Citrus Sinensis ID: 014211
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 429 | 2.2.26 [Sep-21-2011] | |||||||
| Q8W033 | 550 | Aldehyde dehydrogenase fa | yes | no | 0.853 | 0.665 | 0.686 | 1e-144 | |
| Q70DU8 | 484 | Aldehyde dehydrogenase fa | no | no | 0.822 | 0.729 | 0.671 | 1e-141 | |
| Q8VXQ2 | 479 | Aldehyde dehydrogenase OS | N/A | no | 0.836 | 0.749 | 0.612 | 1e-132 | |
| Q70E96 | 484 | Aldehyde dehydrogenase fa | no | no | 0.799 | 0.708 | 0.505 | 2e-99 | |
| Q5XI42 | 468 | Aldehyde dehydrogenase fa | yes | no | 0.801 | 0.735 | 0.441 | 1e-86 | |
| Q80VQ0 | 468 | Aldehyde dehydrogenase fa | yes | no | 0.801 | 0.735 | 0.444 | 3e-86 | |
| Q1JPA0 | 468 | Aldehyde dehydrogenase fa | no | no | 0.808 | 0.741 | 0.440 | 2e-83 | |
| P11883 | 453 | Aldehyde dehydrogenase, d | no | no | 0.801 | 0.759 | 0.446 | 2e-83 | |
| Q5RF60 | 485 | Fatty aldehyde dehydrogen | yes | no | 0.801 | 0.709 | 0.438 | 1e-82 | |
| P51648 | 485 | Fatty aldehyde dehydrogen | yes | no | 0.801 | 0.709 | 0.438 | 2e-82 |
| >sp|Q8W033|AL3I1_ARATH Aldehyde dehydrogenase family 3 member I1, chloroplastic OS=Arabidopsis thaliana GN=ALDH3I1 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/367 (68%), Positives = 312/367 (85%), Gaps = 1/367 (0%)
Query: 50 CSATMAAEEK-QMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEE 108
C AT++A K Q F ++AA L+ ELR+N+NS +TKSYEWR+SQ+Q+IA MI+EKE+
Sbjct: 55 CYATLSAVVKEQASDFSGKEAALLVDELRSNFNSGRTKSYEWRISQLQNIARMIDEKEKC 114
Query: 109 IIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISE 168
I EA+++DLSKP E F++EIS TKSSC LA+KELK W PE KTS+TT+PSSA+I+SE
Sbjct: 115 ITEALYQDLSKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSE 174
Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAV 228
PLGVVLVIS WN+PFLLS++PVIGAIAAGNAVVLKPSEIAPA SSLLAKL +Y+DN+ +
Sbjct: 175 PLGVVLVISAWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAPAASSLLAKLFSEYLDNTTI 234
Query: 229 RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTI 288
RV+EG V ET+ALL+QKWDKI +TG RV RI+MAAAA++LTPV+LELGGK PA+VDS +
Sbjct: 235 RVIEGGVPETTALLDQKWDKIFFTGGARVARIIMAAAARNLTPVVLELGGKCPALVDSDV 294
Query: 289 NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDL 348
NLQV RRIIAGKW N+GQACIGVDY+ITTKDFA KLID+L+ EL+ FFG+N +ESKDL
Sbjct: 295 NLQVAARRIIAGKWACNSGQACIGVDYVITTKDFASKLIDALKTELETFFGQNALESKDL 354
Query: 349 SRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGP 408
SRIVN FHF RL S+L E+ V++KIV+GG+ E +LKI+PTILLDVP+ S++M+EEIFGP
Sbjct: 355 SRIVNSFHFKRLESMLKENGVANKIVHGGRITEDKLKISPTILLDVPEASSMMQEEIFGP 414
Query: 409 LLPIVTV 415
LLPI+TV
Sbjct: 415 LLPIITV 421
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Involved in oxidative stress tolerance by detoxifying reactive aldehydes derived from lipid peroxidation. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3 |
| >sp|Q70DU8|AL3H1_ARATH Aldehyde dehydrogenase family 3 member H1 OS=Arabidopsis thaliana GN=ALDH3H1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 503 bits (1294), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/353 (67%), Positives = 297/353 (84%)
Query: 64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFE 123
F +A++L+ ELR +++ T+ YEWR++Q++ + + + E EI+ A+ DL KP E
Sbjct: 7 FGSAEASNLVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELE 66
Query: 124 TFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPF 183
+ + E+S+ ++S KLALK+LK W PEKAKTSLTT+P+SAEI+SEPLGVVLVIS WNYPF
Sbjct: 67 SSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPF 126
Query: 184 LLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLE 243
LLS+DPVIGAI+AGNAVVLKPSE+APA+S+LL KLLE Y+D SAVRVVEGAV ETSALLE
Sbjct: 127 LLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAVRVVEGAVTETSALLE 186
Query: 244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
QKWDKI YTGS ++GR++MAAAAKHLTPV+LELGGKSP VVDS +L+VT RRII GKW
Sbjct: 187 QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIVGKWG 246
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
NNGQAC+ DYI+TTK++APKLID+++ EL++F+GKNP+ESKD+SRIVN HF RL+ L
Sbjct: 247 CNNGQACVSPDYILTTKEYAPKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLSKL 306
Query: 364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
LDE +VSDKIVYGG++D + LKIAPTILLDVP DS IM EEIFGPLLPI+T++
Sbjct: 307 LDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLN 359
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Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q8VXQ2|ALDH_CRAPL Aldehyde dehydrogenase OS=Craterostigma plantagineum GN=ALDH PE=1 SV=1 | Back alignment and function description |
|---|
Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/369 (61%), Positives = 288/369 (78%), Gaps = 10/369 (2%)
Query: 61 MQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKP 120
M + D E ++ LR Y S KTKSYEWR+SQ++++ + ++E++EA+ DL KP
Sbjct: 1 MSQVDAE---GVVDGLRRTYISGKTKSYEWRVSQLKALLKITTHHDKEVVEALRADLKKP 57
Query: 121 PFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN 180
E ++ EI M ++CK ALKEL W KP+K KTSL TYPSSAEI+SEPLGVVLVI+ WN
Sbjct: 58 EHEAYVHEIFMVSNACKSALKELHQWMKPQKVKTSLATYPSSAEIVSEPLGVVLVITAWN 117
Query: 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSA 240
YPFLL+LDP+IGAIAAGN VVLKPSEIAPATS+LLAKLL YVD SA+RVVEGAV E A
Sbjct: 118 YPFLLALDPMIGAIAAGNCVVLKPSEIAPATSALLAKLLNQYVDTSAIRVVEGAVPEMQA 177
Query: 241 LLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAG 300
LL+Q+WDKI YTGS +VG+IV+++AAKHLTPV+LELGGK P VVD+ I+L+V RRII+
Sbjct: 178 LLDQRWDKIFYTGSSKVGQIVLSSAAKHLTPVVLELGGKCPTVVDANIDLKVAARRIISW 237
Query: 301 KWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARL 360
KW N+GQ CI DYIITT++ APKL+D+++ EL+ F+GK+P++S+D+S I+N F R+
Sbjct: 238 KWSGNSGQTCISPDYIITTEENAPKLVDAIKCELESFYGKDPLKSQDMSSIINERQFERM 297
Query: 361 ASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSS 420
LLD+ KVSDKIVYGGQ D+ LKIAPTILLDV +DS++M EEIFGPLLPI+TV
Sbjct: 298 TGLLDDKKVSDKIVYGGQSDKSNLKIAPTILLDVSEDSSVMSEEIFGPLLPIITVG---- 353
Query: 421 AHFKLKACF 429
K++ C+
Sbjct: 354 ---KIEECY 359
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Oxidizes nonanal, propionaldehyde and acetaldehyde in vitro, in the following decreasing order of reactivity: nonanal, propionaldehyde, acetaldehyde. Craterostigma plantagineum (taxid: 4153) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q70E96|AL3F1_ARATH Aldehyde dehydrogenase family 3 member F1 OS=Arabidopsis thaliana GN=ALDH3F1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 363 bits (931), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/346 (50%), Positives = 239/346 (69%), Gaps = 3/346 (0%)
Query: 73 MKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMT 132
++E+R + S +T+S +WR +QI +I M+++ E++I A+ +DL K E F E+ +
Sbjct: 12 LREMRETFASGRTRSLKWRKAQIGAIYEMVKDNEDKICNALFQDLGKHSTEAFRDELGVV 71
Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG 192
+ +A+ L W P+ +K L YP+ ++ISEP G VLV+S+WN+P LSLDP+IG
Sbjct: 72 LRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLVLSSWNFPISLSLDPLIG 131
Query: 193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
AIAAGN V+LK SE++P S+ LAK + Y+D A++V+EG + LL+ +WDKI +T
Sbjct: 132 AIAAGNTVLLKSSELSPNASAFLAKTIPAYLDTKAIKVIEGGPDVATILLQHQWDKIFFT 191
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD-STI--NLQVTTRRIIAGKWMANNGQA 309
GSP++GRI+MAAAA+HLTPV LELGGK P +VD TI N++ +RI GKW + NGQA
Sbjct: 192 GSPKIGRIIMAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIAGGKWGSCNGQA 251
Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
CI VDY++ K FAP LID L+ +K FFG+NP ES LSRI N H RL+ LL + +V
Sbjct: 252 CISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQRLSRLLSDPRV 311
Query: 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
IVYGG DE +L + PTILLD P DS IM EEIFGP+LPI+TV
Sbjct: 312 QASIVYGGSIDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITV 357
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Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|Q5XI42|AL3B1_RAT Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus GN=Aldh3b1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 320 bits (821), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 154/349 (44%), Positives = 232/349 (66%), Gaps = 5/349 (1%)
Query: 73 MKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMT 132
+++LR +N+ +T+S E+R +Q+Q +++ + + ++++ EA+ +DL K FE+ +SEI+++
Sbjct: 8 LQQLREAFNAGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFESEVSEIAIS 67
Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG 192
++ LAL+ L+ W K EK +L T SA I EP G+VL+I WNYP L+L P++G
Sbjct: 68 QAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPLNLTLVPLVG 127
Query: 193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
AIAAGN VVLKPSEI+ AT +LA++L Y+D S VV G ET LLE ++D I +T
Sbjct: 128 AIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFAVVLGGPQETGQLLEHRFDYIFFT 187
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
G+ VG+IVMAAAAKHLTP+ LELGGK+P VD + Q R+ ++ N GQ C+
Sbjct: 188 GNTYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQTVANRVAWFRYF-NAGQTCVA 246
Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
DY++ +++ +L+ +L+N + F+G NP S +L RI+N HF RL LL +
Sbjct: 247 PDYVLCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFERLQGLLG----CGR 302
Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
+ GGQ DE + IAPT+L+DV + +M+EEIFGP+LP+VTV+ + A
Sbjct: 303 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVTNLDEA 351
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Oxidizes medium and long chain saturated and unsaturated aldehydes (By similarity). Metabolizes also benzaldehyde (By similarity). Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde (By similarity). May not metabolize short chain aldehydes (By similarity). May use both NADP(+) and NAD(+) as cofactors (By similarity). May have a protective role against the cytotoxicity induced by lipid peroxidation. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|Q80VQ0|AL3B1_MOUSE Aldehyde dehydrogenase family 3 member B1 OS=Mus musculus GN=Aldh3b1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 319 bits (817), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 229/349 (65%), Gaps = 5/349 (1%)
Query: 73 MKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMT 132
+++LR + +T+S E+R +Q+Q +++ + + ++++ EA+ +DL K FE +SEI+++
Sbjct: 8 LQQLREAFKEGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFEAEVSEIAIS 67
Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG 192
++ LAL+ L+ W K EK +L T SA I EP G+VL+I WNYP L+L P++G
Sbjct: 68 QAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPINLTLVPLVG 127
Query: 193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
AIAAGN VVLKPSEI+ AT +LA++L Y+D S VV G ET LLE K+D I +T
Sbjct: 128 AIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFTVVLGGRQETGQLLEHKFDYIFFT 187
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
G+ VG+IVMAAAAKHLTP+ LELGGK+P VD + Q+ R+ ++ N GQ C+
Sbjct: 188 GNAYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQIVANRVAWFRYF-NAGQTCVA 246
Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
DYI+ +++ +L+ +L+N + F+G NP S +L RI+N HF RL LL +
Sbjct: 247 PDYILCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFKRLQGLLG----CGR 302
Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
+ GGQ DE + IAPT+L+DV + +M+EEIFGP+LP+VTV + A
Sbjct: 303 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVRSLDEA 351
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Oxidizes medium and long chain saturated and unsaturated aldehydes (By similarity). Metabolizes also benzaldehyde (By similarity). Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde (By similarity). May not metabolize short chain aldehydes (By similarity). May use both NADP(+) and NAD(+) as cofactors (By similarity). May have a protective role against the cytotoxicity induced by lipid peroxidation. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|Q1JPA0|AL3B1_BOVIN Aldehyde dehydrogenase family 3 member B1 OS=Bos taurus GN=ALDH3B1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 310 bits (793), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/352 (44%), Positives = 225/352 (63%), Gaps = 5/352 (1%)
Query: 70 ASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEI 129
A ++ LR + S +T+ E+R +Q++ ++ + E ++ + EA+ +DL K FE +SEI
Sbjct: 5 ADTLQRLREAFVSGRTRPAEFRDAQLKGLSRFLRENKQLLQEALAQDLHKSAFEAEVSEI 64
Query: 130 SMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDP 189
S++++ LAL+ L+ W K EK +L T SA I EP G+VL++S WNYP LSL P
Sbjct: 65 SISQNEINLALRNLRTWMKDEKVSKNLATQLDSAFIRKEPFGLVLILSPWNYPLNLSLGP 124
Query: 190 VIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKI 249
++GA+AAGN VVLKPSEI+ T +LA++L Y+D S VV G ET LLE K+D I
Sbjct: 125 LVGALAAGNCVVLKPSEISKNTEKVLAEVLPRYLDQSCFAVVLGGPQETGRLLEHKFDYI 184
Query: 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309
+TG+P+VG+IVM AAAKHLTPV LELGGK+P VD + Q R+ + N GQ
Sbjct: 185 FFTGNPQVGKIVMTAAAKHLTPVTLELGGKNPCYVDDNCDPQTVANRVAFFRCF-NAGQT 243
Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
C+ DY++ + + +L+ +L++ + F+G +P S +L RI++ HF RL LL
Sbjct: 244 CVAPDYVLCSPEMQAQLVPALQSAITRFYGDDPQSSPNLGRIISQKHFQRLRGLLS---- 299
Query: 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
++V GGQ DE L IAPT+L+DV + +M+EEIFGP+LPIV V + A
Sbjct: 300 CGRVVIGGQSDECDLYIAPTVLVDVQETDPVMQEEIFGPILPIVNVRSLGQA 351
|
Oxidizes medium and long chain saturated and unsaturated aldehydes (By similarity). Metabolizes also benzaldehyde (By similarity). Low activity towards acetaldehyde and 3,4-dihydroxyphenylacetaldehyde (By similarity). May not metabolize short chain aldehydes (By similarity). May use both NADP(+) and NAD(+) as cofactors (By similarity). May have a protective role against the cytotoxicity induced by lipid peroxidation. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|P11883|AL3A1_RAT Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus GN=Aldh3a1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 309 bits (792), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 224/349 (64%), Gaps = 5/349 (1%)
Query: 73 MKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMT 132
+K R +NS KT+S ++R+ Q++++ MI E + I A+ DL K + ++ E++
Sbjct: 8 VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 67
Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG 192
+KEL W + E + T I SEPLGVVLVI WNYPF L++ P++G
Sbjct: 68 LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 127
Query: 193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
A+AAGNAV+LKPSE++ + LLA L+ Y+D + VV+G V ET+ LL++++D I+YT
Sbjct: 128 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 187
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
GS VG+IVMAAAAKHLTPV LELGGKSP VD +L V RRI GK+M N+GQ C+
Sbjct: 188 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM-NSGQTCVA 246
Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
DYI+ ++++ L+ LK+F+G++ +S+D RI+N HF R+ L+D KV+
Sbjct: 247 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA-- 304
Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
+GG D+ IAPTIL+DV S +M+EEIFGP++PIV V + A
Sbjct: 305 --HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEA 351
|
ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 |
| >sp|Q5RF60|AL3A2_PONAB Fatty aldehyde dehydrogenase OS=Pongo abelii GN=ALDH3A2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 307 bits (786), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/349 (43%), Positives = 221/349 (63%), Gaps = 5/349 (1%)
Query: 73 MKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMT 132
++ +R + S +++ +R+ Q++++ M++E+E++I+ AI DL K F + E+
Sbjct: 5 VRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILAAIAADLCKSEFNVYSQEVITV 64
Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG 192
L+ L W + K ++ T A I +PLGVVL+I WNYPF+L++ P+IG
Sbjct: 65 LGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQPLIG 124
Query: 193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
AIAAGNAV++KPSE++ T+ +LAKLL Y+D V+ G V ET+ LL+Q++D I YT
Sbjct: 125 AIAAGNAVIIKPSELSENTAKMLAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHIFYT 184
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
G+ VG+IVM AAAKHLTPV LELGGKSP +D +L + RRI GK+M N GQ CI
Sbjct: 185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKYM-NCGQTCIA 243
Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
DYI+ +++ ++ +KEF+G+N ES D RI+N HF R+ SLL+ K
Sbjct: 244 PDYILCEASLQNQIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLE----GQK 299
Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
I +GG+ DE IAPT+L DV + +M+EEIFGP+LPIV V V A
Sbjct: 300 IAFGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPILPIVPVKNVDEA 348
|
Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
| >sp|P51648|AL3A2_HUMAN Fatty aldehyde dehydrogenase OS=Homo sapiens GN=ALDH3A2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 153/349 (43%), Positives = 221/349 (63%), Gaps = 5/349 (1%)
Query: 73 MKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMT 132
++ +R + S +++ +R+ Q++++ M++E+E++I+ AI DL K F + E+
Sbjct: 5 VRRVRQAFLSGRSRPLRFRLQQLEALRRMVQEREKDILTAIAADLCKSEFNVYSQEVITV 64
Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG 192
L+ L W + K ++ T A I +PLGVVL+I WNYPF+L++ P+IG
Sbjct: 65 LGEIDFMLENLPEWVTAKPVKKNVLTMLDEAYIQPQPLGVVLIIGAWNYPFVLTIQPLIG 124
Query: 193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
AIAAGNAV++KPSE++ T+ +LAKLL Y+D V+ G V ET+ LL+Q++D I YT
Sbjct: 125 AIAAGNAVIIKPSELSENTAKILAKLLPQYLDQDLYIVINGGVEETTELLKQRFDHIFYT 184
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
G+ VG+IVM AAAKHLTPV LELGGKSP +D +L + RRI GK+M N GQ CI
Sbjct: 185 GNTAVGKIVMEAAAKHLTPVTLELGGKSPCYIDKDCDLDIVCRRITWGKYM-NCGQTCIA 243
Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
DYI+ +++ ++ +KEF+G+N ES D RI+N HF R+ SLL+ K
Sbjct: 244 PDYILCEASLQNQIVWKIKETVKEFYGENIKESPDYERIINLRHFKRILSLLE----GQK 299
Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
I +GG+ DE IAPT+L DV + +M+EEIFGP+LPIV V V A
Sbjct: 300 IAFGGETDEATRYIAPTVLTDVDPKTKVMQEEIFGPILPIVPVKNVDEA 348
|
Catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Active on a variety of saturated and unsaturated aliphatic aldehydes between 6 and 24 carbons in length. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 3 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 429 | ||||||
| 359480760 | 549 | PREDICTED: aldehyde dehydrogenase family | 0.871 | 0.681 | 0.761 | 1e-167 | |
| 296082609 | 548 | unnamed protein product [Vitis vinifera] | 0.871 | 0.682 | 0.761 | 1e-166 | |
| 356526936 | 541 | PREDICTED: aldehyde dehydrogenase family | 0.925 | 0.733 | 0.690 | 1e-159 | |
| 357520121 | 550 | Aldehyde dehydrogenase family 3 member H | 0.930 | 0.725 | 0.678 | 1e-158 | |
| 224083522 | 488 | predicted protein [Populus trichocarpa] | 0.841 | 0.739 | 0.731 | 1e-154 | |
| 147771560 | 541 | hypothetical protein VITISV_044129 [Viti | 0.853 | 0.676 | 0.724 | 1e-153 | |
| 224082306 | 488 | predicted protein [Populus trichocarpa] | 0.846 | 0.743 | 0.719 | 1e-153 | |
| 356503028 | 496 | PREDICTED: aldehyde dehydrogenase family | 0.820 | 0.709 | 0.727 | 1e-153 | |
| 356552697 | 487 | PREDICTED: aldehyde dehydrogenase family | 0.843 | 0.743 | 0.718 | 1e-153 | |
| 356552695 | 496 | PREDICTED: aldehyde dehydrogenase family | 0.820 | 0.709 | 0.730 | 1e-152 |
| >gi|359480760|ref|XP_002273730.2| PREDICTED: aldehyde dehydrogenase family 3 member I1, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 592 bits (1527), Expect = e-167, Method: Compositional matrix adjust.
Identities = 287/377 (76%), Positives = 333/377 (88%), Gaps = 3/377 (0%)
Query: 41 LSLTSFSCRCSATMA--AEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98
L T S CSAT+A A+EK+ + FDVE AASL+KELR ++N+ KTKSYEWR++Q++ I
Sbjct: 46 LRFTHSSFICSATLAVMADEKK-KVFDVESAASLVKELRGSFNAGKTKSYEWRIAQLKGI 104
Query: 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTT 158
MI+E+E++IIEA+H+DLSKP E F+SEISM+K +CKLALKEL +W KPEKAKTS+TT
Sbjct: 105 EKMIDEREKDIIEALHEDLSKPELEAFVSEISMSKGACKLALKELGHWMKPEKAKTSMTT 164
Query: 159 YPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL 218
YPSSAEI+SEPLGVVLVISTWNYP LLS+DPVIGAIAAGNAVVLKPSEIAPATS+LL+KL
Sbjct: 165 YPSSAEIVSEPLGVVLVISTWNYPLLLSIDPVIGAIAAGNAVVLKPSEIAPATSTLLSKL 224
Query: 219 LEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 278
LE+Y+DNS++RVVEGAVAET+ALLEQKWDKI YTGSPRVGRIVMAAAAKHLTPV LELGG
Sbjct: 225 LEEYLDNSSIRVVEGAVAETTALLEQKWDKIFYTGSPRVGRIVMAAAAKHLTPVTLELGG 284
Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
K P VVDS +NLQV RR+IAGKW NNGQACI DYIITTKDFAPKLID LR+EL+EFF
Sbjct: 285 KCPVVVDSNVNLQVAARRLIAGKWACNNGQACISPDYIITTKDFAPKLIDVLRHELEEFF 344
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDS 398
GKNP+ES+D+SRIV+ HF RL LLDED+VSDKI+ GGQ DE QLKIAPTIL+DVP+D+
Sbjct: 345 GKNPIESEDMSRIVSVQHFKRLTRLLDEDEVSDKIIIGGQSDENQLKIAPTILVDVPEDT 404
Query: 399 TIMKEEIFGPLLPIVTV 415
IMKEEIFGPLLPI+TV
Sbjct: 405 EIMKEEIFGPLLPILTV 421
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296082609|emb|CBI21614.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 287/377 (76%), Positives = 333/377 (88%), Gaps = 3/377 (0%)
Query: 41 LSLTSFSCRCSATMA--AEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98
L T S CSAT+A A+EK+ + FDVE AASL+KELR ++N+ KTKSYEWR++Q++ I
Sbjct: 45 LRFTHSSFICSATLAVMADEKK-KVFDVESAASLVKELRGSFNAGKTKSYEWRIAQLKGI 103
Query: 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTT 158
MI+E+E++IIEA+H+DLSKP E F+SEISM+K +CKLALKEL +W KPEKAKTS+TT
Sbjct: 104 EKMIDEREKDIIEALHEDLSKPELEAFVSEISMSKGACKLALKELGHWMKPEKAKTSMTT 163
Query: 159 YPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL 218
YPSSAEI+SEPLGVVLVISTWNYP LLS+DPVIGAIAAGNAVVLKPSEIAPATS+LL+KL
Sbjct: 164 YPSSAEIVSEPLGVVLVISTWNYPLLLSIDPVIGAIAAGNAVVLKPSEIAPATSTLLSKL 223
Query: 219 LEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 278
LE+Y+DNS++RVVEGAVAET+ALLEQKWDKI YTGSPRVGRIVMAAAAKHLTPV LELGG
Sbjct: 224 LEEYLDNSSIRVVEGAVAETTALLEQKWDKIFYTGSPRVGRIVMAAAAKHLTPVTLELGG 283
Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
K P VVDS +NLQV RR+IAGKW NNGQACI DYIITTKDFAPKLID LR+EL+EFF
Sbjct: 284 KCPVVVDSNVNLQVAARRLIAGKWACNNGQACISPDYIITTKDFAPKLIDVLRHELEEFF 343
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDS 398
GKNP+ES+D+SRIV+ HF RL LLDED+VSDKI+ GGQ DE QLKIAPTIL+DVP+D+
Sbjct: 344 GKNPIESEDMSRIVSVQHFKRLTRLLDEDEVSDKIIIGGQSDENQLKIAPTILVDVPEDT 403
Query: 399 TIMKEEIFGPLLPIVTV 415
IMKEEIFGPLLPI+TV
Sbjct: 404 EIMKEEIFGPLLPILTV 420
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356526936|ref|XP_003532071.1| PREDICTED: aldehyde dehydrogenase family 3 member I1, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/397 (69%), Positives = 332/397 (83%)
Query: 31 KNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEW 90
+ Q H ++ +SF C + ++ E ++ Q FD EKA L+K+LR +++S TKSY W
Sbjct: 31 QKQLHFHSRCVAFSSFICSATISVMPELEEKQVFDGEKANLLVKDLRKSFDSGMTKSYGW 90
Query: 91 RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
R+SQ+++IA M+EEKE+EI EA++KDL KP E FI+EIS KSSC ALKELK W KPE
Sbjct: 91 RVSQLEAIAKMLEEKEKEITEALYKDLGKPRLEAFITEISQAKSSCSEALKELKEWMKPE 150
Query: 151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPA 210
K TS+TTYPSSAEI+ EPLGVVLVISTWN+PFLLS+DPVIGAI+AGNAVVLKPSEI+PA
Sbjct: 151 KVNTSITTYPSSAEIVPEPLGVVLVISTWNFPFLLSMDPVIGAISAGNAVVLKPSEISPA 210
Query: 211 TSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLT 270
TSSLLA L+E Y+DNS +RVVEGA+ ETSALL+QKWDKILYTGS RVGRIVMAAAAKHLT
Sbjct: 211 TSSLLANLIEQYLDNSTIRVVEGAIPETSALLDQKWDKILYTGSARVGRIVMAAAAKHLT 270
Query: 271 PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330
PVILELGGK PAVV+S +NLQVT RRIIAGKW N+GQACI VDYIIT K+FAPKL+D+L
Sbjct: 271 PVILELGGKCPAVVESDVNLQVTARRIIAGKWACNSGQACISVDYIITRKEFAPKLVDAL 330
Query: 331 RNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTI 390
+ EL++FFGK+PMESKD+SRIV+P FARL +LLDEDKVSDKIV GGQRDEK+LKIAPTI
Sbjct: 331 KEELEQFFGKDPMESKDMSRIVSPNQFARLVNLLDEDKVSDKIVLGGQRDEKKLKIAPTI 390
Query: 391 LLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKA 427
+L VP+D+ IM+EEIFGP++PIVTV + + +K+
Sbjct: 391 ILGVPEDAMIMQEEIFGPIMPIVTVDNIEDCYSIIKS 427
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357520121|ref|XP_003630349.1| Aldehyde dehydrogenase family 3 member H1 [Medicago truncatula] gi|355524371|gb|AET04825.1| Aldehyde dehydrogenase family 3 member H1 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 272/401 (67%), Positives = 330/401 (82%), Gaps = 2/401 (0%)
Query: 20 NKSFIYNYTYR--KNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELR 77
+ F N T + Q H + + S C + ++ +E ++ Q FD EKA L++ELR
Sbjct: 18 GRDFANNLTTKCFPKQLHFNSRSVVFASHLCYATLSVESEAEKKQVFDGEKAYLLVRELR 77
Query: 78 NNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCK 137
N+++ KTKSYEWR+SQ+++I M+EEKE+EII+A+H DLSKP E +I+EI KSSC
Sbjct: 78 KNFDTGKTKSYEWRISQLEAIVKMLEEKEKEIIDALHTDLSKPRLEAYITEIVQAKSSCD 137
Query: 138 LALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAG 197
AL+ELK+W KPEK TS+T +PSSAEI+SEPLGVVL+ISTWN+P LLSLDPVIGAI+AG
Sbjct: 138 EALQELKHWMKPEKVSTSITAFPSSAEIVSEPLGVVLIISTWNFPMLLSLDPVIGAISAG 197
Query: 198 NAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRV 257
NAVVLKPSE++PATSSLLA LLE Y+DNSAVRVVEGAV ET+ALL+QKWDKILYTGS RV
Sbjct: 198 NAVVLKPSEVSPATSSLLANLLESYLDNSAVRVVEGAVPETTALLDQKWDKILYTGSARV 257
Query: 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317
GRIVMAAAAKHLTPVILELGGK PAVVDS +NLQ T RRIIAGKW N+GQ CI VDYII
Sbjct: 258 GRIVMAAAAKHLTPVILELGGKCPAVVDSNVNLQFTARRIIAGKWACNSGQTCISVDYII 317
Query: 318 TTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGG 377
TTKDFAP L+D+L+ EL++FFGK+ +ESKD+SRIV+P +ARL LLDEDKVSDKIV GG
Sbjct: 318 TTKDFAPTLVDALKEELEQFFGKDLIESKDMSRIVSPTQYARLVKLLDEDKVSDKIVLGG 377
Query: 378 QRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIV 418
QRDEK+LKIAPTILLDVP ++ +M+EEIFGP+LPI+TVS +
Sbjct: 378 QRDEKKLKIAPTILLDVPQEAMVMQEEIFGPILPIITVSTI 418
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224083522|ref|XP_002307060.1| predicted protein [Populus trichocarpa] gi|222856509|gb|EEE94056.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/361 (73%), Positives = 312/361 (86%)
Query: 58 EKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDL 117
E + Q FD +A SL+KEL+ ++ + +T+SYEWR+SQ++ I M+EE+E++I EA++KDL
Sbjct: 3 EGKKQPFDANEAPSLVKELKESFRTGRTRSYEWRVSQLKGIEKMVEEREKDISEALYKDL 62
Query: 118 SKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177
SKP FE F+SEI+ KSSC+ ALKELK W KPEKAKTS+T YPSSAEI+SEPLG VLVIS
Sbjct: 63 SKPEFEAFVSEIAAVKSSCEEALKELKQWMKPEKAKTSMTAYPSSAEIVSEPLGAVLVIS 122
Query: 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAE 237
TWNYPFLLS+DPVIGAIAAGNAVVLKPSEIAP TSSLL++L E+Y+D+SAVRVVEGAV E
Sbjct: 123 TWNYPFLLSIDPVIGAIAAGNAVVLKPSEIAPVTSSLLSELFEEYLDSSAVRVVEGAVPE 182
Query: 238 TSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRI 297
T+ALLEQKWDKI YTGSPRVGRIVM AAAKHLTPV+LELGGK P VVDS ++LQVT RRI
Sbjct: 183 TAALLEQKWDKIFYTGSPRVGRIVMTAAAKHLTPVVLELGGKCPVVVDSDVDLQVTARRI 242
Query: 298 IAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHF 357
IAGKW NNGQACI VDYII TKDFAPKLID+LRN ++EFFG +PMESK +SRIV+ HF
Sbjct: 243 IAGKWQLNNGQACISVDYIIATKDFAPKLIDALRNGIEEFFGADPMESKYISRIVSSNHF 302
Query: 358 ARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSI 417
+RL LLDE KV +KIV GGQR++K+LKIAPTI LDVP+DS +M+EEIFGPLLPI+TV
Sbjct: 303 SRLERLLDEYKVFNKIVVGGQRNQKKLKIAPTIFLDVPEDSQLMQEEIFGPLLPIITVEN 362
Query: 418 V 418
V
Sbjct: 363 V 363
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147771560|emb|CAN73659.1| hypothetical protein VITISV_044129 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 273/377 (72%), Positives = 319/377 (84%), Gaps = 11/377 (2%)
Query: 41 LSLTSFSCRCSATMA--AEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98
L T S CSAT+A A+EK+ + FDVE AASL+KELR ++N+ KTKSYEWR++Q++ I
Sbjct: 46 LRFTHSSFICSATLAVMADEKK-KVFDVESAASLVKELRGSFNAGKTKSYEWRIAQLKGI 104
Query: 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTT 158
MI+E+E++IIEA+H+DLSKP E F+SEISM+K +CKLALKEL +W KPEKAKTS+TT
Sbjct: 105 EKMIDEREKDIIEALHEDLSKPELEAFVSEISMSKGACKLALKELGHWMKPEKAKTSMTT 164
Query: 159 YPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL 218
YPSSAEI+SEPLGVVLVISTWNYP LLS+DPVIGAIAAGNAVVLKPSEIAPATS+LL+KL
Sbjct: 165 YPSSAEIVSEPLGVVLVISTWNYPLLLSIDPVIGAIAAGNAVVLKPSEIAPATSTLLSKL 224
Query: 219 LEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGG 278
LE+Y+DNS++RVVEGAVAET+ALLEQKWDKI YTGSPRVGRIVMAAAAKHLTPV LELGG
Sbjct: 225 LEEYLDNSSIRVVEGAVAETTALLEQKWDKIFYTGSPRVGRIVMAAAAKHLTPVTLELGG 284
Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
K P VVDS +NLQ I + DYIITTKDFAPKLID LR+EL+EFF
Sbjct: 285 KCPVVVDSNVNLQXXGHAI--------XDKLAFLPDYIITTKDFAPKLIDVLRHELEEFF 336
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDS 398
GKNP+ES+D+SRIV+ HF RL LLDED+VSDKI+ GGQ DE QLKIAPTIL+DVP+D+
Sbjct: 337 GKNPIESEDMSRIVSVQHFKRLTRLLDEDEVSDKIIIGGQSDENQLKIAPTILVDVPEDT 396
Query: 399 TIMKEEIFGPLLPIVTV 415
IMKEEIFGPLLPI+TV
Sbjct: 397 EIMKEEIFGPLLPILTV 413
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224082306|ref|XP_002306641.1| predicted protein [Populus trichocarpa] gi|222856090|gb|EEE93637.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/363 (71%), Positives = 311/363 (85%)
Query: 54 MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAI 113
MA +E++ FDVE A L KELR+ + S KT+SYEWR+SQ++SI M +E EE+I++A+
Sbjct: 1 MATKEEENTVFDVEAANVLTKELRDVFASGKTRSYEWRISQLKSIVKMCDEHEEDIVDAL 60
Query: 114 HKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV 173
+DLSKP E+ + E++M K+SC LA+KELK+W PEKAKTSLTT+PSSAEI+SEPLG V
Sbjct: 61 RQDLSKPQLESIVYELTMVKNSCTLAIKELKHWMMPEKAKTSLTTFPSSAEIVSEPLGAV 120
Query: 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG 233
L+IS WNYPFLLS+DP+IGAIAAGNA+VLKPSE+APATSSLLAKLL +Y+D S+++VVEG
Sbjct: 121 LIISAWNYPFLLSMDPLIGAIAAGNAMVLKPSEVAPATSSLLAKLLPEYLDCSSIKVVEG 180
Query: 234 AVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVT 293
AV+ETSALLEQKWDKI YTG+ RVGRIVMAAAAKHLTPV+LELGGKSP VVDS I++Q+
Sbjct: 181 AVSETSALLEQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSGIDIQIA 240
Query: 294 TRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVN 353
TRRII GKW NNGQACI DYIITTKD A KL+DSL+ EL+ F+GKNP+ESKDLSRIVN
