM G L ++L + + + L +G+A+L
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
S VI+RD N L+ K+SDFG+ + D+ ST +A+PE
Sbjct: 123 S--VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 280 HLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLEL 339
+SKSDV+SFGV++ E+ + + + R + E + D +++ PRL
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLAS 230
Query: 340 NYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
+ V Q+ +C P+ RP+ +++ L +
Sbjct: 231 TH-------VYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 128/290 (44%), Gaps = 36/290 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LGEG FG VF E P + I VAVK+LK +++ E + L L H +
Sbjct: 21 LGEGAFGKVFLA--ECYNLCPEQ--DKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP-------------LPWSNRIKIAL 207
+VK G C+E D ++V+E+M G L N R P L S + IA
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDL-NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A G+ +L S+ ++RD T N L+ K+ DFG+++ D V +
Sbjct: 136 QIAAGMVYL--ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
+ PE +M T++SDV+S GVVL EI T G+Q W + L++
Sbjct: 194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFT----------YGKQ---PWYQ--LSNNE 238
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
+ I R+ L Q+V +L C R+P R ++ + +L L
Sbjct: 239 VIECITQGRV-LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 32/280 (11%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V G W+ ++ VA+K+++ +G +++ E + + +L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L G C+E LV+EFM G L ++L + + + L +G+A+L
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
VI+RD N L+ K+SDFG+ + D+ ST +A+PE
Sbjct: 123 C--VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 280 HLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLEL 339
+SKSDV+SFGV++ E+ + + + R + E + D +++ PRL
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLAS 230
Query: 340 NYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
+ V Q+ +C P+ RP+ +++ L + +
Sbjct: 231 TH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 263
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 32/280 (11%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V G W+ ++ VA+K+++ +G +++ E + + +L HP
Sbjct: 13 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 60
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L G C+E LV+EFM G L ++L + + + L +G+A+L
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
VI+RD N L+ K+SDFG+ + D+ ST +A+PE
Sbjct: 121 C--VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 280 HLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLEL 339
+SKSDV+SFGV++ E+ + + + R + E + D +++ PRL
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLAS 228
Query: 340 NYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
+ V Q+ +C P+ RP+ +++ L + +
Sbjct: 229 TH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 32/280 (11%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V G W+ ++ VA+K+++ +G +++ E + + +L HP
Sbjct: 18 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 65
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L G C+E LV+EFM G L ++L + + + L +G+A+L
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
VI+RD N L+ K+SDFG+ + D+ ST +A+PE
Sbjct: 126 C--VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFS 182
Query: 280 HLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLEL 339
+SKSDV+SFGV++ E+ + + + R + E + D +++ PRL
Sbjct: 183 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLAS 233
Query: 340 NYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
+ V Q+ +C P+ RP+ +++ L + +
Sbjct: 234 TH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 32/280 (11%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V G W+ ++ VA+K++K +G +++ E + + +L HP
Sbjct: 35 IGSGQFGLVHLGYWLNKD-----------KVAIKTIK-EGSMSEDDFIEEAEVMMKLSHP 82
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L G C+E LV+EFM G L ++L + + + L +G+A+L
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
VI+RD N L+ K+SDFG+ + D+ ST +A+PE
Sbjct: 143 C--VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFS 199
Query: 280 HLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLEL 339
+SKSDV+SFGV++ E+ + + + R + E + D +++ PRL
Sbjct: 200 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLAS 250
Query: 340 NYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
+ V Q+ +C P+ RP+ +++ L + +
Sbjct: 251 TH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 283
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 15/283 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD-GLQGHREWVAEVDFLGQLHHP 159
LGEG FG V + P G+G VAVK+LK G Q W E++ L L+H
Sbjct: 17 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 160 NLVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
++VK G C + ++ LV E++ GSL ++L R + L + + A +G+A+LH
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGMAYLH 129
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTH-VSTRVVGTYGYAAPEYV 276
++ I+R N+LLD++ K+ DFGLAKA P+G + + V + APE +
Sbjct: 130 --AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 187
Query: 277 MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR 336
SDV+SFGV L E+LT S + P + + Q +L ++++
Sbjct: 188 KECKFYYASDVWSFGVTLYELLTYCDS--NQSPHTKFTELIGHTQGQMTVLRLTELLERG 245
Query: 337 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
L + ++ L NC + RP+ +V +L Q+
Sbjct: 246 ERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQE 288
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 15/283 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD-GLQGHREWVAEVDFLGQLHHP 159
LGEG FG V + P G+G VAVK+LK G Q W E++ L L+H
Sbjct: 16 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 160 NLVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
++VK G C + ++ LV E++ GSL ++L R + L + + A +G+A+LH
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGMAYLH 128
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTH-VSTRVVGTYGYAAPEYV 276
++ I+R N+LLD++ K+ DFGLAKA P+G + + V + APE +
Sbjct: 129 --AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 186
Query: 277 MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR 336
SDV+SFGV L E+LT S + P + + Q +L ++++
Sbjct: 187 KECKFYYASDVWSFGVTLYELLTYCDS--NQSPHTKFTELIGHTQGQMTVLRLTELLERG 244
Query: 337 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
L + ++ L NC + RP+ +V +L Q+
Sbjct: 245 ERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQE 287
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ EF+ GSL +L + + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+RD T NIL+++E K+ DFGL K PQ DK + G + APE +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESL 192
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 32/280 (11%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V G W+ ++ VA+K+++ +G +++ E + + +L HP
Sbjct: 16 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 63
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L G C+E LV EFM G L ++L + + + L +G+A+L
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
VI+RD N L+ K+SDFG+ + D+ ST +A+PE
Sbjct: 124 C--VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFS 180
Query: 280 HLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLEL 339
+SKSDV+SFGV++ E+ + + + R + E + D +++ PRL
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLAS 231
Query: 340 NYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
+ V Q+ +C P+ RP+ +++ L + +
Sbjct: 232 TH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 17 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ E++ GSL ++L + + ++ KG+ +L
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 129
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+RD T NIL+++E K+ DFGL K PQ DK + G + APE +
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESL 188
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 189 TESKFSVASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ E++ GSL ++L + + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+RD T NIL+++E K+ DFGL K PQ DK + G + APE +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESL 189
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ E++ GSL ++L + + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+RD T NIL+++E K+ DFGL K PQ DK + G + APE +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEFFKVKEPGESPIFWYAPESL 189
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 16 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ E++ GSL ++L + + ++ KG+ +L
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 128
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+RD T NIL+++E K+ DFGL K PQ DK + G + APE +
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESL 187
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 188 TESKFSVASDVWSFGVVLYELFT 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ E++ GSL ++L + + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+RD T NIL+++E K+ DFGL K PQ DK + G + APE +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESL 192
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 23 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ E++ GSL ++L + + ++ KG+ +L
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 135
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+RD T NIL+++E K+ DFGL K PQ DK + G + APE +
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESL 194
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 195 TESKFSVASDVWSFGVVLYELFT 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ E++ GSL ++L + + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+RD T NIL+++E K+ DFGL K PQ DK + G + APE +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESL 189
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 24 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ E++ GSL ++L + + ++ KG+ +L
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 136
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+RD T NIL+++E K+ DFGL K PQ DK + G + APE +
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESL 195
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 196 TESKFSVASDVWSFGVVLYELFT 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 22 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ E++ GSL ++L + + ++ KG+ +L
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 134
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+RD T NIL+++E K+ DFGL K PQ DK + G + APE +
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESL 193
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 194 TESKFSVASDVWSFGVVLYELFT 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 25 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ E++ GSL ++L + + ++ KG+ +L
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 137
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+RD T NIL+++E K+ DFGL K PQ DK + G + APE +
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESL 196
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 197 TESKFSVASDVWSFGVVLYELFT 219
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 125/270 (46%), Gaps = 27/270 (10%)
Query: 34 TSLVYDAATETRYLNASNRELCAPNEAHLSSDNPDPAPTDEKSPCQLLQFTFQELKSATG 93
TSL A +E Y +N LS+ NP+ Q +Q S
Sbjct: 45 TSLYKKAGSENLYFQGANTV-----HIDLSALNPELV--------QAVQHVVIGPSSLIV 91
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDF 152
+F + ++G G FG V+ G + +N G I AVKSL + + +++ E
Sbjct: 92 HF--NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGII 143
Query: 153 LGQLHHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ HPN++ L+G C+ + L+V +M G L N + T + I L AK
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 203
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK--AGPQGDKTHVSTRVVGTYG 269
G+ FL S+ ++RD N +LD ++ K++DFGLA+ + D H T
Sbjct: 204 GMKFL--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 270 YAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ A E + T T+KSDV+SFGV+L E++T
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 49 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ E++ GSL ++L + + ++ KG+ +L
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 161
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+RD T NIL+++E K+ DFGL K PQ DK + G + APE +
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESL 220
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 221 TESKFSVASDVWSFGVVLYELFT 243
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 36 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ E++ GSL ++L + + ++ KG+ +L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 148
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+RD T NIL+++E K+ DFGL K PQ DK + G + APE +
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESL 207
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 36 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ E++ GSL ++L + + ++ KG+ +L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 148
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+RD T NIL+++E K+ DFGL K PQ DK + G + APE +
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESL 207
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 107/229 (46%), Gaps = 31/229 (13%)
Query: 95 FRPD-----SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAE 149
FRP +LG+G FG K E G + +K L + R ++ E
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEV---------MVMKELIRFDEETQRTFLKE 57
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGA 209
V + L HPN++K IG +D + + E++ G+L + PWS R+ A
Sbjct: 58 VKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDI 117
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA------KAGPQG-------D 256
A G+A+LH S +I+RD + N L+ N ++DFGLA K P+G D
Sbjct: 118 ASGMAYLH--SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPD 175
Query: 257 KTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMD 305
+ T VVG + APE + K DV+SFG+VL EI+ GR + D
Sbjct: 176 RKKRYT-VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 104/203 (51%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 19 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ E++ GSL ++L + + ++ KG+ +L
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 131
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+R+ T NIL+++E K+ DFGL K PQ DK + + G + APE +
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ-DKEYYKVKEPGESPIFWYAPESL 190
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 191 TESKFSVASDVWSFGVVLYELFT 213
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 140/309 (45%), Gaps = 28/309 (9%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P Q + +E++++ + ++G G FG V G ++ G + V
Sbjct: 2 PHTYEDPNQAVHEFAKEIEASCITI--ERVIGAGEFGEVCSGRLKLPGK------RELPV 53
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN++ L G + ++V E+M GSL+
Sbjct: 54 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTF 113
Query: 190 LFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA 249
L + + + G + G+ +L ++RD NIL++S K+SDFGL+
Sbjct: 114 LKKNDGQFTVIQLVGMLRGISAGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLS 171
Query: 250 KAGPQGDKTHVSTRVVGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKR 308
+ + +TR + APE + TS SDV+S+G+V+ E+++ +R
Sbjct: 172 RVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSY-----GER 226
Query: 309 PSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
P E + + + V+ L + + QL +C ++ SRP D
Sbjct: 227 PYWEMT-----------NQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFD 275
Query: 369 EVVKVLTPL 377
E+V +L L
Sbjct: 276 EIVNMLDKL 284
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 12/203 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V E P + +G VAVK L+ + R++ E++ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 161 LVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
+VK G C +R L+ E++ GSL ++L + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL-- 133
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPEYV 276
G++ I+RD T NIL+++E K+ DFGL K PQ DK + G + APE +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESL 192
Query: 277 MTGHLTSKSDVYSFGVVLLEILT 299
+ SDV+SFGVVL E+ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ F
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 149
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK--AGPQGDKTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + D H T + A
Sbjct: 150 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL 207
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ F
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 146
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK--AGPQGDKTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + D H T + A
Sbjct: 147 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 204
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ F
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 148
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK--AGPQGDKTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + D H T + A
Sbjct: 149 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 36 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 89
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ F
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 149
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK--AGPQGDKTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + D H T + A
Sbjct: 150 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 207
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 133/305 (43%), Gaps = 37/305 (12%)
Query: 83 FTFQELKSATGNF---------RPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVK 133
FTF++ A F + + ++G G FG V G ++ G I VA+K
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGK------REIFVAIK 67
Query: 134 SLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR 192
+LK + R ++++E +GQ HPN++ L G + +++ EFM GSL++ L +
Sbjct: 68 TLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ 127
Query: 193 RTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAG 252
+ + G A G+ +L ++RD NIL++S K+SDFGL++
Sbjct: 128 NDGQFTVIQLVGMLRGIAAGMKYL--ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 185
Query: 253 PQGDKTHVSTRVVG---TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRP 309
T +G + APE + TS SDV+S+G+V+ E+++ +RP
Sbjct: 186 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY-----GERP 240
Query: 310 SGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDE 369
+ + + ++ L + + QL +C +D RP +
Sbjct: 241 YWDMT-----------NQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQ 289
Query: 370 VVKVL 374
+V L
Sbjct: 290 IVNTL 294
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 40 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 93
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ F
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 153
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK--AGPQGDKTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + D H T + A
Sbjct: 154 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 211
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 212 ESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ F
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKF 148
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK--AGPQGDKTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + D H T + A
Sbjct: 149 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 130/282 (46%), Gaps = 29/282 (10%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHH 158
++G G FG V+KG ++ + P VA+K+LK + R +++ E +GQ H
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVP-----VAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 105
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
N+++L G + +++ E+M G+L+ L + + + G A G+ +L
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL-- 163
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA---GPQGDKTHVSTRVVGTYGYAAPEY 275
+ ++RD NIL++S K+SDFGL++ P+ T ++ + APE
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PIRWTAPEA 221
Query: 276 VMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDP 335
+ TS SDV+SFG+V+ E++T +RP E + ++ + ++
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMT-----YGERPYWELS-----------NHEVMKAIND 265
Query: 336 RLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
L + + QL C ++ RP ++V +L L
Sbjct: 266 GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A+G+ +L S+ I+RD N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A+G+ +L S+ I+RD N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 131/281 (46%), Gaps = 28/281 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQL 156
+ ++G G FG V +G ++ AP K S VA+K+LK + R E+++E +GQ
Sbjct: 21 EEVIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFL 216
HPN+++L G +++ EFM G+L++ L + + G A G+ +L
Sbjct: 75 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 134
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG---TYGYAAP 273
S ++RD NIL++S K+SDFGL++ + T +G + AP
Sbjct: 135 AEMS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + TS SD +S+G+V+ E+++ GE+ + Q + + + +
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMS----------FGERPYWDMSNQDVINAIEQDYRL 242
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
P + SL QL +C +D +RP +VV L
Sbjct: 243 PPPPDCPTSLH------QLMLDCWQKDRNARPRFPQVVSAL 277
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 131/285 (45%), Gaps = 36/285 (12%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQL 156
+ ++G G FG V +G ++ AP K S VA+K+LK + R E+++E +GQ
Sbjct: 19 EEVIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFL 216
HPN+++L G +++ EFM G+L++ L + + G A G+ +L
Sbjct: 73 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 132
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG---TYGYAAP 273
S ++RD NIL++S K+SDFGL++ + T +G + AP
Sbjct: 133 AEMS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + TS SD +S+G+V+ E+++ +RP + + Q V
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMSF-----GERPYWDMS---------------NQDV 230
Query: 334 DPRLELNYSL----KGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+E +Y L + QL +C +D +RP +VV L
Sbjct: 231 INAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL 275
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A+G+ +L S+ I+RD N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 89 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P + + + +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A+G+ +L S+ I+RD N+L+ K++DFGLA+ D +T
Sbjct: 207 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV++ EI T
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A+G+ +L S+ I+RD N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P + + + +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A+G+ +L S+ I+RD N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P + + + +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A+G+ +L S+ I+RD N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 30 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P + + + +
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A+G+ +L S+ I+RD N+L+ K++DFGLA+ D +T
Sbjct: 148 SCTYQLARGMEYL--ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV++ EI T
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 19 LGGGQFGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV+L+G C + ++ EFMT G+L ++L R S + + + A +
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+ I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 281 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 340
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDPSQVYELLEKDYRME 230
Query: 341 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+KV +L C +P RPS E+
Sbjct: 231 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 35 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P + + + +
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A+G+ +L S+ I+RD N+L+ K++DFGLA+ D +T
Sbjct: 153 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV++ EI T
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 32 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P + + + +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A+G+ +L S+ I+RD N+L+ K++DFGLA+ D +T
Sbjct: 150 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV++ EI T
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 123/284 (43%), Gaps = 36/284 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LGEG FG VF E + P + + VAVK+LK +++ E + L L H +
Sbjct: 26 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI--------------PLPWSNRIKIA 206
+V+ G C E L+V+E+M G L L PL + +A
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG 266
A G+ +L G ++RD T N L+ K+ DFG+++ D V R +
Sbjct: 142 SQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 267 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADK 326
+ PE ++ T++SDV+SFGVVL EI T G+Q W + L++
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT----------YGKQ---PWYQ--LSNT 244
Query: 327 RKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ I R EL +V + C R+P+ R S+ +V
Sbjct: 245 EAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 287
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 123/284 (43%), Gaps = 36/284 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LGEG FG VF E + P + + VAVK+LK +++ E + L L H +
Sbjct: 20 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI--------------PLPWSNRIKIA 206
+V+ G C E L+V+E+M G L L PL + +A
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG 266
A G+ +L G ++RD T N L+ K+ DFG+++ D V R +
Sbjct: 136 SQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 267 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADK 326
+ PE ++ T++SDV+SFGVVL EI T G+Q W + L++
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT----------YGKQ---PWYQ--LSNT 238
Query: 327 RKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ I R EL +V + C R+P+ R S+ +V
Sbjct: 239 EAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 281
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A+G+ +L S+ I+RD N+L+ +++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEVDFLGQLH 157
LG+G FG V +G AP+ G ++VAVK LKPD L + +++ EV+ + L
Sbjct: 20 LGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
H NL++L G + ++ V E GSL + L + + A+ A+G+ +L
Sbjct: 74 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV--STRVVGTYGYAAPEY 275
S+ I+RD N+LL + K+ DFGL +A PQ D +V R V + + APE
Sbjct: 133 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPES 189
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ T + SD + FGV L E+ T
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V+KG W +G K + V + P LQ + EV L + H
Sbjct: 20 IGSGSFGTVYKGKW---HGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHV 68
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
N++ +GY + Q +V ++ SL +HL I IA A+G+ +LH
Sbjct: 69 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 127
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM-- 277
S +I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 128 S--IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 278 -TGHLTSKSDVYSFGVVLLEILTGR 301
+ + +SDVY+FG+VL E++TG+
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 140/310 (45%), Gaps = 30/310 (9%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P + P + + +EL ++ + + ++G G FG V G ++ G + V
Sbjct: 23 PETYEDPNRAVHQFAKELDASC--IKIERVIGAGEFGEVCSGRLKLPGK------RDVAV 74
Query: 131 AVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENH 189
A+K+LK + R +++ E +GQ HPN+V L G ++V EFM G+L+
Sbjct: 75 AIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAF 134
Query: 190 LFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA 249
L + + + G A G+ +L ++RD NIL++S K+SDFGL+
Sbjct: 135 LRKHDGQFTVIQLVGMLRGIAAGMRYL--ADMGYVHRDLAARNILVNSNLVCKVSDFGLS 192
Query: 250 KAGPQGDKTHVSTRVVGTYG--YAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKK 307
+ + D V T G + APE + TS SDV+S+G+V+ E+++ +
Sbjct: 193 RV-IEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY-----GE 246
Query: 308 RPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSM 367
RP + + + + + ++ L + + QL +C ++ RP
Sbjct: 247 RPYWDMS-----------NQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKF 295
Query: 368 DEVVKVLTPL 377
+++V +L +
Sbjct: 296 EQIVGILDKM 305
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 123/284 (43%), Gaps = 36/284 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LGEG FG VF E + P + + VAVK+LK +++ E + L L H +
Sbjct: 49 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI--------------PLPWSNRIKIA 206
+V+ G C E L+V+E+M G L L PL + +A
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG 266
A G+ +L G ++RD T N L+ K+ DFG+++ D V R +
Sbjct: 165 SQVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 267 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADK 326
+ PE ++ T++SDV+SFGVVL EI T K+P W + L++
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT-----YGKQP--------WYQ--LSNT 267
Query: 327 RKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ I R EL +V + C R+P+ R S+ +V
Sbjct: 268 EAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 310
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 129/277 (46%), Gaps = 36/277 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ NG VAVKSLK G ++AE + + QL H
Sbjct: 29 LGAGQFGEVWMGYY--NGHT--------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 77
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L + + ++ E+M GSL + L + I L + + +A A+G+AF+
Sbjct: 78 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
+ I+RD + +NIL+ + K++DFGLA+ + T + APE + G
Sbjct: 137 N--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINYG 193
Query: 280 HLTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 194 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD- 241
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+++ QL C P+ RP+ D + VL
Sbjct: 242 ------NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 272
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 52/279 (18%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
LG G FG V+ G W NG VA+K+LKP G ++ E + +L H
Sbjct: 17 LGNGQFGEVWMGTW---NGNT--------KVAIKTLKP-GTMSPESFLEEAQIMKKLKHD 64
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR---RTIPLPWSNRIKIALGAAKGLAFL 216
LV+L + ++ +V E+M +GSL + L R + LP N + +A A G+A++
Sbjct: 65 KLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLP--NLVDMAAQVAAGMAYI 121
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVSTRVVGTYG 269
+ I+RD +++NIL+ + K++DFGLA+ QG K +
Sbjct: 122 ERMN--YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK-------- 171
Query: 270 YAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKL 329
+ APE + G T KSDV+SFG++L E++T R P N R+ L +
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRV-----PYPGMN----NREVLEQVERG 222
Query: 330 YQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
Y++ P+ + SL +L +C +DP+ RP+ +
Sbjct: 223 YRMPCPQ-DCPISL------HELMIHCWKKDPEERPTFE 254
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 19 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV+L+G C + ++ EFMT G+L ++L R S + + + A +
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+ I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 281 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 340
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDPSQVYELLEKDYRME 230
Query: 341 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+KV +L C +P RPS E+
Sbjct: 231 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEVDFLGQLH 157
LG+G FG V +G AP+ G ++VAVK LKPD L + +++ EV+ + L
Sbjct: 20 LGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
H NL++L G + ++ V E GSL + L + + A+ A+G+ +L
Sbjct: 74 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV--STRVVGTYGYAAPEY 275
S+ I+RD N+LL + K+ DFGL +A PQ D +V R V + + APE
Sbjct: 133 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPES 189
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ T + SD + FGV L E+ T
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEVDFLGQLH 157
LG+G FG V +G AP+ G ++VAVK LKPD L + +++ EV+ + L
Sbjct: 16 LGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
H NL++L G + ++ V E GSL + L + + A+ A+G+ +L
Sbjct: 70 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV--STRVVGTYGYAAPEY 275
S+ I+RD N+LL + K+ DFGL +A PQ D +V R V + + APE
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPES 185
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ T + SD + FGV L E+ T
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEVDFLGQLH 157
LG+G FG V +G AP+ G ++VAVK LKPD L + +++ EV+ + L
Sbjct: 26 LGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
H NL++L G + ++ V E GSL + L + + A+ A+G+ +L
Sbjct: 80 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV--STRVVGTYGYAAPEY 275
S+ I+RD N+LL + K+ DFGL +A PQ D +V R V + + APE
Sbjct: 139 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPES 195
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ T + SD + FGV L E+ T
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 18/205 (8%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V+KG W +G K + V + P LQ + EV L + H
Sbjct: 32 IGSGSFGTVYKGKW---HGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHV 80
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
N++ +GY + Q +V ++ SL +HL I IA A+G+ +LH
Sbjct: 81 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM-- 277
S +I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 140 S--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 278 -TGHLTSKSDVYSFGVVLLEILTGR 301
+ + +SDVY+FG+VL E++TG+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 138/306 (45%), Gaps = 35/306 (11%)
Query: 83 FTFQELKSATGNF---------RPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVK 133
FTF++ A F + + ++G G FG V G ++ P K I VA+K
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLK----VPGK--REICVAIK 63
Query: 134 SLKPDGL-QGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR 192
+LK + R++++E +GQ HPN++ L G + +++ E+M GSL+ L +
Sbjct: 64 TLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK 123
Query: 193 RTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAG 252
+ + G G+ +L S ++RD NIL++S K+SDFG+++
Sbjct: 124 NDGRFTVIQLVGMLRGIGSGMKYLSDMS--AVHRDLAARNILVNSNLVCKVSDFGMSRVL 181
Query: 253 PQGDKTHVSTRVVGT-YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSG 311
+ +TR + APE + TS SDV+S+G+V+ E+++ G
Sbjct: 182 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS----------YG 231
Query: 312 EQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
E+ + Q + + + P ++ +L QL +C ++ RP ++V
Sbjct: 232 ERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALH------QLMLDCWQKERSDRPKFGQIV 285
Query: 372 KVLTPL 377
+L L
Sbjct: 286 NMLDKL 291
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ +
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 147
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK--AGPQGDKTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + H T + A
Sbjct: 148 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMAL 205
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEVDFLGQLH 157
LG+G FG V +G AP+ G ++VAVK LKPD L + +++ EV+ + L
Sbjct: 16 LGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
H NL++L G + ++ V E GSL + L + + A+ A+G+ +L
Sbjct: 70 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV--STRVVGTYGYAAPEY 275
S+ I+RD N+LL + K+ DFGL +A PQ D +V R V + + APE
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCAPES 185
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ T + SD + FGV L E+ T
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 30/284 (10%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQL 156
+ I+G G G V G + G + VA+K+LK + R ++++E +GQ
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQ------RDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFL 216
HPN+++L G ++V E+M GSL+ L + + G G+ +L
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA---GPQGDKTHVSTRVVGTYGYAAP 273
++RD N+L+DS K+SDFGL++ P T ++ + AP
Sbjct: 168 --SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI--PIRWTAP 223
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + +S SDV+SFGVV+ E+L +RP + R + V
Sbjct: 224 EAIAFRTFSSASDVWSFGVVMWEVLA-----YGERP-----------YWNMTNRDVISSV 267
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
+ L + + QL +C +D RP ++V VL L
Sbjct: 268 EEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 121/282 (42%), Gaps = 26/282 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQL 156
+ I+G G G V G + G + VA+K+LK + R ++++E +GQ
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQ------RDVPVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFL 216
HPN+++L G ++V E+M GSL+ L + + G G+ +L
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQG-DKTHVSTRVVGTYGYAAPEY 275
++RD N+L+DS K+SDFGL++ D + +T + APE
Sbjct: 168 --SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA 225
Query: 276 VMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDP 335
+ +S SDV+SFGVV+ E+L +RP R + V+
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLA-----YGERPYWNMT-----------NRDVISSVEE 269
Query: 336 RLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
L + + QL +C +D RP ++V VL L
Sbjct: 270 GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 129/277 (46%), Gaps = 36/277 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ NG VAVKSLK G ++AE + + QL H
Sbjct: 27 LGAGQFGEVWMGYY--NGHT--------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 75
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L + + ++ E+M GSL + L + I L + + +A A+G+AF+
Sbjct: 76 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
+ I+RD + +NIL+ + K++DFGLA+ + T + APE + G
Sbjct: 135 N--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINYG 191
Query: 280 HLTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD- 239
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+++ QL C P+ RP+ D + VL
Sbjct: 240 ------NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 270
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 132/283 (46%), Gaps = 38/283 (13%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VAVK +K +G E+ E + +L HP
Sbjct: 16 LGSGQFGVVKLG----------KWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPK 64
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LVK G C ++ +V E+++ G L N+L L S +++ +G+AFL S
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE--S 122
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT---YGYAAPEYVM 277
I+RD N L+D + K+SDFG+ + D +VS+ VGT ++APE
Sbjct: 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL--DDQYVSS--VGTKFPVKWSAPEVFH 178
Query: 278 TGHLTSKSDVYSFGVVLLEILT-GRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPR 336
+SKSDV++FG+++ E+ + G+ D S +V Q +LY+ P
Sbjct: 179 YFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS---EVVLKVSQ----GHRLYR---PH 228
Query: 337 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
L + Q+ Y+C P+ RP+ +++ + PL++
Sbjct: 229 L-------ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 129/277 (46%), Gaps = 36/277 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ NG VAVKSLK G ++AE + + QL H
Sbjct: 30 LGAGQFGEVWMGYY--NGHT--------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 78
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L + + ++ E+M GSL + L + I L + + +A A+G+AF+
Sbjct: 79 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
+ I+RD + +NIL+ + K++DFGLA+ + T + APE + G
Sbjct: 138 N--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINYG 194
Query: 280 HLTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 195 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD- 242
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+++ QL C P+ RP+ D + VL
Sbjct: 243 ------NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 273
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 129/277 (46%), Gaps = 36/277 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ NG VAVKSLK G ++AE + + QL H
Sbjct: 21 LGAGQFGEVWMGYY--NGHT--------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 69
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L + + ++ E+M GSL + L + I L + + +A A+G+AF+
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
+ I+RD + +NIL+ + K++DFGLA+ + T + APE + G
Sbjct: 129 N--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINYG 185
Query: 280 HLTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD- 233
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+++ QL C P+ RP+ D + VL
Sbjct: 234 ------NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 129/277 (46%), Gaps = 36/277 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ NG VAVKSLK G ++AE + + QL H
Sbjct: 31 LGAGQFGEVWMGYY--NGHT--------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 79
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L + + ++ E+M GSL + L + I L + + +A A+G+AF+
Sbjct: 80 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
+ I+RD + +NIL+ + K++DFGLA+ + T + APE + G
Sbjct: 139 N--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYG 195
Query: 280 HLTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 196 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD- 243
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+++ QL C P+ RP+ D + VL
Sbjct: 244 ------NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 274
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 41/291 (14%)
Query: 93 GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAE 149
NFR + +G G F V++ A G+ VA+K ++ L + + + E
Sbjct: 32 ANFRIEKKIGRGQFSEVYRA---------ACLLDGVPVALKKVQIFDLMDAKARADCIKE 82
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLE---NHLFRRTIPLPWSNRIKIA 206
+D L QL+HPN++K IED++ +V E G L H ++ +P K
Sbjct: 83 IDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF 142
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG 266
+ L +H S V++RD K +N+ + + KL D GL + KT + +VG
Sbjct: 143 VQLCSALEHMH--SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVG 198
Query: 267 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADK 326
T Y +PE + KSD++S G +L E + A + DK
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYE------------------MAALQSPFYGDK 240
Query: 327 RKLYQIVDPRLELNY----SLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKV 373
LY + + +Y S +++ QL C++ DP+ RP + V V
Sbjct: 241 MNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV 291
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 135/297 (45%), Gaps = 40/297 (13%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR--EWVAEVDFLGQLH 157
ILGEG FG V +G +++ + G+ + VAVK++K D E+++E +
Sbjct: 41 ILGEGEFGSVMEGNLKQ------EDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS 94
Query: 158 HPNLVKLIGYCIEDDQR-----LLVYEFMTRGSLENHLFRRTIP-----LPWSNRIKIAL 207
HPN+++L+G CIE + +++ FM G L +L + +P +K +
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A G+ +L + ++RD N +L + ++DFGL+K GD
Sbjct: 155 DIALGMEYL--SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMP 212
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
+ A E + TSKSDV++FGV + EI T R M G QN + YL
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIAT--RGMTPY--PGVQNHEMY--DYLLHGH 266
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD----EVVKVLTPLQDL 380
+L Q D + ++ ++ Y+C DP RP+ ++ K+L L D+
Sbjct: 267 RLKQPED----------CLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPDV 313
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 129/277 (46%), Gaps = 36/277 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ NG VAVKSLK G ++AE + + QL H
Sbjct: 23 LGAGQFGEVWMGYY--NGHT--------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 71
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L + + ++ E+M GSL + L + I L + + +A A+G+AF+
Sbjct: 72 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
+ I+RD + +NIL+ + K++DFGLA+ + T + APE + G
Sbjct: 131 N--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINYG 187
Query: 280 HLTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 188 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD- 235
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+++ QL C P+ RP+ D + VL
Sbjct: 236 ------NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 266
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+G G FG V+KG W +G K + V + P LQ + EV L + H
Sbjct: 32 IGSGSFGTVYKGKW---HGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHV 80
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
N++ +GY Q +V ++ SL +HL I IA A+G+ +LH
Sbjct: 81 NILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM-- 277
S +I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 140 S--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 278 -TGHLTSKSDVYSFGVVLLEILTGR 301
+ + +SDVY+FG+VL E++TG+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 129/277 (46%), Gaps = 36/277 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ NG VAVKSLK G ++AE + + QL H
Sbjct: 26 LGAGQFGEVWMGYY--NGHT--------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 74
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L + + ++ E+M GSL + L + I L + + +A A+G+AF+
Sbjct: 75 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 133
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
+ I+RD + +NIL+ + K++DFGLA+ + T + APE + G
Sbjct: 134 N--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYG 190
Query: 280 HLTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 191 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD- 238
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+++ QL C P+ RP+ D + VL
Sbjct: 239 ------NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 269
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 42/277 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 22 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL-------FRRTIPLPWSNRIKIALGAAKGL 213
LV+L+G C + ++ EFMT G+L ++L + L + +I A+ +
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
F+H RD N L+ + K++DFGL++ GD + AP
Sbjct: 132 NFIH--------RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAP 182
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + KSDV++FGV+L EI T S P D ++Y+++
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELL 226
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ + +KV +L C +P RPS E+
Sbjct: 227 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 129/277 (46%), Gaps = 36/277 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ NG VAVKSLK G ++AE + + QL H
Sbjct: 27 LGAGQFGEVWMGYY--NGHT--------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 75
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L + + ++ E+M GSL + L + I L + + +A A+G+AF+
Sbjct: 76 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
+ I+RD + +NIL+ + K++DFGLA+ + T + APE + G
Sbjct: 135 N--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYG 191
Query: 280 HLTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD- 239
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+++ QL C P+ RP+ D + VL
Sbjct: 240 ------NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 129/277 (46%), Gaps = 36/277 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ NG VAVKSLK G ++AE + + QL H
Sbjct: 22 LGAGQFGEVWMGYY--NGHT--------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L + + ++ E+M GSL + L + I L + + +A A+G+AF+
Sbjct: 71 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
+ I+RD + +NIL+ + K++DFGLA+ + T + APE + G
Sbjct: 130 N--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINYG 186
Query: 280 HLTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 187 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD- 234
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+++ QL C P+ RP+ D + VL
Sbjct: 235 ------NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 129/277 (46%), Gaps = 36/277 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ NG VAVKSLK G ++AE + + QL H
Sbjct: 21 LGAGQFGEVWMGYY--NGHT--------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 69
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L + + ++ E+M GSL + L + I L + + +A A+G+AF+
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
+ I+RD + +NIL+ + K++DFGLA+ + T + APE + G
Sbjct: 129 N--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINYG 185
Query: 280 HLTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD- 233
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+++ QL C P+ RP+ D + VL
Sbjct: 234 ------NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHH 158
S LG+G FG V E P +G VAVK L+ G R++ E+ L LH
Sbjct: 29 SQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 83
Query: 159 PNLVKL--IGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFL 216
+VK + Y LV E++ G L + L R L S + + KG+ +L
Sbjct: 84 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 143
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPE 274
GS ++RD NIL++SE + K++DFGLAK P DK + R G + APE
Sbjct: 144 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPE 200
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILT 299
+ + +SDV+SFGVVL E+ T
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ + ++G+L +L R P + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A+G+ +L S+ I+RD N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHH 158
S LG+G FG V E P +G VAVK L+ G R++ E+ L LH
Sbjct: 16 SQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 70
Query: 159 PNLVKL--IGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFL 216
+VK + Y LV E++ G L + L R L S + + KG+ +L
Sbjct: 71 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 130
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPE 274
GS ++RD NIL++SE + K++DFGLAK P DK + R G + APE
Sbjct: 131 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPE 187
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILT 299
+ + +SDV+SFGVVL E+ T
Sbjct: 188 SLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 42/277 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL-------FRRTIPLPWSNRIKIALGAAKGL 213
LV+L+G C + ++ EFMT G+L ++L + L + +I A+ +
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
F+H RD N L+ + K++DFGL++ GD + AP
Sbjct: 136 NFIH--------RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAP 186
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + KSDV++FGV+L EI T S P D ++Y+++
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELL 230
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ + +KV +L C +P RPS E+
Sbjct: 231 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 42/277 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL-------FRRTIPLPWSNRIKIALGAAKGL 213
LV+L+G C + ++ EFMT G+L ++L + L + +I A+ +
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
F+H RD N L+ + K++DFGL++ GD + AP
Sbjct: 136 NFIH--------RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAP 186
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + KSDV++FGV+L EI T S P D ++Y+++
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELL 230
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ + +KV +L C +P RPS E+
Sbjct: 231 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHH 158
S LG+G FG V E P +G VAVK L+ G R++ E+ L LH
Sbjct: 17 SQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 71
Query: 159 PNLVKL--IGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFL 216
+VK + Y LV E++ G L + L R L S + + KG+ +L
Sbjct: 72 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 131
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPE 274
GS ++RD NIL++SE + K++DFGLAK P DK + R G + APE
Sbjct: 132 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPE 188
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILT 299
+ + +SDV+SFGVVL E+ T
Sbjct: 189 SLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 42/277 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL-------FRRTIPLPWSNRIKIALGAAKGL 213
LV+L+G C + ++ EFMT G+L ++L + L + +I A+ +
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
F+H RD N L+ + K++DFGL++ GD + AP
Sbjct: 136 NFIH--------RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAP 186
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + KSDV++FGV+L EI T S P D ++Y+++
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELL 230
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ + +KV +L C +P RPS E+
Sbjct: 231 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV+L+G C + ++ EFMT G+L ++L R S + + + A +
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+ I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 281 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 340
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 232
Query: 341 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+KV +L C +P RPS E+
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV+L+G C + ++ EFMT G+L ++L R S + + + A +
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+ I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 281 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 340
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 232
Query: 341 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+KV +L C +P RPS E+
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEVDFLGQLH 157
LG+G FG V +G AP+ G ++VAVK LKPD L + +++ EV+ + L
Sbjct: 26 LGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
H NL++L G + ++ V E GSL + L + + A+ A+G+ +L
Sbjct: 80 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV--STRVVGTYGYAAPEY 275
S+ I+RD N+LL + K+ DFGL +A PQ D V R V + + APE
Sbjct: 139 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPES 195
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ T + SD + FGV L E+ T
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV+L+G C + ++ EFMT G+L ++L R S + + + A +
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+ I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 281 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 340
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 232
Query: 341 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+KV +L C +P RPS E+
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 15/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEVDFLGQLH 157
LG+G FG V +G AP+ G ++VAVK LKPD L + +++ EV+ + L
Sbjct: 16 LGDGSFGVVRRG----EWDAPS--GKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
H NL++L G + ++ V E GSL + L + + A+ A+G+ +L
Sbjct: 70 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV--STRVVGTYGYAAPEY 275
S+ I+RD N+LL + K+ DFGL +A PQ D V R V + + APE
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCAPES 185
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ T + SD + FGV L E+ T
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P L + +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A A+G+ +L S+ I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTN 211
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV+L EI T
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV+L+G C + ++ EFMT G+L ++L R S + + + A +
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEK 134
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+ I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 281 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 340
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 237
Query: 341 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+KV +L C +P RPS E+
Sbjct: 238 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 19 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV+L+G C + ++ EFMT G+L ++L R S + + + A +
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+ I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNK 186
Query: 281 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 340
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDPSQVYELLEKDYRME 230
Query: 341 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+KV +L C +P RPS E+
Sbjct: 231 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 129/277 (46%), Gaps = 36/277 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ NG VAVKSLK G ++AE + + QL H
Sbjct: 21 LGAGQFGEVWMGYY--NGHT--------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 69
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L + + ++ E+M GSL + L + I L + + +A A+G+AF+
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
+ I+RD + +NIL+ + K++DFGLA+ + T + APE + G
Sbjct: 129 N--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYG 185
Query: 280 HLTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD- 233
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+++ QL C P+ RP+ D + VL
Sbjct: 234 ------NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ +
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 148
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD--KTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + H T + A
Sbjct: 149 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 42/277 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 25 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 74
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL-------FRRTIPLPWSNRIKIALGAAKGL 213
LV+L+G C + ++ EFMT G+L ++L + L + +I A+ +
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 134
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
F+H RD N L+ + K++DFGL++ GD + AP
Sbjct: 135 NFIH--------RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAP 185
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + KSDV++FGV+L EI T S P D ++Y+++
Sbjct: 186 ESLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELL 229
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ + +KV +L C +P RPS E+
Sbjct: 230 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 128/277 (46%), Gaps = 36/277 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ NG VAVKSLK G ++AE + + QL H
Sbjct: 16 LGAGQFGEVWMGYY--NGHT--------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 64
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L + + ++ E+M GSL + L + I L + + +A A+G+AF+
Sbjct: 65 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 121
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
I+RD + +NIL+ + K++DFGLA+ + T + APE + G
Sbjct: 122 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYG 180
Query: 280 HLTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 181 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD- 228
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+++ QL C P+ RP+ D + VL
Sbjct: 229 ------NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 259
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHH 158
S LG+G FG V E P +G VAVK L+ G R++ E+ L LH
Sbjct: 13 SQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 67
Query: 159 PNLVKL--IGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFL 216
+VK + Y + LV E++ G L + L R L S + + KG+ +L
Sbjct: 68 DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 127
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT--YGYAAPE 274
GS ++RD NIL++SE + K++DFGLAK P DK R G + APE
Sbjct: 128 --GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDXXVVREPGQSPIFWYAPE 184
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILT 299
+ + +SDV+SFGVVL E+ T
Sbjct: 185 SLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 54 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 107
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ +
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 167
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD--KTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + H T + A
Sbjct: 168 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 225
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 226 ESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 122/270 (45%), Gaps = 28/270 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV+L+G C + ++ EFMT G+L ++L R S + + + A +
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+ I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 281 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 340
+ KSDV++FGV+L EI T S P D ++Y++++ +
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELLEKDYRME 232
Query: 341 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+KV +L C +P RPS E+
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 35 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 88
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ +
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 148
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD--KTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + H T + A
Sbjct: 149 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 42/277 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL-------FRRTIPLPWSNRIKIALGAAKGL 213
LV+L+G C + ++ EFMT G+L ++L + L + +I A+ +
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
F+H RD N L+ + K++DFGL++ GD + AP
Sbjct: 131 NFIH--------RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAP 181
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + KSDV++FGV+L EI T S P D ++Y+++
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELL 225
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ + +KV +L C +P RPS E+
Sbjct: 226 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 42/277 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL-------FRRTIPLPWSNRIKIALGAAKGL 213
LV+L+G C + ++ EFMT G+L ++L + L + +I A+ +
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
F+H RD N L+ + K++DFGL++ GD + AP
Sbjct: 136 NFIH--------RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAP 186
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + KSDV++FGV+L EI T S P D ++Y+++
Sbjct: 187 ESLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELL 230
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ + +KV +L C +P RPS E+
Sbjct: 231 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 42/277 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 22 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL-------FRRTIPLPWSNRIKIALGAAKGL 213
LV+L+G C + ++ EFMT G+L ++L + L + +I A+ +
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
F+H RD N L+ + K++DFGL++ GD + AP
Sbjct: 132 NFIH--------RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAP 182
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + KSDV++FGV+L EI T S P D ++Y+++
Sbjct: 183 ESLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELL 226
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ + +KV +L C +P RPS E+
Sbjct: 227 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 21 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P L + +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A A+G+ +L S+ I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 139 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV+L EI T
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 32 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 85
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ +
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 145
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD--KTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + H T + A
Sbjct: 146 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 203
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 42/277 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL-------FRRTIPLPWSNRIKIALGAAKGL 213
LV+L+G C + ++ EFMT G+L ++L + L + +I A+ +
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
F+H RD N L+ + K++DFGL++ GD + AP
Sbjct: 133 NFIH--------RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAP 183
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + KSDV++FGV+L EI T S P D ++Y+++
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELL 227
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ + +KV +L C +P RPS E+
Sbjct: 228 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 27 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 80
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ +
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 140
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD--KTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + H T + A
Sbjct: 141 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 34 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 87
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ +
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 147
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD--KTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + H T + A
Sbjct: 148 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 205
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 42/277 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL-------FRRTIPLPWSNRIKIALGAAKGL 213
LV+L+G C + ++ EFMT G+L ++L + L + +I A+ +
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
F+H RD N L+ + K++DFGL++ GD + AP
Sbjct: 133 NFIH--------RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAP 183
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + KSDV++FGV+L EI T S P D ++Y+++
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELL 227
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ + +KV +L C +P RPS E+
Sbjct: 228 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 42/277 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL-------FRRTIPLPWSNRIKIALGAAKGL 213
LV+L+G C + ++ EFMT G+L ++L + L + +I A+ +
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
F+H RD N L+ + K++DFGL++ GD + AP
Sbjct: 133 NFIH--------RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAP 183
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + KSDV++FGV+L EI T S P D ++Y+++
Sbjct: 184 ESLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELL 227
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ + +KV +L C +P RPS E+
Sbjct: 228 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 30 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 83
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ +
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 143
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD--KTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + H T + A
Sbjct: 144 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 42/277 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL-------FRRTIPLPWSNRIKIALGAAKGL 213
LV+L+G C + ++ EFMT G+L ++L + L + +I A+ +
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
F+H RD N L+ + K++DFGL++ GD + AP
Sbjct: 131 NFIH--------RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAP 181
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + KSDV++FGV+L EI T S P D ++Y+++
