Your job contains 1 sequence.
>014204
MYHHHFLHQHQHSWLRQTPFASSSSSAEKSAAASDTNQGNNCGFQPLSLAMNPTSAEQNG
PIITTAITPLQVQGVAADNRKRPMGKATAAKEPVPRKSIDSFGQRTSQYRGVTRHRWTGR
YEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKYWGATTHINFPLSTYEK
ELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGT
FSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIASDLAKRSPKDSAPLV
LEDYNSCASSTSPQPLAISNGEASDELVDMVWSANSDDHQHQNTNTNNETSLGASGSRNS
SNPESPKCPVGLTSEFGMSGAEYNEGYFSSPGTKYENCDDDNGGNHSTNNRLVNLGLVHH
VPMFALWNE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014204
(429 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2030265 - symbol:AT1G72570 species:3702 "Arabi... 951 1.2e-95 1
TAIR|locus:2173009 - symbol:AIL5 "AINTEGUMENTA-like 5" sp... 899 4.0e-90 1
TAIR|locus:2178915 - symbol:BBM "BABY BOOM" species:3702 ... 871 7.1e-90 2
TAIR|locus:2091891 - symbol:PLT1 "PLETHORA 1" species:370... 877 8.6e-88 1
TAIR|locus:2008216 - symbol:PLT2 "PLETHORA 2" species:370... 875 1.4e-87 1
TAIR|locus:2137559 - symbol:ANT "AINTEGUMENTA" species:37... 873 2.3e-87 1
TAIR|locus:2155680 - symbol:AIL7 "AINTEGUMENTA-like 7" sp... 833 3.9e-83 1
TAIR|locus:2200477 - symbol:ADAP "ARIA-interacting double... 655 2.9e-64 1
TAIR|locus:2017829 - symbol:WRI4 "WRINKLED 4" species:370... 637 2.3e-62 1
TAIR|locus:2005493 - symbol:AP2 "APETALA 2" species:3702 ... 442 1.1e-41 1
TAIR|locus:2155598 - symbol:TOE3 "target of early activat... 418 3.7e-39 1
TAIR|locus:2082732 - symbol:SMZ "SCHLAFMUTZE" species:370... 268 2.9e-23 1
TAIR|locus:2056048 - symbol:SNZ "SCHNARCHZAPFEN" species:... 262 1.3e-22 1
TAIR|locus:2061956 - symbol:ERF71 "ethylene response fact... 133 3.7e-08 1
TAIR|locus:2024249 - symbol:ERF10 "ERF domain protein 10"... 145 8.7e-08 1
TAIR|locus:2015061 - symbol:AT1G22190 species:3702 "Arabi... 125 3.5e-07 2
TAIR|locus:2176511 - symbol:AT5G43410 species:3702 "Arabi... 123 4.5e-07 1
TAIR|locus:2042496 - symbol:ERF15 "ethylene-responsive el... 133 4.9e-07 2
TAIR|locus:2018289 - symbol:ERF14 "Ethylene-responsive el... 122 5.8e-07 1
TAIR|locus:2086203 - symbol:ESE1 "ethylene and salt induc... 121 7.4e-07 1
TAIR|locus:2037698 - symbol:SHN1 "SHINE 1" species:3702 "... 132 9.5e-07 1
TAIR|locus:2086223 - symbol:ERF1 "ethylene response facto... 134 1.0e-06 1
TAIR|locus:2151576 - symbol:AT5G61590 species:3702 "Arabi... 131 1.4e-06 1
TAIR|locus:2038500 - symbol:ORA59 "octadecanoid-responsiv... 133 2.3e-06 1
TAIR|locus:2086213 - symbol:TDR1 "Transcriptional Regulat... 116 2.6e-06 1
TAIR|locus:2034295 - symbol:AT1G36060 species:3702 "Arabi... 134 3.8e-06 1
TAIR|locus:2194007 - symbol:ERF73 "ethylene response fact... 118 5.0e-06 2
TAIR|locus:2176187 - symbol:AT5G51190 species:3702 "Arabi... 127 7.9e-06 1
TAIR|locus:2090975 - symbol:RAP2.2 "related to AP2 2" spe... 125 1.4e-05 2
TAIR|locus:2018635 - symbol:RAP2.6 "related to AP2 6" spe... 121 2.0e-05 1
TAIR|locus:2135282 - symbol:AT4G39780 species:3702 "Arabi... 126 2.1e-05 1
UNIPROTKB|Q5MFV2 - symbol:BIERF2 "BTH-induced ERF transcr... 122 4.0e-05 1
TAIR|locus:2094897 - symbol:AT3G16280 species:3702 "Arabi... 122 4.0e-05 1
TAIR|locus:2131854 - symbol:CBF1 "C-repeat/DRE binding fa... 120 4.8e-05 1
TAIR|locus:2151591 - symbol:ERF104 "ethylene response fac... 121 5.6e-05 1
TAIR|locus:2825329 - symbol:AT1G71450 species:3702 "Arabi... 116 6.5e-05 1
TAIR|locus:2032500 - symbol:ERF11 "ERF domain protein 11"... 113 6.6e-05 1
TAIR|locus:2197076 - symbol:RAP2.12 "related to AP2 12" s... 124 6.6e-05 1
TAIR|locus:2058764 - symbol:ERF38 "ERF family protein 38"... 117 7.1e-05 1
TAIR|locus:505006142 - symbol:CRF7 "AT1G22985" species:37... 111 7.2e-05 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 123 7.5e-05 1
TAIR|locus:2051359 - symbol:ERF53 "ERF domain 53" species... 122 9.8e-05 1
TAIR|locus:2129111 - symbol:AT4G16750 species:3702 "Arabi... 114 0.00010 1
TAIR|locus:2171840 - symbol:AT5G65130 species:3702 "Arabi... 120 0.00011 1
TAIR|locus:2131849 - symbol:DREB1A "dehydration response ... 117 0.00011 1
TAIR|locus:2055007 - symbol:AT2G44940 species:3702 "Arabi... 120 0.00013 1
TAIR|locus:2132962 - symbol:CRF4 "AT4G27950" species:3702... 121 0.00013 1
TAIR|locus:2171514 - symbol:ERF2 "ethylene responsive ele... 118 0.00013 1
TAIR|locus:2124504 - symbol:AT4G18450 species:3702 "Arabi... 120 0.00013 1
TAIR|locus:2145477 - symbol:SHN3 "shine3" species:3702 "A... 114 0.00015 1
TAIR|locus:2167659 - symbol:ERF9 "erf domain protein 9" s... 115 0.00015 1
TAIR|locus:2129106 - symbol:ERF6 "AT4G17490" species:3702... 119 0.00015 1
TAIR|locus:2012653 - symbol:AT1G33760 species:3702 "Arabi... 113 0.00016 1
TAIR|locus:2825842 - symbol:RAP2.1 "related to AP2 1" spe... 107 0.00017 1
TAIR|locus:2195985 - symbol:AT1G77200 species:3702 "Arabi... 117 0.00017 1
TAIR|locus:2026301 - symbol:CRF8 "AT1G71130" species:3702... 109 0.00019 1
TAIR|locus:2134128 - symbol:AT4G32800 species:3702 "Arabi... 115 0.00022 1
TAIR|locus:2087065 - symbol:ERF4 "ethylene responsive ele... 115 0.00022 1
TAIR|locus:2145249 - symbol:tny "TINY" species:3702 "Arab... 114 0.00027 1
UNIPROTKB|Q5MFV3 - symbol:BIERF1 "BTH-induced ERF transcr... 119 0.00029 1
TAIR|locus:2055002 - symbol:ERF13 "ethylene-responsive el... 114 0.00030 1
TAIR|locus:2089368 - symbol:EBP "ethylene-responsive elem... 114 0.00040 1
TAIR|locus:2156171 - symbol:AT5G61890 species:3702 "Arabi... 114 0.00040 1
TAIR|locus:2144296 - symbol:TINY2 "AT5G11590" species:370... 113 0.00045 1
TAIR|locus:2123708 - symbol:AT4G28140 species:3702 "Arabi... 115 0.00045 1
TAIR|locus:2043495 - symbol:ESE2 "ethylene and salt induc... 112 0.00051 1
TAIR|locus:2005704 - symbol:AT1G75490 species:3702 "Arabi... 110 0.00065 1
TAIR|locus:2029491 - symbol:RAP2.4 "related to AP2 4" spe... 114 0.00076 1
TAIR|locus:2183861 - symbol:Rap2.6L "related to AP2 6l" s... 109 0.00095 1
TAIR|locus:2060385 - symbol:AT2G22200 species:3702 "Arabi... 111 0.00099 1
>TAIR|locus:2030265 [details] [associations]
symbol:AT1G72570 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=ISS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
EMBL:AY603417 EMBL:AC010926 EMBL:DQ446422 EMBL:DQ652930
IPI:IPI00529030 PIR:B96750 RefSeq:NP_177401.2 UniGene:At.50661
ProteinModelPortal:Q1PFE1 SMR:Q1PFE1 EnsemblPlants:AT1G72570.1
GeneID:843589 KEGG:ath:AT1G72570 TAIR:At1g72570 eggNOG:NOG295761
HOGENOM:HOG000239258 InParanoid:Q1PFE1 KO:K09285 OMA:TPPLRIC
PhylomeDB:Q1PFE1 ProtClustDB:CLSN2920249 Genevestigator:Q1PFE1
Uniprot:Q1PFE1
Length = 415
Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
Identities = 183/259 (70%), Positives = 208/259 (80%)
Query: 39 GNNCGFQPLSLAMNPTSAEQNGPIITTAITPLQVQG-VAADNRKRPMGKATAAKEPVPRK 97
G N LSLA++ + +I + +V+ V D +++ + KE VPRK
Sbjct: 156 GYNTNGSMLSLALSHGACSD---LINESNVSARVEEPVKVDEKRKRLVVKPQVKESVPRK 212
Query: 98 SIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAY 157
S+DS+GQRTSQYRGVTRHRWTGRYEAHLWDNSC+KEGQTR+GRQVYLGGYD+E+KAARAY
Sbjct: 213 SVDSYGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRRGRQVYLGGYDEEEKAARAY 272
Query: 158 DLAALKYWGATTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRH 217
DLAALKYWG TTH+NFPLS YEKE+EE+ +M RQEFVA LRR SSGFSRGASVYRGVTRH
Sbjct: 273 DLAALKYWGPTTHLNFPLSNYEKEIEELNNMNRQEFVAMLRRNSSGFSRGASVYRGVTRH 332
Query: 218 HQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDISRYDVKRI 277
HQHGRWQARIGRVAGNKDLYLGTFSTQ YDIAAIKFRG +AVTNFDI+RYDVKRI
Sbjct: 333 HQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDINRYDVKRI 392
Query: 278 CSSSTLIASDLAKRSPKDS 296
CSSST++ SD AK SP S
Sbjct: 393 CSSSTIVDSDQAKHSPTSS 411
>TAIR|locus:2173009 [details] [associations]
symbol:AIL5 "AINTEGUMENTA-like 5" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0009845 "seed
germination" evidence=RCA;IMP] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0060771 "phyllotactic patterning" evidence=IGI]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=ISS;IMP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009845
HOGENOM:HOG000239258 KO:K09285 EMBL:AY585685 EMBL:AB016891
IPI:IPI00518096 RefSeq:NP_200549.2 UniGene:At.29336
ProteinModelPortal:Q6PQQ3 SMR:Q6PQQ3 EnsemblPlants:AT5G57390.1
GeneID:835845 KEGG:ath:AT5G57390 GeneFarm:2582 TAIR:At5g57390
eggNOG:NOG258934 InParanoid:Q6PQQ3 OMA:WINNNIS PhylomeDB:Q6PQQ3
ProtClustDB:CLSN2681678 Genevestigator:Q6PQQ3 GO:GO:0060771
GO:GO:0040019 Uniprot:Q6PQQ3
Length = 558
Score = 899 (321.5 bits), Expect = 4.0e-90, P = 4.0e-90
Identities = 168/223 (75%), Positives = 189/223 (84%)
Query: 75 VAADNRKRPMGKATAAKEPVPRKSIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEG 134
V++ ++++P A + P P+K+++SFGQRTS YRGVTRHRWTGRYEAHLWDNSCR+EG
Sbjct: 170 VSSVHKQQPNPLAVSEASPTPKKNVESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREG 229
Query: 135 QTRKGRQVYLGGYDKEDKAARAYDLAALKYWGATTHINFPLSTYEKELEEMKHMTRQEFV 194
Q+RKGRQVYLGGYDKEDKAARAYDLAALKYWG TT NFP+S YE ELEEMKHMTRQEFV
Sbjct: 230 QSRKGRQVYLGGYDKEDKAARAYDLAALKYWGPTTTTNFPISNYESELEEMKHMTRQEFV 289
Query: 195 ANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIA 254
A+LRRKSSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQ YDIA
Sbjct: 290 ASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIA 349
Query: 255 AIKFRGTSAVTNFDISRYDVKRICSSSTLIASDLAKRSPKDSA 297
AIKFRG +AVTNFDISRYDVK I S + + + K SP +A
Sbjct: 350 AIKFRGLNAVTNFDISRYDVKSIASCNLPVGGLMPKPSPATAA 392
>TAIR|locus:2178915 [details] [associations]
symbol:BBM "BABY BOOM" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009887 "organ
morphogenesis" evidence=ISS;IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0007275 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AL391142
HOGENOM:HOG000239258 KO:K09285 EMBL:AF317907 EMBL:AY585684
IPI:IPI00523422 PIR:T51580 RefSeq:NP_197245.2 UniGene:At.50710
ProteinModelPortal:Q6PQQ4 SMR:Q6PQQ4 STRING:Q6PQQ4
EnsemblPlants:AT5G17430.1 GeneID:831609 KEGG:ath:AT5G17430
TAIR:At5g17430 eggNOG:NOG311645 InParanoid:Q6PQQ4 OMA:EIAYNAR
PhylomeDB:Q6PQQ4 ProtClustDB:CLSN2925597 ArrayExpress:Q6PQQ4
Genevestigator:Q6PQQ4 GermOnline:AT5G17430 Uniprot:Q6PQQ4
Length = 584
Score = 871 (311.7 bits), Expect = 7.1e-90, Sum P(2) = 7.1e-90
Identities = 162/200 (81%), Positives = 176/200 (88%)
Query: 92 EPVPRKSIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKED 151
E P+K+I+SFGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQTRKGRQVYLGGYDKE+
Sbjct: 194 ETTPKKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEE 253
Query: 152 KAARAYDLAALKYWGATTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVY 211
KAARAYDLAALKYWG TT NFPLS YEKE+EEMKHMTRQE+VA+LRRKSSGFSRGAS+Y
Sbjct: 254 KAARAYDLAALKYWGTTTTTNFPLSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIY 313
Query: 212 RGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDISR 271
RGVTRHHQHGRWQARIGRVAGNKDLYLGTF TQ YDIAAIKFRG SAVTNFD++R
Sbjct: 314 RGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLSAVTNFDMNR 373
Query: 272 YDVKRICSSSTLIASDLAKR 291
Y+VK I S +L AKR
Sbjct: 374 YNVKAILESPSLPIGSSAKR 393
Score = 45 (20.9 bits), Expect = 7.1e-90, Sum P(2) = 7.1e-90
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 405 NHSTNNRLVNLGLVHHVPMFALWNE 429
NHS+N G P F++WN+
Sbjct: 559 NHSSNMYFHGEGGGEGAPTFSVWND 583
>TAIR|locus:2091891 [details] [associations]
symbol:PLT1 "PLETHORA 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0048364 "root development" evidence=IGI;IMP] [GO:0051302
"regulation of cell division" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006950 GO:GO:0009734 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000239258 GO:GO:0007389 GO:GO:0019827
GO:GO:0051302 EMBL:AB025629 EMBL:AY506549 EMBL:AY585682
IPI:IPI00534725 RefSeq:NP_188720.2 UniGene:At.38171
ProteinModelPortal:Q5YGP8 SMR:Q5YGP8 EnsemblPlants:AT3G20840.1
GeneID:821632 KEGG:ath:AT3G20840 TAIR:At3g20840 eggNOG:NOG263958
InParanoid:Q5YGP8 OMA:NSSYHEL PhylomeDB:Q5YGP8
ProtClustDB:CLSN2680750 Genevestigator:Q5YGP8 Uniprot:Q5YGP8
Length = 574
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 176/249 (70%), Positives = 200/249 (80%)
Query: 45 QPLSLAMNPTSAEQNGPIITTAITPLQVQGVAADNRKRPMGKATAAKEPV-PRKSIDSFG 103
Q L+L+M T+A N ++ A +P + G DN G A A E PR+++D+FG
Sbjct: 127 QSLTLSMG-TTAGNN--VVDKA-SPSETTG---DNAS---GGALAVVETATPRRALDTFG 176
Query: 104 QRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALK 163
QRTS YRGVTRHRWTGRYEAHLWDNSCR+EGQ+RKGRQVYLGGYDKEDKAAR+YDLAALK
Sbjct: 177 QRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARSYDLAALK 236
Query: 164 YWGATTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRW 223
YWG +T NFP++ YEKE+EEMKHMTRQEFVA +RRKSSGFSRGAS+YRGVTRHHQHGRW
Sbjct: 237 YWGPSTTTNFPITNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRW 296
Query: 224 QARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTL 283
QARIGRVAGNKDLYLGTFST+ YDIAAIKFRG +AVTNF+I+RYDVK I SSTL
Sbjct: 297 QARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESSTL 356
Query: 284 -IASDLAKR 291
I AKR
Sbjct: 357 PIGGGAAKR 365
>TAIR|locus:2008216 [details] [associations]
symbol:PLT2 "PLETHORA 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007389 "pattern specification process"
evidence=IMP] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0048364 "root development" evidence=IGI;IMP] [GO:0051302
"regulation of cell division" evidence=IMP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048364 Gene3D:3.30.730.10 SUPFAM:SSF54171
HOGENOM:HOG000239258 KO:K09285 GO:GO:0007389 GO:GO:0019827
eggNOG:NOG311645 GO:GO:0051302 EMBL:AC006085
ProtClustDB:CLSN2680750 EMBL:AY506550 EMBL:AY585681 EMBL:BT020277
EMBL:BT020460 IPI:IPI00543980 PIR:F96549 RefSeq:NP_175530.2
UniGene:At.49968 ProteinModelPortal:Q5YGP7 SMR:Q5YGP7 IntAct:Q5YGP7
STRING:Q5YGP7 EnsemblPlants:AT1G51190.1 GeneID:841542