Sbjct: 241 TRRIIVGKWGCNNGQACISPDYIITTKDCAEKLVDSLKKELEAFYGKNPLESKDLSRIVN 300
Query: 354 PFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413
HF+RL LLDEDKVS KIVYGG+RDE L+IAPTILL VP +S IMKEEIFGPLLPI+
Sbjct: 301 SNHFSRLTKLLDEDKVSGKIVYGGERDEANLRIAPTILLGVPQNSLIMKEEIFGPLLPIL 360
Query: 414 TVS 416
TVS
Sbjct: 361 TVS 363
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356503028|ref|XP_003520314.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/352 (72%), Positives = 303/352 (86%)
Query: 64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFE 123
FD E A+ L+ ELR N+ S KT+SYEWR+SQ+ ++ ++ E+EI++A+ DL KPP E
Sbjct: 20 FDAEAASRLVNELRRNFASNKTRSYEWRLSQLNALEKLVVVHEQEIVDALRNDLGKPPLE 79
Query: 124 TFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPF 183
T EI+M K+SC++ALKELK+W PEK KTS+ T+PSSAEI+SEPLGVVLVIS WNYPF
Sbjct: 80 TVAYEIAMLKNSCRIALKELKHWMTPEKVKTSIATFPSSAEIVSEPLGVVLVISAWNYPF 139
Query: 184 LLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLE 243
LLSLDPV+GAIAAGNAVVLKPSEIAPATSSLLAKL+ DY+DNS +RVVEGAV ETSALL+
Sbjct: 140 LLSLDPVVGAIAAGNAVVLKPSEIAPATSSLLAKLIGDYLDNSCIRVVEGAVDETSALLQ 199
Query: 244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
QKWDKI YTG+ RV RIVMAAA+KHLTPV+LELGGKSP VVDS INL+V TRRIIAGKW
Sbjct: 200 QKWDKIFYTGNGRVARIVMAAASKHLTPVVLELGGKSPVVVDSNINLKVATRRIIAGKWG 259
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
+NNGQACI DYIITTKD+APKL+D+L+ EL++F+GKNP+ESKDLSR+VN HF RL L
Sbjct: 260 SNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRVVNSNHFNRLTKL 319
Query: 364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
LD+DKVS KIVYGGQ+DE +LKI+PT+LLDVP DS IM EEIFGPLLPI+TV
Sbjct: 320 LDDDKVSGKIVYGGQKDENKLKISPTVLLDVPRDSLIMNEEIFGPLLPILTV 371
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552697|ref|XP_003544699.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/362 (71%), Positives = 309/362 (85%)
Query: 54 MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAI 113
MA+ K FD E+A ++KELR ++ KT+SYEWR+SQ+++I + EE E++I +A+
Sbjct: 1 MASNTKSKALFDSEEALMMVKELRVTFDCGKTRSYEWRISQLKAIIKLTEENEQQIYQAL 60
Query: 114 HKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV 173
H DLSK E F+ EI+M K+SC++ALKELK+W PEK KTS+ T+PSSAEI+SEPLGVV
Sbjct: 61 HSDLSKCETEAFVQEIAMLKNSCRIALKELKHWMTPEKVKTSIATFPSSAEIVSEPLGVV 120
Query: 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG 233
LVIS WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL DY+DNS ++VVEG
Sbjct: 121 LVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGDYLDNSCIKVVEG 180
Query: 234 AVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVT 293
AV ETSALL+QKWDKI YTG+ RV RIVMAAA+KHLTPV+LELGGKSP VVDS INL+V
Sbjct: 181 AVDETSALLQQKWDKIFYTGNGRVARIVMAAASKHLTPVVLELGGKSPVVVDSNINLKVA 240
Query: 294 TRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVN 353
TRRIIAGKW +NNGQACI DYIITTKD+APKL+D+L+ EL++F+GKNP+ESKDLSRIVN
Sbjct: 241 TRRIIAGKWGSNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRIVN 300
Query: 354 PFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413
HF RL LLD+DKVS KIVYGG++DE +LKI+PT+LLDVP DS IM EEIFGPLLPI+
Sbjct: 301 SNHFNRLTKLLDDDKVSGKIVYGGEKDESKLKISPTVLLDVPRDSLIMNEEIFGPLLPIL 360
Query: 414 TV 415
TV
Sbjct: 361 TV 362
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356552695|ref|XP_003544698.1| PREDICTED: aldehyde dehydrogenase family 3 member H1-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 257/352 (73%), Positives = 303/352 (86%)
Query: 64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFE 123
FD A+ L+ ELR N+ S KT+SYEWR+ Q+ +IA ++ + E+EI++A+ DL KPP E
Sbjct: 20 FDALAASRLVTELRGNFASGKTRSYEWRLLQLNAIAKLVVDHEQEIVDALRNDLGKPPLE 79
Query: 124 TFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPF 183
T EI+M K+SC++ALKELK+W PEK KTS+ T+PSSAEI+SEPLGVVLVIS WNYPF
Sbjct: 80 TVAYEIAMLKNSCRIALKELKHWMTPEKVKTSIATFPSSAEIVSEPLGVVLVISAWNYPF 139
Query: 184 LLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLE 243
LLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL DY+DNS ++VVEGAV ETSALL+
Sbjct: 140 LLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGDYLDNSCIKVVEGAVDETSALLQ 199
Query: 244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
QKWDKI YTG+ RV RIVMAAA+KHLTPV+LELGGKSP VVDS INL+V TRRIIAGKW
Sbjct: 200 QKWDKIFYTGNGRVARIVMAAASKHLTPVVLELGGKSPVVVDSNINLKVATRRIIAGKWG 259
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
+NNGQACI DYIITTKD+APKL+D+L+ EL++F+GKNP+ESKDLSRIVN HF RL L
Sbjct: 260 SNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRIVNSNHFNRLTKL 319
Query: 364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
LD+DKVS KIVYGG++DE +LKI+PT+LLDVP DS IM EEIFGPLLPI+TV
Sbjct: 320 LDDDKVSGKIVYGGEKDESKLKISPTVLLDVPRDSLIMNEEIFGPLLPILTV 371
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 429 | ||||||
| TAIR|locus:2116134 | 550 | ALDH3I1 "AT4G34240" [Arabidops | 0.853 | 0.665 | 0.634 | 4e-122 | |
| TAIR|locus:2205851 | 484 | ALDH3H1 "AT1G44170" [Arabidops | 0.822 | 0.729 | 0.628 | 8.8e-118 | |
| TAIR|locus:2122224 | 484 | ALDH3F1 "AT4G36250" [Arabidops | 0.813 | 0.721 | 0.465 | 1.5e-81 | |
| RGD|2088 | 453 | Aldh3a1 "aldehyde dehydrogenas | 0.801 | 0.759 | 0.412 | 6.3e-69 | |
| RGD|1359546 | 468 | Aldh3b1 "aldehyde dehydrogenas | 0.801 | 0.735 | 0.409 | 8e-69 | |
| UNIPROTKB|Q5XI42 | 468 | Aldh3b1 "Aldehyde dehydrogenas | 0.801 | 0.735 | 0.409 | 8e-69 | |
| MGI|MGI:1914939 | 468 | Aldh3b1 "aldehyde dehydrogenas | 0.801 | 0.735 | 0.412 | 1.7e-68 | |
| UNIPROTKB|I6L6E1 | 410 | SSC.15124 "Aldehyde dehydrogen | 0.794 | 0.831 | 0.416 | 3.5e-68 | |
| RGD|1584166 | 463 | Aldh3b2 "aldehyde dehydrogenas | 0.794 | 0.736 | 0.416 | 3.5e-68 | |
| UNIPROTKB|F1LT79 | 444 | LOC100365083 "Aldehyde dehydro | 0.801 | 0.774 | 0.412 | 4.4e-68 |
| TAIR|locus:2116134 ALDH3I1 "AT4G34240" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1201 (427.8 bits), Expect = 4.0e-122, P = 4.0e-122
Identities = 233/367 (63%), Positives = 290/367 (79%)
Query: 50 CSATMAAEEK-QMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXX 108
C AT++A K Q F ++AA L+ ELR+N+NS +TKSYEWR+SQ+Q+IA M
Sbjct: 55 CYATLSAVVKEQASDFSGKEAALLVDELRSNFNSGRTKSYEWRISQLQNIARMIDEKEKC 114
Query: 109 XXXXXHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISE 168
++DLSKP E F++EIS TKSSC LA+KELK W PE KTS+TT+PSSA+I+SE
Sbjct: 115 ITEALYQDLSKPELEAFLAEISNTKSSCMLAIKELKNWMAPETVKTSVTTFPSSAQIVSE 174
Query: 169 PLGVVLVISTWNYPFLLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAV 228
PLGVVLVIS WN+PFLLS++P LKPSEIAPA SSLLAKL +Y+DN+ +
Sbjct: 175 PLGVVLVISAWNFPFLLSVEPVIGAIAAGNAVVLKPSEIAPAASSLLAKLFSEYLDNTTI 234
Query: 229 RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTI 288
RV+EG V ET+ALL+QKWDKI +TG RV RI+MAAAA++LTPV+LELGGK PA+VDS +
Sbjct: 235 RVIEGGVPETTALLDQKWDKIFFTGGARVARIIMAAAARNLTPVVLELGGKCPALVDSDV 294
Query: 289 NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDL 348
NLQV RRIIAGKW N+GQACIGVDY+ITTKDFA KLID+L+ EL+ FFG+N +ESKDL
Sbjct: 295 NLQVAARRIIAGKWACNSGQACIGVDYVITTKDFASKLIDALKTELETFFGQNALESKDL 354
Query: 349 SRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGP 408
SRIVN FHF RL S+L E+ V++KIV+GG+ E +LKI+PTILLDVP+ S++M+EEIFGP
Sbjct: 355 SRIVNSFHFKRLESMLKENGVANKIVHGGRITEDKLKISPTILLDVPEASSMMQEEIFGP 414
Query: 409 LLPIVTV 415
LLPI+TV
Sbjct: 415 LLPIITV 421
|
|
| TAIR|locus:2205851 ALDH3H1 "AT1G44170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
Identities = 222/353 (62%), Positives = 278/353 (78%)
Query: 64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFE 123
F +A++L+ ELR +++ T+ YEWR++Q++ + + DL KP E
Sbjct: 7 FGSAEASNLVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELE 66
Query: 124 TFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPF 183
+ + E+S+ ++S KLALK+LK W PEKAKTSLTT+P+SAEI+SEPLGVVLVIS WNYPF
Sbjct: 67 SSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPF 126
Query: 184 LLSLDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLE 243
LLS+DP LKPSE+APA+S+LL KLLE Y+D SAVRVVEGAV ETSALLE
Sbjct: 127 LLSIDPVIGAISAGNAVVLKPSELAPASSALLTKLLEQYLDPSAVRVVEGAVTETSALLE 186
Query: 244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
QKWDKI YTGS ++GR++MAAAAKHLTPV+LELGGKSP VVDS +L+VT RRII GKW
Sbjct: 187 QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIVGKWG 246
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
NNGQAC+ DYI+TTK++APKLID+++ EL++F+GKNP+ESKD+SRIVN HF RL+ L
Sbjct: 247 CNNGQACVSPDYILTTKEYAPKLIDAMKLELEKFYGKNPIESKDMSRIVNSNHFDRLSKL 306
Query: 364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
LDE +VSDKIVYGG++D + LKIAPTILLDVP DS IM EEIFGPLLPI+T++
Sbjct: 307 LDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLN 359
|
|
| TAIR|locus:2122224 ALDH3F1 "AT4G36250" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 164/352 (46%), Positives = 220/352 (62%)
Query: 67 EKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFI 126
E ++E+R + S +T+S +WR +QI +I M +DL K E F
Sbjct: 6 ETVEESLREMRETFASGRTRSLKWRKAQIGAIYEMVKDNEDKICNALFQDLGKHSTEAFR 65
Query: 127 SEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLS 186
E+ + + +A+ L W P+ +K L YP+ ++ISEP G VLV+S+WN+P LS
Sbjct: 66 DELGVVLRTATVAINCLDKWAVPKHSKLPLLFYPAKGKVISEPYGTVLVLSSWNFPISLS 125
Query: 187 LDPXXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKW 246
LDP LK SE++P S+ LAK + Y+D A++V+EG + LL+ +W
Sbjct: 126 LDPLIGAIAAGNTVLLKSSELSPNASAFLAKTIPAYLDTKAIKVIEGGPDVATILLQHQW 185
Query: 247 DKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS-TI--NLQVTTRRIIAGKWM 303
DKI +TGSP++GRI+MAAAA+HLTPV LELGGK P +VD TI N++ +RI GKW
Sbjct: 186 DKIFFTGSPKIGRIIMAAAAQHLTPVTLELGGKCPTIVDHHTISKNIKSVVKRIAGGKWG 245
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
+ NGQACI VDY++ K FAP LID L+ +K FFG+NP ES LSRI N H RL+ L
Sbjct: 246 SCNGQACISVDYVLIEKSFAPTLIDMLKPTIKSFFGENPKESGCLSRIANKHHVQRLSRL 305
Query: 364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
L + +V IVYGG DE +L + PTILLD P DS IM EEIFGP+LPI+TV
Sbjct: 306 LSDPRVQASIVYGGSIDEDKLYVEPTILLDPPLDSEIMNEEIFGPILPIITV 357
|
|
| RGD|2088 Aldh3a1 "aldehyde dehydrogenase 3 family, member A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 144/349 (41%), Positives = 206/349 (59%)
Query: 73 MKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMT 132
+K R +NS KT+S ++R+ Q++++ M DL K + ++ E++
Sbjct: 8 VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHV 67
Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXX 192
+KEL W + E + T I SEPLGVVLVI WNYPF L++ P
Sbjct: 68 LEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVG 127
Query: 193 XXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
LKPSE++ + LLA L+ Y+D + VV+G V ET+ LL++++D I+YT
Sbjct: 128 AVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKERFDHIMYT 187
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
GS VG+IVMAAAAKHLTPV LELGGKSP VD +L V RRI GK+M N+GQ C+
Sbjct: 188 GSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM-NSGQTCVA 246
Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
DYI+ ++++ L+ LK+F+G++ +S+D RI+N HF R+ L+D KV+
Sbjct: 247 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVA-- 304
Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
+GG D+ IAPTIL+DV S +M+EEIFGP++PIV V + A
Sbjct: 305 --HGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEA 351
|
|
| RGD|1359546 Aldh3b1 "aldehyde dehydrogenase 3 family, member B1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 143/349 (40%), Positives = 212/349 (60%)
Query: 73 MKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMT 132
+++LR +N+ +T+S E+R +Q+Q +++ +DL K FE+ +SEI+++
Sbjct: 8 LQQLREAFNAGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFESEVSEIAIS 67
Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXX 192
++ LAL+ L+ W K EK +L T SA I EP G+VL+I WNYP L+L P
Sbjct: 68 QAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPLNLTLVPLVG 127
Query: 193 XXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
LKPSEI+ AT +LA++L Y+D S VV G ET LLE ++D I +T
Sbjct: 128 AIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFAVVLGGPQETGQLLEHRFDYIFFT 187
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
G+ VG+IVMAAAAKHLTP+ LELGGK+P VD + Q R+ ++ N GQ C+
Sbjct: 188 GNTYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQTVANRVAWFRYF-NAGQTCVA 246
Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
DY++ +++ +L+ +L+N + F+G NP S +L RI+N HF RL LL +
Sbjct: 247 PDYVLCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFERLQGLLG----CGR 302
Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
+ GGQ DE + IAPT+L+DV + +M+EEIFGP+LP+VTV+ + A
Sbjct: 303 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVTNLDEA 351
|
|
| UNIPROTKB|Q5XI42 Aldh3b1 "Aldehyde dehydrogenase family 3 member B1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 143/349 (40%), Positives = 212/349 (60%)
Query: 73 MKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMT 132
+++LR +N+ +T+S E+R +Q+Q +++ +DL K FE+ +SEI+++
Sbjct: 8 LQQLREAFNAGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFESEVSEIAIS 67
Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXX 192
++ LAL+ L+ W K EK +L T SA I EP G+VL+I WNYP L+L P
Sbjct: 68 QAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPLNLTLVPLVG 127
Query: 193 XXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
LKPSEI+ AT +LA++L Y+D S VV G ET LLE ++D I +T
Sbjct: 128 AIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFAVVLGGPQETGQLLEHRFDYIFFT 187
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
G+ VG+IVMAAAAKHLTP+ LELGGK+P VD + Q R+ ++ N GQ C+
Sbjct: 188 GNTYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQTVANRVAWFRYF-NAGQTCVA 246
Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
DY++ +++ +L+ +L+N + F+G NP S +L RI+N HF RL LL +
Sbjct: 247 PDYVLCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFERLQGLLG----CGR 302
Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
+ GGQ DE + IAPT+L+DV + +M+EEIFGP+LP+VTV+ + A
Sbjct: 303 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVTNLDEA 351
|
|
| MGI|MGI:1914939 Aldh3b1 "aldehyde dehydrogenase 3 family, member B1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 144/349 (41%), Positives = 209/349 (59%)
Query: 73 MKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMT 132
+++LR + +T+S E+R +Q+Q +++ +DL K FE +SEI+++
Sbjct: 8 LQQLREAFKEGRTRSAEFRAAQLQGLSHFLRDNKQQLQEALAQDLHKSAFEAEVSEIAIS 67
Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXX 192
++ LAL+ L+ W K EK +L T SA I EP G+VL+I WNYP L+L P
Sbjct: 68 QAEVDLALRNLRSWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIVPWNYPINLTLVPLVG 127
Query: 193 XXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
LKPSEI+ AT +LA++L Y+D S VV G ET LLE K+D I +T
Sbjct: 128 AIAAGNCVVLKPSEISKATEKILAEVLPRYLDQSCFTVVLGGRQETGQLLEHKFDYIFFT 187
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
G+ VG+IVMAAAAKHLTP+ LELGGK+P VD + Q+ R+ ++ N GQ C+
Sbjct: 188 GNAYVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQIVANRVAWFRYF-NAGQTCVA 246
Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
DYI+ +++ +L+ +L+N + F+G NP S +L RI+N HF RL LL +
Sbjct: 247 PDYILCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFKRLQGLLG----CGR 302
Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
+ GGQ DE + IAPT+L+DV + +M+EEIFGP+LP+VTV + A
Sbjct: 303 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVRSLDEA 351
|
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| UNIPROTKB|I6L6E1 SSC.15124 "Aldehyde dehydrogenase" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 144/346 (41%), Positives = 205/346 (59%)
Query: 70 ASLMKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEI 129
A ++ LR ++S +T+ E+R +Q++ + +DL K FE+ +SEI
Sbjct: 5 ADTLQRLRETFSSGRTRPAEFRATQLKGLGRFLQENKQLLQEALAQDLHKSTFESQVSEI 64
Query: 130 SMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDP 189
S+++S LAL+ L+ W K EK +L T SA I EP G+VL+I+ WNYP L+L P
Sbjct: 65 SISQSEINLALRNLRAWMKDEKVSKNLATQLDSAFIRKEPFGLVLIIAPWNYPVNLTLMP 124
Query: 190 XXXXXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKI 249
LKPSEI+ +T +LA++L Y+D S VV G ET LLE K+D I
Sbjct: 125 LVGALAAGNCVVLKPSEISKSTEKVLAEVLPRYLDQSCFAVVLGGPEETGQLLEHKFDHI 184
Query: 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309
+TGSPRVG+IVM AAAKHLTPV LELGGK+P VD + Q R+ ++ N GQ
Sbjct: 185 FFTGSPRVGKIVMTAAAKHLTPVTLELGGKNPCYVDDNCDPQTVANRVAWFRYF-NTGQT 243
Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
C+ DYI+ + + +L+ +L++ + F+G +P S DL RI+N HF RL LL
Sbjct: 244 CVAPDYILCSPETQARLLPALQSAITRFYGDDPRASPDLGRIINHKHFQRLRGLLS---- 299
Query: 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
++ GGQ D+ IAPT+L+DV + +M+EEIFGP+LPI+ V
Sbjct: 300 CGRVAIGGQSDDSDRYIAPTVLVDVQETEPVMQEEIFGPILPILNV 345
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| RGD|1584166 Aldh3b2 "aldehyde dehydrogenase 3 family, member B2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 144/346 (41%), Positives = 204/346 (58%)
Query: 76 LRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMTKSS 135
LR +N+ +T+ E+R +Q+Q + KD+ K FE+ +SEI + ++
Sbjct: 8 LREAFNAGRTRPAEFRTAQLQGLGRFLKDNKQLLQDALAKDVGKSAFESDMSEIILCQNE 67
Query: 136 CKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXXXXX 195
LALK L+ W K E T+ T SSA I EP G+VL+I+ WNYP L + P
Sbjct: 68 VDLALKNLQTWMKDESVSTNFLTKFSSAFIRKEPFGLVLIIAPWNYPLNLMIMPLVGAIA 127
Query: 196 XXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSP 255
LKPSE++ T +LA+LL Y+D S VV G ET LL+ K+D I +TGSP
Sbjct: 128 AGNCVVLKPSEMSKNTEKVLAELLPQYLDQSCFAVVLGGPEETGQLLKHKFDYIFFTGSP 187
Query: 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDY 315
RVG+IVMAAAAKHLTP+ LELGGK+P VD + Q R+ ++ N GQ C+ DY
Sbjct: 188 RVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQTVANRVAWFRYF-NAGQTCVAPDY 246
Query: 316 IITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVY 375
++ +++ +L+ +L+N + F+G NP S +L RI+N HF RL LL ++
Sbjct: 247 VLCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFERLQGLLG----CGRVAI 302
Query: 376 GGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
GGQ DE + IAPT+L+DV + +M+EEIFGP+LP+VTV + A
Sbjct: 303 GGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVRSLDEA 348
|
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| UNIPROTKB|F1LT79 LOC100365083 "Aldehyde dehydrogenase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 144/349 (41%), Positives = 205/349 (58%)
Query: 73 MKELRNNYNSRKTKSYEWRMSQIQSIANMXXXXXXXXXXXXHKDLSKPPFETFISEISMT 132
++ L+ +N+ KTK ++R Q++S+ DL K FE+ +SEI +
Sbjct: 5 LQRLKEAFNTGKTKMAKFRAEQLESLGQFLQDNSKQLHDALDGDLGKSAFESDMSEIILC 64
Query: 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPXXX 192
++ LALK L+ W K E T+ T SSA I EP G+VL+I+ WNYP L + P
Sbjct: 65 QNEVDLALKNLQTWMKDESVSTNFLTKFSSAFIRKEPFGLVLIIAPWNYPLNLMIMPLVG 124
Query: 193 XXXXXXXXXLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYT 252
LKPSE++ T +LA+LL Y+D S VV G ET LL+ K+D I +T
Sbjct: 125 AIAAGNCVVLKPSEMSKNTEKVLAELLPQYLDQSCFAVVLGGPEETGQLLKHKFDYIFFT 184
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
GSPRVG+IVMAAAAKHLTP+ LELGGK+P VD + Q R+ ++ N GQ C+
Sbjct: 185 GSPRVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQTVANRVAWFRYF-NAGQTCVA 243
Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
DY++ +++ +L+ +L+N + F+G NP S +L RI+N HF RL LL +
Sbjct: 244 PDYVLCSQEMQERLVPALQNAITRFYGDNPQTSPNLGRIINQKHFERLQGLLG----CGR 299
Query: 373 IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
+ GGQ DE + IAPT+L+DV + +M+EEIFGP+LP+VTV + A
Sbjct: 300 VAIGGQSDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVRNLDEA 348
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8W033 | AL3I1_ARATH | 1, ., 2, ., 1, ., 3 | 0.6866 | 0.8531 | 0.6654 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.2.1 | 0.921 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00019283001 | SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (549 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | GSVIVG00038001001 | SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence; (622 aa) | • | • | 0.919 | ||||||
 | GSVIVG00035907001 | SubName- Full=Chromosome chr10 scaffold_81, whole genome shotgun sequence; (215 aa) | • | 0.899 | |||||||
 | ADH2 | SubName- Full=Putative uncharacterized protein (Chromosome chr4 scaffold_73, whole genome shotg [...] (380 aa) | • | 0.899 | |||||||
 | GSVIVG00034833001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (380 aa) | • | 0.899 | |||||||
 | GSVIVG00034832001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (380 aa) | • | 0.899 | |||||||
 | GSVIVG00034830001 | SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (380 aa) | • | 0.899 | |||||||
 | GSVIVG00031273001 | SubName- Full=Chromosome undetermined scaffold_55, whole genome shotgun sequence; (411 aa) | • | 0.899 | |||||||
 | GSVIVG00030679001 | SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (476 aa) | • | 0.899 | |||||||
 | GSVIVG00030677001 | SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (495 aa) | • | 0.899 | |||||||
 | GSVIVG00029757001 | SubName- Full=Chromosome chr10 scaffold_50, whole genome shotgun sequence; (293 aa) | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 429 | |||
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 0.0 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 0.0 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 1e-170 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 1e-169 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 1e-160 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 1e-160 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 1e-154 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 1e-153 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 1e-129 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 1e-120 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 3e-91 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 7e-74 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 4e-71 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 4e-70 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 3e-68 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 1e-53 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-51 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 4e-47 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 6e-47 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-46 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-45 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 8e-45 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 9e-45 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 4e-43 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 5e-43 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-42 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 2e-42 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 2e-42 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 7e-42 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 7e-42 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 2e-41 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 5e-41 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 5e-41 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 2e-40 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 2e-39 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 8e-39 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 9e-39 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-38 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 3e-38 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 7e-38 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-37 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-37 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 1e-37 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 6e-37 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 6e-37 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-36 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-36 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 5e-36 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 9e-36 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-35 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 2e-35 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 2e-35 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 3e-35 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 3e-35 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 4e-34 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 5e-34 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-33 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 2e-33 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 4e-33 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 8e-33 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 2e-32 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 2e-32 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 2e-32 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 6e-32 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 7e-32 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 9e-32 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-31 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 3e-31 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 3e-31 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 2e-30 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 5e-30 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 2e-29 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 2e-29 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 9e-29 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 2e-28 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 3e-28 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 1e-27 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-27 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 1e-26 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 5e-26 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 5e-26 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 5e-25 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 6e-25 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 3e-24 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 2e-23 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 4e-23 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 1e-21 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 3e-21 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 4e-20 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 5e-20 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 6e-18 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 3e-17 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 5e-17 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 8e-17 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 6e-16 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 2e-15 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 3e-15 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 5e-15 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 5e-14 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 5e-14 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 1e-13 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 2e-12 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 3e-12 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 1e-11 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 1e-09 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 7e-09 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 3e-08 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 1e-07 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 2e-07 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 7e-06 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 3e-05 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 3e-05 | |
| TIGR01092 | 715 | TIGR01092, P5CS, delta l-pyrroline-5-carboxylate s | 6e-05 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 8e-05 | |
| TIGR02518 | 488 | TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase ( | 8e-05 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 8e-04 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 594 bits (1532), Expect = 0.0
Identities = 229/347 (65%), Positives = 283/347 (81%)
Query: 69 AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE 128
A L++ELR + S +T+S EWR SQ++ + +++E E++I A+ +DL KP E+F E
Sbjct: 1 APRLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDE 60
Query: 129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLD 188
+S+ SSCKLA+KELK W PEK KT LTT+P+ AEI+SEPLGVVLVIS WN+PFLLSL+
Sbjct: 61 VSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLE 120
Query: 189 PVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDK 248
PVIGAIAAGNAVVLKPSE+APATS+LLAKL+ +Y+D A++V+EG V ET+ALLEQKWDK
Sbjct: 121 PVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAIKVIEGGVPETTALLEQKWDK 180
Query: 249 ILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQ 308
I +TGSPRVGRI+MAAAAKHLTPV LELGGK P +VDST++L+V RRI GKW NNGQ
Sbjct: 181 IFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQ 240
Query: 309 ACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK 368
ACI DY++ + FAP LID+L+N L++FFG+NP ESKDLSRIVN HF RL+ LLD+
Sbjct: 241 ACIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPS 300
Query: 369 VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
V+DKIV+GG+RDEK L I PTILLD P DS+IM EEIFGPLLPI+TV
Sbjct: 301 VADKIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITV 347
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 521 bits (1345), Expect = 0.0
Identities = 185/347 (53%), Positives = 239/347 (68%), Gaps = 5/347 (1%)
Query: 70 ASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEI 129
A L+ LR + + KT+S EWR +Q++++ M+ E EEEI A++ DL KPP E +++EI
Sbjct: 1 AELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEI 60
Query: 130 SMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDP 189
++ ALK LK W KP + L P+ A +I EPLGVVL+I WNYP L+L P
Sbjct: 61 AVVLGEIDHALKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAP 120
Query: 190 VIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKI 249