Sbjct: 182 ESLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELL 225
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ + +KV +L C +P RPS E+
Sbjct: 226 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 53 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 106
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ +
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 166
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD--KTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + H T + A
Sbjct: 167 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 224
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 225 ESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP +TVAVK LK D + + V+E++ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ + ++G+L +L R P + + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A+G+ +L S+ I+RD N+L+ K++DFGLA+ D +T
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV++ EI T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 25 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P L + +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A A+G+ +L S+ I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 143 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 200
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV+L EI T
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 42/277 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V++G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 34 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 83
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL-------FRRTIPLPWSNRIKIALGAAKGL 213
LV+L+G C + ++ EFMT G+L ++L + L + +I A+ +
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 143
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
F+H RD N L+ + K++DFGL++ GD + AP
Sbjct: 144 NFIH--------RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAP 194
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + KSDV++FGV+L EI T S P D ++Y+++
Sbjct: 195 ESLAYNKFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYELL 238
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ + +KV +L C +P RPS E+
Sbjct: 239 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P L + +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A A+G+ +L S+ I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV+L EI T
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 29 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P L + +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A A+G+ +L S+ I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 147 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 204
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV+L EI T
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 12/206 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQL 156
+ ++G G FG V+ G + +N G I AVKSL + + +++ E +
Sbjct: 33 NEVIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 86
Query: 157 HHPNLVKLIGYCIEDD-QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
HPN++ L+G C+ + L+V +M G L N + T + I L AKG+ +
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKY 146
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD--KTHVSTRVVGTYGYAAP 273
L S+ ++RD N +LD ++ K++DFGLA+ + H T + A
Sbjct: 147 L--ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILT 299
E + T T+KSDV+SFGV+L E++T
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 126/274 (45%), Gaps = 48/274 (17%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G FG V G G VAVK +K D + ++AE + QL H N
Sbjct: 20 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 66
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSN-RIKIALGAAKGLAFLHG 218
LV+L+G +E+ L +V E+M +GSL ++L R + + +K +L + + +L G
Sbjct: 67 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGYAAPEYVM 277
+ ++RD N+L+ + AK+SDFGL K A D + + + APE +
Sbjct: 127 NN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 178
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
++KSDV+SFG++L EI + R V + R L D V PR+
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYSFGR-------------VPYPRIPLKD-------VVPRV 218
Query: 338 ELNYSLKGVQ----KVSQLAYNCLSRDPKSRPSM 367
E Y + V ++ NC D RPS
Sbjct: 219 EKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSF 252
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 126/274 (45%), Gaps = 48/274 (17%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G FG V G G VAVK +K D + ++AE + QL H N
Sbjct: 14 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 60
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSN-RIKIALGAAKGLAFLHG 218
LV+L+G +E+ L +V E+M +GSL ++L R + + +K +L + + +L G
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGYAAPEYVM 277
+ ++RD N+L+ + AK+SDFGL K A D + + + APE +
Sbjct: 121 NN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 172
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
++KSDV+SFG++L EI + R V + R L D V PR+
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGR-------------VPYPRIPLKD-------VVPRV 212
Query: 338 ELNYSLKGVQ----KVSQLAYNCLSRDPKSRPSM 367
E Y + V ++ NC D RPS
Sbjct: 213 EKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSF 246
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P L + +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A A+G+ +L S+ I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV+L EI T
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 126/274 (45%), Gaps = 48/274 (17%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G FG V G G VAVK +K D + ++AE + QL H N
Sbjct: 29 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 75
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSN-RIKIALGAAKGLAFLHG 218
LV+L+G +E+ L +V E+M +GSL ++L R + + +K +L + + +L G
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGYAAPEYVM 277
+ ++RD N+L+ + AK+SDFGL K A D + + + APE +
Sbjct: 136 NN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 187
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
++KSDV+SFG++L EI + R V + R L D V PR+
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYSFGR-------------VPYPRIPLKD-------VVPRV 227
Query: 338 ELNYSLKGVQ----KVSQLAYNCLSRDPKSRPSM 367
E Y + V ++ NC D RPS
Sbjct: 228 EKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSF 261
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 43 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 92
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
++ +GY + Q +V ++ SL +HL I IA A+G+ +LH S
Sbjct: 93 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 151
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 152 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 281 ---LTSKSDVYSFGVVLLEILTGR 301
+ +SDVY+FG+VL E++TG+
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 28/281 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQL 156
+ ++G G FG V G ++ G I VA+K+LK + R ++++E +GQ
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKRE------IFVAIKTLKSGYTEKQRRDFLSEASIMGQF 65
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFL 216
HPN++ L G + +++ EFM GSL++ L + + + G A G+ +L
Sbjct: 66 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 125
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG---TYGYAAP 273
++R NIL++S K+SDFGL++ T +G + AP
Sbjct: 126 --ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + TS SDV+S+G+V+ E+++ +RP + + + +
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSY-----GERPYWDMT-----------NQDVINAI 227
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+ L + + QL +C +D RP ++V L
Sbjct: 228 EQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P L + +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A A+G+ +L S+ I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 154 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV+L EI T
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 28 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P L + +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A A+G+ +L S+ I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 146 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 203
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV+L EI T
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 21 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
++ +GY + Q +V ++ SL +HL I IA A+G+ +LH S
Sbjct: 71 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMT-- 278
+I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 130 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 279 -GHLTSKSDVYSFGVVLLEILTGR 301
+ +SDVY+FG+VL E++TG+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 44 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 93
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
++ +GY + Q +V ++ SL +HL I IA A+G+ +LH S
Sbjct: 94 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 153 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 281 ---LTSKSDVYSFGVVLLEILTGR 301
+ +SDVY+FG+VL E++TG+
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 18 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 67
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
++ +GY + Q +V ++ SL +HL I IA A+G+ +LH S
Sbjct: 68 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 126
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMT-- 278
+I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 127 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 279 -GHLTSKSDVYSFGVVLLEILTGR 301
+ +SDVY+FG+VL E++TG+
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 21 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
++ +GY + Q +V ++ SL +HL I IA A+G+ +LH S
Sbjct: 71 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 130 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 281 ---LTSKSDVYSFGVVLLEILTGR 301
+ +SDVY+FG+VL E++TG+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 36 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 85
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
++ +GY + Q +V ++ SL +HL I IA A+G+ +LH S
Sbjct: 86 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 144
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 145 --IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 281 ---LTSKSDVYSFGVVLLEILTGR 301
+ +SDVY+FG+VL E++TG+
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 124/274 (45%), Gaps = 48/274 (17%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G FG V G G VAVK +K D + ++AE + QL H N
Sbjct: 201 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 247
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRR-TIPLPWSNRIKIALGAAKGLAFLHG 218
LV+L+G +E+ L +V E+M +GSL ++L R L +K +L + + +L G
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGYAAPEYVM 277
+ ++RD N+L+ + AK+SDFGL K A D + + + APE +
Sbjct: 308 NN--FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALR 359
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
++KSDV+SFG++L EI + R V + R L D V PR+
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYSFGR-------------VPYPRIPLKD-------VVPRV 399
Query: 338 ELNYSLKGVQKVSQLAY----NCLSRDPKSRPSM 367
E Y + Y NC D +RP+
Sbjct: 400 EKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTF 433
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 65
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
++ +GY + Q +V ++ SL +HL I IA A+G+ +LH S
Sbjct: 66 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMT-- 278
+I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 125 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 279 -GHLTSKSDVYSFGVVLLEILTGR 301
+ +SDVY+FG+VL E++TG+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 109/216 (50%), Gaps = 17/216 (7%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWV- 147
K+ +F +LG+G FG VF +P SG A+K LK L+ R+ V
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLV------RKVTRPDSGHLYAMKVLKKATLKV-RDRVR 76
Query: 148 --AEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
E D L ++HP +VKL Y + + +L L+ +F+ G L L + + +
Sbjct: 77 TKMERDILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 135
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
+A A GL LH S +IYRD K NILLD E + KL+DFGL+K +K S
Sbjct: 136 LA-ELALGLDHLH--SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--F 190
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GT Y APE V + +D +S+GV++ E+LTG
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 65
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
++ +GY + Q +V ++ SL +HL I IA A+G+ +LH S
Sbjct: 66 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMT-- 278
+I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 125 --IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 279 -GHLTSKSDVYSFGVVLLEILTGR 301
+ +SDVY+FG+VL E++TG+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 16/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 44 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 93
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
++ +GY + Q +V ++ SL +HL I IA A+G+ +LH S
Sbjct: 94 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 153 --IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 281 ---LTSKSDVYSFGVVLLEILTGR 301
+ +SDVY+FG+VL E++TG+
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 16/204 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V+KG + +G K + V + P LQ + EV L + H N
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVK-----MLNVTAPTPQQLQAFKN---EVGVLRKTRHVN 65
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
++ +GY Q +V ++ SL +HL I IA A+G+ +LH S
Sbjct: 66 ILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMT-- 278
+I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE +
Sbjct: 125 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 279 -GHLTSKSDVYSFGVVLLEILTGR 301
+ +SDVY+FG+VL E++TG+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 128/277 (46%), Gaps = 36/277 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ NG VAVKSLK G ++AE + + QL H
Sbjct: 17 LGAGQFGEVWMGYY--NGHT--------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 65
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L + + ++ E+M GSL + L + I L + + +A A+G+AF+
Sbjct: 66 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 122
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
I+R+ + +NIL+ + K++DFGLA+ + T + APE + G
Sbjct: 123 ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYG 181
Query: 280 HLTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 182 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD- 229
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+++ QL C P+ RP+ D + VL
Sbjct: 230 ------NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 260
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 26/285 (9%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL-QGHREWVAEVDFL 153
+ + ++G G FG V G ++ P K I VA+K+LK + R++++E +
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLK----VPGK--REICVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
GQ HPN++ L G + +++ E+M GSL+ L + + + G G+
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 129
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT-YGYAA 272
+L S ++RD NIL++S K+SDFG+++ + +TR + A
Sbjct: 130 KYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 187
Query: 273 PEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQI 332
PE + TS SDV+S+G+V+ E+++ GE+ + Q + +
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMS----------YGERPYWDMSNQDVIKAIEEGYR 237
Query: 333 VDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
+ P ++ +L QL +C ++ RP ++V +L L
Sbjct: 238 LPPPMDCPIALH------QLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 134/303 (44%), Gaps = 30/303 (9%)
Query: 69 PAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSG 127
PAP K + + + + + LG G +G V++G W + +
Sbjct: 196 PAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS---------- 245
Query: 128 ITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLE 187
+TVAVK+LK D ++ E++ E + ++ HPNLV+L+G C + ++ EFMT G+L
Sbjct: 246 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 304
Query: 188 NHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFG 247
++L R S + + + A + + I+R+ N L+ + K++DFG
Sbjct: 305 DYL-RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFG 363
Query: 248 LAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKK 307
L++ GD + APE + + KSDV++FGV+L EI T S
Sbjct: 364 LSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---P 419
Query: 308 RPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSM 367
P D ++Y++++ + +KV +L C +P RPS
Sbjct: 420 YPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 466
Query: 368 DEV 370
E+
Sbjct: 467 AEI 469
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 135/310 (43%), Gaps = 44/310 (14%)
Query: 69 PAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSG 127
PAP K + + + + + LG G +G V++G W + +
Sbjct: 235 PAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYS---------- 284
Query: 128 ITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLE 187
+TVAVK+LK D ++ E++ E + ++ HPNLV+L+G C + ++ EFMT G+L
Sbjct: 285 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 343
Query: 188 NHL-------FRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN 240
++L + L + +I A+ + F+H R+ N L+ +
Sbjct: 344 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH--------RNLAARNCLVGENHL 395
Query: 241 AKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
K++DFGL++ GD + APE + + KSDV++FGV+L EI T
Sbjct: 396 VKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 454
Query: 301 RRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRD 360
S P D ++Y++++ + +KV +L C +
Sbjct: 455 GMS---PYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 498
Query: 361 PKSRPSMDEV 370
P RPS E+
Sbjct: 499 PSDRPSFAEI 508
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 131/285 (45%), Gaps = 26/285 (9%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL-QGHREWVAEVDFL 153
+ + ++G G FG V G ++ P K I VA+K+LK + R++++E +
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLK----VPGK--REICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
GQ HPN++ L G + +++ E+M GSL+ L + + + G G+
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 123
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT-YGYAA 272
+L S ++RD NIL++S K+SDFG+++ + +TR + A
Sbjct: 124 KYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 181
Query: 273 PEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQI 332
PE + TS SDV+S+G+V+ E+++ GE+ + Q + +
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMS----------YGERPYWDMSNQDVIKAIEEGYR 231
Query: 333 VDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
+ P ++ +L QL +C ++ RP ++V +L L
Sbjct: 232 LPPPMDCPIALH------QLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 134/310 (43%), Gaps = 44/310 (14%)
Query: 69 PAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSG 127
PAP K + + + + + LG G +G V++G W +
Sbjct: 193 PAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK----------YS 242
Query: 128 ITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLE 187
+TVAVK+LK D ++ E++ E + ++ HPNLV+L+G C + ++ EFMT G+L
Sbjct: 243 LTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 301
Query: 188 NHL-------FRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN 240
++L + L + +I A+ + F+H R+ N L+ +
Sbjct: 302 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH--------RNLAARNCLVGENHL 353
Query: 241 AKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
K++DFGL++ GD + APE + + KSDV++FGV+L EI T
Sbjct: 354 VKVADFGLSRL-MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY 412
Query: 301 RRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRD 360
S P D ++Y++++ + +KV +L C +
Sbjct: 413 GMS---PYPG-------------IDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 456
Query: 361 PKSRPSMDEV 370
P RPS E+
Sbjct: 457 PSDRPSFAEI 466
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 102/205 (49%), Gaps = 30/205 (14%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V W+ A VAVK++KP G ++AE + + L H
Sbjct: 190 LGAGQFGEV---WM-------ATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDK 238
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR---RTIPLPWSNRIKIALGAAKGLAFLH 217
LVKL + + ++ EFM +GSL + L PLP I + A+G+AF+
Sbjct: 239 LVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE 295
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM 277
+ I+RD + +NIL+ + K++DFGLA+ G + + APE +
Sbjct: 296 QRN--YIHRDLRAANILVSASLVCKIADFGLARVGAKF-----------PIKWTAPEAIN 342
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRR 302
G T KSDV+SFG++L+EI+T R
Sbjct: 343 FGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 21/216 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL-HH 158
LGEG FG V E G KP VAVK LK D + + ++E++ + + H
Sbjct: 77 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP---------------LPWSNRI 203
N++ L+G C +D ++ E+ ++G+L +L R P L + +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
A A+G+ +L S+ I+RD N+L+ + K++DFGLA+ D +T
Sbjct: 195 SCAYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 252
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV+L EI T
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD-GLQGHREWVAEVDFLGQL 156
+ ILGEG FG V++G G I VAVK+ K D L ++++E + L
Sbjct: 13 NRILGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 66
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFL 216
HP++VKLIG IE++ ++ E G L ++L R L + +L K +A+L
Sbjct: 67 DHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 125
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVS-TRVVGTYGYAAPEY 275
S ++RD NIL+ S KL DFGL++ D S TR+ + +PE
Sbjct: 126 E--SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPES 181
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ T+ SDV+ F V + EIL+
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILS 205
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 128/277 (46%), Gaps = 36/277 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G G V+ G+ NG VAVKSLK G ++AE + + QL H
Sbjct: 21 LGAGQAGEVWMGYY--NGHT--------KVAVKSLK-QGSMSPDAFLAEANLMKQLQHQR 69
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGG 219
LV+L + + ++ E+M GSL + L + I L + + +A A+G+AF+
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
+ I+RD + +NIL+ + K++DFGLA+ + T + APE + G
Sbjct: 129 N--YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXT-AREGAKFPIKWTAPEAINYG 185
Query: 280 HLTSKSDVYSFGVVLLEILTGRR--SMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
T KSDV+SFG++L EI+T R P QNL + Y++V P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRPD- 233
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+++ QL C P+ RP+ D + VL
Sbjct: 234 ------NCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD-GLQGHREWVAEVDFLGQL 156
+ ILGEG FG V++G G I VAVK+ K D L ++++E + L
Sbjct: 29 NRILGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 82
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFL 216
HP++VKLIG IE++ ++ E G L ++L R L + +L K +A+L
Sbjct: 83 DHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 141
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVS-TRVVGTYGYAAPEY 275
S ++RD NIL+ S KL DFGL++ D S TR+ + +PE
Sbjct: 142 E--SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPES 197
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ T+ SDV+ F V + EIL+
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILS 221
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD-GLQGHREWVAEVDFLGQL 156
+ ILGEG FG V++G G I VAVK+ K D L ++++E + L
Sbjct: 17 NRILGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL 70
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFL 216
HP++VKLIG IE++ ++ E G L ++L R L + +L K +A+L
Sbjct: 71 DHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 129
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVS-TRVVGTYGYAAPEY 275
S ++RD NIL+ S KL DFGL++ D S TR+ + +PE
Sbjct: 130 E--SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPES 185
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ T+ SDV+ F V + EIL+
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILS 209
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 113/252 (44%), Gaps = 24/252 (9%)
Query: 64 SDNPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAK 123
S +PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 2 SMDPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDK 55
Query: 124 PGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EF 180
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 56 TATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 115
Query: 181 MTRGSLENHL-FRRTIPLPW------------SNRIKIALGAAKGLAFLHGGSEPVIYRD 227
G+L +L +R +P+ + I + AKG+ FL S I+RD
Sbjct: 116 CKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL--ASRKXIHRD 173
Query: 228 FKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDV 287
NILL + K+ DFGLA+ + + APE + T +SDV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 288 YSFGVVLLEILT 299
+SFGV+L EI +
Sbjct: 234 WSFGVLLWEIFS 245
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 28/268 (10%)
Query: 45 RYLNASNRELCAPNEAHLSS-DNPDPAPTDEKSPCQLLQFTF---QELKSATGNFRPDSI 100
R ++ N + P A ++S D P P P D + + F +ELK + D++
Sbjct: 282 RRIDTLNSDGYTPEPARITSPDKPRPMPMD----TSVFESPFSDPEELKDKKLFLKRDNL 337
Query: 101 L------GEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFL 153
L G G FG V +G I VA+K LK + E + E +
Sbjct: 338 LIADIELGCGNFGSVRQGVYRMRKKQ-------IDVAIKVLKQGTEKADTEEMMREAQIM 390
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
QL +P +V+LIG C + + +LV E G L L + +P SN ++ + G+
Sbjct: 391 HQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGM 449
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY--GYA 271
+L + ++R+ N+LL + + AK+SDFGL+KA D ++ + R G + +
Sbjct: 450 KYLE--EKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL-GADDSYYTARSAGKWPLKWY 506
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILT 299
APE + +S+SDV+S+GV + E L+
Sbjct: 507 APECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 42/288 (14%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-----PDGLQGHREWVAEVDFLG 154
+G G FG V+KG W + VAVK LK P+ Q R EV L
Sbjct: 44 IGSGSFGTVYKGKWHGD-------------VAVKILKVVDPTPEQFQAFRN---EVAVLR 87
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
+ H N++ +GY +D+ +V ++ SL HL + I IA A+G+
Sbjct: 88 KTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMD 146
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
+LH ++ +I+RD K++NI L K+ DFGLA + + + G+ + APE
Sbjct: 147 YLH--AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPE 204
Query: 275 YVM---TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA-DKRKLY 330
+ + +SDVYS+G+VL E++TG + +Q + R Y + D KLY
Sbjct: 205 VIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-NRDQIIFMVGRGYASPDLSKLY 263
Query: 331 QIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQ 378
+ + + +L +C+ + + RP +++ + LQ
Sbjct: 264 K------------NCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 123/292 (42%), Gaps = 32/292 (10%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N + LG G FG V +E K + + VAVK LK +E ++E+
Sbjct: 39 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 153 LGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI---------PLPWSNR 202
+ L H N+V L+G C L++ E+ G L N L R+ PL +
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
+ + A+G+AFL S+ I+RD N+LL + + AK+ DFGLA+ V
Sbjct: 155 LHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 212
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
+ APE + T +SDV+S+G++L EI S+ G
Sbjct: 213 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLNPYPG----------- 257
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+ K Y++V ++ + + + C + +P RP+ ++ L
Sbjct: 258 ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 309
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 18 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L++ E MTRG L+++L R++ P S I++A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 131
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++RD N ++ ++ K+ DFG+ + + D + +
Sbjct: 132 IADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 189
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ +PE + G T+ SDV+SFGVVL EI T L Q L++++
Sbjct: 190 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQV 234
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
L +++ L L+ + +L C +PK RPS E++
Sbjct: 235 LRFVMEGGL-LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 133/286 (46%), Gaps = 52/286 (18%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL---FRRTIPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++GSL + L + + LP + +A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 124 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK- 180
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
+ APE + G T KSDV+SFG++L E+ T R G N R+
Sbjct: 181 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV----PYPGMVN-----REV 224
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
L + Y++ P + + + L C +DP+ RP+ +
Sbjct: 225 LDQVERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 102/205 (49%), Gaps = 20/205 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V W+ A VAVK++KP G ++AE + + L H
Sbjct: 23 LGAGQFGEV---WM-------ATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDK 71
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR---RTIPLPWSNRIKIALGAAKGLAFLH 217
LVKL + + ++ EFM +GSL + L PLP I + A+G+AF+
Sbjct: 72 LVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE 128
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM 277
+ I+RD + +NIL+ + K++DFGLA+ + T + APE +
Sbjct: 129 QRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAIN 185
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRR 302
G T KSDV+SFG++L+EI+T R
Sbjct: 186 FGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 133/286 (46%), Gaps = 52/286 (18%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL---FRRTIPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++GSL + L + + LP + +A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 124 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
+ APE + G T KSDV+SFG++L E+ T R G N R+
Sbjct: 181 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV----PYPGMVN-----REV 224
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
L + Y++ P + + + L C +DP+ RP+ +
Sbjct: 225 LDQVERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 123/292 (42%), Gaps = 32/292 (10%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N + LG G FG V +E K + + VAVK LK +E ++E+
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 153 LGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI---------PLPWSNR 202
+ L H N+V L+G C L++ E+ G L N L R+ PL +
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
+ + A+G+AFL S+ I+RD N+LL + + AK+ DFGLA+ V
Sbjct: 163 LHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 220
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
+ APE + T +SDV+S+G++L EI S+ G
Sbjct: 221 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLNPYPG----------- 265
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+ K Y++V ++ + + + C + +P RP+ ++ L
Sbjct: 266 ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 317
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 133/286 (46%), Gaps = 52/286 (18%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL---FRRTIPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++GSL + L + + LP + +A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 124 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
+ APE + G T KSDV+SFG++L E+ T R G N R+
Sbjct: 181 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV----PYPGMVN-----REV 224
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
L + Y++ P + + + L C +DP+ RP+ +
Sbjct: 225 LDQVERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 133/286 (46%), Gaps = 52/286 (18%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 10 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 57
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL---FRRTIPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++GSL + L + + LP + +A
Sbjct: 58 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 114
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 115 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 171
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
+ APE + G T KSDV+SFG++L E+ T R G N R+
Sbjct: 172 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV----PYPGMVN-----REV 215
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
L + Y++ P + + + L C +DP+ RP+ +
Sbjct: 216 LDQVERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERPTFE 254
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 112/252 (44%), Gaps = 26/252 (10%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 2 DPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTA 55
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 183 RGSLENHL-FRRTIPLPW--------------SNRIKIALGAAKGLAFLHGGSEPVIYRD 227
G+L +L +R +P+ + I + AKG+ FL S I+RD
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRD 173
Query: 228 FKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDV 287
NILL + K+ DFGLA+ + + APE + T +SDV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 288 YSFGVVLLEILT 299
+SFGV+L EI +
Sbjct: 234 WSFGVLLWEIFS 245
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 133/286 (46%), Gaps = 52/286 (18%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 8 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 55
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL---FRRTIPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++GSL + L + + LP + +A
Sbjct: 56 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 112
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 113 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 169
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
+ APE + G T KSDV+SFG++L E+ T R G N R+
Sbjct: 170 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY----PGMVN-----REV 213
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
L + Y++ P + + + L C +DP+ RP+ +
Sbjct: 214 LDQVERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERPTFE 252
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 27 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L++ E MTRG L+++L R++ P S I++A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++RD N ++ ++ K+ DFG+ + + D + +
Sbjct: 141 IADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 198
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ +PE + G T+ SDV+SFGVVL EI T L Q L++++
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQV 243
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
L +++ L L+ + +L C +PK RPS E++
Sbjct: 244 LRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 110/216 (50%), Gaps = 17/216 (7%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWV- 147
K+ F +LG+G FG VF +++ + A+ A+K LK L+ R+ V
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQ----LYAMKVLKKATLKV-RDRVR 72
Query: 148 --AEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
E D L +++HP +VKL Y + + +L L+ +F+ G L L + + +K
Sbjct: 73 TKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT--EEDVK 129
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L A LA H S +IYRD K NILLD E + KL+DFGL+K +K S
Sbjct: 130 FYL-AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--F 186
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GT Y APE V T +D +SFGV++ E+LTG
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V W+ A VAVK++KP G ++AE + + L H
Sbjct: 196 LGAGQFGEV---WM-------ATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDK 244
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR---RTIPLPWSNRIKIALGAAKGLAFLH 217
LVKL + + ++ EFM +GSL + L PLP I + A+G+AF+
Sbjct: 245 LVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIE 301
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY--GYAAPEY 275
+ I+RD + +NIL+ + K++DFGLA+ + T R + + APE
Sbjct: 302 QRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT---AREGAKFPIKWTAPEA 356
Query: 276 VMTGHLTSKSDVYSFGVVLLEILTGRR 302
+ G T KSDV+SFG++L+EI+T R
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 133/286 (46%), Gaps = 52/286 (18%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL---FRRTIPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++GSL + L + + LP + +A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 124 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
+ APE + G T KSDV+SFG++L E+ T R G N R+
Sbjct: 181 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV----PYPGMVN-----REV 224
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
L + Y++ P + + + L C +DP+ RP+ +
Sbjct: 225 LDQVERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 110/216 (50%), Gaps = 17/216 (7%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWV- 147
K+ F +LG+G FG VF +++ + A+ A+K LK L+ R+ V
Sbjct: 21 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQ----LYAMKVLKKATLKV-RDRVR 73
Query: 148 --AEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
E D L +++HP +VKL Y + + +L L+ +F+ G L L + + +K
Sbjct: 74 TKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT--EEDVK 130
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L A LA H S +IYRD K NILLD E + KL+DFGL+K +K S
Sbjct: 131 FYL-AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--F 187
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GT Y APE V T +D +SFGV++ E+LTG
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 110/216 (50%), Gaps = 17/216 (7%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWV- 147
K+ F +LG+G FG VF +++ + A+ A+K LK L+ R+ V
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQ----LYAMKVLKKATLKV-RDRVR 72
Query: 148 --AEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
E D L +++HP +VKL Y + + +L L+ +F+ G L L + + +K
Sbjct: 73 TKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT--EEDVK 129
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L A LA H S +IYRD K NILLD E + KL+DFGL+K +K S
Sbjct: 130 FYL-AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--F 186
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GT Y APE V T +D +SFGV++ E+LTG
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 36/220 (16%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 9 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 56
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT---IPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++GSL + L T + LP + +A
Sbjct: 57 MKKLRHEKLVQLYA-VVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQI 113
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 114 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK- 170
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRR 302
+ APE + G T KSDV+SFG++L E+ T R
Sbjct: 171 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 36/220 (16%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 232
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT---IPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++GSL + L T + LP + +A
Sbjct: 233 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQI 289
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 290 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 346
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRR 302
+ APE + G T KSDV+SFG++L E+ T R
Sbjct: 347 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 36/220 (16%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 232
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT---IPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++GSL + L T + LP + +A
Sbjct: 233 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQI 289
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 290 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 346
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRR 302
+ APE + G T KSDV+SFG++L E+ T R
Sbjct: 347 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 36/220 (16%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 12 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 59
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT---IPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++GSL + L T + LP + +A
Sbjct: 60 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQI 116
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 117 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 173
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRR 302
+ APE + G T KSDV+SFG++L E+ T R
Sbjct: 174 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 112/252 (44%), Gaps = 26/252 (10%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 2 DPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTA 55
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 183 RGSLENHL-FRRTIPLPW--------------SNRIKIALGAAKGLAFLHGGSEPVIYRD 227
G+L +L +R +P+ + I + AKG+ FL S I+RD
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRD 173
Query: 228 FKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDV 287
NILL + K+ DFGLA+ + + APE + T +SDV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 288 YSFGVVLLEILT 299
+SFGV+L EI +
Sbjct: 234 WSFGVLLWEIFS 245
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 111/251 (44%), Gaps = 25/251 (9%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + LG G FG V IE + K
Sbjct: 3 DPDELPLDEH--CERLPYDASKWEFPRDRLNLGKPLGRGAFGQV----IEADAFGIDKTA 56
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 57 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 116
Query: 183 RGSLENHL-FRRTIPLPW-------------SNRIKIALGAAKGLAFLHGGSEPVIYRDF 228
G+L +L +R +P+ + I + AKG+ FL S I+RD
Sbjct: 117 FGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRDL 174
Query: 229 KTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVY 288
NILL + K+ DFGLA+ + + APE + T +SDV+
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 289 SFGVVLLEILT 299
SFGV+L EI +
Sbjct: 235 SFGVLLWEIFS 245
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 111/248 (44%), Gaps = 22/248 (8%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + LG G FG V IE + K
Sbjct: 2 DPDELPLDEH--CERLPYDASKWEFPRDRLNLGKPLGRGAFGQV----IEADAFGIDKTA 55
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 56 TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 183 RGSLENHL-FRRTIPLPWSNR----------IKIALGAAKGLAFLHGGSEPVIYRDFKTS 231
G+L +L +R +P+ + I + AKG+ FL S I+RD
Sbjct: 116 FGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL--ASRKXIHRDLAAR 173
Query: 232 NILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFG 291
NILL + K+ DFGLA+ + + APE + T +SDV+SFG
Sbjct: 174 NILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 233
Query: 292 VVLLEILT 299
V+L EI +
Sbjct: 234 VLLWEIFS 241
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 111/248 (44%), Gaps = 22/248 (8%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + LG G FG V IE + K
Sbjct: 2 DPDELPLDEH--CERLPYDASKWEFPRDRLNLGKPLGRGAFGQV----IEADAFGIDKTA 55
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 56 TXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 183 RGSLENHL-FRRTIPLPWSNRIK----------IALGAAKGLAFLHGGSEPVIYRDFKTS 231
G+L +L +R +P+ + K + AKG+ FL S I+RD
Sbjct: 116 FGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKXIHRDLAAR 173
Query: 232 NILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFG 291
NILL + K+ DFGLA+ + + APE + T +SDV+SFG
Sbjct: 174 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 233
Query: 292 VVLLEILT 299
V+L EI +
Sbjct: 234 VLLWEIFS 241
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 15/201 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LGEG +G V+K +E G VA+K + + +E + E+ + Q P+
Sbjct: 37 LGEGSYGSVYKAIHKETGQ---------IVAIKQVPVES--DLQEIIKEISIMQQCDSPH 85
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
+VK G ++ +V E+ GS+ + + R L I KGL +LH
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+ I+RD K NILL++E +AKL+DFG+ AG D V+GT + APE +
Sbjct: 146 K--IHRDIKAGNILLNTEGHAKLADFGV--AGQLTDXMAKRNXVIGTPFWMAPEVIQEIG 201
Query: 281 LTSKSDVYSFGVVLLEILTGR 301
+D++S G+ +E+ G+
Sbjct: 202 YNCVADIWSLGITAIEMAEGK 222
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 36/220 (16%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 315
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT---IPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++GSL + L T + LP + +A
Sbjct: 316 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQI 372
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 373 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 429
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRR 302
+ APE + G T KSDV+SFG++L E+ T R
Sbjct: 430 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 52/286 (18%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL---FRRTIPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++GSL + L + + LP + +A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD +NIL+ K++DFGLA+ QG K +
Sbjct: 124 ASGMAYVERMN--YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
+ APE + G T KSDV+SFG++L E+ T R G N R+
Sbjct: 181 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV----PYPGMVN-----REV 224
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
L + Y++ P + + + L C +DP+ RP+ +
Sbjct: 225 LDQVERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 36/286 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 22 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L+V E M G L+++L R++ P I++A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++ ++RD N ++ ++ K+ DFG+ + + D + +
Sbjct: 136 IADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 193
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ APE + G T+ SD++SFGVVL EI + L Q L++++
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 238
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
L ++D L+ ++V+ L C +PK RP+ E+V +L
Sbjct: 239 LKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 112/252 (44%), Gaps = 26/252 (10%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 2 DPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTA 55
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 183 RGSLENHL-FRRTIPLPW--------------SNRIKIALGAAKGLAFLHGGSEPVIYRD 227
G+L +L +R +P+ + I + AKG+ FL S I+RD
Sbjct: 116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRD 173
Query: 228 FKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDV 287
NILL + K+ DFGLA+ + + APE + T +SDV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 288 YSFGVVLLEILT 299
+SFGV+L EI +
Sbjct: 234 WSFGVLLWEIFS 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 112/252 (44%), Gaps = 26/252 (10%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 4 DPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTA 57
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 58 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 117
Query: 183 RGSLENHL-FRRTIPLPW--------------SNRIKIALGAAKGLAFLHGGSEPVIYRD 227
G+L +L +R +P+ + I + AKG+ FL S I+RD
Sbjct: 118 FGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRD 175
Query: 228 FKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDV 287
NILL + K+ DFGLA+ + + APE + T +SDV
Sbjct: 176 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 235
Query: 288 YSFGVVLLEILT 299
+SFGV+L EI +
Sbjct: 236 WSFGVLLWEIFS 247
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 133/286 (46%), Gaps = 52/286 (18%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL---FRRTIPLPWSNRIKIALGA 209
+ ++ H LV+L + ++ +V E+M++GSL + L + + LP + +A
Sbjct: 67 MKKIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 124 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
+ APE + G T KSDV+SFG++L E+ T R G N R+
Sbjct: 181 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV----PYPGMVN-----REV 224
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
L + Y++ P + + + L C +DP+ RP+ +
Sbjct: 225 LDQVERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 118/293 (40%), Gaps = 40/293 (13%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQL-HH 158
LG G FG V +E K + +TVAVK LKP RE ++E+ L L +H
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSN----------------- 201
N+V L+G C L++ E+ G L N L R+ S
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 202 RIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVS 261
+ + AKG+AFL S+ I+RD NILL K+ DFGLA+ V
Sbjct: 163 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 262 TRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQ 321
+ APE + T +SDV+S+G+ L E+ + S P
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--------- 271
Query: 322 YLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
K Y+++ + ++ + C DP RP+ ++V+++
Sbjct: 272 ------KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 318
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 132/286 (46%), Gaps = 52/286 (18%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL---FRRTIPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++G L + L + + LP + +A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 124 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
+ APE + G T KSDV+SFG++L E+ T R G N R+
Sbjct: 181 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV----PYPGMVN-----REV 224
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
L + Y++ P + + + L C +DP+ RP+ +
Sbjct: 225 LDQVERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 118/293 (40%), Gaps = 40/293 (13%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQL-HH 158
LG G FG V +E K + +TVAVK LKP RE ++E+ L L +H
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSN----------------- 201
N+V L+G C L++ E+ G L N L R+ S
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 202 RIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVS 261
+ + AKG+AFL S+ I+RD NILL K+ DFGLA+ V
Sbjct: 147 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 262 TRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQ 321
+ APE + T +SDV+S+G+ L E+ + S P
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--------- 255
Query: 322 YLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
K Y+++ + ++ + C DP RP+ ++V+++
Sbjct: 256 ------KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 118/293 (40%), Gaps = 40/293 (13%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQL-HH 158
LG G FG V +E K + +TVAVK LKP RE ++E+ L L +H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSN----------------- 201
N+V L+G C L++ E+ G L N L R+ S
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 202 RIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVS 261
+ + AKG+AFL S+ I+RD NILL K+ DFGLA+ V
Sbjct: 170 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 262 TRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQ 321
+ APE + T +SDV+S+G+ L E+ + S P
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--------- 278
Query: 322 YLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
K Y+++ + ++ + C DP RP+ ++V+++
Sbjct: 279 ------KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 19/202 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ + VAVK+LKP G + ++ E + + L H
Sbjct: 21 LGAGQFGEVWMGYY----------NNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDK 69
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT---IPLPWSNRIKIALGAAKGLAFLH 217
LV+L ++ ++ E+M +GSL + L + LP I + A+G+A++
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE 127
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM 277
+ I+RD + +N+L+ K++DFGLA+ + T + APE +
Sbjct: 128 RKN--YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAIN 184
Query: 278 TGHLTSKSDVYSFGVVLLEILT 299
G T KSDV+SFG++L EI+T
Sbjct: 185 FGCFTIKSDVWSFGILLYEIVT 206
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 36/220 (16%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 232
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT---IPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++GSL + L T + LP + +A
Sbjct: 233 MKKLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQI 289
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 290 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 346
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRR 302
+ APE + G T KSDV+SFG++L E+ T R
Sbjct: 347 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 36/286 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L+V E M G L+++L R++ P I++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++ ++RD N ++ ++ K+ DFG+ + + D + +
Sbjct: 139 IADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ APE + G T+ SD++SFGVVL EI + L Q L++++
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 241
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
L ++D L+ ++V+ L C +PK RP+ E+V +L
Sbjct: 242 LKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 118/293 (40%), Gaps = 40/293 (13%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQL-HH 158
LG G FG V +E K + +TVAVK LKP RE ++E+ L L +H
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSN----------------- 201
N+V L+G C L++ E+ G L N L R+ S
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 202 RIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVS 261
+ + AKG+AFL S+ I+RD NILL K+ DFGLA+ V
Sbjct: 165 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 262 TRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQ 321
+ APE + T +SDV+S+G+ L E+ + S P
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--------- 273
Query: 322 YLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
K Y+++ + ++ + C DP RP+ ++V+++
Sbjct: 274 ------KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 320
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 112/252 (44%), Gaps = 26/252 (10%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 39 DPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTA 92
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 93 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 152
Query: 183 RGSLENHL-FRRTIPLPW--------------SNRIKIALGAAKGLAFLHGGSEPVIYRD 227
G+L +L +R +P+ + I + AKG+ FL S I+RD
Sbjct: 153 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL--ASRKCIHRD 210
Query: 228 FKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDV 287
NILL + K+ DFGLA+ + + APE + T +SDV
Sbjct: 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 270
Query: 288 YSFGVVLLEILT 299
+SFGV+L EI +
Sbjct: 271 WSFGVLLWEIFS 282
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 118/293 (40%), Gaps = 40/293 (13%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQL-HH 158
LG G FG V +E K + +TVAVK LKP RE ++E+ L L +H
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSN----------------- 201
N+V L+G C L++ E+ G L N L R+ S
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 202 RIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVS 261
+ + AKG+AFL S+ I+RD NILL K+ DFGLA+ V
Sbjct: 170 LLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 262 TRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQ 321
+ APE + T +SDV+S+G+ L E+ + S P
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--------- 278
Query: 322 YLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
K Y+++ + ++ + C DP RP+ ++V+++
Sbjct: 279 ------KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLI 325
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 20 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L++ E MTRG L+++L R++ P S I++A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++RD N ++ ++ K+ DFG+ + + D + +
Sbjct: 134 IADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ +PE + G T+ SDV+SFGVVL EI T L Q L++++
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQV 236
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
L +++ L L+ + +L C +PK RPS E++
Sbjct: 237 LRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G T V T
Sbjct: 113 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G T V T
Sbjct: 112 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 132/281 (46%), Gaps = 32/281 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 33 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL--FRRTI-------PLPWSNRIKIALGAA 210
++V+L+G + L++ E MTRG L+++L R + P S I++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
G+A+L+ ++RD N ++ ++ K+ DFG+ + + D + + +
Sbjct: 149 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 206
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLY 330
+PE + G T+ SDV+SFGVVL EI T L Q L++++ L
Sbjct: 207 MSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLR 251
Query: 331 QIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
+++ L L+ + +L C +PK RPS E++
Sbjct: 252 FVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G T V T
Sbjct: 113 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 167 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 27 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L++ E MTRG L+++L R++ P S I++A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++RD N ++ ++ K+ DFG+ + + D + +
Sbjct: 141 IADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 198
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ +PE + G T+ SDV+SFGVVL EI T L Q L++++
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQV 243
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
L +++ L L+ + +L C +PK RPS E++
Sbjct: 244 LRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G T V T
Sbjct: 112 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 33 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L++ E MTRG L+++L R++ P S I++A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 146
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++RD N ++ ++ K+ DFG+ + + D + +
Sbjct: 147 IADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 204
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ +PE + G T+ SDV+SFGVVL EI T L Q L++++
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQV 249
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
L +++ L L+ + +L C +PK RPS E++
Sbjct: 250 LRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 8 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 56
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G T V T
Sbjct: 117 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 170
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 132/286 (46%), Gaps = 52/286 (18%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 66
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL---FRRTIPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++G L + L + + LP + +A
Sbjct: 67 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQI 123
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 124 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 180
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
+ APE + G T KSDV+SFG++L E+ T R G N R+
Sbjct: 181 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV----PYPGMVN-----REV 224
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
L + Y++ P + + + L C +DP+ RP+ +
Sbjct: 225 LDQVERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 132/281 (46%), Gaps = 32/281 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 23 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHL--FRRTI-------PLPWSNRIKIALGAA 210
++V+L+G + L++ E MTRG L+++L R + P S I++A A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
G+A+L+ ++RD N ++ ++ K+ DFG+ + + D + + +
Sbjct: 139 DGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 196
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLY 330
+PE + G T+ SDV+SFGVVL EI T L Q L++++ L
Sbjct: 197 MSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQVLR 241
Query: 331 QIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
+++ L L+ + +L C +PK RPS E++
Sbjct: 242 FVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 23/204 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V+ G+ + VAVK+LKP G + ++ E + + L H
Sbjct: 20 LGAGQFGEVWMGYY----------NNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDK 68
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT---IPLPWSNRIKIALGAAKGLAFLH 217
LV+L +++ ++ EFM +GSL + L + LP I + A+G+A++
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE 126
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY--GYAAPEY 275
+ I+RD + +N+L+ K++DFGLA+ + T R + + APE
Sbjct: 127 --RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT---AREGAKFPIKWTAPEA 181
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ G T KS+V+SFG++L EI+T
Sbjct: 182 INFGCFTIKSNVWSFGILLYEIVT 205
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 26 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L++ E MTRG L+++L R++ P S I++A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++RD N ++ ++ K+ DFG+ + + D + +
Sbjct: 140 IADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ +PE + G T+ SDV+SFGVVL EI T L Q L++++
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQV 242
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
L +++ L L+ + +L C +PK RPS E++
Sbjct: 243 LRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G T V T
Sbjct: 113 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G T V T
Sbjct: 120 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 173
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 174 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 5 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 53
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G T V T
Sbjct: 114 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 167
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 24 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 79
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L++ E MTRG L+++L R++ P S I++A
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 137
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++RD N ++ ++ K+ DFG+ + + D + +
Sbjct: 138 IADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ +PE + G T+ SDV+SFGVVL EI T L Q L++++
Sbjct: 196 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQV 240
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
L +++ L L+ + +L C +PK RPS E++
Sbjct: 241 LRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 26 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L++ E MTRG L+++L R++ P S I++A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++RD N ++ ++ K+ DFG+ + + D + +
Sbjct: 140 IADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ +PE + G T+ SDV+SFGVVL EI T L Q L++++
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQV 242
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
L +++ L L+ + +L C +PK RPS E++
Sbjct: 243 LRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G T V T
Sbjct: 120 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 173
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 174 LWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 36/220 (16%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 63
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT---IPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M +GSL + L T + LP + ++
Sbjct: 64 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP--QLVDMSAQI 120
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 121 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIK- 177
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRR 302
+ APE + G T KSDV+SFG++L E+ T R
Sbjct: 178 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 36/220 (16%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GTMSPEAFLQEAQV 63
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT---IPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M +GSL + L T + LP + ++
Sbjct: 64 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP--QLVDMSAQI 120
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGLA+ QG K +
Sbjct: 121 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 177
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRR 302
+ APE + G T KSDV+SFG++L E+ T R
Sbjct: 178 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 11/202 (5%)
Query: 100 ILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQLH 157
+LG G FG V+KG W+ E T I VA+K L + G + + E++ E + +
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETV------KIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
HP+LV+L+G C+ +L V + M G L ++ + + + AKG+ +L
Sbjct: 99 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 157
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM 277
+++RD N+L+ S + K++DFGLA+ +K + + + A E +
Sbjct: 158 --ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 278 TGHLTSKSDVYSFGVVLLEILT 299
T +SDV+S+GV + E++T
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMT 237
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 11/202 (5%)
Query: 100 ILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQLH 157
+LG G FG V+KG W+ E T I VA+K L + G + + E++ E + +
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETV------KIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
HP+LV+L+G C+ +L V + M G L ++ + + + AKG+ +L
Sbjct: 76 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 134
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM 277
+++RD N+L+ S + K++DFGLA+ +K + + + A E +
Sbjct: 135 --ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 278 TGHLTSKSDVYSFGVVLLEILT 299
T +SDV+S+GV + E++T
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMT 214
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 55 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 110
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L++ E MTRG L+++L R++ P S I++A
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 168
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++RD N ++ ++ K+ DFG+ + + D + +
Sbjct: 169 IADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 226
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ +PE + G T+ SDV+SFGVVL EI T L Q L++++
Sbjct: 227 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQV 271
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
L +++ L L+ + +L C +PK RPS E++
Sbjct: 272 LRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG--HREWVAEVDFLGQLHH 158
LGE FG V+KG + G AP + VA+K+LK D +G E+ E +L H
Sbjct: 34 LGEDRFGKVYKGHL--FGPAPGEQTQA--VAIKTLK-DKAEGPLREEFRHEAMLRARLQH 88
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT---------------IPLPWSNRI 203
PN+V L+G +D +++ + + G L L R+ L + +
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
+ A G+ +L S V+++D T N+L+ + N K+SD GL + D +