KEGG:ath:AT1G51190 TAIR:At1g51190 InParanoid:Q5YGP7 OMA:CASNAPN
PhylomeDB:Q5YGP7 Genevestigator:Q5YGP7 Uniprot:Q5YGP7
Length = 568
Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
Identities = 170/249 (68%), Positives = 198/249 (79%)
Query: 45 QPLSLAMNPTSAEQNGPIITTAITPLQVQGVAADNRKRPMGKATAA-KEPVPRKSIDSFG 103
Q L+L+M T A + T +P + +ADN + A E PR+++++FG
Sbjct: 130 QSLTLSMGSTGAAA-AEVATVKASPAET---SADNSSSTTNTSGGAIVEATPRRTLETFG 185
Query: 104 QRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALK 163
QRTS YRGVTRHRWTGRYEAHLWDNSCR+EGQ+RKGRQVYLGGYDKE+KAARAYDLAALK
Sbjct: 186 QRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALK 245
Query: 164 YWGATTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRW 223
YWG +T NFP++ YEKE+EEMK+MTRQEFVA++RRKSSGFSRGAS+YRGVTRHHQHGRW
Sbjct: 246 YWGPSTTTNFPITNYEKEVEEMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRW 305
Query: 224 QARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTL 283
QARIGRVAGNKDLYLGTFST+ YDIAAIKFRG +AVTNF+I+RYDVK I S+TL
Sbjct: 306 QARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESNTL 365
Query: 284 -IASDLAKR 291
I AKR
Sbjct: 366 PIGGGAAKR 374
>TAIR|locus:2137559 [details] [associations]
symbol:ANT "AINTEGUMENTA" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0042127 "regulation of
cell proliferation" evidence=RCA;IMP] [GO:0010492 "maintenance of
shoot apical meristem identity" evidence=IGI] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=IMP;RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0007276 "gamete generation"
evidence=IMP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709 EMBL:AL161592
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0042127
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009908 GO:GO:0010492
HOGENOM:HOG000239258 KO:K09285 EMBL:U40256 EMBL:U41339 EMBL:U44028
EMBL:AR316367 EMBL:AY080706 EMBL:AY117207 IPI:IPI00532315
PIR:S71365 RefSeq:NP_195489.1 UniGene:At.1556
ProteinModelPortal:Q38914 SMR:Q38914 STRING:Q38914 PaxDb:Q38914
PRIDE:Q38914 EnsemblPlants:AT4G37750.1 GeneID:829931
KEGG:ath:AT4G37750 GeneFarm:5116 TAIR:At4g37750 eggNOG:NOG313785
InParanoid:Q38914 OMA:NTTHEPN PhylomeDB:Q38914
ProtClustDB:CLSN2916050 Genevestigator:Q38914 GermOnline:AT4G37750
Uniprot:Q38914
Length = 555
Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
Identities = 169/247 (68%), Positives = 195/247 (78%)
Query: 52 NPTSAEQNGPIITTAITPLQV----QGVAADNRKRPMGKATAA--KEPVPRKSIDSFGQR 105
N QN I+ A+ V +AA +KR K+ V RKSID+FGQR
Sbjct: 221 NQNHQSQNHQQISEALVETSVGFETTTMAAAKKKRGQEDVVVVGQKQIVHRKSIDTFGQR 280
Query: 106 TSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKYW 165
TSQYRGVTRHRWTGRYEAHLWDNS +KEG +RKGRQVYLGGYD E+KAARAYDLAALKYW
Sbjct: 281 TSQYRGVTRHRWTGRYEAHLWDNSFKKEGHSRKGRQVYLGGYDMEEKAARAYDLAALKYW 340
Query: 166 GATTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQA 225
G +TH NF Y+KE+E+MK+MTRQE+VA+LRRKSSGFSRGAS+YRGVTRHHQHGRWQA
Sbjct: 341 GPSTHTNFSAENYQKEIEDMKNMTRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQA 400
Query: 226 RIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIA 285
RIGRVAGNKDLYLGTF TQ YD+AAIKFRGT+AVTNFDI+RYDV RI SS+TL++
Sbjct: 401 RIGRVAGNKDLYLGTFGTQEEAAEAYDVAAIKFRGTNAVTNFDITRYDVDRIMSSNTLLS 460
Query: 286 SDLAKRS 292
+LA+R+
Sbjct: 461 GELARRN 467
>TAIR|locus:2155680 [details] [associations]
symbol:AIL7 "AINTEGUMENTA-like 7" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0060771 "phyllotactic
patterning" evidence=IGI] [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IGI] [GO:0009887 "organ morphogenesis"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010492 HOGENOM:HOG000239258 KO:K09285 GO:GO:0060771
EMBL:AB026639 EMBL:AY560887 IPI:IPI00522908 RefSeq:NP_201354.5
UniGene:At.50720 ProteinModelPortal:Q6J9N8 SMR:Q6J9N8
EnsemblPlants:AT5G65510.1 GeneID:836677 KEGG:ath:AT5G65510
TAIR:At5g65510 eggNOG:NOG295896 InParanoid:Q6J9N8 OMA:HVVESST
Genevestigator:Q6J9N8 Uniprot:Q6J9N8
Length = 498
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 158/249 (63%), Positives = 193/249 (77%)
Query: 79 NRKRPMGKATAAKEPVPRKSIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRK 138
N+K+ + K + + +K +++ GQRTS YRGVTRHRWTGRYEAHLWDNSCR+EGQ RK
Sbjct: 203 NKKKTVSKKETSDDS-KKKIVETLGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARK 261
Query: 139 GRQVYLGGYDKEDKAARAYDLAALKYWGATTHINFPLSTYEKELEEMKHMTRQEFVANLR 198
GRQVYLGGYDKED+AARAYDLAALKYWG+T NFP+S+Y KELEEM HMT+QEF+A+LR
Sbjct: 262 GRQVYLGGYDKEDRAARAYDLAALKYWGSTATTNFPVSSYSKELEEMNHMTKQEFIASLR 321
Query: 199 RKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKF 258
RKSSGFSRGAS+YRGVTRHHQ GRWQARIGRVAGNKDLYLGTF+T+ YDIAAIKF
Sbjct: 322 RKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKF 381
Query: 259 RGTSAVTNFDISRYDVKRICSSSTLIASDLAKRSPKDSAPLVLEDYNSCASSTS-PQPLA 317
RG +AVTNF+++RYD++ + +SS + AKR L LE +S +S + Q
Sbjct: 382 RGINAVTNFEMNRYDIEAVMNSSLPVGGAAAKRH---KLKLALESPSSSSSDHNLQQQQL 438
Query: 318 ISNGEASDE 326
+ + SD+
Sbjct: 439 LPSSSPSDQ 447
>TAIR|locus:2200477 [details] [associations]
symbol:ADAP "ARIA-interacting double AP2 domain protein"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IMP] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0010187
"negative regulation of seed germination" evidence=IMP] [GO:0040008
"regulation of growth" evidence=IMP] [GO:0000981 "sequence-specific
DNA binding RNA polymerase II transcription factor activity"
evidence=IPI] [GO:0045723 "positive regulation of fatty acid
biosynthetic process" evidence=IGI;IMP] [GO:1901959 "positive
regulation of cutin biosynthetic process" evidence=IGI] [GO:0009887
"organ morphogenesis" evidence=ISS] [GO:0003677 "DNA binding"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010187
GO:GO:0040008 KO:K09285 EMBL:AC010924 EMBL:AY045915 EMBL:AY133880
IPI:IPI00524024 IPI:IPI00535618 PIR:D86295 RefSeq:NP_563990.1
RefSeq:NP_973839.1 UniGene:At.11854 ProteinModelPortal:Q94AN4
SMR:Q94AN4 IntAct:Q94AN4 PRIDE:Q94AN4 EnsemblPlants:AT1G16060.1
GeneID:838176 KEGG:ath:AT1G16060 TAIR:At1g16060 eggNOG:NOG326907
HOGENOM:HOG000238389 InParanoid:Q94AN4 OMA:MESQSKE PhylomeDB:Q94AN4
ProtClustDB:CLSN2917011 Genevestigator:Q94AN4 Uniprot:Q94AN4
Length = 345
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 126/226 (55%), Positives = 163/226 (72%)
Query: 86 KATAAKEPVPRKSIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLG 145
KA + PR D+ QR+S +RGVTRHRWTGRYEAHLWD + E QT+KGRQVYLG
Sbjct: 39 KAKRKRRSQPR---DAPPQRSSVHRGVTRHRWTGRYEAHLWDKNSWNETQTKKGRQVYLG 95
Query: 146 GYDKEDKAARAYDLAALKYWGATTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFS 205
YD+ED AARAYDLAALKYWG T +NFPL YE++++EM+ +++E++ +LRRKSSGFS
Sbjct: 96 AYDEEDAAARAYDLAALKYWGRDTILNFPLCNYEEDIKEMESQSKEEYIGSLRRKSSGFS 155
Query: 206 RGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVT 265
RG S YRGV +HH +GRW+ARIGRV GNK LYLGT++TQ YDIAAI++RG +AVT
Sbjct: 156 RGVSKYRGVAKHHHNGRWEARIGRVFGNKYLYLGTYATQEEAAIAYDIAAIEYRGLNAVT 215
Query: 266 NFDISRYDVKRICSSSTLIASDLAKRSPKDSAPLVLEDYNSCASST 311
NFDISRY + + A++L + D +P + ++ S S +
Sbjct: 216 NFDISRYLKLPVPENPIDTANNLLESPHSDLSPFIKPNHESDLSQS 261
>TAIR|locus:2017829 [details] [associations]
symbol:WRI4 "WRINKLED 4" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IC] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0000981 "sequence-specific DNA binding
RNA polymerase II transcription factor activity" evidence=IPI]
[GO:0045723 "positive regulation of fatty acid biosynthetic
process" evidence=IGI;IMP] [GO:1901959 "positive regulation of
cutin biosynthetic process" evidence=IGI] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0009887 "organ morphogenesis" evidence=ISS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 KO:K09285 HOGENOM:HOG000238389 EMBL:AC010793
UniGene:At.21701 UniGene:At.48398 IPI:IPI00846298
RefSeq:NP_001077849.1 ProteinModelPortal:A8MQS2 SMR:A8MQS2
STRING:A8MQS2 EnsemblPlants:AT1G79700.2 GeneID:844309
KEGG:ath:AT1G79700 OMA:GKLATEE ProtClustDB:CLSN2680813
Genevestigator:A8MQS2 Uniprot:A8MQS2
Length = 313
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 113/169 (66%), Positives = 141/169 (83%)
Query: 104 QRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALK 163
QR+S YRGVTRHRWTGRYEAHLWD + + QT+KGRQVYLG YD+E+ AARAYDLAALK
Sbjct: 48 QRSSPYRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQVYLGAYDEEEAAARAYDLAALK 107
Query: 164 YWGATTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRW 223
YWG T +NFPL +Y+++++EM+ +++E++ +LRRKSSGFSRG S YRGV RHH +GRW
Sbjct: 108 YWGRDTLLNFPLPSYDEDVKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRW 167
Query: 224 QARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDISRY 272
+ARIGRV GNK LYLGT++TQ YDIAAI++RG +AVTNFD+SRY
Sbjct: 168 EARIGRVFGNKYLYLGTYATQEEAAIAYDIAAIEYRGLNAVTNFDVSRY 216
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 33/83 (39%), Positives = 47/83 (56%)
Query: 96 RKSIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAAR 155
RKS F + S+YRGV RH GR+EA + G+ + +YLG Y +++AA
Sbjct: 143 RKS-SGFSRGVSKYRGVARHHHNGRWEARI--------GRVFGNKYLYLGTYATQEEAAI 193
Query: 156 AYDLAALKYWGATTHINFPLSTY 178
AYD+AA++Y G NF +S Y
Sbjct: 194 AYDIAAIEYRGLNAVTNFDVSRY 216
Score = 114 (45.2 bits), Expect = 0.00067, P = 0.00067
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 208 ASVYRGVTRHHQHGRWQARIG--------RVAGNKDLYLGTFSTQXXXXXXYDIAAIKFR 259
+S YRGVTRH GR++A + + + +YLG + + YD+AA+K+
Sbjct: 50 SSPYRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQVYLGAYDEEEAAARAYDLAALKYW 109
Query: 260 GTSAVTNFDISRYD 273
G + NF + YD
Sbjct: 110 GRDTLLNFPLPSYD 123
>TAIR|locus:2005493 [details] [associations]
symbol:AP2 "APETALA 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;TAS]
[GO:0010093 "specification of floral organ identity" evidence=IMP]
[GO:0048316 "seed development" evidence=IMP] [GO:0010073 "meristem
maintenance" evidence=IMP] [GO:0009888 "tissue development"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA;TAS]
[GO:0048481 "ovule development" evidence=IGI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009908 "flower development" evidence=TAS] [GO:0019953 "sexual
reproduction" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048316
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010093 GO:GO:0048481
EMBL:Z99707 EMBL:AL161590 EMBL:U12546 EMBL:AY128328 IPI:IPI00523209
PIR:A85436 RefSeq:NP_001190938.1 RefSeq:NP_195410.1 UniGene:At.4638
ProteinModelPortal:P47927 SMR:P47927 STRING:P47927
EnsemblPlants:AT4G36920.1 EnsemblPlants:AT4G36920.2 GeneID:829845
KEGG:ath:AT4G36920 TAIR:At4g36920 eggNOG:NOG247476
HOGENOM:HOG000033977 InParanoid:P47927 KO:K09284 OMA:SIYDEEL
PhylomeDB:P47927 ProtClustDB:CLSN2915922 Genevestigator:P47927
GermOnline:AT4G36920 GO:GO:0010073 Uniprot:P47927
Length = 432
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 101/203 (49%), Positives = 130/203 (64%)
Query: 85 GKAT----AAKEPV-P-RKSIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRK 138
GKAT A EP P +KS R+SQYRGVT +R TGR+E+H+WD C
Sbjct: 102 GKATNVAAAVVEPAQPLKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWD--C-------- 151
Query: 139 GRQVYLGGYDKEDKAARAYDLAALKYWGATTHINFPLSTYEKELEEMKHMTRQEFVANLR 198
G+QVYLGG+D AARAYD AA+K+ G INF + Y+ +L++M ++T++EFV LR
Sbjct: 152 GKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIDDYDDDLKQMTNLTKEEFVHVLR 211
Query: 199 RKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKF 258
R+S+GF RG+S YRGVT H + GRW+AR+G+ G K +YLG F T+ YD AAIK
Sbjct: 212 RQSTGFPRGSSKYRGVTLH-KCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKC 270
Query: 259 RGTSAVTNFDISRYDVKRICSSS 281
G AVTNFD S YD + SS
Sbjct: 271 NGKDAVTNFDPSIYDEELNAESS 293
>TAIR|locus:2155598 [details] [associations]
symbol:TOE3 "target of early activation tagged (EAT) 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009408
"response to heat" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB020742
HOGENOM:HOG000033977 KO:K09284 EMBL:AK176145 EMBL:BT029206
EMBL:AY088238 IPI:IPI00536061 RefSeq:NP_201519.1 UniGene:At.28821
UniGene:At.28822 ProteinModelPortal:Q9FH95 SMR:Q9FH95 PRIDE:Q9FH95
EnsemblPlants:AT5G67180.1 GeneID:836853 KEGG:ath:AT5G67180
TAIR:At5g67180 eggNOG:NOG326403 InParanoid:Q9FH95 OMA:PDHHEES
PhylomeDB:Q9FH95 ProtClustDB:CLSN2916545 Genevestigator:Q9FH95
Uniprot:Q9FH95
Length = 352
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 90/190 (47%), Positives = 121/190 (63%)
Query: 93 PVPRKSIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDK 152
P +KS R+SQYRGVT +R TGR+E+H+WD C G+QVYLGG+D
Sbjct: 81 PPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTAHA 130
Query: 153 AARAYDLAALKYWGATTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYR 212
AARAYD AA+K+ G INF + Y +L++M ++T++EF+ LRR+S+GF RG+S YR
Sbjct: 131 AARAYDRAAIKFRGVDADINFDIEDYLDDLKQMGNLTKEEFMHVLRRQSTGFPRGSSKYR 190
Query: 213 GVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDISRY 272
GVT H + GRW++R+G+ K +YLG F T+ YD AAIK G AVTNFD Y
Sbjct: 191 GVTLH-KCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPKVY 249
Query: 273 DVKRICSSST 282
+ + SS T
Sbjct: 250 EEEEDLSSET 259
Score = 143 (55.4 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 44/114 (38%), Positives = 60/114 (52%)
Query: 78 DNRKRPMGKATAAK-EPVPRKSIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQT 136
D+ K+ MG T + V R+ F + +S+YRGVT H+ GR+E+ L GQ
Sbjct: 158 DDLKQ-MGNLTKEEFMHVLRRQSTGFPRGSSKYRGVTLHK-CGRWESRL--------GQF 207
Query: 137 RKGRQVYLGGYDKEDKAARAYDLAALKYWGATTHINFPLSTYEKELEEMKHMTR 190
+ VYLG +D E +AARAYD AA+K G NF YE+E + TR
Sbjct: 208 LNKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPKVYEEEEDLSSETTR 261
>TAIR|locus:2082732 [details] [associations]
symbol:SMZ "SCHLAFMUTZE" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0009658 "chloroplast