+IGAIAAGN VVLKPSE+APATS+LLAKL+ Y D AV VVEG V +ALL + +D I
Sbjct: 121 LIGAIAAGNTVVLKPSELAPATSALLAKLIPKYFDPEAVAVVEGGVEVATALLAEPFDHI 180
Query: 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309
+TGSP VG+IVM AAAKHLTPV LELGGKSP +VD NL+V RRI GK++ N GQ
Sbjct: 181 FFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFL-NAGQT 239
Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
CI DY++ + +LI+ L+ +KEF+G++P ES D RI+N HF RLASLLD
Sbjct: 240 CIAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLD---- 295
Query: 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
K+V GGQ D+++ IAPTIL DV DS +M+EEIFGP+LPI+T
Sbjct: 296 DGKVVIGGQVDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYD 342
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 486 bits (1251), Expect = e-170
Identities = 239/353 (67%), Positives = 297/353 (84%)
Query: 64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFE 123
F A+ L+ ELR +++ T+ YEWR++Q++ + + + E EI+ A+ DL KP E
Sbjct: 7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELE 66
Query: 124 TFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPF 183
+ + E+S+ ++S KLALK+LK W PEKAKTSLTT+P+SAEI+SEPLGVVLVIS WNYPF
Sbjct: 67 SSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPF 126
Query: 184 LLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLE 243
LLS+DPVIGAI+AGNAVVLKPSE+APA+S+LLAKLLE Y+D+SAVRVVEGAV ET+ALLE
Sbjct: 127 LLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQYLDSSAVRVVEGAVTETTALLE 186
Query: 244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
QKWDKI YTGS ++GR++MAAAAKHLTPV+LELGGKSP VVDS +L+VT RRIIAGKW
Sbjct: 187 QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWG 246
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
NNGQACI DYI+TTK++APK+ID+++ EL+ F+GKNPMESKD+SRIVN HF RL+ L
Sbjct: 247 CNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKL 306
Query: 364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
LDE +VSDKIVYGG++D + LKIAPTILLDVP DS IM EEIFGPLLPI+T++
Sbjct: 307 LDEKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLN 359
|
Length = 484 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 480 bits (1239), Expect = e-169
Identities = 171/345 (49%), Positives = 234/345 (67%), Gaps = 5/345 (1%)
Query: 70 ASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEI 129
SL+++ R + + TK E+R+ Q++ + I++ E EI+EA+ KDL K FE +++EI
Sbjct: 1 ESLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEI 60
Query: 130 SMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDP 189
S A+K LK W KP++ KT L +PS + I EP GVVL+I+ WNYPF L+L P
Sbjct: 61 GFVLSEINYAIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAP 120
Query: 190 VIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKI 249
+IGAIAAGN VLKPSE+ P TS ++AK++E+ D V VVEG V E LL+QK+D I
Sbjct: 121 LIGAIAAGNTAVLKPSELTPNTSKVIAKIIEETFDEEYVAVVEGGVEENQELLDQKFDYI 180
Query: 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309
+TGS RVG+IVM AAAKHLTPV LELGGKSP +VD NL++ +RI+ GK++ N GQ
Sbjct: 181 FFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFL-NAGQT 239
Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
C+ DY++ + K I L+ E+K+F+G++P+ES D RI+N HF RLA LLD
Sbjct: 240 CVAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDN--- 296
Query: 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
KIV+GG D + L I PTIL +V D +M+EEIFGP+LP++T
Sbjct: 297 -GKIVFGGNTDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLT 340
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 461 bits (1187), Expect = e-160
Identities = 188/347 (54%), Positives = 253/347 (72%), Gaps = 3/347 (0%)
Query: 72 LMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISM 131
+ ELR Y S +T+S EWR SQ++ + ++++ EE I +A+H+DL K E + E+ +
Sbjct: 11 SVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGV 70
Query: 132 TKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVI 191
S LAL LK W P+KAK L +P++AE++ EPLGVVL+ S+WN+P LSL+P+I
Sbjct: 71 LTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLI 130
Query: 192 GAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILY 251
GAIAAGNAVVLKPSE+APATS+ LA + Y+D+ AV+V+EG A LL+ KWDKI +
Sbjct: 131 GAIAAGNAVVLKPSELAPATSAFLAANIPKYLDSKAVKVIEGGPAVGEQLLQHKWDKIFF 190
Query: 252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD---STINLQVTTRRIIAGKWMANNGQ 308
TGSPRVGRI+M AAAKHLTPV LELGGK P +VD S+ + +V RI+ GKW + GQ
Sbjct: 191 TGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQ 250
Query: 309 ACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK 368
ACI +DY++ + FAP LI+ L++ +K+FFG+NP ESK ++RI+N HF RL++LL + +
Sbjct: 251 ACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPR 310
Query: 369 VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
V+ IV+GG DEK+L I PTILL+ P DS IM EEIFGPLLPI+TV
Sbjct: 311 VAASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITV 357
|
Length = 484 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 459 bits (1183), Expect = e-160
Identities = 175/347 (50%), Positives = 234/347 (67%), Gaps = 5/347 (1%)
Query: 70 ASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEI 129
A ++ R ++S KT+ E+R+ Q++++ M+EE E+EI+EA+ KDL KP FE +SEI
Sbjct: 1 AEAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEI 60
Query: 130 SMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDP 189
+ K+ K A+ L W KPE K +L T I EPLGVVL+I WNYP L+L P
Sbjct: 61 LLVKNEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVP 120
Query: 190 VIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKI 249
++GAIAAGN VV+KPSE++PAT+ LLA+L+ Y+D VV G V ET+ LL+Q++D I
Sbjct: 121 LVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPVVLGGVEETTELLKQRFDYI 180
Query: 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309
YTGS VG+IVM AAAKHLTPV LELGGKSP VD + ++ V RRI GK++ N GQ
Sbjct: 181 FYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFI-NAGQT 239
Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
CI DY++ T + K +++L+ LKEF+G++P ES D RI+N HF RL LL
Sbjct: 240 CIAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLS---- 295
Query: 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
K+ GGQ DEK+ IAPT+L DV +M+EEIFGP+LPIVTV+
Sbjct: 296 GGKVAIGGQTDEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVN 342
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 442 bits (1140), Expect = e-154
Identities = 172/352 (48%), Positives = 229/352 (65%), Gaps = 4/352 (1%)
Query: 71 SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEIS 130
S+ LR + S KTK E+R+ Q++ + +++ EE I+EA+ KDL +PPFET ++E+S
Sbjct: 9 SIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVS 68
Query: 131 MTKSSCKLALKELKYWTKPEKAK-TSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDP 189
K+ LK LK W K EK K L I EPLGVVL+I WNYP LL+L P
Sbjct: 69 GVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSP 128
Query: 190 VIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKI 249
++GAIAAG VVLKPSE+ P T++LLA+L+ Y+D A +VV+G V ET+ALLEQK+DKI
Sbjct: 129 LVGAIAAGCTVVLKPSELTPHTAALLAELVPKYLDPDAFQVVQGGVPETTALLEQKFDKI 188
Query: 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309
YTGS RVGRI+ AAAKHLTPV LELGGKSP +V +L++ +RI+ GK+ N GQ
Sbjct: 189 FYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFG-NAGQI 247
Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
C+ DY++ + ++ L+ L EF+ S D +RIVNP HF RL SLLD K
Sbjct: 248 CVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTK- 306
Query: 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
K+V GG+ DE I PTI+ DV D ++M EE+FGP+LPI+ V + A
Sbjct: 307 -GKVVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEA 357
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 443 bits (1142), Expect = e-153
Identities = 171/351 (48%), Positives = 244/351 (69%), Gaps = 3/351 (0%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
+ E ++K+L+ ++ + KT+ E+R Q++++ M+EE ++E EA+HKDL + PFET
Sbjct: 5 NPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFET 64
Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
++E+ +T + + LK L + KPEK T P + II EPLGVVLVI WNYP
Sbjct: 65 KMTEVLLTVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLN 124
Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQ 244
L+L P+ GAIAAGN VVLKPSE++P TS L+AKLL Y+D S VRV+EG V T+ LL++
Sbjct: 125 LTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKYLDPSYVRVIEGGVEVTTELLKE 184
Query: 245 KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMA 304
+D I +TGSPRVG++VM AAA++LTP LELGGKSP +VD + NL+V RRI GK++
Sbjct: 185 PFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFL- 243
Query: 305 NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLL 364
N GQ C+ DY++ + K I++L+ +KEFFG++P +S+D SRIVN FH RLA L+
Sbjct: 244 NAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELI 303
Query: 365 DEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
+ K+VYGG+ D + +APTI+++ DS +M+EEIFGP+LPI+T
Sbjct: 304 KDHG--GKVVYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTY 352
|
Length = 493 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 379 bits (975), Expect = e-129
Identities = 150/343 (43%), Positives = 214/343 (62%), Gaps = 6/343 (1%)
Query: 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSS 135
+ + + + + R+++++ + I + EEII A+ D KP E ++EI S
Sbjct: 7 QQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSE 66
Query: 136 CKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIA 195
A+K LK W KP++ +T L + + ++I EP GV L+IS WNYPF L+ P++ AIA
Sbjct: 67 INHAIKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIA 126
Query: 196 AGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSP 255
AGN +LKPSE+ P TS+++AK++ + D V V EG ALLE +D I +TGSP
Sbjct: 127 AGNTAILKPSELTPHTSAVIAKIIREAFDEDEVAVFEGDAEVAQALLELPFDHIFFTGSP 186
Query: 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDY 315
VG+IVMAAAAKHL V LELGGKSP +VD T +L+ ++I GK++ N GQ CI DY
Sbjct: 187 AVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFL-NAGQTCIAPDY 245
Query: 316 IITTKDFAPKLIDSLRNELKEFFGKNPM--ESKDLSRIVNPFHFARLASLLDEDKVSD-- 371
+ + ++ L+ E+++F+GK+ S DL+RIVN HF RL LLD D V+
Sbjct: 246 VFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLD-DAVAKGA 304
Query: 372 KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
K+ +GGQ D Q IAPT+L +V D IM+EEIFGP+LPI+T
Sbjct: 305 KVEFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIIT 347
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 356 bits (916), Expect = e-120
Identities = 134/361 (37%), Positives = 202/361 (55%), Gaps = 20/361 (5%)
Query: 61 MQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLS-K 119
+ +KAA L N S E R ++ + ++ + ++ + EAI D +
Sbjct: 1 QALLERQKAAFL----ANPPPS-----LEERRDRLDRLKALLLDNQDALAEAISADFGHR 51
Query: 120 PPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179
ET ++EI + + K A K LK W KP + L P+ AE+ +PLGVV +I W
Sbjct: 52 SRHETLLAEILPSIAGIKHARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPW 111
Query: 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETS 239
NYP L+L P+I A+AAGN V++KPSE P TS+LLA+LL +Y D V VV G +
Sbjct: 112 NYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDEDEVAVVTGGADVAA 171
Query: 240 ALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIA 299
A +D +L+TGS VGR VM AAA++LTPV LELGGKSPA++ +L RI
Sbjct: 172 AFSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAF 231
Query: 300 GKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFAR 359
GK + N GQ C+ DY++ +D + + + + + + + ++ D + I+N H+AR
Sbjct: 232 GK-LLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYP-TLADNPDYTSIINERHYAR 289
Query: 360 LASLLDEDKVSDK------IVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413
L LL++ + K + G+ K+ PT++L+V DD +M+EEIFGP+LPI+
Sbjct: 290 LQGLLEDAR--AKGARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPIL 347
Query: 414 T 414
T
Sbjct: 348 T 348
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 282 bits (723), Expect = 3e-91
Identities = 105/344 (30%), Positives = 172/344 (50%), Gaps = 12/344 (3%)
Query: 80 YNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLA 139
+ + R + ++ +A+++EE+ EE+ + KP E + E++ + +
Sbjct: 11 FKAWAALPPAERAAILRKLADLLEERREELAALETLETGKP-IEEALGEVARAADTFRYY 69
Query: 140 LKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 199
+ A + EPLGVV I+ WN+P LL+ + A+AAGN
Sbjct: 70 AGLARRLHGEVIP---SPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNT 126
Query: 200 VVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETS-ALLEQKW-DKILYTGSPR 256
VVLKPSE+ P T+ LLA+LL + + + VV G E AL DKI +TGS
Sbjct: 127 VVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTA 186
Query: 257 VGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYI 316
VG+ +M AAA++L V LELGGKSP +V +L + + G + N GQ C +
Sbjct: 187 VGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFG-NAGQVCTAASRL 245
Query: 317 ITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDK-VSDKIV 374
+ + + ++ L +K NP++ D+ +++ R+ + +++ K K++
Sbjct: 246 LVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLL 305
Query: 375 YGGQRDE--KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
GG+R E K + PT+L DV D I +EEIFGP+LP++
Sbjct: 306 CGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFK 349
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 238 bits (609), Expect = 7e-74
Identities = 119/373 (31%), Positives = 179/373 (47%), Gaps = 19/373 (5%)
Query: 52 ATMA--AEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEI 109
AT A DV+ A + R + + S E R + ++ IA+++E + EE+
Sbjct: 22 ATGEVIATVPAATAEDVDAA---VAAARAAFEAWSRLSAEERAAILRRIADLLEARAEEL 78
Query: 110 IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEP 169
I + KP E EI+ + +E + T T S A + EP
Sbjct: 79 AALITLETGKPISEARG-EIARAADFIRYYAEEARRLEGE----TIPTDKGSKALVRREP 133
Query: 170 LGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAV 228
LGVV I+ WN+P L+ + A+AAGN VVLKPSE P ++ LA+L + + +
Sbjct: 134 LGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVL 193
Query: 229 RVVEGAVAETS-ALLEQKW-DKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286
VV G AE AL+ D I +TGS VGR + AAAA +L PV LELGGKSPA+V
Sbjct: 194 NVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLKPVTLELGGKSPAIVLE 253
Query: 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ES 345
+L + G + N GQ C +I + + ++ L +P+ S
Sbjct: 254 DADLDAAVDAAVFGAFF-NAGQRCTAASRLIVHESVYDEFVERLVARAASLKVGDPLDPS 312
Query: 346 KDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKE 403
DL +++ R+ + ED V++ +++ GG+R + PTIL V D I +E
Sbjct: 313 TDLGPLISEEQLDRVEGYI-EDAVAEGARLLAGGKRPGGYF-VEPTILEGVTPDMRIARE 370
Query: 404 EIFGPLLPIVTVS 416
EIFGP+LP++
Sbjct: 371 EIFGPVLPVIRFK 383
|
Length = 472 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 230 bits (590), Expect = 4e-71
Identities = 115/351 (32%), Positives = 169/351 (48%), Gaps = 30/351 (8%)
Query: 87 SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYW 146
E R ++ + + +E+ E +H + KP + + E+ LAL+ + +
Sbjct: 38 GVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGL-EVL-------LALEAIDWA 89
Query: 147 TK-------PEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 199
+ P K T L A + P GVV VIS WNYP L + +I A+AAGNA
Sbjct: 90 ARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNA 149
Query: 200 VVLKPSEIAPATSSLLAKLLEDYVDNSAV-RVVEGAVAETSALLEQKWDKILYTGSPRVG 258
VVLKPSE+ P LLA+ V +VV G A +AL++ DK+ +TGS G
Sbjct: 150 VVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATG 209
Query: 259 RIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIIT 318
R VMAAAA+ L PV+LELGGK P +V + +L+ + G M N GQ CI V+ +
Sbjct: 210 RKVMAAAAERLIPVVLELGGKDPMIVLADADLERAAAAAVWGA-MVNAGQTCISVERVYV 268
Query: 319 TKDFAPKLIDSLRNELKEF-FGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD------ 371
+ + + L + + G + + D + P AR ++ V D
Sbjct: 269 HESVYDEFVARLVAKARALRPGADDIGDAD----IGPMTTARQLDIV-RRHVDDAVAKGA 323
Query: 372 KIVYGGQRDEKQ-LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
K + GG R PT+L DVP D +M+EE FGP+LP++ V+ A
Sbjct: 324 KALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEA 374
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 228 bits (583), Expect = 4e-70
Identities = 102/329 (31%), Positives = 164/329 (49%), Gaps = 20/329 (6%)
Query: 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLT 157
A+++EE+ +E+ E + KP E E+ + + + K
Sbjct: 60 AADLLEERRDELAELETLETGKPLAEARG-EVPRAIDTLRYYAGLAR--------KLEGE 110
Query: 158 TYPSS----AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS 213
T PS A EPLGVV I+ WN+P LL+ + A+AAGN VVLKPSE+ P T+
Sbjct: 111 TLPSDPGVLAYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTAL 170
Query: 214 LLAKLLEDY-VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLT 270
LLA+L E+ + + VV G+ +E L + DK+ +TGS VGR + AAAK+L
Sbjct: 171 LLAELFEEAGLPPGVLNVVTGSGSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLK 230
Query: 271 PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330
V LELGGK+P +V +L + G + N GQ C ++ + + ++ L
Sbjct: 231 RVTLELGGKNPLIVFDDADLDAAVEGAVFGAF-GNAGQVCTAGSRLLVHESIYDEFVERL 289
Query: 331 RNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQ-LKIA 387
K +P++ D+ +++ R+ S +++ K K++ GG+ ++ +
Sbjct: 290 VEAAKSLKVGDPLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVE 349
Query: 388 PTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
PT+L DV D I +EEIFGP+L ++
Sbjct: 350 PTVLADVTPDMRIAQEEIFGPVLSVIPFK 378
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 220 bits (564), Expect = 3e-68
Identities = 106/342 (30%), Positives = 156/342 (45%), Gaps = 65/342 (19%)
Query: 77 RNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSC 136
R + + R + ++ IA+++EE+ EE+ + KP E + E++ +
Sbjct: 4 RAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKP-IEEALGEVARAIDTF 62
Query: 137 KLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAA 196
+ A K + A + EPLGVV VI+ WN+P LL+ + A+AA
Sbjct: 63 RYAAGLAD---KLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAA 119
Query: 197 GNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETS-ALLEQKW-DKILYTG 253
GN VVLKPSE+ P T+ LA+LL++ + V VV G E ALL DKI +TG
Sbjct: 120 GNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTG 179
Query: 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGV 313
S VG+ +M AAA++L PV LELGGKSP +VD +L + G + N GQ C
Sbjct: 180 STAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFF-NAGQICTAA 238
Query: 314 DYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKI 373
SR+ L+ E + D+
Sbjct: 239 -----------------------------------SRL-----------LVHES-IYDEF 251
Query: 374 VYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
V ++L T+L+DV D I +EEIFGP+LP++
Sbjct: 252 V-------EKLV---TVLVDVDPDMPIAQEEIFGPVLPVIRF 283
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 184 bits (470), Expect = 1e-53
Identities = 119/370 (32%), Positives = 182/370 (49%), Gaps = 31/370 (8%)
Query: 84 KTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL 143
S+ R ++S+ I E +EEI +D K + + EI +T + LK
Sbjct: 35 AKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLKHG 94
Query: 144 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLK 203
+ +PE L + A + EPLGVV I +WNYPF L P+I A+ AGNA+V+K
Sbjct: 95 EKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVK 154
Query: 204 PSEIAPATS----SLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQ-KWDKILYTGSPRV 257
SE +S S++ + L D V++V AL D I + GSP V
Sbjct: 155 VSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPV 214
Query: 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM----ANNGQACIGV 313
G+ VMAAAA+ LTPV+LELGGK PA+V +L IA M ++GQ CIG+
Sbjct: 215 GKKVMAAAAESLTPVVLELGGKDPAIVLDDADLDQ-----IASIIMRGTFQSSGQNCIGI 269
Query: 314 DYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD- 371
+ +I + KL++ L + ++ P++ D+ +++P F RL L+ D V
Sbjct: 270 ERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELV-ADAVEKG 328
Query: 372 -KIVYGGQRDEKQLK-----IAPTILLDVPDDSTIMKEEIFGPLLPIV-------TVSIV 418
+++ GG+R PT+L+DV D I +EE+FGP++ ++ V I
Sbjct: 329 ARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIA 388
Query: 419 SSAHFKLKAC 428
+S + L A
Sbjct: 389 NSTEYGLGAS 398
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 178 bits (455), Expect = 1e-51
Identities = 95/271 (35%), Positives = 143/271 (52%), Gaps = 16/271 (5%)
Query: 161 SSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE 220
+ A ++ EP+GVVL I+ WN P +L + +AAGN VVLK SE++P T L+ ++
Sbjct: 90 TLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFH 149
Query: 221 DY-VDNSAVRVV----EGAVAETSALLEQKW-DKILYTGSPRVGRIVMAAAAKHLTPVIL 274
+ + + VV E A AL+ K+ +TGS RVGRI+ AAKHL PV+L
Sbjct: 150 EAGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLL 209
Query: 275 ELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334
ELGGK+PA+V +L + G ++ N+GQ C+ + II + A + ++ L+
Sbjct: 210 ELGGKAPAIVLEDADLDAAANAALFGAFL-NSGQICMSTERIIVHESIADEFVEKLKAAA 268
Query: 335 KEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQ--LKIAPTI 390
++ F L +V+ R+ L+D D +S K+V GG DE + PTI
Sbjct: 269 EKLFAG----PVVLGSLVSAAAADRVKELVD-DALSKGAKLVVGGLADESPSGTSMPPTI 323
Query: 391 LLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
L +V D I EE FGP++ I+ V A
Sbjct: 324 LDNVTPDMDIYSEESFGPVVSIIRVKDEEEA 354
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 4e-47
Identities = 120/383 (31%), Positives = 181/383 (47%), Gaps = 34/383 (8%)
Query: 55 AAEEKQMQRFDVEKAASLMKELRNNYNSRKTK-SYEWRMSQIQSIANMIEEKEEEI--IE 111
AA E+ DV+KA +K R + S +K + E R + +A+++E+ + + IE
Sbjct: 41 AAGEE-----DVDKA---VKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIE 92
Query: 112 AIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIISE 168
A+ D KP + ++ + ++Y W + KT T+ A + E
Sbjct: 93 AL--DSGKPYHSNALGDLDEI-------IAVIRYYAGWADKIQGKTIPTSPNKLAYTLHE 143
Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSA 227
P GV I WNYP ++ + A+AAGN VV+KP+E P + A L+++
Sbjct: 144 PYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGV 203
Query: 228 VRVVEGAVAET-SALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
V ++ G A SAL E DKI +TGS GR+VM AAA++L V LE GGKSPA+V
Sbjct: 204 VNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAAAQNLKAVTLECGGKSPALVF 263
Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMES 345
+L + AG M N+GQ C I + K ++ +K+ +
Sbjct: 264 EDADLDQAVKWAAAG-IMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFD 322
Query: 346 KDLSR--IVNPFHFARLASLLDEDKVS-DKIVYGG----QRDEKQLKIAPTILLDVPDDS 398
D V+ + R+ S +++ K K+VYGG + K I PTI DVP D
Sbjct: 323 DDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDM 382
Query: 399 TIMKEEIFGPLLPIVTVSIVSSA 421
I+KEEIFGP++ I A
Sbjct: 383 RIVKEEIFGPVVVISKFKTYEEA 405
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 167 bits (424), Expect = 6e-47
Identities = 95/338 (28%), Positives = 150/338 (44%), Gaps = 27/338 (7%)
Query: 91 RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
R + +A+ IEE EE+ ++ KP E+ A+ +++
Sbjct: 43 RSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDELP-------GAVDNFRFFAGAA 95
Query: 151 KAKTSLTTYPSSAE--------IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 202
+ P++ E I EP+GVV I+ WNYP +++ + A+AAGN VVL
Sbjct: 96 RTLEG----PAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVL 151
Query: 203 KPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRI 260
KPSE P T+ LLA+L + + V VV G A L + + TGS R G+
Sbjct: 152 KPSETTPLTTLLLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKK 211
Query: 261 VMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320
V AAA L V LELGGK+P +V +L I + N GQ C + +
Sbjct: 212 VARAAADTLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGY-YNAGQDCTAACRVYVHE 270
Query: 321 DFAPKLIDSLRNELKEF-FGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQR 379
+ + +L + G E ++ + + R+A ++ +++ GG+R
Sbjct: 271 SVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAPAHARVLTGGRR 330
Query: 380 -DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
+ PT++ V D I++EEIFG P+VTV
Sbjct: 331 AEGPGYFYEPTVVAGVAQDDEIVQEEIFG---PVVTVQ 365
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 165 bits (421), Expect = 1e-46
Identities = 104/342 (30%), Positives = 165/342 (48%), Gaps = 49/342 (14%)
Query: 99 ANMIEEKEEEIIEAIHKDL-SKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLT 157
A ++EE+ +EI + + ++ S P F E+ + + A +PE
Sbjct: 32 AEILEERRDEIADWLIRESGSTRPKAAF--EVGAAIAILREAAGLP---RRPEG-----E 81
Query: 158 TYPSSAE-----IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
PS + PLGVV VIS +N+P +L++ V A+A GNAVVLKP P T
Sbjct: 82 ILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTG 141
Query: 213 SLL-AKLLEDYVDNSA------VRVVEGAVAET-SALLE-QKWDKILYTGSPRVGRIVMA 263
LL A++ E+ A + VV G +E AL+E + I +TGS VGR +
Sbjct: 142 GLLIAEIFEE-----AGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGE 196
Query: 264 AAAKHLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
A +HL V LELGG +P +V D+ ++L V G ++ + GQ C+ I+ +
Sbjct: 197 LAGRHLKKVALELGGNNPLIVLDDADLDLAV--SAAAFGAFL-HQGQICMAAGRILVHES 253
Query: 322 ----FAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIV 374
F KL+ + L G +P + + ++N R+ +++ ED V+ +++
Sbjct: 254 VYDEFVEKLVAKAKA-LP--VG-DPRDPDTVIGPLINERQVDRVHAIV-EDAVAAGARLL 308
Query: 375 YGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
GG + L PT+L DV D I +EEIFGP+ P++
Sbjct: 309 TGGTYE--GLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFD 348
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 1e-45
Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 14/268 (5%)
Query: 157 TTYPSSAEIIS----EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
T P ++++ EPLGVV I WN P +L+ + A+ AGN VVLK +E AP
Sbjct: 101 ETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAV 160
Query: 213 SLLAKLLEDYVDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLT 270
LLA++L + + V+ G E A L DK+ +TGS VG+I+ AAA L
Sbjct: 161 LLLAEILAQVLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLI 220
Query: 271 PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330
PV LELGGKSP +V +L IAG GQ+C + +D ++ L
Sbjct: 221 PVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKL 280
Query: 331 RNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQ-----RDEK 382
+L + +P+ E+ D+ I++ FA++ +D + ++ GG
Sbjct: 281 VAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLAD 340
Query: 383 QLKIAPTILLDVPDDSTIMKEEIFGPLL 410
+ PTI V ++ + +EEIFGP+L
Sbjct: 341 GFFVQPTIFSGVDNEWRLAREEIFGPVL 368
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 8e-45
Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 35/282 (12%)
Query: 157 TTYPSSAEIIS----EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
+YP ++ +P+GV +I+ WN P +L + A+A GN VVLKPSE P T+
Sbjct: 101 ESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTA 160
Query: 213 SLLAKLLEDY-----VDNSAVRVVEGAVAET-SALLEQK-WDKILYTGSPRVGRIVMAAA 265
LLA+L + V N VV G E +AL+ D I +TG GR +M AA
Sbjct: 161 WLLAELANEAGLPPGVVN----VVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAA 216
Query: 266 AKHLTPVILELGGKSPAVV----DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
A +L PV LELGGK+P +V D + R +NNG+ C+ I+ +
Sbjct: 217 APNLKPVSLELGGKNPNIVFADADLDRAVDAAVRSS-----FSNNGEVCLAGSRILVQRS 271
Query: 322 FAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLD---EDKVSDKIVYGG 377
+ ++ K +P+ ++ +++ H ++ ++ + I+ GG
Sbjct: 272 IYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAE--GATILTGG 329
Query: 378 QRDE-KQLK----IAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
R E L+ + PT++ + +DS + +EEIFGP++ ++
Sbjct: 330 GRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIP 371
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 9e-45
Identities = 88/262 (33%), Positives = 136/262 (51%), Gaps = 15/262 (5%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
+I +P+GVV I+ WN+P + + A+AAG VVLKP+E P ++ LA+L E+ +
Sbjct: 113 VIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGL 172
Query: 224 DNSAVRVVEGAVAETS-ALLEQKWD----KILYTGSPRVGRIVMAAAAKHLTPVILELGG 278
+ VV G+ AE AL KI +TGS VG+++MA AA + V LELGG
Sbjct: 173 PAGVLNVVTGSPAEIGEALCA---SPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGG 229
Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
+P +V +L IA K N GQ C+ + I + + ++ L +K+
Sbjct: 230 NAPFIVFDDADLDKAVDGAIASK-FRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLK 288
Query: 339 GKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQ-LKIAPTILLDV 394
N ++ D+ ++N ++ +L+ ED V+ K++ GG+R PT+L DV
Sbjct: 289 VGNGLDEGTDMGPLINERAVEKVEALV-EDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDV 347
Query: 395 PDDSTIMKEEIFGPLLPIVTVS 416
DD IM EE FGP+ PI+
Sbjct: 348 TDDMLIMNEETFGPVAPIIPFD 369
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 4e-43
Identities = 108/338 (31%), Positives = 175/338 (51%), Gaps = 21/338 (6%)
Query: 91 RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
R + +A +IE ++EE+ + + ++ KP ++ + E+ T KLA +E K
Sbjct: 45 RYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV-EVERTIRLFKLAAEEAK---VLR 100
Query: 151 KAKTSLTTYPSS----AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE 206
+ Y + A + EP+GVV I+ +N+P L + AIA GN+VV+KPS
Sbjct: 101 GETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSS 160
Query: 207 IAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMA 263
P T+ LAK+LE+ + + VV G +E + K + I +TGS VG ++ +
Sbjct: 161 NTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIAS 220
Query: 264 AAAKHLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
A V LELGG P +V D+ + V+ + G++ N GQ C V I+ ++
Sbjct: 221 KAGGTGKKVALELGGSDPMIVLKDADLERAVSI--AVRGRFE-NAGQVCNAVKRILVEEE 277
Query: 322 FAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQ 378
K + L ++K+ +P+ ES DL +++P R+ +L++ D V KI+YGG+
Sbjct: 278 VYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVN-DAVEKGGKILYGGK 336
Query: 379 RDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
RDE PT+L + D +MKEE+FGP+LPI V
Sbjct: 337 RDEGSF-FPPTVLENDTPDMIVMKEEVFGPVLPIAKVK 373
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 5e-43
Identities = 90/280 (32%), Positives = 133/280 (47%), Gaps = 33/280 (11%)
Query: 154 TSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS 213
+L P + EP+GVV I+ WN+PF L+L + A+AAGN VVLKP+ P ++
Sbjct: 108 PALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSAL 167
Query: 214 LLAKLLEDYVDNSA--VRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHL 269
LL +++ + D A V VV G+ L + + D + +TGS VGR +MA AA L