Sbjct: 149 HLVAQIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ + APE +M G + SD++S+GVVL E+ +
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 119/272 (43%), Gaps = 31/272 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G FG VFKG +N T I + + + +Q E+ L Q P
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQ------QEITVLSQCDSPY 81
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
+ K G ++D + ++ E++ GS + L PL + I KGL +LH S
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLH--S 137
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
E I+RD K +N+LL KL+DFG+ AG D VGT + APE +
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNXFVGTPFWMAPEVIKQSA 195
Query: 281 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 340
SK+D++S G+ +E+ G + P L+ P LE N
Sbjct: 196 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGN 242
Query: 341 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
YS + + + CL+++P RP+ E++K
Sbjct: 243 YS----KPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 36/221 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYE--------FMTRGSLENHLFRRTIPLPWSN 201
+ L +L+HPN+VKL+ +++ LV+E FM +L IPLP
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTG------IPLPLIK 105
Query: 202 RIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVS 261
L +GLAF H S V++RD K N+L+++E KL+DFGLA+A G
Sbjct: 106 SYLFQL--LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTY 159
Query: 262 TRVVGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
T V T Y APE ++ + ++ D++S G + E++T R
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 14/205 (6%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQL 156
D LG G FG V +G I VA+K LK + E + E + QL
Sbjct: 15 DIELGCGNFGSVRQGVYRMRKKQ-------IDVAIKVLKQGTEKADTEEMMREAQIMHQL 67
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFL 216
+P +V+LIG C + + +LV E G L L + +P SN ++ + G+ +L
Sbjct: 68 DNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 126
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY--GYAAPE 274
+ ++RD N+LL + + AK+SDFGL+KA D ++ + R G + + APE
Sbjct: 127 E--EKNFVHRDLAARNVLLVNRHYAKISDFGLSKA-LGADDSYYTARSAGKWPLKWYAPE 183
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILT 299
+ +S+SDV+S+GV + E L+
Sbjct: 184 CINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GL+F H S V++RD K N+L+++E KL+DFGLA+A G T V T
Sbjct: 113 --LQGLSFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 34/225 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
+GEG FG VF+ G P +P + VAVK LK + ++ E + + +P
Sbjct: 55 IGEGAFGRVFQA--RAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI------------------------ 195
N+VKL+G C L++E+M G L F R++
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNE--FLRSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 196 -PLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQ 254
PL + ++ IA A G+A+L ++RD T N L+ K++DFGL++
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 255 GDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
D + PE + T++SDV+++GVVL EI +
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 112/216 (51%), Gaps = 26/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 6 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 54
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT---IPLPWSNRIKIA 206
+ L +L+HPN+VKL+ +++ LV+EF++ L++ + IPLP
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQ 113
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG 266
L +GLAF H S V++RD K N+L+++E KL+DFGLA+A +T+ V
Sbjct: 114 L--LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-- 167
Query: 267 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
T Y APE ++ + ++ D++S G + E++T R
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 36/286 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 24 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L+V E M G L+++L R++ P I++A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++ ++RD N ++ ++ K+ DFG+ + + D + +
Sbjct: 138 IADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ APE + G T+ SD++SFGVVL EI + L Q L++++
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 240
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
L ++D L+ ++V+ L C +PK RP+ E+V +L
Sbjct: 241 LKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 119/272 (43%), Gaps = 31/272 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G FG VFKG +N T I + + + +Q E+ L Q P
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQ------QEITVLSQCDSPY 66
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
+ K G ++D + ++ E++ GS + L PL + I KGL +LH S
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLH--S 122
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
E I+RD K +N+LL KL+DFG+ AG D VGT + APE +
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNXFVGTPFWMAPEVIKQSA 180
Query: 281 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 340
SK+D++S G+ +E+ G + P L+ P LE N
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGN 227
Query: 341 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
YS + + + CL+++P RP+ E++K
Sbjct: 228 YS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 119/272 (43%), Gaps = 31/272 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G FG VFKG +N T I + + + +Q E+ L Q P
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQ------QEITVLSQCDSPY 66
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
+ K G ++D + ++ E++ GS + L PL + I KGL +LH S
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLH--S 122
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
E I+RD K +N+LL KL+DFG+ AG D VGT + APE +
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNTFVGTPFWMAPEVIKQSA 180
Query: 281 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 340
SK+D++S G+ +E+ G + P L+ P LE N
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGN 227
Query: 341 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
YS + + + CL+++P RP+ E++K
Sbjct: 228 YS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 30/218 (13%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 5 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 53
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-----IPLPWSNRIK 204
+ L +L+HPN+VKL+ +++ LV+EF+ S++ F IPLP
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYL 110
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +GLAF H S V++RD K N+L+++E KL+DFGLA+A +T+ V
Sbjct: 111 FQL--LQGLAFCH--SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 265 VGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
T Y APE ++ + ++ D++S G + E++T R
Sbjct: 167 --TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 109/218 (50%), Gaps = 30/218 (13%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 7 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 55
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-----IPLPWSNRIK 204
+ L +L+HPN+VKL+ +++ LV+EF+ S++ F IPLP
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYL 112
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +GLAF H S V++RD K N+L+++E KL+DFGLA+A G
Sbjct: 113 FQL--LQGLAFCH--SHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHE 166
Query: 265 VGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
V T Y APE ++ + ++ D++S G + E++T R
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
NF+ +GEG +G V+K + G A + + + ++ E+ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-------EISLL 56
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIALGAAK 211
+L+HPN+VKL+ +++ LV+EF+ + + IPLP L +
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQ 114
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
GLAF H S V++RD K N+L+++E KL+DFGLA+A G T V T Y
Sbjct: 115 GLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 170
Query: 272 APEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
APE ++ + ++ D++S G + E++T R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
NF+ +GEG +G V+K + G A + + + ++ E+ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-------EISLL 55
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIALGAAK 211
+L+HPN+VKL+ +++ LV+EF+ + + IPLP L +
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL--LQ 113
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
GLAF H S V++RD K N+L+++E KL+DFGLA+A G T V T Y
Sbjct: 114 GLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 169
Query: 272 APEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
APE ++ + ++ D++S G + E++T R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 26/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 7 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 55
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT---IPLPWSNRIKIA 206
+ L +L+HPN+VKL+ +++ LV+EF++ L++ + IPLP
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQ 114
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG 266
L +GLAF H S V++RD K N+L+++E KL+DFGLA+A G V
Sbjct: 115 L--LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV 168
Query: 267 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
T Y APE ++ + ++ D++S G + E++T R
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 122/296 (41%), Gaps = 36/296 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N + LG G FG V +E K + + VAVK LK +E ++E+
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 153 LGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALG--- 208
+ L H N+V L+G C L++ E+ G L N L R++ L IA
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 209 ----------AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKT 258
A+G+AFL S+ I+RD N+LL + + AK+ DFGLA+
Sbjct: 163 TRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 220
Query: 259 HVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAW 318
V + APE + T +SDV+S+G++L EI S+ G
Sbjct: 221 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLNPYPG------- 269
Query: 319 ARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+ K Y++V ++ + + + C + +P RP+ ++ L
Sbjct: 270 ----ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 321
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 36/286 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L+V E M G L+++L R++ P I++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++ ++RD N ++ ++ K+ DFG+ + + D + +
Sbjct: 139 IADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ APE + G T+ SD++SFGVVL EI + L Q L++++
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 241
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
L ++D L+ ++V+ L C +PK RP+ E+V +L
Sbjct: 242 LKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 133/286 (46%), Gaps = 52/286 (18%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+ R + LG+G FG V+ G W NGT VA+K+LKP G ++ E
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLKP-GNMSPEAFLQEAQV 233
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL---FRRTIPLPWSNRIKIALGA 209
+ +L H LV+L + ++ +V E+M++GSL + L + + LP + +A
Sbjct: 234 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQI 290
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-------AGPQGDKTHVST 262
A G+A++ + ++RD + +NIL+ K++DFGL + QG K +
Sbjct: 291 ASGMAYVERMN--YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIK- 347
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
+ APE + G T KSDV+SFG++L E+ T R P G N R+
Sbjct: 348 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV---PYP-GMVN-----REV 391
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
L + Y++ P + + + L C +DP+ RP+ +
Sbjct: 392 LDQVERGYRMPCPP-------ECPESLHDLMCQCWRKDPEERPTFE 430
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG--HREWVAEVDFLGQLHH 158
LGE FG V+KG + G AP + VA+K+LK D +G E+ E +L H
Sbjct: 17 LGEDRFGKVYKGHL--FGPAPGEQTQA--VAIKTLK-DKAEGPLREEFRHEAMLRARLQH 71
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT---------------IPLPWSNRI 203
PN+V L+G +D +++ + + G L L R+ L + +
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
+ A G+ +L S V+++D T N+L+ + N K+SD GL + D +
Sbjct: 132 HLVAQIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ + APE +M G + SD++S+GVVL E+ +
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 132/286 (46%), Gaps = 36/286 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L+V E M G L+++L R++ P I++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++ ++RD N ++ ++ K+ DFG+ + + D + +
Sbjct: 139 IADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ APE + G T+ SD++SFGVVL EI + L Q L++++
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 241
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
L ++D L+ ++V+ L C +P RP+ E+V +L
Sbjct: 242 LKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 122/296 (41%), Gaps = 36/296 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N + LG G FG V +E K + + VAVK LK +E ++E+
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 153 LGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALG--- 208
+ L H N+V L+G C L++ E+ G L N L R++ L IA
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 209 ----------AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKT 258
A+G+AFL S+ I+RD N+LL + + AK+ DFGLA+
Sbjct: 163 TRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 220
Query: 259 HVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAW 318
V + APE + T +SDV+S+G++L EI S+ G
Sbjct: 221 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLNPYPG------- 269
Query: 319 ARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+ K Y++V ++ + + + C + +P RP+ ++ L
Sbjct: 270 ----ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 321
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 124/287 (43%), Gaps = 37/287 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAEVD 151
F +LG+G FG V + +++ + GS + VAVK LK D + E++ E
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQ------EDGSFVKVAVKMLKADIIASSDIEEFLREAA 77
Query: 152 FLGQLHHPNLVKLIGYCIEDDQR------LLVYEFMTRGSLENHLFRRTI-----PLPWS 200
+ + HP++ KL+G + + +++ FM G L L I LP
Sbjct: 78 CMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQ 137
Query: 201 NRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV 260
++ + A G+ +L S I+RD N +L + ++DFGL++ GD
Sbjct: 138 TLVRFMVDIACGMEYL--SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQ 195
Query: 261 STRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 320
+ A E + T SDV++FGV + EI+T ++ +G +N A
Sbjct: 196 GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQT----PYAGIEN--AEIY 249
Query: 321 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSM 367
YL +L Q + +++V L Y C S DPK RPS
Sbjct: 250 NYLIGGNRLKQ----------PPECMEEVYDLMYQCWSADPKQRPSF 286
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 26/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT---IPLPWSNRIKIA 206
+ L +L+HPN+VKL+ +++ LV+EF+ + L++ + IPLP
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQ 111
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG 266
L +GLAF H S V++RD K N+L+++E KL+DFGLA+A G V
Sbjct: 112 L--LQGLAFCH--SHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV 165
Query: 267 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
T Y APE ++ + ++ D++S G + E++T R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 132/283 (46%), Gaps = 36/283 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDFLGQLHHP 159
LG+G FG V++G G +P + VA+K++ R E++ E + + +
Sbjct: 20 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L++ E MTRG L+++L R++ P S I++A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++RD N + ++ K+ DFG+ + + D + +
Sbjct: 134 IADGMAYLNANK--FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ +PE + G T+ SDV+SFGVVL EI T L Q L++++
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQPYQGLSNEQV 236
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
L +++ L L+ + +L C +PK RPS E++
Sbjct: 237 LRFVMEGGL-LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 24/207 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAEVDFLGQL 156
+GEG +G V+K AK G VA+K ++ D G+ + E+ L +L
Sbjct: 29 VGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL-GAAKGLAF 215
HHPN+V LI + LV+EFM + L+ L L ++IKI L +G+A
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ-DSQIKIYLYQLLRGVAH 134
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEY 275
H +++RD K N+L++S+ KL+DFGLA+A G T V T Y AP+
Sbjct: 135 CH--QHRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDV 190
Query: 276 VMTGHLTSKS-DVYSFGVVLLEILTGR 301
+M S S D++S G + E++TG+
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 24/207 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAEVDFLGQL 156
+GEG +G V+K AK G VA+K ++ D G+ + E+ L +L
Sbjct: 29 VGEGTYGVVYK----------AKDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL-GAAKGLAF 215
HHPN+V LI + LV+EFM + L+ L L ++IKI L +G+A
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQ-DSQIKIYLYQLLRGVAH 134
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEY 275
H +++RD K N+L++S+ KL+DFGLA+A G T V T Y AP+
Sbjct: 135 CH--QHRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDV 190
Query: 276 VMTGHLTSKS-DVYSFGVVLLEILTGR 301
+M S S D++S G + E++TG+
Sbjct: 191 LMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 123/298 (41%), Gaps = 38/298 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N + LG G FG V +E K + + VAVK LK +E ++E+
Sbjct: 47 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 153 LGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP--------------- 196
+ L H N+V L+G C L++ E+ G L N L R+ P
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 197 LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD 256
L + + + A+G+AFL S+ I+RD N+LL + + AK+ DFGLA+
Sbjct: 163 LSSRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 220
Query: 257 KTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLV 316
V + APE + T +SDV+S+G++L EI S+ G
Sbjct: 221 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLNPYPG----- 271
Query: 317 AWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
+ K Y++V ++ + + + C + +P RP+ ++ L
Sbjct: 272 ------ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 323
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 7 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 55
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + + IPLP L
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQL 115
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 116 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 169
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 120/272 (44%), Gaps = 31/272 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G FG VFKG +N T I + + + +Q E+ L Q P
Sbjct: 35 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQ------QEITVLSQCDSPY 86
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
+ K G ++D + ++ E++ GS + L PL + I KGL +LH S
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLH--S 142
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
E I+RD K +N+LL KL+DFG+ AG D VGT + APE +
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGV--AGQLTDTQIKRNTFVGTPFWMAPEVIKQSA 200
Query: 281 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 340
SK+D++S G+ +E+ G + P +L K P LE N
Sbjct: 201 YDSKADIWSLGITAIELARGEPPHSELHP--------MKVLFLIPKNN-----PPTLEGN 247
Query: 341 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
YS + + + CL+++P RP+ E++K
Sbjct: 248 YS----KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 113 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 166
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 113 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 166
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 113 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 166
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 112 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 165
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 5 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 53
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 114 --LQGLAFCH--SHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 167
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 112 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 165
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 113 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 166
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 5 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 53
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 114 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 167
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 6 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 54
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 114
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 115 --LQGLAFCH--SHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 168
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 7 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 55
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 116 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 169
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 6 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 54
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 114
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 115 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 168
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 6 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 54
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 114
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 115 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 168
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
LG GGFGYV + WI ++ +G VA+K + + +RE W E+ + +L+HP
Sbjct: 23 LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 160 NLVKL------IGYCIEDDQRLLVYEFMTRGSLENHL--FRRTIPLPWSNRIKIALGAAK 211
N+V + +D LL E+ G L +L F L + +
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLD---SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
L +LH +I+RD K NI+L K+ D G AK QG+ + T VGT
Sbjct: 134 ALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTL 188
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRR 302
Y APE + T D +SFG + E +TG R
Sbjct: 189 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
LG GGFGYV + WI ++ +G VA+K + + +RE W E+ + +L+HP
Sbjct: 22 LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 160 NLVKL------IGYCIEDDQRLLVYEFMTRGSLENHL--FRRTIPLPWSNRIKIALGAAK 211
N+V + +D LL E+ G L +L F L + +
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLD---SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
L +LH +I+RD K NI+L K+ D G AK QG+ + T VGT
Sbjct: 133 ALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTL 187
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRR 302
Y APE + T D +SFG + E +TG R
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 5 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 53
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 114 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 167
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 8 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 56
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 117 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 170
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 7 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 55
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRG--SLENHLFRRTIPLPWSNRIKIAL 207
+ L +L+HPN+VKL+ +++ LV+EF+ + + IPLP L
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+GLAF H S V++RD K N+L+++E KL+DFGLA+A G V T
Sbjct: 116 --LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 169
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE ++ + ++ D++S G + E++T R
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK---PDGLQGHREWVAEVDFLGQLH 157
+G G FG VF G + + T VAVKS + P L+ +++ E L Q
Sbjct: 122 IGRGNFGEVFSGRLRADNT---------LVAVKSCRETLPPDLKA--KFLQEARILKQYS 170
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
HPN+V+LIG C + +V E + G L L +++ AA G+ +L
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE 230
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM 277
S+ I+RD N L+ + K+SDFG+++ G + APE +
Sbjct: 231 --SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALN 288
Query: 278 TGHLTSKSDVYSFGVVLLEILT 299
G +S+SDV+SFG++L E +
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 116/278 (41%), Gaps = 40/278 (14%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW---VAEVDFLGQLH 157
+G G FG V+ N VA+K + G Q + +W + EV FL +L
Sbjct: 62 IGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
HPN ++ G + + LV E+ GS + L PL + GA +GLA+LH
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM 277
S +I+RD K NILL KL DFG A + VGT + APE ++
Sbjct: 172 --SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVIL 223
Query: 278 T---GHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVD 334
G K DV+S G+ +E+ ++K P N ++ LY I
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIEL------AERKPPLFNMNAMS----------ALYHIAQ 267
Query: 335 PRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
S + +CL + P+ RP+ + ++K
Sbjct: 268 NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 116/278 (41%), Gaps = 40/278 (14%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW---VAEVDFLGQLH 157
+G G FG V+ N VA+K + G Q + +W + EV FL +L
Sbjct: 23 IGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
HPN ++ G + + LV E+ GS + L PL + GA +GLA+LH
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM 277
S +I+RD K NILL KL DFG A + VGT + APE ++
Sbjct: 133 --SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVIL 184
Query: 278 T---GHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVD 334
G K DV+S G+ +E+ ++K P N ++ LY I
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIEL------AERKPPLFNMNAMS----------ALYHIAQ 228
Query: 335 PRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
S + +CL + P+ RP+ + ++K
Sbjct: 229 NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK---PDGLQGHREWVAEVDFLGQLH 157
+G G FG VF G + + T VAVKS + P L+ +++ E L Q
Sbjct: 122 IGRGNFGEVFSGRLRADNT---------LVAVKSCRETLPPDLKA--KFLQEARILKQYS 170
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
HPN+V+LIG C + +V E + G L L +++ AA G+ +L
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE 230
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM 277
S+ I+RD N L+ + K+SDFG+++ G + APE +
Sbjct: 231 --SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 278 TGHLTSKSDVYSFGVVLLEILT 299
G +S+SDV+SFG++L E +
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 21/219 (9%)
Query: 90 SATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVA 148
S++ F+ LG G + V+KG N T +G+ VA+K +K D +G +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGL---NKT------TGVYVALKEVKLDSEEGTPSTAIR 52
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI---PLPWS-NRIK 204
E+ + +L H N+V+L +++ LV+EFM L+ ++ RT+ P N +K
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 205 -IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
+GLAF H +++RD K N+L++ KL DFGLA+A G + +
Sbjct: 112 YFQWQLLQGLAFCH--ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFSS 167
Query: 264 VVGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
V T Y AP+ +M S S D++S G +L E++TG+
Sbjct: 168 EVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 11/199 (5%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
++VKLIG I ++ ++ E T G L + L R L ++ I A + LA+L
Sbjct: 72 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE-- 128
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
S+ ++RD N+L+ S KL DFGL++ S + + APE +
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI-KWMAPESINFR 187
Query: 280 HLTSKSDVYSFGVVLLEIL 298
TS SDV+ FGV + EIL
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 123/305 (40%), Gaps = 45/305 (14%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N + LG G FG V +E K + + VAVK LK +E ++E+
Sbjct: 32 NLQFGKTLGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 153 LGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI---------------- 195
+ L H N+V L+G C L++ E+ G L N L R+
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL 147
Query: 196 ------PLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA 249
PL + + + A+G+AFL S+ I+RD N+LL + + AK+ DFGLA
Sbjct: 148 DKEDGRPLELRDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 205
Query: 250 KAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRP 309
+ V + APE + T +SDV+S+G++L EI S+
Sbjct: 206 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLNPY 261
Query: 310 SGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDE 369
G + K Y++V ++ + + + C + +P RP+ +
Sbjct: 262 PG-----------ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQ 310
Query: 370 VVKVL 374
+ L
Sbjct: 311 ICSFL 315
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 123/307 (40%), Gaps = 49/307 (15%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTA--PAKPGSGITVAVKSLKPDGLQGHRE-WVAEV 150
N +LG G FG V N TA +K G I VAVK LK RE ++E+
Sbjct: 46 NLEFGKVLGSGAFGKVM------NATAYGISKTGVSIQVAVKMLKEKADSSEREALMSEL 99
Query: 151 DFLGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIP------------- 196
+ QL H N+V L+G C L++E+ G L N+L +
Sbjct: 100 KMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKR 159
Query: 197 ---------LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFG 247
L + + + A AKG+ FL S ++RD N+L+ K+ DFG
Sbjct: 160 LEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS--CVHRDLAARNVLVTHGKVVKICDFG 217
Query: 248 LAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKK 307
LA+ V + APE + G T KSDV+S+G++L EI S+
Sbjct: 218 LARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF----SLGVN 273
Query: 308 RPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSM 367
G + Y+++ +++ +++ + +C + D + RPS
Sbjct: 274 PYPG-----------IPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSF 322
Query: 368 DEVVKVL 374
+ L
Sbjct: 323 PNLTSFL 329
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 36/221 (16%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD----GLQGHREWVAE 149
NF+ +GEG +G V+K +G VA+K ++ D G+ + E
Sbjct: 7 NFQKVEKIGEGTYGVVYKA---------RNKLTGEVVALKKIRLDTETEGVPSTA--IRE 55
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYE--------FMTRGSLENHLFRRTIPLPWSN 201
+ L +L+HPN+VKL+ +++ LV+E FM +L IPLP
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTG------IPLPLIK 109
Query: 202 RIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVS 261
L +GLAF H S V++RD K N+L+++E KL+DFGLA+A G
Sbjct: 110 SYLFQL--LQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTY 163
Query: 262 TRVVGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
V T Y APE ++ + ++ D++S G + E++T R
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
++VKLIG I ++ ++ E T G L + L R L ++ I A + LA+L
Sbjct: 452 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE-- 508
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV-STRVVGTYGYAAPEYVMT 278
S+ ++RD N+L+ S KL DFGL++ D T+ +++ + APE +
Sbjct: 509 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINF 566
Query: 279 GHLTSKSDVYSFGVVLLEIL 298
TS SDV+ FGV + EIL
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
++VKLIG I ++ ++ E T G L + L R L ++ I A + LA+L
Sbjct: 72 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 128
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV-STRVVGTYGYAAPEYVMT 278
S+ ++RD N+L+ S KL DFGL++ D T+ +++ + APE +
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINF 186
Query: 279 GHLTSKSDVYSFGVVLLEIL 298
TS SDV+ FGV + EIL
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 15 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
++VKLIG I ++ ++ E T G L + L R L ++ I A + LA+L
Sbjct: 69 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 125
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV-STRVVGTYGYAAPEYVMT 278
S+ ++RD N+L+ S KL DFGL++ D T+ +++ + APE +
Sbjct: 126 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINF 183
Query: 279 GHLTSKSDVYSFGVVLLEIL 298
TS SDV+ FGV + EIL
Sbjct: 184 RRFTSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 20 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 73
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
++VKLIG I ++ ++ E T G L + L R L ++ I A + LA+L
Sbjct: 74 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 130
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV-STRVVGTYGYAAPEYVMT 278
S+ ++RD N+L+ S KL DFGL++ D T+ +++ + APE +
Sbjct: 131 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINF 188
Query: 279 GHLTSKSDVYSFGVVLLEIL 298
TS SDV+ FGV + EIL
Sbjct: 189 RRFTSASDVWMFGVCMWEIL 208
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 117/281 (41%), Gaps = 34/281 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVA-EV 150
+F+ ++LG+G F V++ +G+ VA+K + + G + V EV
Sbjct: 12 DFKVGNLLGKGSFAGVYRA---------ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEV 62
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAA 210
QL HP++++L Y + + LV E G + +L R P +
Sbjct: 63 KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII 122
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
G+ +LH S +++RD SN+LL N K++DFGLA + H + + GT Y
Sbjct: 123 TGMLYLH--SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNY 178
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLY 330
+PE +SDV+S G + +L GR D N V A
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA----------- 227
Query: 331 QIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
D + S++ + QL L R+P R S+ V+
Sbjct: 228 ---DYEMPSFLSIEAKDLIHQL----LRRNPADRLSLSSVL 261
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
++VKLIG I ++ ++ E T G L + L R L ++ I A + LA+L
Sbjct: 72 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 128
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV-STRVVGTYGYAAPEYVMT 278
S+ ++RD N+L+ S KL DFGL++ D T+ +++ + APE +
Sbjct: 129 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINF 186
Query: 279 GHLTSKSDVYSFGVVLLEIL 298
TS SDV+ FGV + EIL
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 21 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 74
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
++VKLIG I ++ ++ E T G L + L R L ++ I A + LA+L
Sbjct: 75 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 131
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV-STRVVGTYGYAAPEYVMT 278
S+ ++RD N+L+ S KL DFGL++ D T+ +++ + APE +
Sbjct: 132 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINF 189
Query: 279 GHLTSKSDVYSFGVVLLEIL 298
TS SDV+ FGV + EIL
Sbjct: 190 RRFTSASDVWMFGVCMWEIL 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 23 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
++VKLIG I ++ ++ E T G L + L R L ++ I A + LA+L
Sbjct: 77 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 133
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV-STRVVGTYGYAAPEYVMT 278
S+ ++RD N+L+ S KL DFGL++ D T+ +++ + APE +
Sbjct: 134 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINF 191
Query: 279 GHLTSKSDVYSFGVVLLEIL 298
TS SDV+ FGV + EIL
Sbjct: 192 RRFTSASDVWMFGVCMWEIL 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 46 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 99
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
++VKLIG I ++ ++ E T G L + L R L ++ I A + LA+L
Sbjct: 100 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE-- 156
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV-STRVVGTYGYAAPEYVMT 278
S+ ++RD N+L+ S KL DFGL++ D T+ +++ + APE +
Sbjct: 157 SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINF 214
Query: 279 GHLTSKSDVYSFGVVLLEIL 298
TS SDV+ FGV + EIL
Sbjct: 215 RRFTSASDVWMFGVCMWEIL 234
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 27/227 (11%)
Query: 85 FQELKS---ATGNFRPDSI------LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL 135
FQ +K T + P+ LG+G FG V+K +E + + A K +
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVI 70
Query: 136 KPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI 195
+ +++ E+D L HPN+VKL+ ++ ++ EF G+++ +
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER 130
Query: 196 PLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQG 255
PL S + L +LH +I+RD K NIL + + KL+DFG++ +
Sbjct: 131 PLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 188
Query: 256 DKTHVSTRVVGTYGYAAPEYVMTGH-----LTSKSDVYSFGVVLLEI 297
+ S +GT + APE VM K+DV+S G+ L+E+
Sbjct: 189 IQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HH 158
LG G FG V IE + K + TVAVK LK HR ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 159 PNLVKLIGYCIEDDQRLLVY-EFMTRGSLENHL-FRRTIPLPW--------------SNR 202
N+V L+G C + L+V EF G+L +L +R +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
I + AKG+ FL S I+RD NILL + K+ DFGLA+ +
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV+L EI +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 27/227 (11%)
Query: 85 FQELKS---ATGNFRPDSI------LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL 135
FQ +K T + P+ LG+G FG V+K +E + + A K +
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVI 70
Query: 136 KPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI 195
+ +++ E+D L HPN+VKL+ ++ ++ EF G+++ +
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER 130
Query: 196 PLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQG 255
PL S + L +LH +I+RD K NIL + + KL+DFG++ +
Sbjct: 131 PLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRX 188
Query: 256 DKTHVSTRVVGTYGYAAPEYVMTGH-----LTSKSDVYSFGVVLLEI 297
+ S +GT + APE VM K+DV+S G+ L+E+
Sbjct: 189 IQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HH 158
LG G FG V IE + K + TVAVK LK HR ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 159 PNLVKLIGYCIEDDQRLLVY-EFMTRGSLENHL-FRRTIPLPW--------------SNR 202
N+V L+G C + L+V EF G+L +L +R +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
I + AKG+ FL S I+RD NILL + K+ DFGLA+ +
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV+L EI +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 106/225 (47%), Gaps = 34/225 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSG--ITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
LGEG FG V K TA G TVAVK LK + R+ ++E + L Q++
Sbjct: 31 LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL--FRRTIP------------------- 196
HP+++KL G C +D LL+ E+ GSL L R+ P
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 197 --LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQ 254
L + I A ++G+ +L S +++RD NIL+ K+SDFGL++ +
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMS--LVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 255 GDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
D ++ + A E + T++SDV+SFGV+L EI+T
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 132/286 (46%), Gaps = 36/286 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L+V E M G L+++L R++ P I++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++ ++RD N ++ ++ K+ DFG+ + + + +
Sbjct: 139 IADGMAYLN--AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV 196
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ APE + G T+ SD++SFGVVL EI + L Q L++++
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 241
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
L ++D L+ ++V+ L C +PK RP+ E+V +L
Sbjct: 242 LKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
++VKLIG I ++ ++ E T G L + L R L ++ I A + LA+L
Sbjct: 72 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE-- 128
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV-STRVVGTYGYAAPEYVMT 278
S+ ++RD N+L+ + KL DFGL++ D T+ +++ + APE +
Sbjct: 129 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINF 186
Query: 279 GHLTSKSDVYSFGVVLLEIL 298
TS SDV+ FGV + EIL
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLHHP 159
+GEG FG V +G +P P + VA+K+ K RE ++ E + Q HP
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
++VKLIG I ++ ++ E T G L + L R L ++ I A + LA+L
Sbjct: 452 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE-- 508
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV-STRVVGTYGYAAPEYVMT 278
S+ ++RD N+L+ + KL DFGL++ D T+ +++ + APE +
Sbjct: 509 SKRFVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINF 566
Query: 279 GHLTSKSDVYSFGVVLLEIL 298
TS SDV+ FGV + EIL
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 33/225 (14%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDF 152
+ + ++GEG FG V K I+++G + A+K +K + HR++ E++
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLR-------MDAAIKRMKEYASKDDHRDFAGELEV 78
Query: 153 LGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI---------------P 196
L +L HHPN++ L+G C L E+ G+L + L + +
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 197 LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD 256
L + A A+G+ +L + I+RD NIL+ Y AK++DFGL++ G
Sbjct: 139 LSSQQLLHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQ 192
Query: 257 KTHVSTRVVGT--YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ +V + +G + A E + T+ SDV+S+GV+L EI++
Sbjct: 193 EVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 32 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 86
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
+P +V++IG C E + +LV E G L +L ++ + N I++ + G+ +L
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE 144
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY--GYAAPEY 275
+ ++RD N+LL +++ AK+SDFGL+KA + D+ + + G + + APE
Sbjct: 145 ESN--FVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPEC 201
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ +SKSDV+SFGV++ E +
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 32 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 86
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
+P +V++IG C E + +LV E G L +L ++ + N I++ + G+ +L
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE 144
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY--GYAAPEY 275
+ ++RD N+LL +++ AK+SDFGL+KA + D+ + + G + + APE
Sbjct: 145 ESN--FVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPEC 201
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ +SKSDV+SFGV++ E +
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HH 158
LG G FG V IE + K + TVAVK LK HR ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 159 PNLVKLIGYCIEDDQRLLVY-EFMTRGSLENHL-FRRTIPLPW--------------SNR 202
N+V L+G C + L+V EF G+L +L +R +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
I + AKG+ FL S I+RD NILL + K+ DFGLA+ +
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV+L EI +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 13/232 (5%)
Query: 79 QLLQFTFQELKSATGN-FRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKP 137
+ LQ+ + E + T N FR +LG+GGFG V + G A ++ +
Sbjct: 169 RFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYA------CKKLEKKRI 222
Query: 138 DGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR-TIP 196
+G + E L +++ +V L D LV M G L+ H++
Sbjct: 223 KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG 282
Query: 197 LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD 256
P + + A GL LH E ++YRD K NILLD + ++SD GLA P+G
Sbjct: 283 FPEARAVFYAAEICCGLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340
Query: 257 KTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKR 308
+ R VGT GY APE V T D ++ G +L E++ G+ +++
Sbjct: 341 T--IKGR-VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 27/227 (11%)
Query: 85 FQELKS---ATGNFRPDSI------LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL 135
FQ +K T + P+ LG+G FG V+K +E + + A K +
Sbjct: 20 FQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVI 70
Query: 136 KPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI 195
+ +++ E+D L HPN+VKL+ ++ ++ EF G+++ +
Sbjct: 71 DTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER 130
Query: 196 PLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQG 255
PL S + L +LH +I+RD K NIL + + KL+DFG++ +
Sbjct: 131 PLTESQIQVVCKQTLDALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTR- 187
Query: 256 DKTHVSTRVVGTYGYAAPEYVMTGH-----LTSKSDVYSFGVVLLEI 297
+GT + APE VM K+DV+S G+ L+E+
Sbjct: 188 -XIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 33/219 (15%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-H 157
++GEG FG V K I+++G + A+K +K + HR++ E++ L +L H
Sbjct: 22 VIGEGNFGQVLKARIKKDGLR-------MDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI---------------PLPWSNR 202
HPN++ L+G C L E+ G+L + L + + L
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
+ A A+G+ +L + I+RD NIL+ Y AK++DFGL++ G + +V
Sbjct: 135 LHFAADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK- 187
Query: 263 RVVGT--YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ +G + A E + T+ SDV+S+GV+L EI++
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSG--ITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
LGEG FG V K TA G TVAVK LK + R+ ++E + L Q++
Sbjct: 31 LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL--FRRTIP------------------- 196
HP+++KL G C +D LL+ E+ GSL L R+ P
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 197 --LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQ 254
L + I A ++G+ +L +++RD NIL+ K+SDFGL++ +
Sbjct: 145 RALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 255 GDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
D ++ + A E + T++SDV+SFGV+L EI+T
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HH 158
LG G FG V IE + K + TVAVK LK HR ++E+ L + HH
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 159 PNLVKLIGYCIEDDQRLLVY-EFMTRGSLENHL-FRRTIPLPW--------------SNR 202
N+V L+G C + L+V EF G+L +L +R +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
I + AKG+ FL S I+RD NILL + K+ DFGLA+ +
Sbjct: 142 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ APE + T +SDV+SFGV+L EI +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 42/276 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G +G V+ G +TVAVK+LK D ++ E++ E + ++ HPN
Sbjct: 40 LGGGQYGEVYVG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 89
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHL-------FRRTIPLPWSNRIKIALGAAKGL 213
LV+L+G C + +V E+M G+L ++L + L + +I A+ +
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK 149
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
F+H RD N L+ + K++DFGL++ GD + AP
Sbjct: 150 NFIH--------RDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAP 200
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + KSDV++FGV+L EI T S P D ++Y ++
Sbjct: 201 ESLAYNTFSIKSDVWAFGVLLWEIATYGMS---PYPG-------------IDLSQVYDLL 244
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDE 369
+ + KV +L C P RPS E
Sbjct: 245 EKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAE 280
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 30 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 84
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
+P +V++IG C E + +LV E G L +L ++ + N I++ + G+ +L
Sbjct: 85 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE 142
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY--GYAAPEY 275
+ ++RD N+LL +++ AK+SDFGL+KA + D+ + + G + + APE
Sbjct: 143 ESN--FVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPEC 199
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ +SKSDV+SFGV++ E +
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 22 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 76
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
+P +V++IG C E + +LV E G L +L ++ + N I++ + G+ +L
Sbjct: 77 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE 134
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY--GYAAPEY 275
+ ++RD N+LL +++ AK+SDFGL+KA + D+ + + G + + APE
Sbjct: 135 ESN--FVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPEC 191
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ +SKSDV+SFGV++ E +
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 132/286 (46%), Gaps = 36/286 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L+V E M G L+++L R++ P I++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++ ++R+ N ++ ++ K+ DFG+ + + D + +
Sbjct: 139 IADGMAYLN--AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ APE + G T+ SD++SFGVVL EI + L Q L++++
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 241
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
L ++D L+ ++V+ L C +P RP+ E+V +L
Sbjct: 242 LKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 13/232 (5%)
Query: 79 QLLQFTFQELKSATGN-FRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKP 137
+ LQ+ + E + T N FR +LG+GGFG V + G A ++ +
Sbjct: 169 RFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYA------CKKLEKKRI 222
Query: 138 DGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR-TIP 196
+G + E L +++ +V L D LV M G L+ H++
Sbjct: 223 KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG 282
Query: 197 LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD 256
P + + A GL LH E ++YRD K NILLD + ++SD GLA P+G
Sbjct: 283 FPEARAVFYAAEICCGLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340
Query: 257 KTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKR 308
+ R VGT GY APE V T D ++ G +L E++ G+ +++
Sbjct: 341 T--IKGR-VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 132/286 (46%), Gaps = 36/286 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHHP 159
LG+G FG V++G N K + VAVK++ L+ E++ E +
Sbjct: 26 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI-----------PLPWSNRIKIALG 208
++V+L+G + L+V E M G L+++L R++ P I++A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A G+A+L+ ++ ++R+ N ++ ++ K+ DFG+ + + D + +
Sbjct: 140 IADGMAYLN--AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ APE + G T+ SD++SFGVVL EI + L Q L++++
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 242
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
L ++D L+ ++V+ L C +P RP+ E+V +L
Sbjct: 243 LKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 22/207 (10%)
Query: 99 SILGE-GGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
I+GE G FG V+K +E + + A K + + +++ E+D L
Sbjct: 15 EIIGELGDFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELEDYMVEIDILASCD 65
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
HPN+VKL+ ++ ++ EF G+++ + PL S + L +LH
Sbjct: 66 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 125
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR--VVGTYGYAAPEY 275
+I+RD K NIL + + KL+DFG++ + +T + R +GT + APE
Sbjct: 126 DNK--IIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTXIQRRDSFIGTPYWMAPEV 180
Query: 276 VMTGH-----LTSKSDVYSFGVVLLEI 297
VM K+DV+S G+ L+E+
Sbjct: 181 VMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 16 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 70
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
+P +V++IG C E + +LV E G L +L ++ + N I++ + G+ +L
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE 128
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY--GYAAPEY 275
+ ++RD N+LL +++ AK+SDFGL+KA + D+ + + G + + APE
Sbjct: 129 ESN--FVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPEC 185
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ +SKSDV+SFGV++ E +
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 374 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 428
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
+P +V++IG C E + +LV E G L +L ++ + N I++ + G+ +L
Sbjct: 429 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE 486
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY--GYAAPEY 275
+ ++RD N+LL +++ AK+SDFGL+KA + D+ + + G + + APE
Sbjct: 487 ESN--FVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPEC 543
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ +SKSDV+SFGV++ E +
Sbjct: 544 INYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 105/225 (46%), Gaps = 34/225 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSG--ITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
LGEG FG V K TA G TVAVK LK + R+ ++E + L Q++
Sbjct: 31 LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL--FRRTIP------------------- 196
HP+++KL G C +D LL+ E+ GSL L R+ P
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 197 --LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQ 254
L + I A ++G+ +L +++RD NIL+ K+SDFGL++ +
Sbjct: 145 RALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE 202
Query: 255 GDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
D ++ + A E + T++SDV+SFGV+L EI+T
Sbjct: 203 EDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 10 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 64
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
+P +V++IG C E + +LV E G L +L ++ + N I++ + G+ +L
Sbjct: 65 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE 122
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY--GYAAPEY 275
+ ++RD N+LL +++ AK+SDFGL+KA + D+ + + G + + APE
Sbjct: 123 ESN--FVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPEC 179
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ +SKSDV+SFGV++ E +
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 375 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 429
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
+P +V++IG C E + +LV E G L +L ++ + N I++ + G+ +L
Sbjct: 430 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE 487
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY--GYAAPEY 275
+ ++RD N+LL +++ AK+SDFGL+KA + D+ + + G + + APE
Sbjct: 488 ESN--FVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPEC 544
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ +SKSDV+SFGV++ E +
Sbjct: 545 INYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 12/204 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 12 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 66
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
+P +V++IG C E + +LV E G L +L ++ + N I++ + G+ +L
Sbjct: 67 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE 124
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY--GYAAPEY 275
+ ++RD N+LL +++ AK+SDFGL+KA + D+ + + G + + APE
Sbjct: 125 ESN--FVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENYYKAQTHGKWPVKWYAPEC 181
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ +SKSDV+SFGV++ E +
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
R +LG G FG V KG WI E + I V +K ++ G Q + +
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESI------KIPVCIKVIEDKSGRQSFQAVTDHML 85
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+G L H ++V+L+G C +L V +++ GSL +H+ + L + + AK
Sbjct: 86 AIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK 144
Query: 212 GLAFL--HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYG 269
G+ +L HG +++R+ N+LL S +++DFG+A P DK + +
Sbjct: 145 GMYYLEEHG----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 200
Query: 270 YAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ A E + G T +SDV+S+GV + E++T
Sbjct: 201 WMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
R +LG G FG V KG WI E + I V +K ++ G Q + +
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESI------KIPVCIKVIEDKSGRQSFQAVTDHML 67
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+G L H ++V+L+G C +L V +++ GSL +H+ + L + + AK
Sbjct: 68 AIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK 126
Query: 212 GLAFL--HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYG 269
G+ +L HG +++R+ N+LL S +++DFG+A P DK + +
Sbjct: 127 GMYYLEEHG----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 182
Query: 270 YAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ A E + G T +SDV+S+GV + E++T
Sbjct: 183 WMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + +L+H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKLNH 93
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP-------WSNRIKIALGAAK 211
N+V+ IG ++ R ++ E M G L++ L R T P P + + +A A
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSE---YNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
G +L I+RD N LL AK+ DFG+A+ + +
Sbjct: 153 GCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 210
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ PE M G TSK+D +SFGV+L EI +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 12/204 (5%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
D LG G FG V KG+ + + + L+ E +AE + + QL
Sbjct: 16 DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLD 70
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
+P +V++IG C E + +LV E G L +L ++ + N I++ + G+ +L
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLE 128
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY--GYAAPEY 275
+ ++RD N+LL +++ AK+SDFGL+KA + D+ + G + + APE
Sbjct: 129 ESN--FVHRDLAARNVLLVTQHYAKISDFGLSKA-LRADENXYKAQTHGKWPVKWYAPEC 185
Query: 276 VMTGHLTSKSDVYSFGVVLLEILT 299
+ +SKSDV+SFGV++ E +
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 33/219 (15%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-H 157
++GEG FG V K I+++G + A+K +K + HR++ E++ L +L H
Sbjct: 29 VIGEGNFGQVLKARIKKDGLR-------MDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI---------------PLPWSNR 202
HPN++ L+G C L E+ G+L + L + + L
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
+ A A+G+ +L + I+R+ NIL+ Y AK++DFGL++ G + +V
Sbjct: 142 LHFAADVARGMDYL--SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVK- 194
Query: 263 RVVGT--YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ +G + A E + T+ SDV+S+GV+L EI++
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V+K +E G A K ++ + +++ E++ L HP
Sbjct: 27 LGDGAFGKVYKAKNKETGA---------LAAAKVIETKSEEELEDYIVEIEILATCDHPY 77
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
+VKL+G D + ++ EF G+++ + L + + L FLH S
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH--S 135
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+ +I+RD K N+L+ E + +L+DFG++ + + S +GT + APE VM
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCET 193
Query: 281 LTS-----KSDVYSFGVVLLEI 297
+ K+D++S G+ L+E+
Sbjct: 194 MKDTPYDYKADIWSLGITLIEM 215
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 30/279 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VA+K +K +G E++ E + L H
Sbjct: 32 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV+L G C + ++ E+M G L N+L +++ + + +L S
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--S 138
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+ ++RD N L++ + K+SDFGL++ ++T S ++ PE +M
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETS-SVGSKFPVRWSPPEVLMYSK 197
Query: 281 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELN 340
+SKSD+++FGV++ EI + + ++ + E +++A +LY+ P L
Sbjct: 198 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIAQGLRLYR---PHL--- 245
Query: 341 YSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
+KV + Y+C RP+ ++ + + D
Sbjct: 246 ----ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 127/284 (44%), Gaps = 36/284 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VA+K +K +G E++ E + L H
Sbjct: 17 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV+L G C + ++ E+M G L N+L +++ + + +L S
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--S 123
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT---YGYAAPEYVM 277
+ ++RD N L++ + K+SDFGL++ D + S+ VG+ ++ PE +M
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSS--VGSKFPVRWSPPEVLM 179
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
+SKSD+++FGV++ EI + + ++ + E +++A +LY+ P L
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIAQGLRLYR---PHL 230
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQDLN 381
+KV + Y+C RP+ ++ + + D N
Sbjct: 231 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEN 267
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + +L+H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKLNH 107
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP-------WSNRIKIALGAAK 211
N+V+ IG ++ R ++ E M G L++ L R T P P + + +A A
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSE---YNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
G +L I+RD N LL AK+ DFG+A+ + +
Sbjct: 167 GCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ PE M G TSK+D +SFGV+L EI +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G FG V+K +E G A K ++ + +++ E++ L HP
Sbjct: 19 LGDGAFGKVYKAKNKETGA---------LAAAKVIETKSEEELEDYIVEIEILATCDHPY 69
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
+VKL+G D + ++ EF G+++ + L + + L FLH S
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH--S 127
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
+ +I+RD K N+L+ E + +L+DFG++ + + S +GT + APE VM
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCET 185
Query: 281 LTS-----KSDVYSFGVVLLEI 297
+ K+D++S G+ L+E+
Sbjct: 186 MKDTPYDYKADIWSLGITLIEM 207
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 119
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP-------WSNRIKIALGAAK 211
N+V+ IG ++ R ++ E M G L++ L R T P P + + +A A
Sbjct: 120 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIAC 178
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSE---YNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
G +L I+RD N LL AK+ DFG+A+ + +
Sbjct: 179 GCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 236
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ PE M G TSK+D +SFGV+L EI +
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 126/282 (44%), Gaps = 36/282 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VA+K +K +G E++ E + L H
Sbjct: 17 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV+L G C + ++ E+M G L N+L +++ + + +L S
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--S 123
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT---YGYAAPEYVM 277
+ ++RD N L++ + K+SDFGL++ D + S+R G+ ++ PE +M
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSR--GSKFPVRWSPPEVLM 179
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
+SKSD+++FGV++ EI + + ++ + E +++A +LY+ P L
Sbjct: 180 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIAQGLRLYR---PHL 230
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
+KV + Y+C RP+ ++ + + D
Sbjct: 231 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 109
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP-------WSNRIKIALGAAK 211
N+V+ IG ++ R ++ E M G L++ L R T P P + + +A A
Sbjct: 110 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIAC 168
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSE---YNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
G +L I+RD N LL AK+ DFG+A+ + +
Sbjct: 169 GCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 226
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ PE M G TSK+D +SFGV+L EI +
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 126/282 (44%), Gaps = 36/282 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VA+K +K +G E++ E + L H
Sbjct: 16 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 64
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV+L G C + ++ E+M G L N+L +++ + + +L S
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--S 122
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT---YGYAAPEYVM 277
+ ++RD N L++ + K+SDFGL++ D + S+ VG+ ++ PE +M
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSS--VGSKFPVRWSPPEVLM 178
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
+SKSD+++FGV++ EI + + ++ + E +++A +LY+ P L
Sbjct: 179 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIAQGLRLYR---PHL 229
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
+KV + Y+C RP+ ++ + + D
Sbjct: 230 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 264
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 92
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP-------WSNRIKIALGAAK 211
N+V+ IG ++ R ++ E M G L++ L R T P P + + +A A
Sbjct: 93 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSE---YNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
G +L I+RD N LL AK+ DFG+A+ + +
Sbjct: 152 GCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ PE M G TSK+D +SFGV+L EI +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 126/282 (44%), Gaps = 36/282 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VA+K +K +G E++ E + L H
Sbjct: 12 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 60
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV+L G C + ++ E+M G L N+L +++ + + +L S
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--S 118
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT---YGYAAPEYVM 277
+ ++RD N L++ + K+SDFGL++ D + S+ VG+ ++ PE +M
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSS--VGSKFPVRWSPPEVLM 174
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
+SKSD+++FGV++ EI + + ++ + E +++A +LY+ P L
Sbjct: 175 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIAQGLRLYR---PHL 225
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
+KV + Y+C RP+ ++ + + D
Sbjct: 226 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 260
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 92
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP-------WSNRIKIALGAAK 211
N+V+ IG ++ R ++ E M G L++ L R T P P + + +A A
Sbjct: 93 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSE---YNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
G +L I+RD N LL AK+ DFG+A+ + +
Sbjct: 152 GCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ PE M G TSK+D +SFGV+L EI +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 18/219 (8%)
Query: 87 ELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW 146
++K +F +LG+G FG VF ++ A+K+LK D + +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQ---------FFAIKALKKDVVLMDDDV 62
Query: 147 ---VAEVDFLG-QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNR 202
+ E L HP L + + V E++ G L H+ + S
Sbjct: 63 ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSRA 121
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
A GL FLH S+ ++YRD K NILLD + + K++DFG+ K GD +
Sbjct: 122 TFYAAEIILGLQFLH--SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TN 177
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGR 301
GT Y APE ++ D +SFGV+L E+L G+
Sbjct: 178 EFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 93
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP-------WSNRIKIALGAAK 211
N+V+ IG ++ R ++ E M G L++ L R T P P + + +A A
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSE---YNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
G +L I+RD N LL AK+ DFG+A+ + +
Sbjct: 153 GCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 210
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ PE M G TSK+D +SFGV+L EI +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 22/212 (10%)