organization" evidence=IMP] [GO:0007275 "multicellular organismal
development" evidence=ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL049655 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009658
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AY576275 EMBL:AY560886
EMBL:BT026352 IPI:IPI00547287 IPI:IPI00846149 PIR:T06721
RefSeq:NP_001078290.1 RefSeq:NP_191059.2 UniGene:At.50279
ProteinModelPortal:Q6PV68 SMR:Q6PV68 STRING:Q6PV68
EnsemblPlants:AT3G54990.1 GeneID:824664 KEGG:ath:AT3G54990
TAIR:At3g54990 eggNOG:NOG270704 HOGENOM:HOG000293136
InParanoid:Q6PV68 OMA:DADINFV PhylomeDB:Q6PV68
ProtClustDB:CLSN2681587 ArrayExpress:Q6PV68 Genevestigator:Q6PV68
Uniprot:Q6PV68
Length = 346
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 54/110 (49%), Positives = 76/110 (69%)
Query: 105 RTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKY 164
R+SQYRGVT +R TGR+E+H+WD C G+QVYLGG+D AARAYD AA+K+
Sbjct: 119 RSSQYRGVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTAYAAARAYDRAAIKF 168
Query: 165 WGATTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGV 214
G INF + Y ++++MK++ + EFV LRR+S+ F RG+S Y+G+
Sbjct: 169 RGLDADINFVVDDYRHDIDKMKNLNKVEFVQTLRRESASFGRGSSKYKGL 218
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 42/114 (36%), Positives = 59/114 (51%)
Query: 167 ATTHINFPLS-TYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQA 225
A +I F + ++ L ++ T Q+ V RR SR +S YRGVT + + GRW++
Sbjct: 82 ARRNIEFSVEDSHWLNLSSLQRNT-QKMVKKSRRGPR--SR-SSQYRGVTFYRRTGRWES 137
Query: 226 RIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNF--DISRYDVKRI 277
I K +YLG F T YD AAIKFRG A NF D R+D+ ++
Sbjct: 138 HIWDCG--KQVYLGGFDTAYAAARAYDRAAIKFRGLDADINFVVDDYRHDIDKM 189
>TAIR|locus:2056048 [details] [associations]
symbol:SNZ "SCHNARCHZAPFEN" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=ISS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PROSITE:PS51032
SMART:SM00380 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC004697 Gene3D:3.30.730.10 SUPFAM:SSF54171
HOGENOM:HOG000293136 ProtClustDB:CLSN2681587 EMBL:AY576276
EMBL:AY062578 EMBL:AY093386 IPI:IPI00534560 IPI:IPI00866782
PIR:T02577 RefSeq:NP_850313.2 UniGene:At.27296
ProteinModelPortal:Q6PV67 SMR:Q6PV67 IntAct:Q6PV67 PaxDb:Q6PV67
PRIDE:Q6PV67 EnsemblPlants:AT2G39250.1 GeneID:818510
KEGG:ath:AT2G39250 TAIR:At2g39250 eggNOG:NOG298400
InParanoid:Q6PV67 OMA:THNEDED PhylomeDB:Q6PV67
Genevestigator:Q6PV67 Uniprot:Q6PV67
Length = 325
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 52/116 (44%), Positives = 78/116 (67%)
Query: 105 RTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKY 164
R+S YRGVT +R TGR+E+H+WD C G+QVYLGG+D AARAYD AA+++
Sbjct: 105 RSSHYRGVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTAYTAARAYDRAAIRF 154
Query: 165 WGATTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQH 220
G INF + Y++++E+MK+++++EFV +LRR S+ +RG S Y+ + H
Sbjct: 155 RGLQADINFIVDDYKQDIEKMKNLSKEEFVQSLRRASASLARGGSKYKNTHMRNDH 210
Score = 138 (53.6 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 181 ELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGT 240
+L M+ +QE + ++ G +S YRGVT + + GRW++ I K +YLG
Sbjct: 80 DLSSMQR-NKQETLVMKKKSRRGPRSRSSHYRGVTFYRRTGRWESHIWDCG--KQVYLGG 136
Query: 241 FSTQXXXXXXYDIAAIKFRGTSAVTNFDISRY--DVKRI 277
F T YD AAI+FRG A NF + Y D++++
Sbjct: 137 FDTAYTAARAYDRAAIRFRGLQADINFIVDDYKQDIEKM 175
Score = 37 (18.1 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 392 GTKYENCDDDNGGNHSTNNRLVN 414
G+KY+N N H NR +N
Sbjct: 198 GSKYKNTHMRNDHIHLFQNRGLN 220
>TAIR|locus:2061956 [details] [associations]
symbol:ERF71 "ethylene response factor 71" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0034059 "response to anoxia"
evidence=IGI] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC002535 GO:GO:0034059 HOGENOM:HOG000237624
EMBL:AY074645 IPI:IPI00523940 PIR:T00432 RefSeq:NP_182274.1
UniGene:At.37019 ProteinModelPortal:O22259 SMR:O22259
EnsemblPlants:AT2G47520.1 GeneID:819365 KEGG:ath:AT2G47520
TAIR:At2g47520 eggNOG:NOG247457 InParanoid:O22259 OMA:MALEDYM
PhylomeDB:O22259 ProtClustDB:CLSN2913160 Genevestigator:O22259
Uniprot:O22259
Length = 171
Score = 133 (51.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 35/122 (28%), Positives = 63/122 (51%)
Query: 77 ADNRKRPMGKATAAKEPVP---RKSIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKE 133
+++ +G ++ K+ P + D +R + YRG+ + W G++ A + D S
Sbjct: 15 SESEPSQLGSVSSRKKRKPVSVSEERDGKRERKNLYRGIRQRPW-GKWAAEIRDPS---- 69
Query: 134 GQTRKGRQVYLGGYDKEDKAARAYDLAALKYWGATTHINFPLSTYEKELEEMKHMTRQEF 193
KG +V+LG + D+AARAYD+AA+K G +NFP + E+E + + E
Sbjct: 70 ----KGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPNTQVEEEADTKPGGNQNEL 125
Query: 194 VA 195
++
Sbjct: 126 IS 127
Score = 120 (47.3 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 33/100 (33%), Positives = 50/100 (50%)
Query: 209 SVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFD 268
++YRG+ R G+W A I + ++LGTF T YD+AAIK RG A NF
Sbjct: 48 NLYRGI-RQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFP 106
Query: 269 ISRY----DVKRICSSSTLIASDLAKRSPKDSAPLVLEDY 304
++ D K + + LI+ + + +D + LEDY
Sbjct: 107 NTQVEEEADTKPGGNQNELISENQVESLSEDL--MALEDY 144
>TAIR|locus:2024249 [details] [associations]
symbol:ERF10 "ERF domain protein 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009873 "ethylene mediated signaling pathway"
evidence=TAS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 EMBL:AC003027
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
EMBL:AB047649 EMBL:AY560879 IPI:IPI00526738 PIR:E86168
RefSeq:NP_171876.1 UniGene:At.50567 ProteinModelPortal:Q9ZWA2
SMR:Q9ZWA2 STRING:Q9ZWA2 EnsemblPlants:AT1G03800.1 GeneID:839173
KEGG:ath:AT1G03800 TAIR:At1g03800 eggNOG:NOG291029 OMA:QTAVEEP
PhylomeDB:Q9ZWA2 ProtClustDB:CLSN2914355 Genevestigator:Q9ZWA2
Uniprot:Q9ZWA2
Length = 245
Score = 145 (56.1 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 46/134 (34%), Positives = 71/134 (52%)
Query: 180 KELEEMKHMTRQEFVANLRRKSSGFSRGASV-YRGVTRHHQHGRWQARIGRVAGNKDLYL 238
KE+ + K + +++ V + G + V YRGV R GR+ A I K ++L
Sbjct: 22 KEVSD-KGVKKRKNVTKALAVNDGGEKSKEVRYRGV-RRRPWGRYAAEIRDPVKKKRVWL 79
Query: 239 GTFSTQXXXXXXYDIAAIKFRGTSAVTNFD-ISRYDVKRICSSSTLIASDLAKRSPKDSA 297
G+F+T YD AAI+FRG+ A TNF I Y + SS+T + ++L++ +A
Sbjct: 80 GSFNTGEEAARAYDSAAIRFRGSKATTNFPLIGYYGI----SSATPVNNNLSETVSDGNA 135
Query: 298 --PLVLEDYNSCAS 309
PLV +D N+ AS
Sbjct: 136 NLPLVGDDGNALAS 149
Score = 128 (50.1 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 39/128 (30%), Positives = 68/128 (53%)
Query: 54 TSAEQNGPIITTAITPLQVQGVAADNRKRPMGKATAAKEPVPRK-SIDSFGQRTSQ--YR 110
T+ ++N +TTA+ V+ + K K ++ V + +++ G+++ + YR
Sbjct: 2 TTEKEN---VTTAVA---VKD-GGEKSKEVSDKGVKKRKNVTKALAVNDGGEKSKEVRYR 54
Query: 111 GVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKYWGATTH 170
GV R W GRY A + D K ++V+LG ++ ++AARAYD AA+++ G+
Sbjct: 55 GVRRRPW-GRYAAEIRDPV--------KKKRVWLGSFNTGEEAARAYDSAAIRFRGSKAT 105
Query: 171 INFPLSTY 178
NFPL Y
Sbjct: 106 TNFPLIGY 113
>TAIR|locus:2015061 [details] [associations]
symbol:AT1G22190 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006970 "response to osmotic stress" evidence=IEP] [GO:0009409
"response to cold" evidence=IEP] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0009409 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0006970 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 HOGENOM:HOG000239817 EMBL:AC073942 EMBL:BT000907
IPI:IPI00529569 PIR:E86354 RefSeq:NP_173638.1 UniGene:At.25524
UniGene:At.26676 UniGene:At.70046 ProteinModelPortal:Q9LM15
SMR:Q9LM15 MINT:MINT-7262777 STRING:Q9LM15 PaxDb:Q9LM15
PRIDE:Q9LM15 EnsemblPlants:AT1G22190.1 GeneID:838824
KEGG:ath:AT1G22190 TAIR:At1g22190 eggNOG:NOG261785
InParanoid:Q9LM15 OMA:QAICATI PhylomeDB:Q9LM15
ProtClustDB:CLSN2914396 Genevestigator:Q9LM15 Uniprot:Q9LM15
Length = 261
Score = 125 (49.1 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 37/110 (33%), Positives = 55/110 (50%)
Query: 174 PLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGN 233
P+S Y +L H + V+ +++ + ++ +YRGV + H G+W A I R+ N
Sbjct: 48 PIS-YGSDLHSFSHHLSPKPVS-MKQTGTSAAKPTKLYRGVRQRHW-GKWVAEI-RLPRN 103
Query: 234 KD-LYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNF-DISRYDVKRICSSS 281
+ L+LGTF T YD AA K RG A NF D+ D + SS
Sbjct: 104 RTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPDLRHNDEYQPLQSS 153
Score = 96 (38.9 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 30/96 (31%), Positives = 47/96 (48%)
Query: 92 EPVPRKSID-SFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKE 150
+PV K S + T YRGV + W G++ A + +TR ++LG +D
Sbjct: 65 KPVSMKQTGTSAAKPTKLYRGVRQRHW-GKWVAEIR----LPRNRTR----LWLGTFDTA 115
Query: 151 DKAARAYDLAALKYWGATTHINFPLSTYEKELEEMK 186
++AA AYD AA K G +NFP + E + ++
Sbjct: 116 EEAALAYDKAAYKLRGDFARLNFPDLRHNDEYQPLQ 151
Score = 55 (24.4 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 279 SSSTLIASDLAKRSPKD------SAPLVLEDYNSCASSTSPQPLA-ISNGEASDELVDMV 331
SSS +S +A + P++ S+PL+ E Y S SS+ PL+ ++ G+ +E +
Sbjct: 179 SSSRKRSSTVAVKLPEEDYSSAGSSPLLTESYGSGGSSS---PLSELTFGDTEEE-IQPP 234
Query: 332 WSANS 336
W+ N+
Sbjct: 235 WNENA 239
>TAIR|locus:2176511 [details] [associations]
symbol:AT5G43410 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB025638 HOGENOM:HOG000237624
EMBL:AY560864 EMBL:DQ447034 EMBL:DQ653344 IPI:IPI00538759
RefSeq:NP_199154.1 UniGene:At.50627 ProteinModelPortal:Q9LSX0
SMR:Q9LSX0 EnsemblPlants:AT5G43410.1 GeneID:834360
KEGG:ath:AT5G43410 TAIR:At5g43410 eggNOG:NOG244602
InParanoid:Q9LSX0 OMA:HEYNMGS PhylomeDB:Q9LSX0
ProtClustDB:CLSN2681785 Genevestigator:Q9LSX0 Uniprot:Q9LSX0
Length = 131
Score = 123 (48.4 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 103 GQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAAL 162
G +YRGV R W G+Y A + D+ RK G+ +V+LG +D ++AARAYD AA
Sbjct: 9 GAEHGKYRGVRRRPW-GKYAAEIRDS--RKHGE-----RVWLGTFDTAEEAARAYDQAAY 60
Query: 163 KYWGATTHINFP 174
G +NFP
Sbjct: 61 SMRGQAAILNFP 72
Score = 112 (44.5 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 36/95 (37%), Positives = 47/95 (49%)
Query: 211 YRGVTRHHQHGRWQARI--GRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFD 268
YRGV R G++ A I R G + ++LGTF T YD AA RG +A+ NF
Sbjct: 15 YRGV-RRRPWGKYAAEIRDSRKHGER-VWLGTFDTAEEAARAYDQAAYSMRGQAAILNFP 72
Query: 269 ISRYDVKRICSSSTLIA-SDLAKRSPKDSAPLVLE 302
Y++ SSST +A S A S S+ V E
Sbjct: 73 -HEYNMGSGVSSSTAMAGSSSASASASSSSRQVFE 106
>TAIR|locus:2042496 [details] [associations]
symbol:ERF15 "ethylene-responsive element binding factor
15" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0010200 "response to chitin" evidence=IEP]
[GO:0009873 "ethylene mediated signaling pathway" evidence=RCA;TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 GO:GO:0009507
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 EMBL:AC006593 HOGENOM:HOG000237624
EMBL:AY070443 EMBL:AY096563 IPI:IPI00528983 PIR:B84718
RefSeq:NP_850162.1 UniGene:At.28356 ProteinModelPortal:Q8VYM0
SMR:Q8VYM0 EnsemblPlants:AT2G31230.1 GeneID:817680
KEGG:ath:AT2G31230 TAIR:At2g31230 eggNOG:NOG236239
InParanoid:Q8VYM0 OMA:ESPEMMI PhylomeDB:Q8VYM0
ProtClustDB:CLSN2682286 Genevestigator:Q8VYM0 GermOnline:AT2G31230
Uniprot:Q8VYM0
Length = 243
Score = 133 (51.9 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 34/97 (35%), Positives = 55/97 (56%)
Query: 109 YRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKYWGAT 168
YRGV + W G++ A + D+ TR G +V+LG +DK ++AA AYD AA G+
Sbjct: 86 YRGVRKRPW-GKFAAEIRDS-------TRNGIRVWLGTFDKAEEAALAYDQAAFATKGSL 137
Query: 169 THINFPLSTYEKELEEMKHMTRQEF---VANLRRKSS 202
+NFP+ + L++M+++ + V L+RK S
Sbjct: 138 ATLNFPVEVVRESLKKMENVNLHDGGSPVMALKRKHS 174
Score = 42 (19.8 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 15/52 (28%), Positives = 20/52 (38%)
Query: 334 ANSXXXXXXXXXXXXETSLGASGSRNSSNPESPKCPVGLTSEFGMSGAEYNE 385
++S +S +S SR+SS K G F GAEY E
Sbjct: 185 SSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFEDLGAEYLE 236
>TAIR|locus:2018289 [details] [associations]
symbol:ERF14 "Ethylene-responsive element binding factor
14" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009873
"ethylene mediated signaling pathway" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AC000104 HOGENOM:HOG000237624
ProtClustDB:CLSN2681785 EMBL:AY560880 EMBL:BT026421 IPI:IPI00531659
PIR:D86175 RefSeq:NP_171932.1 UniGene:At.50643
ProteinModelPortal:P93822 SMR:P93822 STRING:P93822 PRIDE:P93822
EnsemblPlants:AT1G04370.1 GeneID:839539 KEGG:ath:AT1G04370
TAIR:At1g04370 eggNOG:NOG309663 InParanoid:P93822 OMA:NKTHNIN
PhylomeDB:P93822 Genevestigator:P93822 Uniprot:P93822
Length = 133
Score = 122 (48.0 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 103 GQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAAL 162
G +YRGV R W G+Y A + D+ RK G+ +V+LG +D + AARAYD AA
Sbjct: 14 GAEQGKYRGVRRRPW-GKYAAEIRDS--RKHGE-----RVWLGTFDTAEDAARAYDRAAY 65
Query: 163 KYWGATTHINFP 174
G +NFP
Sbjct: 66 SMRGKAAILNFP 77
Score = 97 (39.2 bits), Expect = 0.00030, P = 0.00030
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 200 KSSGFSRGASV---YRGVTRHHQHGRWQARI--GRVAGNKDLYLGTFSTQXXXXXXYDIA 254
+SSG G + YRGV R G++ A I R G + ++LGTF T YD A
Sbjct: 6 RSSGSGGGGAEQGKYRGV-RRRPWGKYAAEIRDSRKHGER-VWLGTFDTAEDAARAYDRA 63
Query: 255 AIKFRGTSAVTNFDISRYDVKRICSSSTLIASDLAKR 291
A RG +A+ NF Y++ SS+ +S +++
Sbjct: 64 AYSMRGKAAILNFP-HEYNMGTGSSSTAANSSSSSQQ 99
>TAIR|locus:2086203 [details] [associations]
symbol:ESE1 "ethylene and salt inducible 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009873 "ethylene mediated
signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB025608
HOGENOM:HOG000237624 EMBL:AY974196 EMBL:AY560847 EMBL:BT028890
IPI:IPI00539423 RefSeq:NP_188963.2 UniGene:At.50677
ProteinModelPortal:Q9LTC6 SMR:Q9LTC6 EnsemblPlants:AT3G23220.1