Sbjct: 168 LLGEIIAE-TDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATL 226
Query: 270 TPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDS 329
V+LELGGKS +V +L + M N GQ C +TT+ P S
Sbjct: 227 KRVLLELGGKSANIVLDDADLAAAAPAAVGV-CMHNAGQGC-----ALTTRLLVP---RS 277
Query: 330 LRNE----LKEFFGK----NPMESKDLSRIVNPF----HFARLASLLDEDKVSD-KIVYG 376
+E L F +P D ++ P R+ + + ++V G
Sbjct: 278 RYDEVVEALAAAFEALPVGDPA---DPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTG 334
Query: 377 GQRDEKQLK---IAPTILLDVPDDSTIMKEEIFGPLLPIV 413
G R K + PT+ DV +D I +EEIFGP+L ++
Sbjct: 335 GGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVI 374
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 1e-42
Identities = 79/259 (30%), Positives = 136/259 (52%), Gaps = 8/259 (3%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
I P+GVV I WN+PF L + A+ GN +V+KPSE P + A+L+++ +
Sbjct: 129 IFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGL 188
Query: 224 DNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
+ +V G + L K I TGS G+ +M AAA+++T V LELGGK+P
Sbjct: 189 PAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENITKVSLELGGKAP 248
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
A+V +L + + I+ + + N GQ C + + +D + ++ L ++K +
Sbjct: 249 AIVMKDADLDLAVKAIVDSR-IINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGD 307
Query: 342 PMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQ--LKIAPTILLDVPDD 397
P ++ D+ +VN ++ +++ + ++ GG+R E + PT+L +V D
Sbjct: 308 PFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQD 367
Query: 398 STIMKEEIFGPLLPIVTVS 416
I++EEIFGP+LP+V S
Sbjct: 368 MEIVQEEIFGPVLPVVKFS 386
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 154 bits (392), Expect = 2e-42
Identities = 81/290 (27%), Positives = 131/290 (45%), Gaps = 18/290 (6%)
Query: 136 CKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIA 195
+A + L K Y I EPLGVVL+I+ WNYP+L +++ VI A+
Sbjct: 90 ISIAEEALA--DIRVPEKDGFERY-----IRREPLGVVLIIAPWNYPYLTAVNAVIPALL 142
Query: 196 AGNAVVLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALLEQK-WDKILYTG 253
AGNAV+LK S P A E + +V+ + ++AL+ D + +TG
Sbjct: 143 AGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTG 202
Query: 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGV 313
S GR + AAA V LELGGK PA V +L ++ G N+GQ+C +
Sbjct: 203 SVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGA-FFNSGQSCCSI 261
Query: 314 DYIITTKDFAPKLIDSLRNELKEF-FGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD- 371
+ I + +++ +K + G S L +V+ + + + D ++
Sbjct: 262 ERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIA-DAIAKG 320
Query: 372 -KIVYGGQR----DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
+ + G +APT+L +V +M+EE FGP++ I+ V
Sbjct: 321 ARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVK 370
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 154 bits (392), Expect = 2e-42
Identities = 92/259 (35%), Positives = 134/259 (51%), Gaps = 17/259 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNS 226
EP GV I WNYP ++ V A+AAGNAVV+KP+E AP T+ LA+L E+ +
Sbjct: 116 EPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAG 175
Query: 227 AVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284
A+ VV G AE A L D I +TGS G VM AAA+++ PV LELGGKSP +V
Sbjct: 176 ALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIV 235
Query: 285 DSTINLQ----VTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
+ +L+ V II N GQ C ++ + ++++ L +
Sbjct: 236 FADADLEAALPVVVNAII-----QNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVG 290
Query: 341 NPMESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQLK----IAPTILLDVP 395
+E DL +++ R+ + + +IV GG+ E +APT+L DVP
Sbjct: 291 PGLEDPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVP 350
Query: 396 DDSTIMKEEIFGPLLPIVT 414
DS + +EEIFGP+L ++
Sbjct: 351 PDSRLAQEEIFGPVLAVMP 369
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 7e-42
Identities = 94/336 (27%), Positives = 156/336 (46%), Gaps = 22/336 (6%)
Query: 87 SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISM----TKSSCKLALKE 142
E R + + +IA+ IE EE+ + + KP E E+ + + L L +
Sbjct: 39 PLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEA-QFEVGGAVAWLRYTASLDLPD 97
Query: 143 LKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 202
+ E+ +PLGVV I WN+P LL+ + A+ AGN VVL
Sbjct: 98 EVIEDDDTR----------RVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVL 147
Query: 203 KPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRI 260
KPS P + L +L ++ + + VV G E L KI +TGS G+
Sbjct: 148 KPSPFTPLCTLKLGELAQEVLPPGVLNVVSGG-DELGPALTSHPDIRKISFTGSTATGKK 206
Query: 261 VMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320
VMA+AAK L V LELGG A+V +++ ++ G ++ N+GQ C + + +
Sbjct: 207 VMASAAKTLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFI-NSGQVCAAIKRLYVHE 265
Query: 321 DFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQ 378
+ ++L K + ++ L + N + ++ L+++ K K++ GG+
Sbjct: 266 SIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGE 325
Query: 379 RDEKQ-LKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413
+ I PTI+ D P+ S I+ EE FGP+LP++
Sbjct: 326 PLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVL 361
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 7e-42
Identities = 101/367 (27%), Positives = 175/367 (47%), Gaps = 19/367 (5%)
Query: 63 RFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF 122
R D E+A + + N R +E RM+ ++ A++++++ EE + I + KP
Sbjct: 20 RADAEEALATARAGAEN--RRALPPHE-RMAILERAADLLKKRAEEFAKIIACEGGKPIK 76
Query: 123 ETFISEISMTKSSCKLALKELKYW---TKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179
+ + E+ + +LA +E + P A A I EP+GVVL I+ +
Sbjct: 77 DARV-EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDN--RLAWTIREPVGVVLAITPF 133
Query: 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAET 238
N+P L + AIA G VVLKP+ P ++ LAK+L E V ++VV G
Sbjct: 134 NFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGEREVL 193
Query: 239 SALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRR 296
+++ + +TGS VG + A A + LELGG +P +VD +L
Sbjct: 194 GDAFAADERVAMLSFTGSAAVGEALRANAGG--KRIALELGGNAPVIVDRDADLDAAIEA 251
Query: 297 IIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPF 355
+ G + + GQ CI V I ++ + I++ +K+ +P++ D+ +++
Sbjct: 252 LAKGGF-YHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEE 310
Query: 356 HFARLASLLDED-KVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
R+ ++E + +++ GG+RD K PT+L DVP D+ + EE FGP++PI+
Sbjct: 311 AAERVERWVEEAVEAGARLLCGGERDGALFK--PTVLEDVPRDTKLSTEETFGPVVPIIR 368
Query: 415 VSIVSSA 421
A
Sbjct: 369 YDDFEEA 375
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 152 bits (385), Expect = 2e-41
Identities = 84/273 (30%), Positives = 129/273 (47%), Gaps = 19/273 (6%)
Query: 157 TTYPSSAE-----IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPAT 211
T PS + + PLGVV I+ +NYP +L+ V A+AAGN VVLKPSE P
Sbjct: 102 ETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVI 161
Query: 212 SSLLAKLLEDY-VDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKH 268
+A+++E+ + VV G AE L + + + +TGS VGR + A +H
Sbjct: 162 GLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRH 221
Query: 269 LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLID 328
L + LELGGK+P +V + +L R G +M + GQ C+ II + + +
Sbjct: 222 LKKITLELGGKNPLIVLADADLDYAVRAAAFGAFM-HQGQICMSASRIIVEEPVYDEFVK 280
Query: 329 SLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD---EDKVSD--KIVYGGQRDEKQ 383
+ +P +D ++ P R + ED V+ K++ GG+ D
Sbjct: 281 KFVARASKLKVGDP---RDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYD--G 335
Query: 384 LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
PT+L DV D I +EE FGP+ ++
Sbjct: 336 NFYQPTVLTDVTPDMRIFREETFGPVTSVIPAK 368
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 150 bits (382), Expect = 5e-41
Identities = 113/373 (30%), Positives = 179/373 (47%), Gaps = 40/373 (10%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
DVEKA + KE + +YE R ++ A ++EE+ EE I + KP +
Sbjct: 22 DVEKAIAAAKEGAKEM--KSLPAYE-RAEILERAAQLLEERREEFARTIALEAGKPIKDA 78
Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLT--TYPSSAE---------IISEPLGVV 173
E+ + +L+ E+AK L T P A I EP+GVV
Sbjct: 79 -RKEVDRAIETLRLS---------AEEAKR-LAGETIPFDASPGGEGRIGFTIREPIGVV 127
Query: 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED-YVDNSAVRVVE 232
I+ +N+P L V AIAAGNAVVLKP+ P ++ LA+LL + + A+ VV
Sbjct: 128 AAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVT 187
Query: 233 GAVAET-SALLE-QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINL 290
G+ AL+ + I +TGSP VG + A L V LELG + +VD+ +L
Sbjct: 188 GSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVIVDADADL 245
Query: 291 QVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLS 349
+ R ++G + AN GQ CI V I +D + ++ K+ +P+ E D+
Sbjct: 246 EKAVERCVSGAF-ANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVG 304
Query: 350 RIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFG 407
+++ R+ ++E V +++ GG+RD L PT+L DVP D ++ EE+F
Sbjct: 305 PMISEAEAERIEEWVEE-AVEGGARLLTGGKRDGAIL--EPTVLTDVPPDMKVVCEEVFA 361
Query: 408 PLLPIVTVSIVSS 420
P+V+++ +
Sbjct: 362 ---PVVSLNPFDT 371
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 150 bits (382), Expect = 5e-41
Identities = 108/337 (32%), Positives = 163/337 (48%), Gaps = 28/337 (8%)
Query: 91 RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTK-SSCKLALKELKYWT-- 147
R +++IA + E+ EE+ E +D KP E + + + C +Y+
Sbjct: 43 RAKYLRAIAEGVRERREELAELEARDNGKPLDE---AAWDVDDVAGC------FEYYADL 93
Query: 148 --KPEKAKTSLTTYPS---SAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 202
+ + PS A + EP+GVV +I+ WN+P L++ V A+AAG VVL
Sbjct: 94 AEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVL 153
Query: 203 KPSEIAPATSSLLAKL-LEDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGR 259
KPSE+ T LA++ E + + VV G E A L DKI +TGS G
Sbjct: 154 KPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGS 213
Query: 260 IVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGK-WMANNGQACIGVDYIIT 318
VM AAA+ + PV LELGGKSP +V +L+ + G W NNGQ C ++
Sbjct: 214 QVMQAAAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFW--NNGQICSATSRLLV 271
Query: 319 TKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYG 376
+ A ++ L + +P+E L +V+ + ++ S + K +++ G
Sbjct: 272 HESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCG 331
Query: 377 GQRDEKQLK---IAPTILLDVPDDSTIMKEEIFGPLL 410
G+R K IAPT+ DVP DS I +EEIFGP+L
Sbjct: 332 GRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVL 368
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 2e-40
Identities = 87/261 (33%), Positives = 130/261 (49%), Gaps = 21/261 (8%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE-----DY 222
EPLGVV I+ WN P LL + A+AAGN VVLKPSE PA++ LAKL E
Sbjct: 118 EPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPG 177
Query: 223 VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKS 280
V N VV G ET L + KI +TG GR + AAA++L PV LELGGKS
Sbjct: 178 VVN----VVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKS 233
Query: 281 PAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
P +V +L ++AG + A GQ C+ ++ + + ++ L +
Sbjct: 234 PNIVFDDADLDAAVNGVVAGIF-AAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVG 292
Query: 341 NPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQR-DEKQLK----IAPTILL 392
+P++ + + + ++ + + +++ GG+R L PTIL
Sbjct: 293 DPLDPETQMGPLATERQLEKVERYVA-RAREEGARVLTGGERPSGADLGAGYFFEPTILA 351
Query: 393 DVPDDSTIMKEEIFGPLLPIV 413
DV +D I +EE+FGP+L ++
Sbjct: 352 DVTNDMRIAQEEVFGPVLSVI 372
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 147 bits (372), Expect = 2e-39
Identities = 84/264 (31%), Positives = 137/264 (51%), Gaps = 8/264 (3%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYV 223
++ EP+GVV +I+ WN+PFL+ + A+AAG VV+KPSE T+ +LA+LL E +
Sbjct: 115 VLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGL 174
Query: 224 DNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
V +V G A + D + +TGS RVG+ + AAAA++L V LELGGK+P
Sbjct: 175 PAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNP 234
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
+V + +L ++ G + N G+ C ++ + A + ++ ++ +
Sbjct: 235 QIVFADADLDAAADAVVFGVYF-NAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGD 293
Query: 342 PM-ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE--KQLKIAPTILLDVPDD 397
P+ + I+N A++ +D + ++ GG+R L PTI DV D
Sbjct: 294 PLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPD 353
Query: 398 STIMKEEIFGPLLPIVTVSIVSSA 421
I +EEIFGP+L ++T V A
Sbjct: 354 MAIAREEIFGPVLSVLTFDTVDEA 377
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 145 bits (367), Expect = 8e-39
Identities = 82/264 (31%), Positives = 135/264 (51%), Gaps = 11/264 (4%)
Query: 163 AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL-LED 221
A I EPLGVV + WN+P L++ + A+AAGN+VVLKP+E +P T+ LA+L LE
Sbjct: 118 ALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEA 177
Query: 222 YVDNSAVRVVEGAVAET-SAL-LEQKWDKILYTGSPRVGRIVMAAAAK-HLTPVILELGG 278
+ + VV G AL L D + +TGS VGR + + + +L V LE GG
Sbjct: 178 GLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGG 237
Query: 279 KSPAVV-DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
KSP +V +L AG + N G+ C ++ + + ++ + +E+
Sbjct: 238 KSPNIVFADAPDLDAAAEAAAAGIF-WNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREW 296
Query: 338 FGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQLK---IAPTILL 392
+P++ + + +V+ HF ++ ++ K ++V GG+R + + PT+
Sbjct: 297 KPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFD 356
Query: 393 DVPDDSTIMKEEIFGPLLPIVTVS 416
V D I +EEIFGP+L ++T
Sbjct: 357 GVTPDMRIAREEIFGPVLSVITFD 380
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 144 bits (366), Expect = 9e-39
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 17/326 (5%)
Query: 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKAKT 154
+A +I +E+ D KP ++ + +Y W + +
Sbjct: 50 LAELILANADELARLESLDTGKPIRAARRLDVPRAADT-------FRYYAGWADKIEGEV 102
Query: 155 SLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL 214
P + EP+GVV I WN+P + + V A+AAGN VVLKP+E+ P ++
Sbjct: 103 IPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALR 162
Query: 215 LAKLLEDY-VDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTP 271
+A+L+ + + VV G A L DKI +TGS VGR +M AA +L
Sbjct: 163 IAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKR 222
Query: 272 VILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR 331
V LELGGKS +V + +L R G + N GQ C ++ + + ++
Sbjct: 223 VSLELGGKSANIVFADADLDAAVRAAATGIFY-NQGQMCTAGSRLLVHESIYDEFLERFT 281
Query: 332 NELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRD-EKQLKIAP 388
+ + +P++ K + +V+ F R+ +D + +++ GG+R + + P
Sbjct: 282 SLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEP 341
Query: 389 TILLDVPDDSTIMKEEIFGPLLPIVT 414
TI VP + I +EEIFGP++ ++
Sbjct: 342 TIFAAVPPEMRIAQEEIFGPVVSVMR 367
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 144 bits (366), Expect = 1e-38
Identities = 106/365 (29%), Positives = 178/365 (48%), Gaps = 31/365 (8%)
Query: 68 KAASLMKELRNNYNSRKTKSYEW-------RMSQIQSIANMIEEKEEEIIEAIHKDL--- 117
AAS +++ Y + EW R ++ A ++EE+ +EI+E + ++
Sbjct: 27 PAASK-EDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGST 85
Query: 118 -SKPPFETFISEISMTKSSCKLALK-ELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLV 175
K E + + +++T+ + L+ E + K + + EPLGVV V
Sbjct: 86 RIKANIE-WGAAMAITREAATFPLRMEGRILPSDVPGKEN--------RVYREPLGVVGV 136
Query: 176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLL-AKLLEDY-VDNSAVRVVEG 233
IS WN+P LS+ V A+A GNAVVLKP+ P T LL AK+ E+ + + VV G
Sbjct: 137 ISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVG 196
Query: 234 AVAET-SALLEQKWDK-ILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQ 291
A +E A +E + I +TGS VGR + A +HL V LELGG +P VV ++
Sbjct: 197 AGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKVALELGGNNPFVVLEDADID 256
Query: 292 VTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDL-SR 350
+ GK++ + GQ C+ ++ II +D + ++ +K +P + +
Sbjct: 257 AAVNAAVFGKFL-HQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGP 315
Query: 351 IVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPL 409
++N L +++ ++ GG+ + + PT+L DV +D I +EEIFGP+
Sbjct: 316 LINESQVDGLLDKIEQAVEEGATLLVGGEAEG--NVLEPTVLSDVTNDMEIAREEIFGPV 373
Query: 410 LPIVT 414
PI+
Sbjct: 374 APIIK 378
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 3e-38
Identities = 94/275 (34%), Positives = 136/275 (49%), Gaps = 47/275 (17%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNS 226
EPLGV I WNYP ++ A+A GNA+V KPS P T+ LLA++L E + +
Sbjct: 115 EPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDG 174
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284
VV+G ET LL + D K+ +TGS G+ VM+AAAK + V LELGGKSP ++
Sbjct: 175 VFNVVQGG-GETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLII 233
Query: 285 --DSTINLQVTTRRIIAGKWMAN---NGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
D+ + V G MAN GQ C T+ F + I EF
Sbjct: 234 FDDADLENAVN------GAMMANFLSQGQVCSN-----GTRVFVQRSI------KDEFTE 276
Query: 340 KNPMESKDLSRIVNPF-------------HFARLASLLDEDKVSD-KIVYGGQR--DEKQ 383
+ +K + RI +P H ++ ++ K K++ GG+R E
Sbjct: 277 RLVERTKKI-RIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDG 335
Query: 384 LK----IAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
L+ ++P +L D DD TI++EEIFGP++ I+
Sbjct: 336 LENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILP 370
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 7e-38
Identities = 81/254 (31%), Positives = 123/254 (48%), Gaps = 10/254 (3%)
Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS-LLAKLLEDY-VDNS 226
PLGVV VIS +N+P +L++ V A+A GNAVVLKP P + ++A+L E+ +
Sbjct: 110 PLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAG 169
Query: 227 AVRVVEGAVAETSALLE-QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
+ V+ G AL+E I +TGS VGR V AA +HL V LELGGK+ +V
Sbjct: 170 VLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVL 229
Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMES 345
+L + G ++ + GQ C+ + + A L + K +P
Sbjct: 230 DDADLDLAASNGAWGAFL-HQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATG 288
Query: 346 K-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPDDSTIMK 402
+ L ++N R+ +++D D V+ ++ GG D L PT+L V
Sbjct: 289 QVALGPLINARQLDRVHAIVD-DSVAAGARLEAGGTYD--GLFYRPTVLSGVKPGMPAFD 345
Query: 403 EEIFGPLLPIVTVS 416
EEIFGP+ P+
Sbjct: 346 EEIFGPVAPVTVFD 359
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 1e-37
Identities = 89/368 (24%), Positives = 152/368 (41%), Gaps = 63/368 (17%)
Query: 80 YNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLA 139
+ + + S+ R + ++ +A+++ E+++E+ I ++ KP E +E+ C+
Sbjct: 12 FLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEA-RAEVEKCAWICRYY 70
Query: 140 LKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 199
+ + + E +T A + EPLGVVL I WN+PF + AGN
Sbjct: 71 AENAEAFLADEPIETDA----GKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNT 126
Query: 200 VVLKPSEIAPATSSLLAKLLED-----------YVDNSAV-------RVVEGAVAETSAL 241
V+LK + P + + +L + +D+ V RV V
Sbjct: 127 VLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIADPRVR--GVT----- 179
Query: 242 LEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGK 301
TGS R GR V A A K+L +LELGG P +V +L + + G+
Sbjct: 180 ---------LTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGR 230
Query: 302 WMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKD----LSRIVNPFHF 357
+ N GQ+CI I +D + ++ + +PM+ L+R
Sbjct: 231 -LQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLAR------- 282
Query: 358 ARLASLLDE--DKVSD------KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGP 408
L DE ++V + ++ GG+R D PT+L DV EE+FGP
Sbjct: 283 ---KDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGP 339
Query: 409 LLPIVTVS 416
+ ++ V
Sbjct: 340 VAAVIKVK 347
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 142 bits (359), Expect = 1e-37
Identities = 88/270 (32%), Positives = 137/270 (50%), Gaps = 17/270 (6%)
Query: 160 PSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL 219
PS A I EPLGV + I WNYP ++ + A+AAGNA+V KPSE P T+ +A+++
Sbjct: 124 PSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEIM 183
Query: 220 EDY-VDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILEL 276
E+ + VV+G AE LL K+ +TG G+ +MAAAA HL V +EL
Sbjct: 184 EEAGLPKGVFNVVQGDGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGHLKHVTMEL 243
Query: 277 GGKSPAVVDSTINLQVTTRRIIAGKWMAN---NGQACIGVDYIITTKDFAPKLIDSLRNE 333
GGKSP +V +L+ + G + N GQ C + K + + L
Sbjct: 244 GGKSPLIVFDDADLESA----VDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVER 299
Query: 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQ-----LKI 386
+ +P E+ ++ +++ H ++ S +++ K + GG R E +
Sbjct: 300 TERIKLGDPFDEATEMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFV 359
Query: 387 APTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
PT+ D DD TI++EEIFGP++ ++T S
Sbjct: 360 EPTVFADCTDDMTIVREEIFGPVMTVLTFS 389
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 142 bits (360), Expect = 1e-37
Identities = 100/396 (25%), Positives = 172/396 (43%), Gaps = 50/396 (12%)
Query: 61 MQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKP 120
+ ++ +AA T E R+ + A++++E +EE+ + ++ K
Sbjct: 35 LSALEILEAAETAY--DAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKT 92
Query: 121 PFETFISEISMTKSSCK-------------LALKEL--KYWTKPEKAKTSLTTYPSSAEI 165
K + K LK L T A++
Sbjct: 93 -----------LKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKI----AQV 137
Query: 166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VD 224
EPLGVVL I +NYP L++ +I A+ GN VV KP+ LA+ D
Sbjct: 138 RREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFP 197
Query: 225 NSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282
V VV G E L + D I +TGS VG + ++LELGGK PA
Sbjct: 198 KGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHPM--KRLVLELGGKDPA 255
Query: 283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNP 342
+V +L++ + I+ G ++ +GQ C + ++ + A +L++ L+ E+ + P
Sbjct: 256 IVLPDADLELAAKEIVKGA-LSYSGQRCTAIKRVLVHESVADELVELLKEEVAKLKVGMP 314
Query: 343 ME-SKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPDDST 399
+ D++ +++P + L+D D V+ ++ GG R+ L I PT+L V D
Sbjct: 315 WDNGVDITPLIDPKSADFVEGLID-DAVAKGATVLNGGGREGGNL-IYPTLLDPVTPDMR 372
Query: 400 IMKEEIFGPLLPIVTVS-------IVSSAHFKLKAC 428
+ EE FGP+LPI+ V+ + + +++ L+A
Sbjct: 373 LAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQAS 408
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 6e-37
Identities = 110/366 (30%), Positives = 166/366 (45%), Gaps = 35/366 (9%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEI--IEAIHKDLSKPPF 122
DV+ A + RK E R + +A++IE +E+ +E++ D KP
Sbjct: 42 DVDAAVKAARAAFETGWWRKMDPRE-RGRLLNKLADLIERDRDELAALESL--DNGKP-- 96
Query: 123 ETFISEISMTKSSC-KLALKELKY---WTKPEKAKTSLTTYPSSAEIIS----EPLGVVL 174
+ + L++K L+Y W K T P ++ EP+GV
Sbjct: 97 ------LEESAKGDVALSIKCLRYYAGWAD----KIQGKTIPIDGNFLAYTRREPIGVCG 146
Query: 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL-LEDYVDNSAVRVVEG 233
I WN+P L+ + A+AAGN VVLKP+E P ++ LA+L E V +V G
Sbjct: 147 QIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPG 206
Query: 234 --AVAETSALLEQ-KWDKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTIN 289
A +A+ DKI +TGS VGR +M AAAK +L V LELGGKSP +V +
Sbjct: 207 FGPTA-GAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDAD 265
Query: 290 LQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDL- 348
L G + N GQ C I + + ++ + ++ +P +
Sbjct: 266 LDKAVEWAAFGIFF-NQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQ 324
Query: 349 SRIVNPFHFARLASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIF 406
V+ F ++ S ++ K ++ GG+R K I PT+ DV DD I KEEIF
Sbjct: 325 GPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIF 384
Query: 407 GPLLPI 412
GP++ I
Sbjct: 385 GPVVTI 390
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 6e-37
Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 24/269 (8%)
Query: 157 TTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLA 216
+ + EP+GVV I WN P L+ + A+AAG VVLKPS P + LLA
Sbjct: 125 GSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLA 184
Query: 217 KLLEDYVDNSAVRVVEGAV------AETSALL--EQKWDKILYTGSPRVGRIVMAAAAKH 268
+ E + G V E L DK+ +TGS GR + A +
Sbjct: 185 EAAE------EAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCGER 238
Query: 269 LTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKL 326
L V LELGGKS A+V D+ ++ + + NNGQ C+ + I+ + ++
Sbjct: 239 LARVTLELGGKSAAIVLDDADLD---AAVPGLVPASLMNNGQVCVALTRILVPRSRYDEV 295
Query: 327 IDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDEKQL 384
+++L + +P++ + + + + R+ + + + ++V GG R
Sbjct: 296 VEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLD 355
Query: 385 K---IAPTILLDVPDDSTIMKEEIFGPLL 410
+ + PT+ DV +D I +EEIFGP+L
Sbjct: 356 RGWFVEPTLFADVDNDMRIAQEEIFGPVL 384
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 1e-36
Identities = 90/336 (26%), Positives = 157/336 (46%), Gaps = 32/336 (9%)
Query: 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKT 154
++ IA E + +E+ +AI ++ P +++ + + A LK +
Sbjct: 64 LERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDF-------- 115
Query: 155 SLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL 214
++ ++ EP+GV +I+ WN+P + V A+AAG VVLKPSE+AP ++ +
Sbjct: 116 EFEERRGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAII 175
Query: 215 LAKLLEDY-----VDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAK 267
LA++L++ V N +V G L D + +TGS R G+ V AAA
Sbjct: 176 LAEILDEAGLPAGVFN----LVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAAD 231
Query: 268 HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLI 327
+ V LELGGKS ++ +L+ R +A AN+GQ+C ++ + +
Sbjct: 232 TVKRVALELGGKSANIILDDADLEKAVPRGVAAC-FANSGQSCNAPTRMLVPRSRYAEAE 290
Query: 328 DSLRNELKEFFGKNPMESKD-LSRIVNPFHFARLASL----LDEDKVSDKIVYGG----Q 378
+ + + +P + L + + F R+ ++E ++V GG +
Sbjct: 291 EIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEE---GARLVAGGPGRPE 347
Query: 379 RDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
E+ + PT+ DV D TI +EEIFGP+L I+
Sbjct: 348 GLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIP 383
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 1e-36
Identities = 99/333 (29%), Positives = 161/333 (48%), Gaps = 29/333 (8%)
Query: 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTK-SSCKLALKELKYWTKPEKAKTSL 156
IA+ I E EE+ + K E SEI + ++C +Y+ K +
Sbjct: 68 IADKIREDAEELARLETLNTGKTLRE---SEIDIDDVANC------FRYYAG-LATKETG 117
Query: 157 TTYPSSAEIIS----EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
Y +IS EP+GV +I+ WNYP L + + A+AAGN VV+KPSE+ P T+
Sbjct: 118 EVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTT 177
Query: 213 SLLAKLLEDY-VDNSAVRVVEGAVAET-SALLEQK-WDKILYTGSPRVGRIVMAAAAKHL 269
L +L+E+ + V +V G+ A + L E D + +TG GR +M AAA ++
Sbjct: 178 IALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGNV 237
Query: 270 TPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDS 329
V LELGGK+P +V + + + + + G + N GQ C ++ + K + +
Sbjct: 238 KKVALELGGKNPNIVFADADFETAVDQALNGVF-FNAGQVCSAGSRLLVEESIHDKFVAA 296
Query: 330 LRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQR-DEKQLK- 385
L K+ N + ++ +V+ H ++ S + K ++V GG+R +L
Sbjct: 297 LAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAK 356
Query: 386 ---IAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
+ PTI DV I++EEIFG P++TV
Sbjct: 357 GYFVEPTIFDDVDRTMRIVQEEIFG---PVLTV 386
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 5e-36
Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 8/260 (3%)
Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSA 227
LGV I WN+PF L + A+ GN +V+KPSE P + AK++++ +
Sbjct: 71 ALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGV 130
Query: 228 VRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
+V G L K + TGS G +MAAAAK++T V LELGGK+PA+V
Sbjct: 131 FNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVM 190
Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMES 345
+L + + I+ + + N+GQ C + + K + ++ L ++ NP E
Sbjct: 191 DDADLDLAVKAIVDSR-VINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAER 249
Query: 346 KDLSR--IVNPFHFARLASLLDEDKVSD-KIVYGGQRDE-KQLKIAPTILLDVPDDSTIM 401
D++ ++N R+ + ++ GG+ E K PT+LLDV + +IM
Sbjct: 250 NDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIM 309
Query: 402 KEEIFGPLLPIVTVSIVSSA 421
EE FGP+LP+V + A
Sbjct: 310 HEETFGPVLPVVAFDTLEEA 329
|
Length = 409 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 137 bits (347), Expect = 9e-36
Identities = 115/372 (30%), Positives = 171/372 (45%), Gaps = 38/372 (10%)
Query: 66 VEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125
VE A K + +R T + R +++IA I E++ E+ + D KP E
Sbjct: 51 VEAARKAFKRNKGKDWARTTGAV--RAKYLRAIAAKITERKSELAKLETLDCGKPLDE-- 106
Query: 126 ISEISMTK-SSCKLALKELKYWT-------KPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177
+ M + C +Y+ +KA SL ++ EPLGVV +I+
Sbjct: 107 -AAWDMDDVAGC------FEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLIT 159
Query: 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVA 236
WNYP L++ V A+AAG VLKPSE+A T LA + + + + VV G
Sbjct: 160 PWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGT 219
Query: 237 ETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTT 294
E A L DKI +TGS GR +M AAA+ + PV LELGGKSP +V ++L
Sbjct: 220 EAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDK-- 277
Query: 295 RRIIAGKWMA-----NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DL 348
A +W NGQ C ++ + A + ++ L K +P+E L
Sbjct: 278 ----AVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRL 333
Query: 349 SRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEE 404
+V+ + ++ + K I+ GG+R E K I PTI+ DV I +EE
Sbjct: 334 GPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREE 393
Query: 405 IFGPLLPIVTVS 416
+FGP+L + T S
Sbjct: 394 VFGPVLCVKTFS 405
|
Length = 503 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 1e-35
Identities = 107/367 (29%), Positives = 170/367 (46%), Gaps = 26/367 (7%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
DV+ A E + KT E R + + IA+ IEE E + A D KP ET