Query: 157 HHPNLVKLIGYCIEDDQRLL-VYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
+HP LV L C + + RL V E++ G L H+ +R LP + + + L +
Sbjct: 79 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNY 136
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQ-GDKTHVSTRVVGTYGYAAPE 274
LH +IYRD K N+LLDSE + KL+D+G+ K G + GD T + GT Y APE
Sbjct: 137 LH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 191
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSG--EQNLVAWARQYLADKRKLYQI 332
+ D ++ GV++ E++ GR D S +QN + Q + +K QI
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK----QI 247
Query: 333 VDPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
PR + S+K + L++DPK R
Sbjct: 248 RIPR---SMSVKAASVLKSF----LNKDPKER 272
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 99
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP-------WSNRIKIALGAAK 211
N+V+ IG ++ R ++ E M G L++ L R T P P + + +A A
Sbjct: 100 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIAC 158
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSE---YNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
G +L I+RD N LL AK+ DFG+A+ + +
Sbjct: 159 GCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 216
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ PE M G TSK+D +SFGV+L EI +
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 22/212 (10%)
Query: 157 HHPNLVKLIGYCIEDDQRLL-VYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
+HP LV L C + + RL V E++ G L H+ +R LP + + + L +
Sbjct: 111 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNY 168
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQ-GDKTHVSTRVVGTYGYAAPE 274
LH +IYRD K N+LLDSE + KL+D+G+ K G + GD T + GT Y APE
Sbjct: 169 LH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAPE 223
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSG--EQNLVAWARQYLADKRKLYQI 332
+ D ++ GV++ E++ GR D S +QN + Q + +K QI
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK----QI 279
Query: 333 VDPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
PR + S+K + L++DPK R
Sbjct: 280 RIPR---SLSVKAASVLKSF----LNKDPKER 304
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 126/282 (44%), Gaps = 36/282 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VA+K +K +G E++ E + L H
Sbjct: 32 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV+L G C + ++ E+M G L N+L +++ + + +L S
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--S 138
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT---YGYAAPEYVM 277
+ ++RD N L++ + K+SDFGL++ D + S+ VG+ ++ PE +M
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSS--VGSKFPVRWSPPEVLM 194
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
+SKSD+++FGV++ EI + + ++ + E +++A +LY+ P L
Sbjct: 195 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIAQGLRLYR---PHL 245
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
+KV + Y+C RP+ ++ + + D
Sbjct: 246 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 19/233 (8%)
Query: 73 DEKSPCQLLQFTFQELKSAT---GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGIT 129
DE+ +L F Q+ K +F S LG G G VFK KP SG+
Sbjct: 45 DEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLV 95
Query: 130 VAVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLEN 188
+A K + + R + + E+ L + + P +V G D + + E M GSL +
Sbjct: 96 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-D 154
Query: 189 HLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGL 248
+ ++ +P K+++ KGL +L + +++RD K SNIL++S KL DFG+
Sbjct: 155 QVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV 213
Query: 249 AKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGR 301
+ G D ++ VGT Y +PE + H + +SD++S G+ L+E+ GR
Sbjct: 214 S--GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 126/282 (44%), Gaps = 36/282 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V G K VA+K +K +G E++ E + L H
Sbjct: 23 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 71
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV+L G C + ++ E+M G L N+L +++ + + +L S
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--S 129
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT---YGYAAPEYVM 277
+ ++RD N L++ + K+SDFGL++ D + S+ VG+ ++ PE +M
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSS--VGSKFPVRWSPPEVLM 185
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
+SKSD+++FGV++ EI + + ++ + E +++A +LY+ P L
Sbjct: 186 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------TAEHIAQGLRLYR---PHL 236
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
+KV + Y+C RP+ ++ + + D
Sbjct: 237 -------ASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 271
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDF 152
+F S LG G G VFK KP SG+ +A K + + R + + E+
Sbjct: 10 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 60
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKG 212
L + + P +V G D + + E M GSL + + ++ +P K+++ KG
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKG 119
Query: 213 LAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAA 272
L +L +++RD K SNIL++S KL DFG++ G D+ ++ VGT Y +
Sbjct: 120 LTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MANEFVGTRSYMS 174
Query: 273 PEYVMTGHLTSKSDVYSFGVVLLEILTGR 301
PE + H + +SD++S G+ L+E+ GR
Sbjct: 175 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 93
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP-------WSNRIKIALGAAK 211
N+V+ IG ++ R ++ E M G L++ L R T P P + + +A A
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSE---YNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
G +L I+RD N LL AK+ DFG+A+ + +
Sbjct: 153 GCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPV 210
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ PE M G TSK+D +SFGV+L EI +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 107
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP-------WSNRIKIALGAAK 211
N+V+ IG ++ R ++ E M G L++ L R T P P + + +A A
Sbjct: 108 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSE---YNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
G +L I+RD N LL AK+ DFG+A+ + +
Sbjct: 167 GCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ PE M G TSK+D +SFGV+L EI +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 84
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP-------WSNRIKIALGAAK 211
N+V+ IG ++ R ++ E M G L++ L R T P P + + +A A
Sbjct: 85 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIAC 143
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSE---YNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
G +L I+RD N LL AK+ DFG+A+ + +
Sbjct: 144 GCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 201
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ PE M G TSK+D +SFGV+L EI +
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPD-GLQGHREWVAEVD 151
R +LG G FG V+KG WI P I VA+K L+ + + ++E + E
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWI------PDGENVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + P + +L+G C+ +L V + M G L +H+ L + + + AK
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAK 130
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+++L +++RD N+L+ S + K++DFGLA+ + + + +
Sbjct: 131 GMSYLEDVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWM 188
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 189 ALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 110
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP-------WSNRIKIALGAAK 211
N+V+ IG ++ R ++ E M G L++ L R T P P + + +A A
Sbjct: 111 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIAC 169
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSE---YNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
G +L I+RD N LL AK+ DFG+A+ + +
Sbjct: 170 GCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 227
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ PE M G TSK+D +SFGV+L EI +
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 104/212 (49%), Gaps = 22/212 (10%)
Query: 157 HHPNLVKLIGYCIEDDQRLL-VYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
+HP LV L C + + RL V E++ G L H+ +R LP + + + L +
Sbjct: 64 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNY 121
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQ-GDKTHVSTRVVGTYGYAAPE 274
LH +IYRD K N+LLDSE + KL+D+G+ K G + GD T + GT Y APE
Sbjct: 122 LH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 176
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSG--EQNLVAWARQYLADKRKLYQI 332
+ D ++ GV++ E++ GR D S +QN + Q + +K QI
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK----QI 232
Query: 333 VDPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
PR SL K + + + L++DPK R
Sbjct: 233 RIPR-----SLS--VKAASVLKSFLNKDPKER 257
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 124/275 (45%), Gaps = 37/275 (13%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G FG V+KG +N T I + + + +Q E+ L Q P
Sbjct: 27 IGKGSFGEVYKGI--DNHTKEVVAIKIIDLEEAEDEIEDIQ------QEITVLSQCDSPY 78
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
+ + G ++ + ++ E++ GS + L + PL + I KGL +LH S
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLH--S 134
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
E I+RD K +N+LL + + KL+DFG+ AG D VGT + APE +
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGV--AGQLTDTQIKRNXFVGTPFWMAPEVIKQSA 192
Query: 281 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVD---PRL 337
K+D++S G+ +E+ G + P+ + L R L+ I P L
Sbjct: 193 YDFKADIWSLGITAIELAKG------EPPNSD----------LHPMRVLFLIPKNSPPTL 236
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
E +S + + CL++DP+ RP+ E++K
Sbjct: 237 EGQHS----KPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 19/233 (8%)
Query: 73 DEKSPCQLLQFTFQELKSAT---GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGIT 129
DE+ +L F Q+ K +F S LG G G VFK KP SG+
Sbjct: 10 DEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLV 60
Query: 130 VAVKSLKPDGLQGHR-EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLEN 188
+A K + + R + + E+ L + + P +V G D + + E M GSL +
Sbjct: 61 MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-D 119
Query: 189 HLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGL 248
+ ++ +P K+++ KGL +L + +++RD K SNIL++S KL DFG+
Sbjct: 120 QVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGV 178
Query: 249 AKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGR 301
+ G D ++ VGT Y +PE + H + +SD++S G+ L+E+ GR
Sbjct: 179 S--GQLIDS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNH 133
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP-------WSNRIKIALGAAK 211
N+V+ IG ++ R ++ E M G L++ L R T P P + + +A A
Sbjct: 134 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIAC 192
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSE---YNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
G +L I+RD N LL AK+ DFG+A+ + +
Sbjct: 193 GCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 250
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ PE M G TSK+D +SFGV+L EI +
Sbjct: 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 104/212 (49%), Gaps = 22/212 (10%)
Query: 157 HHPNLVKLIGYCIEDDQRLL-VYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
+HP LV L C + + RL V E++ G L H+ +R LP + + + L +
Sbjct: 68 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNY 125
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQ-GDKTHVSTRVVGTYGYAAPE 274
LH +IYRD K N+LLDSE + KL+D+G+ K G + GD T + GT Y APE
Sbjct: 126 LH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 180
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSG--EQNLVAWARQYLADKRKLYQI 332
+ D ++ GV++ E++ GR D S +QN + Q + +K QI
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK----QI 236
Query: 333 VDPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
PR SL K + + + L++DPK R
Sbjct: 237 RIPR-----SLS--VKAASVLKSFLNKDPKER 261
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD--GLQGHREWVAEVDFLGQLHH 158
LG G FG V++G + P S + VAVK+L P+ Q +++ E + + +H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTL-PEVYSEQDELDFLMEALIISKFNH 107
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP-------WSNRIKIALGAAK 211
N+V+ IG ++ R ++ E M G L++ L R T P P + + +A A
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSE---YNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
G +L I+RD N LL AK+ DFG+A+ + +
Sbjct: 167 GCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ PE M G TSK+D +SFGV+L EI +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDF 152
+F S LG G G VFK KP SG+ +A K + + R + + E+
Sbjct: 26 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 76
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKG 212
L + + P +V G D + + E M GSL + + ++ +P K+++ KG
Sbjct: 77 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKG 135
Query: 213 LAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAA 272
L +L +++RD K SNIL++S KL DFG++ G D ++ VGT Y +
Sbjct: 136 LTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMS 190
Query: 273 PEYVMTGHLTSKSDVYSFGVVLLEILTGR 301
PE + H + +SD++S G+ L+E+ GR
Sbjct: 191 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 73
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L++ + M G L +++ + + + AK
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 133 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 189
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 18/219 (8%)
Query: 87 ELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW 146
++K +F +LG+G FG VF ++ A+K+LK D + +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQ---------FFAIKALKKDVVLMDDDV 61
Query: 147 ---VAEVDFLG-QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNR 202
+ E L HP L + + V E++ G L H+ + S
Sbjct: 62 ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSRA 120
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
A GL FLH S+ ++YRD K NILLD + + K++DFG+ K GD +
Sbjct: 121 TFYAAEIILGLQFLH--SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TN 176
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGR 301
GT Y APE ++ D +SFGV+L E+L G+
Sbjct: 177 XFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 70
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L++ + M G L +++ + + + AK
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ +L +++RD N+L+ + + K++DFGLAK +K + + +
Sbjct: 130 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 79
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 138
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 139 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 195
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 69
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L++ + M G L +++ + + + AK
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 129 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 185
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 72
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L++ + M G L +++ + + + AK
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 132 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 188
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 71
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L++ + M G L +++ + + + AK
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ +L +++RD N+L+ + + K++DFGLAK +K + + +
Sbjct: 131 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 105/209 (50%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 70
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L++ + M G L +++ + + + AK
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 130 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 186
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 127/283 (44%), Gaps = 38/283 (13%)
Query: 98 DSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSL-KPDGLQGHREWVAEVDFLGQ 155
D ++G+G FG V+ G +I++ + I A+KSL + +Q ++ E +
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQ-------NRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 156 LHHPNLVKLIGYCIEDD---QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKG 212
L+HPN++ LIG + + LL Y M G L + + I L A+G
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPY--MCHGDLLQFIRSPQRNPTVKDLISFGLQVARG 136
Query: 213 LAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD----KTHVSTRVVGTY 268
+ +L + ++RD N +LD + K++DFGLA+ + + H R+
Sbjct: 137 MEYL--AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--PV 192
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRK 328
+ A E + T T+KSDV+SFGV+L E+LT R R +L +LA R+
Sbjct: 193 KWTALESLQTYRFTTKSDVWSFGVLLWELLT--RGAPPYRHIDPFDLT----HFLAQGRR 246
Query: 329 LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
L Q Y + +V Q C DP RP+ +V
Sbjct: 247 LPQP-------EYCPDSLYQVMQ---QCWEADPAVRPTFRVLV 279
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDF 152
+F S LG G G VFK KP SG+ +A K + + R + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKG 212
L + + P +V G D + + E M GSL + + ++ +P K+++ KG
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 213 LAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAA 272
L +L + +++RD K SNIL++S KL DFG++ G D ++ VGT Y +
Sbjct: 117 LTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMS 171
Query: 273 PEYVMTGHLTSKSDVYSFGVVLLEILTGR 301
PE + H + +SD++S G+ L+E+ GR
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDF 152
+F S LG G G VFK KP SG+ +A K + + R + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKG 212
L + + P +V G D + + E M GSL + + ++ +P K+++ KG
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 213 LAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAA 272
L +L + +++RD K SNIL++S KL DFG++ G D ++ VGT Y +
Sbjct: 117 LTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMS 171
Query: 273 PEYVMTGHLTSKSDVYSFGVVLLEILTGR 301
PE + H + +SD++S G+ L+E+ GR
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDF 152
+F S LG G G VFK KP SG+ +A K + + R + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKG 212
L + + P +V G D + + E M GSL + + ++ +P K+++ KG
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 213 LAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAA 272
L +L + +++RD K SNIL++S KL DFG++ G D ++ VGT Y +
Sbjct: 117 LTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMS 171
Query: 273 PEYVMTGHLTSKSDVYSFGVVLLEILTGR 301
PE + H + +SD++S G+ L+E+ GR
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 75
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 134
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 135 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 191
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 104/219 (47%), Gaps = 26/219 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK-PDGLQG-HREWVA 148
AT + P + +G G +G V+K P SG VA+KS++ P+G +G V
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 149 EVDFLGQLH---HPNLVKLIGYCI--EDDQRL---LVYEFMTRGSLENHLFRRTIP-LPW 199
EV L +L HPN+V+L+ C D+ + LV+E + + L +L + P LP
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 200 SNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTH 259
+ +GL FLH +++RD K NIL+ S KL+DFGLA+
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQM 166
Query: 260 VSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEIL 298
VV T Y APE ++ + D++S G + E+
Sbjct: 167 ALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 72
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 132 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 188
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 76
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 136 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 192
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDF 152
+F S LG G G VFK KP SG+ +A K + + R + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKG 212
L + + P +V G D + + E M GSL + + ++ +P K+++ KG
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 213 LAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAA 272
L +L +++RD K SNIL++S KL DFG++ G D ++ VGT Y +
Sbjct: 117 LTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMS 171
Query: 273 PEYVMTGHLTSKSDVYSFGVVLLEILTGR 301
PE + H + +SD++S G+ L+E+ GR
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHR-EWVAEVDF 152
+F S LG G G VFK KP SG+ +A K + + R + + E+
Sbjct: 7 DFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQV 57
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKG 212
L + + P +V G D + + E M GSL + + ++ +P K+++ KG
Sbjct: 58 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKG 116
Query: 213 LAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAA 272
L +L +++RD K SNIL++S KL DFG++ G D ++ VGT Y +
Sbjct: 117 LTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMS 171
Query: 273 PEYVMTGHLTSKSDVYSFGVVLLEILTGR 301
PE + H + +SD++S G+ L+E+ GR
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 10/177 (5%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALG 208
EV QL H N+V +I EDD LV E++ +L ++ PL I
Sbjct: 61 EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQ 119
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
G+ H +++RD K NIL+DS K+ DFG+AKA + T + V+GT
Sbjct: 120 ILDGIK--HAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTV 176
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLAD 325
Y +PE +D+YS G+VL E+L G + P + V+ A +++ D
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVG------EPPFNGETAVSIAIKHIQD 227
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 94
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 153
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 154 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 210
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 72
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ +L +++RD N+L+ + + K++DFGLAK +K + + +
Sbjct: 132 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 69
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 129 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 185
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 14/212 (6%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA 148
K + +F+ LG G FG V NG A + V+ + + R ++
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALG 208
V HP ++++ G + Q ++ +++ G L + L R++ P N +
Sbjct: 62 IVT------HPFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFP--NPVAKFYA 112
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
A LA + S+ +IYRD K NILLD + K++DFG AK P V+ + GT
Sbjct: 113 AEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTP 167
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE V T D +SFG+++ E+L G
Sbjct: 168 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 21/208 (10%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+LG+GG+G VF+ + + A + V K++ + AE + L ++ HP
Sbjct: 24 VLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 160 NLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLP-----WSNRIKIALGAAKGL 213
+V LI Y + +L L+ E+++ G L L R I + + I +ALG
Sbjct: 82 FIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG----- 135
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQ-GDKTHVSTRVVGTYGYAA 272
H + +IYRD K NI+L+ + + KL+DFGL K G TH GT Y A
Sbjct: 136 ---HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---FCGTIEYMA 189
Query: 273 PEYVMTGHLTSKSDVYSFGVVLLEILTG 300
PE +M D +S G ++ ++LTG
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 72
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 132 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 188
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 71
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 131 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 187
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 69
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ +L +++RD N+L+ + + K++DFGLAK +K + + +
Sbjct: 129 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 104/219 (47%), Gaps = 26/219 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK-PDGLQG-HREWVA 148
AT + P + +G G +G V+K P SG VA+KS++ P+G +G V
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 149 EVDFLGQLH---HPNLVKLIGYCI--EDDQRL---LVYEFMTRGSLENHLFRRTIP-LPW 199
EV L +L HPN+V+L+ C D+ + LV+E + + L +L + P LP
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 200 SNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTH 259
+ +GL FLH +++RD K NIL+ S KL+DFGLA+
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQM 166
Query: 260 VSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEIL 298
VV T Y APE ++ + D++S G + E+
Sbjct: 167 ALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 63
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 122
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 123 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 179
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 69
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 129 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 185
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+LG+GG+G VF+ + + A + V K++ + AE + L ++ HP
Sbjct: 24 VLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 160 NLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLP-----WSNRIKIALGAAKGL 213
+V LI Y + +L L+ E+++ G L L R I + + I +ALG
Sbjct: 82 FIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG----- 135
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
H + +IYRD K NI+L+ + + KL+DFGL K D T V+ GT Y AP
Sbjct: 136 ---HLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIH-DGT-VTHXFCGTIEYMAP 190
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTG 300
E +M D +S G ++ ++LTG
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVD 151
GN++ LGEG FG V + G A + K L +QG E E+
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALK----IINKKVLAKSDMQGRIE--REIS 65
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+L L HP+++KL D+ ++V E+ + + R + + R + +A
Sbjct: 66 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 125
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
H +++RD K N+LLD N K++DFGL+ G+ S G+ YA
Sbjct: 126 EYCHRH----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYA 178
Query: 272 APEYVMTGHLTS--KSDVYSFGVVLLEILTGRRSMD 305
APE V++G L + + DV+S GV+L +L R D
Sbjct: 179 APE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 80 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 135 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVD 151
GN++ LGEG FG V + G A + K L +QG E E+
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALK----IINKKVLAKSDMQGRIE--REIS 66
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+L L HP+++KL D+ ++V E+ + + R + + R + +A
Sbjct: 67 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 126
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
H +++RD K N+LLD N K++DFGL+ G+ S G+ YA
Sbjct: 127 EYCHRH----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYA 179
Query: 272 APEYVMTGHLTS--KSDVYSFGVVLLEILTGRRSMD 305
APE V++G L + + DV+S GV+L +L R D
Sbjct: 180 APE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 80 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 135 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVD 151
GN++ LGEG FG V + G A + K L +QG E E+
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALK----IINKKVLAKSDMQGRIE--REIS 56
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+L L HP+++KL D+ ++V E+ + + R + + R + +A
Sbjct: 57 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 116
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
H +++RD K N+LLD N K++DFGL+ G+ S G+ YA
Sbjct: 117 EYCHRHK----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYA 169
Query: 272 APEYVMTGHLTS--KSDVYSFGVVLLEILTGRRSMD 305
APE V++G L + + DV+S GV+L +L R D
Sbjct: 170 APE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 31 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 81
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 82 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 136
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 137 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 37 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 87
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 88 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 142
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 143 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 80 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 135 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL-------FRRTIPLPWSNRIKIALGAA 210
H N++ I D R E M L HL +T L +
Sbjct: 100 HENIIG-----INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 155 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 104/219 (47%), Gaps = 26/219 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK-PDGLQG-HREWVA 148
AT + P + +G G +G V+K P SG VA+KS++ P+G +G V
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 149 EVDFLGQLH---HPNLVKLIGYCI--EDDQRL---LVYEFMTRGSLENHLFRRTIP-LPW 199
EV L +L HPN+V+L+ C D+ + LV+E + + L +L + P LP
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 200 SNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTH 259
+ +GL FLH +++RD K NIL+ S KL+DFGLA+
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQM 166
Query: 260 VSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEIL 298
VV T Y APE ++ + D++S G + E+
Sbjct: 167 ALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 80 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 135 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 33/292 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQ-GHREWVAEVDF 152
++ ++G G V + AP K VA+K + + Q E + E+
Sbjct: 16 DYELQEVIGSGATAVVQAAY-----CAPKKE----KVAIKRINLEKCQTSMDELLKEIQA 66
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLEN---HLF----RRTIPLPWSNRIKI 205
+ Q HHPN+V + D+ LV + ++ GS+ + H+ ++ L S I
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 206 ALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGL-AKAGPQGDKTHVSTR- 263
+GL +LH + I+RD K NILL + + +++DFG+ A GD T R
Sbjct: 127 LREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 184
Query: 264 -VVGTYGYAAPEYV--MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 320
VGT + APE + + G+ K+D++SFG+ +E+ TG K P ++
Sbjct: 185 TFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPYHKYPP---MKVLMLTL 240
Query: 321 QYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
Q D L V + L K +K+ L CL +DP+ RP+ E+++
Sbjct: 241 Q--NDPPSLETGVQDKEMLKKYGKSFRKMISL---CLQKDPEKRPTAAELLR 287
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 24/256 (9%)
Query: 130 VAVKSLKPDGLQ-GHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLEN 188
VA+K + + Q E + E+ + Q HHPN+V + D+ LV + ++ GS+ +
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 189 ---HLF----RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA 241
H+ ++ L S I +GL +LH + I+RD K NILL + +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--IHRDVKAGNILLGEDGSV 155
Query: 242 KLSDFGL-AKAGPQGDKTHVSTR--VVGTYGYAAPEYV--MTGHLTSKSDVYSFGVVLLE 296
+++DFG+ A GD T R VGT + APE + + G+ K+D++SFG+ +E
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAIE 214
Query: 297 ILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNC 356
+ TG K P ++ Q D L V + L K +K+ L C
Sbjct: 215 LATGAAPYHKYPP---MKVLMLTLQ--NDPPSLETGVQDKEMLKKYGKSFRKMISL---C 266
Query: 357 LSRDPKSRPSMDEVVK 372
L +DP+ RP+ E+++
Sbjct: 267 LQKDPEKRPTAAELLR 282
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 84 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 16/216 (7%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVD 151
GN++ LGEG FG V + G A + K L +QG E E+
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALK----IINKKVLAKSDMQGRIE--REIS 60
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+L L HP+++KL D+ ++V E+ + + R + + R + +A
Sbjct: 61 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAV 120
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
H +++RD K N+LLD N K++DFGL+ G+ S G+ YA
Sbjct: 121 EYCHRH----KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYA 173
Query: 272 APEYVMTGHLTS--KSDVYSFGVVLLEILTGRRSMD 305
APE V++G L + + DV+S GV+L +L R D
Sbjct: 174 APE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYXQRTLREIKILLRFR 83
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 84 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIAL 207
E+ L+H N+VK G+ E + + L E+ + G L + + +P P + R L
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A G+ +LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 114 MA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 268 YGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
Y APE + ++ DV+S G+VL +L G D+ S ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 27 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 78 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 132
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 133 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 34 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 85 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 139
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 140 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 35 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 85
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 86 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 140
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 141 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 26 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 76
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 77 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 131
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 132 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 84 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIAL 207
E+ L+H N+VK G+ E + + L E+ + G L + + +P P + R L
Sbjct: 55 EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A G+ +LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 115 MA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 268 YGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
Y APE + ++ DV+S G+VL +L G D+ S ++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 27 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 77
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 78 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 132
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 133 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 49 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 100 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 154
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 155 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 80 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 134
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 135 RGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIAL 207
E+ L+H N+VK G+ E + + L E+ + G L + + +P P + R L
Sbjct: 54 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A G+ +LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 114 MA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 268 YGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
Y APE + ++ DV+S G+VL +L G D+ S ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIAL 207
E+ L+H N+VK G+ E + + L E+ + G L + + +P P + R L
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A G+ +LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 114 MA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 268 YGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
Y APE + ++ DV+S G+VL +L G D+ S ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIAL 207
E+ L+H N+VK G+ E + + L E+ + G L + + +P P + R L
Sbjct: 53 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 112
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A G+ +LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 113 MA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 168
Query: 268 YGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
Y APE + ++ DV+S G+VL +L G D+ S ++
Sbjct: 169 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 215
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIAL 207
E+ L+H N+VK G+ E + + L E+ + G L + + +P P + R L
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A G+ +LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 115 MA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 268 YGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
Y APE + ++ DV+S G+VL +L G D+ S ++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIAL 207
E+ L+H N+VK G+ E + + L E+ + G L + + +P P + R L
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A G+ +LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 114 MA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 268 YGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
Y APE + ++ DV+S G+VL +L G D+ S ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 82 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 136
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 137 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIAL 207
E+ L+H N+VK G+ E + + L E+ + G L + + +P P + R L
Sbjct: 55 EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A G+ +LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 115 MA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
Query: 268 YGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
Y APE + ++ DV+S G+VL +L G D+ S ++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ RG + L ++
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYIT 120
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + T + GT
Sbjct: 121 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 174
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 217
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 218 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLA 214
L+H N+VK G+ E + + L E+ + G L + + +P P + R L A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 275 YVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
+ ++ DV+S G+VL +L G D+ S ++
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLA 214
L+H N+VK G+ E + + L E+ + G L + + +P P + R L A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 275 YVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
+ ++ DV+S G+VL +L G D+ S ++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIAL 207
E+ L+H N+VK G+ E + + L E+ + G L + + +P P + R L
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A G+ +LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 114 MA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 268 YGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
Y APE + ++ DV+S G+VL +L G D+ S ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIAL 207
E+ L+H N+VK G+ E + + L E+ + G L + + +P P + R L
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A G+ +LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 115 MA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 268 YGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
Y APE + ++ DV+S G+VL +L G D+ S ++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIAL 207
E+ L+H N+VK G+ E + + L E+ + G L + + +P P + R L
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A G+ +LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 115 MA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 268 YGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
Y APE + ++ DV+S G+VL +L G D+ S ++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIAL 207
E+ L+H N+VK G+ E + + L E+ + G L + + +P P + R L
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A G+ +LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 115 MA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 268 YGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
Y APE + ++ DV+S G+VL +L G D+ S ++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLA 214
L+H N+VK G+ E + + L E+ + G L + + +P P + R L A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 275 YVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
+ ++ DV+S G+VL +L G D+ S ++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLA 214
L+H N+VK G+ E + + L E+ + G L + + +P P + R L A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 275 YVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
+ ++ DV+S G+VL +L G D+ S ++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 82 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 136
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 137 RGLKYIHSAN--VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLA 214
L+H N+VK G+ E + + L E+ + G L + + +P P + R L A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 275 YVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
+ ++ DV+S G+VL +L G D+ S ++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE 216
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLA 214
L+H N+VK G+ E + + L E+ + G L + + +P P + R L A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 120 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 275 YVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
+ ++ DV+S G+VL +L G D+ S ++
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLA 214
L+H N+VK G+ E + + L E+ + G L + + +P P + R L A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 275 YVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
+ ++ DV+S G+VL +L G D+ S ++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 112/235 (47%), Gaps = 18/235 (7%)
Query: 68 DPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGS 126
+P ++P Q L +E F+ +LG G FG V+KG WI E
Sbjct: 29 EPLTPSGEAPNQALLRILKE-----TEFKKIKVLGSGAFGTVYKGLWIPEGEKV------ 77
Query: 127 GITVAVKSLK-PDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGS 185
I VA+ L+ + ++E + E + + +P++ +L+G C+ +L+ + M G
Sbjct: 78 KIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGC 136
Query: 186 LENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSD 245
L +++ + + + AKG+ +L +++RD N+L+ + + K++D
Sbjct: 137 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE--DRRLVHRDLAARNVLVKTPQHVKITD 194
Query: 246 FGLAK-AGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
FGLAK G + + H V + A E ++ T +SDV+S+GV + E++T
Sbjct: 195 FGLAKLLGAEEKEYHAEGGKVPI-KWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 66
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + A+
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAE 125
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 126 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 182
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIAL 207
E+ L+H N+VK G+ E + + L E+ + G L + + +P P + R L
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A G+ +LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT
Sbjct: 114 MA--GVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 268 YGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
Y APE + ++ DV+S G+VL +L G D+ S ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 73
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L++ + M G L +++ + + + AK
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFG AK G + + H V +
Sbjct: 133 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-KW 189
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +L G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 76
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L++ + M G L +++ + + + AK
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 136 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 192
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA++ + P Q + + + E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIRKISPFEHQTYCQRTLREIKILLRFR 83
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 84 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 71
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L++ + M G L +++ + + + AK
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ +L +++RD N+L+ + + K++DFG AK +K + + +
Sbjct: 131 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRIKIALGAAKGLA 214
L+H N+VK G+ E + + L E+ + G L + + +P P + R L A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
+LHG + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 119 YLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 275 YVMTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
+ ++ DV+S G+VL +L G D+ S ++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 145 EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
+ + E+ L + + P +V G D + + E M GSL + + + +P K
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEILGK 118
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
+++ +GLA+L + +++RD K SNIL++S KL DFG++ G D ++
Sbjct: 119 VSIAVLRGLAYLREKHQ-IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSF 173
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGR 301
VGT Y APE + H + +SD++S G+ L+E+ GR
Sbjct: 174 VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +L G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 69
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 129 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 185
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 128/283 (45%), Gaps = 33/283 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWV-AEVDFLGQLHHP 159
+G GGF V +G VA+K + + L + E++ L L H
Sbjct: 18 IGTGGFAKV---------KLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQ 68
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
++ +L ++ +V E+ G L +++ + R+ + +A++H
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVH-- 125
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM-T 278
S+ +RD K N+L D + KL DFGL A P+G+K + G+ YAAPE +
Sbjct: 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLC-AKPKGNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 279 GHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLE 338
+L S++DV+S G++L ++ G P + N++A ++ + K + + + P
Sbjct: 185 SYLGSEADVWSMGILLYVLMCGF------LPFDDDNVMALYKKIMRGKYDVPKWLSPS-- 236
Query: 339 LNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQDLN 381
S+ +Q++ Q+ DPK R SM ++ +QD N
Sbjct: 237 ---SILLLQQMLQV-------DPKKRISMKNLLNHPWIMQDYN 269
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 71
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ +L +++RD N+L+ + + K++DFG AK +K + + +
Sbjct: 131 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 71
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L++ + M G L +++ + + + AK
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFG AK G + + H V +
Sbjct: 131 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-KW 187
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +L G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 76
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFGLAK G + + H V +
Sbjct: 136 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KW 192
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFRRTIPLPWSNR--IKIALGAA 210
H N++ I D R E ++ + +E L++ SN
Sbjct: 84 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQIL 138
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T T V T
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 76
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFG AK G + + H V +
Sbjct: 136 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-KW 192
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 94 NFRPDSILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREWVAEVD 151
F+ +LG G FG V+KG WI E I VA+K L+ + ++E + E
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKV------KIPVAIKELREATSPKANKEILDEAY 69
Query: 152 FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
+ + +P++ +L+G C+ +L+ + M G L +++ + + + AK
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGY 270
G+ +L +++RD N+L+ + + K++DFG AK G + + H V +
Sbjct: 129 GMNYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-KW 185
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
A E ++ T +SDV+S+GV + E++T
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG------LQGHREWVAEVDFLG 154
+GEG +G VFK +NG G VA+K ++ L RE VA + L
Sbjct: 19 IGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLE 69
Query: 155 QLHHPNLVKLIGYCI-----EDDQRLLVYEFMTRGSLENHLFRRTIP-LPWSNRIKIALG 208
HPN+V+L C + + LV+E + + L +L + P +P +
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+GL FLH S V++RD K NIL+ S KL+DFGLA+ T VV T
Sbjct: 129 LLRGLDFLH--SHRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTL 183
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEIL 298
Y APE ++ + D++S G + E+
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 117/275 (42%), Gaps = 37/275 (13%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G FG VFKG +N T I + + + +Q E+ L Q
Sbjct: 31 IGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQ------QEITVLSQCDSSY 82
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
+ K G ++ + ++ E++ GS + L R P + KGL +LH S
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEILKGLDYLH--S 138
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGH 280
E I+RD K +N+LL + + KL+DFG+ AG D VGT + APE +
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGV--AGQLTDTQIKRNTFVGTPFWMAPEVIQQSA 196
Query: 281 LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVD---PRL 337
SK+D++S G+ +E+ G P R L+ I P L
Sbjct: 197 YDSKADIWSLGITAIELAKGEPPNSDMHPM----------------RVLFLIPKNNPPTL 240
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+++ + + CL++DP RP+ E++K
Sbjct: 241 VGDFT----KSFKEFIDACLNKDPSFRPTAKELLK 271
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 84 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 138
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T V T
Sbjct: 139 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 26/213 (12%)
Query: 99 SILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLH 157
S +GEG +G V + N + VA+K + P Q + + + E+ L +
Sbjct: 34 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 84
Query: 158 HPNLVKLIGYCIEDDQRLLVYE-----FMTRGSLENHLFR--RTIPLPWSNRIKIALGAA 210
H N++ I D R E ++ + +E L++ +T L +
Sbjct: 85 HENIIG-----INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQIL 139
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYG 269
+GL ++H + V++RD K SN+LL++ + K+ DFGLA+ A P D T V T
Sbjct: 140 RGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 270 YAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
Y APE ++ +KS D++S G +L E+L+ R
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW---VAEV 150
NF +LG+G FG V ++E G AVK LK D + + + E
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGD---------LYAVKVLKKDVILQDDDVECTMTEK 74
Query: 151 DFLGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGA 209
L +HP L +L D+ V EF+ G L H+ +++ + A
Sbjct: 75 RILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-QKSRRFDEARARFYAAEI 133
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYG 269
L FLH + +IYRD K N+LLD E + KL+DFG+ K G T + GT
Sbjct: 134 ISALMFLH--DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPD 189
Query: 270 YAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE + D ++ GV+L E+L G
Sbjct: 190 YIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 118/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 116
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P +T +S GT
Sbjct: 117 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GT 170
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 213
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 214 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 10/213 (4%)
Query: 87 ELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW 146
++KS + LGEG F V+K + T I + +S DG+ +R
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKA--RDKNTNQIVAIKKIKLGHRSEAKDGI--NRTA 59
Query: 147 VAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA 206
+ E+ L +L HPN++ L+ LV++FM LE + ++ L S+
Sbjct: 60 LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYM 118
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG 266
L +GL +LH +++RD K +N+LLD KL+DFGLAK+ G V
Sbjct: 119 LMTLQGLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXHQVV 174
Query: 267 TYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEIL 298
T Y APE + + D+++ G +L E+L
Sbjct: 175 TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + T + GT
Sbjct: 116 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGT 169
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 212
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 213 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 73
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 74 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 132
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + T + GT
Sbjct: 133 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 186
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 187 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 229
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 230 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 82
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 141
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + T + GT
Sbjct: 142 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 195
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 238
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 239 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG------LQGHREWVAEVDFLG 154
+GEG +G VFK +NG G VA+K ++ L RE VA + L
Sbjct: 19 IGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLE 69
Query: 155 QLHHPNLVKLIGYCI-----EDDQRLLVYEFMTRGSLENHLFRRTIP-LPWSNRIKIALG 208
HPN+V+L C + + LV+E + + L +L + P +P +
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+GL FLH S V++RD K NIL+ S KL+DFGLA+ T VV T
Sbjct: 129 LLRGLDFLH--SHRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTL 183
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEIL 298
Y APE ++ + D++S G + E+
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 120
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + T + GT
Sbjct: 121 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 174
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 217
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 218 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 116/285 (40%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ RG + L ++
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYIT 120
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + + GT
Sbjct: 121 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX----GT 174
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 217
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 218 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 132/320 (41%), Gaps = 52/320 (16%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH-REWVAEVDFLGQLHHP 159
+GEG +G V + T VA+K + P Q + + + E+ L + H
Sbjct: 51 IGEGAYGMVSSAYDHVRKT---------RVAIKKISPFEHQTYCQRTLREIQILLRFRHE 101
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNR--IKIALGAAKGLAFLH 217
N++ + + ++ + +E L++ SN +GL ++H
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIH 161
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK-AGPQGDKTHVSTRVVGTYGYAAPEYV 276
+ V++RD K SN+L+++ + K+ DFGLA+ A P+ D T T V T Y APE +
Sbjct: 162 SAN--VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIM 219
Query: 277 MTGHLTSKS-DVYSFGVVLLEILTGRRSMDKKR--------------PSGE--------- 312
+ +KS D++S G +L E+L+ R K PS E
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMK 279
Query: 313 -----QNL-----VAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSR--D 360
Q+L VAWA+ + K ++D L N + K + LA+ L + D
Sbjct: 280 ARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPN-KRITVEEALAHPYLEQYYD 338
Query: 361 PKSRPSMDEVVKVLTPLQDL 380
P P +E L DL
Sbjct: 339 PTDEPVAEEPFTFAMELDDL 358
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW---VAEVDFLGQL 156
+LG+G FG V + G+ A+K LK D + + + E L L
Sbjct: 26 VLGKGSFGKVMLA---------DRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 157 HHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHL-----FRRTIPLPWSNRIKIALGAA 210
P + + C + RL V E++ G L H+ F+ + ++ I I
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI----- 131
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR-VVGTYG 269
GL FLH +IYRD K N++LDSE + K++DFG+ K + V+TR GT
Sbjct: 132 -GLFFLH--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFCGTPD 185
Query: 270 YAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMD 305
Y APE + D +++GV+L E+L G+ D
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALG 208
EV+ L +L HPN++KL + +V E T G L + + +R + +I
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQ 129
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDS---EYNAKLSDFGLAKAGPQGDKTHVSTRVV 265
G+ ++H + +++RD K NILL+S + + K+ DFGL+ Q T + R +
Sbjct: 130 VFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDR-I 184
Query: 266 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GT Y APE V+ G K DV+S GV+L +L+G
Sbjct: 185 GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 106/250 (42%), Gaps = 23/250 (9%)
Query: 60 AHLSSDNPDPAPTDEKSPCQLLQFTFQELKSATGNFRPD-SILGEGGFGYVFKGWIEENG 118
AHL P D K + LQ+ + E + ++ D +LG GGFG VF ++ G
Sbjct: 152 AHLGQ-APFQEFLDSKYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATG 210
Query: 119 TAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRL-LV 177
A + K G QG + E L ++H +V L Y E L LV
Sbjct: 211 KLYA---CKKLNKKRLKKRKGYQGA---MVEKKILAKVHSRFIVSL-AYAFETKTDLCLV 263
Query: 178 YEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK---GLAFLHGGSEPVIYRDFKTSNIL 234
M G + H++ P + A+ GL LH +IYRD K N+L
Sbjct: 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH--QRNIIYRDLKPENVL 321
Query: 235 LDSEYNAKLSDFGLA---KAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFG 291
LD + N ++SD GLA KAG K + GT G+ APE ++ D ++ G
Sbjct: 322 LDDDGNVRISDLGLAVELKAGQTKTKGY-----AGTPGFMAPELLLGEEYDFSVDYFALG 376
Query: 292 VVLLEILTGR 301
V L E++ R
Sbjct: 377 VTLYEMIAAR 386
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 120
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + T + GT
Sbjct: 121 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 174
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 217
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 218 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 29/222 (13%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK-PDGLQGHREW--- 146
AT + P + +G G +G V+K P SG VA+KS++ P+G G
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKA---------RDPHSGHFVALKSVRVPNGGGGGGGLPIS 57
Query: 147 -VAEVDFLGQLH---HPNLVKLIGYCI--EDDQRL---LVYEFMTRGSLENHLFRRTIP- 196
V EV L +L HPN+V+L+ C D+ + LV+E + + L +L + P
Sbjct: 58 TVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG 116
Query: 197 LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD 256
LP + +GL FLH +++RD K NIL+ S KL+DFGLA+
Sbjct: 117 LPAETIKDLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARI---YS 171
Query: 257 KTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEIL 298
T VV T Y APE ++ + D++S G + E+
Sbjct: 172 YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 96/210 (45%), Gaps = 27/210 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDG------LQGHREWVAEVDFLG 154
+GEG +G VFK +NG G VA+K ++ L RE VA + L
Sbjct: 19 IGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLE 69
Query: 155 QLHHPNLVKLIGYCI-----EDDQRLLVYEFMTRGSLENHLFRRTIP-LPWSNRIKIALG 208
HPN+V+L C + + LV+E + + L +L + P +P +
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+GL FLH S V++RD K NIL+ S KL+DFGLA+ T VV T
Sbjct: 129 LLRGLDFLH--SHRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTSVVVTL 183
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEIL 298
Y APE ++ + D++S G + E+
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 116
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P +T + GT
Sbjct: 117 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD----LCGT 170
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 213
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 214 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + T + GT
Sbjct: 119 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 172
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 215
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 216 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALG 208
EV+ L +L HPN++KL + +V E T G L + + +R + +I
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQ 129
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDS---EYNAKLSDFGLAKAGPQGDKTHVSTRVV 265
G+ ++H + +++RD K NILL+S + + K+ DFGL+ Q T + R +
Sbjct: 130 VFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDR-I 184
Query: 266 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GT Y APE V+ G K DV+S GV+L +L+G
Sbjct: 185 GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + T + GT
Sbjct: 116 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 169
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 212
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 213 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P +T + GT
Sbjct: 116 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD----LCGT 169
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 212
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 213 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 61
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 120
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P +T + GT
Sbjct: 121 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD----LCGT 174
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 217
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 218 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALG 208
EV+ L +L HPN++KL + +V E T G L + + +R + +I
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQ 129
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDS---EYNAKLSDFGLAKAGPQGDKTHVSTRVV 265
G+ ++H + +++RD K NILL+S + + K+ DFGL+ Q T + R +
Sbjct: 130 VFSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDR-I 184
Query: 266 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GT Y APE V+ G K DV+S GV+L +L+G
Sbjct: 185 GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P +T + GT
Sbjct: 116 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD----LCGT 169
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 212
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 213 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 36/230 (15%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-EVDF 152
+F P LG GGFG VF+ A+K ++ + RE V EV
Sbjct: 6 DFEPIQCLGRGGFGVVFEA---------KNKVDDCNYAIKRIRLPNRELAREKVMREVKA 56
Query: 153 LGQLHHPNLVKLIGYCIEDD--QRLLVYEFMTRGSLENHLFRRTIPLPWSNR-------- 202
L +L HP +V+ +E + ++L ++ L R+ W N
Sbjct: 57 LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116
Query: 203 ----IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKT 258
+ I L A+ + FLH S+ +++RD K SNI + K+ DFGL A Q ++
Sbjct: 117 RSVCLHIFLQIAEAVEFLH--SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 259 HV----------STRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEIL 298
T VGT Y +PE + + K D++S G++L E+L
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + T + GT
Sbjct: 116 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCGT 169
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 212
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 213 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 55
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 56 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 114
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + T + GT
Sbjct: 115 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 168
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 169 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 211
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 212 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + T + GT
Sbjct: 119 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 172
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 215
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 216 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 34/231 (14%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSL-------ENHLFRRTIPLPWSN 201
EV L + HPN+V+ E+ +V ++ G L + LF+ L W
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 202 RIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVS 261
+I +AL H +++RD K+ NI L + +L DFG+A+ ++
Sbjct: 133 QICLALK--------HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELA 182
Query: 262 TRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQ 321
+GT Y +PE +KSD+++ G VL E+ T + + + +NLV
Sbjct: 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE---AGSMKNLVL---- 235
Query: 322 YLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
K+ P + L+YS VSQL R+P+ RPS++ +++
Sbjct: 236 ------KIISGSFPPVSLHYSYDLRSLVSQL----FKRNPRDRPSVNSILE 276
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 60
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 119
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + T + GT
Sbjct: 120 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGT 173
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 216
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 217 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+LG GGFG VF ++ G A + K G QG + E L ++H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYA---CKKLNKKRLKKRKGYQGA---MVEKKILAKVHSR 245
Query: 160 NLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK---GLAF 215
+V L Y E L LV M G + H++ P + A+ GL
Sbjct: 246 FIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA---KAGPQGDKTHVSTRVVGTYGYAA 272
LH +IYRD K N+LLD + N ++SD GLA KAG K + GT G+ A
Sbjct: 305 LH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY-----AGTPGFMA 357
Query: 273 PEYVMTGHLTSKSDVYSFGVVLLEILTGR 301
PE ++ D ++ GV L E++ R
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+LG GGFG VF ++ G A + K G QG + E L ++H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYA---CKKLNKKRLKKRKGYQGA---MVEKKILAKVHSR 245
Query: 160 NLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK---GLAF 215
+V L Y E L LV M G + H++ P + A+ GL
Sbjct: 246 FIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA---KAGPQGDKTHVSTRVVGTYGYAA 272
LH +IYRD K N+LLD + N ++SD GLA KAG K + GT G+ A
Sbjct: 305 LH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY-----AGTPGFMA 357