GeneID:821900 KEGG:ath:AT3G23220 TAIR:At3g23220 eggNOG:NOG265349
InParanoid:Q9LTC6 OMA:NFPAEAR PhylomeDB:Q9LTC6
ProtClustDB:CLSN2920270 Genevestigator:Q9LTC6 Uniprot:Q9LTC6
Length = 139
Score = 121 (47.7 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 35/109 (32%), Positives = 58/109 (53%)
Query: 99 IDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYD 158
I+S+ +YRGV + W G+Y A + D++ R G +V+LG ++ + AARAYD
Sbjct: 4 IESYNTNEMKYRGVRKRPW-GKYAAEIRDSA-------RHGARVWLGTFNTAEDAARAYD 55
Query: 159 LAALKYWGATTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRG 207
AA G +NFP Y+ +++ + + + VA+ SSG+ G
Sbjct: 56 RAAFGMRGQRAILNFP-HEYQM-MKDGPNGSHENAVAS---SSSGYRGG 99
>TAIR|locus:2037698 [details] [associations]
symbol:SHN1 "SHINE 1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0010166 "wax metabolic process" evidence=IMP]
[GO:0010143 "cutin biosynthetic process" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IPI] [GO:0009873 "ethylene
mediated signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009873 GO:GO:0009414 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC007591 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 GO:GO:0010143 HOGENOM:HOG000237624
ProtClustDB:CLSN2692546 EMBL:AY378101 EMBL:AK117941 EMBL:BT005220
EMBL:AY085720 IPI:IPI00534091 PIR:B86288 RefSeq:NP_172988.1
UniGene:At.11422 ProteinModelPortal:Q9XI33 SMR:Q9XI33 STRING:Q9XI33
EnsemblPlants:AT1G15360.1 GeneID:838105 KEGG:ath:AT1G15360
TAIR:At1g15360 eggNOG:NOG290838 InParanoid:Q9XI33 OMA:DTASSHI
Genevestigator:Q9XI33 GO:GO:0010166 Uniprot:Q9XI33
Length = 199
Score = 132 (51.5 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 46/175 (26%), Positives = 71/175 (40%)
Query: 211 YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDIS 270
+RGV + H G W A I + ++LGTF T YD AA+ G +A TNF ++
Sbjct: 7 FRGVRQRHW-GSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLN 65
Query: 271 RYDVKRICSSSTLIASDLAKRSPKDSAPL--VLE-DYNSCASSTSPQPLAISNGEASDEL 327
+ T I++ S S+ L +L C S SP + AS +
Sbjct: 66 NNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSHI 125
Query: 328 VDMVWSANSXXXXXXXXXXXXETSLG-ASGSRNSSNPESPKCPVGLTSEFGMSGA 381
VW + E LG AS S+ +++ S + T+E + G+
Sbjct: 126 G--VWQKRAGSKSDSSWVMTVE--LGPASSSQETTSKASQDAILAPTTEVEIGGS 176
>TAIR|locus:2086223 [details] [associations]
symbol:ERF1 "ethylene response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0006952
"defense response" evidence=IMP] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=TAS] [GO:0009873 "ethylene
mediated signaling pathway" evidence=IGI;TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006952 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB025608
GO:GO:0009867 HOGENOM:HOG000237624 EMBL:AF076277 EMBL:AF076278
EMBL:AF428390 EMBL:AY133629 EMBL:AY086078 IPI:IPI00537111
RefSeq:NP_188965.1 UniGene:At.6341 UniGene:At.74125
ProteinModelPortal:Q8LDC8 SMR:Q8LDC8 PaxDb:Q8LDC8 PRIDE:Q8LDC8
EnsemblPlants:AT3G23240.1 GeneID:821902 KEGG:ath:AT3G23240
GeneFarm:4728 TAIR:At3g23240 eggNOG:NOG331104 InParanoid:Q8LDC8
KO:K14516 OMA:NDSEEMF PhylomeDB:Q8LDC8 ProtClustDB:CLSN2914712
Genevestigator:Q8LDC8 GermOnline:AT3G23240 Uniprot:Q8LDC8
Length = 218
Score = 134 (52.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 38/113 (33%), Positives = 59/113 (52%)
Query: 92 EPVPRKSIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKED 151
+ +P KS+ S S YRGV R W G++ A + D+ TR G +V+LG ++ +
Sbjct: 66 QDLPIKSVSSRKSEKS-YRGVRRRPW-GKFAAEIRDS-------TRNGIRVWLGTFESAE 116
Query: 152 KAARAYDLAALKYWGATTHINFPLSTYEKELEEMKHMTRQEF--VANLRRKSS 202
+AA AYD AA G++ +NF ++ L E+K+ V L+RK S
Sbjct: 117 EAALAYDQAAFSMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHS 169
>TAIR|locus:2151576 [details] [associations]
symbol:AT5G61590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IEP] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB012239 HOGENOM:HOG000272710
EMBL:AY045968 EMBL:AY079321 EMBL:AY085939 IPI:IPI00538118
RefSeq:NP_200967.1 UniGene:At.24138 ProteinModelPortal:Q9FKG2
SMR:Q9FKG2 STRING:Q9FKG2 EnsemblPlants:AT5G61590.1 GeneID:836280
KEGG:ath:AT5G61590 TAIR:At5g61590 eggNOG:NOG268094
InParanoid:Q9FKG2 OMA:TSPEVET PhylomeDB:Q9FKG2
ProtClustDB:CLSN2686928 Genevestigator:Q9FKG2 Uniprot:Q9FKG2
Length = 201
Score = 131 (51.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/145 (27%), Positives = 66/145 (45%)
Query: 52 NPT-SAEQNGPIITTAITPLQVQGVAADNRKRPMGKATAAKEPVP-RKSIDSFGQRTSQY 109
NP E + P++ ++ + A++ + E V RK F + T Y
Sbjct: 49 NPVPKLEPSSPVLDPDSYVQEILQMEAESSSSSSTTTSPEVETVSNRKKTKRF-EETRHY 107
Query: 110 RGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKYWGATT 169
RGV R W G++ A + D + +KG +++LG ++ + AARAYD AA K G
Sbjct: 108 RGVRRRPW-GKFAAEIRDPA-------KKGSRIWLGTFESDIDAARAYDYAAFKLRGRKA 159
Query: 170 HINFPLST--YEKELEEMKHMTRQE 192
+NFPL Y+ + + R +
Sbjct: 160 VLNFPLDAGKYDAPVNSCRKRRRTD 184
Score = 113 (44.8 bits), Expect = 0.00026, P = 0.00026
Identities = 34/86 (39%), Positives = 45/86 (52%)
Query: 192 EFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVA--GNKDLYLGTFSTQXXXXX 249
E V+N R+K+ F YRGV R G++ A I A G++ ++LGTF +
Sbjct: 90 ETVSN-RKKTKRFEETRH-YRGV-RRRPWGKFAAEIRDPAKKGSR-IWLGTFESDIDAAR 145
Query: 250 XYDIAAIKFRGTSAVTNF--DISRYD 273
YD AA K RG AV NF D +YD
Sbjct: 146 AYDYAAFKLRGRKAVLNFPLDAGKYD 171
>TAIR|locus:2038500 [details] [associations]
symbol:ORA59 "octadecanoid-responsive Arabidopsis AP2/ERF
59" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009723 "response to ethylene
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0009861 "jasmonic acid and
ethylene-dependent systemic resistance" evidence=IMP] [GO:0009873
"ethylene mediated signaling pathway" evidence=RCA;TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009753 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC025290 GO:GO:0009861
HOGENOM:HOG000237624 ProtClustDB:CLSN2682286 EMBL:AK228085
EMBL:BT011001 EMBL:BT014958 IPI:IPI00523269 PIR:B86197
RefSeq:NP_172106.1 UniGene:At.42354 ProteinModelPortal:Q9LND1
SMR:Q9LND1 STRING:Q9LND1 EnsemblPlants:AT1G06160.1 GeneID:837125
KEGG:ath:AT1G06160 TAIR:At1g06160 eggNOG:NOG324429
InParanoid:Q9LND1 OMA:FAFESSI PhylomeDB:Q9LND1
Genevestigator:Q9LND1 Uniprot:Q9LND1
Length = 244
Score = 133 (51.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 104 QRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALK 163
+ YRGV + W G++ A + D+ TRKG +V+LG +D + AA AYD AA
Sbjct: 77 EEEKSYRGVRKRPW-GKFAAEIRDS-------TRKGIRVWLGTFDTAEAAALAYDQAAFA 128
Query: 164 YWGATTHINFPLSTYEKELEEMKHMTRQEF---VANLRRKSS 202
G+ +NFP E+ L +M+++ + V L+RK S
Sbjct: 129 LKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHS 170
>TAIR|locus:2086213 [details] [associations]
symbol:TDR1 "Transcriptional Regulator of Defense
Response 1" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS;TAS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0009873 "ethylene
mediated signaling pathway" evidence=RCA;TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 HSSP:O80337
EMBL:AB025608 HOGENOM:HOG000237624 EMBL:AJ580377 IPI:IPI00538070
RefSeq:NP_188964.2 UniGene:At.37741 ProteinModelPortal:Q9LTC5
SMR:Q9LTC5 STRING:Q9LTC5 EnsemblPlants:AT3G23230.1 GeneID:821901
KEGG:ath:AT3G23230 TAIR:At3g23230 eggNOG:NOG239208
InParanoid:Q9LTC5 OMA:DKQARFR PhylomeDB:Q9LTC5
ProtClustDB:CLSN2918542 Genevestigator:Q9LTC5 Uniprot:Q9LTC5
Length = 139
Score = 116 (45.9 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 33/108 (30%), Positives = 57/108 (52%)
Query: 105 RTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKY 164
+ +++RGV R W G++ A + D S R G +++LG ++ ++AARAYD AA
Sbjct: 16 KQARFRGVRRRPW-GKFAAEIRDPS-------RNGARLWLGTFETAEEAARAYDRAAFNL 67
Query: 165 WGATTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYR 212
G +NFP + Y +++ + R + ++ SSG S +V R
Sbjct: 68 RGHLAILNFP-NEYYPRMDD--YSLRPPYASSSSSSSSG-STSTNVSR 111
>TAIR|locus:2034295 [details] [associations]
symbol:AT1G36060 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006228 EMBL:AC021666
EMBL:BT005758 EMBL:BT006078 EMBL:AK228415 IPI:IPI00549083
PIR:E86482 RefSeq:NP_564468.1 UniGene:At.39425
ProteinModelPortal:Q9SKW5 SMR:Q9SKW5 STRING:Q9SKW5
EnsemblPlants:AT1G36060.1 GeneID:840510 KEGG:ath:AT1G36060
TAIR:At1g36060 eggNOG:NOG329700 HOGENOM:HOG000239817
InParanoid:Q9SKW5 OMA:YKSASTS PhylomeDB:Q9SKW5
ProtClustDB:CLSN2914986 Genevestigator:Q9SKW5 Uniprot:Q9SKW5
Length = 314
Score = 134 (52.2 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 35/74 (47%), Positives = 42/74 (56%)
Query: 201 SSG-FSRGASVYRGVTRHHQHGRWQARIGRVAGNKD-LYLGTFSTQXXXXXXYDIAAIKF 258
SSG S+ A +YRGV + H G+W A I R+ N+ L+LGTF T YD AA K
Sbjct: 132 SSGSVSKPAKLYRGVRQRHW-GKWVAEI-RLPRNRTRLWLGTFDTAEEAALAYDRAAFKL 189
Query: 259 RGTSAVTNFDISRY 272
RG SA NF RY
Sbjct: 190 RGDSARLNFPALRY 203
>TAIR|locus:2194007 [details] [associations]
symbol:ERF73 "ethylene response factor 73" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;IDA] [GO:0034059 "response to
anoxia" evidence=IGI] [GO:0009873 "ethylene mediated signaling
pathway" evidence=IMP;TAS] [GO:0071369 "cellular response to
ethylene stimulus" evidence=IMP] [GO:0071456 "cellular response to
hypoxia" evidence=IEP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0071456 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0034059 UniGene:At.35111 IPI:IPI00541631
RefSeq:NP_001077812.1 UniGene:At.68119 ProteinModelPortal:F4IDA7
SMR:F4IDA7 EnsemblPlants:AT1G72360.2 GeneID:843568
KEGG:ath:AT1G72360 OMA:KKHEPND Uniprot:F4IDA7
Length = 262
Score = 118 (46.6 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 31/93 (33%), Positives = 51/93 (54%)
Query: 100 DSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDL 159
D +++S+Y+G+ R W GR+ A + D KG +V+LG ++ ++AARAYDL
Sbjct: 67 DGKKKQSSRYKGIRRRPW-GRWAAEIRDPI--------KGVRVWLGTFNTAEEAARAYDL 117
Query: 160 AALKYWGATTHINFPLSTYEKELEEMKHMTRQE 192
A + GA +NFP + K + K + + E
Sbjct: 118 EAKRIRGAKAKLNFPNESSGKRKAKAKTVQQVE 150
Score = 104 (41.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 31/107 (28%), Positives = 47/107 (43%)
Query: 201 SSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRG 260
S G + +S Y+G+ R GRW A I ++LGTF+T YD+ A + RG
Sbjct: 66 SDGKKKQSSRYKGI-RRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRG 124
Query: 261 TSAVTNFDISRYDVKRICSSSTLIASDLAKRSPKDSAPLVLEDYNSC 307
A NF + KR + T+ + + D A + +SC
Sbjct: 125 AKAKLNFP-NESSGKRKAKAKTVQQVEENHEADLDVAVVSSAPSSSC 170
Score = 52 (23.4 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 20/87 (22%), Positives = 35/87 (40%)
Query: 316 LAISNGEASDELVDMVWSANSXXXXXXXXXXXXETSLGASGSRNSSNP--ESPKCPVGLT 373
+A+ + S +D +W N+ + +G + ++ N E+ L
Sbjct: 159 VAVVSSAPSSSCLDFLWEENNPDTLLIDTQWLEDIIMGDANKKHEPNDSEEANNVDASLL 218
Query: 374 SEFGMSGAEYNEGYFSS-PGTKYENCD 399
SE ++ E YFS P T+ NCD
Sbjct: 219 SEELLAFENQTE-YFSQMPFTE-GNCD 243
>TAIR|locus:2176187 [details] [associations]
symbol:AT5G51190 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009612 "response to mechanical stimulus"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 HSSP:O80337 EMBL:AB023044 HOGENOM:HOG000272710
EMBL:AY072345 EMBL:AY114590 EMBL:AY086290 IPI:IPI00545838
RefSeq:NP_568755.1 UniGene:At.19728 ProteinModelPortal:Q8VY90
SMR:Q8VY90 STRING:Q8VY90 PaxDb:Q8VY90 EnsemblPlants:AT5G51190.1
GeneID:835193 KEGG:ath:AT5G51190 TAIR:At5g51190 eggNOG:NOG301109
InParanoid:Q8VY90 OMA:PLEAGKH PhylomeDB:Q8VY90
ProtClustDB:CLSN2917752 Genevestigator:Q8VY90 Uniprot:Q8VY90
Length = 221
Score = 127 (49.8 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 39/102 (38%), Positives = 52/102 (50%)
Query: 80 RKRPMGKATAAKEPVPRKSIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKG 139
RK P+ AT A P + QR YRGV R W G+Y A + D + +KG
Sbjct: 48 RKPPL--ATIAV-PTTAPVVQENDQR--HYRGVRRRPW-GKYAAEIRDPN-------KKG 94
Query: 140 RQVYLGGYDKEDKAARAYDLAALKYWGATTHINFPLSTYEKE 181
+V+LG +D +AAR YD AA K G+ +NFPL + E
Sbjct: 95 VRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLEAGKHE 136
>TAIR|locus:2090975 [details] [associations]
symbol:RAP2.2 "related to AP2 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0001666 "response to hypoxia"
evidence=IMP] [GO:0010468 "regulation of gene expression"
evidence=IEP] [GO:0006487 "protein N-linked glycosylation"
evidence=RCA] [GO:0046685 "response to arsenic-containing
substance" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0001666 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AB022220
HOGENOM:HOG000237624 ProtClustDB:CLSN2682146 EMBL:AY054539
EMBL:BT000374 EMBL:AY085580 EMBL:AF003095 IPI:IPI00519633
IPI:IPI00544839 RefSeq:NP_566482.1 RefSeq:NP_850582.1
UniGene:At.25146 ProteinModelPortal:Q9LUM4 SMR:Q9LUM4 STRING:Q9LUM4
EnsemblPlants:AT3G14230.1 GeneID:820643 KEGG:ath:AT3G14230
TAIR:At3g14230 eggNOG:NOG250271 InParanoid:Q9LUM4 OMA:SAFDCED
PhylomeDB:Q9LUM4 Genevestigator:Q9LUM4 Uniprot:Q9LUM4
Length = 379
Score = 125 (49.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 38/116 (32%), Positives = 55/116 (47%)
Query: 61 PIITTAITPLQVQGVAADNRKRPMGKATAAK--EPVPRKSIDSFGQRTSQYRGVTRHRWT 118
P + TA T V +G A A K E + S +R +QYRG+ + W
Sbjct: 79 PFVFTATTK-PVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPW- 136
Query: 119 GRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKYWGATTHINFP 174
G++ A + D RKG + +LG +D ++AARAYD AA + G +NFP
Sbjct: 137 GKWAAEIRD--------PRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFP 184
Score = 46 (21.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 371 GLTSEFGMSGAEYNEGY--FSSP-GTKYENCDDDNGGNHSTNNRLVNLGLVHH 420
GLT+ F G N GY FSS G+ +C + +H ++ LV++
Sbjct: 255 GLTNSFDAGG---NNGYQYFSSDQGSNSFDCSEFGWSDHGPKTPEISSMLVNN 304
Score = 42 (19.8 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 20/81 (24%), Positives = 32/81 (39%)