Sbjct: 39 DVDLAVDAAHEAFKTW--GKTSVAE-RANILNKIADRIEENLELLAVAETLDNGKPIRET 95
Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKT-SLTTYPSS--AEIISEPLGVVLVISTWNY 181
++I LA+ +Y+ +A+ SL+ + EPLGVV I WN+
Sbjct: 96 LAADIP-------LAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNF 148
Query: 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAET-SA 240
P L++ + A+AAGN VVLKP+ P + +L +L+ D + V VV G +E
Sbjct: 149 PLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDLLPKGVVNVVTGFGSEAGKP 208
Query: 241 LLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV--DSTINLQVTTRRI 297
L K+ +TGS VGR++M AA++L PV LELGGKSP + D+ +
Sbjct: 209 LASHPRIAKLAFTGSTTVGRLIMQYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKA 268
Query: 298 IAGKWMA--NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKD-LSRIVNP 354
G+ N G+ C + + + I+ + NP++ + + V+
Sbjct: 269 EEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSK 328
Query: 355 FHFARLASLLDEDKVSD-KIVYGGQR-----DEKQLKIAPTILLDVPDDSTIMKEEIFGP 408
++ S +D K +++ GG+R +K PT++ +D I +EEIFGP
Sbjct: 329 DQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGP 388
Query: 409 LLPIVTV 415
+L ++T
Sbjct: 389 VLAVITF 395
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 2e-35
Identities = 104/361 (28%), Positives = 175/361 (48%), Gaps = 23/361 (6%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
DV++A +K + + + + + R + + IA++I+E +E + D KP ET
Sbjct: 39 DVDRA---VKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPIRET 95
Query: 125 FISEISMTKSSCKLALKELKYWT---KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNY 181
+I LA +Y+ + E+ ++ + + ++ EP+GVV I WN+
Sbjct: 96 RAVDIP-------LAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNF 148
Query: 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAET-SA 240
PFL++ + A+AAGN VV+KPS + LAK+++D + V +V G +++
Sbjct: 149 PFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDVLPKGVVNIVTGKGSKSGEY 208
Query: 241 LLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIA 299
LL DK+ +TGS VGR V AAAK L P LELGGKS ++ N
Sbjct: 209 LLNHPGLDKLAFTGSTEVGRDVAIAAAKKLIPATLELGGKSANIIFDDANWDKALEGAQL 268
Query: 300 GKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFA 358
G + N GQ C I + + + L+ + + NP++ + VN
Sbjct: 269 G-ILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLD 327
Query: 359 RLASLLDEDKVSD-KIVYGGQR-----DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412
++ S +D K KI+ GG R +K I PT++++V +D + +EEIFGP+ +
Sbjct: 328 KILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATV 387
Query: 413 V 413
+
Sbjct: 388 I 388
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 2e-35
Identities = 83/271 (30%), Positives = 138/271 (50%), Gaps = 14/271 (5%)
Query: 158 TYPSS-----AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
T PS+ E EPLGVV +I+ WN+P + + A+A GN VV KP+E+ PA++
Sbjct: 119 TLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASA 178
Query: 213 SLLAKLLEDY-VDNSAVRVVEGAVAET-SALLEQK-WDKILYTGSPRVGRIVMAAAAKHL 269
L ++LE+ + +V G+ +E AL+E D + +TGS VGR + AAAA
Sbjct: 179 WALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARG 238
Query: 270 TPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDS 329
V LE+GGK+P VV +L + + G + GQ C +I T+ + +++
Sbjct: 239 ARVQLEMGGKNPLVVLDDADLDLAVECAVQGA-FFSTGQRCTASSRLIVTEGIHDRFVEA 297
Query: 330 LRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR---DEKQL 384
L K + ++ D+ +V+ + ++ + K+VYGG+R ++
Sbjct: 298 LVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGY 357
Query: 385 KIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
+AP + V +D I +EEIFGP+ ++ V
Sbjct: 358 YLAPALFAGVTNDMRIAREEIFGPVAAVIRV 388
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 136 bits (344), Expect = 3e-35
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 14/256 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNS 226
PLGV VIS WN+P + A+ GN VVLKP+E P ++ L ++LE+ +
Sbjct: 165 RPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPG 224
Query: 227 AVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAK------HLTPVILELGG 278
V + G E L + I +TGS VG + AAK L VI E+GG
Sbjct: 225 VVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGG 284
Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
K+ +VD +L I+ + GQ C +I + + ++ L K
Sbjct: 285 KNAIIVDEDADLDEAAEGIVRSAF-GFQGQKCSACSRVIVHESVYDEFLERLVERTKALK 343
Query: 339 GKNPMESK-DLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLK---IAPTILLDV 394
+P + + + +++ R+ ++ K +++ GG+ E + + PTI DV
Sbjct: 344 VGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEVLELAAEGYFVQPTIFADV 403
Query: 395 PDDSTIMKEEIFGPLL 410
P D + +EEIFGP+L
Sbjct: 404 PPDHRLAQEEIFGPVL 419
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 3e-35
Identities = 83/255 (32%), Positives = 125/255 (49%), Gaps = 10/255 (3%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSA 227
+P+GVV I+ WNYP +++ + A+AAGN VVLKPSEI P T+ LA+L D +
Sbjct: 137 DPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADILPPGV 196
Query: 228 VRVVEGAVAET-SALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
+ VV G A AL+ K + TGS G+ V++AAA + LELGGK+P +V
Sbjct: 197 LNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAAADSVKRTHLELGGKAPVIVF 256
Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF-FGKNPME 344
+L I + N GQ C I + L+ L + G E
Sbjct: 257 DDADLDAVVEGIRTFGYY-NAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDE 315
Query: 345 SKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQR-DEKQLKIAPTILLDVPDDSTIM 401
+L +++ H R+A ++ K ++V GG+ D K PT+L D I+
Sbjct: 316 DTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIV 375
Query: 402 KEEIFGPLLPIVTVS 416
+ E+FG P+V+V+
Sbjct: 376 QREVFG---PVVSVT 387
|
Length = 475 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 4e-34
Identities = 88/343 (25%), Positives = 147/343 (42%), Gaps = 30/343 (8%)
Query: 91 RMSQIQSIANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTK 148
R ++ +A + E EE+ I+A+ D P +S +A L Y+
Sbjct: 43 RARMLRELATRLREHAEELALIDAL--DCGNP--------VSAMLGDVMVAAALLDYFAG 92
Query: 149 PEKAKTSLT--TYPSSAEIIS----EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 202
T L T P + EP GVV I +N+P + + + +AAGN VV+
Sbjct: 93 ---LVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVV 149
Query: 203 KPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRI 260
KP E AP ++ LA+L + + ++ G A A L + D +I GS GR
Sbjct: 150 KPPEQAPLSALRLAELAREVLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRA 209
Query: 261 VMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320
+M AAA+ + V LELGGK+ +V + + +AG GQ+C + +
Sbjct: 210 IMRAAAEGIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHE 269
Query: 321 DFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQ 378
+++ + + +P + + +V+ + R+ +D K ++V GG
Sbjct: 270 SIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGG 329
Query: 379 RD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
R E + PT+ DV I +EEIFGP+L ++
Sbjct: 330 RPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWR 372
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 5e-34
Identities = 84/257 (32%), Positives = 134/257 (52%), Gaps = 9/257 (3%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL-LEDYV 223
++ +P+GVV I+ WN+P + V A+AAG VV+KPSE+ P T+ A+L L+ +
Sbjct: 156 VLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGI 215
Query: 224 DNSAVRVVEG-AVAETSALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
+ VV G A ALL K KI +TGS VG+ +MA AA + V LELGG +P
Sbjct: 216 PPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAP 275
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
+V +L V + +A K+ N+GQ C+ + I+ + K ++ +++ +
Sbjct: 276 FIVFDDADLDVAVKGALASKFR-NSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGD 334
Query: 342 PMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKI-APTILLDVPDD 397
E ++N ++ S + D VS K++ GG+R PT+L DV +D
Sbjct: 335 GFEEGVTQGPLINEAAVQKVESHVQ-DAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTED 393
Query: 398 STIMKEEIFGPLLPIVT 414
I +EE+FGP+ P+
Sbjct: 394 MLIFREEVFGPVAPLTR 410
|
Length = 498 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 131 bits (331), Expect = 1e-33
Identities = 86/341 (25%), Positives = 150/341 (43%), Gaps = 39/341 (11%)
Query: 98 IANMIEEKEEEIIEAIHKDLSKPPFETF--ISE-ISMTKSSCKLALKELKYWTKPEKAKT 154
A ++++++EE+ + +++ KP E + E I M + E +
Sbjct: 68 AAELLKKRKEELARLVTREMGKPLAEGRGDVQEAIDMA------------QYAAGEGRRL 115
Query: 155 SLTTYPSS-----AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAP 209
T PS A +P+GVV +I+ WN+P + + A+ GN VV KP+E P
Sbjct: 116 FGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTP 175
Query: 210 ATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAA 266
A + L +L + + V VV G E L + D + +TGS VG + A
Sbjct: 176 ACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCA 235
Query: 267 KHLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMA--NNGQACIGVDYIITTKDF 322
+ V LE+GGK+P +V D+ ++L + W A GQ C +I +
Sbjct: 236 RPNKRVALEMGGKNPIIVMDDADLDLALE-----GALWSAFGTTGQRCTATSRLIVHESV 290
Query: 323 APKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQR- 379
+ + K + ++ + D+ ++N ++ + + K ++ GG+R
Sbjct: 291 YDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERL 350
Query: 380 ----DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
EK + PT+ DV D I +EEIFGP++ ++ VS
Sbjct: 351 TGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVS 391
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 2e-33
Identities = 100/368 (27%), Positives = 161/368 (43%), Gaps = 37/368 (10%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
DV+ A + K + R + +A+++E + + + +I + F T
Sbjct: 45 DVDIAVEVAHAAFETDWGLKVSGSK-RGRCLSKLADLME-RNLDYLASIEALDNGKTFGT 102
Query: 125 FISEISMTKSSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNY 181
+ + + +Y W + T EP+GV I WN+
Sbjct: 103 ------AKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNF 156
Query: 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSA 240
P L+ + A+AAGN +VLKPSE+ P ++ + KL+ E + VV G
Sbjct: 157 PLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGN 216
Query: 241 LL--EQKWDKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRI 297
+ DK+ +TGS VGR VM AAAK +L V LELGGKSP +V +L+
Sbjct: 217 AISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLES----- 271
Query: 298 IAGKWMA-----NNGQACIGVDYIITTKDFAPKLIDSLRNELKEF-----FGKNPMESKD 347
A W A N+GQ C I + K + + + K+ F ++ +
Sbjct: 272 -AVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQ 330
Query: 348 LSRIVNPFHFARLASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEI 405
+S+I + R+ S ++ K + GG+R + I PTI DV +D I+KEEI
Sbjct: 331 VSQI----QYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEI 386
Query: 406 FGPLLPIV 413
FGP++ ++
Sbjct: 387 FGPVVAVI 394
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 4e-33
Identities = 80/267 (29%), Positives = 129/267 (48%), Gaps = 24/267 (8%)
Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSA 227
P GVV VIS WNYP L++ I A+ AGNAVVLKP P T+ +LL + +
Sbjct: 154 PKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDL 213
Query: 228 VRVV--EGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
+VV G V T AL++ D +++TGS GR++ A + L LELGGK+P +V
Sbjct: 214 WQVVTGPGPVVGT-ALVDNA-DYLMFTGSTATGRVLAEQAGRRLIGFSLELGGKNPMIVL 271
Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME- 344
+L + + +N GQ CI ++ I + + + + ++ M
Sbjct: 272 DDADLDKAAAGAVRACF-SNAGQLCISIERIYVHESIYDEFVRAFVAAVRA------MRL 324
Query: 345 ------SKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQR--DEKQLKIAPTILLDV 394
S D+ +++ +++ +D D V+ ++ GG+ D L PT+L V
Sbjct: 325 GAGYDYSADMGSLISEAQLETVSAHVD-DAVAKGATVLAGGKARPDLGPLFYEPTVLTGV 383
Query: 395 PDDSTIMKEEIFGPLLPIVTVSIVSSA 421
D + +EE FGP++ + V+ V A
Sbjct: 384 TPDMELAREETFGPVVSVYPVADVDEA 410
|
Length = 524 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 8e-33
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 9/280 (3%)
Query: 148 KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEI 207
KP + + ++ + + P GVV VIS WNYP L++ I A+ AGNAVVLKP
Sbjct: 98 KPRRRRGAIPVL-TRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQ 156
Query: 208 APATSSLLAKLLEDY-VDNSAVRVVEGAVAET-SALLEQKWDKILYTGSPRVGRIVMAAA 265
T+ +LL + + +VV G +E A+++ D +++TGS GR+V A
Sbjct: 157 TALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDNA-DYVMFTGSTATGRVVAERA 215
Query: 266 AKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPK 325
+ L LELGGK+P +V +L + + +N GQ C+ ++ I + +
Sbjct: 216 GRRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACF-SNAGQLCVSIERIYVHESVYDE 274
Query: 326 LIDSLRNELKEF-FGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQR---DE 381
+ + G D+ +++ R+ + +D+ V G R D
Sbjct: 275 FVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDL 334
Query: 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
PT+L V +D + EE FGP++ I V+ A
Sbjct: 335 GPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEA 374
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 2e-32
Identities = 96/368 (26%), Positives = 172/368 (46%), Gaps = 32/368 (8%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
DV++AA KE + + K+ E R + IA++IE+ +EI D +P
Sbjct: 39 DVDRAAKAAKEAFKRW--AELKAAE-RKRYLHKIADLIEQHADEIAVLECLDCGQP---- 91
Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEI---ISEPLGVVLVISTWNY 181
+ T+ A + +++ + TYP + + P+G V +I+ WN
Sbjct: 92 ----LRQTRQQVIRAAENFRFFADKCEEAMDGRTYPVDTHLNYTVRVPVGPVGLITPWNA 147
Query: 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAET-S 239
PF+LS + A+A GN VVLKP+E +P T++ LA++ E + + +V G E
Sbjct: 148 PFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGK 207
Query: 240 ALLEQKWDKIL-YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRII 298
AL+ K + +TG G I+M A L +ELGGKSP +V +L+ R +
Sbjct: 208 ALVAHPDVKAVSFTGETATGSIIMRNGADTLKRFSMELGGKSPVIVFDDADLE---RALD 264
Query: 299 AGKWM--ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPF 355
A +M + NG+ C ++ + A ++ L ++ +P++ ++ +++P
Sbjct: 265 AVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPE 324
Query: 356 HFARLASLLD-EDKVSDKIVYGGQRDEKQLK--------IAPTILLDVPDDSTIMKEEIF 406
H A++ ++ +K I+ GG+R + PT+ + I +EEIF
Sbjct: 325 HLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIF 384
Query: 407 GPLLPIVT 414
GP+L ++
Sbjct: 385 GPVLTVIP 392
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 2e-32
Identities = 82/259 (31%), Positives = 129/259 (49%), Gaps = 11/259 (4%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNS 226
PLGV +VIS WN+PF + + AI AGN V+LKP+ P ++ ++LE+ +
Sbjct: 170 IPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAG 229
Query: 227 AVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAK------HLTPVILELGG 278
V V G+ +E L K I +TGS VG + AAK L VI E+GG
Sbjct: 230 VVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGG 289
Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
K VVD +L + I+A + +GQ C I +D ++++ + KE
Sbjct: 290 KDAIVVDEDADLDLAAESIVASAF-GFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELT 348
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTILLDVPDD 397
NP ++ + ++N F ++ S ++ K ++V GG+ D+ + I PTI DV
Sbjct: 349 VGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPK 408
Query: 398 STIMKEEIFGPLLPIVTVS 416
+ IM+EEIFGP++ +
Sbjct: 409 ARIMQEEIFGPVVAFIKAK 427
|
Length = 514 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 126 bits (320), Expect = 2e-32
Identities = 103/380 (27%), Positives = 177/380 (46%), Gaps = 31/380 (8%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
D+E+A + + R ++ R + + +EE+ EE+ E I + KP +
Sbjct: 22 DIEEAIAAAVKAFRP--MRALPAHR-RAAILLHCVARLEERFEELAETIVLEAGKP-IKD 77
Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAE---IISE-PLGVVLVISTWN 180
E++ + ++A +E T+ L ++ P+G V I+ +N
Sbjct: 78 ARGEVARAIDTFRIAAEEA---TRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFN 134
Query: 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETS 239
+P L V AIAAG VLKP+ P ++ +L ++L E + A V+ + +
Sbjct: 135 FPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVLPCSRDDAD 194
Query: 240 ALLEQKWDKIL-YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRII 298
L+ + K+L +TGSP VG + A A K V+LELGG + +VDS +L +RII
Sbjct: 195 LLVTDERIKLLSFTGSPAVGWDLKARAGKK--KVVLELGGNAAVIVDSDADLDFAAQRII 252
Query: 299 AGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHF 357
G + GQ+CI V ++ + + L +K +P + D+ +++
Sbjct: 253 FGAF-YQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEA 311
Query: 358 ARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVT- 414
R+ ++E V K++ GG+RD L PTIL DVP D + EE+FGP++ V
Sbjct: 312 ERVEGWVNE-AVDAGAKLLTGGKRDGALL--EPTILEDVPPDMEVNCEEVFGPVV-TVEP 367
Query: 415 -------VSIVSSAHFKLKA 427
++ V+ + F L+A
Sbjct: 368 YDDFDEALAAVNDSKFGLQA 387
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 6e-32
Identities = 107/363 (29%), Positives = 164/363 (45%), Gaps = 55/363 (15%)
Query: 84 KTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL 143
+ YE R + A+++E+ +E+ D KP + +E+ + A +
Sbjct: 61 RMTGYE-RSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPL-------AARLF 112
Query: 144 KY---WTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAV 200
+Y W T P + EP+GVV I WN+P L+ V A+A GN +
Sbjct: 113 RYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTI 172
Query: 201 VLKPSEIAPATSSLLAKL-LEDYVDNSAVRVVEGAVAETSALLEQKW--DKILYTGSPRV 257
VLKP+E P ++ L AKL E + + + +V G A + DK+ +TGS V
Sbjct: 173 VLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEV 232
Query: 258 GRIVMAAAAK-HLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMA---NNGQACI 311
G+I+M AAK +L PV LELGGKSP +V D+ ++ + + A N GQ C
Sbjct: 233 GKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVD------KAVELAHFALFFNQGQCCC 286
Query: 312 GVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIV-NPF-------------HF 357
++ F + I EF K +++ L R+V +PF F
Sbjct: 287 A-----GSRTFVHESI------YDEFVEK--AKARALKRVVGDPFRKGVEQGPQVDKEQF 333
Query: 358 ARLASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
++ S ++ K ++ GG R K I PTI DV DD I ++EIFGP+ I+
Sbjct: 334 EKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKF 393
Query: 416 SIV 418
V
Sbjct: 394 KTV 396
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 126 bits (317), Expect = 7e-32
Identities = 84/285 (29%), Positives = 138/285 (48%), Gaps = 15/285 (5%)
Query: 143 LKY---WTKPEKAKTSLTTYPS------SAEIISEPLGVVLVISTWNYPFLLSLDPVIGA 193
L+Y W +T + PS +A EP+GVV I WN+ ++++ + A
Sbjct: 107 LRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAA 166
Query: 194 IAAGNAVVLKPSEIAPATSSLLAKL-LEDYVDNSAVRVVEGAVAETSALLEQ-KWDKILY 251
+A G +V+KPSE P T +A+L E + + + VV G A + L+ K+ +
Sbjct: 167 LATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSF 226
Query: 252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACI 311
TGS G+ + AA LT V LELGGK+ A ++ ++ ++ + GQ C
Sbjct: 227 TGSVATGKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFL-HQGQVCA 285
Query: 312 GVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVS 370
+ + +L+ L+ L F +PM ES + N HF ++ S LD+ +
Sbjct: 286 APERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAE 345
Query: 371 -DKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413
D+IV GG+ + + PT++L DS +M+EE FGP++ V
Sbjct: 346 GDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFV 390
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 9e-32
Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 24/265 (9%)
Query: 169 PLGVVLVISTWNYPFLLSLDPVIG-----AIAAGNAVVLKPSEIAPATSSLLAKLLEDYV 223
PLGVV VI+ +N+P V G A+ GN VV KPSE P T+ + K+L + +
Sbjct: 133 PLGVVGVITAFNFPV-----AVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVL 187
Query: 224 D-----NSAVRVVEGAVAETSALLE--QKWDKILYTGSPRVGRIVMAAAAKHLTPVILEL 276
+ V +V G + LL + + +TGS VGR V A+ V+LEL
Sbjct: 188 EKNGLPPGVVNLVTGG-GDGGELLVHDPRVPLVSFTGSTEVGRRVGETVARRFGRVLLEL 246
Query: 277 GGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE 336
GG + +V +L + R ++ + GQ C +I + + ++ L K+
Sbjct: 247 GGNNAIIVMDDADLDLAVRAVLFAA-VGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQ 305
Query: 337 FFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGG---QRDEKQLKIAPTIL 391
+P++ + ++N + + ++ K ++ GG E + PTI+
Sbjct: 306 VRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIV 365
Query: 392 LDVPDDSTIMKEEIFGPLLPIVTVS 416
V DD+ I++EE F P+L ++
Sbjct: 366 TGVTDDARIVQEETFAPILYVIKFD 390
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 1e-31
Identities = 108/382 (28%), Positives = 171/382 (44%), Gaps = 35/382 (9%)
Query: 45 SFSCRCSAT--MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMI 102
SF AT + A Q + DV+ A + R + S R + IA I
Sbjct: 38 SFPTINPATGEVLASVLQAEEEDVDAA---VAAARTAFESWSALPGHVRARHLYRIARHI 94
Query: 103 EEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKAKTSLT 157
++ + +E++ D KP E+ +I L + + W + T L
Sbjct: 95 QKHQRLFAVLESL--DNGKPIRESRDCDI-------PLVARHFYHHAGWA--QLLDTELA 143
Query: 158 TYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAK 217
+ +P+GVV I WN+P L+ + A+A GN VVLKP+E P T+ L A+
Sbjct: 144 GW--------KPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAE 195
Query: 218 LLEDY-VDNSAVRVVEGAVAETSALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILE 275
+ + + + +V G + SAL DK+ +TGS VGR + A A + LE
Sbjct: 196 ICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTGKKLSLE 255
Query: 276 LGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335
LGGKSP +V +L I+ W N GQ C ++ + A +LI L+ +
Sbjct: 256 LGGKSPFIVFDDADLDSAVEGIVDAIWF-NQGQVCCAGSRLLVQESVAEELIRKLKERMS 314
Query: 336 EFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVY--GGQRDEKQLKIAPTILL 392
+P++ + D+ IV+P R+ L++E + V+ G K PT+
Sbjct: 315 HLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFT 374
Query: 393 DVPDDSTIMKEEIFGPLLPIVT 414
+VP S I +EEIFGP+L ++T
Sbjct: 375 NVPPASRIAQEEIFGPVLVVLT 396
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 3e-31
Identities = 97/280 (34%), Positives = 133/280 (47%), Gaps = 58/280 (20%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL-----LEDY 222
EPLGV I WNYP ++ A+AAGNA++ KPSE+ P T+ LA++ L D
Sbjct: 141 EPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDG 200
Query: 223 VDNSAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKS 280
V N VV+G A L + D K+ +TG G+ VMAAAA L V +ELGGKS
Sbjct: 201 VFN----VVQGD-GRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAASLKEVTMELGGKS 255
Query: 281 PAVV--DSTINLQVTTRRIIAGKWMAN---NGQACIGVDYIIT--TKDFAPKLIDSLRNE 333
P +V D+ ++ R +AN +GQ C T T+ F K
Sbjct: 256 PLIVFDDADLD------RAADIAMLANFYSSGQVC-------TNGTRVFVQK-------S 295
Query: 334 LKEFFGKNPMESKDLSRIVNPFH----FARLASLLDEDKVSDKI----------VYGGQR 379
+K F +E + RI +P F L S DKV I + GG+R
Sbjct: 296 IKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGER 355
Query: 380 -DEKQLK----IAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
E +APT+ D DD TI++EEIFGP++ ++T
Sbjct: 356 LTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLT 395
|
Length = 488 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 3e-31
Identities = 83/261 (31%), Positives = 128/261 (49%), Gaps = 14/261 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNS 226
EPLGVVL I+ +N+P + AIAA N +VLKPSE P ++ LA LL E +
Sbjct: 119 EPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPD 178
Query: 227 AVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAV 283
+ VV G E L D + +TG VG+ + A A K +LELGG P +
Sbjct: 179 MLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAGYKRQ---LLELGGNDPLI 235
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
V +L+ +AG + AN+GQ C V I+ + A + +D L + +PM
Sbjct: 236 VMDDADLERAATLAVAGSY-ANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPM 294
Query: 344 -ESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPDDSTI 400
+ D+ +++ A E+ ++ +++ G QR APT+L VP D+ +
Sbjct: 295 DPATDMGTVIDE-EAAIQIENRVEEAIAQGARVLLGNQRQGALY--APTVLDHVPPDAEL 351
Query: 401 MKEEIFGPLLPIVTVSIVSSA 421
+ EE FGP+ P++ V + A
Sbjct: 352 VTEETFGPVAPVIRVKDLDEA 372
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 2e-30
Identities = 83/356 (23%), Positives = 157/356 (44%), Gaps = 19/356 (5%)
Query: 80 YNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKL- 138
+ + K E R + A+++ + E+I + ++ K E I +++ +
Sbjct: 68 FKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVEA-IDDVAEAIDFIRYY 126
Query: 139 ALKELKYWTKPEKAKTSLTTYPSSA-EIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAG 197
A L+ + + YP E LG +VIS WN+P + ++ +A G
Sbjct: 127 ARAALRLRYPAVE----VVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVG 182
Query: 198 NAVVLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGS 254
N V+ KP+E A + ++ E V+ + G E A L ++ I +TGS
Sbjct: 183 NTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGS 242
Query: 255 PRVGRIVMAAAAKHLT------PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQ 308
G+ + AAA+ + +E GGK+ +VD T + ++ ++ + GQ
Sbjct: 243 LETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAF-GFQGQ 301
Query: 309 ACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDED 367
C +I T+ +++ L + P E+ DL +++ A++ S ++
Sbjct: 302 KCSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHG 361
Query: 368 KVSDKIVYGGQRDEKQ-LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAH 422
K ++V GG+R E + +APT++ +VP + I +EEIFGP+L ++ A
Sbjct: 362 KNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAE 417
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 5e-30
Identities = 78/261 (29%), Positives = 122/261 (46%), Gaps = 25/261 (9%)
Query: 166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VD 224
+ +PLGVV VIS WN P LL V A+A GN VV+KPSE P T++LL +++ V
Sbjct: 136 VRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVP 195
Query: 225 NSAVRVVEG-AVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
VV G L + D I +TG R G +M AAA + PV ELGGK+
Sbjct: 196 KGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGVKPVSFELGGKNA 255
Query: 282 AVVDSTINLQVTTRRIIAG---KWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
A+V + + +AG N GQ C+G + + + + + +L+ +
Sbjct: 256 AIVFADCDFDAA----VAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLK 311
Query: 339 GKNPME-SKDLSRIVNPFHFARLASLLD---EDKVSDKIVYGG-------QRDEKQLKIA 387
P + + ++ +++ H ++ S E+ + +V GG +
Sbjct: 312 IGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGAT--VVTGGGVPDFGDALAGGAW-VQ 368
Query: 388 PTILLDVPDDSTIMKEEIFGP 408
PTI +PD + ++ EEIFGP
Sbjct: 369 PTIWTGLPDSARVVTEEIFGP 389
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 119 bits (300), Expect = 2e-29
Identities = 85/254 (33%), Positives = 122/254 (48%), Gaps = 12/254 (4%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNS 226
EP+GV I WN+P L++ + A+A GN VVLKP+E P T+ LA L+ E
Sbjct: 144 EPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPG 203
Query: 227 AVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAV 283
V VV G A + DK+ +TGS VG+++ AA K +L V LELGGKSP +
Sbjct: 204 VVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNI 263
Query: 284 V--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
V D+ ++ V N GQ C + + + K+ N
Sbjct: 264 VFADADLDYAVEQAHEAL---FFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGN 320
Query: 342 PMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDS 398
P + K + ++ F ++ L++ K K+ GG+R +K I PT+ DV DD
Sbjct: 321 PFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDM 380
Query: 399 TIMKEEIFGPLLPI 412
I KEEIFGP+ I
Sbjct: 381 RIAKEEIFGPVQQI 394
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 2e-29
Identities = 86/340 (25%), Positives = 151/340 (44%), Gaps = 36/340 (10%)
Query: 91 RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
R + +A+ E E + + + K E EIS S EL+Y+
Sbjct: 44 RARVLLELADAFEANAERLARLLALENGKILGEARF-EISGAIS-------ELRYY---- 91
Query: 151 KAKTSLTTYPSSAE--------IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 202
A + T E ++ EP+GV +I WN P +L + + A+AAG VV+
Sbjct: 92 -AGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVV 150
Query: 203 KPSEIAPATSSLLAKLLE--DYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVG 258
KP+ ++ + ++L + V + + +E +A L D I +TGS G
Sbjct: 151 KPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATG 210
Query: 259 RIVMAAAAKHLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYI 316
R +MAAAA L + LELGGK+P +V D+ ++ + + GQ C+ +
Sbjct: 211 RAIMAAAAPTLKRLGLELGGKTPCIVFDDADLDAALP---KLERALTIFAGQFCMAGSRV 267
Query: 317 ITTKDFAPKLIDSLRNELKEF-FGKNPMESKDLSRIVNPFHFARLASLLDE--DKVSDKI 373
+ + A ++ D L L G + D+ +++ + R+ +++ ++ +
Sbjct: 268 LVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVV 327
Query: 374 VYGGQRDEKQLK---IAPTILLDVPDDSTIMKEEIFGPLL 410
+ GG E K + PT+L D+ I++EEIFGP+L
Sbjct: 328 LRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVL 367
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 9e-29
Identities = 86/268 (32%), Positives = 124/268 (46%), Gaps = 22/268 (8%)
Query: 163 AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE-- 220
+PLGVV I+ +N+P ++ L AIA GN VLKPSE P + LA+LL+
Sbjct: 130 TYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEA 189
Query: 221 ---DYVDNSAVRVVEGAVAETSALLEQKWDK-ILYTGSPRVGRIVMAAAAKHLTPVILEL 276
D V N VV G +ALL+ K + + GS VG + AA + V
Sbjct: 190 GLPDGVLN----VVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAANGKRVQALG 245
Query: 277 GGKSPAVVDSTINLQVTTRRIIAGKW-MANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335
G K+ AVV +L+ T ++ + A GQ C+ + + D A + I L K
Sbjct: 246 GAKNHAVVMPDADLEQTANALVGAAFGAA--GQRCMALSVAVAVGDEADEWIPKLVERAK 303
Query: 336 EF-FGKNPMESKDLSRIVNPFHFARLASLLDE-DKVSDKIVYGGQRDEKQLK------IA 387
+ G D+ +++P R+ L++ + K+V G R K +
Sbjct: 304 KLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDG-RGVKVPGYENGNFVG 362
Query: 388 PTILLDVPDDSTIMKEEIFGPLLPIVTV 415
PTIL +V D I KEEIFGP+L IV V
Sbjct: 363 PTILDNVTPDMKIYKEEIFGPVLSIVRV 390
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 2e-28
Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VD 224
+ P GV +VIS WN+PF + + + I GN VVLKP+E AP ++ ++LE+ +
Sbjct: 164 VYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLP 223
Query: 225 NSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAK------HLTPVILEL 276
V+ V G+ +E L K I +TGS VG + AAK HL VI E+
Sbjct: 224 KGVVQFVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQKHLKRVIAEM 283
Query: 277 GGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN---E 333