Query: 273 PEYVMTGHLTSKSDVYSFGVVLLEILTGR 301
PE ++ D ++ GV L E++ R
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+LG GGFG VF ++ G A + K G QG + E L ++H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYA---CKKLNKKRLKKRKGYQGA---MVEKKILAKVHSR 245
Query: 160 NLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK---GLAF 215
+V L Y E L LV M G + H++ P + A+ GL
Sbjct: 246 FIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA---KAGPQGDKTHVSTRVVGTYGYAA 272
LH +IYRD K N+LLD + N ++SD GLA KAG K + GT G+ A
Sbjct: 305 LH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY-----AGTPGFMA 357
Query: 273 PEYVMTGHLTSKSDVYSFGVVLLEILTGR 301
PE ++ D ++ GV L E++ R
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 111/280 (39%), Gaps = 37/280 (13%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW-- 146
K +F +LG+G FG V + E T G A+K L+ + + E
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 54
Query: 147 -VAEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
V E L HP L L Y + RL V E+ G L HL R + R
Sbjct: 55 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 113
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
A L +LH S V+YRD K N++LD + + K++DFGL K G T +
Sbjct: 114 GA-EIVSALEYLH--SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--F 168
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 324
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 169 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 211
Query: 325 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
D +L++++ E+ + + L L +DPK R
Sbjct: 212 DHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 250
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
ILG G FG V K EE T G+ +A K +K G++ E E+ + QL H
Sbjct: 96 ILGGGRFGQVHK--CEETAT-------GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
NL++L + +LV E++ G L + + + L + I +G+ +H
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH-- 204
Query: 220 SEPVIYRDFKTSNILLDSE--YNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM 277
+++ D K NIL + K+ DFGLA+ +K V+ GT + APE V
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEVVN 261
Query: 278 TGHLTSKSDVYSFGVVLLEILTG 300
++ +D++S GV+ +L+G
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 128 ITVAVKSLKPDGLQGHREWVA-EVDFLGQLH-HPNLVKLIGYCIEDDQRLLVYEFMTRGS 185
+ V + L P+ L+ RE E L Q+ HP+++ LI LV++ M +G
Sbjct: 127 MEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGE 186
Query: 186 LENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSD 245
L ++L + + L I + ++FLH + +++RD K NILLD +LSD
Sbjct: 187 LFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANN--IVHRDLKPENILLDDNMQIRLSD 243
Query: 246 FGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTS------KSDVYSFGVVLLEILT 299
FG + G+K + GT GY APE + + + D+++ GV+L +L
Sbjct: 244 FGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA 300
Query: 300 G 300
G
Sbjct: 301 G 301
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 36/217 (16%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLG--QLHH 158
+G+G FG V++G G VAVK + R W E + L H
Sbjct: 11 IGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRH 56
Query: 159 PNLVKLIGYCIEDD----QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
N++ I +D+ Q LV ++ GSL ++L R T+ + IK+AL A GLA
Sbjct: 57 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV--EGMIKLALSTASGLA 114
Query: 215 FLH------GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVS-TRVVG 266
LH G + +RD K+ NIL+ ++D GLA + D ++ VG
Sbjct: 115 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 174
Query: 267 TYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEI 297
T Y APE + H S ++D+Y+ G+V EI
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 36/217 (16%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLG--QLHH 158
+G+G FG V++G G VAVK + R W E + L H
Sbjct: 12 IGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRH 57
Query: 159 PNLVKLIGYCIEDD----QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
N++ I +D+ Q LV ++ GSL ++L R T+ + IK+AL A GLA
Sbjct: 58 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV--EGMIKLALSTASGLA 115
Query: 215 FLH------GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVS-TRVVG 266
LH G + +RD K+ NIL+ ++D GLA + D ++ VG
Sbjct: 116 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 175
Query: 267 TYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEI 297
T Y APE + H S ++D+Y+ G+V EI
Sbjct: 176 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 110/280 (39%), Gaps = 37/280 (13%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW-- 146
K +F +LG+G FG V + E T G A+K L+ + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 147 -VAEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
V E L HP L L Y + RL V E+ G L HL R + R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
A L +LH S V+YRD K N++LD + + K++DFGL K G T
Sbjct: 111 GA-EIVSALEYLH--SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 324
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 208
Query: 325 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
D +L++++ E+ + + L L +DPK R
Sbjct: 209 DHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 111/280 (39%), Gaps = 37/280 (13%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW-- 146
K +F +LG+G FG V + E T G A+K L+ + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 147 -VAEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
V E L HP L L Y + RL V E+ G L HL R + R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
A L +LH S V+YRD K N++LD + + K++DFGL K G T +
Sbjct: 111 GA-EIVSALEYLH--SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--F 165
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 324
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 208
Query: 325 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
D +L++++ E+ + + L L +DPK R
Sbjct: 209 DHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 44/279 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+GEG G V + SG VAVK + Q EV + H N
Sbjct: 159 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA---LGAAKGLAFLH 217
+V++ + D+ +V EF+ G+L + + + N +IA L + L+ LH
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRM-----NEEQIAAVCLAVLQALSVLH 264
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFG----LAKAGPQGDKTHVSTRVVGTYGYAAP 273
++ VI+RD K+ +ILL + KLSDFG ++K P+ +VGT + AP
Sbjct: 265 --AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPYWMAP 316
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + D++S G++++E++ G + P ++ R L + K V
Sbjct: 317 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKV 373
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
P SLKG L RDP R + E++K
Sbjct: 374 SP------SLKG------FLDRLLVRDPAQRATAAELLK 400
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 117
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K+++FG + P + T + GT
Sbjct: 118 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGT 171
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 214
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 215 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 111/280 (39%), Gaps = 37/280 (13%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW-- 146
K +F +LG+G FG V + E T G A+K L+ + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 147 -VAEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
V E L HP L L Y + RL V E+ G L HL R + R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
A L +LH S V+YRD K N++LD + + K++DFGL K G T +
Sbjct: 111 GA-EIVSALEYLH--SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--F 165
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 324
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 208
Query: 325 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
D +L++++ E+ + + L L +DPK R
Sbjct: 209 DHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE---WVAEVDFLGQL 156
+LG+G FG V + G+ AVK LK D + + + E L
Sbjct: 348 VLGKGSFGKVM---------LSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 398
Query: 157 HHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
P + + C + RL V E++ G L H+ ++ + + A A GL F
Sbjct: 399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI-QQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEY 275
L S+ +IYRD K N++LDSE + K++DFG+ K T + GT Y APE
Sbjct: 458 LQ--SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEI 513
Query: 276 VMTGHLTSKSDVYSFGVVLLEILTGR 301
+ D ++FGV+L E+L G+
Sbjct: 514 IAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVA-EV 150
+F+ ILGEG F V + + A+K L+ + + +V E
Sbjct: 38 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 88
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNRIK 204
D + +L HP VKL +C +DD++L + G L ++ F T ++ I
Sbjct: 89 DVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI- 146
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 147 -----VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 199
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 200 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 36/217 (16%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLG--QLHH 158
+G+G FG V++G G VAVK + R W E + L H
Sbjct: 17 IGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRH 62
Query: 159 PNLVKLIGYCIEDD----QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
N++ I +D+ Q LV ++ GSL ++L R T+ + IK+AL A GLA
Sbjct: 63 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV--EGMIKLALSTASGLA 120
Query: 215 FLH------GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVS-TRVVG 266
LH G + +RD K+ NIL+ ++D GLA + D ++ VG
Sbjct: 121 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 180
Query: 267 TYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEI 297
T Y APE + H S ++D+Y+ G+V EI
Sbjct: 181 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 110/280 (39%), Gaps = 37/280 (13%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW-- 146
K +F +LG+G FG V + E T G A+K L+ + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 147 -VAEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
V E L HP L L Y + RL V E+ G L HL R + R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
A L +LH S V+YRD K N++LD + + K++DFGL K G T
Sbjct: 111 GA-EIVSALEYLH--SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 324
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 208
Query: 325 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
D +L++++ E+ + + L L +DPK R
Sbjct: 209 DHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 36/217 (16%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLG--QLHH 158
+G+G FG V++G G VAVK + R W E + L H
Sbjct: 37 IGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRH 82
Query: 159 PNLVKLIGYCIEDD----QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
N++ I +D+ Q LV ++ GSL ++L R T+ + IK+AL A GLA
Sbjct: 83 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV--EGMIKLALSTASGLA 140
Query: 215 FLH------GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVS-TRVVG 266
LH G + +RD K+ NIL+ ++D GLA + D ++ VG
Sbjct: 141 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 200
Query: 267 TYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEI 297
T Y APE + H S ++D+Y+ G+V EI
Sbjct: 201 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPA-KPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
++ +LG+G FG V + G A K S V K+ K L+ EV L
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-------EVQLL 80
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
QL HPN++KL + + LV E T G L + + R + +I G+
Sbjct: 81 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGI 139
Query: 214 AFLHGGSEPVIYRDFKTSNILLDS---EYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
++H +++RD K N+LL+S + N ++ DFGL+ K +GT Y
Sbjct: 140 TYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYY 194
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V+ G K DV+S GV+L +L+G
Sbjct: 195 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 115/285 (40%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKNSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + + GT
Sbjct: 116 ELANALSYCH--SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGT 169
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 212
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
Y+ + R+E + + L L +P RP + EV++
Sbjct: 213 DTYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 58
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 117
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + + GT
Sbjct: 118 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGT 171
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 214
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 215 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 110/280 (39%), Gaps = 37/280 (13%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW-- 146
K +F +LG+G FG V + E T G A+K L+ + + E
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 56
Query: 147 -VAEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
V E L HP L L Y + RL V E+ G L HL R + R
Sbjct: 57 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 115
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
A L +LH S V+YRD K N++LD + + K++DFGL K G T
Sbjct: 116 GA-EIVSALEYLH--SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 170
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 324
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 213
Query: 325 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
D +L++++ E+ + + L L +DPK R
Sbjct: 214 DHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 252
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 36/217 (16%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLG--QLHH 158
+G+G FG V++G G VAVK + R W E + L H
Sbjct: 14 IGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRH 59
Query: 159 PNLVKLIGYCIEDD----QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
N++ I +D+ Q LV ++ GSL ++L R T+ + IK+AL A GLA
Sbjct: 60 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV--EGMIKLALSTASGLA 117
Query: 215 FLH------GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVS-TRVVG 266
LH G + +RD K+ NIL+ ++D GLA + D ++ VG
Sbjct: 118 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 177
Query: 267 TYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEI 297
T Y APE + H S ++D+Y+ G+V EI
Sbjct: 178 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 36/217 (16%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLG--QLHH 158
+G+G FG V++G G VAVK + R W E + L H
Sbjct: 50 IGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRH 95
Query: 159 PNLVKLIGYCIEDD----QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
N++ I +D+ Q LV ++ GSL ++L R T+ + IK+AL A GLA
Sbjct: 96 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV--EGMIKLALSTASGLA 153
Query: 215 FLH------GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVS-TRVVG 266
LH G + +RD K+ NIL+ ++D GLA + D ++ VG
Sbjct: 154 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 213
Query: 267 TYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEI 297
T Y APE + H S ++D+Y+ G+V EI
Sbjct: 214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 113/239 (47%), Gaps = 48/239 (20%)
Query: 93 GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
G+ + I G FG V+K + + VAVK LQ + W +E +
Sbjct: 15 GSLQLLEIKARGRFGCVWKAQLMND-----------FVAVKIFP---LQDKQSWQSEREI 60
Query: 153 LGQ--LHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKI 205
+ H NL++ I G +E + L+ F +GSL ++L I W+ +
Sbjct: 61 FSTPGMKHENLLQFIAAEKRGSNLEV-ELWLITAFHDKGSLTDYLKGNIIT--WNELCHV 117
Query: 206 ALGAAKGLAFLHG--------GSEPVI-YRDFKTSNILLDSEYNAKLSDFGLA----KAG 252
A ++GL++LH G +P I +RDFK+ N+LL S+ A L+DFGLA
Sbjct: 118 AETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGK 177
Query: 253 PQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS------DVYSFGVVLLEILTGRRSMD 305
P GD TH VGT Y APE V+ G + + D+Y+ G+VL E+++ ++ D
Sbjct: 178 PPGD-THGQ---VGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 82
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 141
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + + GT
Sbjct: 142 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD----LCGT 195
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 238
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 239 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 57
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 116
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + + GT
Sbjct: 117 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLCGT 170
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 213
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 214 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + + GT
Sbjct: 119 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGT 172
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 215
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 216 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 110/280 (39%), Gaps = 37/280 (13%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW-- 146
K +F +LG+G FG V + E T G A+K L+ + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 147 -VAEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
V E L HP L L Y + RL V E+ G L HL R + R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
A L +LH S V+YRD K N++LD + + K++DFGL K G T
Sbjct: 111 GA-EIVSALEYLH--SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXF 165
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 324
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 166 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQ 208
Query: 325 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
D +L++++ E+ + + L L +DPK R
Sbjct: 209 DHERLFELILME-EIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPA-KPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
++ +LG+G FG V + G A K S V K+ K L+ EV L
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-------EVQLL 103
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
QL HPN++KL + + LV E T G L + + R + +I G+
Sbjct: 104 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGI 162
Query: 214 AFLHGGSEPVIYRDFKTSNILLDS---EYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
++H +++RD K N+LL+S + N ++ DFGL+ K +GT Y
Sbjct: 163 TYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYY 217
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V+ G K DV+S GV+L +L+G
Sbjct: 218 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPA-KPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
++ +LG+G FG V + G A K S V K+ K L+ EV L
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-------EVQLL 86
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
QL HPN++KL + + LV E T G L + + R + +I G+
Sbjct: 87 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGI 145
Query: 214 AFLHGGSEPVIYRDFKTSNILLDS---EYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
++H +++RD K N+LL+S + N ++ DFGL+ K +GT Y
Sbjct: 146 TYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYY 200
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V+ G K DV+S GV+L +L+G
Sbjct: 201 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 117/285 (41%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K+++FG + P + T + GT
Sbjct: 119 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGT 172
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 215
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 216 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+GEG G V + +G VAVK + Q EV + HH N
Sbjct: 53 IGEGSTGIV---------CIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN 103
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA---LGAAKGLAFLH 217
+V + + D+ +V EF+ G+L + + + N +IA L + L++LH
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRM-----NEEQIATVCLSVLRALSYLH 158
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGL-AKAGPQGDKTHVSTRVVGTYGYAAPEYV 276
++ VI+RD K+ +ILL S+ KLSDFG A+ + K +VGT + APE +
Sbjct: 159 --NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK---RKXLVGTPYWMAPEVI 213
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D++S G++++E++ G
Sbjct: 214 SRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 18/210 (8%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPA-KPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
++ +LG+G FG V + G A K S V K+ K L+ EV L
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-------EVQLL 104
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
QL HPN++KL + + LV E T G L + + R + +I G+
Sbjct: 105 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGI 163
Query: 214 AFLHGGSEPVIYRDFKTSNILLDS---EYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
++H +++RD K N+LL+S + N ++ DFGL+ K +GT Y
Sbjct: 164 TYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYY 218
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V+ G K DV+S GV+L +L+G
Sbjct: 219 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 124/278 (44%), Gaps = 41/278 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-EVDFLGQLHH 158
LG+GGF F+ I + T G + ++ LKP RE ++ E+ L H
Sbjct: 46 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSL-LLKPH----QREKMSMEISIHRSLAH 98
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSL-ENHLFRRTIPLPWSNRI--KIALGAAKGLAF 215
++V G+ ++D +V E R SL E H R+ + P + +I LG +
Sbjct: 99 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----Y 154
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVSTRVVGTYGYAAPE 274
LH VI+RD K N+ L+ + K+ DFGLA K G++ V + GT Y APE
Sbjct: 155 LHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPE 209
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVD 334
+ + + DV+S G ++ +L G +P E + YL K+ Y I
Sbjct: 210 VLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETS--CLKETYLRIKKNEYSIP- 259
Query: 335 PRLELNYSLKGVQKV-SQLAYNCLSRDPKSRPSMDEVV 371
K + V + L L DP +RP+++E++
Sbjct: 260 ---------KHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 132/318 (41%), Gaps = 58/318 (18%)
Query: 76 SPCQLL-QFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKS 134
SP + L + L+ G F ++G G +G V+KG +G A+K
Sbjct: 6 SPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG---------RHVKTGQLAAIKV 56
Query: 135 LKPDGLQGHREWVAEVDFLGQL-HHPNLVKLIGYCIE------DDQRLLVYEFMTRGSLE 187
+ G + E E++ L + HH N+ G I+ DDQ LV EF GS+
Sbjct: 57 MDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVT 115
Query: 188 NHLFR---RTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLS 244
+ + T+ W I +GL+ LH VI+RD K N+LL KL
Sbjct: 116 DLIKNTKGNTLKEEWIAYI--CREILRGLSHLH--QHKVIHRDIKGQNVLLTENAEVKLV 171
Query: 245 DFGLAKAGPQGDKTHVSTR--VVGTYGYAAPEYVMTGH-----LTSKSDVYSFGVVLLEI 297
DFG++ Q D+T V R +GT + APE + KSD++S G+ +E+
Sbjct: 172 DFGVS---AQLDRT-VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
Query: 298 LTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVD---PRLELNYSLKGVQKVSQLAY 354
G + P R L+ I PRL+ S K +K
Sbjct: 228 AEGAPPLCDMHPM----------------RALFLIPRNPAPRLK---SKKWSKKFQSFIE 268
Query: 355 NCLSRDPKSRPSMDEVVK 372
+CL ++ RP+ ++++K
Sbjct: 269 SCLVKNHSQRPATEQLMK 286
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 176 LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILL 235
+V E++ +L + + P+ I++ A + L F H +I+RD K +NIL+
Sbjct: 93 IVMEYVDGVTLRD-IVHTEGPMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANILI 149
Query: 236 DSEYNAKLSDFGLAKA-GPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVL 294
+ K+ DFG+A+A G+ + V+GT Y +PE + ++SDVYS G VL
Sbjct: 150 SATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 295 LEILTG 300
E+LTG
Sbjct: 210 YEVLTG 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 130 VAVKSLKPDGLQG---HREWVAEVDFLGQLHHPNLVKLIGYCIEDDQR------LLVYEF 180
VAVK L+ D + + + E L+HP +V + Y + + +V E+
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEY 97
Query: 181 MTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN 240
+ +L + + P+ I++ A + L F H +I+RD K +NI++ +
Sbjct: 98 VDGVTLRD-IVHTEGPMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNA 154
Query: 241 AKLSDFGLAKA-GPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
K+ DFG+A+A G+ + V+GT Y +PE + ++SDVYS G VL E+LT
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 300 G 300
G
Sbjct: 215 G 215
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 124/278 (44%), Gaps = 41/278 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-EVDFLGQLHH 158
LG+GGF F+ I + T G + ++ LKP RE ++ E+ L H
Sbjct: 48 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSL-LLKPH----QREKMSMEISIHRSLAH 100
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSL-ENHLFRRTIPLPWSNRI--KIALGAAKGLAF 215
++V G+ ++D +V E R SL E H R+ + P + +I LG +
Sbjct: 101 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----Y 156
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVSTRVVGTYGYAAPE 274
LH VI+RD K N+ L+ + K+ DFGLA K G++ V + GT Y APE
Sbjct: 157 LHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPE 211
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVD 334
+ + + DV+S G ++ +L G +P E + YL K+ Y I
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETS--CLKETYLRIKKNEYSIP- 261
Query: 335 PRLELNYSLKGVQKV-SQLAYNCLSRDPKSRPSMDEVV 371
K + V + L L DP +RP+++E++
Sbjct: 262 ---------KHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 121/301 (40%), Gaps = 61/301 (20%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
+F+ ++G GGFG VFK G T +K +K + + RE V L
Sbjct: 12 DFKEIELIGSGGFGQVFKA---------KHRIDGKTYVIKRVKYNNEKAERE----VKAL 58
Query: 154 GQLHHPNLVKLIG------YCIEDDQR----------LLVYEFMTRGSLENHLF-RRTIP 196
+L H N+V G Y E + + EF +G+LE + RR
Sbjct: 59 AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118
Query: 197 LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD 256
L +++ KG+ ++H S+ +I RD K SNI L K+ DFGL +
Sbjct: 119 LDKVLALELFEQITKGVDYIH--SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 176
Query: 257 KTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLV 316
K R GT Y +PE + + + D+Y+ G++L E+L +
Sbjct: 177 K---RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHV------------CDTA 221
Query: 317 AWARQYLADKRK--LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVL 374
++ D R + I D +K L LS+ P+ RP+ E+++ L
Sbjct: 222 FETSKFFTDLRDGIISDIFD------------KKEKTLLQKLLSKKPEDRPNTSEILRTL 269
Query: 375 T 375
T
Sbjct: 270 T 270
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 120/283 (42%), Gaps = 33/283 (11%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKS-LKPDGLQGHREWVAE 149
A +F LG+G FG V+ ++ A + V K+ L+ G++ + E
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILA-----LKVLFKAQLEKAGVE--HQLRRE 55
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGA 209
V+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 56 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITEL 114
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYG 269
A L++ H S+ VI+RD K N+LL S K++DFG + P + T + GT
Sbjct: 115 ANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLD 168
Query: 270 YAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKL 329
Y PE + K D++S GV+ E L G +P E N ++
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN----------TYQET 211
Query: 330 YQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
Y+ + R+E + + L L +P RP + EV++
Sbjct: 212 YKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + + GT
Sbjct: 116 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGT 169
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 212
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 213 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA 148
+ G++ LG G FG V G E G VAVK L +R+ +
Sbjct: 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHK---------VAVKIL-------NRQKIR 55
Query: 149 EVDFLGQLH----------HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP 198
+D +G++ HP+++KL +V E+++ G L +++ + L
Sbjct: 56 SLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG-RLD 114
Query: 199 WSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKT 258
++ G+ + H V++RD K N+LLD+ NAK++DFGL+ G+
Sbjct: 115 EKESRRLFQQILSGVDYCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL 172
Query: 259 HVSTRVVGTYGYAAPEYVMTGHLTS--KSDVYSFGVVLLEILTGRRSMD 305
S G+ YAAPE V++G L + + D++S GV+L +L G D
Sbjct: 173 RXSC---GSPNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G G V+ +G VA++ + + E+ + + +PN
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
+V + + D+ +V E++ GSL + + + + + L FLH S
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLH--S 134
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGL-AKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
VI+RD K+ NILL + + KL+DFG A+ P+ K + +VGT + APE V
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVVTRK 191
Query: 280 HLTSKSDVYSFGVVLLEILTGR 301
K D++S G++ +E++ G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 44/279 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+GEG G V + SG VAVK + Q EV + H N
Sbjct: 37 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA---LGAAKGLAFLH 217
+V++ + D+ +V EF+ G+L + + + N +IA L + L+ LH
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRM-----NEEQIAAVCLAVLQALSVLH 142
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFG----LAKAGPQGDKTHVSTRVVGTYGYAAP 273
++ VI+RD K+ +ILL + KLSDFG ++K P+ +VGT + AP
Sbjct: 143 --AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPYWMAP 194
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + D++S G++++E++ G + P ++ R L + K V
Sbjct: 195 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKV 251
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
P SLKG L RDP R + E++K
Sbjct: 252 SP------SLKG------FLDRLLVRDPAQRATAAELLK 278
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW---VAEVDFLGQL 156
+LG+G FG V + G+ AVK LK D + + + E L
Sbjct: 27 VLGKGSFGKV---------MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 77
Query: 157 HHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
P + + C + RL V E++ G L H+ ++ + + A A GL F
Sbjct: 78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI-QQVGRFKEPHAVFYAAEIAIGLFF 136
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEY 275
L S+ +IYRD K N++LDSE + K++DFG+ K T + GT Y APE
Sbjct: 137 LQ--SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEI 192
Query: 276 VMTGHLTSKSDVYSFGVVLLEILTGR 301
+ D ++FGV+L E+L G+
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 120/292 (41%), Gaps = 43/292 (14%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G G V+ +G VA++ + + E+ + + +PN
Sbjct: 29 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
+V + + D+ +V E++ GSL + + + + + L FLH S
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLH--S 135
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGL-AKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
VI+RD K+ NILL + + KL+DFG A+ P+ K + +VGT + APE V
Sbjct: 136 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRK 192
Query: 280 HLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV---DPR 336
K D++S G++ +E++ G + P R LY I P
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----------------RALYLIATNGTPE 236
Query: 337 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV-----KVLTPLQDLNDL 383
L+ L + + CL D + R S E++ K+ PL L L
Sbjct: 237 LQNPEKLSAIFR--DFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTPL 286
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 44/279 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+GEG G V + SG VAVK + Q EV + H N
Sbjct: 39 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA---LGAAKGLAFLH 217
+V++ + D+ +V EF+ G+L + + + N +IA L + L+ LH
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRM-----NEEQIAAVCLAVLQALSVLH 144
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFG----LAKAGPQGDKTHVSTRVVGTYGYAAP 273
++ VI+RD K+ +ILL + KLSDFG ++K P+ +VGT + AP
Sbjct: 145 --AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPYWMAP 196
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + D++S G++++E++ G + P ++ R L + K V
Sbjct: 197 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKV 253
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
P SLKG L RDP R + E++K
Sbjct: 254 SP------SLKG------FLDRLLVRDPAQRATAAELLK 280
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + + GT
Sbjct: 119 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGT 172
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 215
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 216 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + + GT
Sbjct: 116 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLCGT 169
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 212
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 213 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 44/279 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+GEG G V + SG VAVK + Q EV + H N
Sbjct: 82 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA---LGAAKGLAFLH 217
+V++ + D+ +V EF+ G+L + + + N +IA L + L+ LH
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRM-----NEEQIAAVCLAVLQALSVLH 187
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFG----LAKAGPQGDKTHVSTRVVGTYGYAAP 273
++ VI+RD K+ +ILL + KLSDFG ++K P+ +VGT + AP
Sbjct: 188 --AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPYWMAP 239
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + D++S G++++E++ G + P ++ R L + K V
Sbjct: 240 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKV 296
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
P SLKG L RDP R + E++K
Sbjct: 297 SP------SLKG------FLDRLLVRDPAQRATAAELLK 323
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 124/278 (44%), Gaps = 41/278 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-EVDFLGQLHH 158
LG+GGF F+ I + T G + ++ LKP RE ++ E+ L H
Sbjct: 22 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSL-LLKPH----QREKMSMEISIHRSLAH 74
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSL-ENHLFRRTIPLPWSNRI--KIALGAAKGLAF 215
++V G+ ++D +V E R SL E H R+ + P + +I LG +
Sbjct: 75 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----Y 130
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVSTRVVGTYGYAAPE 274
LH VI+RD K N+ L+ + K+ DFGLA K G++ V + GT Y APE
Sbjct: 131 LHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPE 185
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVD 334
+ + + DV+S G ++ +L G +P E + YL K+ Y I
Sbjct: 186 VLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETS--CLKETYLRIKKNEYSIP- 235
Query: 335 PRLELNYSLKGVQKV-SQLAYNCLSRDPKSRPSMDEVV 371
K + V + L L DP +RP+++E++
Sbjct: 236 ---------KHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 92/191 (48%), Gaps = 32/191 (16%)
Query: 130 VAVKSLKPDGLQGHREWVAEVDF--LGQLHHPNLVKLIGY----CIEDDQRLLVYEFMTR 183
VAVK +Q + W E + L + H N+++ IG D L+ F +
Sbjct: 50 VAVKIFP---IQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106
Query: 184 GSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH-------GGSEPVI-YRDFKTSNILL 235
GSL + F + + W+ IA A+GLA+LH G +P I +RD K+ N+LL
Sbjct: 107 GSLSD--FLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL 164
Query: 236 DSEYNAKLSDFGLA---KAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS------D 286
+ A ++DFGLA +AG TH VGT Y APE V+ G + + D
Sbjct: 165 KNNLTACIADFGLALKFEAGKSAGDTHGQ---VGTRRYMAPE-VLEGAINFQRDAFLRID 220
Query: 287 VYSFGVVLLEI 297
+Y+ G+VL E+
Sbjct: 221 MYAMGLVLWEL 231
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 147 VAEVDFLGQLHHPNLVKLIGYCIEDDQRLL--VYEF---------MTRGSLENHLFRRTI 195
V+EV+ L +L HPN+V+ I+ L V E+ +T+G+ E
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 196 PLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQG 255
L ++ +AL + G V++RD K +N+ LD + N KL DFGLA+
Sbjct: 113 VLRVMTQLTLALKECHRRS---DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LN 167
Query: 256 DKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEI 297
T + VGT Y +PE + KSD++S G +L E+
Sbjct: 168 HDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G G V+ +G VA++ + + E+ + + +PN
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
+V + + D+ +V E++ GSL + + + + + L FLH S
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLH--S 134
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGL-AKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
VI+RD K+ NILL + + KL+DFG A+ P+ K + +VGT + APE V
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRK 191
Query: 280 HLTSKSDVYSFGVVLLEILTGR 301
K D++S G++ +E++ G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G G V+ +G VA++ + + E+ + + +PN
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
+V + + D+ +V E++ GSL + + + + + L FLH S
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLH--S 134
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGL-AKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
VI+RD K+ NILL + + KL+DFG A+ P+ K + +VGT + APE V
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRK 191
Query: 280 HLTSKSDVYSFGVVLLEILTGR 301
K D++S G++ +E++ G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 147 VAEVDFLGQLHHPNLVKLIGYCIE--DDQRLLVYEF---------MTRGSLENHLFRRTI 195
V+EV+ L +L HPN+V+ I+ + +V E+ +T+G+ E
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 196 PLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQG 255
L ++ +AL + G V++RD K +N+ LD + N KL DFGLA+
Sbjct: 113 VLRVMTQLTLALKECHRRS---DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LN 167
Query: 256 DKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEI 297
T + VGT Y +PE + KSD++S G +L E+
Sbjct: 168 HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 176 LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILL 235
+V E++ +L + + P+ I++ A + L F H +I+RD K +NI++
Sbjct: 93 IVMEYVDGVTLRD-IVHTEGPMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMI 149
Query: 236 DSEYNAKLSDFGLAKA-GPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVL 294
+ K+ DFG+A+A G+ + V+GT Y +PE + ++SDVYS G VL
Sbjct: 150 SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209
Query: 295 LEILTG 300
E+LTG
Sbjct: 210 YEVLTG 215
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 120/274 (43%), Gaps = 33/274 (12%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
LG+GGF ++ I + T G + ++ LKP + E+ L +P
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSM-LLKP---HQKEKMSTEIAIHKSLDNP 102
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSL-ENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
++V G+ +DD +V E R SL E H R+ + P + +G+ +LH
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF--MRQTIQGVQYLHN 160
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVSTRVVGTYGYAAPEYVM 277
VI+RD K N+ L+ + + K+ DFGLA K G++ + GT Y APE +
Sbjct: 161 NR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIAPEVLC 215
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
+ + D++S G +L +L G +P E + Y+ K+ Y + PR
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVG-------KPPFETS--CLKETYIRIKKNEYSV--PR- 263
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
+N S L L DP RPS+ E++
Sbjct: 264 HIN------PVASALIRRMLHADPTLRPSVAELL 291
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 116/285 (40%), Gaps = 37/285 (12%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWV 147
A +F LG+G FG V+ + S +A+K L L+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLA---------REKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV+ L HPN+++L GY + + L+ E+ G++ L ++
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L++ H S+ VI+RD K N+LL S K++DFG + P + + GT
Sbjct: 119 ELANALSYCH--SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDD----LCGT 172
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKR 327
Y PE + K D++S GV+ E L G +P E N +
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEANTY----------Q 215
Query: 328 KLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ Y+ + R+E + + L L +P RP + EV++
Sbjct: 216 ETYKRIS-RVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 120/274 (43%), Gaps = 33/274 (12%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
LG+GGF ++ I + T G + ++ LKP + E+ L +P
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSM-LLKP---HQKEKMSTEIAIHKSLDNP 102
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSL-ENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
++V G+ +DD +V E R SL E H R+ + P + +G+ +LH
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF--MRQTIQGVQYLHN 160
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVSTRVVGTYGYAAPEYVM 277
VI+RD K N+ L+ + + K+ DFGLA K G++ + GT Y APE +
Sbjct: 161 NR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT---LCGTPNYIAPEVLC 215
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
+ + D++S G +L +L G +P E + Y+ K+ Y + PR
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVG-------KPPFETS--CLKETYIRIKKNEYSV--PR- 263
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
+N S L L DP RPS+ E++
Sbjct: 264 HIN------PVASALIRRMLHADPTLRPSVAELL 291
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 44/279 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+GEG G V + SG VAVK + Q EV + H N
Sbjct: 28 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA---LGAAKGLAFLH 217
+V++ + D+ +V EF+ G+L + + + N +IA L + L+ LH
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRM-----NEEQIAAVCLAVLQALSVLH 133
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFG----LAKAGPQGDKTHVSTRVVGTYGYAAP 273
++ VI+RD K+ +ILL + KLSDFG ++K P+ +VGT + AP
Sbjct: 134 --AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPYWMAP 185
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + D++S G++++E++ G + P ++ R L + K V
Sbjct: 186 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKV 242
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
P SLKG L RDP R + E++K
Sbjct: 243 SP------SLKGFLD------RLLVRDPAQRATAAELLK 269
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 196 PLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA-GPQ 254
P+ I++ A + L F H +I+RD K +NI++ + K+ DFG+A+A
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 255 GDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
G+ + V+GT Y +PE + ++SDVYS G VL E+LTG
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 196 PLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA-GPQ 254
P+ I++ A + L F H +I+RD K +NI++ + K+ DFG+A+A
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADS 169
Query: 255 GDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
G+ + V+GT Y +PE + ++SDVYS G VL E+LTG
Sbjct: 170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 44/279 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+GEG G V + SG VAVK + Q EV + H N
Sbjct: 32 IGEGSTGIVCIATVR---------SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA---LGAAKGLAFLH 217
+V++ + D+ +V EF+ G+L + + + N +IA L + L+ LH
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRM-----NEEQIAAVCLAVLQALSVLH 137
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFG----LAKAGPQGDKTHVSTRVVGTYGYAAP 273
++ VI+RD K+ +ILL + KLSDFG ++K P+ +VGT + AP
Sbjct: 138 --AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPYWMAP 189
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + + D++S G++++E++ G + P ++ R L + K V
Sbjct: 190 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKV 246
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
P SLKG L RDP R + E++K
Sbjct: 247 SP------SLKGFLD------RLLVRDPAQRATAAELLK 273
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 25/225 (11%)
Query: 90 SATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKP-DGLQGHREWVA 148
+ + +F+ S+LGEG +G V +A KP +G VA+K ++P D +
Sbjct: 8 NISSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLR 58
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIA 206
E+ L H N++ + D ++ + ++ L R T L +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK---------AGPQGDK 257
+ + LHG + VI+RD K SN+L++S + K+ DFGLA+ + P G +
Sbjct: 119 YQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 258 THVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
+ + T V T Y APE ++T S++ DV+S G +L E+ R
Sbjct: 177 SGM-TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 24/219 (10%)
Query: 93 GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVK-----SLKPDGLQGHREWV 147
GN+R +G+G F V +G VAVK L P LQ +
Sbjct: 15 GNYRLQKTIGKGNFAKV---------KLARHVLTGREVAVKIIDKTQLNPTSLQ---KLF 62
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
EV + L+HPN+VKL + LV E+ + G + ++L R K
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR- 121
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+ + H + +++RD K N+LLD + N K++DFG + G+K G+
Sbjct: 122 QIVSAVQYCH--QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGS 176
Query: 268 YGYAAPEYVMTGHLTS-KSDVYSFGVVLLEILTGRRSMD 305
YAAPE + DV+S GV+L +++G D
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 120/274 (43%), Gaps = 33/274 (12%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
LG+GGF ++ I + T G + ++ LKP + E+ L +P
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSM-LLKP---HQKEKMSTEIAIHKSLDNP 102
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSL-ENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
++V G+ +DD +V E R SL E H R+ + P + +G+ +LH
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF--MRQTIQGVQYLHN 160
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVSTRVVGTYGYAAPEYVM 277
VI+RD K N+ L+ + + K+ DFGLA K G++ + GT Y APE +
Sbjct: 161 NR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEVLC 215
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
+ + D++S G +L +L G +P E + Y+ K+ Y + PR
Sbjct: 216 KKGHSFEVDIWSLGCILYTLLVG-------KPPFETS--CLKETYIRIKKNEYSV--PR- 263
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
+N S L L DP RPS+ E++
Sbjct: 264 HIN------PVASALIRRMLHADPTLRPSVAELL 291
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 122/295 (41%), Gaps = 43/295 (14%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LGEGGF YV G A+K + Q E E D +HPN
Sbjct: 37 LGEGGFSYV---------DLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPN 87
Query: 161 LVKLIGYCIED----DQRLLVYEFMTRGSLENHLFR---RTIPLPWSNRIKIALGAAKGL 213
+++L+ YC+ + + L+ F RG+L N + R + L + + LG +GL
Sbjct: 88 ILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGL 147
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFG---LAKAGPQGDKTHVSTRVVG---- 266
+H ++ +RD K +NILL E L D G A +G + ++ +
Sbjct: 148 EAIH--AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 267 TYGYAAPE-YVMTGH--LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYL 323
T Y APE + + H + ++DV+S G VL ++ G D G+ +A
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA------ 259
Query: 324 ADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQ 378
V +L + S + + QL + ++ DP RP + ++ L LQ
Sbjct: 260 ---------VQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 120/274 (43%), Gaps = 33/274 (12%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
LG+GGF ++ I + T G + ++ LKP + E+ L +P
Sbjct: 33 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSM-LLKP---HQKEKMSTEIAIHKSLDNP 86
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSL-ENHLFRRTIPLPWSNRIKIALGAAKGLAFLHG 218
++V G+ +DD +V E R SL E H R+ + P + +G+ +LH
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF--MRQTIQGVQYLHN 144
Query: 219 GSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVSTRVVGTYGYAAPEYVM 277
VI+RD K N+ L+ + + K+ DFGLA K G++ + GT Y APE +
Sbjct: 145 NR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEVLC 199
Query: 278 TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRL 337
+ + D++S G +L +L G +P E + Y+ K+ Y + PR
Sbjct: 200 KKGHSFEVDIWSLGCILYTLLVG-------KPPFETS--CLKETYIRIKKNEYSV--PR- 247
Query: 338 ELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
+N S L L DP RPS+ E++
Sbjct: 248 HIN------PVASALIRRMLHADPTLRPSVAELL 275
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 25/225 (11%)
Query: 90 SATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKP-DGLQGHREWVA 148
+ + +F+ S+LGEG +G V +A KP +G VA+K ++P D +
Sbjct: 8 NISSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLR 58
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIA 206
E+ L H N++ + D ++ + ++ L R T L +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK---------AGPQGDK 257
+ + LHG + VI+RD K SN+L++S + K+ DFGLA+ + P G +
Sbjct: 119 YQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 258 THVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
+ + T V T Y APE ++T S++ DV+S G +L E+ R
Sbjct: 177 SGM-TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 114/282 (40%), Gaps = 40/282 (14%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW-- 146
+ F +LG+G FG V ++E T G A+K LK + + E
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAH 194
Query: 147 -VAEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
+ E L HP L L Y + RL V E+ G L HL R + +S
Sbjct: 195 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERV---FSEDRA 250
Query: 205 IALGA--AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
GA L +LH + V+YRD K N++LD + + K++DFGL K G + T +
Sbjct: 251 RFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT- 308
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 309 -FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------Y 350
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
D KL++++ E+ + + L L +DPK R
Sbjct: 351 NQDHEKLFELILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 196 PLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA-GPQ 254
P+ I++ A + L F H +I+RD K +NI++ + K+ DFG+A+A
Sbjct: 129 PMTPKRAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADS 186
Query: 255 GDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
G+ + V+GT Y +PE + ++SDVYS G VL E+LTG
Sbjct: 187 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 112/271 (41%), Gaps = 40/271 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW---VAEVDFLGQL 156
+LG+G FG V ++E T G A+K LK + + E + E L
Sbjct: 158 LLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 208
Query: 157 HHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGA--AKGL 213
HP L L Y + RL V E+ G L HL R + +S GA L
Sbjct: 209 RHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERV---FSEDRARFYGAEIVSAL 264
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
+LH + V+YRD K N++LD + + K++DFGL K G + T + GT Y AP
Sbjct: 265 DYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAP 321
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + D + GVV+ E++ GR Y D KL++++
Sbjct: 322 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQDHEKLFELI 364
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
E+ + + L L +DPK R
Sbjct: 365 LME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 16/162 (9%)
Query: 147 VAEVDFLGQLHHPNLVKLIGYCIEDDQRLL--VYEF---------MTRGSLENHLFRRTI 195
V+EV+ L +L HPN+V+ I+ L V E+ +T+G+ E
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 196 PLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQG 255
L ++ +AL + G V++RD K +N+ LD + N KL DFGLA+
Sbjct: 113 VLRVMTQLTLALKECHRRS---DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 256 DKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEI 297
+ + VGT Y +PE + KSD++S G +L E+
Sbjct: 170 ED--FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPA-KPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
++ +LG+G FG V + G A K S V K+ K L+ EV L
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-------EVQLL 80
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
QL HPN+ KL + + LV E T G L + + R + +I G+
Sbjct: 81 KQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGI 139
Query: 214 AFLHGGSEPVIYRDFKTSNILLDS---EYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+ H +++RD K N+LL+S + N ++ DFGL+ K +GT Y
Sbjct: 140 TYXH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK---IGTAYY 194
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V+ G K DV+S GV+L +L+G
Sbjct: 195 IAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 123/278 (44%), Gaps = 41/278 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-EVDFLGQLHH 158
LG+GGF F+ I + T G + ++ LKP RE ++ E+ L H
Sbjct: 28 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSL-LLKPH----QREKMSMEISIHRSLAH 80
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSL-ENHLFRRTIPLPWSNRI--KIALGAAKGLAF 215
++V G+ ++D +V E R SL E H R+ + P + +I LG +
Sbjct: 81 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----Y 136
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVSTRVVGTYGYAAPE 274
LH VI+RD K N+ L+ + K+ DFGLA K G++ + GT Y APE
Sbjct: 137 LHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPE 191
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVD 334
+ + + DV+S G ++ +L G +P E + YL K+ Y I
Sbjct: 192 VLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETS--CLKETYLRIKKNEYSIP- 241
Query: 335 PRLELNYSLKGVQKV-SQLAYNCLSRDPKSRPSMDEVV 371
K + V + L L DP +RP+++E++
Sbjct: 242 ---------KHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 123/278 (44%), Gaps = 41/278 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-EVDFLGQLHH 158
LG+GGF F+ I + T G + ++ LKP RE ++ E+ L H
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSL-LLKPH----QREKMSMEISIHRSLAH 76
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSL-ENHLFRRTIPLPWSNRI--KIALGAAKGLAF 215
++V G+ ++D +V E R SL E H R+ + P + +I LG +
Sbjct: 77 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----Y 132
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVSTRVVGTYGYAAPE 274
LH VI+RD K N+ L+ + K+ DFGLA K G++ + GT Y APE
Sbjct: 133 LHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPE 187
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVD 334
+ + + DV+S G ++ +L G +P E + YL K+ Y I
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETS--CLKETYLRIKKNEYSIP- 237
Query: 335 PRLELNYSLKGVQKV-SQLAYNCLSRDPKSRPSMDEVV 371
K + V + L L DP +RP+++E++
Sbjct: 238 ---------KHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 111/271 (40%), Gaps = 40/271 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW---VAEVDFLGQL 156
+LG+G FG V ++E T G A+K LK + + E + E L
Sbjct: 17 LLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 67
Query: 157 HHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGA--AKGL 213
HP L L Y + RL V E+ G L HL R + +S GA L
Sbjct: 68 RHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERV---FSEDRARFYGAEIVSAL 123
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
+LH + V+YRD K N++LD + + K++DFGL K G + T GT Y AP
Sbjct: 124 DYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAP 180
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + D + GVV+ E++ GR Y D KL++++
Sbjct: 181 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQDHEKLFELI 223
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
E+ + + L L +DPK R
Sbjct: 224 LME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 124/314 (39%), Gaps = 74/314 (23%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFL 153
+F+ ++G GGFG VFK G T ++ +K + + RE V L
Sbjct: 13 DFKEIELIGSGGFGQVFKA---------KHRIDGKTYVIRRVKYNNEKAERE----VKAL 59
Query: 154 GQLHHPNLVKLIG--------------------YCIEDDQR---------LLVYEFMTRG 184
+L H N+V G Y E+ + + EF +G
Sbjct: 60 AKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKG 119
Query: 185 SLENHLF-RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKL 243
+LE + RR L +++ KG+ ++H S+ +I+RD K SNI L K+
Sbjct: 120 TLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH--SKKLIHRDLKPSNIFLVDTKQVKI 177
Query: 244 SDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRS 303
DFGL + K TR GT Y +PE + + + D+Y+ G++L E+L
Sbjct: 178 GDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHV--- 231
Query: 304 MDKKRPSGEQNLVAWARQYLADKRK--LYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDP 361
+ ++ D R + I D +K L LS+ P
Sbjct: 232 ---------CDTAFETSKFFTDLRDGIISDIFD------------KKEKTLLQKLLSKKP 270
Query: 362 KSRPSMDEVVKVLT 375
+ RP+ E+++ LT
Sbjct: 271 EDRPNTSEILRTLT 284
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 123/278 (44%), Gaps = 41/278 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-EVDFLGQLHH 158
LG+GGF F+ I + T G + ++ LKP RE ++ E+ L H
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSL-LLKPH----QREKMSMEISIHRSLAH 76
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSL-ENHLFRRTIPLPWSNRI--KIALGAAKGLAF 215
++V G+ ++D +V E R SL E H R+ + P + +I LG +
Sbjct: 77 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----Y 132
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHVSTRVVGTYGYAAPE 274
LH VI+RD K N+ L+ + K+ DFGLA K G++ + GT Y APE
Sbjct: 133 LHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPE 187
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVD 334
+ + + DV+S G ++ +L G +P E + YL K+ Y I
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVG-------KPPFETS--CLKETYLRIKKNEYSIP- 237
Query: 335 PRLELNYSLKGVQKV-SQLAYNCLSRDPKSRPSMDEVV 371
K + V + L L DP +RP+++E++
Sbjct: 238 ---------KHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 111/271 (40%), Gaps = 40/271 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW---VAEVDFLGQL 156
+LG+G FG V ++E T G A+K LK + + E + E L
Sbjct: 16 LLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 66
Query: 157 HHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGA--AKGL 213
HP L L Y + RL V E+ G L HL R + +S GA L
Sbjct: 67 RHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERV---FSEDRARFYGAEIVSAL 122
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
+LH + V+YRD K N++LD + + K++DFGL K G + T GT Y AP
Sbjct: 123 DYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAP 179
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV 333
E + D + GVV+ E++ GR Y D KL++++
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------YNQDHEKLFELI 222
Query: 334 DPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
E+ + + L L +DPK R
Sbjct: 223 LME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 113/282 (40%), Gaps = 40/282 (14%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW-- 146
+ F +LG+G FG V ++E T G A+K LK + + E
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAH 54
Query: 147 -VAEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
+ E L HP L L Y + RL V E+ G L HL R + +S
Sbjct: 55 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERV---FSEDRA 110
Query: 205 IALGA--AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
GA L +LH + V+YRD K N++LD + + K++DFGL K G + T
Sbjct: 111 RFYGAEIVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MK 167
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
GT Y APE + D + GVV+ E++ GR Y
Sbjct: 168 XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----------------Y 210
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSR 364
D KL++++ E+ + + L L +DPK R
Sbjct: 211 NQDHEKLFELILME-EIRFPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 120/292 (41%), Gaps = 43/292 (14%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G+G G V+ +G VA++ + + E+ + + +PN
Sbjct: 29 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
+V + + D+ +V E++ GSL + + + + + L FLH S
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLH--S 135
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFGL-AKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
VI+R+ K+ NILL + + KL+DFG A+ P+ K + +VGT + APE V
Sbjct: 136 NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRK 192
Query: 280 HLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIV---DPR 336
K D++S G++ +E++ G + P R LY I P
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----------------RALYLIATNGTPE 236
Query: 337 LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV-----KVLTPLQDLNDL 383
L+ L + + CL D + R S E++ K+ PL L L
Sbjct: 237 LQNPEKLSAIFR--DFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTPL 286
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWV-AEVDFLGQLHHP 159
LG G FG V +EE SG+ +K++ D Q E + AE++ L L HP
Sbjct: 30 LGSGAFGDV--HLVEERS-------SGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR---RTIPLPWSNRIKIALGAAKGLAFL 216
N++K+ + +V E G L + R L ++ LA+
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 217 HGGSEPVIYRDFKTSNILL-DSEYNA--KLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
H S+ V+++D K NIL D+ ++ K+ DFGLA+ + ST GT Y AP
Sbjct: 141 H--SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAP 195
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTG 300
E V +T K D++S GVV+ +LTG
Sbjct: 196 E-VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL--KPDGLQGHREWVAEVDFLGQLH 157
++GEG +G V K +G VA+K D + + E+ L QL
Sbjct: 32 LVGEGSYGMVMKC---------RNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLEN-HLFRRTIPLPWSNRIKIALGAAKGLAFL 216
H NLV L+ C + + LV+EF+ L++ LF L + K G+ F
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG--LDYQVVQKYLFQIINGIGFC 140
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK--AGPQGDKTHVSTRVVGTYGYAAPE 274
H S +I+RD K NIL+ KL DFG A+ A P V V T Y APE
Sbjct: 141 H--SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP----GEVYDDEVATRWYRAPE 194
Query: 275 YVMTGHLTSKS-DVYSFGVVLLEILTG 300
++ K+ DV++ G ++ E+ G
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 10/161 (6%)
Query: 143 HREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNR 202
H E E+ L L HPN++KL + LV EF G L + R +
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDA 148
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSE---YNAKLSDFGLAKAGPQGDKTH 259
I G+ +LH +++RD K NILL+++ N K+ DFGL+ + K
Sbjct: 149 ANIMKQILSGICYLH--KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLR 206
Query: 260 VSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
+GT Y APE V+ K DV+S GV++ +L G
Sbjct: 207 DR---LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 18/211 (8%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE---WVAEV 150
+F ++G+G FG V + AVK L+ + +E ++E
Sbjct: 39 DFHFLKVIGKGSFGKVLLA---------RHKAEEVFYAVKVLQKKAILKKKEEKHIMSER 89
Query: 151 D-FLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGA 209
+ L + HP LV L D+ V +++ G L HL R L R A
Sbjct: 90 NVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEI 148
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYG 269
A L +LH S ++YRD K NILLDS+ + L+DFGL K + + T ++ GT
Sbjct: 149 ASALGYLH--SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPE 204
Query: 270 YAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE + D + G VL E+L G
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Query: 90 SATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKP-DGLQGHREWVA 148
+ + +F+ S+LGEG +G V +A KP +G VA+K ++P D +
Sbjct: 8 NISSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLR 58
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIA 206
E+ L H N++ + D ++ + ++ L R T L +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK---------AGPQGDK 257
+ + LHG + VI+RD K SN+L++S + K+ DFGLA+ + P G +
Sbjct: 119 YQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 258 THVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSFGVVLLEILTGR 301
+ + V T Y APE ++T S++ DV+S G +L E+ R
Sbjct: 177 SGM-VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 86 QELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGH 143
Q K +F+ ILGEG F V + + A+K L+ + +
Sbjct: 2 QPRKKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENK 52
Query: 144 REWVA-EVDFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIP 196
+V E D + +L HP VKL + +DD++L + G L ++ F T
Sbjct: 53 VPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT 111
Query: 197 LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD 256
++ I L +LHG +I+RD K NILL+ + + +++DFG AK
Sbjct: 112 RFYTAEI------VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 163
Query: 257 KTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
K + VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 164 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 86 QELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGH 143
Q K +F+ ILGEG F V + + A+K L+ + +
Sbjct: 3 QPRKKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENK 53
Query: 144 REWVA-EVDFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIP 196
+V E D + +L HP VKL + +DD++L + G L ++ F T
Sbjct: 54 VPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT 112
Query: 197 LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD 256
++ I L +LHG +I+RD K NILL+ + + +++DFG AK
Sbjct: 113 RFYTAEI------VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 164
Query: 257 KTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
K + VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 165 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 86 QELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGH 143
Q K +F+ ILGEG F V + + A+K L+ + +
Sbjct: 1 QPRKKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENK 51
Query: 144 REWVA-EVDFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIP 196
+V E D + +L HP VKL + +DD++L + G L ++ F T
Sbjct: 52 VPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT 110
Query: 197 LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD 256
++ I L +LHG +I+RD K NILL+ + + +++DFG AK
Sbjct: 111 RFYTAEI------VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162
Query: 257 KTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
K + VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 163 KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 94/226 (41%), Gaps = 39/226 (17%)
Query: 90 SATGNF-RPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA 148
S G F + D +G G F V+KG E A + + L Q +E
Sbjct: 22 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVA----WCELQDRKLTKSERQRFKE--- 74
Query: 149 EVDFLGQLHHPNLVKLIG---------YCIEDDQRLLVYEFMTRGSLENHLFRRTIP--- 196
E + L L HPN+V+ CI +LV E T G+L+ +L R +
Sbjct: 75 EAEXLKGLQHPNIVRFYDSWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIK 129
Query: 197 --LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEY-NAKLSDFGLAKAGP 253
W +I KGL FLH + P+I+RD K NI + + K+ D GLA
Sbjct: 130 VLRSWCRQI------LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL-- 181
Query: 254 QGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
+ + V+GT + APE + S DVY+FG LE T
Sbjct: 182 --KRASFAKAVIGTPEFXAPEXYEEKYDES-VDVYAFGXCXLEXAT 224
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 102/223 (45%), Gaps = 25/223 (11%)
Query: 89 KSATGNFRPDSILGEGGFGYVF---KGWIEENGTAPA-KPGSGITVAVKSLKPDGLQGHR 144
K NF +LG G +G VF K + G A K T+ K+ + + R
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 145 ---EWVAEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWS 200
E + + FL LH Y + + +L L+ +++ G L HL +R