Query: 286 SDLAKRSPKDSAPLVLEDYNSCASSTSPQPLAISNGEASDELVDMVWSANSXXXXXXXXX 345
SD ++P+ S+ LV + S T+ N + SD+L M + N+
Sbjct: 288 SDHGPKTPEISSMLVNNNEASFVEETNAAKKLKPNSDESDDL--MAYLDNALWDTPLEV- 344
Query: 346 XXXETSLGASGSRNSSNPESP 366
E LGA + E+P
Sbjct: 345 ---EAMLGADAGAVTQEEENP 362
>TAIR|locus:2018635 [details] [associations]
symbol:RAP2.6 "related to AP2 6" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009611
"response to wounding" evidence=IEP;RCA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0009409 "response to cold"
evidence=IEP] [GO:0009651 "response to salt stress"
evidence=IEP;IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP;RCA] [GO:0034605 "cellular response to heat"
evidence=IEP] [GO:0009658 "chloroplast organization" evidence=IMP]
[GO:0009620 "response to fungus" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0045893
GO:GO:0034605 GO:GO:0009753 GO:GO:0009611 GO:GO:0009873
GO:GO:0003677 GO:GO:0009651 GO:GO:0009409 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 GO:GO:0009658 GO:GO:0009751 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 EMBL:AC005687
EMBL:AY062847 EMBL:AY114582 EMBL:AF003099 IPI:IPI00532143
PIR:D96498 RefSeq:NP_175008.1 UniGene:At.10778
ProteinModelPortal:Q7G1L2 SMR:Q7G1L2 EnsemblPlants:AT1G43160.1
GeneID:840915 KEGG:ath:AT1G43160 TAIR:At1g43160 InParanoid:Q7G1L2
PhylomeDB:Q7G1L2 Genevestigator:Q7G1L2 Uniprot:Q7G1L2
Length = 192
Score = 121 (47.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 28/94 (29%), Positives = 49/94 (52%)
Query: 104 QRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALK 163
+R +YRGV + W G++ A + D K +V+LG ++ + AARAYD AAL+
Sbjct: 56 ERPKKYRGVRQRPW-GKWAAEIRD--------PHKATRVWLGTFETAEAAARAYDAAALR 106
Query: 164 YWGATTHINFPLSTYEKELEEMKHMTRQEFVANL 197
+ G+ +NFP + + ++ H + +L
Sbjct: 107 FRGSKAKLNFPENVGTQTIQRNSHFLQNSMQPSL 140
Score = 120 (47.3 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 36/125 (28%), Positives = 54/125 (43%)
Query: 211 YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNF--D 268
YRGV R G+W A I ++LGTF T YD AA++FRG+ A NF +
Sbjct: 61 YRGV-RQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPEN 119
Query: 269 ISRYDVKRICSSSTLIASDLAKRSPKDSAPLVLEDYNSCASSTSPQPLAISNGEASDELV 328
+ ++R +S L S + D P +L Y+ C P + E +
Sbjct: 120 VGTQTIQR--NSHFLQNSMQPSLTYIDQCPTLLS-YSRCMEQQQPLVGMLQPTEEENHFF 176
Query: 329 DMVWS 333
+ W+
Sbjct: 177 EKPWT 181
>TAIR|locus:2135282 [details] [associations]
symbol:AT4G39780 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL022605 EMBL:AL161595
HOGENOM:HOG000239817 EMBL:AY560850 EMBL:BT025719 IPI:IPI00529599
PIR:T05015 RefSeq:NP_195688.1 UniGene:At.2297
ProteinModelPortal:O65665 SMR:O65665 MINT:MINT-7263056 PRIDE:O65665
EnsemblPlants:AT4G39780.1 GeneID:830136 KEGG:ath:AT4G39780
TAIR:At4g39780 eggNOG:NOG292506 InParanoid:O65665 OMA:TEYQESE
PhylomeDB:O65665 ProtClustDB:CLSN2916086 Genevestigator:O65665
Uniprot:O65665
Length = 272
Score = 126 (49.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 37/114 (32%), Positives = 61/114 (53%)
Query: 67 ITPLQVQGVAAD-NRKRPMGKATAAKEPVPRKSIDSFGQRTSQYRGVTRHRWTGRYEAHL 125
+TP Q+ + N++R + A +PVP K++ + Q+ YRGV + W G++ A +
Sbjct: 54 LTPYQIHQIQNQLNQRRNIISPNLAPKPVPMKNMTA--QKL--YRGVRQRHW-GKWVAEI 108
Query: 126 WDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKYWGATTHINFPLSTYE 179
+ +TR ++LG +D ++AA AYDLAA K G +NFP +E
Sbjct: 109 R----LPKNRTR----LWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFPQFRHE 154
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 38/128 (29%), Positives = 57/128 (44%)
Query: 151 DKAARAYDLAALKYWGATTHINF-PLSTYE-KELEEMKHMTRQEFVANLRRKSSGFSR-- 206
D ++ Y + TT + L+ Y+ +++ + R NL K
Sbjct: 30 DSSSPTYSNTVFGF-NQTTSLGLNQLTPYQIHQIQNQLNQRRNIISPNLAPKPVPMKNMT 88
Query: 207 GASVYRGVTRHHQHGRWQARIGRVAGNKD-LYLGTFSTQXXXXXXYDIAAIKFRGTSAVT 265
+YRGV + H G+W A I R+ N+ L+LGTF T YD+AA K RG A
Sbjct: 89 AQKLYRGVRQRHW-GKWVAEI-RLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARL 146
Query: 266 NFDISRYD 273
NF R++
Sbjct: 147 NFPQFRHE 154
>UNIPROTKB|Q5MFV2 [details] [associations]
symbol:BIERF2 "BTH-induced ERF transcriptional factor 2"
species:39946 "Oryza sativa Indica Group" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 EMBL:AY831393 ProteinModelPortal:Q5MFV2 SMR:Q5MFV2
Gramene:Q5MFV2 Uniprot:Q5MFV2
Length = 235
Score = 122 (48.0 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 30/69 (43%), Positives = 41/69 (59%)
Query: 109 YRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKYWGAT 168
YRGV + W GRY A + D + +K R V+LG YD ++AARAYD AA ++ GA
Sbjct: 34 YRGVRKRPW-GRYAAEIRDPA-------KKSR-VWLGTYDTAEEAARAYDAAAREFRGAK 84
Query: 169 THINFPLST 177
NFP ++
Sbjct: 85 AKTNFPFAS 93
Score = 110 (43.8 bits), Expect = 0.00098, P = 0.00098
Identities = 27/65 (41%), Positives = 32/65 (49%)
Query: 203 GFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTS 262
G G YRGV R GR+ A I A ++LGT+ T YD AA +FRG
Sbjct: 26 GVGAGGPHYRGV-RKRPWGRYAAEIRDPAKKSRVWLGTYDTAEEAARAYDAAAREFRGAK 84
Query: 263 AVTNF 267
A TNF
Sbjct: 85 AKTNF 89
>TAIR|locus:2094897 [details] [associations]
symbol:AT3G16280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB023046
EMBL:AC001645 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
HOGENOM:HOG000237624 EMBL:AY995152 EMBL:AY560846 IPI:IPI00539623
RefSeq:NP_188249.3 UniGene:At.50189 ProteinModelPortal:Q9LU18
SMR:Q9LU18 EnsemblPlants:AT3G16280.1 GeneID:820874
KEGG:ath:AT3G16280 GeneFarm:2905 TAIR:At3g16280 eggNOG:NOG281093
InParanoid:Q9LU18 OMA:LPNIEEG ProtClustDB:CLSN2918820
Genevestigator:Q9LU18 Uniprot:Q9LU18
Length = 236
Score = 122 (48.0 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 41/132 (31%), Positives = 62/132 (46%)
Query: 176 STYEKELEEMKHMTRQEFVANLRRKSSGFSRGAS----VYRGVTRHHQHGRWQARIGRVA 231
+T L E + R RR SS S +S VYRGV R G+W + I +
Sbjct: 22 TTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPVYRGV-RMRSWGKWVSEIRQPR 80
Query: 232 GNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIASDLAKR 291
++LGTF T +D+AA+ +G+SAV NF R SSS D+ +
Sbjct: 81 KKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSP---HDI-QT 136
Query: 292 SPKDSAPLVLED 303
+ ++A +V+E+
Sbjct: 137 AAAEAAAMVVEE 148
>TAIR|locus:2131854 [details] [associations]
symbol:CBF1 "C-repeat/DRE binding factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009409 "response to cold" evidence=IEP;IMP;TAS]
[GO:0009631 "cold acclimation" evidence=IEP;IMP] [GO:0009414
"response to water deprivation" evidence=IEP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI;IDA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 GO:GO:0045893
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009631 EMBL:AL022197 EMBL:AL161563 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AF076155 EMBL:AY667247
eggNOG:NOG303203 ProtClustDB:CLSN2687445 EMBL:U77378 EMBL:AB007788
EMBL:AB013816 IPI:IPI00540988 PIR:JE0298 RefSeq:NP_567721.1
UniGene:At.232 ProteinModelPortal:P93835 SMR:P93835 IntAct:P93835
STRING:P93835 PRIDE:P93835 EnsemblPlants:AT4G25490.1 GeneID:828653
KEGG:ath:AT4G25490 GeneFarm:3595 TAIR:At4g25490
HOGENOM:HOG000237624 InParanoid:P93835 PhylomeDB:P93835
Genevestigator:P93835 GermOnline:AT4G25490 Uniprot:P93835
Length = 213
Score = 120 (47.3 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 210 VYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDI 269
+YRGV R G+W + + ++LGTF T +D+AA+ RG SA NF
Sbjct: 47 IYRGV-RQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFAD 105
Query: 270 SRYDVKRICSSSTLIASDLAKRSPKDSAPLVLEDYNSCASSTS 312
S + + RI S+ A D+ K + + A L +D +C ++T+
Sbjct: 106 SAWRL-RIPESTC--AKDIQKAAAE--AALAFQD-ETCDTTTT 142
>TAIR|locus:2151591 [details] [associations]
symbol:ERF104 "ethylene response factor 104" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0050832 "defense response to fungus"
evidence=IMP] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009612 "response to mechanical stimulus" evidence=RCA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0009873 GO:GO:0050832 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AB012239 HOGENOM:HOG000272710 EMBL:AF360149
EMBL:AY054228 EMBL:AY142636 EMBL:AY088694 IPI:IPI00525572
RefSeq:NP_200968.1 UniGene:At.47568 ProteinModelPortal:Q9FKG1
SMR:Q9FKG1 DIP:DIP-48849N IntAct:Q9FKG1 STRING:Q9FKG1
EnsemblPlants:AT5G61600.1 GeneID:836281 KEGG:ath:AT5G61600
TAIR:At5g61600 eggNOG:NOG328203 InParanoid:Q9FKG1 OMA:EEERHYR
PhylomeDB:Q9FKG1 ProtClustDB:CLSN2916553 Genevestigator:Q9FKG1
Uniprot:Q9FKG1
Length = 241
Score = 121 (47.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 82 RPMGKATAAKEPVPRKSID-SFGQRTSQ------YRGVTRHRWTGRYEAHLWDNSCRKEG 134
+P K P+P S+ + +T + YRGV R W G+Y A + D +
Sbjct: 54 KPNSTLNQRKPPLPNLSVSRTVSTKTEKEEEERHYRGVRRRPW-GKYAAEIRDPN----- 107
Query: 135 QTRKGRQVYLGGYDKEDKAARAYDLAALKYWGATTHINFPL 175
+KG +++LG YD +A RAYD AA + G +NFPL
Sbjct: 108 --KKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPL 146
>TAIR|locus:2825329 [details] [associations]
symbol:AT1G71450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC016163 HOGENOM:HOG000237624
EMBL:BT010764 EMBL:BT011790 IPI:IPI00540458 RefSeq:NP_177301.1
UniGene:At.43565 UniGene:At.66830 ProteinModelPortal:Q9C9I2
SMR:Q9C9I2 EnsemblPlants:AT1G71450.1 GeneID:843486
KEGG:ath:AT1G71450 TAIR:At1g71450 eggNOG:NOG312881
InParanoid:Q9C9I2 OMA:DSIRMAV PhylomeDB:Q9C9I2
ProtClustDB:CLSN2914602 Genevestigator:Q9C9I2 Uniprot:Q9C9I2
Length = 183
Score = 116 (45.9 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 31/85 (36%), Positives = 43/85 (50%)
Query: 200 KSSGFSRGA-SVYRGVTRHHQHGRWQARIGRVAGNKD-LYLGTFSTQXXXXXXYDIAAIK 257
K+ +G S YRGV R + G+W + I R G K+ ++LG+F T YD+AA
Sbjct: 12 KAQNDGKGVPSAYRGV-RKRKWGKWVSEI-REPGTKNRIWLGSFETPEMAATAYDVAAFH 69
Query: 258 FRGTSAVTNFDISRYDVKRICSSST 282
FRG A NF + R SS+
Sbjct: 70 FRGREARLNFPELASSLPRPADSSS 94
>TAIR|locus:2032500 [details] [associations]
symbol:ERF11 "ERF domain protein 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0007154 "cell communication" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009863 "salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0009873 "ethylene mediated signaling
pathway" evidence=RCA;TAS] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HOGENOM:HOG000237624 EMBL:AB055882 EMBL:AC010155
EMBL:AF360232 EMBL:AY040032 EMBL:AY086783 IPI:IPI00529285
PIR:B86410 RefSeq:NP_174159.1 UniGene:At.11834
ProteinModelPortal:Q9C5I3 SMR:Q9C5I3 STRING:Q9C5I3 PRIDE:Q9C5I3
EnsemblPlants:AT1G28370.1 GeneID:839733 KEGG:ath:AT1G28370
TAIR:At1g28370 eggNOG:NOG305458 InParanoid:Q9C5I3 OMA:RAIEFRG
PhylomeDB:Q9C5I3 ProtClustDB:CLSN2912737 Genevestigator:Q9C5I3
GermOnline:AT1G28370 Uniprot:Q9C5I3
Length = 166
Score = 113 (44.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 108 QYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKYWGA 167
+YRGV + W GRY A + D +K R V+LG +D ++AARAYD A+++ GA
Sbjct: 19 RYRGVRKRPW-GRYAAEIRD-------PFKKSR-VWLGTFDTPEEAARAYDKRAIEFRGA 69
Query: 168 TTHINFP 174
NFP
Sbjct: 70 KAKTNFP 76
Score = 112 (44.5 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 37/105 (35%), Positives = 48/105 (45%)
Query: 211 YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDIS 270
YRGV R GR+ A I ++LGTF T YD AI+FRG A TNF
Sbjct: 20 YRGV-RKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPC- 77
Query: 271 RYDVKRICSSSTLIASDLAKRSPKDSAPLVLEDYNSCASSTSPQP 315
Y++ C S T L++ S +S+ L + SS P P
Sbjct: 78 -YNINAHCLSLT---QSLSQSSTVESSFPNLNLGSDSVSSRFPFP 118
>TAIR|locus:2197076 [details] [associations]
symbol:RAP2.12 "related to AP2 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IC;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0001666 "response to hypoxia"
evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070483 "detection of hypoxia" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005634 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC009324 GO:GO:0070483 HOGENOM:HOG000237624
EMBL:AY037260 EMBL:AY057545 EMBL:AY113051 EMBL:AY088204
EMBL:AF003105 IPI:IPI00535772 PIR:D96579 RefSeq:NP_001031185.1
RefSeq:NP_175794.1 UniGene:At.20952 UniGene:At.21295
ProteinModelPortal:Q9SSA8 SMR:Q9SSA8 IntAct:Q9SSA8 STRING:Q9SSA8
EnsemblPlants:AT1G53910.1 EnsemblPlants:AT1G53910.2 GeneID:841829
KEGG:ath:AT1G53910 TAIR:At1g53910 eggNOG:NOG262386
InParanoid:Q9SSA8 OMA:NEDAVTT PhylomeDB:Q9SSA8
ProtClustDB:CLSN2682146 Genevestigator:Q9SSA8 Uniprot:Q9SSA8
Length = 358
Score = 124 (48.7 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 61 PIITTAITPLQVQGVAADNRKRPMGKATAAKEPVPRKSIDSFGQRTSQYRGVTRHRWTGR 120
P + T+ TP AA+ GK + KS + +R +QYRG+ + W G+
Sbjct: 82 PFVFTS-TPKPAVSAAAEGSV--FGKKVTGLDGDAEKSANR--KRKNQYRGIRQRPW-GK 135
Query: 121 YEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKYWGATTHINFPLSTYEK 180
+ A + D R+G +++LG + ++AARAYD AA + G+ +NFP
Sbjct: 136 WAAEIRD--------PREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFP------ 181
Query: 181 ELEEMKHMTRQEFV-ANLRR 199
E E MK +++ V ANL++
Sbjct: 182 E-ENMKANSQKRSVKANLQK 200
>TAIR|locus:2058764 [details] [associations]
symbol:ERF38 "ERF family protein 38" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0009834 "secondary cell wall
biogenesis" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC006068 GO:GO:0009834
HOGENOM:HOG000237624 EMBL:AY560845 EMBL:DQ446600 EMBL:DQ653042
EMBL:BT025754 IPI:IPI00524895 PIR:H84771 RefSeq:NP_181113.1
UniGene:At.50671 ProteinModelPortal:Q9ZQP3 SMR:Q9ZQP3
EnsemblPlants:AT2G35700.1 GeneID:818139 KEGG:ath:AT2G35700
TAIR:At2g35700 eggNOG:NOG276561 InParanoid:Q9ZQP3 OMA:MDVETSS
PhylomeDB:Q9ZQP3 ProtClustDB:CLSN2683800 Genevestigator:Q9ZQP3
Uniprot:Q9ZQP3
Length = 194
Score = 117 (46.2 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 33/105 (31%), Positives = 50/105 (47%)