GGK +VD ++++ + + GQ C + + K+ D + E
Sbjct: 284 GGKDTVIVDEDADIELAAQSAFTSAF-GFAGQKCSAGSRAVVHE----KVYDEVVERFVE 338
Query: 334 LKEFFGKNPMESKD--LSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTI 390
+ E P +S D + +++ F ++ ++ K ++V GG D+ + I PTI
Sbjct: 339 ITESLKVGPPDSADVYVGPVIDQKSFNKIMEYIEIGKAEGRLVSGGCGDDSKGYFIGPTI 398
Query: 391 LLDVPDDSTIMKEEIFGPLLPIVTVS 416
DV + + +EEIFGP++ + S
Sbjct: 399 FADVDRKARLAQEEIFGPVVAFIRAS 424
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 3e-28
Identities = 95/363 (26%), Positives = 158/363 (43%), Gaps = 39/363 (10%)
Query: 91 RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
R S ++ N++ E ++++ I + KP + E L+ W E
Sbjct: 43 RSSLLRKWYNLMMENKDDLARLITLENGKP-----LKEAKGEILYAASFLE----WFAEE 93
Query: 151 KAKTSLTTYPSSAE-----IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 205
+ T PS +I +P+GV I+ WN+P + A+AAG VV+KP+
Sbjct: 94 AKRVYGDTIPSPQSDKRLIVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPA 153
Query: 206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAE-------TSALLEQKWDKILYTGSPRV 257
E P ++ LA+L E + + V+ G+ A+ TS L+ KI +TGS V
Sbjct: 154 EQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGNVLTTSPLVR----KISFTGSTNV 209
Query: 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317
G+I+M +A + V +ELGG +P +V +L +A K+ N GQ C+ + +
Sbjct: 210 GKILMKQSASTVKKVSMELGGNAPFIVFDDADLDQAVEGAMASKF-RNAGQTCVCANRLY 268
Query: 318 TTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIV 374
+ L +K+ N ++ ++N ++ + D V K+V
Sbjct: 269 VHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIA-DAVEKGAKVV 327
Query: 375 YGGQRDEKQLK-IAPTILLDVPDDSTIMKEEIFGPLLPIVT-------VSIVSSAHFKLK 426
GG+R E PT+L +V D + KEE FGPL P+ ++I + L
Sbjct: 328 TGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPLAPVFKFDDEEEVIAIANDTEVGLA 387
Query: 427 ACF 429
A F
Sbjct: 388 AYF 390
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 114 bits (286), Expect = 1e-27
Identities = 79/256 (30%), Positives = 124/256 (48%), Gaps = 11/256 (4%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVD 224
I +PLGVV I+ WNYP +++ + A+AAGN VVLKPSEI P T+ LA+L +D
Sbjct: 133 IRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFP 192
Query: 225 NSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282
V ++ G L +K + TGS G +++ A + +ELGGK+P
Sbjct: 193 AGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIKRTHMELGGKAPV 252
Query: 283 VV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
+V D+ I+ V R N GQ C I + L++ L +
Sbjct: 253 IVFDDADIDAVVEGVRTFG---FYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATLKSG 309
Query: 341 NPM-ESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDE-KQLKIAPTILLDVPD 396
P ES +L + + H R+ ++E K K++ GG++ + APT+L
Sbjct: 310 APDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQ 369
Query: 397 DSTIMKEEIFGPLLPI 412
D I+++E+FGP++ I
Sbjct: 370 DDAIVQKEVFGPVVSI 385
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 1e-27
Identities = 79/260 (30%), Positives = 137/260 (52%), Gaps = 7/260 (2%)
Query: 163 AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-ED 221
A I+ EP+GV+ I WN+P LL+ + A+AAGN+V+LKPSE +P ++ LA L E
Sbjct: 151 AMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEA 210
Query: 222 YVDNSAVRVVEGAVAET-SAL-LEQKWDKILYTGSPRVGRIVMA-AAAKHLTPVILELGG 278
+ + + VV G E AL D I +TGS R G+ ++ A ++ V LE GG
Sbjct: 211 GLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGG 270
Query: 279 KSPAVVDSTI-NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
KS +V + +LQ AG + N GQ CI ++ + A + + L+ + + +
Sbjct: 271 KSANIVFADCPDLQQAASATAAGIFY-NQGQVCIAGTRLLLEESIADEFLALLKQQAQNW 329
Query: 338 FGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPD 396
+P++ + + +++ H + S + E + +++ G+ I PTI +DV
Sbjct: 330 QPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDP 389
Query: 397 DSTIMKEEIFGPLLPIVTVS 416
++++ +EEIFGP+L + +
Sbjct: 390 NASLSREEIFGPVLVVTRFT 409
|
Length = 494 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 1e-26
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 12/263 (4%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNS 226
EP+GVV I WN+P + V A+AAG +V+KP+E P ++ A L + V +
Sbjct: 157 EPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDG 216
Query: 227 AVRVVEGAVAETSALLEQKW--DKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAV 283
+ VV G A + DK+ +TGS VGR +M AAA +L V LELGGKSP +
Sbjct: 217 VINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLL 276
Query: 284 V--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
+ D+ +++ V + N G+ C+ + + + + L + K++ +
Sbjct: 277 IFDDADVDMAVDLALLGI---FYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGD 333
Query: 342 PMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDS 398
P + + V+ F ++ S ++ K ++ GG+ +K I PTI DV +D
Sbjct: 334 PFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDM 393
Query: 399 TIMKEEIFGPLLPIVTVSIVSSA 421
I ++EIFGP++ ++ V A
Sbjct: 394 KIAQDEIFGPVMSLMKFKTVEEA 416
|
Length = 501 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 5e-26
Identities = 99/370 (26%), Positives = 167/370 (45%), Gaps = 35/370 (9%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
D+E A + + KT E R + + IA+ +E E + A D KP ET
Sbjct: 39 DIELALDAAHAAKEAWG--KTSVAE-RANILNKIADRMEANLEMLAVAETWDNGKPVRET 95
Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKT-SLTTYPSS--AEIISEPLGVVLVISTWNY 181
++I LA+ +Y+ +A+ S++ + A EPLGVV I WN+
Sbjct: 96 LAADIP-------LAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNF 148
Query: 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSAL 241
P L++ + A+AAGN VVLKP+E PA+ +L +L+ D + V VV G E
Sbjct: 149 PLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDLLPPGVVNVVNGFGLEAGKP 208
Query: 242 L--EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV--------DSTINLQ 291
L ++ K+ +TG GR++M A++++ PV LELGGKSP + D+ +
Sbjct: 209 LASSKRIAKVAFTGETTTGRLIMQYASENIIPVTLELGGKSPNIFFADVMDADDAFFDKA 268
Query: 292 VTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKD-LSR 350
+ + A N G+ C + + + ++ +K NP++++ +
Sbjct: 269 LEGFVMFA----LNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTETMIGA 324
Query: 351 IVNPFHFARLASLLDEDKVSD-KIVYGGQR-----DEKQLKIAPTILLDVPDDSTIMKEE 404
+ ++ S +D K +++ GG+R PT + I +EE
Sbjct: 325 QASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKG-GNKMRIFQEE 383
Query: 405 IFGPLLPIVT 414
IFGP+L + T
Sbjct: 384 IFGPVLAVTT 393
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 5e-26
Identities = 74/254 (29%), Positives = 128/254 (50%), Gaps = 12/254 (4%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL-LEDYVDNS 226
EP+GV ++ WNYP ++ + +AAGN VVLKP+++ P T+ A+L ++
Sbjct: 146 EPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKG 205
Query: 227 AVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAV 283
+ ++ G+ + L D K+ +TGS +G+ +M + A +L V LELGGKSP +
Sbjct: 206 VINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLI 265
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM 343
+ + ++ R ++ + N G+ CI + + + + + E+K+ +P+
Sbjct: 266 IFADCDMDKAVRMGMSSVFF-NKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPL 324
Query: 344 ESKDLSRIVNPFHFARLASLLD--EDKVSD--KIVYGGQR-DEKQLKIAPTILLDVPDDS 398
+ N H A L L++ E V + +VYGG++ D PT+ DV D
Sbjct: 325 DRSTDHGPQN--HKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHM 382
Query: 399 TIMKEEIFGPLLPI 412
I KEE FGP++ I
Sbjct: 383 FIAKEESFGPIMII 396
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 5e-25
Identities = 102/354 (28%), Positives = 156/354 (44%), Gaps = 49/354 (13%)
Query: 84 KTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL 143
K +YE R + A+++E+ +E+ D KP ++ +E+ M +
Sbjct: 115 KMTAYE-RSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMF-------ARLF 166
Query: 144 KY---WTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAV 200
+Y W T P + + EP+GV I WN+P L+ V A+A GN +
Sbjct: 167 RYYAGWADKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTI 226
Query: 201 VLKPSEIAPATSSLLAKLL-EDYVDNSAVRVVEGAVAETSALLEQKW--DKILYTGSPRV 257
VLK +E P ++ AKLL E + + VV G A L DK+ +TGS
Sbjct: 227 VLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDT 286
Query: 258 GRIVMAAAAK-HLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVD 314
G+IV+ AAK +L PV LELGGKSP +V D+ ++ V + N GQ C
Sbjct: 287 GKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAV---ELAHFALFFNQGQCCCA-- 341
Query: 315 YIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIV-NPF-------------HFARL 360
++ F + + EF K +++ L R+V +PF F ++
Sbjct: 342 ---GSRTFVHERV------YDEFVEKA--KARALKRVVGDPFKKGVEQGPQIDSEQFEKI 390
Query: 361 ASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412
+ S + GG R K I PT+ +V DD I ++EIFGP+ I
Sbjct: 391 LRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSI 444
|
Length = 538 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 6e-25
Identities = 79/268 (29%), Positives = 129/268 (48%), Gaps = 20/268 (7%)
Query: 160 PSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL 219
P+ + E +GVV I+ WN+P ++L + A+AAGN VVLKP+ P +++L +L+
Sbjct: 132 PTRRTLRREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAPDTPWCAAVLGELI 191
Query: 220 EDYVDNSA--VRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILE 275
++ D V +V + ALL + + D + +TGS GR VMA AA L V LE
Sbjct: 192 AEHTDFPPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVMADAAATLKKVFLE 251
Query: 276 LGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAP--KLIDSLRNE 333
LGGKS +V +L + A + GQ C ITT+ P + +++
Sbjct: 252 LGGKSAFIVLDDADLAAAC-SMAAFTVCMHAGQGC-----AITTRLVVPRARYDEAVAAA 305
Query: 334 LKEFFGKNPMESKDLSRIVNPFHFA----RLASLLD-EDKVSDKIVYGGQRDEKQLK--- 385
P + D + P A R+ S LD + GG R + +
Sbjct: 306 AATMGSIKPGDPADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPADRDRGFF 365
Query: 386 IAPTILLDVPDDSTIMKEEIFGPLLPIV 413
+ PT++ + +++ + +EEIFGP+L ++
Sbjct: 366 VEPTVIAGLDNNARVAREEIFGPVLTVI 393
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 3e-24
Identities = 75/279 (26%), Positives = 134/279 (48%), Gaps = 23/279 (8%)
Query: 156 LTTYPSSAEIIS--EPL-GVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
LT + + ++ + EPL GV+ I+ +N+P + AIA N +V+KPSE P ++
Sbjct: 123 LTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSA 182
Query: 213 SLLAKLL-EDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHL 269
LA +L E + ++VV G E + L D + +TG +G+ + AA
Sbjct: 183 LYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYI--AARAGY 240
Query: 270 TPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDS 329
+LELGG P +V +L + G + N+GQ C V ++ + A + +
Sbjct: 241 RRQVLELGGNDPLIVMEDADLDRAADLAVKGSY-KNSGQRCTAVKRMLVQESVADRFTEL 299
Query: 330 LRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSD------KIVYGGQRDEK 382
L + + + +PM S D+ +++ A++L E +V++ +++ G RD
Sbjct: 300 LVEKTRAWRYGDPMDPSVDMGTVID-----EAAAILFEARVNEAIAQGARLLLGNVRDGA 354
Query: 383 QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
APT+L V T+++EE FGP+ P++ + A
Sbjct: 355 LY--APTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDA 391
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 2e-23
Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 27/264 (10%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
+I +P+GV I+ WN+P + A+AAG +VLKP+ P ++ LA+L +
Sbjct: 142 VIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGI 201
Query: 224 DNSAVRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
VV G+ L K+ +TGS +GR +M AK + V LELGG +P
Sbjct: 202 PAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 261
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD----FAPKLIDSLR-----N 332
+V +L +A K+ N GQ C+ + + FA KL ++ +
Sbjct: 262 FIVFDDADLDKAVEGALASKFR-NAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGD 320
Query: 333 ELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKI-AP 388
L++ P+ + K ++++ H A D + ++V GG+ E P
Sbjct: 321 GLEKGVTIGPLIDEKAVAKVEE--HIA--------DALEKGARVVCGGKAHELGGNFFQP 370
Query: 389 TILLDVPDDSTIMKEEIFGPLLPI 412
TIL+DVP ++ + KEE FGPL P+
Sbjct: 371 TILVDVPANAKVAKEETFGPLAPL 394
|
Length = 482 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 4e-23
Identities = 80/353 (22%), Positives = 141/353 (39%), Gaps = 48/353 (13%)
Query: 87 SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYW 146
S E R + ++ A +++ +EE+ I ++ KP +E +E++ +++K
Sbjct: 20 SLEERAAILRRFAELLKANKEELARLISRETGKPLWEA-QTEVAAMAGKIDISIKAYHER 78
Query: 147 TKPEKAKT----SLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVL 202
T ++ + P GV+ V +N+P L ++ A+ AGN VV
Sbjct: 79 TGERATPMAQGRAVLRH--------RPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVF 130
Query: 203 KPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQKW-DKILYTGSPRVGRI 260
KPSE+ PA + L+ +L E+ + + +V+G AL + D +L+TGS G +
Sbjct: 131 KPSELTPAVAELMVELWEEAGLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLL 190
Query: 261 VMAAAAKHLTPVI--LELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIIT 318
+ A I LE+GG +P VV ++ I+ ++ GQ C +I
Sbjct: 191 LHRQFAGR-PGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLT-AGQRCTCARRLIV 248
Query: 319 TKD-FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPF-HFARLASLLDEDKVSDKI--- 373
++ L K RI P + L+ + +
Sbjct: 249 PDGAVGDAFLERLVEAAKRL------------RIGAPDAEPPFMGPLIIAAAAARYLLAQ 296
Query: 374 ----VYGGQ-------RDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
GG+ ++P I +DV D + + EEIFGPLL +
Sbjct: 297 QDLLALGGEPLLAMERLVAGTAFLSPGI-IDVTDAADVPDEEIFGPLLQVYRY 348
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 96.5 bits (240), Expect = 1e-21
Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 15/267 (5%)
Query: 166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VD 224
I +PLGV I+ +N+P ++ L AIA GN VLKPSE P+ + LA+L +
Sbjct: 133 IRQPLGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAP 192
Query: 225 NSAVRVVEGAVAETSALLEQKWDK-ILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283
+ + VV G LLE K + + GS +GR + + H V G K+ V
Sbjct: 193 DGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAHGKRVQALGGAKNHMV 252
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYII---TTKDFAPKLIDSLRNELKEFFGK 340
V + ++ + A GQ C+ + + ++ P++ + +++ G
Sbjct: 253 VMPDADKDAAADALVGAAYGA-AGQRCMAISAAVLVGAADEWVPEIRERAE-KIRIGPGD 310
Query: 341 NPMESKDLSRIVNPFHFARLASLLDE------DKVSDKIVYGGQRDEKQLKIAPTILLDV 394
+P ++ ++ P R+ASL+ + + D Y E+ + PT+L V
Sbjct: 311 DP--GAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERV 368
Query: 395 PDDSTIMKEEIFGPLLPIVTVSIVSSA 421
P +EEIFGP+L ++ + A
Sbjct: 369 PPTMKAYQEEIFGPVLCVLEADTLEEA 395
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 95.0 bits (237), Expect = 3e-21
Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 27/259 (10%)
Query: 169 PLGVVLVISTWNYPFLLSLDPVIG---AIAA--GNAVVLKPSEIAP----ATSSLLAKLL 219
PLGVV VI+ +N+P V G AIA GN VV KPS P A + ++A++L
Sbjct: 132 PLGVVGVITAFNFPV-----AVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVL 186
Query: 220 EDY-VDNSAVRVVEGAVAETSALLE-QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELG 277
E + + +V G AL++ + + +TGS VGR V A A +LELG
Sbjct: 187 EKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAARFGRSLLELG 246
Query: 278 GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
G + +V +L + R ++ + GQ C +I + ++++ L+ K+
Sbjct: 247 GNNAIIVMEDADLDLAVRAVLFAA-VGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQV 305
Query: 338 FGKNPMESKDLSRIVNPFH----FARLASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTIL 391
+P++ L V P H + ++E K +++GG+ D + PTI
Sbjct: 306 RIGDPLDDGTL---VGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTI- 361
Query: 392 LDVPDDSTIMKEEIFGPLL 410
++ D+ I+KEE F P+L
Sbjct: 362 VEGLSDAPIVKEETFAPIL 380
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 91.7 bits (228), Expect = 4e-20
Identities = 91/331 (27%), Positives = 162/331 (48%), Gaps = 17/331 (5%)
Query: 91 RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
R++ ++ +A+++EE+ +E+ I ++ KP + + E++ +LA EL E
Sbjct: 46 RIAILERLADLMEERADELALLIAREGGKPLVDAKV-EVTRAIDGVELAADELGQLGGRE 104
Query: 151 KAKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE 206
LT P+SA I+ EP+GVV+ IS +N+P L + V AIAAG V++KP+
Sbjct: 105 IP-MGLT--PASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPAL 161
Query: 207 IAPATSSLLAKLL-EDYVDNSAVRVV--EGAVAETSALLEQKWDKILYTGSPRVGRIVMA 263
P + LL E + + V E AVAE + + + GS RVG ++ +
Sbjct: 162 ATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVAEKLV-TDPRVAFFSFIGSARVGWMLRS 220
Query: 264 AAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFA 323
A T LE GG +P +VD + +L ++ G + + GQ C+ V + + A
Sbjct: 221 KLAPG-TRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFY-HAGQVCVSVQRVFVPAEIA 278
Query: 324 PKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVYGGQRDE 381
L ++ +P + ++ ++ P R+ ++E + +++ GG+R
Sbjct: 279 DDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLS 338
Query: 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412
APT+LLD P D+ + +EIFGP++ +
Sbjct: 339 DTT-YAPTVLLDPPRDAKVSTQEIFGPVVCV 368
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 91.9 bits (228), Expect = 5e-20
Identities = 73/335 (21%), Positives = 150/335 (44%), Gaps = 31/335 (9%)
Query: 91 RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
R +++ +A+++E E++ ++ K I+E+ + A+ +Y+
Sbjct: 98 RAAKLDRLADLLELHMPELMALCVREAGKT-IHNAIAEV-------REAVDFCRYY---- 145
Query: 151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPA 210
AK E E GV + IS WN+P + + A+AAGN V+ KP+E
Sbjct: 146 -AKQVRDVLG---EFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSL 201
Query: 211 TSSL-LAKLLEDYVDNSAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAK 267
+ + + E ++++ G A+ A L + + + +TGS V +++ A+
Sbjct: 202 IAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQ 261
Query: 268 HL---TPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAP 324
P+I E GG++ +VDST + R ++ + + GQ C + + +D A
Sbjct: 262 REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAF-DSAGQRCSALRVLCVQEDVAD 320
Query: 325 KLIDSLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD--- 380
+++ ++ ++E P + D+ +++ L + ++ + K + D
Sbjct: 321 RVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSR 380
Query: 381 --EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413
+ +APT L ++ DD + EE+FGP+L +V
Sbjct: 381 ACQHGTFVAPT-LFEL-DDIAELSEEVFGPVLHVV 413
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 6e-18
Identities = 90/362 (24%), Positives = 152/362 (41%), Gaps = 46/362 (12%)
Query: 84 KTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL 143
+T ++ R + A+++E + +++ + ++ K ++ K+ K
Sbjct: 40 RTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKT--------LASAKAEALKCAKGF 91
Query: 144 KYWTKPEKAKTSLTTYPSSAEIIS--------EPLGVVLVISTWNYPFLLSLDPVIGAIA 195
+Y+ E A+ L P+ A + +PLGVVL + WN+P + A+
Sbjct: 92 RYYA--EHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALM 149
Query: 196 AGNAVVLKPSEIAPATSSLLAKLLE--DYVDNSAVRVVEGAVAETSALLEQKWDKILYTG 253
AGN +LK + P T+ LA L + D ++ G+ A + L + + TG
Sbjct: 150 AGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTG 209
Query: 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVV------DSTINLQVTTRRIIAGKWMANNG 307
S GR V A A + +LELGG P +V D VT R + NNG
Sbjct: 210 SEPAGRAVAAIAGDEIKKTVLELGGSDPFIVMPSADLDRAAETAVTAR-------VQNNG 262
Query: 308 QACIGVDYIITTKD----FAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLAS 362
Q+CI I D FA K + + L+ G +P D+ + +
Sbjct: 263 QSCIAAKRFIVHADVYDAFAEKFVARMA-ALR--VG-DPTDPDTDVGPLATEQGRDEVEK 318
Query: 363 LLDEDKVSD--KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVS 419
+D D V+ I+ GG+R D PT++ D+ D + EE+FGP+ + V+ +
Sbjct: 319 QVD-DAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADID 377
Query: 420 SA 421
A
Sbjct: 378 EA 379
|
Length = 457 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 3e-17
Identities = 87/351 (24%), Positives = 146/351 (41%), Gaps = 39/351 (11%)
Query: 86 KSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY 145
S+E R + ++ A ++EE +EE+ E I ++ KP +E +M K+A+ Y
Sbjct: 56 LSFEERQAIVERFAALLEENKEELAEVIARETGKPLWEAATEVTAMIN---KIAISIQAY 112
Query: 146 WTKPEKAKTSLTTYPSSAEIIS-EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKP 204
E+ + A ++ P GVV V +N+P L ++ A+ AGN VV KP
Sbjct: 113 ---HERTGEKRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKP 169
Query: 205 SEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVM 262
SE+ P + L KL + + + +V+G AL D +L+TGS G ++
Sbjct: 170 SELTPWVAELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLH 229
Query: 263 AAAAKHLTPVI-LELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
A ++ LE+GG +P V+D ++ II +++ GQ C ++ +
Sbjct: 230 RQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFIS-AGQRCTCARRLLVPQG 288
Query: 322 FAPKLIDSLRNELKE----------------FFGKNPMESKDLSRIVNPFHFARLASLLD 365
D+ L F G + S+ ++ A A LL
Sbjct: 289 ---AQGDAFLARLVAVAKRLTVGRWDAEPQPFMG--AVISEQAAQ----GLVAAQAQLLA 339
Query: 366 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
S ++ Q + P I +DV + + EE FGPLL +V
Sbjct: 340 LGGKS--LLEMTQLQAGTGLLTPGI-IDVTGVAELPDEEYFGPLLQVVRYD 387
|
Length = 487 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 82.6 bits (205), Expect = 5e-17
Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 17/258 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNS 226
GV + IS WN+P + + A+AAGN V+ KP+E P ++ +LL + V
Sbjct: 166 HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRD 225
Query: 227 AVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRI---VMAAAAKHLTPVILELGGKSP 281
+++V G E L + D +++TGS ++ +A + P+I E GGK+
Sbjct: 226 VLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNA 285
Query: 282 AVVDSTINLQVTTRRIIAGKWMA--NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
+VDST + + ++ A + GQ C + + ++ A + I+ L+ +
Sbjct: 286 MIVDSTALPEQAVKDVVQS---AFGSAGQRCSALRLLYLQEEIAERFIEMLKGAMASLKV 342
Query: 340 KNPMESK-DLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ--LKIAPTILLDVPD 396
+P + D+ +++ L + + + ++ D+ +AP I+ V
Sbjct: 343 GDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYF-VAPGIIEIVGI 401
Query: 397 DSTIMKEEIFGPLLPIVT 414
+ E+FGP+L ++
Sbjct: 402 FD--LTTEVFGPILHVIR 417
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 81.8 bits (202), Expect = 8e-17
Identities = 90/374 (24%), Positives = 155/374 (41%), Gaps = 52/374 (13%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
D+E A L + + + ++R +++ I + + EE+ + I +++ KP +
Sbjct: 30 DIENALQLAAA---GFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQA 86
Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAE-----IISEPLGVVLVISTW 179
+E++ + + C W E L P+ E I PLG +L I W
Sbjct: 87 R-AEVAKSANLCD--------WYA-EHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPW 136
Query: 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAE-- 237
N+P + + + AGN +LK + + L+A++ +D V A +
Sbjct: 137 NFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGV 196
Query: 238 TSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRI 297
+ + + + + TGS R G + A A L +LELGG P +V + +L++ +
Sbjct: 197 SQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAA 256
Query: 298 IAGKWMANNGQACIGVDYIIT--------TKDF-----APKLIDSLRNELKEFFGKNPME 344
+AG++ N GQ C I T+ F A K+ D E G PM
Sbjct: 257 VAGRYQ-NTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEE--NALG--PMA 311
Query: 345 SKDLSRIVNPFHFARLAS----LLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTI 400
DL ++ A LA LL +K++ Y APT+L +V + T
Sbjct: 312 RFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNY----------YAPTVLANVTPEMTA 361
Query: 401 MKEEIFGPLLPIVT 414
+EE+FGP+ I
Sbjct: 362 FREELFGPVAAITV 375
|
Length = 462 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 6e-16
Identities = 92/347 (26%), Positives = 152/347 (43%), Gaps = 33/347 (9%)
Query: 87 SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYW 146
S E R++ +Q A ++EE++E + I ++ KP +ET SM K+A+ Y
Sbjct: 55 SLEERIAVVQRFAALLEERKEALARVIARETGKPLWETRTEVASMIG---KVAISIKAY- 110
Query: 147 TKPEKAKTSLTTYPSSAEIIS-EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 205
E+ S P ++ P GVV V +N+P L ++ A+ AGN VV KPS
Sbjct: 111 --HERTGESENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPS 168
Query: 206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMA 263
E+ P + KL E + + +V+GA AL D +L+TGS G ++
Sbjct: 169 ELTPWVAEETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHR 228
Query: 264 AAAKHLTPVI-LELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACI----------- 311
A ++ LE+GG +P +VD ++ II +++ GQ C
Sbjct: 229 QFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFIS-AGQRCTCARRLLVPDGA 287
Query: 312 -GVDYIITTKDFAPKL-IDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
G ++ + A +L + + E + F G + S ++ + A A LL
Sbjct: 288 QGDAFLARLVEVAERLTVGAWDAEPQPFMG--AVISLQAAQRL----LAAQAKLLALGGK 341
Query: 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
S ++ Q D + P I +DV + + EE FGPLL ++
Sbjct: 342 S--LLAMRQLDPGAALLTPGI-IDVTGVAELPDEEHFGPLLQVIRYD 385
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 2e-15
Identities = 66/257 (25%), Positives = 127/257 (49%), Gaps = 15/257 (5%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNS 226
PLG V+ IS WN+P + + A+AAGN+V+ KP+E P ++ +LL E V
Sbjct: 235 RPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPG 294
Query: 227 AVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKH---LTPVILELGGKSP 281
++++ G A L + + +++TGS V R++ AK P+I E GG++
Sbjct: 295 VLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNA 354
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
+VDS+ + ++A + + GQ C + + +D A +++ L+ + E N
Sbjct: 355 MIVDSSALAEQVVADVLASAF-DSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGN 413
Query: 342 PME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLK---IAPTIL-LDVPD 396
P + D+ +++ A + + + ++V+ K +APT++ L+ D
Sbjct: 414 PDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLD 473
Query: 397 DSTIMKEEIFGPLLPIV 413
+ ++ E+FGP+L +V
Sbjct: 474 E---LQREVFGPVLHVV 487
|
Length = 769 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 77.5 bits (190), Expect = 3e-15
Identities = 77/258 (29%), Positives = 122/258 (47%), Gaps = 19/258 (7%)
Query: 166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL-LEDYVD 224
I EPLGV I +N+P ++ L A+ GN +LKPSE P S +LA+L +E +
Sbjct: 246 IREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLP 305
Query: 225 NSAVRVVEGAVAETSALL-EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283
+ + +V G +A+ ++ + + GS G + A AA + +G K+ +
Sbjct: 306 DGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGL 365
Query: 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYII---TTKDFAPKLIDSLRNELKEFFGK 340
V N+ T ++A + A GQ C+ + ++ K + KL++ + LK G
Sbjct: 366 VLPDANIDATLNALLAAGFGA-AGQRCMALSTVVFVGDAKSWEDKLVERAK-ALKVTCGS 423
Query: 341 NPMESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRD------EKQLKIAPTILL 392
P DL +++ R+ L+ + V D K++ G RD EK I PTIL
Sbjct: 424 EP--DADLGPVISKQAKERICRLI-QSGVDDGAKLLLDG-RDIVVPGYEKGNFIGPTILS 479
Query: 393 DVPDDSTIMKEEIFGPLL 410
V D KEEIFGP+L
Sbjct: 480 GVTPDMECYKEEIFGPVL 497
|
Length = 604 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 76.5 bits (188), Expect = 5e-15
Identities = 61/267 (22%), Positives = 99/267 (37%), Gaps = 20/267 (7%)
Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED--YVDNS 226
P G VLVI +N+P + L + GA+A GN V++KP ++ +LL +
Sbjct: 100 PYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPE 159
Query: 227 AVRVVEGAVAETSALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285
V ++ G ALL +L+TGS RV + A + LEL G + V+
Sbjct: 160 DVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDA--KQARIYLELAGFNWKVLG 217
Query: 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFA-PKLIDSLRNELKEFFGKNPME 344
A +GQ C + ++++ L++ +LK + +E
Sbjct: 218 PDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVE----KLKALLARRKLE 273
Query: 345 SKDLSRIVNPFHFARLASLLDEDKV----SDKIVYGGQRDEKQLKIAPTILLDVPDDSTI 400
L + A +A + + S K + + L VP D +
Sbjct: 274 DLLLGPVQTFTTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALF-VPIDEIL 332
Query: 401 MK-----EEIFGPLLPIVTVSIVSSAH 422
EEIFGP +V A
Sbjct: 333 KTYELVTEEIFGPFAIVVEYKKDQLAL 359
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 73.3 bits (180), Expect = 5e-14
Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 17/271 (6%)
Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKP-SEIAPATSSLLAKLLEDYVDNSA 227
PLGVVL I +NYP L++ + A+ AGNAVVLKP ++ A A ++
Sbjct: 158 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGL 217
Query: 228 VRVVEGAVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAVV 284
+ V G +E L + I +TG G +A + K + P+ +ELGGK +V
Sbjct: 218 ISCVTGKGSEIGDFLTMHPGVNCISFTG----GDTGIAISKKAGMVPLQMELGGKDACIV 273
Query: 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME 344
+L + II G + + +GQ C V ++ + A L++ + ++ + P +
Sbjct: 274 LEDADLDLAAANIIKGGF-SYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPED 332
Query: 345 SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEE 404
D++ +V+ + L+ + K + E L I P +L +V D I EE
Sbjct: 333 DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNL-IWPLLLDNVRPDMRIAWEE 391
Query: 405 IFGPLLPIVTVSIVSSA-------HFKLKAC 428
FGP+LP++ ++ V +F L+ C
Sbjct: 392 PFGPVLPVIRINSVEEGIHHCNASNFGLQGC 422
|
Length = 496 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 74.1 bits (183), Expect = 5e-14
Identities = 75/268 (27%), Positives = 130/268 (48%), Gaps = 33/268 (12%)
Query: 167 SEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDN 225
+PLG V+ IS WN+P + + A+ AGN V+ KP+E P ++ +LL + V
Sbjct: 674 HKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPK 733
Query: 226 SAVRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHL---TPVILELGGKS 280
A++++ G A L + + +++TGS V R++ AK P+I E GG++
Sbjct: 734 DALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQN 793
Query: 281 PAVVDSTINL--QVTTRRIIAGKWMA--NNGQAC--IGVDYIITTKDFAPKLIDSLRNEL 334
+VDS+ L QV +IA A + GQ C + V + +D A +++ L+ +
Sbjct: 794 AMIVDSSA-LPEQV-VADVIAS---AFDSAGQRCSALRVLCL--QEDVADRVLTMLKGAM 846
Query: 335 KEFFGKNPMESKDLSRIVNPFHFAR-LASLLD---EDKVSDKIVYG---GQRDEKQLKIA 387
E +P LS V P A A++ + + ++V+ EK +A
Sbjct: 847 DELRIGDP---WRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVA 903
Query: 388 PTIL-LDVPDDSTIMKEEIFGPLLPIVT 414
PT++ +D D ++ E+FGP+L +V