Sbjct: 110 QVLEHIRQSPFLVTLH---------YAFQTETKLHLILDYINGGELFTHLSQR--ERFTE 158
Query: 201 NRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHV 260
+ ++I +G LA H +IYRD K NILLDS + L+DFGL+K D+T
Sbjct: 159 HEVQIYVGEIV-LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV-ADETER 216
Query: 261 STRVVGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEILTG 300
+ GT Y AP+ V +GH D +S GV++ E+LTG
Sbjct: 217 AYDFCGTIEYMAPDIVRGGDSGH-DKAVDWWSLGVLMYELLTG 258
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVA-EV 150
+F+ ILGEG F V + + A+K L+ + + +V E
Sbjct: 8 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 58
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNRIK 204
D + +L HP VKL + +DD++L + G L ++ F T ++ I
Sbjct: 59 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI- 116
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 117 -----VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 25/206 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWVAEVDFLGQLH 157
LG+G FG V+ + S +A+K L L+ + EV+ L
Sbjct: 20 LGKGKFGNVYLA---------RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL---GAAKGLA 214
HPN+++L GY + + L+ E+ G++ +R L + + A A L+
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATYITELANALS 126
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
+ H S+ VI+RD K N+LL S K++DFG + P + T + GT Y PE
Sbjct: 127 YCH--SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPE 180
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTG 300
+ K D++S GV+ E L G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 27/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVA-EV 150
+F+ ILGEG F V + + A+K L+ + + +V E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNRIK 204
D + +L HP VKL + +DD++L + G L ++ F T ++ I
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEI- 141
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 142 -----VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 194
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + + SD+++ G ++ +++ G
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 19/203 (9%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH---REWVAEVDFLGQLH 157
LG+G FG V+ + S VA+K L ++ + E++ LH
Sbjct: 31 LGKGKFGNVYLA---------REKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
HPN+++L Y + + L+ E+ RG L L +++ I A L + H
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKEL-QKSCTFDEQRTATIMEELADALMYCH 140
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM 277
G VI+RD K N+LL + K++DFG + P + + GT Y PE +
Sbjct: 141 GKK--VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR----KTMCGTLDYLPPEMIE 194
Query: 278 TGHLTSKSDVYSFGVVLLEILTG 300
K D++ GV+ E+L G
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVA-EV 150
+F+ ILGEG F V + + A+K L+ + + +V E
Sbjct: 31 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNRIK 204
D + +L HP VKL + +DD++L + G L ++ F T ++ I
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI- 139
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 140 -----VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVA-EV 150
+F+ ILGEG F V + + A+K L+ + + +V E
Sbjct: 31 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNRIK 204
D + +L HP VKL + +DD++L + G L ++ F T ++ I
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI- 139
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 140 -----VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 93 GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAEV 150
GN+R +G+G F V +G VAVK + L ++ EV
Sbjct: 14 GNYRLLKTIGKGNFAKV---------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREV 64
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGA 209
+ L+HPN+VKL IE ++ L LV E+ + G + ++L R K
Sbjct: 65 RIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QI 122
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYG 269
+ + H + +++RD K N+LLD++ N K++DFG + G+K G+
Sbjct: 123 VSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPP 177
Query: 270 YAAPEYVMTGHLTS-KSDVYSFGVVLLEILTGRRSMD 305
YAAPE + DV+S GV+L +++G D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 93 GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAEV 150
GN+R +G+G F V +G VAVK + L ++ EV
Sbjct: 14 GNYRLLKTIGKGNFAKV---------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREV 64
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGA 209
+ L+HPN+VKL IE ++ L LV E+ + G + ++L R K
Sbjct: 65 RIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QI 122
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYG 269
+ + H + +++RD K N+LLD++ N K++DFG + G+K G+
Sbjct: 123 VSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPP 177
Query: 270 YAAPEYVMTGHLTS-KSDVYSFGVVLLEILTGRRSMD 305
YAAPE + DV+S GV+L +++G D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVA-EV 150
+F+ ILGEG F V + + A+K L+ + + +V E
Sbjct: 15 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 65
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNRIK 204
D + +L HP VKL + +DD++L + G L ++ F T ++ I
Sbjct: 66 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI- 123
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 124 -----VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 176
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVA-EV 150
+F+ ILGEG F V + + A+K L+ + + +V E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNRIK 204
D + +L HP VKL + +DD++L + G L ++ F T ++ I
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI- 141
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 142 -----VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 20/218 (9%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAE 149
GN+R +G+G F V +G VAVK + L ++ E
Sbjct: 6 IGNYRLLKTIGKGNFAKV---------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE 56
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALG 208
V + L+HPN+VKL IE ++ L LV E+ + G + ++L R K
Sbjct: 57 VRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-Q 114
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ + H + +++RD K N+LLD++ N K++DFG + G+K G+
Sbjct: 115 IVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSP 169
Query: 269 GYAAPEYVMTGHLTS-KSDVYSFGVVLLEILTGRRSMD 305
YAAPE + DV+S GV+L +++G D
Sbjct: 170 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVA-EV 150
+F+ ILGEG F V + + A+K L+ + + +V E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNRIK 204
D + +L HP VKL + +DD++L + G L ++ F T ++ I
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI- 141
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 142 -----VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 15/215 (6%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N+ P ILG G V + + A +T S + +Q RE + EVD
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGG-GSFSAEEVQELREATLKEVDI 63
Query: 153 LGQLH-HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ HPN+++L + LV++ M +G L ++L + + L KI +
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLE 122
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
+ LH + +++RD K NILLD + N KL+DFG + G+K V GT Y
Sbjct: 123 VICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYL 177
Query: 272 APEYVMTGH------LTSKSDVYSFGVVLLEILTG 300
APE + + D++S GV++ +L G
Sbjct: 178 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVA-EV 150
+F+ ILGEG F V + + A+K L+ + + +V E
Sbjct: 31 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNRIK 204
D + +L HP VKL + +DD++L + G L ++ F T ++ I
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI- 139
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 140 -----VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 15/215 (6%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N+ P ILG G V + + A +T S + +Q RE + EVD
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGG-GSFSAEEVQELREATLKEVDI 76
Query: 153 LGQLH-HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ HPN+++L + LV++ M +G L ++L + + L KI +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLE 135
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
+ LH + +++RD K NILLD + N KL+DFG + G+K V GT Y
Sbjct: 136 VICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYL 190
Query: 272 APEYVMTGH------LTSKSDVYSFGVVLLEILTG 300
APE + + D++S GV++ +L G
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVA-EV 150
+F+ ILGEG F V + + A+K L+ + + +V E
Sbjct: 30 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 80
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNRIK 204
D + +L HP VKL + +DD++L + G L ++ F T ++ I
Sbjct: 81 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI- 138
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 139 -----VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 191
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVA-EV 150
+F+ ILGEG F V + + A+K L+ + + +V E
Sbjct: 34 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 84
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNRIK 204
D + +L HP VKL + +DD++L + G L ++ F T ++ I
Sbjct: 85 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI- 142
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 143 -----VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVA-EV 150
+F+ ILGEG F V + + A+K L+ + + +V E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNRIK 204
D + +L HP VKL + +DD++L + G L ++ F T ++ I
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI- 141
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 142 -----VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVA-EV 150
+F+ ILGEG F V + + A+K L+ + + +V E
Sbjct: 30 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 80
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNRIK 204
D + +L HP VKL + +DD++L + G L ++ F T ++ I
Sbjct: 81 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI- 138
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 139 -----VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNR 202
E D + +L HP VKL + +DD++L + G L ++ F T ++
Sbjct: 80 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 138
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
I L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 139 I------VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 45/229 (19%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL------KPDGLQGHREWVAEVDFLG 154
LG+G +G V+K +G VAVK + D + RE + + G
Sbjct: 17 LGKGAYGIVWKS---------IDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 155 QLHHPNLVKLIGYCIEDDQR--LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKG 212
H N+V L+ D+ R LV+++M + H R L ++ + K
Sbjct: 68 ---HENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVHKQYVVYQLIKV 121
Query: 213 LAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQ------------------ 254
+ +LH G +++RD K SNILL++E + K++DFGL+++
Sbjct: 122 IKYLHSGG--LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 255 -GDKTHVSTRVVGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
D + T V T Y APE ++ + T D++S G +L EIL G+
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 27/216 (12%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL--QGHREWVA-EV 150
+F+ ILGEG F V + + A+K L+ + + +V E
Sbjct: 34 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 84
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNRIK 204
D + +L HP VKL + +DD++L + G L ++ F T ++ I
Sbjct: 85 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI- 142
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 143 -----VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 149 EVDFLGQLHHPNLVKLIGYC-IEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSN----R 202
E D + + P +V+L +C +DD+ L +V E+M G L N + +P W+
Sbjct: 125 ERDIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAE 182
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
+ +AL A + +H RD K N+LLD + KL+DFG + H T
Sbjct: 183 VVLALDAIHSMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT 234
Query: 263 RVVGTYGYAAPEYVMT----GHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + + G+ + D +S GV L E+L G
Sbjct: 235 -AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 30/220 (13%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLG 154
F+ + + G+G FG V G + +G++VA+K + D +RE D L
Sbjct: 25 FQVERMAGQGTFGTVQLG---------KEKSTGMSVAIKKVIQDPRFRNRELQIMQD-LA 74
Query: 155 QLHHPNLVKLIGYCI---EDDQRLL----VYEFM---TRGSLENHLFRRTIPLPWSNRIK 204
LHHPN+V+L Y E D+R + V E++ N+ R+ P P ++
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV- 133
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILL-DSEYNAKLSDFGLAK--AGPQGDKTHVS 261
+ + LH S V +RD K N+L+ +++ KL DFG AK + + + ++
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC 193
Query: 262 TRVVGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTG 300
+R Y APE + H T+ D++S G + E++ G
Sbjct: 194 SRY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 40/225 (17%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQ--LH 157
+G+G +G V++G W G +VAVK + + W E + L
Sbjct: 16 VGKGRYGEVWRGLW------------HGESVAVKIFSS---RDEQSWFRETEIYNTVLLR 60
Query: 158 HPNLVKLIGYCI----EDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
H N++ I + Q L+ + GSL + L R+T+ + +++A+ AA GL
Sbjct: 61 HDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA--LRLAVSAACGL 118
Query: 214 AFLH------GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQG-DKTHVSTRV-V 265
A LH G + +RDFK+ N+L+ S ++D GLA QG D + V
Sbjct: 119 AHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV 178
Query: 266 GTYGYAAPEY----VMTGHLTSK--SDVYSFGVVLLEILTGRRSM 304
GT Y APE + T S +D+++FG+VL EI RR++
Sbjct: 179 GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTI 221
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNR 202
E D + +L HP VKL + +DD++L + G L ++ F T ++
Sbjct: 82 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
I L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 141 I------VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNR 202
E D + +L HP VKL + +DD++L + G L ++ F T ++
Sbjct: 82 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 140
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
I L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 141 I------VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 193 XFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSN----RI 203
E D + + P +V+L Y +DD+ L +V E+M G L N + +P W+ +
Sbjct: 119 ERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 177
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
+AL A + F+H RD K N+LLD + KL+DFG + T
Sbjct: 178 VLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT- 228
Query: 264 VVGTYGYAAPEYVMT----GHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + + G+ + D +S GV L E+L G
Sbjct: 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAE 149
GN+R +G+G F V +G VAVK + L ++ E
Sbjct: 13 IGNYRLLKTIGKGNFAKV---------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALG 208
V + L+HPN+VKL IE ++ L LV E+ + G + ++L R K
Sbjct: 64 VRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-Q 121
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ + H + +++RD K N+LLD++ N K++DFG + G+K G
Sbjct: 122 IVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAP 176
Query: 269 GYAAPEYVMTGHLTS-KSDVYSFGVVLLEILTGRRSMD 305
YAAPE + DV+S GV+L +++G D
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 15/215 (6%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-WVAEVDF 152
N+ P ILG G V + + A +T S + +Q RE + EVD
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGG-GSFSAEEVQELREATLKEVDI 76
Query: 153 LGQLH-HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ HPN+++L + LV++ M +G L ++L + + L KI +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLE 135
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
+ LH + +++RD K NILLD + N KL+DFG + G+K V GT Y
Sbjct: 136 VICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVCGTPSYL 190
Query: 272 APEYVMTGH------LTSKSDVYSFGVVLLEILTG 300
APE + + D++S GV++ +L G
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLV-YEFMTRGSLENHL-----FRRTIPLPWSNR 202
E D + +L HP VKL + +DD++L + G L ++ F T ++
Sbjct: 85 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE 143
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
I L +LHG +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 144 I------VSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 195
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + SD+++ G ++ +++ G
Sbjct: 196 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEV 150
+F I+G GGFG V+ K +G A+K L + QG + E
Sbjct: 189 DFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 239
Query: 151 DFLGQLHHPN--LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
L + + + + Y +L + + M G L HL + + +S
Sbjct: 240 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFY 296
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L H + V+YRD K +NILLD + ++SD GLA K H S VGT
Sbjct: 297 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGT 352
Query: 268 YGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTG 300
+GY APE + G S +D +S G +L ++L G
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSN----RI 203
E D + + P +V+L Y +DD+ L +V E+M G L N + +P W+ +
Sbjct: 124 ERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 182
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
+AL A + F+H RD K N+LLD + KL+DFG + T
Sbjct: 183 VLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT- 233
Query: 264 VVGTYGYAAPEYVMT----GHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + + G+ + D +S GV L E+L G
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWVAEV 150
+F I+G GGFG V+ K +G A+K L + QG + E
Sbjct: 190 DFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 151 DFLGQLHHPN--LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
L + + + + Y +L + + M G L HL + + +S
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFY 297
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L H + V+YRD K +NILLD + ++SD GLA K H S VGT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGT 353
Query: 268 YGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTG 300
+GY APE + G S +D +S G +L ++L G
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 92/217 (42%), Gaps = 23/217 (10%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWV 147
+F I+G GGFG V+ K +G A+K L + QG +
Sbjct: 187 TMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLAL 237
Query: 148 AEVDFLGQLHHPN--LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
E L + + + + Y +L + + M G L HL + + +S
Sbjct: 238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADM 294
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
A L H + V+YRD K +NILLD + ++SD GLA K H S
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS--- 350
Query: 265 VGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTG 300
VGT+GY APE + G S +D +S G +L ++L G
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 92/217 (42%), Gaps = 23/217 (10%)
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGL---QGHREWV 147
+F I+G GGFG V+ K +G A+K L + QG +
Sbjct: 187 TMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQGETLAL 237
Query: 148 AEVDFLGQLHHPN--LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIK 204
E L + + + + Y +L + + M G L HL + + +S
Sbjct: 238 NERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADM 294
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRV 264
A L H + V+YRD K +NILLD + ++SD GLA K H S
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS--- 350
Query: 265 VGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTG 300
VGT+GY APE + G S +D +S G +L ++L G
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSN----RI 203
E D + + P +V+L Y +DD+ L +V E+M G L N + +P W+ +
Sbjct: 124 ERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 182
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
+AL A + F+H RD K N+LLD + KL+DFG + T
Sbjct: 183 VLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT- 233
Query: 264 VVGTYGYAAPEYVMT----GHLTSKSDVYSFGVVLLEILTG 300
VGT Y +PE + + G+ + D +S GV L E+L G
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 123/286 (43%), Gaps = 37/286 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW----VAEVDFLGQL 156
LG+G F +FKG E G + + + V + HR + + +L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLD------KAHRNYSESFFEAASMMSKL 69
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL--FRRTIPLPWSNRIKIALGAAKGLA 214
H +LV G C+ D+ +LV EF+ GSL+ +L + I + W ++++A A +
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMH 127
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVV--GTYGYAA 272
FL + +I+ + NILL E + K + K G V + + +
Sbjct: 128 FLEENT--LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP 185
Query: 273 PEYVMT-GHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQ 331
PE + +L +D +SFG L EI +G G++ L A L +RKL Q
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSG----------GDKPLSA-----LDSQRKL-Q 229
Query: 332 IVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
+ R +L +++ L NC+ +P RPS +++ L L
Sbjct: 230 FYEDRHQL--PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 20/218 (9%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAE 149
GN+R +G+G F V +G VAV+ + L ++ E
Sbjct: 13 IGNYRLLKTIGKGNFAKV---------KLARHILTGKEVAVRIIDKTQLNSSSLQKLFRE 63
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALG 208
V + L+HPN+VKL IE ++ L LV E+ + G + ++L R K
Sbjct: 64 VRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-Q 121
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ + H + +++RD K N+LLD++ N K++DFG + G+K G+
Sbjct: 122 IVSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSP 176
Query: 269 GYAAPEYVMTGHLTS-KSDVYSFGVVLLEILTGRRSMD 305
YAAPE + DV+S GV+L +++G D
Sbjct: 177 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVK-----SLKPDGLQGHREW 146
GN+R +G+G F V +G VA+K L P LQ +
Sbjct: 14 IGNYRLLKTIGKGNFAKV---------KLARHILTGREVAIKIIDKTQLNPTSLQ---KL 61
Query: 147 VAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA 206
EV + L+HPN+VKL + L+ E+ + G + ++L R K
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR 121
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG 266
+ + H + +++RD K N+LLD++ N K++DFG + G K G
Sbjct: 122 -QIVSAVQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCG 175
Query: 267 TYGYAAPEYVMTGHLTS-KSDVYSFGVVLLEILTGRRSMD 305
YAAPE + DV+S GV+L +++G D
Sbjct: 176 APPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 24/220 (10%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVK-----SLKPDGLQGHREW 146
GN+R +G+G F V +G VA+K L P LQ +
Sbjct: 11 IGNYRLLKTIGKGNFAKV---------KLARHILTGREVAIKIIDKTQLNPTSLQ---KL 58
Query: 147 VAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA 206
EV + L+HPN+VKL + L+ E+ + G + ++L R K
Sbjct: 59 FREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR 118
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG 266
+ + H + +++RD K N+LLD++ N K++DFG + G K G
Sbjct: 119 -QIVSAVQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCG 172
Query: 267 TYGYAAPEYVMTGHLTS-KSDVYSFGVVLLEILTGRRSMD 305
+ YAAPE + DV+S GV+L +++G D
Sbjct: 173 SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 39/231 (16%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA 148
+ G++ LG G FG V G E T G VAVK L R+ +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIG--EHQLT-------GHKVAVKILN-------RQKIR 50
Query: 149 EVDFLGQL----------HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR--RTIP 196
+D +G++ HP+++KL +V E+++ G L +++ + R
Sbjct: 51 SLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE 110
Query: 197 LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD 256
+ + L A + H V++RD K N+LLD+ NAK++DFGL+ G+
Sbjct: 111 MEARRLFQQILSAVD---YCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165
Query: 257 KTHVSTRVVGTYGYAAPEYVMTGHLTS--KSDVYSFGVVLLEILTGRRSMD 305
S G+ YAAPE V++G L + + D++S GV+L +L G D
Sbjct: 166 FLRTSC---GSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 93 GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAEV 150
GN+R +G+G F V +G VAV+ + L ++ EV
Sbjct: 14 GNYRLLKTIGKGNFAKV---------KLARHILTGKEVAVRIIDKTQLNSSSLQKLFREV 64
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGA 209
+ L+HPN+VKL IE ++ L LV E+ + G + ++L R K
Sbjct: 65 RIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QI 122
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYG 269
+ + H + +++RD K N+LLD++ N K++DFG + G+K G+
Sbjct: 123 VSAVQYCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPP 177
Query: 270 YAAPEYVMTGHLTS-KSDVYSFGVVLLEILTGRRSMD 305
YAAPE + DV+S GV+L +++G D
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 22/222 (9%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HRE 145
K G + LGEG FG V + VA+K + L+ H
Sbjct: 5 KRHIGPYIIRETLGEGSFGKV---------KLATHYKTQQKVALKFISRQLLKKSDMHMR 55
Query: 146 WVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKI 205
E+ +L L HP+++KL ++V E+ G L +++ + R +
Sbjct: 56 VEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RF 113
Query: 206 ALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVV 265
+ + H +++RD K N+LLD N K++DFGL+ G+ S
Sbjct: 114 FQQIICAIEYCH--RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC--- 168
Query: 266 GTYGYAAPEYVMTGHLTS--KSDVYSFGVVLLEILTGRRSMD 305
G+ YAAPE V+ G L + + DV+S G+VL +L GR D
Sbjct: 169 GSPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 25/206 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG---HREWVAEVDFLGQLH 157
LG+G FG V+ + S +A+K L L+ + EV+ L
Sbjct: 20 LGKGKFGNVYLA---------RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL---GAAKGLA 214
HPN+++L GY + + L+ E+ G++ +R L + + A A L+
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATYITELANALS 126
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
+ H S+ VI+RD K N+LL S K++DFG + P + + GT Y PE
Sbjct: 127 YCH--SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPE 180
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTG 300
+ K D++S GV+ E L G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 92/216 (42%), Gaps = 18/216 (8%)
Query: 93 GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAEV 150
GN+R +G+G F V +G VAVK + L ++ EV
Sbjct: 14 GNYRLLKTIGKGNFAKV---------KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREV 64
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAA 210
L+HPN+VKL + LV E+ + G + ++L R K
Sbjct: 65 RIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIV 123
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+ + H + +++RD K N+LLD++ N K++DFG + G+K G Y
Sbjct: 124 SAVQYCH--QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPY 178
Query: 271 AAPEYVMTGHLTS-KSDVYSFGVVLLEILTGRRSMD 305
AAPE + DV+S GV+L +++G D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 39/231 (16%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA 148
+ G++ LG G FG V G E T G VAVK L R+ +
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIG--EHQLT-------GHKVAVKILN-------RQKIR 50
Query: 149 EVDFLGQL----------HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFR--RTIP 196
+D +G++ HP+++KL +V E+++ G L +++ + R
Sbjct: 51 SLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE 110
Query: 197 LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGD 256
+ + L A + H V++RD K N+LLD+ NAK++DFGL+ G+
Sbjct: 111 MEARRLFQQILSAVD---YCH--RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165
Query: 257 KTHVSTRVVGTYGYAAPEYVMTGHLTS--KSDVYSFGVVLLEILTGRRSMD 305
S G+ YAAPE V++G L + + D++S GV+L +L G D
Sbjct: 166 FLRDSC---GSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 122/286 (42%), Gaps = 37/286 (12%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW----VAEVDFLGQL 156
LG+G F +FKG E G + + + V + HR + + +L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLD------KAHRNYSESFFEAASMMSKL 69
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHL--FRRTIPLPWSNRIKIALGAAKGLA 214
H +LV G C D+ +LV EF+ GSL+ +L + I + W ++++A A +
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMH 127
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVV--GTYGYAA 272
FL + +I+ + NILL E + K + K G V + + +
Sbjct: 128 FLEENT--LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVP 185
Query: 273 PEYVMT-GHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQ 331
PE + +L +D +SFG L EI +G G++ L A L +RKL Q
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSG----------GDKPLSA-----LDSQRKL-Q 229
Query: 332 IVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLTPL 377
+ R +L +++ L NC+ +P RPS +++ L L
Sbjct: 230 FYEDRHQL--PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 20/187 (10%)
Query: 126 SGITVAVKSLKPDG-LQGHREWVAEVDFLGQLHH-PNLVKLIGYCIEDDQRLLVYEFMTR 183
+G +AVK ++ G + ++ + ++D + + H P +V+ G I + + E M
Sbjct: 49 TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-- 106
Query: 184 GSLENHLFRRTI-PLPWSNRIKIALGAAKGLAFL---HGGSEPVIYRDFKTSNILLDSEY 239
G+ L +R P+P K+ + K L +L HG VI+RD K SNILLD
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG----VIHRDVKPSNILLDERG 162
Query: 240 NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTS-----KSDVYSFGVVL 294
KL DFG+ +G D R G Y APE + T ++DV+S G+ L
Sbjct: 163 QIKLCDFGI--SGRLVD-DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISL 219
Query: 295 LEILTGR 301
+E+ TG+
Sbjct: 220 VELATGQ 226
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 119/273 (43%), Gaps = 53/273 (19%)
Query: 125 GSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDD--QRLLVYEFMT 182
G+ I V V ++ + R++ E L HPN++ ++G C L+ +M
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 183 RGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRD-FKTSNILLDSEYN 240
GSL N L T + S +K AL A+G+AFLH EP+I R + ++++D +
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMT 151
Query: 241 AKLS--DFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSK---SDVYSFGVVLL 295
A++S D + P R+ + APE + + +D++SF V+L
Sbjct: 152 ARISMADVKFSFQSP--------GRMYAP-AWVAPEALQKKPEDTNRRSADMWSFAVLLW 202
Query: 296 EILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQ-------- 347
E++T ++ P AD + + + +L+G++
Sbjct: 203 ELVT------REVP-------------FADLSNM------EIGMKVALEGLRPTIPPGIS 237
Query: 348 -KVSQLAYNCLSRDPKSRPSMDEVVKVLTPLQD 379
VS+L C++ DP RP D +V +L +QD
Sbjct: 238 PHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 19/177 (10%)
Query: 83 FTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG 142
F Q ++ R +L EGGF +V++ GSG A+K L + +
Sbjct: 18 FVGQTVELGELRLRVRRVLAEGGFAFVYEA---------QDVGSGREYALKRLLSNEEEK 68
Query: 143 HREWVAEVDFLGQLH-HPNLVKL-----IGYCIED--DQRLLVYEFMTRGSLENHLFRRT 194
+R + EV F+ +L HPN+V+ IG D L+ + +G L L +
Sbjct: 69 NRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKME 128
Query: 195 I--PLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLA 249
PL +KI + + +H P+I+RD K N+LL ++ KL DFG A
Sbjct: 129 SRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-----WVAEVDFLGQ 155
LGEG + V+KG S +T + +LK L+ H E + EV L
Sbjct: 10 LGEGTYATVYKG------------KSKLTDNLVALKEIRLE-HEEGAPCTAIREVSLLKD 56
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
L H N+V L + LV+E++ + L+ +L + N +GLA+
Sbjct: 57 LKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAY 115
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEY 275
H + V++RD K N+L++ KL+DFGLA+A KT+ + V T Y P+
Sbjct: 116 CH--RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDI 171
Query: 276 VM-TGHLTSKSDVYSFGVVLLEILTGR 301
++ + +++ D++ G + E+ TGR
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+GEG G V + SG VAVK + Q EV + H N
Sbjct: 53 IGEGSTGIV---------CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
+V++ + ++ ++ EF+ G+L + + L + + LA+LH +
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALTD--IVSQVRLNEEQIATVCEAVLQALAYLH--A 159
Query: 221 EPVIYRDFKTSNILLDSEYNAKLSDFG----LAKAGPQGDKTHVSTRVVGTYGYAAPEYV 276
+ VI+RD K+ +ILL + KLSDFG ++K P+ +VGT + APE +
Sbjct: 160 QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK------RKXLVGTPYWMAPEVI 213
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D++S G++++E++ G
Sbjct: 214 SRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-----EVDFLGQ 155
+GEG +G V+K A+ G T A+K ++ L+ E + E+ L +
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIR---LEKEDEGIPSTTIREISILKE 56
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
L H N+VKL + +LV+E + + L+ L L L G+A+
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEY 275
H V++RD K N+L++ E K++DFGLA+A G T V T Y AP+
Sbjct: 116 CH--DRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDV 171
Query: 276 VM-TGHLTSKSDVYSFGVVLLEILTG 300
+M + ++ D++S G + E++ G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-----EVDFLGQ 155
+GEG +G V+K A+ G T A+K ++ L+ E + E+ L +
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIR---LEKEDEGIPSTTIREISILKE 56
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
L H N+VKL + +LV+E + + L+ L L L G+A+
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEY 275
H V++RD K N+L++ E K++DFGLA+A G T V T Y AP+
Sbjct: 116 CH--DRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDV 171
Query: 276 VM-TGHLTSKSDVYSFGVVLLEILTG 300
+M + ++ D++S G + E++ G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-----EVDFLGQ 155
+GEG +G V+K A+ G T A+K ++ L+ E + E+ L +
Sbjct: 10 IGEGTYGVVYK----------AQNNYGETFALKKIR---LEKEDEGIPSTTIREISILKE 56
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
L H N+VKL + +LV+E + + L+ L L L G+A+
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEY 275
H V++RD K N+L++ E K++DFGLA+A G T + T Y AP+
Sbjct: 116 CH--DRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPDV 171
Query: 276 VM-TGHLTSKSDVYSFGVVLLEILTG 300
+M + ++ D++S G + E++ G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 17/182 (9%)
Query: 196 PLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQG 255
P+ + I + A+G+ FL S I+RD NILL K+ DFGLA+ +
Sbjct: 195 PITMEDLISYSFQVARGMEFL--SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN 252
Query: 256 DKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNL 315
+ APE + ++KSDV+S+GV+L EI S+ G
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIF----SLGGSPYPG---- 304
Query: 316 VAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVKVLT 375
V + + R+ ++ P YS ++ Q+ +C RDPK RP E+V+ L
Sbjct: 305 VQMDEDFCSRLREGMRMRAP----EYS---TPEIYQIMLDCWHRDPKERPRFAELVEKLG 357
Query: 376 PL 377
L
Sbjct: 358 DL 359
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 67 PDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGS 126
PD P DE+ C+ L + + + A + LG G FG V ++ + K +
Sbjct: 3 PDEVPLDEQ--CERLPYDASKWEFARERLKLGKSLGRGAFGKV----VQASAFGIKKSPT 56
Query: 127 GITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLV-YEFMTR 183
TVAVK LK ++ + E+ L + HH N+V L+G C + L+V E+
Sbjct: 57 CRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKY 116
Query: 184 GSLENHL 190
G+L N+L
Sbjct: 117 GNLSNYL 123
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 89/210 (42%), Gaps = 23/210 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-----EVDFLGQ 155
+GEG +G VFK E T + +LK L E V E+ L +
Sbjct: 10 IGEGTYGTVFKAKNRE------------THEIVALKRVRLDDDDEGVPSSALREICLLKE 57
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
L H N+V+L D + LV+EF + L+ + L KGL F
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEY 275
H S V++RD K N+L++ KL+DFGLA+A G + V T Y P+
Sbjct: 117 CH--SRNVLHRDLKPQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDV 172
Query: 276 VMTGHLTSKS-DVYSFGVVLLEILTGRRSM 304
+ L S S D++S G + E+ R +
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 90/212 (42%), Gaps = 23/212 (10%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-EVDFL 153
F LG G F V EE T G AVK + L+G + E+ L
Sbjct: 24 FEFKETLGTGAFSEVVLA--EEKAT-------GKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP--WSNRIKIALGAAK 211
++ H N+V L + LV + ++ G L + + + S I+ L A
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA-- 132
Query: 212 GLAFLHGGSEPVIYRDFKTSNILL---DSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ +LH +++RD K N+L D E +SDFGL+K +GD V + GT
Sbjct: 133 -VYYLHRMG--IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTP 186
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GY APE + + D +S GV+ +L G
Sbjct: 187 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 15/218 (6%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKS-LKPDGLQGHREWV 147
K +F LG+G FG V+ ++N A + V KS L+ +G++ +
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMA-----LKVLFKSQLEKEGVE--HQLR 63
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
E++ L HPN++++ Y + + L+ EF RG L L ++
Sbjct: 64 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFME 122
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L + H VI+RD K N+L+ + K++DFG + P + + GT
Sbjct: 123 ELADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGT 176
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMD 305
Y PE + K D++ GV+ E L G D
Sbjct: 177 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 147 VAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA 206
+ EV L L HPN++KL + + LV E G L + + R + + I
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR-MKFNEVDAAVII 142
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDS-EYNA--KLSDFGLAKAGPQGDKTHVSTR 263
G+ +LH +++RD K N+LL+S E +A K+ DFGL+ K
Sbjct: 143 KQVLSGVTYLH--KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM---KE 197
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
+GT Y APE V+ K DV+S GV+L +L G
Sbjct: 198 RLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 15/218 (6%)
Query: 89 KSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKS-LKPDGLQGHREWV 147
K +F LG+G FG V+ ++N A + V KS L+ +G++ +
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMA-----LKVLFKSQLEKEGVE--HQLR 62
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
E++ L HPN++++ Y + + L+ EF RG L L ++
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFME 121
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
A L + H VI+RD K N+L+ + K++DFG + P + + GT
Sbjct: 122 ELADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGT 175
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMD 305
Y PE + K D++ GV+ E L G D
Sbjct: 176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALG 208
E+ + QLHHP L+ L + + +L+ EF++ G L + + + + I
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ 157
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEY--NAKLSDFGLAKAGPQGDKTHVSTRVVG 266
A +GL +H S +++ D K NI+ +++ + K+ DFGLA + V+T
Sbjct: 158 ACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---A 212
Query: 267 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
T +AAPE V + +D+++ GV+ +L+G
Sbjct: 213 TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 15/206 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKS-LKPDGLQGHREWVAEVDFLGQLHHP 159
LG+G FG V+ ++N A + V KS L+ +G++ + E++ L HP
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMA-----LKVLFKSQLEKEGVE--HQLRREIEIQSHLRHP 74
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
N++++ Y + + L+ EF RG L L ++ A L + H
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH-- 131
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG 279
VI+RD K N+L+ + K++DFG + P + + GT Y PE +
Sbjct: 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RXMCGTLDYLPPEMIEGK 187
Query: 280 HLTSKSDVYSFGVVLLEILTGRRSMD 305
K D++ GV+ E L G D
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 127/309 (41%), Gaps = 47/309 (15%)
Query: 76 SPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL 135
SP Q FT ++LK +G G +G V K KP SG +AVK +
Sbjct: 12 SPEQHWDFTAEDLKDLGE-------IGRGAYGSVNK--------MVHKP-SGQIMAVKRI 55
Query: 136 KPD-GLQGHREWVAEVDFLGQLHH-PNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRR 193
+ + ++ + ++D + + P +V+ G + + E M+ + + +
Sbjct: 56 RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVY 115
Query: 194 TI---PLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK 250
++ +P KI L K L L + +I+RD K SNILLD N KL DFG++
Sbjct: 116 SVLDDVIPEEILGKITLATVKALNHLKENLK-IIHRDIKPSNILLDRSGNIKLCDFGISG 174
Query: 251 AGPQGDKTHVSTRVVGTYGYAAPEYVMTGH----LTSKSDVYSFGVVLLEILTGRRSMDK 306
Q + TR G Y APE + +SDV+S G+ L E+ TGR K
Sbjct: 175 ---QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK 231
Query: 307 KRPSGEQNLVAWARQYLADKRKLYQIVD---PRLELNYSLKGVQKVSQLAYNCLSRDPKS 363
W + +L Q+V P+L + + CL++D
Sbjct: 232 -----------WNSVF----DQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESK 276
Query: 364 RPSMDEVVK 372
RP E++K
Sbjct: 277 RPKYKELLK 285
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALG 208
EV L QL HPN++KL + + LV E G L + + R + I
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ-KFSEVDAAVIMKQ 112
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTHVSTRVV 265
G +LH +++RD K N+LL+S+ K+ DFGL+ G K +
Sbjct: 113 VLSGTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERL 167
Query: 266 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GT Y APE V+ K DV+S GV+L +L G
Sbjct: 168 GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALG 208
EV L QL HPN++KL + + LV E G L + + R + I
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ-KFSEVDAAVIMKQ 129
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTHVSTRVV 265
G +LH +++RD K N+LL+S+ K+ DFGL+ G K +
Sbjct: 130 VLSGTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERL 184
Query: 266 GTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GT Y APE V+ K DV+S GV+L +L G
Sbjct: 185 GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 128/313 (40%), Gaps = 54/313 (17%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL--KPDGLQGHREWVAEVDFLGQLHH 158
+GEG +G VFK + G VA+K D + + E+ L QL H
Sbjct: 11 IGEGSYGVVFKCRNRDTGQ---------IVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 159 PNLVKLIGYCIEDDQRLLVYEFMTRGSL-ENHLFRRTIPLPWSNRIK-IALGAAKGLAFL 216
PNLV L+ + LV+E+ L E ++R +P + +K I + + F
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVP---EHLVKSITWQTLQAVNFC 118
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK--AGPQGDKTHVSTRVVGTYGYAAPE 274
H + I+RD K NIL+ KL DFG A+ GP + V T Y +PE
Sbjct: 119 HKHN--CIHRDVKPENILITKHSVIKLCDFGFARLLTGP----SDYYDDEVATRWYRSPE 172
Query: 275 YVM-TGHLTSKSDVYSFGVVLLEILTG----------------RRSMDKKRPSGEQNLVA 317
++ DV++ G V E+L+G R+++ P +Q V
Sbjct: 173 LLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQ--VF 230
Query: 318 WARQYLADKRKLYQIVDPR----LELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK- 372
QY + + I DP LEL + + L CL DP R + ++++
Sbjct: 231 STNQYFSGVK----IPDPEDMEPLELKFPNISYPALGLLK-GCLHMDPTERLTCEQLLHH 285
Query: 373 -VLTPLQDLNDLA 384
++++ DLA
Sbjct: 286 PYFENIREIEDLA 298
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 144 REWVAEVDFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNR 202
R E+ + L HP LV L Y +D++ + +V + + G L HL ++ +
Sbjct: 60 RNVFKELQIMQGLEHPFLVNL-WYSFQDEEDMFMVVDLLLGGDLRYHL-QQNVHFKEETV 117
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVST 262
L +L ++ +I+RD K NILLD + ++DF +A P+ +T ++T
Sbjct: 118 KLFICELVMALDYLQ--NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT 173
Query: 263 RVVGTYGYAAPEYVMT---GHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLV--- 316
+ GT Y APE + + D +S GV E+L GRR + + + +V
Sbjct: 174 -MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF 232
Query: 317 ---------AWARQYLADKRKLYQ 331
AW+++ ++ +KL +
Sbjct: 233 ETTVVTYPSAWSQEMVSLLKKLLE 256
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 112/300 (37%), Gaps = 72/300 (24%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 2 DPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTA 55
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 56 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 115
Query: 183 RGSLENHL----------------FRR------TIPLPWSNRI----------KIALGAA 210
G+L +L FR+ IP+ R+
Sbjct: 116 FGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 175
Query: 211 KGLAFLHGGSEPV-IYRDFKT------------------------------SNILLDSEY 239
K L+ + P +Y+DF T NILL +
Sbjct: 176 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 235
Query: 240 NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
K+ DFGLA+ + + APE + T +SDV+SFGV+L EI +
Sbjct: 236 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V + + E T G A K + E+ + L HP
Sbjct: 59 LGTGAFGVVHR--VTERAT-------GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV L +D++ +++YEFM+ G L + + ++ KGL +H +
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 221 EPVIYRDFKTSNILLDSEYN--AKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMT 278
++ D K NI+ ++ + KL DFGL V+T GT +AAPE
Sbjct: 170 --YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEG 224
Query: 279 GHLTSKSDVYSFGVVLLEILTG 300
+ +D++S GV+ +L+G
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSG 246
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 45/233 (19%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF- 152
N + ++G G +G V+KG ++E +P VAVK + ++ E +
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDE------RP-----VAVKVF---SFANRQNFINEKNIY 59
Query: 153 -LGQLHHPNLVKLI--GYCIEDDQR---LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA 206
+ + H N+ + I + D R LLV E+ GSL +L T W + ++A
Sbjct: 60 RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD--WVSSCRLA 117
Query: 207 LGAAKGLAFLH------GGSEPVI-YRDFKTSNILLDSEYNAKLSDFGLA------KAGP 253
+GLA+LH +P I +RD + N+L+ ++ +SDFGL+ +
Sbjct: 118 HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVR 177
Query: 254 QGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS--------DVYSFGVVLLEIL 298
G++ + + VGT Y APE V+ G + + D+Y+ G++ EI
Sbjct: 178 PGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 112/300 (37%), Gaps = 72/300 (24%)
Query: 66 NPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPG 125
+PD P DE C+ L + + + + LG G FG V IE + K
Sbjct: 4 DPDELPLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTA 57
Query: 126 SGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLV-YEFMT 182
+ TVAVK LK HR ++E+ L + HH N+V L+G C + L+V EF
Sbjct: 58 TCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK 117
Query: 183 RGSLENHL----------------FRR------TIPLPWSNRI----------KIALGAA 210
G+L +L FR+ IP+ R+
Sbjct: 118 FGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 177
Query: 211 KGLAFLHGGSEPV-IYRDFKT------------------------------SNILLDSEY 239
K L+ + P +Y+DF T NILL +
Sbjct: 178 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 237
Query: 240 NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
K+ DFGLA+ + + APE + T +SDV+SFGV+L EI +
Sbjct: 238 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V + + E T G A K + E+ + L HP
Sbjct: 165 LGTGAFGVVHR--VTERAT-------GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGS 220
LV L +D++ +++YEFM+ G L + + ++ KGL +H +
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 221 EPVIYRDFKTSNILLDSEYN--AKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMT 278
++ D K NI+ ++ + KL DFGL V+T GT +AAPE
Sbjct: 276 --YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEG 330
Query: 279 GHLTSKSDVYSFGVVLLEILTG 300
+ +D++S GV+ +L+G
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSG 352
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 23/210 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-----EVDFLGQ 155
+GEG +G VFK E T + +LK L E V E+ L +
Sbjct: 10 IGEGTYGTVFKAKNRE------------THEIVALKRVRLDDDDEGVPSSALREICLLKE 57
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAF 215
L H N+V+L D + LV+EF + L+ + L KGL F
Sbjct: 58 LKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 216 LHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEY 275
H S V++RD K N+L++ KL++FGLA+A G + V T Y P+
Sbjct: 117 CH--SRNVLHRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPPDV 172
Query: 276 VMTGHLTSKS-DVYSFGVVLLEILTGRRSM 304
+ L S S D++S G + E+ R +
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 24/226 (10%)
Query: 82 QFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQ 141
+F + N+ LG+G F V + +G+ A K + L
Sbjct: 18 EFMMNASTKFSDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLS 68
Query: 142 GH--REWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI--PL 197
++ E +L HPN+V+L E+ LV++ +T G L + R
Sbjct: 69 ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA 128
Query: 198 PWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQ 254
S+ I+ L + +A+ H S +++R+ K N+LL S+ KL+DFGLA
Sbjct: 129 DASHCIQQIL---ESIAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183
Query: 255 GDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
+ H GT GY +PE + + D+++ GV+L +L G
Sbjct: 184 SEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 36/216 (16%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 63 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 109
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 167
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDK--THVSTRVVG 266
+ LA++H S + +RD K N+LLD + KL DFG AK +G+ +++ +R
Sbjct: 168 FRSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 223
Query: 267 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 224 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 36/216 (16%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 65 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 111
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 169
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDK--THVSTRVVG 266
+ LA++H S + +RD K N+LLD + KL DFG AK +G+ +++ +R
Sbjct: 170 FRSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 225
Query: 267 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 226 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 36/216 (16%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 55 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 101
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 159
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDK--THVSTRVVG 266
+ LA++H S + +RD K N+LLD + KL DFG AK +G+ +++ +R
Sbjct: 160 FRSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 215
Query: 267 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 216 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 36/216 (16%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 165
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDK--THVSTRVVG 266
+ LA++H S + +RD K N+LLD + KL DFG AK +G+ +++ +R
Sbjct: 166 FRSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 221
Query: 267 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 222 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 32/214 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 61 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 165
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ LA++H S + +RD K N+LLD + KL DFG AK +G+ + + +
Sbjct: 166 FRSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 220
Query: 269 GYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 127/354 (35%), Gaps = 110/354 (31%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-EVDF 152
+F P +G GGFG VF+ A+K ++ + RE V EV
Sbjct: 7 DFEPIQCMGRGGFGVVFEA---------KNKVDDCNYAIKRIRLPNRELAREKVMREVKA 57
Query: 153 LGQLHHPNLVKLIGYCI---------EDDQRLLVYE------------------------ 179
L +L HP +V+ + E D+ L E
Sbjct: 58 LAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDP 117
Query: 180 FMTRGS--------------LENHLFRRTIPLPWSNR------------IKIALGAAKGL 213
F T+ + ++ L R+ W NR + I + A+ +
Sbjct: 118 FSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAV 177
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDK------------THVS 261
FLH S+ +++RD K SNI + K+ DFGL A Q ++ TH
Sbjct: 178 EFLH--SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXG 235
Query: 262 TRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQ 321
VGT Y +PE + + + K D++S G++L E+L
Sbjct: 236 Q--VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS--------------------- 272
Query: 322 YLADKRKLYQIVDPRLELNYSLKGVQKVSQ---LAYNCLSRDPKSRPSMDEVVK 372
+ ++ I D R L + L QK Q + + LS P RP ++++
Sbjct: 273 FSTQMERVRIITDVR-NLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 32/214 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 160 NLVKLIGYCIED-DQRLLVYEFMTRGSLENHLFR---------RTIPLPWSNRIKIALGA 209
N+V+L + +++ +VY + + ++R +T+P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ LA++H + +RD K N+LLD + KL DFG AK +G+ + + +
Sbjct: 132 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 186
Query: 269 GYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L KP
Sbjct: 23 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSKP 70
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 71 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 128
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 129 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 116
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 175 TDDEMTGYVATR-----WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 21/211 (9%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-EVDF 152
+FR +LG G F V E+ T VA+K + + L+G + E+
Sbjct: 21 DFR--DVLGTGAFSEVILA--EDKRTQK-------LVAIKCIAKEALEGKEGSMENEIAV 69
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKG 212
L ++ HPN+V L L+ + ++ G L + + + + ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASRLIFQVLDA 128
Query: 213 LAFLHGGSEPVIYRDFKTSNIL---LDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYG 269
+ +LH +++RD K N+L LD + +SDFGL+K G V + GT G
Sbjct: 129 VKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPG 183
Query: 270 YAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE + + D +S GV+ +L G
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 31/232 (13%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N +
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 192 RRTIPLPWSNRIKIAL-GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK 250
+ + + ++ + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 119 XQKLT---DDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLAR 173
Query: 251 AGPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 174 HTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 36/216 (16%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 106 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 152
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 210
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDK--THVSTRVVG 266
+ LA++H S + +RD K N+LLD + KL DFG AK +G+ +++ +R
Sbjct: 211 FRSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 266
Query: 267 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 267 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 136/335 (40%), Gaps = 47/335 (14%)
Query: 51 NRELCAPNEAHLSSDNPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVF 110
N L P EA P D S + Q + + P LG G +G V
Sbjct: 10 NPGLKIPKEAFEQPQTSSTPPRDLDSKA-CISIGNQNFEVKADDLEPIMELGRGAYGVV- 67
Query: 111 KGWIEENGTAPAKPGSGITVAVKSLKPD-GLQGHREWVAEVDF-LGQLHHPNLVKLIGYC 168
E+ P SG +AVK ++ Q + + ++D + + P V G
Sbjct: 68 ----EKMRHVP----SGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL 119
Query: 169 IEDDQRLLVYEFM--TRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYR 226
+ + E M + + + +P KIA+ K L LH VI+R
Sbjct: 120 FREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS-VIHR 178
Query: 227 DFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYV-----MTGHL 281
D K SN+L+++ K+ DFG+ +G D T G Y APE + G+
Sbjct: 179 DVKPSNVLINALGQVKMCDFGI--SGYLVDSV-AKTIDAGCKPYMAPERINPELNQKGY- 234
Query: 282 TSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVD---PRLE 338
+ KSD++S G+ ++E+ R D +W + ++L Q+V+ P+L
Sbjct: 235 SVKSDIWSLGITMIELAILRFPYD-----------SWGTPF----QQLKQVVEEPSPQLP 279
Query: 339 LN-YSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ +S + V SQ CL ++ K RP+ E+++
Sbjct: 280 ADKFSAEFVDFTSQ----CLKKNSKERPTYPELMQ 310
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 21/211 (9%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-EVDF 152
+FR +LG G F V E+ T VA+K + + L+G + E+
Sbjct: 21 DFR--DVLGTGAFSEVILA--EDKRTQK-------LVAIKCIAKEALEGKEGSMENEIAV 69
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKG 212
L ++ HPN+V L L+ + ++ G L + + + + ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASRLIFQVLDA 128
Query: 213 LAFLHGGSEPVIYRDFKTSNIL---LDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYG 269
+ +LH +++RD K N+L LD + +SDFGL+K G V + GT G
Sbjct: 129 VKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPG 183
Query: 270 YAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE + + D +S GV+ +L G
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 46 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 92
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 150
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ LA++H + +RD K N+LLD + KL DFG AK +G+ + + +
Sbjct: 151 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 205
Query: 269 GYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 35 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 81
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 139
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ LA++H + +RD K N+LLD + KL DFG AK +G+ + + +
Sbjct: 140 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 194
Query: 269 GYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 143
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ LA++H + +RD K N+LLD + KL DFG AK +G+ + + +
Sbjct: 144 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 198
Query: 269 GYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 16 QELNKTIWEVPERYQNLSP---IGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 63
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 64 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 121
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARH 179
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 180 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 31/232 (13%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N +
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 118
Query: 192 RRTIPLPWSNRIKIAL-GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAK 250
+ + + ++ + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 119 XQKLT---DDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
Query: 251 AGPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 174 HTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 40 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 86
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 144
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ LA++H + +RD K N+LLD + KL DFG AK +G+ + + +
Sbjct: 145 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSR 199
Query: 269 GYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 36/216 (16%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 32 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 78
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 136
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDK--THVSTRVVG 266
+ LA++H S + +RD K N+LLD + KL DFG AK +G+ +++ +R
Sbjct: 137 FRSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 192
Query: 267 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 193 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 18 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 65
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 66 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 123
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 182 TADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 25/213 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-EVDF 152
+FR +LG G F V E+ T VA+K + + L+G + E+
Sbjct: 21 DFR--DVLGTGAFSEVILA--EDKRTQK-------LVAIKCIAKEALEGKEGSMENEIAV 69
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNR--IKIALGAA 210
L ++ HPN+V L L+ + ++ G L + + + ++ R ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVL 126
Query: 211 KGLAFLHGGSEPVIYRDFKTSNIL---LDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+ +LH +++RD K N+L LD + +SDFGL+K G V + GT
Sbjct: 127 DAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGT 181
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GY APE + + D +S GV+ +L G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 39 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 143
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ LA++H + +RD K N+LLD + KL DFG AK +G+ + + +
Sbjct: 144 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 198
Query: 269 GYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 18 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 65
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 66 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 123
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 182 TADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 116
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 175 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 18 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 65
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 66 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 123
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 182 TADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 16 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 63
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 64 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 121
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARH 179
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 180 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 116
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 175 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 22 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 69
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 70 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 127
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 128 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDXELKILDFGLARH 185
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 186 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 116
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 175 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 17 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 64
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 65 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 122
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 181 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 116
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 175 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 38/232 (16%)
Query: 93 GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+F ++LG+G FG V K A+K ++ + ++EV
Sbjct: 6 SDFEEIAVLGQGAFGQVVKA---------RNALDSRYYAIKKIRHTE-EKLSTILSEVML 55
Query: 153 LGQLHHP-------------NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPW 199
L L+H N VK + + + E+ G+L + + +
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR 115
Query: 200 SNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQG---- 255
++ + L+++H S+ +I+RD K NI +D N K+ DFGLAK +
Sbjct: 116 DEYWRLFRQILEALSYIH--SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 256 --DKTHVS------TRVVGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEIL 298
D ++ T +GT Y A E + TGH K D+YS G++ E++
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ LA++H + +RD K N+LLD + KL DFG AK +G+ + + +
Sbjct: 132 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 186
Query: 269 GYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 17 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 64
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 65 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 122
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDSELKILDFGLARH 180
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 181 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 22 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 69
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 70 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 127
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 128 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 185
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 186 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 103/242 (42%), Gaps = 32/242 (13%)
Query: 71 PTDEKSPC---QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSG 127
P ++ P Q L T E+ N P +G G +G V A +G
Sbjct: 2 PMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTG 49
Query: 128 ITVAVKSL-KP-DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEF 180
+ VAVK L +P + + E+ L + H N++ L+ +E+ + +
Sbjct: 50 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 109
Query: 181 MTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN 240
+ L N + L + + +GL ++H +I+RD K SN+ ++ +
Sbjct: 110 LMGADLNN--IVKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCE 165
Query: 241 AKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILT 299
K+ DFGLA+ +V+TR Y APE ++ H D++S G ++ E+LT
Sbjct: 166 LKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 300 GR 301
GR
Sbjct: 221 GR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 18 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 65
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 66 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 123
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 124 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 181
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 182 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 16 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 63
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 64 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 121
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 179
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 180 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 23 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 70
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 71 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 128
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 129 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 10 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 57
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 58 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 115
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 116 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 173
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 174 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 23 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 70