Query: 211 YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDIS 270
+RGV R Q G+W + I ++LGTFST +D+AA+ +G SA NF
Sbjct: 45 FRGV-RMRQWGKWVSEIREPKKKSRIWLGTFSTAEMAARAHDVAALAIKGGSAHLNFPEL 103
Query: 271 RYDVKRICSSSTLIASDLAKRSPKDSAPLVLEDYNSCASSTSPQP 315
Y + R S+ D+ + +A + + D + SS SP P
Sbjct: 104 AYHLPRPASADP---KDIQAAAAAAAAAVAI-DMDVETSSPSPSP 144
>TAIR|locus:505006142 [details] [associations]
symbol:CRF7 "AT1G22985" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AF000657 EMBL:AY062541 EMBL:AY093336 EMBL:AY087064
IPI:IPI00540393 RefSeq:NP_564186.1 UniGene:At.27304
ProteinModelPortal:Q8W4I5 SMR:Q8W4I5 IntAct:Q8W4I5
EnsemblPlants:AT1G22985.1 GeneID:838906 KEGG:ath:AT1G22985
TAIR:At1g22985 eggNOG:NOG242741 HOGENOM:HOG000112390
InParanoid:Q8W4I5 OMA:SDPPEVG PhylomeDB:Q8W4I5
ProtClustDB:CLSN2687921 Genevestigator:Q8W4I5 Uniprot:Q8W4I5
Length = 159
Score = 111 (44.1 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 33/83 (39%), Positives = 44/83 (53%)
Query: 211 YRGVTRHHQHGRWQARI--GRVAGNKD-LYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNF 267
+RGV R G+W A I GRV G + ++LGTF T YD AAI+ G A TNF
Sbjct: 75 FRGV-RQRPWGKWAAEIRCGRVKGRPERIWLGTFETAEEAALAYDNAAIQLIGPDAPTNF 133
Query: 268 ---DISRYDVKRICSSSTLIASD 287
D+ VK+ S ++ AS+
Sbjct: 134 GRPDVDSAVVKKQDSDASGGASE 156
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 123 (48.4 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 31/94 (32%), Positives = 57/94 (60%)
Query: 106 TSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKYW 165
+S+++GV GR+ A +++ K ++V+LG +++ED+AARAYD+AA ++
Sbjct: 59 SSRFKGVVPQP-NGRWGAQIYE----------KHQRVWLGTFNEEDEAARAYDVAAHRFR 107
Query: 166 GATTHINFPLSTYEKELEEMKHMTRQEFVANLRR 199
G NF +T+E+E+E + ++ E V LR+
Sbjct: 108 GRDAVTNFKDTTFEEEVEFLNAHSKSEIVDMLRK 141
>TAIR|locus:2051359 [details] [associations]
symbol:ERF53 "ERF domain 53" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009651
"response to salt stress" evidence=IEP] [GO:2000070 "regulation of
response to water deprivation" evidence=IEP] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC006234 EMBL:AY062843 EMBL:AY081659
IPI:IPI00525064 PIR:E84594 RefSeq:NP_179685.1 UniGene:At.27216
ProteinModelPortal:Q9SKT1 SMR:Q9SKT1 STRING:Q9SKT1
EnsemblPlants:AT2G20880.1 GeneID:816622 KEGG:ath:AT2G20880
TAIR:At2g20880 eggNOG:NOG272542 HOGENOM:HOG000112388
InParanoid:Q9SKT1 OMA:SEETGWA PhylomeDB:Q9SKT1
ProtClustDB:CLSN2683557 Genevestigator:Q9SKT1 GO:GO:2000070
Uniprot:Q9SKT1
Length = 336
Score = 122 (48.0 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 39/121 (32%), Positives = 56/121 (46%)
Query: 185 MKHMTRQEFVANLRRKS-SGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFST 243
M +M RQE L R FS +YRGV + H G+W A I + L+LGTF T
Sbjct: 161 MMNMLRQESDLPLTRPPVQPFS-ATKLYRGVRQRHW-GKWVAEIRKPRNRTRLWLGTFDT 218
Query: 244 QXXXXXXYDIAAIKFRGTSAVTNFD---ISRYDVKRI----CSSSTLIASDLAKRSPKDS 296
YD A K RG +A NF +++ + + C + T + D ++R DS
Sbjct: 219 AEEAAMAYDREAFKLRGETARLNFPELFLNKQEPTPVHQKQCETGTT-SEDSSRRGEDDS 277
Query: 297 A 297
+
Sbjct: 278 S 278
>TAIR|locus:2129111 [details] [associations]
symbol:AT4G16750 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=ISS] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:Z97341 EMBL:AL161544 HOGENOM:HOG000237624
ProtClustDB:CLSN2683800 EMBL:AY560874 EMBL:BT011576 EMBL:BT020592
IPI:IPI00533818 PIR:F85186 RefSeq:NP_193408.1 UniGene:At.33050
ProteinModelPortal:Q9SUK8 SMR:Q9SUK8 EnsemblPlants:AT4G16750.1
GeneID:827379 KEGG:ath:AT4G16750 TAIR:At4g16750 eggNOG:NOG310275
InParanoid:Q9SUK8 OMA:MQDSSSH PhylomeDB:Q9SUK8
Genevestigator:Q9SUK8 Uniprot:Q9SUK8
Length = 179
Score = 114 (45.2 bits), Expect = 0.00010, P = 0.00010
Identities = 37/138 (26%), Positives = 66/138 (47%)
Query: 198 RRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIK 257
+ + G S+ + +RGV R Q G+W + I ++LGTFST +D+AA+
Sbjct: 28 KNEQKGVSKQPN-FRGV-RMRQWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALA 85
Query: 258 FRGTSAVTNFDISRYDVKRICSSSTLIASDLAKRSPKDSAPLVLEDYNSCASSTSPQPLA 317
+G SA NF Y + R S+ D+ + + +A + + S +S+ + P+A
Sbjct: 86 IKGGSAHLNFPELAYHLPRPASADP---KDIQEAAAA-AAAVDWKAPESPSSTVTSSPVA 141
Query: 318 ISNGEASDELVDMVWSAN 335
+A +L D++ N
Sbjct: 142 ---DDAFSDLPDLLLDVN 156
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 27/88 (30%), Positives = 44/88 (50%)
Query: 91 KEPVPRKSIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKE 150
+ PVP K+ S + Q +GV++ W + + RK +++LG +
Sbjct: 14 RSPVPEKTGKSSKTKNEQ-KGVSKQPNFRGVRMRQWGKWVSEIREPRKKSRIWLGTFSTP 72
Query: 151 DKAARAYDLAALKYWGATTHINFPLSTY 178
+ AARA+D+AAL G + H+NFP Y
Sbjct: 73 EMAARAHDVAALAIKGGSAHLNFPELAY 100
>TAIR|locus:2171840 [details] [associations]
symbol:AT5G65130 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AB013395 HOGENOM:HOG000239817
EMBL:AY560858 EMBL:DQ447109 EMBL:DQ653392 EMBL:BT025723
IPI:IPI00516764 RefSeq:NP_201318.1 UniGene:At.50719
ProteinModelPortal:Q9FJQ2 SMR:Q9FJQ2 IntAct:Q9FJQ2 PaxDb:Q9FJQ2
PRIDE:Q9FJQ2 EnsemblPlants:AT5G65130.1 GeneID:836637
KEGG:ath:AT5G65130 TAIR:At5g65130 eggNOG:NOG331618
InParanoid:Q9FJQ2 OMA:ILQIQTE PhylomeDB:Q9FJQ2
ProtClustDB:CLSN2916268 Genevestigator:Q9FJQ2 Uniprot:Q9FJQ2
Length = 277
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 41/137 (29%), Positives = 64/137 (46%)
Query: 44 FQPLSLAMNPTSAEQNGPIITTAITPLQVQGVAAD-----NR-KRPMGKATAAKEPVPRK 97
F P + + P S Q GPI +TP Q+ + + N+ +R G +P K
Sbjct: 41 FIPNNDQVLPVS-NQTGPIGLNQLTPTQILQIQTELHLRQNQSRRRAGSHLLTAKPTSMK 99
Query: 98 SIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAY 157
ID + YRGV + +W G++ A + + +TR ++LG ++ +AA AY
Sbjct: 100 KIDVATKPVKLYRGVRQRQW-GKWVAEIR----LPKNRTR----LWLGTFETAQEAALAY 150
Query: 158 DLAALKYWGATTHINFP 174
D AA K G +NFP
Sbjct: 151 DQAAHKIRGDNARLNFP 167
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 35/80 (43%), Positives = 44/80 (55%)
Query: 205 SRGASVYRGVTRHHQHGRWQARIGRVAGNKD-LYLGTFSTQXXXXXXYDIAAIKFRGTSA 263
++ +YRGV R Q G+W A I R+ N+ L+LGTF T YD AA K RG +A
Sbjct: 105 TKPVKLYRGV-RQRQWGKWVAEI-RLPKNRTRLWLGTFETAQEAALAYDQAAHKIRGDNA 162
Query: 264 VTNF-DISRYD-VKRICSSS 281
NF DI R K+I S S
Sbjct: 163 RLNFPDIVRQGHYKQILSPS 182
>TAIR|locus:2131849 [details] [associations]
symbol:DREB1A "dehydration response element B1A"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009409
"response to cold" evidence=IEP;RCA;IDA;IMP;TAS] [GO:0009414
"response to water deprivation" evidence=RCA;IMP;IDA] [GO:0009631
"cold acclimation" evidence=IMP] [GO:0005982 "starch metabolic
process" evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009631 EMBL:AL022197 EMBL:AL161563 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB007787 EMBL:AB013815
EMBL:AF074602 EMBL:AF076155 EMBL:AF062924 EMBL:AY667247
EMBL:AY691904 EMBL:DQ372533 EMBL:DQ415923 EMBL:BT024594
IPI:IPI00534240 PIR:D85294 PIR:JE0297 PIR:T05799 PIR:T51830
RefSeq:NP_567720.1 UniGene:At.231 ProteinModelPortal:Q9M0L0
SMR:Q9M0L0 STRING:Q9M0L0 PRIDE:Q9M0L0 EnsemblPlants:AT4G25480.1
GeneID:828652 KEGG:ath:AT4G25480 GeneFarm:3593 TAIR:At4g25480
eggNOG:NOG303203 InParanoid:Q9M0L0 PhylomeDB:Q9M0L0
ProtClustDB:CLSN2687445 Genevestigator:Q9M0L0 GermOnline:AT4G25480
Uniprot:Q9M0L0
Length = 216
Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
Identities = 33/102 (32%), Positives = 51/102 (50%)
Query: 210 VYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDI 269
+YRGV R + G+W + ++LGTF T +D+AA+ RG SA NF
Sbjct: 50 IYRGVRRRNS-GKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFAD 108
Query: 270 SRYDVKRICSSSTLIASDLAKRSPKDSAPLVLEDYNSCASST 311
S + + RI S+ A D+ K + + A L +D C ++T
Sbjct: 109 SAWRL-RIPESTC--AKDIQKAAAE--AALAFQD-EMCDATT 144
>TAIR|locus:2055007 [details] [associations]
symbol:AT2G44940 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC002388 HOGENOM:HOG000237624
EMBL:BT008564 EMBL:BT008677 EMBL:AK229616 EMBL:AY087052
IPI:IPI00533012 PIR:T00399 RefSeq:NP_182021.1 UniGene:At.14592
ProteinModelPortal:Q8LBQ7 SMR:Q8LBQ7 EnsemblPlants:AT2G44940.1
GeneID:819103 KEGG:ath:AT2G44940 GeneFarm:2901 TAIR:At2g44940
eggNOG:NOG294541 InParanoid:Q8LBQ7 OMA:DENEMMI PhylomeDB:Q8LBQ7
ProtClustDB:CLSN2913029 Genevestigator:Q8LBQ7 Uniprot:Q8LBQ7
Length = 295
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 40/171 (23%), Positives = 75/171 (43%)
Query: 198 RRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIK 257
RRK++G + + YRGV R G+W + I ++LGT+ T +D+AA+
Sbjct: 88 RRKTNGGDKHPT-YRGV-RMRSWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALA 145
Query: 258 FRGTSAVTNFDISRYDVKRICSSSTLIASDLAKRSPKDSAPLVLEDYNSCASSTSPQPLA 317
+GT+A NF ++ R ++S D+ + +A L ++ + S +A
Sbjct: 146 IKGTTAYLNFPKLAGELPRPVTNSP---KDI-----QAAASLAAVNWQDSVNDVSNSEVA 197
Query: 318 -ISNGEASDELVDMVWSANSXXXXXXXXXXXXETSLGASGSRNSSNPESPK 367
I E S +V ++S+++ E S ++ + + E K
Sbjct: 198 EIVEAEPSRAVVAQLFSSDTSTTTTTQSQEYSEASCASTSACTDKDSEEEK 248
>TAIR|locus:2132962 [details] [associations]
symbol:CRF4 "AT4G27950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0042991 "transcription factor import into nucleus"
evidence=IDA] [GO:0048366 "leaf development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 GO:GO:0005737 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337
GO:GO:0009736 EMBL:AL161572 GO:GO:0048366 EMBL:AL035524
GO:GO:0042991 HOGENOM:HOG000237664 ProtClustDB:CLSN2686526
EMBL:BT033088 EMBL:AY560872 IPI:IPI00529666 PIR:T02896
RefSeq:NP_194524.2 UniGene:At.49716 ProteinModelPortal:Q9SUE3
SMR:Q9SUE3 IntAct:Q9SUE3 EnsemblPlants:AT4G27950.1 GeneID:828908
KEGG:ath:AT4G27950 TAIR:At4g27950 eggNOG:NOG284469
InParanoid:Q9SUE3 OMA:FLEPEQE Genevestigator:Q9SUE3 Uniprot:Q9SUE3
Length = 335
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 28/71 (39%), Positives = 37/71 (52%)
Query: 199 RKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKF 258
+K S + YRGV R G+W A I + ++LGTF+T YD AAIK
Sbjct: 106 QKPSVSGQNQKKYRGV-RQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKL 164
Query: 259 RGTSAVTNFDI 269
RG A+TNF +
Sbjct: 165 RGPDALTNFTV 175
>TAIR|locus:2171514 [details] [associations]
symbol:ERF2 "ethylene responsive element binding factor
2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0009873
"ethylene mediated signaling pathway" evidence=RCA;TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0009864 "induced systemic resistance,
jasmonic acid mediated signaling pathway" evidence=IMP] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0002679 "respiratory
burst involved in defense response" evidence=RCA] [GO:0009693
"ethylene biosynthetic process" evidence=RCA] [GO:0009723 "response
to ethylene stimulus" evidence=RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0035556 "intracellular
signal transduction" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200
EMBL:AB018117 HOGENOM:HOG000239314 EMBL:AB008104 EMBL:AK175151
EMBL:AK175229 EMBL:AK176532 EMBL:AK176606 EMBL:AK176825
EMBL:BT024470 EMBL:AY086983 IPI:IPI00521608 PIR:T51989
RefSeq:NP_199533.1 UniGene:At.19731 ProteinModelPortal:O80338
SMR:O80338 STRING:O80338 PRIDE:O80338 EnsemblPlants:AT5G47220.1
GeneID:834768 KEGG:ath:AT5G47220 TAIR:At5g47220 eggNOG:NOG285540
InParanoid:O80338 KO:K14517 OMA:TPSSCFT PhylomeDB:O80338
ProtClustDB:CLSN2914897 Genevestigator:O80338 GermOnline:AT5G47220
GO:GO:0009864 Uniprot:O80338
Length = 243
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 34/122 (27%), Positives = 61/122 (50%)
Query: 83 PMGKATAAKEPVPRKSID--SFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 140
P TA +E P+K+I + YRGV + W G++ A + D + + G
Sbjct: 90 PTENFTAMEEK-PKKAIPVTETAVKAKHYRGVRQRPW-GKFAAEIRDPA-------KNGA 140
Query: 141 QVYLGGYDKEDKAARAYDLAALKYWGATTHINFPLSTYEKELEEMKHMTRQEFVANLRRK 200
+V+LG ++ + AA AYD+AA + G+ +NFPL E + ++ +++ ++
Sbjct: 141 RVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEPDPVRITSKRSSSSSSSSS 200
Query: 201 SS 202
SS
Sbjct: 201 SS 202
>TAIR|locus:2124504 [details] [associations]
symbol:AT4G18450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0010200 "response to chitin" evidence=IEP]
[GO:0006457 "protein folding" evidence=RCA] [GO:0009408 "response
to heat" evidence=RCA] [GO:0009644 "response to high light
intensity" evidence=RCA] [GO:0042542 "response to hydrogen
peroxide" evidence=RCA] [GO:0009873 "ethylene mediated signaling
pathway" evidence=TAS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 HSSP:O80337 EMBL:AL161548
EMBL:AL021710 EMBL:AY560868 IPI:IPI00543138 PIR:T04541
RefSeq:NP_193580.1 UniGene:At.32901 ProteinModelPortal:O49515
SMR:O49515 EnsemblPlants:AT4G18450.1 GeneID:827576
KEGG:ath:AT4G18450 TAIR:At4g18450 eggNOG:NOG286829
HOGENOM:HOG000241588 OMA:EWTEILD PhylomeDB:O49515
ProtClustDB:CLSN2915846 Genevestigator:O49515 Uniprot:O49515
Length = 303
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 105 RTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKY 164
+T +YRGV + W G++ A + D+ TR G +V+LG + ++AA AYD AA++
Sbjct: 106 KTRKYRGVRKRPW-GKFAAEIRDS-------TRNGVRVWLGTFQTAEEAAMAYDKAAVRI 157
Query: 165 WGAT-THINFPLSTYEKELE 183
G H NF L T K +E
Sbjct: 158 RGTQKAHTNFQLETVIKAME 177
>TAIR|locus:2145477 [details] [associations]
symbol:SHN3 "shine3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006950
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC006258
HOGENOM:HOG000237624 ProtClustDB:CLSN2692546 EMBL:AK118780
EMBL:BT005461 EMBL:BX834028 IPI:IPI00539200 IPI:IPI00541689
RefSeq:NP_197921.1 RefSeq:NP_851073.1 UniGene:At.19636
ProteinModelPortal:Q3E958 SMR:Q3E958 IntAct:Q3E958
EnsemblPlants:AT5G25390.2 GeneID:832611 KEGG:ath:AT5G25390
TAIR:At5g25390 eggNOG:NOG243679 InParanoid:Q3E958 OMA:LDNDSSH
PhylomeDB:Q3E958 Genevestigator:Q3E958 Uniprot:Q3E958
Length = 189
Score = 114 (45.2 bits), Expect = 0.00015, P = 0.00015
Identities = 34/90 (37%), Positives = 45/90 (50%)