Sbjct: 904 PTLIEIDSISD---LEREVFGPVLHVVR 928
|
Length = 1208 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 71.9 bits (176), Expect = 1e-13
Identities = 63/284 (22%), Positives = 102/284 (35%), Gaps = 19/284 (6%)
Query: 85 TKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDL---SKPPFETFISEISMTKSSC-KLAL 140
E R I +IAN + + + + + + +I+ + ++S K
Sbjct: 12 VNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNID 71
Query: 141 KELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAV 200
E + L + + P+GV + I P L + + IA N
Sbjct: 72 TERGITASVGHIQDVLLPDNGETYVRAFPIGVTMHILPSTNP-LSGITSALRGIATRNQC 130
Query: 201 VLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQ------KWDKILYTGS 254
+ +P AP T+ LA L + +++ V S L + K D I+ TG
Sbjct: 131 IFRPHPSAPFTNRALALLFQAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGG 190
Query: 255 PRVGRIVMAAAAKH--LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
AA KH PVI G SP VVD T + + + + K+ N AC
Sbjct: 191 RDAVD----AAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFDQN--ACAS 244
Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFH 356
+ D L + + +L K P E+K LS+ P
Sbjct: 245 EQNLYVVDDVLDPLYEEFKLKLVVEGLKVPQETKPLSKETTPSF 288
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 2e-12
Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 19/255 (7%)
Query: 169 PLGVVLVISTWNYP-FLLSLDPVIGAIAAGNAVVLKPSEIAP----ATSSLLAKLLEDYV 223
PLG+V VI+ +N+P +L + I A+ GN VV K + P A + L+A++LE
Sbjct: 154 PLGIVGVITAFNFPCAVLGWNACI-ALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNN 212
Query: 224 DNSAV--RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
A+ GA + + + + +TGS +VG +V +LEL G +
Sbjct: 213 LPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGKCLLELSGNNA 272
Query: 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKN 341
+V ++Q+ R ++ + GQ C ++ + +++ L K+ +
Sbjct: 273 IIVMDDADIQLAVRSVLFAA-VGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGD 331
Query: 342 PMESKDLSRIVNPFHFARLASLLDE-----DKVSDKIVYGGQRDEKQLK-IAPTILLDVP 395
P+E L + P H ++ KI+ GG E + + PTI+ ++
Sbjct: 332 PLEKGTL---LGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EIS 387
Query: 396 DDSTIMKEEIFGPLL 410
D+ ++KEE+FGP+L
Sbjct: 388 PDADVVKEELFGPVL 402
|
Length = 508 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 68.5 bits (168), Expect = 3e-12
Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 44/273 (16%)
Query: 169 PLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNSA 227
PLG V+ IS WN+P + V A+AAGN+V+ KP+E P ++ ++L E V
Sbjct: 768 PLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGV 827
Query: 228 VRVVEGAVAETSALL--EQKWDKILYTGSPRVGRIVMAAAAKHL------TPVILELGGK 279
V+++ G A L + + +++TGS V R++ A L P+I E GG+
Sbjct: 828 VQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQ 887
Query: 280 SPAVVDST-INLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338
+ +VDS+ + QV ++A + + GQ C + + D A + + LR + E
Sbjct: 888 NAMIVDSSALTEQVVA-DVLASAF-DSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECR 945
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLDED------------KVSDKIVYGGQRDEKQLK- 385
NP LS + P ++D + + + V+ R+ +
Sbjct: 946 MGNP---DRLSTDIGP--------VIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQ 994
Query: 386 ----IAPT-ILLDVPDDSTIMKEEIFGPLLPIV 413
+ PT I LD D+ +K E+FGP+L +V
Sbjct: 995 SGTFVPPTLIELDSFDE---LKREVFGPVLHVV 1024
|
Length = 1318 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 66.0 bits (162), Expect = 1e-11
Identities = 68/258 (26%), Positives = 123/258 (47%), Gaps = 17/258 (6%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL-EDYVDNS 226
GV + IS WN+P + L V A+AAGN V+ KP+E P ++ KLL E +
Sbjct: 683 HGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKD 742
Query: 227 AVRVVEGAVAET-SALLEQ-KWDKILYTGSPRVGRIV-MAAAAKH--LTPVILELGGKSP 281
++++ G A +AL + + +TGS RI+ AA+ + P+I E GG++
Sbjct: 743 VLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNA 802
Query: 282 AVVDSTINL-QVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
+VDST QV ++ + + GQ C + + +D A ++I+ L+ + E
Sbjct: 803 MIVDSTALPEQV-VDDVVTSAF-RSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVG 860
Query: 341 NPME-SKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLK---IAPTIL-LDVP 395
+P S D+ +++ A L + ++ K +++ +APT +D
Sbjct: 861 DPRLLSTDVGPVIDAEAKANLDAHIERMKREARLLAQLPLPAGTENGHFVAPTAFEIDSI 920
Query: 396 DDSTIMKEEIFGPLLPIV 413
++ E+FGP+L ++
Sbjct: 921 SQ---LEREVFGPILHVI 935
|
Length = 1038 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 1e-09
Identities = 67/279 (24%), Positives = 102/279 (36%), Gaps = 54/279 (19%)
Query: 169 PLGVVLVISTWNYPFLLSLDPVIG-----AIAAGNAVVLKPSEIAPATSSLLAKLLEDYV 223
PLG V V N+P S V G A+AAG VV+K P TS L+A+ + +
Sbjct: 105 PLGPVAVFGASNFPLAFS---VAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAAL 161
Query: 224 DNSA-----VRVVEGAVAETS-ALLEQKWDK-ILYTGSPRVGRIVMAAAAKHLT--PVIL 274
+ +++G E AL++ K + +TGS R GR + AAA P
Sbjct: 162 RATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYA 221
Query: 275 ELGGKSPAVVDSTINLQVTTRRI-------IAGKWMA----NNGQACI--GVDYIITTKD 321
ELG ++N IA ++ GQ C G+ +
Sbjct: 222 ELG---------SVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPA 272
Query: 322 FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE 381
I +L L M + I + + +L V ++ GG E
Sbjct: 273 GD-AFIAALAEALAA-APAQTMLT---PGIAEAYR-QGVEALAAAPGVR--VLAGGAAAE 324
Query: 382 KQLKIAPTILLDVPDDSTIMK-----EEIFGPLLPIVTV 415
+ APT+ D + + EE+FGP +V
Sbjct: 325 GGNQAAPTLF--KVDAAAFLADPALQEEVFGPASLVVRY 361
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 7e-09
Identities = 64/280 (22%), Positives = 109/280 (38%), Gaps = 49/280 (17%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED-YV 223
II+EP+GVV I+ P + + ++ N+++ P A + A LL V
Sbjct: 91 IIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAV 150
Query: 224 DNSAVRVVEGAVAETSALLEQK------WDKILYTGSPRVGRIVMAAAAKHLTPVILELG 277
A + G + S L Q+ +L TG P V+ AA P I
Sbjct: 151 AAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGA 206
Query: 278 GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
G +P V+D T +++ + I+ K N +I + + ++DS+ +E+
Sbjct: 207 GNTPVVIDETADIKRAVQSIVKSKTFDNG---------VICASEQSVIVVDSVYDEVMRL 257
Query: 338 F---GKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDV 394
F G + +++L + V P +L V+ IV GQ KIA L V
Sbjct: 258 FEGQGAYKLTAEELQQ-VQPV-------ILKNGDVNRDIV--GQ---DAYKIAAAAGLKV 304
Query: 395 PDDSTIM-------------KEEIFGPLLPIVTVSIVSSA 421
P ++ I+ E P+L + + + A
Sbjct: 305 PQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADA 344
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 3e-08
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 21/261 (8%)
Query: 169 PL-GVVLVISTWNYPFLLSLDPVIGAIA-AGNAVVLKPSEIAPATSSLLAKLLEDY-VDN 225
PL G V IS +N F + GA A GN V+ KPS+ A ++ L+ ++LE+ +
Sbjct: 168 PLEGFVYAISPFN--FTAIAGNLAGAPALMGNTVIWKPSDTAMLSNYLVMRILEEAGLPP 225
Query: 226 SAVRVV--EGAVAETSALLEQKWDKILYTGSPRV-----GRIVMAAAAKHLTPVIL-ELG 277
+ V +G + + L + I +TGS ++ H P I+ E G
Sbjct: 226 GVINFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQNLDRYHNFPRIVGETG 285
Query: 278 GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337
GK VV + +++ I G + GQ C + P+ L EL
Sbjct: 286 GKDFHVVHPSADVEHVVSGTIRGAF-EYQGQKCSACSRLYVPHSLWPRFKGRLLAELSRV 344
Query: 338 FGKNPME--SKDLSRIVNPFHFARLASLLDEDKVSD---KIVYGGQRDEKQ-LKIAPTIL 391
+ + +++ FA++ ++ K I+ GG+ D+ + PT++
Sbjct: 345 -KVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGGKYDDSVGYFVEPTVV 403
Query: 392 LDVPDDSTIMKEEIFGPLLPI 412
+MKEEIFGP+L +
Sbjct: 404 ESKDPQEPLMKEEIFGPVLTV 424
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 66/276 (23%), Positives = 106/276 (38%), Gaps = 56/276 (20%)
Query: 169 PL-GVVLVISTWNYPFLLSLDPVIGAIAA---------GNAVVLKPSEIAPATSSLLAKL 218
PL G V +S +N+ AI GN V+ KPS+ A ++ L+ K+
Sbjct: 169 PLEGFVYAVSPFNFT----------AIGGNLAGAPALMGNVVLWKPSDTAVLSNYLVYKI 218
Query: 219 LED-----------YVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAK 267
LE+ D V G S L + +TGS + + +
Sbjct: 219 LEEAGLPPGVINFVPGDGPVV----GDTVLASPHLA----GLHFTGSTPTFKSLWKQIGE 270
Query: 268 HLT-----PVIL-ELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
+L P I+ E GGK+ +V + ++ + G + GQ C +
Sbjct: 271 NLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAF-EYQGQKCSAASRAYVPES 329
Query: 322 FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPF----HFARLASLLDEDKVSD--KIVY 375
P++ + L ELKE +P D S + F R+ +D K +I+
Sbjct: 330 LWPEVKERLLEELKEIKMGDPD---DFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIA 386
Query: 376 GGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLL 410
GG+ D + PT++ +M EEIFGP+L
Sbjct: 387 GGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVL 422
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 2e-07
Identities = 57/241 (23%), Positives = 93/241 (38%), Gaps = 22/241 (9%)
Query: 191 IGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYV------DNSAVRVVEGAVAETSALLE- 243
I +AAGNAVV P A S+ +L+ + DN V V E + T+ L+
Sbjct: 119 ISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIETTNELMAH 178
Query: 244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
+ ++ TG P V + +++ K I G P VVD T +++ R I+ G
Sbjct: 179 PDINLLVVTGGPAVVKAALSSGKK----AIGAGAGNPPVVVDETADIEKAARDIVQGASF 234
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
NN CI +I A LI +++ + + + L ++ A
Sbjct: 235 DNN-LPCIAEKEVIAVDSVADYLIAAMQRN-GAYVLNDEQAEQLLEVVLLTNKGATPNKK 292
Query: 364 L---DEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSS 420
D K+ G + I+++ D + EE P+LP+V V
Sbjct: 293 WVGKDASKILKAA--GIEVPAD----IRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDE 346
Query: 421 A 421
A
Sbjct: 347 A 347
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 7e-06
Identities = 51/265 (19%), Positives = 103/265 (38%), Gaps = 18/265 (6%)
Query: 171 GVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED--YVDNSAV 228
GV + I+ +N+P L+ A AG + KP+ + L + + + + ++
Sbjct: 146 GVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSL 205
Query: 229 RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMA--AAAKHLTPVILELGGKSPAVV-- 284
+++ G+ + L+ + D + +TGS + A + E + A++
Sbjct: 206 QLICGSAGDLLDHLDHR-DVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGE 264
Query: 285 DSTINLQVTTR--RIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNP 342
D+T + + I + GQ C + +I K ++ +L+ L + +P
Sbjct: 265 DATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDP 324
Query: 343 M-ESKDLSRIVNPFH----FARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILL-DVPD 396
E D+ +V+ A +A+LL ++ GG PT+LL + P
Sbjct: 325 REEGVDMGPLVSLEQRADVEAAVAALLAA---GAEVRLGGPGRLDGAFFPPTLLLAEDPW 381
Query: 397 DSTIMKEEIFGPLLPIVTVSIVSSA 421
+ E FGP+ + A
Sbjct: 382 AGAVHATEAFGPVATFFPYGDRAEA 406
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 3e-05
Identities = 70/303 (23%), Positives = 119/303 (39%), Gaps = 42/303 (13%)
Query: 146 WTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS-----TWN-YPFLLSLDPVIGAIAAGNA 199
W KP+ L I+ P G+ LVI TWN YP L + ++A GN
Sbjct: 173 WEKPQGKNDPLKL-KKRFTIV--PRGIALVIGCSTFPTWNTYPGLFA------SLATGNP 223
Query: 200 VVLKPSE--IAPATSSL-LAK--LLEDYVDNSAVRVV----EGAVAETSALLEQKWDKIL 250
V++KP I P ++ +A+ L E D + V + A+ A + I
Sbjct: 224 VLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLA-TDPAVRIID 282
Query: 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQAC 310
+TGS G+ + A + V E G + +++ST + + R +A +GQ C
Sbjct: 283 FTGSNAFGQWLEQNARQAQ--VYTEKAGVNTVIIESTDDYKAMLRN-LAFSLSLYSGQMC 339
Query: 311 IGVDYIITTKDFA---------PKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLA 361
I+ +D ++ L + G + L I +P AR+A
Sbjct: 340 TTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGLLGDPARATAVLGAIQSPDTLARIA 399
Query: 362 SL--LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVS 419
L E ++ + + +++ + D D++ M +E FGP+ +V V
Sbjct: 400 EARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYM-QERFGPIAFVVAVD--D 456
Query: 420 SAH 422
AH
Sbjct: 457 GAH 459
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 3e-05
Identities = 62/250 (24%), Positives = 99/250 (39%), Gaps = 42/250 (16%)
Query: 191 IGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYV------DNSAVRVVEGAVAETSALLE- 243
I +AAGN+VV P A S +LL + + +N V V E + L++
Sbjct: 151 ISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKH 210
Query: 244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
++ TG P V + M + K I G P VVD T +++ R I+ G
Sbjct: 211 PGIALLVVTGGPAVVKAAMKSGKK----AIGAGAGNPPVVVDETADIEKAARDIVKGASF 266
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363
NN CI +I ++DS+ +EL KN + ++ +L +
Sbjct: 267 DNN-LPCIAEKEVI--------VVDSVADELMRLMEKNG------AVLLTAEQAEKLQKV 311
Query: 364 -LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIM-----------KEEIFGPLLP 411
L +K G +D KI ++VP D+ ++ E+ P+LP
Sbjct: 312 VLKNGGTVNKKWVG--KDAA--KILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLP 367
Query: 412 IVTVSIVSSA 421
+V V V A
Sbjct: 368 VVRVKDVDEA 377
|
Length = 465 |
| >gnl|CDD|130164 TIGR01092, P5CS, delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 6e-05
Identities = 63/299 (21%), Positives = 123/299 (41%), Gaps = 37/299 (12%)
Query: 82 SRK--TKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF----ETFISEISMTK-- 133
SR S E R + IA+ +E+ E+EI+ KD++ + ++ +SM+
Sbjct: 299 SRMLQALSSEQRKEILHDIADALEDNEDEILAENKKDVAAAQGAGYAASLVARLSMSPSK 358
Query: 134 -SSCKLALKELKYWTKPEKAKTSLTTYPSSAEI--ISEPLGVVLVISTWNYPFLLSLDPV 190
SS ++L++L P T + + S P+GV+L++ L+ + +
Sbjct: 359 ISSLAISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESRPDALVQIASL 418
Query: 191 IGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSAL-----LEQK 245
AI +GN ++LK + A ++++L K++ + + + + G V + L+
Sbjct: 419 --AIRSGNGLLLKGGKEAARSNAILHKVITEAIPIHVGKKLIGLVTSREEIPDLLKLDDV 476
Query: 246 WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMAN 305
D ++ GS ++ + + PV+ G VD + ++ + R + K +
Sbjct: 477 IDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKSASVDMAKRIVRDAK--CD 531
Query: 306 NGQACIGVDYIITTKDFAP-----KLIDSLRNELKEFFGK---------NPMESKDLSR 350
AC ++ ++ KD LID LR E G N E+K
Sbjct: 532 YPAACNAMETLLVHKDLLRNGLLDDLIDMLRTEGVTIHGGPRFAAYLTFNISETKSFRT 590
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region [Amino acid biosynthesis, Glutamate family]. Length = 715 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 8e-05
Identities = 67/297 (22%), Positives = 97/297 (32%), Gaps = 73/297 (24%)
Query: 169 PLGVVLVIS-----TWN-YPFLLSLDPVIGAIAAGNAVVLKPSEIA-------------- 208
P GV LVI TWN YP L + ++A GN V++KP A
Sbjct: 193 PRGVALVIGCSTFPTWNGYPGLFA------SLATGNPVIVKPHPAAILPLAITVQVAREV 246
Query: 209 -------PATSSLLAKLLED-----YVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPR 256
P +L A E+ VR+++ +TGS
Sbjct: 247 LAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIID------------------FTGSNA 288
Query: 257 VGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYI 316
G + A A + V E G + VVDST +L+ R +A +GQ C I
Sbjct: 289 FGDWLEANARQAQ--VYTEKAGVNTVVVDSTDDLKAMLRN-LAFSLSLYSGQMCTTPQNI 345
Query: 317 ITTKD---------FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARL--ASLLD 365
+D ++ L + + L I +P AR+ A L
Sbjct: 346 YVPRDGIQTDDGRKSFDEVAADLAAAIDGLLADPARAAALLGAIQSPDTLARIAEARQLG 405
Query: 366 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAH 422
E + P +L D EE FGP+ +V S+ H
Sbjct: 406 E-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATD--STDH 459
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
| >gnl|CDD|131570 TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 8e-05
Identities = 48/196 (24%), Positives = 80/196 (40%), Gaps = 18/196 (9%)
Query: 166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDN 225
I+ P+GVV + P ++ + +I A NA+V P A KL+ +
Sbjct: 101 IAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEE 160
Query: 226 SAVRVVEGAVA--------ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILEL 276
+ EGA+ T+ L++ K IL TG + + AA TP I
Sbjct: 161 AGAP--EGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVK----AAYSSGTPAIGVG 214
Query: 277 GGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE 336
G PA ++ T N++ R II K +NG C II + +++ L+ +
Sbjct: 215 PGNGPAYIERTANVKKAVRDIIDSKTF-DNGTICASEQSIIVEECNKDAVVEELKKQGGY 273
Query: 337 FFGKNPMESKDLSRIV 352
F E++ L + +
Sbjct: 274 FLTAE--EAEKLGKFI 287
|
Length = 488 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 40.9 bits (97), Expect = 8e-04
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 31/153 (20%)
Query: 166 ISEPLGVVL-VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVD 224
I+EP+GV+ +I + N P ++ + A+ NA++ P A S AK++ +
Sbjct: 92 IAEPVGVIAALIPSTN-PTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMRE--- 147
Query: 225 NSAVRVVEGA------------VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTP 271
+AV GA + T L++ D IL TG P ++ AA P
Sbjct: 148 -AAVAA--GAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGP----GMVKAAYSSGKP 200
Query: 272 VILELG---GKSPAVVDSTINLQVTTRRIIAGK 301
I G G PA +D T +++ + II K
Sbjct: 201 AI---GVGPGNVPAYIDETADIKRAVKDIILSK 230
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 429 | |||
| KOG2451 | 503 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2450 | 501 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| KOG2456 | 477 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| KOG2454 | 583 | consensus Betaine aldehyde dehydrogenase [Energy p | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| KOG2455 | 561 | consensus Delta-1-pyrroline-5-carboxylate dehydrog | 100.0 | |
| KOG2452 | 881 | consensus Formyltetrahydrofolate dehydrogenase [Nu | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| KOG2453 | 507 | consensus Aldehyde dehydrogenase [Energy productio | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.93 | |
| KOG4165 | 433 | consensus Gamma-glutamyl phosphate reductase [Amin | 99.8 | |
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.79 | |
| KOG2449 | 157 | consensus Methylmalonate semialdehyde dehydrogenas | 98.51 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.4 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 98.39 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.35 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 83.16 |
| >KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-87 Score=610.27 Aligned_cols=395 Identities=23% Similarity=0.329 Sum_probs=374.0
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 014211 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 98 (429)
..+.||+| +|+++.++++|++.|| ++|+.|+ .+++++.+|.+.||++|.+||.+|++++..+|.++|+++
T Consensus 23 ~~~~~igG-kWv~s~~~~tF~V~nP--------a~geii~-~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkw 92 (503)
T KOG2451|consen 23 RAQSYIGG-KWVDSPDNKTFEVDNP--------ANGEIIG-KVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKW 92 (503)
T ss_pred chhccccc-eeeccCCCCeeeccCC--------Cccchhh-cccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 68999999 9999999988888888 9999999 556999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcC
Q 014211 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 178 (429)
.++|.+|.|+|++++++|.|||+.+++ +||..+...++||++++++.++...... .+.....+.+||+||+++|+|
T Consensus 93 y~Li~en~ddLa~iiTlE~GKpL~eA~-gEv~y~a~f~eWyAeEA~RvyGdii~s~---~~~rr~i~ikQPvGV~alItP 168 (503)
T KOG2451|consen 93 YELIMENKDDLATIITLENGKPLGEAK-GEVAYSAAFFEWYAEEARRVYGDIIPSL---NPNRRLIVIKQPVGVVALITP 168 (503)
T ss_pred HHHHHhchHHHHHHHhhhcCCchhhcc-ceeehhHHHHHHHHHHhhhhhccccCCC---CCCceEEEEeccceeEEEecC
Confidence 999999999999999999999999997 8999999999999999999988776332 345677899999999999999
Q ss_pred CchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC----HHHHHHHHhcC-CCEEEEe
Q 014211 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA----VAETSALLEQK-WDKILYT 252 (429)
Q Consensus 179 ~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~----~~~~~~L~~~~-v~~v~ft 252 (429)
||||.+....+..+||++||+||+||++++|+++..++++..++ +|.|++|+|+++ .+.+..|+.+| |..|.||
T Consensus 169 WNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFT 248 (503)
T KOG2451|consen 169 WNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFT 248 (503)
T ss_pred cCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEee
Confidence 99999999999999999999999999999999999999999999 999999999852 36789999997 9999999
Q ss_pred CChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHH
Q 014211 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (429)
Q Consensus 253 Gs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~ 332 (429)
||+.+|+.+..+.+.+.|++.+|+||+.|+||++|||+|.|++.....+| .++||.|.+.+|+|||+++||+|+.+|.+
T Consensus 249 GST~VGKiL~~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KF-r~~GQtCVcaNR~yVh~~iyD~Fv~~l~e 327 (503)
T KOG2451|consen 249 GSTNVGKILMAQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKF-RNSGQTCVCANRVYVHDSIYDKFVSKLAE 327 (503)
T ss_pred ccchHHHHHHHhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhh-ccCCceeEecceeEEehhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhc-CCEEEeCCcc-CCCC-ceEecEEEecCCCCCCccccCcccc
Q 014211 333 ELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-DEKQ-LKIAPTILLDVPDDSTIMKEEIFGP 408 (429)
Q Consensus 333 ~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~vl~gg~~-~~~g-~~~~Ptvl~~~~~~~~~~~~E~fgP 408 (429)
+++++++||.. ++++.||||++...++++.+++||.. |+++++||+. .+.| +|++|||+.+++.+|.+.+||+|||
T Consensus 328 ~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGP 407 (503)
T KOG2451|consen 328 AVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGP 407 (503)
T ss_pred HHHheeccCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccc
Confidence 99999999996 68999999999999999999999975 7899999984 4445 8999999999999999999999999
Q ss_pred ceeeEecCCHHHHHHHHHhh
Q 014211 409 LLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 409 v~~v~~~~~~~eai~l~n~~ 428 (429)
+.+|++|+|.||+|+.+|+|
T Consensus 408 la~v~kFdteeEvi~~ANdt 427 (503)
T KOG2451|consen 408 LASVFKFDTEEEVIEWANDT 427 (503)
T ss_pred cceeeeeCCHHHHHHHhccC
Confidence 99999999999999999986
|
|
| >KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-87 Score=641.36 Aligned_cols=394 Identities=26% Similarity=0.385 Sum_probs=369.8
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQS 97 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~ 97 (429)
.++|||| +|.++.++++|+++|| +||++++ .++.++.+||+.||++|++||+ .|++++..+|.++|++
T Consensus 21 ~~lfin~-e~~~~~s~kt~~~~nP--------~tg~~i~-~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~ 90 (501)
T KOG2450|consen 21 LGLFING-EFVDSVSGKTFPVVNP--------ATGEVIA-KVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRK 90 (501)
T ss_pred hheeecC-eeecccCCceeeeecC--------CCCCeEE-EeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHH
Confidence 5899999 9999999999998888 7777777 5559999999999999999999 6999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEc
Q 014211 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 177 (429)
++++++++++.|+.+++.+.|||+.+++..++..+++.+|||+++.++..+..+ ........|+.++|+|||+.|.
T Consensus 91 ~Adlie~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~----~~~~~~~~yt~~eP~GV~G~I~ 166 (501)
T KOG2450|consen 91 LADLIEQDADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTI----PTDGEFFAYTRREPIGVCGQII 166 (501)
T ss_pred HHHHHHhhhHHHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccC----CCCCceEEEecCCcceeeeEec
Confidence 999999999999999999999999999878999999999999999987633222 1223457899999999999999
Q ss_pred CCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCC
Q 014211 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS 254 (429)
Q Consensus 178 p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs 254 (429)
|||||+....|+++|||++||+||+||++.+|+++..+++++.++ +|+|++|+|+| +...+.+|.+|+ |+.|+||||
T Consensus 167 pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGS 246 (501)
T KOG2450|consen 167 PWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGS 246 (501)
T ss_pred cCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceEEecCC
Confidence 999999999999999999999999999999999999999999999 99999999999 778999999996 999999999
Q ss_pred hHHHHHHHHHHhc-ccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014211 255 PRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 255 ~~~~~~i~~~~~~-~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
+.+|+.|.+.+++ +++|+++|+|||+|.||++|+|++.+++.+.++.| +|+||.|++.+|+|||+++|++|+++++++
T Consensus 247 t~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF-~nqGq~C~a~sR~~Vqe~iydefv~~~v~~ 325 (501)
T KOG2450|consen 247 TPVGKEIMEAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIF-FNQGQCCTAGSRVFVQESIYDEFVEKFVAA 325 (501)
T ss_pred CcchhHHhhhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhh-cccccccccCceeEEechHHHHHHHHHHHH
Confidence 9999999999885 58999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred Hhh-hhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCccccc
Q 014211 334 LKE-FFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 334 ~~~-~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (429)
..+ +++|||. +.+..||.+++.+++|+.+||+.++ +|+++++||.. .+.|+|+.|||+.++.++|.+++||+||||
T Consensus 326 a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPV 405 (501)
T KOG2450|consen 326 AKKKLKVGDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPV 405 (501)
T ss_pred HhcccccCCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCce
Confidence 966 9999996 6899999999999999999999996 47899999976 457999999999999999999999999999
Q ss_pred eeeEecCCHHHHHHHHHhh
Q 014211 410 LPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~~~eai~l~n~~ 428 (429)
+.|++|++.||+|+++|++
T Consensus 406 v~v~~F~t~eE~i~~AN~t 424 (501)
T KOG2450|consen 406 VVVLKFKTEEEVIERANNT 424 (501)
T ss_pred EEEEecCcHHHHHHHhcCC
Confidence 9999999999999999986
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-84 Score=648.99 Aligned_cols=389 Identities=29% Similarity=0.412 Sum_probs=363.1
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA 99 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a 99 (429)
.++|||| +|+++.+ +++++|| +||+.++ .++.++.+|+++|+++|++||+.|+++++.+|.++|++++
T Consensus 1 ~~~~i~g-~~~~~~~--~~~~~nP--------~tg~~i~-~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a 68 (472)
T COG1012 1 YKLLIDG-EWVDGAS--TIEVINP--------ATGEVIA-TVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIA 68 (472)
T ss_pred CCccCCC-eecCCCC--ceeeeCC--------CCCCEEe-eecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Confidence 3689999 9999866 6666666 9999888 6779999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCC
Q 014211 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (429)
Q Consensus 100 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~ 179 (429)
++|++++++|++++++|+|||+.+++ .|+..+++.++|++...+++.+.. .+.. .+...++.++|+|||++|+||
T Consensus 69 ~~l~~~~~ela~~~~~e~Gk~i~ea~-~ei~~~~~~~~~~a~~~~~~~~~~-~~~~---~~~~~~~~~~P~GVv~~I~Pw 143 (472)
T COG1012 69 DLLEARAEELAALITLETGKPISEAR-GEIARAADFIRYYAEEARRLEGET-IPTD---KGSKALVRREPLGVVGAITPW 143 (472)
T ss_pred HHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCc-cCCC---CCcceEEEeecceEEEEECCC
Confidence 99999999999999999999999997 579999999999999999877665 2221 166789999999999999999
Q ss_pred chhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChH
Q 014211 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPR 256 (429)
Q Consensus 180 n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~ 256 (429)
|||++..++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+| +.+.++.|++|+ |+.|.||||+.
T Consensus 144 NfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~ 223 (472)
T COG1012 144 NFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTA 223 (472)
T ss_pred CCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChH
Confidence 9999999999999999999999999999999999999999888 99999999999 556899999997 99999999999
Q ss_pred HHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhh
Q 014211 257 VGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE 336 (429)
Q Consensus 257 ~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~ 336 (429)
+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|+|||+++|++|++++.++ ++
T Consensus 224 ~G~~i~~~Aa~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f-~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~ 301 (472)
T COG1012 224 VGRAIAAAAAANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAF-FNAGQRCTAASRLIVHESVYDEFVERLVAR-AA 301 (472)
T ss_pred HHHHHHHHHhhcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHH-hCCCCCccCCeEEEEehhhHHHHHHHHHHH-Hh
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999 66
Q ss_pred -hhCCC-CCCCCcccccCCHHHHHHHHhHHHhhhc-CCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeE
Q 014211 337 -FFGKN-PMESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413 (429)
Q Consensus 337 -~~~g~-~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~ 413 (429)
+++|| .++++++||++++.+++++.++|+++.. |+.++.||.... |+|++|||+.+++++|++++||+||||++|+
T Consensus 302 ~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~-g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~ 380 (472)
T COG1012 302 SLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG-GYFVEPTILEGVTPDMRIAREEIFGPVLPVI 380 (472)
T ss_pred cCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCCC-CeEECCEEEecCCCCChhhhccccCCceEEE
Confidence 78999 5689999999999999999999999965 668888887444 8999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHhh
Q 014211 414 TVSIVSSAHFKLKAC 428 (429)
Q Consensus 414 ~~~~~~eai~l~n~~ 428 (429)
+|+|.||||+++|++
T Consensus 381 ~~~~~dEAi~lAN~t 395 (472)
T COG1012 381 RFKDEEEAIELANDT 395 (472)
T ss_pred EeCCHHHHHHHHhCC
Confidence 999999999999985
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-84 Score=655.25 Aligned_cols=403 Identities=20% Similarity=0.262 Sum_probs=371.8
Q ss_pred hhhhcccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHH
Q 014211 10 QDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYE 89 (429)
Q Consensus 10 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~ 89 (429)
+.++..++...++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..