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 71 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 128
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 129 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 186
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 13 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 60
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 61 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 118
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 177 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 16 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 63
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 64 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 121
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 122 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 179
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 180 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 17 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 64
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 65 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 122
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 123 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 180
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 181 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 24/216 (11%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAE 149
+ N+ LG+G F V + +G+ A K + L ++ E
Sbjct: 5 SDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLERE 55
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI--PLPWSNRIKIAL 207
+L HPN+V+L E+ LV++ +T G L + R S+ I+ L
Sbjct: 56 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL 115
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTHVSTRV 264
+ +A+ H S +++R+ K N+LL S+ KL+DFGLA + H
Sbjct: 116 ---ESIAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GF 167
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GT GY +PE + + D+++ GV+L +L G
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 13 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 60
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 61 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 118
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 176
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 177 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 28 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 74
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 132
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ LA++H + +RD K N+LLD + KL DFG AK +G+ + + +
Sbjct: 133 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 187
Query: 269 GYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 34 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 81
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 82 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 139
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 140 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 197
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 198 TDDEMXGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 116
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 175 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 34 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 81
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 82 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 139
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 140 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 197
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 198 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 24/216 (11%)
Query: 92 TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGH--REWVAE 149
+ N+ LG+G F V + +G+ A K + L ++ E
Sbjct: 4 SDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLERE 54
Query: 150 VDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI--PLPWSNRIKIAL 207
+L HPN+V+L E+ LV++ +T G L + R S+ I+ L
Sbjct: 55 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL 114
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTHVSTRV 264
+ +A+ H S +++R+ K N+LL S+ KL+DFGLA + H
Sbjct: 115 ---ESIAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GF 166
Query: 265 VGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GT GY +PE + + D+++ GV+L +L G
Sbjct: 167 AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 116
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 175 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ LA++H + +RD K N+LLD + KL DFG AK +G+ + + +
Sbjct: 132 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 186
Query: 269 GYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ LA++H + +RD K N+LLD + KL DFG AK +G+ + + +
Sbjct: 132 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 186
Query: 269 GYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 36/254 (14%)
Query: 56 APNEAHLSSDNPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIE 115
P +H+S + P Q L T E+ N P +G G +G V
Sbjct: 15 VPRGSHMSQERP-------TFYRQELNKTIWEVPERYQNLSP---VGSGAYGSV------ 58
Query: 116 ENGTAPAKPGSGITVAVKSL-KP-DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYC 168
A +G+ VAVK L +P + + E+ L + H N++ L+
Sbjct: 59 ---CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 115
Query: 169 IEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDF 228
+E+ + + + L N + L + + +GL ++H S +I+RD
Sbjct: 116 LEEFNDVYLVTHLMGADLNN--IVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDL 171
Query: 229 KTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDV 287
K SN+ ++ + K+ DFGLA+ +V+TR Y APE ++ H D+
Sbjct: 172 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDI 226
Query: 288 YSFGVVLLEILTGR 301
+S G ++ E+LTGR
Sbjct: 227 WSVGCIMAELLTGR 240
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 116
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 175 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 8 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 55
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 56 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 113
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 114 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 171
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 172 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 32/214 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 31 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 77
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 135
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ LA++H S + +RD K N+LLD + KL DFG AK +G+ + + +
Sbjct: 136 FRSLAYIH--SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 190
Query: 269 GYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 13 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 60
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 61 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 118
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDSELKILDFGLARH 176
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 177 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 45/286 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G GG VF+ E+ K V ++ L +R +A ++ L Q H
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ-HSDK 117
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLE-NHLFRRTIPL-PWSNR--IKIALGAAKGLAFL 216
+++L Y I D +Y M G+++ N ++ + PW + K L A +
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-HQ 173
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYV 276
HG +++ D K +N L+ + KL DFG+A + V VGT Y PE +
Sbjct: 174 HG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
Query: 277 -----------MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLAD 325
++ KSDV+S G +L + G+ +Q +
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQ 273
Query: 326 KRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
KL+ I+DP E+ + + + + CL RDPK R S+ E++
Sbjct: 274 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 32/214 (14%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQ R E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGTY 268
+ LA++H + +RD K N+LLD + KL DFG AK +G+ + + +
Sbjct: 132 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSR 186
Query: 269 GYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 7 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 54
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 55 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 112
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 113 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 171 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 36/254 (14%)
Query: 56 APNEAHLSSDNPDPAPTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIE 115
P +H+S + P Q L T E+ N P +G G +G V
Sbjct: 14 VPRGSHMSQERP-------TFYRQELNKTIWEVPERYQNLSP---VGSGAYGSV------ 57
Query: 116 ENGTAPAKPGSGITVAVKSL-KP-DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYC 168
A +G+ VAVK L +P + + E+ L + H N++ L+
Sbjct: 58 ---CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS 114
Query: 169 IEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDF 228
+E+ + + + L N + L + + +GL ++H S +I+RD
Sbjct: 115 LEEFNDVYLVTHLMGADLNN--IVKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDL 170
Query: 229 KTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDV 287
K SN+ ++ + K+ DFGLA+ +V+TR Y APE ++ H D+
Sbjct: 171 KPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDI 225
Query: 288 YSFGVVLLEILTGR 301
+S G ++ E+LTGR
Sbjct: 226 WSVGCIMAELLTGR 239
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 8 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 55
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 56 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 113
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 114 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 171
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 172 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 86 QELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE 145
+E+ AT R LG G FG V + +E+ T G AVK ++ + +
Sbjct: 90 EEVHWATHQLR----LGRGSFGEVHR--MEDKQT-------GFQCAVKKVRLEVFRAE-- 134
Query: 146 WVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKI 205
E+ L P +V L G E + E + GSL L + LP +R
Sbjct: 135 ---ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQGCLP-EDRALY 189
Query: 206 ALGAA-KGLAFLHGGSEPVIYRDFKTSNILLDSE-YNAKLSDFGLAKA-GPQGDKTHVST 262
LG A +GL +LH S +++ D K N+LL S+ +A L DFG A P G + T
Sbjct: 190 YLGQALEGLEYLH--SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLT 247
Query: 263 --RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
+ GT + APE V+ +K DV+S ++L +L G
Sbjct: 248 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 25/213 (11%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA-EVDF 152
+FR +LG G F V E+ T VA+K + L+G + E+
Sbjct: 21 DFR--DVLGTGAFSEVILA--EDKRTQK-------LVAIKCIAKKALEGKEGSMENEIAV 69
Query: 153 LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNR--IKIALGAA 210
L ++ HPN+V L L+ + ++ G L + + + ++ R ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVL 126
Query: 211 KGLAFLHGGSEPVIYRDFKTSNIL---LDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGT 267
+ +LH +++RD K N+L LD + +SDFGL+K G V + GT
Sbjct: 127 DAVKYLHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGT 181
Query: 268 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GY APE + + D +S GV+ +L G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 9 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 56
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 57 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 114
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 115 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 172
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 173 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 86 QELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE 145
+E+ AT R LG G FG V + +E+ T G AVK ++ + +
Sbjct: 71 EEVHWATHQLR----LGRGSFGEVHR--MEDKQT-------GFQCAVKKVRLEVFRAE-- 115
Query: 146 WVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKI 205
E+ L P +V L G E + E + GSL L + LP +R
Sbjct: 116 ---ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQGCLP-EDRALY 170
Query: 206 ALGAA-KGLAFLHGGSEPVIYRDFKTSNILLDSE-YNAKLSDFGLAKA-GPQGDKTHVST 262
LG A +GL +LH S +++ D K N+LL S+ +A L DFG A P G + T
Sbjct: 171 YLGQALEGLEYLH--SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLT 228
Query: 263 --RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
+ GT + APE V+ +K DV+S ++L +L G
Sbjct: 229 GDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDK--THVSTRVVG 266
+ LA++H + +RD K N+LLD + KL DFG AK +G+ +++ +R
Sbjct: 132 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 267 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 36/216 (16%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG V++ + + SG VA+K + LQG E+ + +L H
Sbjct: 27 VIGNGSFGVVYQAKLCD---------SGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 160 NLVKLIGYCIEDDQR--------LLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGA 209
N+V+L + ++ +L Y T + H R +T+P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDK--THVSTRVVG 266
+ LA++H + +RD K N+LLD + KL DFG AK +G+ +++ +R
Sbjct: 132 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 267 TYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + TS DV+S G VL E+L G+
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI--PLPWSNRIKIALGAAKG 212
+L HPN+V+L E+ LV++ +T G L + R S+ I+ L +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL---ES 117
Query: 213 LAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTHVSTRVVGTYG 269
+A+ H S +++R+ K N+LL S+ KL+DFGLA + H GT G
Sbjct: 118 IAYCH--SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPG 172
Query: 270 YAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y +PE + + D+++ GV+L +L G
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G G FG VF+ + E+ VA+K + LQ R E+ + + HP
Sbjct: 47 VIGNGSFGVVFQAKLVESD----------EVAIKKV----LQDKRFKNRELQIMRIVKHP 92
Query: 160 NLVKLIGYCIED----DQRLL------VYEFMTRGSLENHLFRRTIPLPWSNRIKIAL-G 208
N+V L + + D+ L V E + R S ++T+P+ IK+ +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL---IKLYMYQ 149
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAKAGPQGDKTHVSTRVVGT 267
+ LA++H S + +RD K N+LLD KL DFG AK G+ + + +
Sbjct: 150 LLRSLAYIH--SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSXICS 204
Query: 268 YGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGR 301
Y APE + + T+ D++S G V+ E++ G+
Sbjct: 205 RYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 45/286 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G GG VF+ E+ K V ++ L +R +A ++ L Q H
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ-HSDK 117
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLE-NHLFRRTIPL-PWSNR--IKIALGAAKGLAFL 216
+++L Y I D +Y M G+++ N ++ + PW + K L A +
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-HQ 173
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYV 276
HG +++ D K +N L+ + KL DFG+A + V VGT Y PE +
Sbjct: 174 HG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
Query: 277 -----------MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLAD 325
++ KSDV+S G +L + G+ +Q +
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQ 273
Query: 326 KRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
KL+ I+DP E+ + + + + CL RDPK R S+ E++
Sbjct: 274 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLG--QLH 157
+G+G +G V++G W EN VAVK + + W E + L
Sbjct: 45 VGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWFRETELYNTVMLR 89
Query: 158 HPNLVKLIGYCI----EDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
H N++ I + Q L+ + GSL ++L T+ + ++I L A GL
Sbjct: 90 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT--VSCLRIVLSIASGL 147
Query: 214 AFLH------GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQG-DKTHVSTR-VV 265
A LH G + +RD K+ NIL+ ++D GLA Q ++ V V
Sbjct: 148 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 207
Query: 266 GTYGYAAPEY------VMTGHLTSKSDVYSFGVVLLEILTGRRSM------DKKRPSGEQ 313
GT Y APE V + D+++FG+VL E+ RR + D K P +
Sbjct: 208 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYD- 264
Query: 314 NLVAWARQYLADKRKLYQIVDPRLELN---YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
V D RK+ + R + +S + +++L C ++P +R + +
Sbjct: 265 --VVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 322
Query: 371 VKVLTPL 377
K LT +
Sbjct: 323 KKTLTKI 329
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+GL ++H +I+RD K SN+ ++ + K+ DFGLA+ +V+TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 271 AAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+GL ++H +I+RD K SN+ ++ + K+ DFGLA+ +V+TR Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 271 AAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
APE ++ H D++S G ++ E+LTGR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+GL ++H +I+RD K SN+ ++ + K+ DFGLA+ +V+TR Y
Sbjct: 146 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 198
Query: 271 AAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
APE ++ H D++S G ++ E+LTGR
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 116
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
++ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGL +
Sbjct: 117 VKSQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDSELKILDFGLCRH 174
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 175 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+GL ++H S +I+RD K SN+ ++ + K+ DFGLA+ +V+TR Y
Sbjct: 156 RGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 208
Query: 271 AAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
APE ++ H D++S G ++ E+LTGR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQG------DKTHVS--- 261
+ L+++H S+ +I+RD K NI +D N K+ DFGLAK + D ++
Sbjct: 127 EALSYIH--SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 262 ---TRVVGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEIL 298
T +GT Y A E + TGH K D+YS G++ E++
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+GL ++H S +I+RD K SN+ ++ + K+ DFGLA+ +V+TR Y
Sbjct: 155 RGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 207
Query: 271 AAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
APE ++ H D++S G ++ E+LTGR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 154 GQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
G+L P++V + + E D +L V + G RR PL +A+ G
Sbjct: 89 GRLQEPHVVPIHDFG-EIDGQLYVDXRLINGVDLAAXLRRQGPLAPPR--AVAIVRQIGS 145
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
A + +RD K NIL+ ++ A L DFG+A A T + VGT Y AP
Sbjct: 146 ALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN-TVGTLYYXAP 204
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTG 300
E H T ++D+Y+ VL E LTG
Sbjct: 205 ERFSESHATYRADIYALTCVLYECLTG 231
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+GL ++H S +I+RD K SN+ ++ + K+ DFGLA+ +V+TR Y
Sbjct: 132 RGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 271 AAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
APE ++ H D++S G ++ E+LTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+GL ++H S +I+RD K SN+ ++ + K+ DFGLA+ +V+TR Y
Sbjct: 132 RGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 271 AAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
APE ++ H D++S G ++ E+LTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 130 VAVKSL-KP-DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMT 182
VAVK L +P L R E+ L L H N++ L+ IED + + +
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 183 RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAK 242
L N ++ L + + +GL ++H +I+RD K SN+ ++ + +
Sbjct: 116 GADLNN--IVKSQALSDEHVQFLVYQLLRGLKYIHSAG--IIHRDLKPSNVAVNEDSELR 171
Query: 243 LSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+L G+
Sbjct: 172 ILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLG--QLH 157
+G+G +G V++G W EN VAVK + + W E + L
Sbjct: 16 VGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWFRETELYNTVMLR 60
Query: 158 HPNLVKLIGYCI----EDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
H N++ I + Q L+ + GSL ++L T+ + ++I L A GL
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT--VSCLRIVLSIASGL 118
Query: 214 AFLH------GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQG-DKTHVSTR-VV 265
A LH G + +RD K+ NIL+ ++D GLA Q ++ V V
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178
Query: 266 GTYGYAAPEY------VMTGHLTSKSDVYSFGVVLLEILTGRRSM------DKKRPSGEQ 313
GT Y APE V + D+++FG+VL E+ RR + D K P +
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYD- 235
Query: 314 NLVAWARQYLADKRKLYQIVDPRLELN---YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
V D RK+ + R + +S + +++L C ++P +R + +
Sbjct: 236 --VVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293
Query: 371 VKVLTPL 377
K LT +
Sbjct: 294 KKTLTKI 300
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLG--QLH 157
+G+G +G V++G W EN VAVK + + W E + L
Sbjct: 16 VGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWFRETELYNTVMLR 60
Query: 158 HPNLVKLIGYCI----EDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
H N++ I + Q L+ + GSL ++L T+ + ++I L A GL
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDT--VSCLRIVLSIASGL 118
Query: 214 AFLH------GGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQG-DKTHVSTR-VV 265
A LH G + +RD K+ NIL+ ++D GLA Q ++ V V
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178
Query: 266 GTYGYAAPEY------VMTGHLTSKSDVYSFGVVLLEILTGRRSM------DKKRPSGEQ 313
GT Y APE V + D+++FG+VL E+ RR + D K P +
Sbjct: 179 GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYD- 235
Query: 314 NLVAWARQYLADKRKLYQIVDPRLELN---YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
V D RK+ + R + +S + +++L C ++P +R + +
Sbjct: 236 --VVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293
Query: 371 VKVLTPL 377
K LT +
Sbjct: 294 KKTLTKI 300
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+GL ++H +I+RD K SN+ ++ + K+ DFGLA+ +V+TR Y
Sbjct: 165 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 217
Query: 271 AAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
APE ++ H D++S G ++ E+LTGR
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 116
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ DFGLA+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARH 174
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 175 TDDEMTGXVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 45/286 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G GG VF+ E+ K V ++ L +R +A ++ L Q H
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ-HSDK 70
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLE-NHLFRRTIPL-PWSNR--IKIALGAAKGLAFL 216
+++L Y I D +Y M G+++ N ++ + PW + K L A +
Sbjct: 71 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-HQ 126
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYV 276
HG +++ D K +N L+ + KL DFG+A + V VGT Y PE +
Sbjct: 127 HG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181
Query: 277 -----------MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLAD 325
++ KSDV+S G +L + G+ +Q +
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQ 226
Query: 326 KRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
KL+ I+DP E+ + + + + CL RDPK R S+ E++
Sbjct: 227 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 116
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ D+GLA+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARH 174
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 175 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD 138
Q L T E+ RP +G G +G V + A+ + V S
Sbjct: 9 QELNKTVWEVPQRLQGLRP---VGSGAYGSVCSAY-------DARLRQKVAVKKLSRPFQ 58
Query: 139 GLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLFRR 193
L R E+ L L H N++ L+ IED + + + L N +
Sbjct: 59 SLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN--IVK 116
Query: 194 TIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGP 253
L + + +GL ++H +I+RD K SN+ ++ + ++ DFGLA+
Sbjct: 117 CQALSDEHVQFLVYQLLRGLKYIHSAG--IIHRDLKPSNVAVNEDCELRILDFGLARQAD 174
Query: 254 QGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+ +V+TR Y APE ++ H D++S G ++ E+L G+
Sbjct: 175 EEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 45/286 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G GG VF+ E+ K V ++ L +R +A ++ L Q H
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ-HSDK 73
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLE-NHLFRRTIPL-PWSNR--IKIALGAAKGLAFL 216
+++L Y I D +Y M G+++ N ++ + PW + K L A +
Sbjct: 74 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-HQ 129
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYV 276
HG +++ D K +N L+ + KL DFG+A + V VGT Y PE +
Sbjct: 130 HG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 184
Query: 277 -----------MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLAD 325
++ KSDV+S G +L + G+ +Q +
Sbjct: 185 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQ 229
Query: 326 KRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
KL+ I+DP E+ + + + + CL RDPK R S+ E++
Sbjct: 230 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 130 VAVKSL-KP-DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMT 182
VAVK L +P L R E+ L L H N++ L+ IED + + +
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 183 RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAK 242
L N + L + + +GL ++H +I+RD K SN+ ++ + +
Sbjct: 116 GADLNN--IVKCQALSDEHVQFLVYQLLRGLKYIHSAG--IIHRDLKPSNVAVNEDSELR 171
Query: 243 LSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+L G+
Sbjct: 172 ILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSN-RIK-IA 206
E+ L + H N++ L+ Y+F ++ + L +S +I+ +
Sbjct: 73 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLV 132
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG 266
KGL ++H V++RD K N+ ++ + K+ DFGLA+ +V TR
Sbjct: 133 YQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR--- 187
Query: 267 TYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
Y APE +++ H D++S G ++ E+LTG+
Sbjct: 188 --WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 45/286 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G GG VF+ E+ K V ++ L +R +A ++ L Q H
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ-HSDK 89
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLE-NHLFRRTIPL-PWSNR--IKIALGAAKGLAFL 216
+++L Y I D +Y M G+++ N ++ + PW + K L A +
Sbjct: 90 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-HQ 145
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYV 276
HG +++ D K +N L+ + KL DFG+A + V VGT Y PE +
Sbjct: 146 HG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 200
Query: 277 -----------MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLAD 325
++ KSDV+S G +L + G+ +Q +
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQ 245
Query: 326 KRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
KL+ I+DP E+ + + + + CL RDPK R S+ E++
Sbjct: 246 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 45/286 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G GG VF+ E+ K V ++ L +R +A ++ L Q H
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ-HSDK 69
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLE-NHLFRRTIPL-PWSNR--IKIALGAAKGLAFL 216
+++L Y I D +Y M G+++ N ++ + PW + K L A +
Sbjct: 70 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-HQ 125
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYV 276
HG +++ D K +N L+ + KL DFG+A + V VGT Y PE +
Sbjct: 126 HG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 180
Query: 277 -----------MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLAD 325
++ KSDV+S G +L + G+ +Q +
Sbjct: 181 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQ 225
Query: 326 KRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
KL+ I+DP E+ + + + + CL RDPK R S+ E++
Sbjct: 226 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E+M G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + K++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 21/217 (9%)
Query: 90 SATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG--HREWV 147
S T ++ +G+G F V + K +G A K + L H++
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRC---------VKLCTGHEYAAKIINTKKLSARDHQKLE 51
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
E L H N+V+L E+ LV++ +T G L F + + + +
Sbjct: 52 REARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASH 107
Query: 208 GAAKGL-AFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTHVSTR 263
+ L A LH V++RD K N+LL S+ KL+DFGLA QGD+
Sbjct: 108 CIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQ-QAWFG 165
Query: 264 VVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GT GY +PE + D+++ GV+L +L G
Sbjct: 166 FAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 23/205 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V + +++ T G AVK ++ + + V E+ L P
Sbjct: 80 LGRGSFGEVHR--MKDKQT-------GFQCAVKKVRLEVFR-----VEELVACAGLSSPR 125
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAA-KGLAFLHGG 219
+V L G E + E + GSL L ++ LP +R LG A +GL +LH
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLP-EDRALYYLGQALEGLEYLH-- 181
Query: 220 SEPVIYRDFKTSNILLDSEYN-AKLSDFGLAKA-GPQGDKTHVST--RVVGTYGYAAPEY 275
+ +++ D K N+LL S+ + A L DFG A P G + T + GT + APE
Sbjct: 182 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 276 VMTGHLTSKSDVYSFGVVLLEILTG 300
VM +K D++S ++L +L G
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E+M G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + K++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 43/249 (17%)
Query: 85 FQELKSA--TGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKP--DGL 140
FQ +K+ N+ ++G G +GYV+ + + VA+K + + L
Sbjct: 16 FQGIKNVHVPDNYIIKHLIGRGSYGYVYLAY---------DKNTEKNVAIKKVNRMFEDL 66
Query: 141 QGHREWVAEVDFLGQLHHPNLVKLIGYCIEDD----QRLLVYEFMTRGSLENHLFRRTIP 196
+ + E+ L +L +++L I DD L + + L+ LF+ I
Sbjct: 67 IDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK-LFKTPIF 125
Query: 197 LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA----- 251
L + I G F+H +I+RD K +N LL+ + + K+ DFGLA+
Sbjct: 126 LTEEHIKTILYNLLLGENFIHESG--IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK 183
Query: 252 --------------GPQGD--KTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSFGVVL 294
GP K +++ VV T Y APE ++ +KS D++S G +
Sbjct: 184 DTNIVNDLEENEEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIF 242
Query: 295 LEILTGRRS 303
E+L +S
Sbjct: 243 AELLNMLQS 251
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 89/207 (42%), Gaps = 14/207 (6%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
++G+G F V + E G A I K GL + E L HP
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFA---VKIVDVAKFTSSPGLST-EDLKREASICHMLKHP 86
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRI--KIALGAAKGLAFL 216
++V+L+ D +V+EFM L + +R +S + + L +
Sbjct: 87 HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNA---KLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAP 273
H + +I+RD K N+LL S+ N+ KL DFG+A G+ V+ VGT + AP
Sbjct: 147 HDNN--IIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGGRVGTPHFMAP 202
Query: 274 EYVMTGHLTSKSDVYSFGVVLLEILTG 300
E V DV+ GV+L +L+G
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+GL ++H +I+RD K SN+ ++ + K+ DFGLA+ V+TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 188
Query: 271 AAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+GL ++H +I+RD K SN+ ++ + K+ DFGLA+ V+TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 188
Query: 271 AAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+GL ++H S +I+RD K SN+ ++ + K+ DFGLA+ V+TR Y
Sbjct: 156 RGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----WY 208
Query: 271 AAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
APE ++ H D++S G ++ E+LTGR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+GL ++H S +I+RD K SN+ ++ + K+ DFGLA+ V+TR Y
Sbjct: 132 RGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 184
Query: 271 AAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
APE ++ H D++S G ++ E+LTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + G+G A K +K L R V+ EV+ L
Sbjct: 13 LGSGQFAIVRKC---------RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ HPN++ L +L+ E ++ G L + L + L + G+
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVH 122
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S+ + + D K NI LLD KL DFG+A G++ + GT +
Sbjct: 123 YLH--SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEF 177
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA--GPQGDKTHVSTRVVGTY 268
+GL ++H VI+RD K SN+L++ K+ DFG+A+ + + T V T
Sbjct: 170 RGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 269 GYAAPEYVMTGH-LTSKSDVYSFGVVLLEILTGRR 302
Y APE +++ H T D++S G + E+L R+
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G F V + G + + K + H++ E L HPN
Sbjct: 30 LGKGAFSVVRR-------CVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 82
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL-AFLHGG 219
+V+L E+ L+++ +T G LF + + + + + L A LH
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGE----LFEDIVAREYYSEADASHCIQQILEAVLHCH 138
Query: 220 SEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYV 276
V++RD K N+LL S+ KL+DFGLA +G++ GT GY +PE +
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQ-QAWFGFAGTPGYLSPEVL 196
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
D+++ GV+L +L G
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVG 220
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSN-RIK-IA 206
E+ L + H N++ L+ Y+F ++ + + +S +I+ +
Sbjct: 91 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLV 150
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG 266
KGL ++H V++RD K N+ ++ + K+ DFGLA+ +V TR
Sbjct: 151 YQMLKGLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR--- 205
Query: 267 TYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
Y APE +++ H D++S G ++ E+LTG+
Sbjct: 206 --WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 23/206 (11%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+LG G F VF + +G A+K +K E+ L ++ H
Sbjct: 16 VLGSGAFSEVF---------LVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHE 66
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP--WSNRIKIALGAAKGLAFLH 217
N+V L LV + ++ G L + + R + S I+ L A K +LH
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVK---YLH 123
Query: 218 GGSEPVIYRDFKTSNIL-LDSEYNAKL--SDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
+++RD K N+L L E N+K+ +DFGL+K G + + GT GY APE
Sbjct: 124 ENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVAPE 177
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTG 300
+ + D +S GV+ +L G
Sbjct: 178 VLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 117/286 (40%), Gaps = 45/286 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G GG VF+ E+ K V ++ L +R +A ++ L Q H
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ-HSDK 89
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLE-NHLFRRTIPL-PWSNR--IKIALGAAKGLAFL 216
+++L Y I D +Y M G+++ N ++ + PW + K L A +
Sbjct: 90 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-HQ 145
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYV 276
HG +++ D K +N L+ + KL DFG+A V VGT Y PE +
Sbjct: 146 HG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAI 200
Query: 277 -----------MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLAD 325
++ KSDV+S G +L + G+ +Q +
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQ 245
Query: 326 KRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
KL+ I+DP E+ + + + + CL RDPK R S+ E++
Sbjct: 246 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + G+G A K +K L R V+ EV+ L
Sbjct: 20 LGSGQFAIVRKC---------RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 70
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ HPN++ L +L+ E ++ G L + L + L + G+
Sbjct: 71 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVH 129
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S+ + + D K NI LLD KL DFG+A G++ + GT +
Sbjct: 130 YLH--SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEF 184
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 117/286 (40%), Gaps = 45/286 (15%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G GG VF+ E+ K V ++ L +R +A ++ L Q H
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ-HSDK 117
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLE-NHLFRRTIPL-PWSNR--IKIALGAAKGLAFL 216
+++L Y I D +Y M G+++ N ++ + PW + K L A +
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI-HQ 173
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYV 276
HG +++ D K +N L+ + KL DFG+A + V VG Y PE +
Sbjct: 174 HG----IVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAI 228
Query: 277 -----------MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLAD 325
++ KSDV+S G +L + G+ +Q +
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---------------QQIINQ 273
Query: 326 KRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
KL+ I+DP E+ + + + + CL RDPK R S+ E++
Sbjct: 274 ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIE--DDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA 206
E+ L +L HPN+VKL+ + +D +V+E + +G + PL
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME--VPTLKPLSEDQARFYF 143
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG 266
KG+ +LH + +I+RD K SN+L+ + + K++DFG++ D +T VG
Sbjct: 144 QDLIKGIEYLH--YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT--VG 199
Query: 267 TYGYAAPEYVMTGH--LTSKS-DVYSFGVVLLEILTGR 301
T + APE + + K+ DV++ GV L + G+
Sbjct: 200 TPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 23/205 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V + +++ T G AVK ++ + + V E+ L P
Sbjct: 66 VGRGSFGEVHR--MKDKQT-------GFQCAVKKVRLEVFR-----VEELVACAGLSSPR 111
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAA-KGLAFLHGG 219
+V L G E + E + GSL L ++ LP +R LG A +GL +LH
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLP-EDRALYYLGQALEGLEYLH-- 167
Query: 220 SEPVIYRDFKTSNILLDSEYN-AKLSDFGLAKA-GPQGDKTHVST--RVVGTYGYAAPEY 275
+ +++ D K N+LL S+ + A L DFG A P G + T + GT + APE
Sbjct: 168 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 276 VMTGHLTSKSDVYSFGVVLLEILTG 300
VM +K D++S ++L +L G
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+LG+G +G V+ G N + +A+K + + + E+ L H
Sbjct: 29 VLGKGTYGIVYAGRDLSNQ---------VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 79
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK---GLAFL 216
N+V+ +G E+ + E + GSL L + PL N I + GL +L
Sbjct: 80 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLK-DNEQTIGFYTKQILEGLKYL 138
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAK--AGPQGDKTHVSTRVVGTYGYAAP 273
H +++RD K N+L+++ K+SDFG +K AG + GT Y AP
Sbjct: 139 HDNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG----INPCTETFTGTLQYMAP 192
Query: 274 EYVMTG--HLTSKSDVYSFGVVLLEILTGR 301
E + G +D++S G ++E+ TG+
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + G+G A K +K L R V+ EV+ L
Sbjct: 34 LGSGQFAIVRKC---------RQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILR 84
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ HPN++ L +L+ E ++ G L + L + L + G+
Sbjct: 85 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVH 143
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S+ + + D K NI LLD KL DFG+A G++ + GT +
Sbjct: 144 YLH--SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEF 198
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 199 VAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA--GPQGDKTHVSTRVVGTY 268
+GL ++H VI+RD K SN+L++ K+ DFG+A+ + + T V T
Sbjct: 169 RGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 269 GYAAPEYVMTGH-LTSKSDVYSFGVVLLEILTGRR 302
Y APE +++ H T D++S G + E+L R+
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 109/295 (36%), Gaps = 72/295 (24%)
Query: 71 PTDEKSPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITV 130
P DE C+ L + + + + LG G FG V IE + K + TV
Sbjct: 2 PLDEH--CERLPYDASKWEFPRDRLKLGKPLGRGAFGQV----IEADAFGIDKTATCRTV 55
Query: 131 AVKSLKPDGLQG-HREWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVY-EFMTRGSLE 187
AVK LK HR ++E+ L + HH N+V L+G C + L+V EF G+L
Sbjct: 56 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 115
Query: 188 NHL----------------FRR------TIPLPWSNRI----------KIALGAAKGLAF 215
+L FR+ IP+ R+ K L+
Sbjct: 116 TYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD 175
Query: 216 LHGGSEPV-IYRDFKT------------------------------SNILLDSEYNAKLS 244
+ P +Y+DF T NILL + K+
Sbjct: 176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 235
Query: 245 DFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILT 299
DFGLA+ + + APE + T +SDV+SFGV+L EI +
Sbjct: 236 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 50/300 (16%)
Query: 88 LKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPD-GLQGHREW 146
++ + P LG G +G V E+ P SG +AVK ++ Q +
Sbjct: 2 MEVKADDLEPIMELGRGAYGVV-----EKMRHVP----SGQIMAVKRIRATVNSQEQKRL 52
Query: 147 VAEVDF-LGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI----PLPWSN 201
+ ++D + + P V G + + E M + +++ I +P
Sbjct: 53 LMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSL--DKFYKQVIDKGQTIPEDI 110
Query: 202 RIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVS 261
KIA+ K L LH VI+RD K SN+L+++ K+ DFG++ +
Sbjct: 111 LGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID 169
Query: 262 TRVVGTYGYAAPEYV-----MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLV 316
G Y APE + G+ + KSD++S G+ ++E+ R D
Sbjct: 170 A---GCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYD----------- 214
Query: 317 AWARQYLADKRKLYQIVD---PRLELN-YSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+W + ++L Q+V+ P+L + +S + V SQ CL ++ K RP+ E+++
Sbjct: 215 SWGTPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQ----CLKKNSKERPTYPELMQ 266
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 105/259 (40%), Gaps = 25/259 (9%)
Query: 125 GSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDD--QRLLVYEFMT 182
G+ I V V ++ + R++ E L HPN++ ++G C L+ +
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 183 RGSLENHLFRRT-IPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRD-FKTSNILLDSEYN 240
GSL N L T + S +K AL A+G AFLH EP+I R + ++ +D +
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH-TLEPLIPRHALNSRSVXIDEDXT 151
Query: 241 AKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
A++S + + + + V PE +D +SF V+L E++T
Sbjct: 152 ARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTN----RRSADXWSFAVLLWELVT- 206
Query: 301 RRSMDKKRPSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRD 360
E + + K L + + P + S VS+L C + D
Sbjct: 207 ----------REVPFADLSNXEIGXKVAL-EGLRPTIPPGIS----PHVSKLXKICXNED 251
Query: 361 PKSRPSMDEVVKVLTPLQD 379
P RP D +V +L QD
Sbjct: 252 PAKRPKFDXIVPILEKXQD 270
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 113/271 (41%), Gaps = 31/271 (11%)
Query: 31 IPRTSLVYDAATETRYLNASNRELCAPNEAHLSSDNPDPAPTDEKSPCQLLQFTFQELKS 90
+PR S + +AA + S +E A D T ++ QL QF +K+
Sbjct: 15 VPRGSHMGNAAAAKK---GSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQF--DRIKT 69
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEV 150
LG G FG V +E+G A VK + + + + V
Sbjct: 70 ----------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 119
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGA 209
+F P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 120 NF------PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQI 171
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYG 269
+LH S +IYRD K N+L+D + +++DFG AK T + GT
Sbjct: 172 VLTFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT-----LCGTPE 224
Query: 270 YAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 23/205 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
+G G FG V + +++ T G AVK ++ + + V E+ L P
Sbjct: 82 VGRGSFGEVHR--MKDKQT-------GFQCAVKKVRLEVFR-----VEELVACAGLSSPR 127
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAA-KGLAFLHGG 219
+V L G E + E + GSL L ++ LP +R LG A +GL +LH
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLP-EDRALYYLGQALEGLEYLH-- 183
Query: 220 SEPVIYRDFKTSNILLDSEYN-AKLSDFGLAKA-GPQGDKTHVST--RVVGTYGYAAPEY 275
+ +++ D K N+LL S+ + A L DFG A P G + T + GT + APE
Sbjct: 184 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 276 VMTGHLTSKSDVYSFGVVLLEILTG 300
VM +K D++S ++L +L G
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 116
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ FGLA+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILGFGLARH 174
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 175 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 38/213 (17%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA-- 206
E++ L +L+HP ++K+ + +D +V E M G LF + + + R+K A
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGG----ELFDKVV---GNKRLKEATC 122
Query: 207 ----LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTH 259
+ +LH +I+RD K N+LL S+ K++DFG +K G+ +
Sbjct: 123 KLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSL 178
Query: 260 VSTRVVGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEILTG---------RRSMDKK 307
+ T + GT Y APE ++ T D +S GV+L L+G + S+ +
Sbjct: 179 MRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 237
Query: 308 RPSGEQNLV--AWAR--QYLADKRKLYQIVDPR 336
SG+ N + WA + D K +VDP+
Sbjct: 238 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 270
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 23/218 (10%)
Query: 90 SATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG--HREWV 147
S T ++ LG+G F V + K +G A K + L H++
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRC---------MKIPTGQEYAAKIINTKKLSARDHQKLE 51
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI--PLPWSNRIKI 205
E L HPN+V+L E+ LV++ +T G L + R S+ I+
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQ 111
Query: 206 ALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTHVST 262
L + H +++RD K N+LL S+ KL+DFGLA QGD+
Sbjct: 112 ILESVN-----HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWF 164
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GT GY +PE + D+++ GV+L +L G
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 38/213 (17%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA-- 206
E++ L +L+HP ++K+ + +D +V E M G LF + + + R+K A
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGG----ELFDKVV---GNKRLKEATC 115
Query: 207 ----LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTH 259
+ +LH +I+RD K N+LL S+ K++DFG +K + T
Sbjct: 116 KLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TS 170
Query: 260 VSTRVVGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEILTG---------RRSMDKK 307
+ + GT Y APE ++ T D +S GV+L L+G + S+ +
Sbjct: 171 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 230
Query: 308 RPSGEQNLV--AWAR--QYLADKRKLYQIVDPR 336
SG+ N + WA + D K +VDP+
Sbjct: 231 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 263
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 38/213 (17%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA-- 206
E++ L +L+HP ++K+ + +D +V E M G LF + + + R+K A
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGG----ELFDKVV---GNKRLKEATC 116
Query: 207 ----LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTH 259
+ +LH +I+RD K N+LL S+ K++DFG +K + T
Sbjct: 117 KLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TS 171
Query: 260 VSTRVVGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEILTG---------RRSMDKK 307
+ + GT Y APE ++ T D +S GV+L L+G + S+ +
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 231
Query: 308 RPSGEQNLV--AWAR--QYLADKRKLYQIVDPR 336
SG+ N + WA + D K +VDP+
Sbjct: 232 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 264
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 38/213 (17%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA-- 206
E++ L +L+HP ++K+ + +D +V E M G LF + + + R+K A
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGG----ELFDKVV---GNKRLKEATC 116
Query: 207 ----LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTH 259
+ +LH +I+RD K N+LL S+ K++DFG +K + T
Sbjct: 117 KLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TS 171
Query: 260 VSTRVVGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEILTG---------RRSMDKK 307
+ + GT Y APE ++ T D +S GV+L L+G + S+ +
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 231
Query: 308 RPSGEQNLV--AWAR--QYLADKRKLYQIVDPR 336
SG+ N + WA + D K +VDP+
Sbjct: 232 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 264
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 38/213 (17%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA-- 206
E++ L +L+HP ++K+ + +D +V E M G LF + + + R+K A
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGG----ELFDKVVG---NKRLKEATC 116
Query: 207 ----LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTH 259
+ +LH +I+RD K N+LL S+ K++DFG +K + T
Sbjct: 117 KLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TS 171
Query: 260 VSTRVVGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEILTG---------RRSMDKK 307
+ + GT Y APE ++ T D +S GV+L L+G + S+ +
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 231
Query: 308 RPSGEQNLV--AWAR--QYLADKRKLYQIVDPR 336
SG+ N + WA + D K +VDP+
Sbjct: 232 ITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 264
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL Y +D+ L +V E++ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL Y +D+ L +V E++ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL Y +D+ L +V E++ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 116
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ D GLA+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARH 174
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 175 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 92/218 (42%), Gaps = 23/218 (10%)
Query: 90 SATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG--HREWV 147
S T ++ LG+G F V + K +G A K + L H++
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRC---------MKIPTGQEYAAKIINTKKLSARDHQKLE 51
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI--PLPWSNRIKI 205
E L HPN+V+L E+ LV++ +T G L + R S+ I+
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQ 111
Query: 206 ALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTHVST 262
L + H +++RD K N+LL S+ KL+DFGLA QGD+
Sbjct: 112 ILESVN-----HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWF 164
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
GT GY +PE + D+++ GV+L +L G
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + K++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 116
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H +I+RD K SN+ ++ + K+ D GLA+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARH 174
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 175 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 38/214 (17%)
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA- 206
E++ L +L+HP ++K+ + +D +V E M G LF + + + R+K A
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGG----ELFDKVVG---NKRLKEAT 240
Query: 207 -----LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKT 258
+ +LH +I+RD K N+LL S+ K++DFG +K + T
Sbjct: 241 CKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 295
Query: 259 HVSTRVVGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEILTG---------RRSMDK 306
+ + GT Y APE ++ T D +S GV+L L+G + S+
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 355
Query: 307 KRPSGEQNLV--AWAR--QYLADKRKLYQIVDPR 336
+ SG+ N + WA + D K +VDP+
Sbjct: 356 QITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 389
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 99/265 (37%), Gaps = 70/265 (26%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQG-HREWVAEVDFLGQL-HH 158
LG G FG V IE + K + TVAVK LK HR ++E+ L + HH
Sbjct: 28 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 83
Query: 159 PNLVKLIGYCIEDDQRLLVY-EFMTRGSLENHL----------------FRR------TI 195
N+V L+G C + L+V EF G+L +L FR+ I
Sbjct: 84 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 143
Query: 196 PLPWSNRI----------KIALGAAKGLAFLHGGSEPV-IYRDFKT-------------- 230
P+ R+ K L+ + P +Y+DF T
Sbjct: 144 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 203
Query: 231 ----------------SNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
NILL + K+ DFGLA+ + + APE
Sbjct: 204 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 263
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILT 299
+ T +SDV+SFGV+L EI +
Sbjct: 264 TIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE ++ D++S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E+ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+++D + K++DFGLAK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y APE +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLAGTPEYLAPEII 210
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 38/214 (17%)
Query: 148 AEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA- 206
E++ L +L+HP ++K+ + +D +V E M G LF + + + R+K A
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGG----ELFDKVVG---NKRLKEAT 254
Query: 207 -----LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKT 258
+ +LH +I+RD K N+LL S+ K++DFG +K + T
Sbjct: 255 CKLYFYQMLLAVQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 309
Query: 259 HVSTRVVGTYGYAAPEYVM---TGHLTSKSDVYSFGVVLLEILTG---------RRSMDK 306
+ + GT Y APE ++ T D +S GV+L L+G + S+
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 369
Query: 307 KRPSGEQNLV--AWAR--QYLADKRKLYQIVDPR 336
+ SG+ N + WA + D K +VDP+
Sbjct: 370 QITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPK 403
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 42/240 (17%)
Query: 94 NFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKP--DGLQGHREWVAEVD 151
N+ ++G G +GYV+ + ++N VA+K + + L + + E+
Sbjct: 29 NYEIKHLIGRGSYGYVYLAY-DKNANK--------NVAIKKVNRMFEDLIDCKRILREIT 79
Query: 152 FLGQLHHPNLVKLIGYCIEDD----QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIAL 207
L +L +++L I +D L + + L+ LF+ I L + I
Sbjct: 80 ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKK-LFKTPIFLTEQHVKTILY 138
Query: 208 GAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVS------ 261
G F+H +I+RD K +N LL+ + + K+ DFGLA+ H+
Sbjct: 139 NLLLGEKFIHESG--IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEK 196
Query: 262 -----------------TRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGRRS 303
T V T Y APE ++ + T+ D++S G + E+L +S
Sbjct: 197 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG+G F V + G + + K + H++ E L HPN
Sbjct: 19 LGKGAFSVVRR-------CVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPN 71
Query: 161 LVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL-AFLHGG 219
+V+L E+ L+++ +T G LF + + + + + L A LH
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGE----LFEDIVAREYYSEADASHCIQQILEAVLHCH 127
Query: 220 SEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYV 276
V++R+ K N+LL S+ KL+DFGLA +G++ GT GY +PE +
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQ-QAWFGFAGTPGYLSPEVL 185
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
D+++ GV+L +L G
Sbjct: 186 RKDPYGKPVDLWACGVILYILLVG 209
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE ++ D++S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y APE +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFAEPHARFYAAQIVLTFEYLH-- 158
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y APE +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 79 QLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP 137
Q L T E+ N P +G G +G V A +G+ VAVK L +P
Sbjct: 11 QELNKTIWEVPERYQNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRP 58
Query: 138 -DGLQGHREWVAEVDFLGQLHHPNLVKLI-----GYCIEDDQRLLVYEFMTRGSLENHLF 191
+ + E+ L + H N++ L+ +E+ + + + L N
Sbjct: 59 FQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--I 116
Query: 192 RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+ L + + +GL ++H S +I+RD K SN+ ++ + K+ D GLA+
Sbjct: 117 VKCQKLTDDHVQFLIYQILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDGGLARH 174
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
+V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 175 TDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 103
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLH-- 159
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y APE +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 211
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y APE +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+GL ++H +I+RD K SN+ ++ + K+ DF LA+ +V+TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WY 188
Query: 271 AAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y APE +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLH-- 158
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y APE +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 129/311 (41%), Gaps = 60/311 (19%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-----WVAEVDFLGQ 155
+G+G FG VFK + G A LK ++ +E + E+ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVA------------LKKVLMENEKEGFPITALREIKILQL 73
Query: 156 LHHPNLVKLIGYCIED--------DQRLLVYEFMTR---GSLENHLFRRTIPLPWSNRIK 204
L H N+V LI C LV++F G L N L + T+ S +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL----SEIKR 129
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA---GPQGDKTHVS 261
+ GL ++H +++RD K +N+L+ + KL+DFGLA+A
Sbjct: 130 VMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 262 TRVVGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 320
RVV T Y PE ++ D++ G ++ E+ T M + + EQ+ +A
Sbjct: 188 NRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM---QGNTEQHQLALIS 243
Query: 321 QYL----------ADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
Q D +LY+ +LEL +KG ++ + RDP + +D++
Sbjct: 244 QLCGSITPEVWPNVDNYELYE----KLEL---VKGQKRKVKDRLKAYVRDPYALDLIDKL 296
Query: 371 VKVLTPLQDLN 381
+ VL P Q ++
Sbjct: 297 L-VLDPAQRID 306
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLH-- 158
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y APE +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 22/224 (9%)
Query: 85 FQELKSAT---GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQ 141
FQ + + T +++ LG+G F V + P + + K +
Sbjct: 20 FQXMATCTRFTDDYQLFEELGKGAFSVVRR-------CVKKTPTQEYAAKIINTKKLSAR 72
Query: 142 GHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTI--PLPW 199
H++ E L HPN+V+L E+ LV++ +T G L + R
Sbjct: 73 DHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA 132
Query: 200 SNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGD 256
S+ I L + H +++RD K N+LL S+ KL+DFGLA QG+
Sbjct: 133 SHCIHQILESVN-----HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGE 186
Query: 257 KTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
+ GT GY +PE + D+++ GV+L +L G
Sbjct: 187 Q-QAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 114/274 (41%), Gaps = 37/274 (13%)
Query: 31 IPRTSLVYDAATETRYLNASNRELCAPNEAHLSSDNPDPAPTDEKSPCQLLQFTFQELKS 90
+PR S + +AA + S +E A D T ++ QL QF +K+
Sbjct: 15 VPRGSHMGNAAAAKK---GSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQF--DRIKT 69
Query: 91 ATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEV 150
LG G FG V +E+G A VK + + + + V
Sbjct: 70 ----------LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV 119
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGA 209
+F P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 120 NF------PFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAAQI 171
Query: 210 AKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVG 266
+LH S +IYRD K N+L+D + +++DFG AK V R + G
Sbjct: 172 VLTFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 221
Query: 267 TYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
T Y APE +++ D ++ GV++ E+ G
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 24/210 (11%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
+LG+G +G V+ G N + +A+K + + + E+ L H
Sbjct: 15 VLGKGTYGIVYAGRDLSNQ---------VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 65
Query: 160 NLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK---GLAFL 216
N+V+ +G E+ + E + GSL L + PL N I + GL +L
Sbjct: 66 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLK-DNEQTIGFYTKQILEGLKYL 124
Query: 217 HGGSEPVIYRDFKTSNILLDSEYNA-KLSDFGLAK--AGPQGDKTHVSTRVVGTYGYAAP 273
H +++RD K N+L+++ K+SDFG +K AG + GT Y AP
Sbjct: 125 HDNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG----INPCTETFTGTLQYMAP 178
Query: 274 EYVMTG--HLTSKSDVYSFGVVLLEILTGR 301
E + G +D++S G ++E+ TG+
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y APE +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLXGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLH-- 158
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y APE +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 97
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 98 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLH-- 153
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y APE +
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 205
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 206 LSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 89
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 90 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLH-- 145
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y APE +
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 197
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 198 LSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQG------DKTHVS--- 261
+ L+++H S+ +I+R+ K NI +D N K+ DFGLAK + D ++
Sbjct: 127 EALSYIH--SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 262 ---TRVVGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEIL 298
T +GT Y A E + TGH K D YS G++ E +
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 134/314 (42%), Gaps = 50/314 (15%)
Query: 101 LGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQ--LH 157
+G+G +G V+ G W G VAVK W E + +
Sbjct: 45 IGKGRYGEVWMGKW------------RGEKVAVKVF---FTTEEASWFRETEIYQTVLMR 89
Query: 158 HPNLVKLIGYCIEDD----QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
H N++ I I+ Q L+ ++ GSL ++L ++ L + +K+A + GL
Sbjct: 90 HENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGL 147
Query: 214 AFLHG------GSEPVIYRDFKTSNILLDSEYNAKLSDFGLA-KAGPQGDKTHV--STRV 264
LH G + +RD K+ NIL+ ++D GLA K ++ + +TR
Sbjct: 148 CHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR- 206
Query: 265 VGTYGYAAPEY----VMTGHLTS--KSDVYSFGVVLLEILTGRRSMDKKRPSGEQ----N 314
VGT Y PE + H S +D+YSFG++L E+ RR + Q +
Sbjct: 207 VGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEEYQLPYHD 264
Query: 315 LVAWARQYLADKRKLYQI--VDPRLELNYSL-KGVQKVSQLAYNCLSRDPKSRPSMDEVV 371
LV Y D R++ I + P +S + ++++ +L C + +P SR + V
Sbjct: 265 LVPSDPSY-EDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVK 323
Query: 372 KVLTPLQDLNDLAI 385
K L + + D+ +
Sbjct: 324 KTLAKMSESQDIKL 337
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 96 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 153
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
+LH S +IYRD K N+L+D + +++DFG AK T + GT Y
Sbjct: 154 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LCGTPEYL 206
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE +++ D ++ GV++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 22/210 (10%)
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLG 154
F LG G FG V +E G A VK + + + + V+F
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-- 101
Query: 155 QLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 102 ----PFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTF 155
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGY 270
+LH S +IYRD K N+L+D + +++DFG AK V R + GT Y
Sbjct: 156 EYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 205
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE +++ D ++ GV++ E+ G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 96 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 153
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 154 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 203
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 96 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 153
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 154 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 203
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
Query: 127 GITVAVKSL-KPDGLQGH-REWVAEVDFLGQLHHPNLVKLIGY-----CIEDDQRL-LVY 178
GI VAVK L +P Q H + E+ L ++H N++ L+ +E+ Q + LV
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 179 EFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSE 238
E M N + L + G+ LH +I+RD K SNI++ S+
Sbjct: 109 ELMD----ANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD 162
Query: 239 YNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEIL 298
K+ DFGLA+ + T V T Y APE ++ + D++S G ++ E++
Sbjct: 163 CTLKILDFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELV 219
Query: 299 TG 300
G
Sbjct: 220 KG 221
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E G A VK + + + + V+F P
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 95
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 96 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLH-- 151
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y APE +
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 203
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 204 LSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 16/149 (10%)
Query: 156 LHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ P LVKL + +D+ L +V E+ G + +HL RR + A
Sbjct: 99 VNFPFLVKL-EFSFKDNSNLYMVLEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFE 156
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYA 271
+LH S +IYRD K N+L+D + K++DFG AK V R + GT Y
Sbjct: 157 YLH--SLDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE +++ D ++ GV++ E+ G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 129/311 (41%), Gaps = 60/311 (19%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-----WVAEVDFLGQ 155
+G+G FG VFK + G A LK ++ +E + E+ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVA------------LKKVLMENEKEGFPITALREIKILQL 73