Query: 211 YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDIS 270
+RGV R Q G W + I + ++LGTF T YD AA+ G SA TNF +
Sbjct: 7 FRGV-RQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV- 64
Query: 271 RYDVKRICSSSTLIASDLAKRSPKDSAPLV 300
+K S+S I S L RSPK + L+
Sbjct: 65 ---IKSNGSNSLEINSAL--RSPKSLSELL 89
>TAIR|locus:2167659 [details] [associations]
symbol:ERF9 "erf domain protein 9" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0016020 "membrane" evidence=IDA]
[GO:0006857 "oligopeptide transport" evidence=RCA] [GO:0009873
"ethylene mediated signaling pathway" evidence=TAS]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006952 GO:GO:0009873 GO:GO:0016020
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB005239 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
EMBL:AB047648 EMBL:AY560856 EMBL:BT015876 EMBL:BT020188
IPI:IPI00535860 RefSeq:NP_199234.1 UniGene:At.30087
ProteinModelPortal:Q9FE67 SMR:Q9FE67 IntAct:Q9FE67 STRING:Q9FE67
EnsemblPlants:AT5G44210.1 GeneID:834444 KEGG:ath:AT5G44210
TAIR:At5g44210 eggNOG:NOG249494 InParanoid:Q9FE67 OMA:FACHRER
PhylomeDB:Q9FE67 ProtClustDB:CLSN2916712 Genevestigator:Q9FE67
GermOnline:AT5G44210 Uniprot:Q9FE67
Length = 200
Score = 115 (45.5 bits), Expect = 0.00015, P = 0.00015
Identities = 33/92 (35%), Positives = 48/92 (52%)
Query: 85 GKATAAKEPVPRKSIDSFGQRTS-QYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVY 143
G++ A E K++ R +RGV + W GRY A + R G K +V+
Sbjct: 8 GRSIAVSEGGGGKTMTMTTMRKEVHFRGVRKRPW-GRYAAEI-----RDPG---KKTRVW 58
Query: 144 LGGYDKEDKAARAYDLAALKYWGATTHINFPL 175
LG +D ++AARAYD AA ++ G+ NFPL
Sbjct: 59 LGTFDTAEEAARAYDTAAREFRGSKAKTNFPL 90
>TAIR|locus:2129106 [details] [associations]
symbol:ERF6 "AT4G17490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0009873 "ethylene mediated signaling pathway"
evidence=RCA;TAS] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0000302 "response to reactive oxygen species"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009644 "response to high light intensity" evidence=IMP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 EMBL:Z97343 EMBL:AL161546
HOGENOM:HOG000272710 ProtClustDB:CLSN2689485 EMBL:AB008316
EMBL:AB013301 EMBL:AY065155 EMBL:AY114588 IPI:IPI00547267
PIR:E71444 PIR:T52189 RefSeq:NP_567529.1 UniGene:At.24407
UniGene:At.71513 ProteinModelPortal:Q8VZ91 SMR:Q8VZ91 STRING:Q8VZ91
PaxDb:Q8VZ91 PRIDE:Q8VZ91 EnsemblPlants:AT4G17490.1 GeneID:827463
KEGG:ath:AT4G17490 GeneFarm:4729 TAIR:At4g17490 eggNOG:NOG274811
InParanoid:Q8VZ91 OMA:KWIQFAT PhylomeDB:Q8VZ91
Genevestigator:Q8VZ91 GermOnline:AT4G17490 Uniprot:Q8VZ91
Length = 282
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 37/120 (30%), Positives = 59/120 (49%)
Query: 57 EQNGPIITTAITPLQVQGVAADNRKRPMGKATAAKEP-VPRKSIDSFGQRTSQYRGVTRH 115
+ N P +T +A NR + + AT +P +P + + +R YRGV
Sbjct: 86 QSNPPRVTVQSNRKPPLKIAPPNRTKWIQFATGNPKPELPVPVVAAEEKR--HYRGVRMR 143
Query: 116 RWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKYWGATTHINFPL 175
W G++ A + D TR+G +V+LG ++ +AARAYD A + G+ +NFPL
Sbjct: 144 PW-GKFAAEIRD-------PTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPL 195
>TAIR|locus:2012653 [details] [associations]
symbol:AT1G33760 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624 EMBL:AY560838
EMBL:AC010164 EMBL:BT015928 EMBL:BT020566 IPI:IPI00520537
PIR:A86461 RefSeq:NP_174636.1 UniGene:At.39878
ProteinModelPortal:Q9LQ28 SMR:Q9LQ28 EnsemblPlants:AT1G33760.1
GeneID:840267 KEGG:ath:AT1G33760 TAIR:At1g33760 eggNOG:NOG312231
InParanoid:Q9LQ28 OMA:FPRPESS PhylomeDB:Q9LQ28
ProtClustDB:CLSN2914626 Genevestigator:Q9LQ28 Uniprot:Q9LQ28
Length = 184
Score = 113 (44.8 bits), Expect = 0.00016, P = 0.00016
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 102 FGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAA 161
F YRG+ R +W G+ W + R+ G K +++LG Y+ + AA AYD AA
Sbjct: 13 FNVNQLSYRGIRRRKW-GK-----WVSEIREPG---KKTRIWLGSYETAEMAAAAYDAAA 63
Query: 162 LKYWGATTHINFP 174
L G T++NFP
Sbjct: 64 LHLRGRGTNLNFP 76
>TAIR|locus:2825842 [details] [associations]
symbol:RAP2.1 "related to AP2 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009873
GO:GO:0003677 GO:GO:0009409 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC083835 HOGENOM:HOG000237624 EMBL:BT024691
EMBL:AY086838 EMBL:Z27045 EMBL:AF003094 IPI:IPI00543804 PIR:H96511
RefSeq:NP_564496.1 UniGene:At.28676 ProteinModelPortal:Q8LC30
SMR:Q8LC30 PaxDb:Q8LC30 PRIDE:Q8LC30 EnsemblPlants:AT1G46768.1
GeneID:841117 KEGG:ath:AT1G46768 TAIR:At1g46768 eggNOG:NOG284485
InParanoid:Q8LC30 OMA:QEESTMR PhylomeDB:Q8LC30
ProtClustDB:CLSN2917164 Genevestigator:Q8LC30 Uniprot:Q8LC30
Length = 153
Score = 107 (42.7 bits), Expect = 0.00017, P = 0.00017
Identities = 33/120 (27%), Positives = 59/120 (49%)
Query: 91 KEPVPRKSIDSFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKE 150
++P P++ + + YRG+ R +W G++ A + +E R +++LG Y +
Sbjct: 14 RQP-PQEEVPNHVATRKPYRGIRRRKW-GKWVAEI------REPNKRS--RLWLGSYTTD 63
Query: 151 DKAARAYDLAALKYWGATTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASV 210
AARAYD+A G + +NFP ++E + + T + A L R+ + GA V
Sbjct: 64 IAAARAYDVAVFYLRGPSARLNFPDLLLQEE-DHLSAATTADMPAALIREKAA-EVGARV 121
>TAIR|locus:2195985 [details] [associations]
symbol:AT1G77200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873
GO:GO:0003677 EMBL:AC004260 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
EMBL:AY560875 EMBL:DQ446437 EMBL:DQ652938 IPI:IPI00531080
PIR:T00449 RefSeq:NP_177844.1 UniGene:At.50584
ProteinModelPortal:O80654 SMR:O80654 EnsemblPlants:AT1G77200.1
GeneID:844056 KEGG:ath:AT1G77200 TAIR:At1g77200 eggNOG:NOG297347
InParanoid:O80654 OMA:DENGISM PhylomeDB:O80654
ProtClustDB:CLSN2912844 Genevestigator:O80654 Uniprot:O80654
Length = 244
Score = 117 (46.2 bits), Expect = 0.00017, P = 0.00017
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 181 ELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGT 240
E E+ H + N +++ R YRGV R G+W + I ++LGT
Sbjct: 17 EEEDHHHHQQDSHRTNTKKRV----RSDPGYRGV-RMRTWGKWVSEIREPRKKSRIWLGT 71
Query: 241 FSTQXXXXXXYDIAAIKFRGTSAVTNF-DISRYDVKRICSSSTLIASDLAKRSPKDSAP 298
FST +D AA+ +GTSAV NF +++ Y + SS + + A + D +P
Sbjct: 72 FSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSP 130
Score = 100 (40.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 109 YRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKYWGAT 168
YRGV W G+ W + R + RK +++LG + + AARA+D AAL G +
Sbjct: 43 YRGVRMRTW-GK-----WVSEIR---EPRKKSRIWLGTFSTPEMAARAHDAAALTIKGTS 93
Query: 169 THINFP-LSTY 178
+NFP L+TY
Sbjct: 94 AVLNFPELATY 104
Score = 56 (24.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 279 SSSTLIASDLAKRSPKDSAPLVLEDYNSCASST-SPQPL-AISNGEASDELVDM 330
SSS+L+ SD L Y++C SS+ SP A S E E+V++
Sbjct: 131 SSSSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVEL 184
>TAIR|locus:2026301 [details] [associations]
symbol:CRF8 "AT1G71130" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016036 "cellular
response to phosphate starvation" evidence=RCA] [GO:0019375
"galactolipid biosynthetic process" evidence=RCA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009873 EMBL:AC016972
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000112390
ProtClustDB:CLSN2687921 EMBL:AK175578 EMBL:AK175683 EMBL:AK175740
EMBL:AK175774 EMBL:AK175931 EMBL:AK176043 EMBL:AK176144
EMBL:AK176280 EMBL:BT025618 EMBL:AY085910 IPI:IPI00531448
PIR:H96735 RefSeq:NP_565012.1 UniGene:At.35227 UniGene:At.74176
ProteinModelPortal:Q9C995 SMR:Q9C995 IntAct:Q9C995
EnsemblPlants:AT1G71130.1 GeneID:843453 KEGG:ath:AT1G71130
TAIR:At1g71130 eggNOG:NOG245226 InParanoid:Q9C995 OMA:RIIRISF
PhylomeDB:Q9C995 Genevestigator:Q9C995 Uniprot:Q9C995
Length = 161
Score = 109 (43.4 bits), Expect = 0.00019, P = 0.00019
Identities = 30/64 (46%), Positives = 36/64 (56%)
Query: 211 YRGVTRHHQHGRWQARI--GRVA--GNKD-LYLGTFSTQXXXXXXYDIAAIKFRGTSAVT 265
YRGV R G+W A I GR A G +D L+LGTF+T YD A+IK G A T
Sbjct: 79 YRGV-RQRPWGKWVAEIRCGRGACKGRRDRLWLGTFNTAEEAALAYDNASIKLIGPHAPT 137
Query: 266 NFDI 269
NF +
Sbjct: 138 NFGL 141
>TAIR|locus:2134128 [details] [associations]
symbol:AT4G32800 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL161582 HOGENOM:HOG000237624
ProtClustDB:CLSN2685437 EMBL:BT002924 EMBL:BT004343 EMBL:AY088918
IPI:IPI00548529 PIR:T10687 RefSeq:NP_195006.1 UniGene:At.31634
ProteinModelPortal:Q9M080 SMR:Q9M080 EnsemblPlants:AT4G32800.1
GeneID:829416 KEGG:ath:AT4G32800 TAIR:At4g32800 eggNOG:NOG307860
InParanoid:Q9M080 OMA:EMAMRAH PhylomeDB:Q9M080
Genevestigator:Q9M080 Uniprot:Q9M080
Length = 221
Score = 115 (45.5 bits), Expect = 0.00022, P = 0.00022
Identities = 38/130 (29%), Positives = 63/130 (48%)
Query: 210 VYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNF-D 268
VYRGV R G+W + I ++LGTF T +D+AA+ +GTSA+ NF +
Sbjct: 18 VYRGV-RMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIKGTSAILNFPE 76
Query: 269 ISRYDVKRICSSSTLIASDLAKRSPKDSAPLVLEDYNSCASSTSPQPLAISN--GEASDE 326
+S+ + + +L D+ R+ A L+ D + S T SN E+S+
Sbjct: 77 LSKLLPRPV----SLSPRDV--RAAATKAALMDFDTTAFRSDTETSETTTSNKMSESSES 130
Query: 327 LVDMVWSANS 336
+ +S++S
Sbjct: 131 NETVSFSSSS 140
>TAIR|locus:2087065 [details] [associations]
symbol:ERF4 "ethylene responsive element binding factor
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IC;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0010105
"negative regulation of ethylene mediated signaling pathway"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0009723 "response to ethylene
stimulus" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0016604 "nuclear body" evidence=IDA]
[GO:0009864 "induced systemic resistance, jasmonic acid mediated
signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045892 GO:GO:0009873
GO:GO:0009723 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0010200 GO:GO:0010105
GO:GO:0016604 HOGENOM:HOG000237624 GO:GO:0009864 EMBL:AF003098
EMBL:AB008106 EMBL:AP000413 EMBL:AY140030 EMBL:BT010325
EMBL:AY086232 IPI:IPI00539614 PIR:T52019 RefSeq:NP_188139.1
UniGene:At.47551 ProteinModelPortal:O80340 SMR:O80340 IntAct:O80340
STRING:O80340 EnsemblPlants:AT3G15210.1 GeneID:820752
KEGG:ath:AT3G15210 TAIR:At3g15210 eggNOG:NOG298559
InParanoid:O80340 OMA:DCASPPT PhylomeDB:O80340
ProtClustDB:CLSN2679790 Genevestigator:O80340 GermOnline:AT3G15210
Uniprot:O80340
Length = 222
Score = 115 (45.5 bits), Expect = 0.00022, P = 0.00022
Identities = 33/79 (41%), Positives = 44/79 (55%)
Query: 108 QYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKYWGA 167
+YRGV + W GRY A + R G K +V+LG +D ++AARAYD AA + GA
Sbjct: 24 RYRGVRKRPW-GRYAAEI-----RDPG---KKTRVWLGTFDTAEEAARAYDTAARDFRGA 74
Query: 168 TTHINFPLSTYEKELEEMK 186
NFP T+ EL + K
Sbjct: 75 KAKTNFP--TF-LELSDQK 90
>TAIR|locus:2145249 [details] [associations]
symbol:tny "TINY" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009825 "multidimensional cell growth" evidence=IMP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171 HOGENOM:HOG000237624
ProtClustDB:CLSN2686631 EMBL:AC005405 EMBL:X94698 EMBL:AY560855
EMBL:BT024923 IPI:IPI00548044 PIR:T01076 RefSeq:NP_197953.1
UniGene:At.5373 ProteinModelPortal:Q39127 SMR:Q39127 IntAct:Q39127
STRING:Q39127 EnsemblPlants:AT5G25810.1 GeneID:832650
KEGG:ath:AT5G25810 GeneFarm:3729 TAIR:At5g25810 eggNOG:NOG248116
InParanoid:Q39127 OMA:SWEASAV PhylomeDB:Q39127
Genevestigator:Q39127 Uniprot:Q39127
Length = 218
Score = 114 (45.2 bits), Expect = 0.00027, P = 0.00027
Identities = 39/130 (30%), Positives = 61/130 (46%)
Query: 210 VYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDI 269
VYRGV R G+W + I ++LGTF + +D+AA+ +G SA+ NF
Sbjct: 35 VYRGV-RKRNWGKWVSEIREPRKKSRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPD 93
Query: 270 SRYDVKRICSSS-------TLIASDL-AKRSPKDSAPLVLEDYNSCASSTSPQPLAISNG 321
R S S L A+ + +S S+ L ++S SS+S + L S+
Sbjct: 94 LAGSFPRPSSLSPRDIQVAALKAAHMETSQSFSSSSSLT---FSSSQSSSSLESLVSSSA 150
Query: 322 EASDELVDMV 331
S+EL ++V
Sbjct: 151 TGSEELGEIV 160
>UNIPROTKB|Q5MFV3 [details] [associations]
symbol:BIERF1 "BTH-induced ERF transcriptional factor 1"
species:39946 "Oryza sativa Indica Group" [GO:0009620 "response to
fungus" evidence=IEP] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009620 EMBL:AY831392
ProteinModelPortal:Q5MFV3 SMR:Q5MFV3 Gramene:Q5MFV3 Uniprot:Q5MFV3
Length = 399
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 104 QRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALK 163
+R +QYRG+ + W G++ A + D S KG +V+LG Y+ ++AARAYD A K
Sbjct: 134 KRKNQYRGIRQRPW-GKWAAEIRDPS--------KGVRVWLGTYNTAEEAARAYDAEARK 184
Query: 164 YWGATTHINFPLS-TYEKELEEMKHMTRQEFVA 195
G +NFP ++L ++ +QE +A
Sbjct: 185 IRGKKAKVNFPDEPAVAQKLSLKQNAAKQEKLA 217
>TAIR|locus:2055002 [details] [associations]
symbol:ERF13 "ethylene-responsive element binding factor
13" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0002679 "respiratory
burst involved in defense response" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0007165 "signal
transduction" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009873 "ethylene
mediated signaling pathway" evidence=RCA;TAS] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=RCA]
[GO:0043069 "negative regulation of programmed cell death"
evidence=RCA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006952 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 GO:GO:0010200 EMBL:AC002388 HOGENOM:HOG000239314
EMBL:AF325089 EMBL:AF370540 EMBL:AY072471 EMBL:AY088387
IPI:IPI00525442 PIR:T00409 RefSeq:NP_182011.1 UniGene:At.29014
ProteinModelPortal:Q8L9K1 SMR:Q8L9K1 STRING:Q8L9K1
EnsemblPlants:AT2G44840.1 GeneID:819093 KEGG:ath:AT2G44840
TAIR:At2g44840 eggNOG:NOG314595 InParanoid:Q8L9K1 OMA:EQKRESH
PhylomeDB:Q8L9K1 ProtClustDB:CLSN2913027 Genevestigator:Q8L9K1
GermOnline:AT2G44840 Uniprot:Q8L9K1
Length = 226
Score = 114 (45.2 bits), Expect = 0.00030, P = 0.00030
Identities = 31/94 (32%), Positives = 46/94 (48%)
Query: 83 PMGKATAAKEPVPRKSIDSFG--QRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGR 140
P+ +P K+ S Q+ QYRGV R W G++ A + D + G
Sbjct: 64 PVTSPAEENKPPATKASGSHAPRQKGMQYRGVRRRPW-GKFAAEIRDPK-------KNGA 115
Query: 141 QVYLGGYDKEDKAARAYDLAALKYWGATTHINFP 174
+V+LG Y+ + AA AYD AA + G+ +NFP
Sbjct: 116 RVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149
>TAIR|locus:2089368 [details] [associations]
symbol:EBP "ethylene-responsive element binding protein"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity"
evidence=IEA;ISS;IDA;IMP;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0051707 "response to other
organism" evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0008219 "cell
death" evidence=IMP] [GO:0010286 "heat acclimation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009753 "response
to jasmonic acid stimulus" evidence=IEP] [GO:0009873 "ethylene
mediated signaling pathway" evidence=TAS] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0009735
GO:GO:0009753 GO:GO:0006950 GO:GO:0009873 GO:GO:0003677
GO:GO:0008219 GO:GO:0003700 GO:GO:0006351 GO:GO:0051707 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AB022217
HOGENOM:HOG000237624 EMBL:Y09942 EMBL:Z37504 EMBL:AF003096
EMBL:AY059917 EMBL:AY035100 EMBL:AY142562 EMBL:AY087488
IPI:IPI00516463 RefSeq:NP_188299.1 UniGene:At.24773
ProteinModelPortal:P42736 SMR:P42736 IntAct:P42736 STRING:P42736
EnsemblPlants:AT3G16770.1 GeneID:820929 KEGG:ath:AT3G16770
TAIR:At3g16770 eggNOG:NOG300006 InParanoid:P42736 OMA:WSELDAS
PhylomeDB:P42736 ProtClustDB:CLSN2684019 Genevestigator:P42736
GermOnline:AT3G16770 Uniprot:P42736
Length = 248
Score = 114 (45.2 bits), Expect = 0.00040, P = 0.00040
Identities = 30/104 (28%), Positives = 53/104 (50%)
Query: 74 GVAADNRKRPMGKATAAKEPVPRKSIDSFGQRTSQ---YRGVTRHRWTGRYEAHLWDNSC 130
G + ++ P + +E V ++ G+R + YRG+ + W G++ A + D
Sbjct: 41 GFYSTSKLHPTNQVNVKEEAVKKEQATEPGKRRKRKNVYRGIRKRPW-GKWAAEIRD--- 96
Query: 131 RKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKYWGATTHINFP 174
RKG +V+LG ++ ++AA AYD+AA + G +NFP
Sbjct: 97 -----PRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFP 135
>TAIR|locus:2156171 [details] [associations]
symbol:AT5G61890 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0050832 "defense response to fungus"
evidence=IEP] [GO:0006865 "amino acid transport" evidence=RCA]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009873 GO:GO:0050832 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AB022212 EMBL:AY560862 IPI:IPI00539427
RefSeq:NP_200995.1 UniGene:At.29079 ProteinModelPortal:Q9FH54
SMR:Q9FH54 PaxDb:Q9FH54 PRIDE:Q9FH54 EnsemblPlants:AT5G61890.1
GeneID:836310 KEGG:ath:AT5G61890 TAIR:At5g61890 eggNOG:NOG273323
HOGENOM:HOG000057294 InParanoid:Q9FH54 OMA:FSARSQH PhylomeDB:Q9FH54
ProtClustDB:CLSN2686950 ArrayExpress:Q9FH54 Genevestigator:Q9FH54
Uniprot:Q9FH54
Length = 248
Score = 114 (45.2 bits), Expect = 0.00040, P = 0.00040
Identities = 33/99 (33%), Positives = 48/99 (48%)
Query: 211 YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDIS 270
YRGV R G+W A I ++LGTF T YD AA+KF+G+ A NF
Sbjct: 90 YRGV-RQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFP-E 147
Query: 271 RYDVKRICSSSTLIASDLAKRSPKDSAPLVLEDYNSCAS 309
R ++ S+ST +S+ + S P + Y+ +S
Sbjct: 148 RV---QLGSNSTYYSSNQIPQMEPQSIPNYNQYYHDASS 183
>TAIR|locus:2144296 [details] [associations]
symbol:TINY2 "AT5G11590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0009873
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AL163815 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 HOGENOM:HOG000237624
EMBL:AY940160 EMBL:AY560851 IPI:IPI00526417 PIR:T48518
RefSeq:NP_196720.1 UniGene:At.50619 ProteinModelPortal:Q9LYD3
SMR:Q9LYD3 EnsemblPlants:AT5G11590.1 GeneID:831031
KEGG:ath:AT5G11590 TAIR:At5g11590 eggNOG:NOG295419
InParanoid:Q9LYD3 OMA:SSEDNYG PhylomeDB:Q9LYD3
ProtClustDB:CLSN2686631 Genevestigator:Q9LYD3 Uniprot:Q9LYD3
Length = 236
Score = 113 (44.8 bits), Expect = 0.00045, P = 0.00045
Identities = 45/153 (29%), Positives = 68/153 (44%)
Query: 210 VYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNFDI 269
VYRGV R G+W + I ++LGTF T +D+AA+ +GT+A+ NF
Sbjct: 50 VYRGV-RMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGTAAILNFPE 108
Query: 270 SRYDVKRICSSSTLIASDLAKRSPKDSAPLVLEDYNSCASSTSPQPLAISNGEASDELVD 329
R S S D+ + K + +E S +SSTS ++S+ + + LV
Sbjct: 109 LADSFPRPVSLSP---RDIQTAALKAAH---MEPTTSFSSSTSSSS-SLSSTSSLESLV- 160
Query: 330 MVWSANSXXXXXXXXXXXXETSLGASGSRNSSN 362
+V S SLGAS +S+N
Sbjct: 161 LVMDL-SRTESEELGEIVELPSLGASYDVDSAN 192
>TAIR|locus:2123708 [details] [associations]
symbol:AT4G28140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009873 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 KO:K09286 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 HSSP:O80337 EMBL:AL161572 HOGENOM:HOG000112388
EMBL:DQ011579 EMBL:AY074574 EMBL:AY097394 IPI:IPI00520768
PIR:T09030 RefSeq:NP_194543.1 UniGene:At.32043 UniGene:At.72101
ProteinModelPortal:Q9M0J3 SMR:Q9M0J3 PRIDE:Q9M0J3
EnsemblPlants:AT4G28140.1 GeneID:828929 KEGG:ath:AT4G28140
TAIR:At4g28140 eggNOG:NOG269342 InParanoid:Q9M0J3 OMA:DQKEPET
PhylomeDB:Q9M0J3 ProtClustDB:CLSN2915905 Genevestigator:Q9M0J3
Uniprot:Q9M0J3
Length = 292
Score = 115 (45.5 bits), Expect = 0.00045, P = 0.00045
Identities = 26/58 (44%), Positives = 30/58 (51%)
Query: 210 VYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNF 267
+YRGV R Q G+W A I + L+LGTF T YD A K RG SA NF
Sbjct: 142 LYRGV-RQRQWGKWVAEIRKPRSRARLWLGTFDTAEEAAMAYDRQAFKLRGHSATLNF 198
>TAIR|locus:2043495 [details] [associations]
symbol:ESE2 "ethylene and salt inducible 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847
PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
HSSP:O80337 EMBL:AC005395 HOGENOM:HOG000237624 EMBL:AY974198
EMBL:AY600555 EMBL:AF370341 EMBL:AY063000 EMBL:AY560870
EMBL:AY924749 IPI:IPI00533727 PIR:B84653 RefSeq:NP_565609.3
UniGene:At.13046 ProteinModelPortal:Q52QU1 SMR:Q52QU1
EnsemblPlants:AT2G25820.1 GeneID:817124 KEGG:ath:AT2G25820
TAIR:At2g25820 eggNOG:NOG262348 OMA:FPELADF PhylomeDB:Q52QU1
ProtClustDB:CLSN2685437 Genevestigator:Q52QU1 Uniprot:Q52QU1
Length = 225
Score = 112 (44.5 bits), Expect = 0.00051, P = 0.00051
Identities = 40/161 (24%), Positives = 69/161 (42%)
Query: 199 RKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKF 258
+K ++ VYRG R G+W + I ++LGTF T +D+AA+
Sbjct: 14 KKKKEKTKEKGVYRGA-RMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSI 72
Query: 259 RGTSAVTNF-DISRYDVKRICSSSTLIASDLAKRSPKD--SAPLVLEDYNSCASSTSPQP 315
+G+SA+ NF +++ + + + S I + A+ + D + P L+D ST P
Sbjct: 73 KGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQD-----DST---P 124
Query: 316 LAISNGEASDELVDMVWSANSXXXXXXXXXXXXETSLGASG 356
L E ++ WS++S +S SG
Sbjct: 125 LQT---RCDTEKIEK-WSSSSSSASSSSSSSSSSSSSMLSG 161
>TAIR|locus:2005704 [details] [associations]
symbol:AT1G75490 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001471 InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367
PROSITE:PS51032 SMART:SM00380 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006950 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10 SUPFAM:SSF54171
GO:GO:0010200 EMBL:AC006434 EMBL:AK175902 IPI:IPI00536836
RefSeq:NP_177681.2 UniGene:At.34770 UniGene:At.74106
ProteinModelPortal:Q9LQZ2 SMR:Q9LQZ2 PaxDb:Q9LQZ2 PRIDE:Q9LQZ2
EnsemblPlants:AT1G75490.1 GeneID:843885 KEGG:ath:AT1G75490
GeneFarm:3662 TAIR:At1g75490 eggNOG:NOG311950 HOGENOM:HOG000033697
InParanoid:Q9LQZ2 OMA:ISWEHIN PhylomeDB:Q9LQZ2
ProtClustDB:CLSN2714736 Genevestigator:Q9LQZ2 GermOnline:AT1G75490
Uniprot:Q9LQZ2
Length = 206
Score = 110 (43.8 bits), Expect = 0.00065, P = 0.00065
Identities = 36/117 (30%), Positives = 47/117 (40%)
Query: 199 RKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKF 258
R G + Y+GV R G+W A I L+LGTF T YD AA K
Sbjct: 30 RGKGGPDNASCTYKGV-RQRTWGKWVAEIREPNRGARLWLGTFDTSREAALAYDSAARKL 88
Query: 259 RGTSAVTNFDISRYDVKRICSS---STLIASDLAKRSPKDS-APLVLEDYNSCASST 311
G A N S + SS T +S+ +S DS +P + +SC T
Sbjct: 89 YGPEAHLNLPESLRSYPKTASSPASQTTPSSNTGGKSSSDSESPCSSNEMSSCGRVT 145
>TAIR|locus:2029491 [details] [associations]
symbol:RAP2.4 "related to AP2 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IC;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006970 "response to osmotic
stress" evidence=IEP] [GO:0071472 "cellular response to salt
stress" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IEP;IMP] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009873 "ethylene mediated signaling pathway" evidence=IMP]
[GO:0010017 "red or far-red light signaling pathway" evidence=IGI]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0009736
"cytokinin mediated signaling pathway" evidence=IMP] [GO:0045595
"regulation of cell differentiation" evidence=IMP] [GO:0009409
"response to cold" evidence=IEP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009611
GO:GO:0009873 GO:GO:0045595 GO:GO:0009409 GO:GO:0009414
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 KO:K09286
Gene3D:3.30.730.10 SUPFAM:SSF54171 HSSP:O80337 GO:GO:0009736
GO:GO:0071472 GO:GO:0010017 EMBL:AC009243 EMBL:AC012680
HOGENOM:HOG000239817 UniGene:At.25524 EMBL:AF370152 EMBL:AY150468
EMBL:AF003097 IPI:IPI00519366 RefSeq:NP_177931.1 UniGene:At.71798
ProteinModelPortal:Q8H1E4 SMR:Q8H1E4 MINT:MINT-7262714
STRING:Q8H1E4 EnsemblPlants:AT1G78080.1 GeneID:844143
KEGG:ath:AT1G78080 TAIR:At1g78080 eggNOG:NOG306355
InParanoid:Q8H1E4 OMA:KLEAICK PhylomeDB:Q8H1E4
ProtClustDB:CLSN2679481 Genevestigator:Q8H1E4 Uniprot:Q8H1E4
Length = 334
Score = 114 (45.2 bits), Expect = 0.00076, P = 0.00076
Identities = 30/74 (40%), Positives = 39/74 (52%)
Query: 205 SRGASVYRGVTRHHQHGRWQARIGRVAGNKD-LYLGTFSTQXXXXXXYDIAAIKFRGTSA 263
S+ +YRGV + H G+W A I R+ N+ L+LGTF T YD AA K RG A
Sbjct: 146 SKPTKLYRGVRQRHW-GKWVAEI-RLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFA 203
Query: 264 VTNFDISRYDVKRI 277
NF R++ I
Sbjct: 204 RLNFPNLRHNGSHI 217
>TAIR|locus:2183861 [details] [associations]
symbol:Rap2.6L "related to AP2 6l" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0009723 "response to ethylene stimulus" evidence=IEP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0071497 "cellular response to freezing"
evidence=IEP] [GO:0009407 "toxin catabolic process" evidence=RCA]
[GO:0010260 "organ senescence" evidence=RCA] [GO:0010583 "response
to cyclopentenone" evidence=RCA] [GO:0046482 "para-aminobenzoic
acid metabolic process" evidence=RCA] InterPro:IPR001471
InterPro:IPR016177 Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032
SMART:SM00380 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0045893 GO:GO:0009753 GO:GO:0009873
GO:GO:0009723 GO:GO:0003677 GO:GO:0009651 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 GO:GO:0009751 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AL163491 EMBL:AY560861
EMBL:BT011609 EMBL:BT012250 IPI:IPI00516288 PIR:T48580
RefSeq:NP_196837.1 UniGene:At.32083 UniGene:At.67565
UniGene:At.75194 ProteinModelPortal:Q9LYU3 SMR:Q9LYU3 IntAct:Q9LYU3
STRING:Q9LYU3 PaxDb:Q9LYU3 PRIDE:Q9LYU3 EnsemblPlants:AT5G13330.1
GeneID:831174 KEGG:ath:AT5G13330 TAIR:At5g13330 eggNOG:NOG270575
HOGENOM:HOG000112331 InParanoid:Q9LYU3 OMA:PRRRHYR PhylomeDB:Q9LYU3
ProtClustDB:CLSN2916600 Genevestigator:Q9LYU3 GO:GO:0071497
Uniprot:Q9LYU3
Length = 212
Score = 109 (43.4 bits), Expect = 0.00095, P = 0.00095
Identities = 25/57 (43%), Positives = 30/57 (52%)
Query: 211 YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXXYDIAAIKFRGTSAVTNF 267
YRGV R G+W A I ++LGTF T YD AA+KF+GT A NF
Sbjct: 39 YRGV-RQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNF 94
Score = 109 (43.4 bits), Expect = 0.00095, P = 0.00095
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 105 RTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQVYLGGYDKEDKAARAYDLAALKY 164
R YRGV + W G++ A + D +K +V+LG ++ ++AA AYD AALK+
Sbjct: 35 RRRHYRGVRQRPW-GKWAAEIRD--------PKKAARVWLGTFETAEEAALAYDRAALKF 85
Query: 165 WGATTHINFP 174
G +NFP
Sbjct: 86 KGTKAKLNFP 95
>TAIR|locus:2060385 [details] [associations]
symbol:AT2G22200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] InterPro:IPR001471 InterPro:IPR016177
Pfam:PF00847 PRINTS:PR00367 PROSITE:PS51032 SMART:SM00380
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:O80337 EMBL:AC007168 HOGENOM:HOG000239817
EMBL:AY090378 EMBL:AY143836 IPI:IPI00527119 PIR:B84610
RefSeq:NP_179810.1 UniGene:At.39467 ProteinModelPortal:Q9SIE4
SMR:Q9SIE4 EnsemblPlants:AT2G22200.1 GeneID:816754
KEGG:ath:AT2G22200 TAIR:At2g22200 eggNOG:euNOG21323
InParanoid:Q9SIE4 OMA:EFEEIGS PhylomeDB:Q9SIE4
ProtClustDB:CLSN2683732 Genevestigator:Q9SIE4 Uniprot:Q9SIE4
Length = 261
Score = 111 (44.1 bits), Expect = 0.00099, P = 0.00099
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 205 SRGASVYRGVTRHHQHGRWQARIGRVAGNKD-LYLGTFSTQXXXXXXYDIAAIKFRGTSA 263
S+ ++YRGV + H G+W A I R+ N+ L+LGTF T YD AA + RG A
Sbjct: 65 SKTKNLYRGVRQRHW-GKWVAEI-RLPKNRTRLWLGTFETAEKAALAYDQAAFQLRGDIA 122
Query: 264 VTNF-DISRYDVKRICSS 280
NF ++ D+ + SS
Sbjct: 123 KLNFPNLIHEDMNPLPSS 140
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.129 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 429 387 0.00093 117 3 11 23 0.44 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 70
No. of states in DFA: 617 (66 KB)
Total size of DFA: 272 KB (2143 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.89u 0.15s 34.04t Elapsed: 00:00:04
Total cpu time: 33.90u 0.15s 34.05t Elapsed: 00:00:04
Start: Fri May 10 07:04:50 2013 End: Fri May 10 07:04:54 2013