Query: 156 LHHPNLVKLIGYCIEDDQ--------RLLVYEFMTR---GSLENHLFRRTIPLPWSNRIK 204
L H N+V LI C LV++F G L N L + T+ S +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTL----SEIKR 129
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA---GPQGDKTHVS 261
+ GL ++H +++RD K +N+L+ + KL+DFGLA+A
Sbjct: 130 VMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 262 TRVVGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 320
RVV T Y PE ++ D++ G ++ E+ T M + + EQ+ +A
Sbjct: 188 NRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM---QGNTEQHQLALIS 243
Query: 321 QYL----------ADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
Q D +LY+ +LEL +KG ++ + RDP + +D++
Sbjct: 244 QLCGSITPEVWPNVDNYELYE----KLEL---VKGQKRKVKDRLKAYVRDPYALDLIDKL 296
Query: 371 VKVLTPLQDLN 381
+ VL P Q ++
Sbjct: 297 L-VLDPAQRID 306
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 96 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 153
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 154 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 203
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 116 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 173
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 174 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 223
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 129/311 (41%), Gaps = 60/311 (19%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-----WVAEVDFLGQ 155
+G+G FG VFK + G A LK ++ +E + E+ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVA------------LKKVLMENEKEGFPITALREIKILQL 73
Query: 156 LHHPNLVKLIGYCIED--------DQRLLVYEFMTR---GSLENHLFRRTIPLPWSNRIK 204
L H N+V LI C LV++F G L N L + T+ S +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL----SEIKR 129
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA---GPQGDKTHVS 261
+ GL ++H +++RD K +N+L+ + KL+DFGLA+A
Sbjct: 130 VMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 187
Query: 262 TRVVGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 320
RVV T Y PE ++ D++ G ++ E+ T M + + EQ+ +A
Sbjct: 188 NRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM---QGNTEQHQLALIS 243
Query: 321 QYL----------ADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
Q D +LY+ +LEL +KG ++ + RDP + +D++
Sbjct: 244 QLCGSITPEVWPNVDNYELYE----KLEL---VKGQKRKVKDRLKAYVRDPYALDLIDKL 296
Query: 371 VKVLTPLQDLN 381
+ VL P Q ++
Sbjct: 297 L-VLDPAQRID 306
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E G A VK + + + + V+F P
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 95
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 96 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLH-- 151
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y APE +
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 203
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 204 LSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 129/311 (41%), Gaps = 60/311 (19%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHRE-----WVAEVDFLGQ 155
+G+G FG VFK + G A LK ++ +E + E+ L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVA------------LKKVLMENEKEGFPITALREIKILQL 72
Query: 156 LHHPNLVKLIGYCIED--------DQRLLVYEFMTR---GSLENHLFRRTIPLPWSNRIK 204
L H N+V LI C LV++F G L N L + T+ S +
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL----SEIKR 128
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA---GPQGDKTHVS 261
+ GL ++H +++RD K +N+L+ + KL+DFGLA+A
Sbjct: 129 VMQMLLNGLYYIHRNK--ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYX 186
Query: 262 TRVVGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWAR 320
RVV T Y PE ++ D++ G ++ E+ T M + + EQ+ +A
Sbjct: 187 NRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM---QGNTEQHQLALIS 242
Query: 321 QYL----------ADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
Q D +LY+ +LEL +KG ++ + RDP + +D++
Sbjct: 243 QLCGSITPEVWPNVDNYELYE----KLEL---VKGQKRKVKDRLKAYVRDPYALDLIDKL 295
Query: 371 VKVLTPLQDLN 381
+ VL P Q ++
Sbjct: 296 L-VLDPAQRID 305
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E+ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+++D + K++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E+ G + +HL RR + A
Sbjct: 96 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 153
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+++D + K++DFG AK V R + GT
Sbjct: 154 TFEYLH--SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTP 203
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 81 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 138
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
+LH S +IYRD K N+L+D + +++DFG AK T + GT Y
Sbjct: 139 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LCGTPEYL 191
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE +++ D ++ GV++ E+ G
Sbjct: 192 APEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+++D + +++DFG AK V R + GT Y APE +
Sbjct: 159 SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 211 ISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 96 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAAQIVL 153
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 154 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 203
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E+ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+++D + +++DFGLAK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E+ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFXEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+++D + K++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 39/231 (16%)
Query: 84 TFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSL-KP--DGL 140
T E+++ + +P +G G +G V + +G VA+K L +P L
Sbjct: 19 TAWEVRAVYRDLQP---VGSGAYGAV---------CSAVDGRTGAKVAIKKLYRPFQSEL 66
Query: 141 QGHREWVAEVDFLGQLHHPNLVKLIGYCIEDD------QRLLVYEFM--TRGSLENHLFR 192
R + E+ L + H N++ L+ D+ LV FM G L H
Sbjct: 67 FAKRAY-RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH--- 122
Query: 193 RTIPLPWSNRIK-IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA 251
+RI+ + KGL ++H +I+RD K N+ ++ + K+ DFGLA+
Sbjct: 123 ---EKLGEDRIQFLVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLARQ 177
Query: 252 GPQGDKTHVSTRVVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILTGR 301
V TR Y APE ++ T D++S G ++ E++TG+
Sbjct: 178 ADSEMXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E++ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+L+D + +++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y APE +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEII 210
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ ++ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 17/182 (9%)
Query: 127 GITVAVKSL-KPDGLQGH-REWVAEVDFLGQLHHPNLVKLIGY-----CIEDDQRL-LVY 178
GI VAVK L +P Q H + E+ L ++H N++ L+ +E+ Q + LV
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 179 EFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSE 238
E M N + L + G+ LH +I+RD K SNI++ S+
Sbjct: 107 ELMD----ANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSD 160
Query: 239 YNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEIL 298
K+ DFGLA+ + T V T Y APE ++ D++S G ++ E++
Sbjct: 161 CTLKILDFGLART---ASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELV 217
Query: 299 TG 300
G
Sbjct: 218 KG 219
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V EV L
Sbjct: 20 LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
Q+ HPN++ L +L+ E ++ G L + L ++ L G+
Sbjct: 71 QVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVN 129
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH ++ + + D K NI LLD + KL DFGLA G + + GT +
Sbjct: 130 YLH--TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEF 184
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 19 LGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S + + D K NI LLD K+ DFGLA G++ + GT +
Sbjct: 129 YLH--SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPAF 183
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 193
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE ++ D++S G ++ E++ G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 19/206 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
++ +G G +G V + G+ I A K + ++ + E++ + L
Sbjct: 14 ENTIGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
HPN+++L ++ LV E T G L + + + S+ +I +A+ H
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCH 123
Query: 218 GGSEPVIYRDFKTSNILL--DS-EYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
+ V +RD K N L DS + KL DFGLA G VGT Y +P+
Sbjct: 124 KLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQ 178
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTG 300
V+ G + D +S GV++ +L G
Sbjct: 179 -VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 19/160 (11%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNR-----I 203
E+ L +L HPN++KL + LV E +T G L + + + +S R +
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY---YSERDAADAV 154
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDS---EYNAKLSDFGLAKAGPQGDKTHV 260
K L A +A+LH +++RD K N+L + + K++DFGL+K + +
Sbjct: 155 KQILEA---VAYLHENG--IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVL 206
Query: 261 STRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
V GT GY APE + + D++S G++ +L G
Sbjct: 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 19/206 (9%)
Query: 98 DSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
++ +G G +G V + G+ I A K + ++ + E++ + L
Sbjct: 31 ENTIGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 81
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
HPN+++L ++ LV E T G L + + + S+ +I +A+ H
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCH 140
Query: 218 GGSEPVIYRDFKTSNILL--DS-EYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
+ V +RD K N L DS + KL DFGLA G VGT Y +P+
Sbjct: 141 KLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQ 195
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTG 300
V+ G + D +S GV++ +L G
Sbjct: 196 -VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 152 FLGQLHHPNLVKLIGYCIEDDQR-----LLVYEFMTRGSLENHLFRRTIPLPWSNRIKIA 206
FL ++ HP++V++ + D+ +V E++ SL+ ++ LP + I
Sbjct: 132 FLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK---LPVAEAIAYL 188
Query: 207 LGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVG 266
L L++LH S ++Y D K NI+L +E KL D G + + + G
Sbjct: 189 LEILPALSYLH--SIGLVYNDLKPENIML-TEEQLKLIDLGAVS------RINSFGYLYG 239
Query: 267 TYGYAAPEYVMTGHLTSKSDVYSFGVVL 294
T G+ APE V TG T +D+Y+ G L
Sbjct: 240 TPGFQAPEIVRTGP-TVATDIYTVGRTL 266
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE ++ D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 93/216 (43%), Gaps = 28/216 (12%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH-H 158
+LGEG + V +NG AVK ++ EV+ L Q +
Sbjct: 20 LLGEGAYAKVQGAVSLQNGK---------EYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 159 PNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
N+++LI + EDD R LV+E + GS+ H+ ++ ++ A L FLH
Sbjct: 71 KNILELIEF-FEDDTRFYLVFEKLQGGSILAHI-QKQKHFNEREASRVVRDVAAALDFLH 128
Query: 218 GGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDK-----THVSTRVVGTYG 269
++ + +RD K NIL +S K+ DF L + T T G+
Sbjct: 129 --TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 270 YAAPEY--VMTGHLT---SKSDVYSFGVVLLEILTG 300
Y APE V T T + D++S GVVL +L+G
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G + VV Y Y
Sbjct: 140 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRY-YR 194
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE ++ D++S G ++ E++ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 19 LGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S + + D K NI LLD K+ DFGLA G++ + GT +
Sbjct: 129 YLH--SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 119/293 (40%), Gaps = 48/293 (16%)
Query: 94 NFRPDSILGEGGFG-YVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
+F P +LG G G V++G + VAVK + P+ EV
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRD-----------VAVKRILPECFSFADR---EVQL 70
Query: 153 LGQL-HHPNLVKLIGYCIEDDQRLLVYEF-MTRGSLENHLFRRTIPLPWSNRIKIALGAA 210
L + HPN+++ +C E D++ + +L+ ++ ++ I +
Sbjct: 71 LRESDEHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTT 128
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLD-----SEYNAKLSDFGLAKAGPQGDKTHVSTR-- 263
GLA LH S +++RD K NIL+ + A +SDFGL K G H +R
Sbjct: 129 SGLAHLH--SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG--RHSFSRRS 184
Query: 264 -VVGTYGYAAPEYV---MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWA 319
V GT G+ APE + + T D++S G V +++ K + N++ A
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGA 244
Query: 320 RQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
+ ++ V R +L ++ DP+ RPS V+K
Sbjct: 245 CSLDCLHPEKHEDVIAR--------------ELIEKMIAMDPQKRPSAKHVLK 283
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P LVKL + +D+ L +V E+ G + +HL RR + A
Sbjct: 95 LQAVNFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 152
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+++D + +++DFG AK V R + GT
Sbjct: 153 TFEYLH--SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTP 202
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT Y AP +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPAII 210
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 81/187 (43%), Gaps = 33/187 (17%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 131 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 185
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLE------ILTGRRSMDKKRPSGEQ----------NL 315
APE ++ D++S G ++ E + GR +D+ EQ L
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245
Query: 316 VAWARQYLADKRKLYQIVDPRL----------ELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
R Y+ ++ K + P+L E N LK Q L+ L DP R
Sbjct: 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN-KLKASQARDLLS-KMLVIDPAKRI 303
Query: 366 SMDEVVK 372
S+D+ ++
Sbjct: 304 SVDDALQ 310
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P L KL + +D+ L +V E+ G + +HL RR + A
Sbjct: 96 LQAVNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 153
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+++D + K++DFG AK V R + GT
Sbjct: 154 TFEYLH--SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTP 203
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P L KL + +D+ L +V E+ G + +HL RR + A
Sbjct: 96 LQAVNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVL 153
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+++D + K++DFG AK V R + GT
Sbjct: 154 TFEYLH--SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTP 203
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
HPN+VKL + LV E + G L + ++ + I ++ +H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI-KKKKHFSETEASYIMRKLVSAVSHMH 123
Query: 218 GGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
V++RD K N+L E + K+ DFG A+ P D + T T YAAPE
Sbjct: 124 DVG--VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCF-TLHYAAPE 179
Query: 275 YVMTGHLTSKSDVYSFGVVLLEILTGR 301
+ D++S GV+L +L+G+
Sbjct: 180 LLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 33/187 (17%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 176 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 230
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEIL------TGRRSMDKKRPSGEQ----------NL 315
APE ++ D++S G ++ E++ GR +D+ EQ L
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290
Query: 316 VAWARQYLADKRKLYQIVDPRL----------ELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
R Y+ ++ K + P+L E N LK Q L+ L DP R
Sbjct: 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN-KLKASQARDLLS-KMLVIDPAKRI 348
Query: 366 SMDEVVK 372
S+D+ ++
Sbjct: 349 SVDDALQ 355
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G + VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILT------GRRSMDKKRPSGEQ 313
APE ++ D++S G ++ E++ GR +D+ EQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 153 LGQLHHPNLVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK 211
L ++ P L KL + +D+ L +V E+ G + +HL RR + A
Sbjct: 96 LQAVNFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFXEPHARFYAAQIVL 153
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTY 268
+LH S +IYRD K N+++D + K++DFG AK V R + GT
Sbjct: 154 TFEYLH--SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTP 203
Query: 269 GYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
Y APE +++ D ++ GV++ E+ G
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 81/187 (43%), Gaps = 33/187 (17%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 186
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLE------ILTGRRSMDKKRPSGEQ----------NL 315
APE ++ D++S G ++ E + GR +D+ EQ L
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 246
Query: 316 VAWARQYLADKRKLYQIVDPRL----------ELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
R Y+ ++ K + P+L E N LK Q L+ L DP R
Sbjct: 247 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN-KLKASQARDLLS-KMLVIDPAKRI 304
Query: 366 SMDEVVK 372
S+D+ ++
Sbjct: 305 SVDDALQ 311
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 33/187 (17%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 176 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 230
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEIL------TGRRSMDKKRPSGEQ----------NL 315
APE ++ D++S G ++ E++ GR +D+ EQ L
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290
Query: 316 VAWARQYLADKRKLYQIVDPRL----------ELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
R Y+ ++ K + P+L E N LK Q L+ L DP R
Sbjct: 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN-KLKASQARDLLS-KMLVIDPAKRI 348
Query: 366 SMDEVVK 372
S+D+ ++
Sbjct: 349 SVDDALQ 355
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 81/187 (43%), Gaps = 33/187 (17%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 131 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 185
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLE------ILTGRRSMDKKRPSGEQ----------NL 315
APE ++ D++S G ++ E + GR +D+ EQ L
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245
Query: 316 VAWARQYLADKRKLYQIVDPRL----------ELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
R Y+ ++ K + P+L E N LK Q L+ L DP R
Sbjct: 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN-KLKASQARDLLS-KMLVIDPAKRI 303
Query: 366 SMDEVVK 372
S+D+ ++
Sbjct: 304 SVDDALQ 310
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 81/187 (43%), Gaps = 33/187 (17%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLE------ILTGRRSMDKKRPSGEQ----------NL 315
APE ++ D++S G ++ E + GR +D+ EQ L
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 316 VAWARQYLADKRKLYQIVDPRL----------ELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
R Y+ ++ K + P+L E N LK Q L+ L DP R
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN-KLKASQARDLLS-KMLVIDPAKRI 310
Query: 366 SMDEVVK 372
S+D+ ++
Sbjct: 311 SVDDALQ 317
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 81/187 (43%), Gaps = 33/187 (17%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 186
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLE------ILTGRRSMDKKRPSGEQ----------NL 315
APE ++ D++S G ++ E + GR +D+ EQ L
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 246
Query: 316 VAWARQYLADKRKLYQIVDPRL----------ELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
R Y+ ++ K + P+L E N LK Q L+ L DP R
Sbjct: 247 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN-KLKASQARDLLS-KMLVIDPAKRI 304
Query: 366 SMDEVVK 372
S+D+ ++
Sbjct: 305 SVDDALQ 311
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 81/187 (43%), Gaps = 33/187 (17%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 193
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLE------ILTGRRSMDKKRPSGEQ----------NL 315
APE ++ D++S G ++ E + GR +D+ EQ L
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 253
Query: 316 VAWARQYLADKRKLYQIVDPRL----------ELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
R Y+ ++ K + P+L E N LK Q L+ L DP R
Sbjct: 254 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN-KLKASQARDLLS-KMLVIDPAKRI 311
Query: 366 SMDEVVK 372
S+D+ ++
Sbjct: 312 SVDDALQ 318
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 81/187 (43%), Gaps = 33/187 (17%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 193
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLE------ILTGRRSMDKKRPSGEQ----------NL 315
APE ++ D++S G ++ E + GR +D+ EQ L
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 253
Query: 316 VAWARQYLADKRKLYQIVDPRL----------ELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
R Y+ ++ K + P+L E N LK Q L+ L DP R
Sbjct: 254 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN-KLKASQARDLLS-KMLVIDPAKRI 311
Query: 366 SMDEVVK 372
S+D+ ++
Sbjct: 312 SVDDALQ 318
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 81/187 (43%), Gaps = 33/187 (17%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLE------ILTGRRSMDKKRPSGEQ----------NL 315
APE ++ D++S G ++ E + GR +D+ EQ L
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 316 VAWARQYLADKRKLYQIVDPRL----------ELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
R Y+ ++ K + P+L E N LK Q L+ L DP R
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN-KLKASQARDLLS-KMLVIDPAKRI 310
Query: 366 SMDEVVK 372
S+D+ ++
Sbjct: 311 SVDDALQ 317
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 33/187 (17%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 137 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 191
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEIL------TGRRSMDKKRPSGEQ----------NL 315
APE ++ D++S G ++ E++ GR +D+ EQ L
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 251
Query: 316 VAWARQYLADKRKLYQIVDPRL----------ELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
R Y+ ++ K + P+L E N LK Q L+ L DP R
Sbjct: 252 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN-KLKASQARDLLS-KMLVIDPAKRI 309
Query: 366 SMDEVVK 372
S+D+ ++
Sbjct: 310 SVDDALQ 316
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 33/187 (17%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEIL------TGRRSMDKKRPSGEQ----------NL 315
APE ++ D++S G ++ E++ GR +D+ EQ L
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 316 VAWARQYLADKRKLYQIVDPRL----------ELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
R Y+ ++ K + P+L E N LK Q L+ L DP R
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN-KLKASQARDLLS-KMLVIDPAKRI 310
Query: 366 SMDEVVK 372
S+D+ ++
Sbjct: 311 SVDDALQ 317
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 81/187 (43%), Gaps = 33/187 (17%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLE------ILTGRRSMDKKRPSGEQ----------NL 315
APE ++ D++S G ++ E + GR +D+ EQ L
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 316 VAWARQYLADKRKLYQIVDPRL----------ELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
R Y+ ++ K + P+L E N LK Q L+ L DP R
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN-KLKASQARDLLS-KMLVIDPAKRI 310
Query: 366 SMDEVVK 372
S+D+ ++
Sbjct: 311 SVDDALQ 317
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 33/187 (17%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILT------GRRSMDKKRPSGEQ----------NL 315
APE ++ D++S G ++ E++ GR +D+ EQ L
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 316 VAWARQYLADKRKLYQIVDPRL----------ELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
R Y+ ++ K + P+L E N LK Q L+ L DP R
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN-KLKASQARDLLS-KMLVIDPAKRI 310
Query: 366 SMDEVVK 372
S+D+ ++
Sbjct: 311 SVDDALQ 317
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 33/187 (17%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILT------GRRSMDKKRPSGEQ----------NL 315
APE ++ D++S G ++ E++ GR +D+ EQ L
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 316 VAWARQYLADKRKLYQIVDPRL----------ELNYSLKGVQKVSQLAYNCLSRDPKSRP 365
R Y+ ++ K + P+L E N LK Q L+ L DP R
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHN-KLKASQARDLLS-KMLVIDPAKRI 310
Query: 366 SMDEVVK 372
S+D+ ++
Sbjct: 311 SVDDALQ 317
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 19 LGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S + + D K NI LLD K+ DFGLA G++ + GT +
Sbjct: 129 YLH--SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 22/204 (10%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPN 160
LG G FG V +E+G A VK + + + + V+F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF------PF 102
Query: 161 LVKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGG 219
LVKL + +D+ L +V E++ G + +HL RR + A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 220 SEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR---VVGTYGYAAPEYV 276
S +IYRD K N+L+D + +++DFG AK V R + GT APE +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEALAPEII 210
Query: 277 MTGHLTSKSDVYSFGVVLLEILTG 300
++ D ++ GV++ E+ G
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 19 LGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S + + D K NI LLD K+ DFGLA G++ + GT +
Sbjct: 129 YLH--SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 19 LGSGKFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S + + D K NI LLD K+ DFGLA G++ + GT +
Sbjct: 129 YLH--SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 183
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 19 LGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S + + D K NI LLD K+ DFGLA G++ + GT +
Sbjct: 129 YLH--SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 183
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 18 LGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 127
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S + + D K NI LLD K+ DFGLA G++ + GT +
Sbjct: 128 YLH--SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 182
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 18 LGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 127
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S + + D K NI LLD K+ DFGLA G++ + GT +
Sbjct: 128 YLH--SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 182
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 107/267 (40%), Gaps = 38/267 (14%)
Query: 39 DAATETRYLNASN----RELCAPNEAHLSSDNPDPAPTDEKSPCQLLQFTFQELKSATGN 94
D TE Y + + R + EA + +P D P Q +FQ L
Sbjct: 12 DLGTENLYFQSMHQLQPRRVSFRGEASETLQSPG---YDPSRPESFFQQSFQRL------ 62
Query: 95 FRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKP-DGLQGHREWVAEV--- 150
S LG G +G VFK +E+G + +S+ P G + +AEV
Sbjct: 63 ----SRLGHGSYGEVFKVRSKEDGR--------LYAVKRSMSPFRGPKDRARKLAEVGSH 110
Query: 151 DFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAA 210
+ +GQ HP V+L E+ L + + SL+ H LP +
Sbjct: 111 EKVGQ--HPCCVRL-EQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTL 167
Query: 211 KGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
LA LH S+ +++ D K +NI L KL DFGL V G Y
Sbjct: 168 LALAHLH--SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPRY 222
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEI 297
APE ++ G + +DV+S G+ +LE+
Sbjct: 223 MAPE-LLQGSYGTAADVFSLGLTILEV 248
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 16/185 (8%)
Query: 126 SGITVAVKSLKPDGLQGHREWVA------EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYE 179
+G+ A K +K + R V+ EV L ++ HPN++ L +L+ E
Sbjct: 35 TGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94
Query: 180 FMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNI-LLDSE 238
+ G L + L + L + G+ +LH S + + D K NI LLD
Sbjct: 95 LVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH--SLQIAHFDLKPENIMLLDRN 151
Query: 239 Y---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLL 295
K+ DFGLA G++ + GT + APE V L ++D++S GV+
Sbjct: 152 VPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 296 EILTG 300
+L+G
Sbjct: 209 ILLSG 213
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 33/176 (18%)
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTR 263
KIA+ K L LH VI+RD K SN+L+++ K DFG++ +
Sbjct: 140 KIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA- 197
Query: 264 VVGTYGYAAPEYV-----MTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAW 318
G Y APE + G+ + KSD++S G+ +E+ R D +W
Sbjct: 198 --GCKPYXAPERINPELNQKGY-SVKSDIWSLGITXIELAILRFPYD-----------SW 243
Query: 319 ARQYLADKRKLYQIVD---PRLELN-YSLKGVQKVSQLAYNCLSRDPKSRPSMDEV 370
+ ++L Q+V+ P+L + +S + V SQ CL ++ K RP+ E+
Sbjct: 244 GTPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQ----CLKKNSKERPTYPEL 291
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 19 LGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S + + D K NI LLD K+ DFGLA G++ + GT +
Sbjct: 129 YLH--SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 33/222 (14%)
Query: 90 SATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLK----PDGLQGHRE 145
++ +R + LGEG +G V+K + TVA+K ++ +G+ G
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKA---------IDTVTNETVAIKRIRLEHEEEGVPGTA- 80
Query: 146 WVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLP-WSNRI- 203
+ EV L +L H N+++L + + L++E+ EN L + P S R+
Sbjct: 81 -IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYA-----ENDLKKYMDKNPDVSMRVI 134
Query: 204 -KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLD----SEYNA-KLSDFGLAKAGPQGDK 257
G+ F H S ++RD K N+LL SE K+ DFGLA+A G
Sbjct: 135 KSFLYQLINGVNFCH--SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIP 190
Query: 258 THVSTRVVGTYGYAAPEYVM-TGHLTSKSDVYSFGVVLLEIL 298
T + T Y PE ++ + H ++ D++S + E+L
Sbjct: 191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G + VV Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-YR 192
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILT------GRRSMDKKRPSGEQ 313
APE ++ D++S G ++ E++ GR +D+ EQ
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 186
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILT------GRRSMDKKRPSGEQ 313
APE ++ D++S G ++ E++ GR +D+ EQ
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 234
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYA 271
G+ LH +I+RD K SNI++ S+ K+ DFGLA+ G ++ VV Y Y
Sbjct: 143 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 197
Query: 272 APEYVMTGHLTSKSDVYSFGVVLLEILT------GRRSMDKKRPSGEQ 313
APE ++ D++S G ++ E++ GR +D+ EQ
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 245
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 16/186 (8%)
Query: 125 GSGITVAVKSLKPDGLQGHREWVA------EVDFLGQLHHPNLVKLIGYCIEDDQRLLVY 178
+G+ A K +K + R V+ EV L ++ HPN++ L +L+
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIL 93
Query: 179 EFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNI-LLDS 237
E + G L + L + L + G+ +LH S + + D K NI LLD
Sbjct: 94 ELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH--SLQIAHFDLKPENIMLLDR 150
Query: 238 EY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVL 294
K+ DFGLA G++ + GT + APE V L ++D++S GV+
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207
Query: 295 LEILTG 300
+L+G
Sbjct: 208 YILLSG 213
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 125/314 (39%), Gaps = 76/314 (24%)
Query: 93 GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA---- 148
+R +LG+GGFG VF G + + VA+K + + + G W
Sbjct: 31 AEYRLGPLLGKGGFGTVFAG---------HRLTDRLQVAIKVIPRNRVLG---WSPLSDS 78
Query: 149 -----EVDFLGQLH----HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPW 199
EV L ++ HP +++L+ + + +LV E R LF
Sbjct: 79 VTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLE---RPLPAQDLFDYI----- 130
Query: 200 SNRIKIALGAAKGL------AFLHGGSEPVIYRDFKTSNILLDSEYN-AKLSDFGLAKAG 252
+ + + G ++ A H S V++RD K NIL+D AKL DFG
Sbjct: 131 TEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG----- 185
Query: 253 PQGDKTHVS--TRVVGTYGYAAPEYVMTGHLTS-KSDVYSFGVVLLEILTGRRSMDKKRP 309
G H T GT Y+ PE++ + + V+S G++L +++ G ++
Sbjct: 186 -SGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER--- 241
Query: 310 SGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDE 369
+Q ++ EL++ L CL+ P SRPS++E
Sbjct: 242 --DQEIL-------------------EAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEE 280
Query: 370 VVK---VLTPLQDL 380
++ + TP +D+
Sbjct: 281 ILLDPWMQTPAEDV 294
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 19 LGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S + + D K NI LLD K+ DFGLA G++ + GT +
Sbjct: 129 YLH--SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 19 LGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S + + D K NI LLD K+ DFGLA G++ + GT +
Sbjct: 129 YLH--SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEF 183
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRI--KI 205
E L HP++V+L+ D +V+EFM L + +R +S +
Sbjct: 78 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 137
Query: 206 ALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA---KLSDFGLAKAGPQGDKTHVST 262
+ L + H + +I+RD K +LL S+ N+ KL FG+A G+ V+
Sbjct: 138 MRQILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAG 193
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT + APE V DV+ GV+L +L+G
Sbjct: 194 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 104/233 (44%), Gaps = 36/233 (15%)
Query: 87 ELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREW 146
+L S + +P LG GG G VF VA+K + Q +
Sbjct: 8 DLGSRYMDLKP---LGCGGNGLVFSA---------VDNDCDKRVAIKKIVLTDPQSVKHA 55
Query: 147 VAEVDFLGQLHHPNLVKL--------------IGYCIEDDQRLLVYEFMTRGSLENHLFR 192
+ E+ + +L H N+VK+ +G E + +V E+M L N L +
Sbjct: 56 LREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQ 114
Query: 193 RTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSE-YNAKLSDFGLAK- 250
PL + +GL ++H + V++RD K +N+ +++E K+ DFGLA+
Sbjct: 115 G--PLLEEHARLFMYQLLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARI 170
Query: 251 AGPQ-GDKTHVSTRVVGTYGYAAPEYVMT-GHLTSKSDVYSFGVVLLEILTGR 301
P K H+S +V T Y +P +++ + T D+++ G + E+LTG+
Sbjct: 171 MDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 23/169 (13%)
Query: 149 EVDFLGQLH-HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIK--- 204
EV+ L Q H N+++LI + E+D+ LV+E M GS+ +H+ +R N ++
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR----HFNELEASV 115
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKA-GPQGDKTHV 260
+ A L FLH ++ + +RD K NIL + K+ DFGL GD + +
Sbjct: 116 VVQDVASALDFLH--NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPI 173
Query: 261 ST----RVVGTYGYAAPEYV-----MTGHLTSKSDVYSFGVVLLEILTG 300
ST G+ Y APE V + D++S GV+L +L+G
Sbjct: 174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 30/173 (17%)
Query: 203 IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEY---NAKLSDFGLAKAGPQGDKTH 259
I++ +G+ +LH + +++ D K NILL S Y + K+ DFG+++ +
Sbjct: 134 IRLIKQILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR 191
Query: 260 VSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWA 319
++GT Y APE + +T+ +D+++ G++ +LT GE
Sbjct: 192 ---EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF-----VGE------- 236
Query: 320 RQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYN----CLSRDPKSRPSMD 368
D ++ Y + ++ ++YS + VSQLA + L ++P+ RP+ +
Sbjct: 237 -----DNQETYLNIS-QVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAE 283
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 144 REWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNR 202
R+ E++ L + HPN++ L + +V E M G L + + R+ +S R
Sbjct: 60 RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF---FSER 116
Query: 203 --IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEY----NAKLSDFGLAKAGPQGD 256
+ K + +LH ++ V++RD K SNIL E + ++ DFG AK +
Sbjct: 117 EASAVLFTITKTVEYLH--AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
Query: 257 KTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
++ T + APE + + D++S GV+L +LTG
Sbjct: 175 GLLMTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 10/158 (6%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRT-IPLPWSNRI--KI 205
E L HP++V+L+ D +V+EFM L + +R +S +
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 206 ALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNA---KLSDFGLAKAGPQGDKTHVST 262
+ L + H + +I+RD K +LL S+ N+ KL FG+A G+ V+
Sbjct: 136 MRQILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAG 191
Query: 263 RVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
VGT + APE V DV+ GV+L +L+G
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 19 LGSGQFAVVKKC---------REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
++ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S + + D K NI LLD K+ DFGLA G++ + GT +
Sbjct: 129 YLH--SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEF 183
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 162 VKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLP------WSNRIKIALGAAKGLA 214
+ + Y +DD L LV ++ G L L + LP + + IA+ + L
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
++H RD K NIL+D + +L+DFG + D T S+ VGT Y +PE
Sbjct: 196 YVH--------RDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPE 246
Query: 275 YVMT-----GHLTSKSDVYSFGVVLLEILTGR 301
+ G + D +S GV + E+L G
Sbjct: 247 ILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 149 EVDFLGQLHHPNLVKL--IGYCIEDDQRLLVYEF----------MTRGSLENHLFRRTIP 196
E+ L +L HPN++ L + D + L++++ R S N ++ +
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN---KKPVQ 124
Query: 197 LPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEY----NAKLSDFGLAKAG 252
LP + G+ +LH V++RD K +NIL+ E K++D G A+
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANW--VLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 253 PQGDKTHVSTR-VVGTYGYAAPEYVMTG-HLTSKSDVYSFGVVLLEILT 299
K VV T+ Y APE ++ H T D+++ G + E+LT
Sbjct: 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 123/300 (41%), Gaps = 51/300 (17%)
Query: 99 SILGEGGFGYVFKG-WIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH 157
++G+G FG V+ G W E + + + ++ D + + EV Q
Sbjct: 39 ELIGKGRFGQVYHGRWHGE-----------VAIRLIDIERDNEDQLKAFKREVMAYRQTR 87
Query: 158 HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLH 217
H N+V +G C+ ++ +L + + I L + +IA KG+ +LH
Sbjct: 88 HENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147
Query: 218 GGSEPVIYRDFKTSNILLDSEYNAKLSDFGL------AKAGPQGDKTHVSTRVVGTYGYA 271
++ ++++D K+ N+ D+ ++DFGL +AG + DK + G +
Sbjct: 148 --AKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQN---GWLCHL 201
Query: 272 APEYVMTGH---------LTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQY 322
APE + + SDV++ G + E L R K +P+ + W
Sbjct: 202 APEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE-LHAREWPFKTQPA---EAIIWQ--- 254
Query: 323 LADKRKLYQIVDPRLELNYSLKGVQK-VSQLAYNCLSRDPKSRPSMDEVVKVLTPLQDLN 381
+ ++ N S G+ K +S + C + + + RP+ +++ +L L N
Sbjct: 255 ----------MGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 128/304 (42%), Gaps = 56/304 (18%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH-H 158
++ E GY G + G+ +P VAVK + D + E+ L + H
Sbjct: 17 VVSEKILGYGSSGTVVFQGSFQGRP-----VAVKRMLIDFCDIA---LMEIKLLTESDDH 68
Query: 159 PNLVKLIGYCIEDDQRLLVYEF-MTRGSLENHLFRRTIP------LPWSNRIKIALGAAK 211
PN+++ YC E R L + +L++ + + + N I + A
Sbjct: 69 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLD--SEYNAK-----------LSDFGLAK---AGPQG 255
G+A LH S +I+RD K NIL+ S + A +SDFGL K +G
Sbjct: 127 GVAHLH--SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSS 184
Query: 256 DKTHVSTRVVGTYGYAAPEYVMTGH-------LTSKSDVYSFGVVLLEILTGRRSMDKKR 308
+T+++ GT G+ APE + + LT D++S G V IL+ + +
Sbjct: 185 FRTNLNNPS-GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243
Query: 309 PSGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMD 368
S E N++ R ++ + + + + SL + + + L + DP RP+
Sbjct: 244 YSRESNII----------RGIFSLDEMKCLHDRSL--IAEATDLISQMIDHDPLKRPTAM 291
Query: 369 EVVK 372
+V++
Sbjct: 292 KVLR 295
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 45/230 (19%)
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK---- 211
L HPN+V+ + +V E+ + G LF R N + + A+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERI-----CNAGRFSEDEARFFFQ 122
Query: 212 ----GLAFLHGGSEPVIYRDFKTSNILLDSE--YNAKLSDFGLAKAGPQGDKTHVSTRVV 265
G+++ H V +RD K N LLD K++DFG +KA + V
Sbjct: 123 QLISGVSYAHAMQ--VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ---PKSAV 177
Query: 266 GTYGYAAPEYVMTGHLTSK-SDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 324
GT Y APE ++ K +DV+S GV L +L G + P +N
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED--PEEPKNF--------- 226
Query: 325 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSR----DPKSRPSMDEV 370
++ +++I L + Y++ +S + +SR DP R S+ E+
Sbjct: 227 -RKTIHRI----LNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 172 DQRLLVYEFMTRGSL---ENHLF----RRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVI 224
D+ ++YE+M S+ + + F T +P I +++H + +
Sbjct: 116 DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN-EKNIC 174
Query: 225 YRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVM--TGHLT 282
+RD K SNIL+D KLSDFG ++ DK +R GTY + PE+ + +
Sbjct: 175 HRDVKPSNILMDKNGRVKLSDFG--ESEYMVDKKIKGSR--GTYEFMPPEFFSNESSYNG 230
Query: 283 SKSDVYSFGVVL 294
+K D++S G+ L
Sbjct: 231 AKVDIWSLGICL 242
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 121/299 (40%), Gaps = 50/299 (16%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH-H 158
++ E GY G + G+ +P VAVK + D + E+ L + H
Sbjct: 35 VVSEKILGYGSSGTVVFQGSFQGRP-----VAVKRMLIDFCDIA---LMEIKLLTESDDH 86
Query: 159 PNLVKLIGYCIEDDQRLLVYEF-MTRGSLENHLFRRTIP------LPWSNRIKIALGAAK 211
PN+++ YC E R L + +L++ + + + N I + A
Sbjct: 87 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLD--SEYNAK-----------LSDFGLAKAGPQGDKT 258
G+A LH S +I+RD K NIL+ S + A +SDFGL K G
Sbjct: 145 GVAHLH--SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 259 HVST--RVVGTYGYAAPEYVMTG---HLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
GT G+ APE + LT D++S G V IL+ + + S E
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 262
Query: 314 NLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
N++ R ++ + + + + SL + + + L + DP RP+ +V++
Sbjct: 263 NII----------RGIFSLDEMKCLHDRSL--IAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 121/299 (40%), Gaps = 50/299 (16%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH-H 158
++ E GY G + G+ +P VAVK + D + E+ L + H
Sbjct: 35 VVSEKILGYGSSGTVVFQGSFQGRP-----VAVKRMLIDFCDIA---LMEIKLLTESDDH 86
Query: 159 PNLVKLIGYCIEDDQRLLVYEF-MTRGSLENHLFRRTIP------LPWSNRIKIALGAAK 211
PN+++ YC E R L + +L++ + + + N I + A
Sbjct: 87 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLD--SEYNAK-----------LSDFGLAKAGPQGDKT 258
G+A LH S +I+RD K NIL+ S + A +SDFGL K G
Sbjct: 145 GVAHLH--SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 259 HVST--RVVGTYGYAAPEYVMTG---HLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQ 313
GT G+ APE + LT D++S G V IL+ + + S E
Sbjct: 203 FRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 262
Query: 314 NLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDEVVK 372
N++ R ++ + + + + SL + + + L + DP RP+ +V++
Sbjct: 263 NII----------RGIFSLDEMKCLHDRSL--IAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 47/231 (20%)
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK---- 211
L HPN+V+ + ++ E+ + G L + N + + A+
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI---------CNAGRFSEDEARFFFQ 123
Query: 212 ----GLAFLHGGSEPVIYRDFKTSNILLDSE--YNAKLSDFGLAKAGPQGDKTHVSTRVV 265
G+++ H S + +RD K N LLD K+ DFG +K+ + + V
Sbjct: 124 QLLSGVSYCH--SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---V 178
Query: 266 GTYGYAAPEYVMTGHLTSK-SDVYSFGVVLLEILTGRRSM-DKKRPSGEQNLVAWARQYL 323
GT Y APE ++ K +DV+S GV L +L G D + P
Sbjct: 179 GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR------------- 225
Query: 324 ADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSR----DPKSRPSMDEV 370
D RK Q + L + YS+ ++S + +SR DP +R S+ E+
Sbjct: 226 -DYRKTIQRI---LSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEI 272
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 44/232 (18%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKP--DGLQGHREWVAEVDFLGQLH 157
++G G +G+V + + + VA+K + + L + + E+ L +L+
Sbjct: 60 LIGTGSYGHVCEAYDKLEKR---------VVAIKKILRVFEDLIDCKRILREIAILNRLN 110
Query: 158 HPNLVKLIGYCIEDD----QRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGL 213
H ++VK++ I D L V + + LFR + L + + G+
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKK-LFRTPVYLTELHIKTLLYNLLVGV 169
Query: 214 AFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKA-------------GPQGDKTHV 260
++H +++RD K +N L++ + + K+ DFGLA+ P+ D ++
Sbjct: 170 KYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227
Query: 261 STRV------------VGTYGYAAPEYV-MTGHLTSKSDVYSFGVVLLEILT 299
T V T Y APE + + + T DV+S G + E+L
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 20 LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
Q+ H N++ L +L+ E ++ G L + L ++ L G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVN 129
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH ++ + + D K NI LLD + KL DFGLA G + + GT +
Sbjct: 130 YLH--TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEF 184
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 20 LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
Q+ H N++ L +L+ E ++ G L + L ++ L G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVN 129
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH ++ + + D K NI LLD + KL DFGLA G + + GT +
Sbjct: 130 YLH--TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEF 184
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 20 LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
Q+ H N++ L +L+ E ++ G L + L ++ L G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVN 129
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH ++ + + D K NI LLD + KL DFGLA G + + GT +
Sbjct: 130 YLH--TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEF 184
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 20 LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
Q+ H N++ L +L+ E ++ G L + L ++ L G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVN 129
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH ++ + + D K NI LLD + KL DFGLA G + + GT +
Sbjct: 130 YLH--TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEF 184
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIK--IALGAAKGLA 214
HPN++ L + LV E M G L + + R+ +S R + K +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTVE 135
Query: 215 FLHGGSEPVIYRDFKTSNIL-LDSEYNA---KLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S+ V++RD K SNIL +D N ++ DFG AK + + + T T +
Sbjct: 136 YLH--SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-LRAENGLLMTPCY-TANF 191
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE + D++S G++L +L G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 14/157 (8%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQ-----RLLVYEFMTRGSLENHLFRRTIPLPWSNRI 203
E+ L HHPN++ L + ++ LV E M R L + + I + +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQ 137
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAG-PQGDKTHVST 262
GL LH V++RD NILL + + DF LA+ +KTH T
Sbjct: 138 YFMYHILLGLHVLHEAG--VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
Query: 263 RVVGTYGYAAPEYVMTGH-LTSKSDVYSFGVVLLEIL 298
Y APE VM T D++S G V+ E+
Sbjct: 196 H----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 14/157 (8%)
Query: 149 EVDFLGQLHHPNLVKLIGYCIEDDQ-----RLLVYEFMTRGSLENHLFRRTIPLPWSNRI 203
E+ L HHPN++ L + ++ LV E M R L + + I + +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQ 137
Query: 204 KIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAG-PQGDKTHVST 262
GL LH V++RD NILL + + DF LA+ +KTH T
Sbjct: 138 YFMYHILLGLHVLHEAG--VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVT 195
Query: 263 RVVGTYGYAAPEYVMTGH-LTSKSDVYSFGVVLLEIL 298
Y APE VM T D++S G V+ E+
Sbjct: 196 H----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 45/230 (19%)
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK---- 211
L HPN+V+ + +V E+ + G LF R N + + A+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERI-----CNAGRFSEDEARFFFQ 122
Query: 212 ----GLAFLHGGSEPVIYRDFKTSNILLDSE--YNAKLSDFGLAKAGPQGDKTHVSTRVV 265
G+++ H V +RD K N LLD K+ DFG +K+ + V
Sbjct: 123 QLISGVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTV 177
Query: 266 GTYGYAAPEYVMTGHLTSK-SDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 324
GT Y APE ++ K +DV+S GV L +L G + P +N
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED--PEEPKNF--------- 226
Query: 325 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSR----DPKSRPSMDEV 370
++ +++I L + Y++ +S + +SR DP R S+ E+
Sbjct: 227 -RKTIHRI----LNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
Query: 149 EVDFLGQLH-HPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIK--- 204
EV+ L Q H N+++LI + E+D+ LV+E M GS+ +H+ +R N ++
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR----HFNELEASV 115
Query: 205 IALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEYN---AKLSDFGLAKA-GPQGDKTHV 260
+ A L FLH ++ + +RD K NIL + K+ DF L GD + +
Sbjct: 116 VVQDVASALDFLH--NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPI 173
Query: 261 ST----RVVGTYGYAAPEYV-----MTGHLTSKSDVYSFGVVLLEILTG 300
ST G+ Y APE V + D++S GV+L +L+G
Sbjct: 174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 157 HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIK--IALGAAKGLA 214
HPN++ L + LV E M G L + + R+ +S R + K +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTVE 135
Query: 215 FLHGGSEPVIYRDFKTSNIL-LDSEYNA---KLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH S+ V++RD K SNIL +D N ++ DFG AK + + + T T +
Sbjct: 136 YLH--SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-LRAENGLLMTPCY-TANF 191
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE + D++S G++L +L G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 122/303 (40%), Gaps = 54/303 (17%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLH-H 158
++ E GY G + G+ +P VAVK + D + E+ L + H
Sbjct: 17 VVSEKILGYGSSGTVVFQGSFQGRP-----VAVKRMLIDFCDIA---LMEIKLLTESDDH 68
Query: 159 PNLVKLIGYCIEDDQRLLVYEF-MTRGSLENHLFRRTIP------LPWSNRIKIALGAAK 211
PN+++ YC E R L + +L++ + + + N I + A
Sbjct: 69 PNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 212 GLAFLHGGSEPVIYRDFKTSNILLD--SEYNAK-----------LSDFGLAKAGPQGDKT 258
G+A LH S +I+RD K NIL+ S + A +SDFGL K G
Sbjct: 127 GVAHLH--SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 184
Query: 259 HVST--RVVGTYGYAAPEYVMTGH-------LTSKSDVYSFGVVLLEILTGRRSMDKKRP 309
GT G+ APE + + LT D++S G V IL+ + +
Sbjct: 185 FRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244
Query: 310 SGEQNLVAWARQYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSRDPKSRPSMDE 369
S E N++ R ++ + + + + SL + + + L + DP RP+ +
Sbjct: 245 SRESNII----------RGIFSLDEMKCLHDRSL--IAEATDLISQMIDHDPLKRPTAMK 292
Query: 370 VVK 372
V++
Sbjct: 293 VLR 295
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 45/230 (19%)
Query: 156 LHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAK---- 211
L HPN+V+ + +V E+ + G LF R N + + A+
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGE----LFERI-----CNAGRFSEDEARFFFQ 121
Query: 212 ----GLAFLHGGSEPVIYRDFKTSNILLDSE--YNAKLSDFGLAKAGPQGDKTHVSTRVV 265
G+++ H V +RD K N LLD K+ DFG +K+ + V
Sbjct: 122 QLISGVSYCHAMQ--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTV 176
Query: 266 GTYGYAAPEYVMTGHLTSK-SDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVAWARQYLA 324
GT Y APE ++ K +DV+S GV L +L G + P +N
Sbjct: 177 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED--PEEPKNF--------- 225
Query: 325 DKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSR----DPKSRPSMDEV 370
++ +++I L + Y++ +S + +SR DP R S+ E+
Sbjct: 226 -RKTIHRI----LNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEI 270
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 101 LGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVA------EVDFLG 154
LG G F V K + +G+ A K +K + R V+ EV L
Sbjct: 20 LGSGQFAIVKKC---------REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 155 QLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLA 214
Q+ H N++ L +L+ E ++ G L + L ++ L G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVN 129
Query: 215 FLHGGSEPVIYRDFKTSNI-LLDSEY---NAKLSDFGLAKAGPQGDKTHVSTRVVGTYGY 270
+LH ++ + + D K NI LLD + KL DFGLA G + + GT +
Sbjct: 130 YLH--TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEF 184
Query: 271 AAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
APE V L ++D++S GV+ +L+G
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
ILG+G VF+G ++ G A + + L+P +Q + E + L +L+H
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIK---VFNNISFLRPVDVQ-----MREFEVLKKLNHK 67
Query: 160 NLVKLIGYCIEDD----QRLLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGAAKGL 213
N+VKL + IE++ ++L+ EF GSL L LP S + + G+
Sbjct: 68 NIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 214 AFLHGGSEPVIYRDFKTSNILL----DSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYG 269
L +++R+ K NI+ D + KL+DFG A+ + D+ VS + GT
Sbjct: 126 NHLRENG--IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE-LEDDEQFVS--LYGTEE 180
Query: 270 YAAPEYVMTGHLT--------SKSDVYSFGVVLLEILTG 300
Y P+ L + D++S GV TG
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 162 VKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLP------WSNRIKIALGAAKGLA 214
+ + Y +D+ L LV ++ G L L + LP + + +A+ + L
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
++H RD K N+LLD + +L+DFG + D T S+ VGT Y +PE
Sbjct: 212 YVH--------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPE 262
Query: 275 YVMT-----GHLTSKSDVYSFGVVLLEILTGR 301
+ G + D +S GV + E+L G
Sbjct: 263 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 162 VKLIGYCIEDDQRL-LVYEFMTRGSLENHLFRRTIPLP------WSNRIKIALGAAKGLA 214
+ + Y +D+ L LV ++ G L L + LP + + +A+ + L
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 215 FLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPE 274
++H RD K N+LLD + +L+DFG + D T S+ VGT Y +PE
Sbjct: 196 YVH--------RDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPE 246
Query: 275 YVMT-----GHLTSKSDVYSFGVVLLEILTGR 301
+ G + D +S GV + E+L G
Sbjct: 247 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 144 REWVAEVDFLGQL-HHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTIPLPWSNR 202
R+ E++ L + HPN++ L + +V E G L + + R+ +S R
Sbjct: 60 RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF---FSER 116
Query: 203 --IKIALGAAKGLAFLHGGSEPVIYRDFKTSNILLDSEY----NAKLSDFGLAKAGPQGD 256
+ K + +LH ++ V++RD K SNIL E + ++ DFG AK + +
Sbjct: 117 EASAVLFTITKTVEYLH--AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAE 173
Query: 257 KTHVSTRVVGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEILTG 300
+ T T + APE + + D++S GV+L LTG
Sbjct: 174 NGLLXTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 17/215 (7%)
Query: 93 GNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDF 152
G + +LGEG +G V + + ++ T + + P+G ++ E+
Sbjct: 5 GKYLMGDLLGEGSYGKVKE--VLDSETLCRRAVKILKKKKLRRIPNGEANVKK---EIQL 59
Query: 153 LGQLHHPNLVKLIG--YCIEDDQRLLVYEFMTRGSLE--NHLFRRTIPLPWSNRIKIALG 208
L +L H N+++L+ Y E + +V E+ G E + + + P+ ++ L
Sbjct: 60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQL- 118
Query: 209 AAKGLAFLHGGSEPVIYRDFKTSNILLDSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTY 268
GL +LH S+ ++++D K N+LL + K+S G+A+A G+
Sbjct: 119 -IDGLEYLH--SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSP 175
Query: 269 GYAAPEYVMTGHLT---SKSDVYSFGVVLLEILTG 300
+ PE + G T K D++S GV L I TG
Sbjct: 176 AFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 33/219 (15%)
Query: 100 ILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHP 159
ILG+G VF+G ++ G A + + L+P +Q + E + L +L+H
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIK---VFNNISFLRPVDVQ-----MREFEVLKKLNHK 67
Query: 160 NLVKLIGYCIEDD----QRLLVYEFMTRGSLENHLFR--RTIPLPWSNRIKIALGAAKGL 213
N+VKL + IE++ ++L+ EF GSL L LP S + + G+
Sbjct: 68 NIVKL--FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 214 AFLHGGSEPVIYRDFKTSNILL----DSEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYG 269
L +++R+ K NI+ D + KL+DFG A+ + D+ V + GT
Sbjct: 126 NHLR--ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE-LEDDEQFVX--LYGTEE 180
Query: 270 YAAPEYVMTGHLT--------SKSDVYSFGVVLLEILTG 300
Y P+ L + D++S GV TG
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 2 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 52
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 53 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 112
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 113 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 159
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 160 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 215
Query: 291 GVVLLEILTG 300
G++L +++ G
Sbjct: 216 GILLYDMVCG 225
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 15 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 65
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 66 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 125
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 126 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 172
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 173 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 291 GVVLLEILTG 300
G++L +++ G
Sbjct: 229 GILLYDMVCG 238
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 3 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 53
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 54 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 113
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 114 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 160
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 161 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216
Query: 291 GVVLLEILTG 300
G++L +++ G
Sbjct: 217 GILLYDMVCG 226
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 2 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 52
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 53 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 112
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 113 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 159
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 160 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 215
Query: 291 GVVLLEILTG 300
G++L +++ G
Sbjct: 216 GILLYDMVCG 225
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 16 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 66
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 67 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 126
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 127 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 173
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 174 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 291 GVVLLEILTG 300
G++L +++ G
Sbjct: 230 GILLYDMVCG 239
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 3 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 53
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 54 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 113
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 114 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 160
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 161 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216
Query: 291 GVVLLEILTG 300
G++L +++ G
Sbjct: 217 GILLYDMVCG 226
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 15 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 65
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 66 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 125
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 126 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 172
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 173 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 291 GVVLLEILTG 300
G++L +++ G
Sbjct: 229 GILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 16 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 66
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 67 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 126
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 127 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 173
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 174 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 291 GVVLLEILTG 300
G++L +++ G
Sbjct: 230 GILLYDMVCG 239
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 119/294 (40%), Gaps = 64/294 (21%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 16 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 66
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 67 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 126
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 127 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 173
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 174 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 291 GVVLLEILTGRRSMD------------KKRPSGE-QNLVAWARQYLADKRKLYQ 331
G++L +++ G + ++R S E Q+L+ W R ++
Sbjct: 230 GILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 283
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 30 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 80
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 81 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 140
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 141 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 187
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 188 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243
Query: 291 GVVLLEILTG 300
G++L +++ G
Sbjct: 244 GILLYDMVCG 253
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 3 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 53
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 54 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 113
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 114 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 160
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 161 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216
Query: 291 GVVLLEILTG 300
G++L +++ G
Sbjct: 217 GILLYDMVCG 226
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 35 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 85
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 86 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 145
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 146 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 192
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 193 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 248
Query: 291 GVVLLEILTG 300
G++L +++ G
Sbjct: 249 GILLYDMVCG 258
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 30 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 80
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 81 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 140
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 141 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 187
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 188 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243
Query: 291 GVVLLEILTG 300
G++L +++ G
Sbjct: 244 GILLYDMVCG 253
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 119/294 (40%), Gaps = 64/294 (21%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 15 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 65
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 66 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 125
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 126 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 172
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 173 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 291 GVVLLEILTGRRSMD------------KKRPSGE-QNLVAWARQYLADKRKLYQ 331
G++L +++ G + ++R S E Q+L+ W R ++
Sbjct: 229 GILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFE 282
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 16 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 66
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 67 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 126
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 127 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 173
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 174 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 291 GVVLLEILTG 300
G++L +++ G
Sbjct: 230 GILLYDMVCG 239
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 15 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 65
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 66 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 125
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 126 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 172
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 173 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 291 GVVLLEILTG 300
G++L +++ G
Sbjct: 229 GILLYDMVCG 238
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 51/250 (20%)
Query: 76 SPCQLLQFT----FQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVA 131
+PC L T +E + ++ +LG GGFG V+ G + + VA
Sbjct: 22 APCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSG---------IRVSDNLPVA 72
Query: 132 VKSLKPDGLQGHREW------VAEVDFLGQLH--HPNLVKLIGYCIEDDQRLLV------ 177
+K ++ D + E EV L ++ +++L+ + D +L+
Sbjct: 73 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 132
Query: 178 ----YEFMT-RGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHGGSEPVIYRDFKTSN 232
++F+T RG+L+ L R W L A + H + V++RD K N
Sbjct: 133 VQDLFDFITERGALQEELARSFF---WQ-----VLEAVR-----HCHNCGVLHRDIKDEN 179
Query: 233 ILLD-SEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTSKS-DVYSF 290
IL+D + KL DFG K V T GT Y+ PE++ +S V+S
Sbjct: 180 ILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 235
Query: 291 GVVLLEILTG 300
G++L +++ G
Sbjct: 236 GILLYDMVCG 245
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,271,093
Number of Sequences: 62578
Number of extensions: 565212
Number of successful extensions: 4023
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 1452
Number of HSP's gapped (non-prelim): 1123
length of query: 429
length of database: 14,973,337
effective HSP length: 102
effective length of query: 327
effective length of database: 8,590,381
effective search space: 2809054587
effective search space used: 2809054587
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)