T Consensus 104 ~~~~~~~~~~~~~~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~ 173 (604)
T PLN02419 104 QSTQPQMPPRVPNLIGG-SFVESQSSSFIDVINP--------ATQEVVS-KVPLTTNEEFKAAVSAAKQAFPLWRNTPIT 173 (604)
T ss_pred cccCcccccccceeECC-EEecCCCCceEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHhccCCHH
Confidence 44566788889999999 9998876655555555 9999998 677999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeec
Q 014211 90 WRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEP 169 (429)
Q Consensus 90 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 169 (429)
+|.++|++++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++.++.+.+..... ...+...++.++|
T Consensus 174 eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea~-~EV~~~i~~~~~~a~~a~~~~g~~~~~---~~~~~~~~~~reP 249 (604)
T PLN02419 174 TRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSH-GDIFRGLEVVEHACGMATLQMGEYLPN---VSNGVDTYSIREP 249 (604)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCcccc---cCCCccceEEecC
Confidence 999999999999999999999999999999999997 699999999999999998776543211 1124456889999
Q ss_pred ceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CC
Q 014211 170 LGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WD 247 (429)
Q Consensus 170 ~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~ 247 (429)
+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+.+.++.|+.|+ |+
T Consensus 250 ~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~~~Vd 329 (604)
T PLN02419 250 LGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIR 329 (604)
T ss_pred ccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCChHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999999999999999 99999999999777889999986 99
Q ss_pred EEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHH
Q 014211 248 KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLI 327 (429)
Q Consensus 248 ~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~ 327 (429)
.|.||||+.+|+.|.++++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||++ +++|+
T Consensus 330 ~V~FTGSt~vG~~I~~~Aa~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f-~naGQ~C~A~~Rv~V~~~-~d~f~ 407 (604)
T PLN02419 330 AVSFVGSNTAGMHIYARAAAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGF-GAAGQRCMALSTVVFVGD-AKSWE 407 (604)
T ss_pred EEEEeCChHHHHHHHHHHhccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHH-hhCCCCcCCCCEEEEeCc-HHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999 89999
Q ss_pred HHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-----CCCceEecEEEecCCCCCCc
Q 014211 328 DSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTI 400 (429)
Q Consensus 328 ~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~ 400 (429)
++|+++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||... ..|+|++|||+.+++++|.+
T Consensus 408 e~l~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i 487 (604)
T PLN02419 408 DKLVERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMEC 487 (604)
T ss_pred HHHHHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHH
Confidence 9999999999999995 6889999999999999999999986 478999999642 35899999999999999999
Q ss_pred cccCccccceeeEecCCHHHHHHHHHhh
Q 014211 401 MKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 401 ~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++||+||||++|++|+|++|||+++|++
T Consensus 488 ~~eEiFGPVl~V~~~~~~dEAI~laN~s 515 (604)
T PLN02419 488 YKEEIFGPVLVCMQANSFDEAISIINKN 515 (604)
T ss_pred HcCCCcCCEEEEEecCCHHHHHHHHhCC
Confidence 9999999999999999999999999986
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-83 Score=644.24 Aligned_cols=393 Identities=21% Similarity=0.326 Sum_probs=363.1
Q ss_pred ceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 014211 21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN 100 (429)
Q Consensus 21 ~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~ 100 (429)
++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|+++++
T Consensus 12 ~~~i~G-~~~~~~~~~~~~v~nP--------~tg~~v~-~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~ 81 (482)
T PRK11241 12 QALING-EWLDANNGEVIDVTNP--------ANGDKLG-SVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFN 81 (482)
T ss_pred cceECC-EEecCCCCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 589999 9998766655555555 9999998 67799999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCc
Q 014211 101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN 180 (429)
Q Consensus 101 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n 180 (429)
+|++++++|++++++|+|||+.+++ .|+..+++.++|++...++..+.... ....+...++.++|+|||++|+|||
T Consensus 82 ~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~---~~~~~~~~~~~~~P~GVv~~I~PwN 157 (482)
T PRK11241 82 LMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIP---GHQADKRLIVIKQPIGVTAAITPWN 157 (482)
T ss_pred HHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccc---cCCCCceEEEEEeeceEEEEECCCc
Confidence 9999999999999999999999996 69999999999999988765443221 1112344678999999999999999
Q ss_pred hhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHH
Q 014211 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRV 257 (429)
Q Consensus 181 ~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~ 257 (429)
||+...++++++||++||+||+|||+.+|+++.++.+++.++ +|+|++|+++| +.+.+..|++|+ ++.|.||||+++
T Consensus 158 ~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~ 237 (482)
T PRK11241 158 FPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEI 237 (482)
T ss_pred ChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHH
Confidence 999999999999999999999999999999999999999999 99999999998 467789999997 999999999999
Q ss_pred HHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhh
Q 014211 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337 (429)
Q Consensus 258 ~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 337 (429)
|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|++|+++|+++++++
T Consensus 238 G~~i~~~aa~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f-~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l 316 (482)
T PRK11241 238 GRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKL 316 (482)
T ss_pred HHHHHHHHHhcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHH-hcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccceeeEe
Q 014211 338 FGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVT 414 (429)
Q Consensus 338 ~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~ 414 (429)
++|+|. +++++||++++.+++++.++|+++. .|+++++||..+ ..|+|++|||+.+++++|.+++||+||||++|++
T Consensus 317 ~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~ 396 (482)
T PRK11241 317 HIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFR 396 (482)
T ss_pred CCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEE
Confidence 999996 5889999999999999999999986 578999999754 2589999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhh
Q 014211 415 VSIVSSAHFKLKAC 428 (429)
Q Consensus 415 ~~~~~eai~l~n~~ 428 (429)
|+|++|||+++|++
T Consensus 397 ~~~~~eai~~aN~s 410 (482)
T PRK11241 397 FKDEADVIAQANDT 410 (482)
T ss_pred eCCHHHHHHHhhCC
Confidence 99999999999976
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-81 Score=631.16 Aligned_cols=394 Identities=23% Similarity=0.335 Sum_probs=360.6
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA 99 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a 99 (429)
+++|||| +|+.+ ++.++ ...||+||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|++++
T Consensus 2 ~~~~i~g-~~~~~-~~~~~--------~v~~P~tg~~i~-~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a 70 (472)
T TIGR03374 2 HKLLING-ELVSG-EGEKQ--------PVYNPATGEVIL-EIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLA 70 (472)
T ss_pred CCceECC-EEecC-CCCeE--------EeECCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 5789999 99986 44444 445559999999 7779999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCC
Q 014211 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (429)
Q Consensus 100 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~ 179 (429)
++|++++++|++++++|+|||+.++...|+..+++.+++++...+...+.. .. ....+...++.++|+|||++|+||
T Consensus 71 ~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~-~~--~~~~~~~~~~~~~P~GVV~~I~Pw 147 (472)
T TIGR03374 71 DVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLA-AG--EYLEGHTSMIRRDPLGVVASIAPW 147 (472)
T ss_pred HHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-cC--ccCCCceEEEEEecceEEEEECCC
Confidence 999999999999999999999998865699999999999998776544321 11 011244568899999999999999
Q ss_pred chhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHH
Q 014211 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRV 257 (429)
Q Consensus 180 n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~ 257 (429)
|||+...++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+++| +.+.+..|++|+ +|.|.||||+++
T Consensus 148 N~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~ 227 (472)
T TIGR03374 148 NYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIAT 227 (472)
T ss_pred CchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHHhCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHH
Confidence 999999999999999999999999999999999999999998899999999998 567889999996 999999999999
Q ss_pred HHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhh
Q 014211 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337 (429)
Q Consensus 258 ~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 337 (429)
|+.|.+.++++++|+++|+|||||+||++|+|++.|++.+++++| +|+||.|++++|||||++++++|+++|+++++++
T Consensus 228 G~~i~~~aa~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l 306 (472)
T TIGR03374 228 GEHILSHTAPSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGF-YNAGQDCTAACRIYAQRGIYDTLVEKLGAAVATL 306 (472)
T ss_pred HHHHHHHHhhcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hhcCCccccCCEEEEcHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hCCCCC-CCCcccccCCHHHHHHHHhHHHhhhc-C-CEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccceeeE
Q 014211 338 FGKNPM-ESKDLSRIVNPFHFARLASLLDEDKV-S-DKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413 (429)
Q Consensus 338 ~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~-~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~ 413 (429)
++|+|. +++++||+++..+++++.++|+++.. | +++++||..+ ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 307 ~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~ 386 (472)
T TIGR03374 307 KSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSIT 386 (472)
T ss_pred CCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEE
Confidence 999996 68899999999999999999999865 4 5899999764 358999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHhh
Q 014211 414 TVSIVSSAHFKLKAC 428 (429)
Q Consensus 414 ~~~~~~eai~l~n~~ 428 (429)
+|+|.+|||+++|++
T Consensus 387 ~~~~~~eai~~an~~ 401 (472)
T TIGR03374 387 SFDDEEQVVNWANDS 401 (472)
T ss_pred EECCHHHHHHHHhCC
Confidence 999999999999975
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-80 Score=631.46 Aligned_cols=396 Identities=25% Similarity=0.349 Sum_probs=364.1
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHH
Q 014211 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQI 95 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L 95 (429)
+..++|||| +|+.+.++.+|+++|| +||++++ .++.++.+|+++|+++|++||+ .|+.++..+|.++|
T Consensus 19 ~~~~~~I~G-~~~~~~~~~~~~~~~P--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L 88 (501)
T PLN02766 19 KFTKLFING-EFVDAASGKTFETRDP--------RTGEVIA-RIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIM 88 (501)
T ss_pred ccccceECC-EEecCCCCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHH
Confidence 345689999 9999877756666555 8999998 6779999999999999999998 59999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEE
Q 014211 96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLV 175 (429)
Q Consensus 96 ~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~ 175 (429)
++++++|++++++|++++++|+|||+.+++..|+..+++.+++++...+++.+... .. ..+...++.++|+|||++
T Consensus 89 ~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~-~~---~~~~~~~~~~~P~GVV~~ 164 (501)
T PLN02766 89 MKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETL-KM---SRQLQGYTLKEPIGVVGH 164 (501)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcee-cc---CCCceEEEEeccceEEEE
Confidence 99999999999999999999999999998656999999999999998887655321 11 123356788999999999
Q ss_pred EcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEe
Q 014211 176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYT 252 (429)
Q Consensus 176 i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ft 252 (429)
|+|||||+...++++++||++||+||+|||+.+|+++.++.+++.++ +|+|++|+|+| +.+.+..|++|+ ++.|.||
T Consensus 165 I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FT 244 (501)
T PLN02766 165 IIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFT 244 (501)
T ss_pred ECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999 99999999998 567789999997 9999999
Q ss_pred CChHHHHHHHHHHh-cccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHH
Q 014211 253 GSPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR 331 (429)
Q Consensus 253 Gs~~~~~~i~~~~~-~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 331 (429)
||+.+|+.|.+.++ .+++|+++|+|||||+||++|+|++.|++.+++++| +|+||.|+++++||||+++|++|+++|+
T Consensus 245 GS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f-~n~GQ~C~a~~ri~V~~si~d~f~~~l~ 323 (501)
T PLN02766 245 GSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIF-YNKGEICVASSRVYVQEGIYDEFVKKLV 323 (501)
T ss_pred CcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hhcCCCCCCCeEEEEcHHHHHHHHHHHH
Confidence 99999999999998 589999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCcccc
Q 014211 332 NELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGP 408 (429)
Q Consensus 332 ~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 408 (429)
++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||..+ ..|+|++|||+.+++++|++++||+|||
T Consensus 324 ~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGP 403 (501)
T PLN02766 324 EKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGP 403 (501)
T ss_pred HHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCc
Confidence 999999999996 5789999999999999999999985 477999999763 4689999999999999999999999999
Q ss_pred ceeeEecCCHHHHHHHHHhh
Q 014211 409 LLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 409 v~~v~~~~~~~eai~l~n~~ 428 (429)
|++|++|+|.+|||+++|++
T Consensus 404 Vl~v~~~~~~deai~~aN~~ 423 (501)
T PLN02766 404 VMSLMKFKTVEEAIKKANNT 423 (501)
T ss_pred eEEEEEeCCHHHHHHHHhCC
Confidence 99999999999999999975
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-80 Score=626.93 Aligned_cols=398 Identities=21% Similarity=0.328 Sum_probs=362.6
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQS 97 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~ 97 (429)
.++|||| +|+.+.++.+|+++|| +||++++ .++.++.+|+++|+++|++||+ .|+++++.+|.++|++
T Consensus 6 ~~~~I~g-~~~~~~~~~~~~~~nP--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~ 75 (486)
T cd07140 6 HQLFING-EFVDAEGGKTYNTINP--------TDGSVIC-KVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYR 75 (486)
T ss_pred cCceECC-EEecCCCCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHH
Confidence 5799999 9998877655555555 9999888 7779999999999999999998 5999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEc
Q 014211 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 177 (429)
++++|++++++|++++++|+|||+.++...|+..+++.+++++.+.+++.+...............+..++|+|||++|+
T Consensus 76 ~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~ 155 (486)
T cd07140 76 LADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVI 155 (486)
T ss_pred HHHHHHHhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEc
Confidence 99999999999999999999999999865699999999999999887764432211100011223678999999999999
Q ss_pred CCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCC
Q 014211 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS 254 (429)
Q Consensus 178 p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs 254 (429)
|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||
T Consensus 156 PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs 235 (486)
T cd07140 156 PWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGS 235 (486)
T ss_pred CCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECc
Confidence 999999999999999999999999999999999999999999999 99999999998 456789999997 999999999
Q ss_pred hHHHHHHHHHHhc-ccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014211 255 PRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 255 ~~~~~~i~~~~~~-~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
+.+|+.|.+.++. +++|+++|+|||||+||++|+|++.+++.+++++| .++||.|+++++||||+++|++|+++|+++
T Consensus 236 ~~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~-~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~ 314 (486)
T cd07140 236 TPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVF-FNKGENCIAAGRLFVEESIHDEFVRRVVEE 314 (486)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHH-hccCCCCCCCcEEEEcHHHHHHHHHHHHHH
Confidence 9999999999996 89999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCccccce
Q 014211 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLL 410 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~ 410 (429)
++++++|+|. +++++||++++.+++++.++|+++. .|+++++||.. +..|+|++|||+.+++++|.+++||+||||+
T Consensus 315 ~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl 394 (486)
T cd07140 315 VKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIM 394 (486)
T ss_pred HHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeE
Confidence 9999999996 5889999999999999999999986 57899999975 4468999999999999999999999999999
Q ss_pred eeEecC--CHHHHHHHHHhh
Q 014211 411 PIVTVS--IVSSAHFKLKAC 428 (429)
Q Consensus 411 ~v~~~~--~~~eai~l~n~~ 428 (429)
+|++|+ |++|||+++|++
T Consensus 395 ~v~~~~~~~~~eai~~aN~~ 414 (486)
T cd07140 395 IISKFDDGDVDGVLQRANDT 414 (486)
T ss_pred EEEEcCCCCHHHHHHHHhCC
Confidence 999998 699999999986
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-80 Score=628.09 Aligned_cols=406 Identities=24% Similarity=0.344 Sum_probs=370.5
Q ss_pred hhhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCC
Q 014211 8 AFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKS 87 (429)
Q Consensus 8 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~ 87 (429)
++.+.+.--+.+.++|||| +|+.+.++.+++++|| .||++++ .++.++.+|+++|+++|++||+.|+.+|
T Consensus 13 ~~~~~~~~~~~~~~~~i~g-~~~~~~~~~~~~v~~P--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~W~~~~ 82 (498)
T PLN02278 13 ALVKLRNAGLLRTQGLIGG-KWTDAYDGKTFPVYNP--------ATGEVIA-NVPCMGRAETNDAIASAHDAFPSWSKLT 82 (498)
T ss_pred HHHHhhcCCCCcccceECC-EEecCCCCCeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 4455555556778999999 9998766655555555 9999998 6779999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEe
Q 014211 88 YEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIIS 167 (429)
Q Consensus 88 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (429)
..+|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++...+++.+.... ....+...++.+
T Consensus 83 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~Ev~~~i~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~ 158 (498)
T PLN02278 83 ASERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAI-GEVAYGASFLEYFAEEAKRVYGDIIP---SPFPDRRLLVLK 158 (498)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccc---cCCCCceEEEEe
Confidence 99999999999999999999999999999999999996 69999999999999999887543211 111234567889
Q ss_pred ecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC
Q 014211 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK 245 (429)
Q Consensus 168 ~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~ 245 (429)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|++++|+++|+ .+.++.|+.|+
T Consensus 159 ~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~ 238 (498)
T PLN02278 159 QPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASP 238 (498)
T ss_pred ecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999999 999999999984 46789999996
Q ss_pred -CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchH
Q 014211 246 -WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAP 324 (429)
Q Consensus 246 -v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~ 324 (429)
++.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +++||.|+++++||||+++|+
T Consensus 239 ~v~~V~fTGS~~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~ 317 (498)
T PLN02278 239 KVRKITFTGSTAVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKF-RNSGQTCVCANRILVQEGIYD 317 (498)
T ss_pred CcCEEEEECcHHHHHHHHHHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHh-ccCCCCCcCCcEEEEeHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCcc
Q 014211 325 KLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIM 401 (429)
Q Consensus 325 ~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~ 401 (429)
+|+++|+++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||... ..|+|++|||+.+++++|+++
T Consensus 318 ~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~ 397 (498)
T PLN02278 318 KFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIF 397 (498)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhh
Confidence 9999999999999999996 5889999999999999999999985 578999999763 358999999999999999999
Q ss_pred ccCccccceeeEecCCHHHHHHHHHhh
Q 014211 402 KEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 402 ~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+||+||||++|++|+|.+|||+++|++
T Consensus 398 ~~E~FGPVl~v~~~~~~deai~~~N~~ 424 (498)
T PLN02278 398 REEVFGPVAPLTRFKTEEEAIAIANDT 424 (498)
T ss_pred hCCCcCCEEEEEeeCCHHHHHHHHhCC
Confidence 999999999999999999999999975
|
|
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-80 Score=622.46 Aligned_cols=393 Identities=26% Similarity=0.380 Sum_probs=362.8
Q ss_pred ceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 014211 21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN 100 (429)
Q Consensus 21 ~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~ 100 (429)
++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++
T Consensus 2 ~~~i~g-~~~~~~~~~~~~~~nP--------~t~~~i~-~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~ 71 (475)
T cd07117 2 GLFING-EWVKGSSGETIDSYNP--------ANGETLS-EITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIAD 71 (475)
T ss_pred CceECC-EEecCCCCCeEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 579999 9998877756666555 9999988 78899999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCc
Q 014211 101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN 180 (429)
Q Consensus 101 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n 180 (429)
+|++++++|++++++|+|||+.+++..|+..+++.+++++...+...+.... ...+...++.++|+|||++|+|||
T Consensus 72 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVV~~I~PwN 147 (475)
T cd07117 72 IIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANM----IDEDTLSIVLREPIGVVGQIIPWN 147 (475)
T ss_pred HHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc----cCCCceeEEEEeecceEEEECCCc
Confidence 9999999999999999999999997569999999999999887654332211 112345688999999999999999
Q ss_pred hhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHH
Q 014211 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVG 258 (429)
Q Consensus 181 ~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~ 258 (429)
||+...++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+++| +.+.+..|+.|+ +|.|.||||+.+|
T Consensus 148 ~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g 227 (475)
T cd07117 148 FPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDVLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVG 227 (475)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHH
Confidence 99999999999999999999999999999999999999998999999999998 567889999997 9999999999999
Q ss_pred HHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhh
Q 014211 259 RIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338 (429)
Q Consensus 259 ~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 338 (429)
+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||++++++|+++|++++++++
T Consensus 228 ~~i~~~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 306 (475)
T cd07117 228 RDVAIAAAKKLIPATLELGGKSANIIFDDANWDKALEGAQLGIL-FNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVK 306 (475)
T ss_pred HHHHHHHhccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHh-hccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-----CCCceEecEEEecCCCCCCccccCcccccee
Q 014211 339 GKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (429)
Q Consensus 339 ~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~ 411 (429)
+|+|. +++++||++++.+++++.++++++. .|+++++||... ..|+|++|||+.+++++|.+++||+||||++
T Consensus 307 ~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~ 386 (475)
T cd07117 307 VGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVAT 386 (475)
T ss_pred CCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEE
Confidence 99996 5789999999999999999999886 578999998753 2589999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHhh
Q 014211 412 IVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 412 v~~~~~~~eai~l~n~~ 428 (429)
|++|+|.+|||+++|++
T Consensus 387 v~~~~~~~eai~~~n~~ 403 (475)
T cd07117 387 VIKFKTEDEVIDMANDS 403 (475)
T ss_pred EEEECCHHHHHHHHhCC
Confidence 99999999999999986
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-80 Score=624.27 Aligned_cols=397 Identities=23% Similarity=0.302 Sum_probs=361.7
Q ss_pred ceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhh-hcCCCHHHHHHHHHHHH
Q 014211 21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS-RKTKSYEWRMSQIQSIA 99 (429)
Q Consensus 21 ~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~-w~~~~~~~R~~~L~~~a 99 (429)
++|||| +|..+.++.+++++|| +||++++ .++.++.+|+++++++|++||+. |++++..+|.++|++++
T Consensus 1 ~~~i~g-~~~~~~~~~~~~~~~P--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a 70 (477)
T cd07113 1 GHFIDG-RPVAGQSEKRLDITNP--------ATEQVIA-SVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLA 70 (477)
T ss_pred CCeECC-EEecCCCCCeEeeeCC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHH
Confidence 369999 9998866645555555 9999998 66799999999999999999985 99999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCccccccc--CCCCcceEEeecceEEEEEc
Q 014211 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLT--TYPSSAEIISEPLGVVLVIS 177 (429)
Q Consensus 100 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~ 177 (429)
+.|++++++|++++++|+|||+.+++..|+..+++.+++++.+.+.+.+......... ..+...+..++|+|||++|+
T Consensus 71 ~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 150 (477)
T cd07113 71 DLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIV 150 (477)
T ss_pred HHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEc
Confidence 9999999999999999999999998645999999999999988776544332111000 11234678999999999999
Q ss_pred CCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCCh
Q 014211 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 178 p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~ 255 (429)
|||||+...++++++||++||+||+|||+.+|.++.++.+++.++ +|+|+||+++|+...+..|++|+ +|.|.||||+
T Consensus 151 p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~ 230 (477)
T cd07113 151 PWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSV 230 (477)
T ss_pred CCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcH
Confidence 999999999999999999999999999999999999999999999 99999999998555888999997 9999999999
Q ss_pred HHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHh
Q 014211 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (429)
Q Consensus 256 ~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~ 335 (429)
++|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++++
T Consensus 231 ~~G~~i~~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 309 (477)
T cd07113 231 ATGKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGF-LHQGQVCAAPERFYVHRSKFDELVTKLKQALS 309 (477)
T ss_pred HHHHHHHHHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHH-hhCCCCCcCCcEEEECHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccceee
Q 014211 336 EFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (429)
Q Consensus 336 ~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v 412 (429)
++++|+|. +++++||++++.+++++.++|+++. .|+++++||... ..|+|++|||+.+++++|.+++||+||||++|
T Consensus 310 ~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v 389 (477)
T cd07113 310 SFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSF 389 (477)
T ss_pred hCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEE
Confidence 99999996 5889999999999999999999985 588999999753 35899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHhh
Q 014211 413 VTVSIVSSAHFKLKAC 428 (429)
Q Consensus 413 ~~~~~~~eai~l~n~~ 428 (429)
++|+|.+|||+++|++
T Consensus 390 ~~~~~~deai~~~n~~ 405 (477)
T cd07113 390 VPYEDEEELIQLINDT 405 (477)
T ss_pred EEeCCHHHHHHHHhCC
Confidence 9999999999999986
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-80 Score=623.76 Aligned_cols=396 Identities=18% Similarity=0.242 Sum_probs=359.2
Q ss_pred ccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHH
Q 014211 15 GAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQ 94 (429)
Q Consensus 15 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~ 94 (429)
...++.++|||| +|+.+ +.++ .+.||+||++++ .++.++.+|+++|+++|++||+.|++++..+|.++
T Consensus 16 ~~~~~~~~~I~G-~~~~~--~~~~--------~~~nP~t~~~i~-~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~ 83 (508)
T PLN02315 16 LSSRNLGCYVGG-EWRAN--GPLV--------SSVNPANNQPIA-EVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEI 83 (508)
T ss_pred cCccccCceECC-EEecC--CCee--------eeECCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 345566899999 99864 4344 445559999888 67799999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEE
Q 014211 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVL 174 (429)
Q Consensus 95 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 174 (429)
|++++++|+++.++|++++++|+|||+.+++ +|+..+++.++|+++.++.+.+..... ...+...+..++|+|||+
T Consensus 84 L~~~a~~l~~~~~~la~~~~~e~GK~~~~a~-~ev~~~i~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~P~GVV~ 159 (508)
T PLN02315 84 VRQIGDALRAKLDYLGRLVSLEMGKILAEGI-GEVQEIIDMCDFAVGLSRQLNGSIIPS---ERPNHMMMEVWNPLGIVG 159 (508)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccC---CCCCceeEEEEecceEEE
Confidence 9999999999999999999999999999996 799999999999999887754432111 112334577899999999
Q ss_pred EEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHH----HHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCE
Q 014211 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL----LAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDK 248 (429)
Q Consensus 175 ~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~----l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~ 248 (429)
+|+|||||+...++++++||++||+||+|||+.+|.++.. +.+++.++ +|+|++|+++|+.+.+..|+.|+ ++.
T Consensus 160 ~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~ 239 (508)
T PLN02315 160 VITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPL 239 (508)
T ss_pred EECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCE
Confidence 9999999999999999999999999999999999999887 67777888 99999999998777889999996 999
Q ss_pred EEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHH
Q 014211 249 ILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLID 328 (429)
Q Consensus 249 v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~ 328 (429)
|.||||+++|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++++|||+++|++|++
T Consensus 240 v~fTGS~~~G~~v~~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~ 318 (508)
T PLN02315 240 VSFTGSSKVGLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAV-GTAGQRCTTCRRLLLHESIYDDVLE 318 (508)
T ss_pred EEEECCHHHHHHHHHHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEeHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCc
Q 014211 329 SLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEI 405 (429)
Q Consensus 329 ~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~ 405 (429)
+|+++++++++|+|. +++++||+++..+.+++.++++++. .|+++++||.. +..|+|++|||+ +++++|.+++||+
T Consensus 319 ~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~eE~ 397 (508)
T PLN02315 319 QLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKEEL 397 (508)
T ss_pred HHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhCCC
Confidence 999999999999996 5789999999999999999999986 47899999975 346899999999 5999999999999
Q ss_pred cccceeeEecCCHHHHHHHHHhh
Q 014211 406 FGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 406 fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
||||++|++|+|.+|||+++|++
T Consensus 398 FGPVl~V~~~~~~deai~~aN~~ 420 (508)
T PLN02315 398 FGPVLYVMKFKTLEEAIEINNSV 420 (508)
T ss_pred cCCEEEEEEeCCHHHHHHHHhCC
Confidence 99999999999999999999975
|
|
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-79 Score=623.32 Aligned_cols=399 Identities=28% Similarity=0.395 Sum_probs=365.9
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHh-----hhhcCCCHHHHH
Q 014211 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNY-----NSRKTKSYEWRM 92 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~-----~~w~~~~~~~R~ 92 (429)
.++++|||| +|+.+.++.+|+++|| +||++++ .++.++.+|+++|+++|++|| +.|+.++..+|.
T Consensus 6 ~~~~~~I~g-~~~~~~~~~~~~v~~P--------~t~~~i~-~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~ 75 (503)
T PLN02467 6 PRRQLFIGG-EWREPVLGKRIPVVNP--------ATEETIG-DIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRA 75 (503)
T ss_pred CccCceECC-EEecCCCCCeEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHH
Confidence 456899999 9999877655555555 8999888 777999999999999999999 889999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceE
Q 014211 93 SQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGV 172 (429)
Q Consensus 93 ~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv 172 (429)
++|++++++|++++++|++++++|+|||+.+++ .|+..+++.++|++...+++.+...........+...++.++|+||
T Consensus 76 ~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 154 (503)
T PLN02467 76 KYLRAIAAKITERKSELAKLETLDCGKPLDEAA-WDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGV 154 (503)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCce
Confidence 999999999999999999999999999999997 6999999999999999888755432111111113356889999999
Q ss_pred EEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEE
Q 014211 173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKI 249 (429)
Q Consensus 173 v~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v 249 (429)
|++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++| +.+.++.|+.|+ ++.|
T Consensus 155 v~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v 234 (503)
T PLN02467 155 VGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVDKI 234 (503)
T ss_pred EEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCCCEE
Confidence 99999999999999999999999999999999999999999999999999 99999999998 567789999997 9999
Q ss_pred EEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHH
Q 014211 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDS 329 (429)
Q Consensus 250 ~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~ 329 (429)
.||||+.+|+.|.+.++.+++|+++|+|||||+||++|||++.|++.+++++| .++||.|+++++||||++++++|+++
T Consensus 235 ~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~ 313 (503)
T PLN02467 235 AFTGSTATGRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCF-WTNGQICSATSRLLVHERIASEFLEK 313 (503)
T ss_pred EEECCHHHHHHHHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHH-hhcCCCCCCCcEEEEcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC---CCCceEecEEEecCCCCCCccccC
Q 014211 330 LRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD---EKQLKIAPTILLDVPDDSTIMKEE 404 (429)
Q Consensus 330 l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~---~~g~~~~Ptvl~~~~~~~~~~~~E 404 (429)
|+++++++++|+|. +++++||++++.+++++.++++++. .|+++++||... ..|+|++|||+.+++++|.+++||
T Consensus 314 l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE 393 (503)
T PLN02467 314 LVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREE 393 (503)
T ss_pred HHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCC
Confidence 99999999999996 5789999999999999999999986 578999999753 258999999999999999999999
Q ss_pred ccccceeeEecCCHHHHHHHHHhh
Q 014211 405 IFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 405 ~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+||||++|++|+|.+|||+++|++
T Consensus 394 ~FgPvl~v~~~~~~~eAi~~aN~~ 417 (503)
T PLN02467 394 VFGPVLCVKTFSTEDEAIELANDS 417 (503)
T ss_pred CCCceEEEEeeCCHHHHHHHHhCC
Confidence 999999999999999999999975
|
|
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-79 Score=625.95 Aligned_cols=395 Identities=23% Similarity=0.339 Sum_probs=362.6
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHHH
Q 014211 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS--RKTKSYEWRMSQIQ 96 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~--w~~~~~~~R~~~L~ 96 (429)
.+++|||| +|+.+.++.+|+++|| .||++++ .++.++.+|+++|+++|++||+. |+.++..+|.++|+
T Consensus 57 ~~~~~I~G-~~~~~~~~~~~~v~~P--------~tg~~i~-~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~ 126 (538)
T PLN02466 57 YTQLLING-QFVDAASGKTFPTLDP--------RTGEVIA-HVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILL 126 (538)
T ss_pred cccceECC-EEecCCCCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHH
Confidence 44689999 9999877766666666 8999998 66799999999999999999984 99999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEE
Q 014211 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 97 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 176 (429)
+++++|++++++|++++++|+|||+.++...|+..+++.++|++.+.++..+.... . ..+...++.++|+|||++|
T Consensus 127 ~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~-~---~~~~~~~~~~~P~GVV~~I 202 (538)
T PLN02466 127 RFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVP-A---DGPHHVQTLHEPIGVAGQI 202 (538)
T ss_pred HHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-c---CCCceEEEEEecceEEEEE
Confidence 99999999999999999999999999986569999999999999887765443211 1 1233468899999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeC
Q 014211 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftG 253 (429)
+|||||+...++++++||++||+||+|||+.+|.++.++++++.++ +|+|+||+|+| +.+.+..|+.|+ +|.|.|||
T Consensus 203 ~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTG 282 (538)
T PLN02466 203 IPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTG 282 (538)
T ss_pred CCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999998 556788999996 99999999
Q ss_pred ChHHHHHHHHHHhc-ccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHH
Q 014211 254 SPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (429)
Q Consensus 254 s~~~~~~i~~~~~~-~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~ 332 (429)
|+++|+.|.+.++. +++|+++|+|||||+||++|+|++.|++.+++++| +++||.|++++++|||+++|++|+++|++
T Consensus 283 S~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~ 361 (538)
T PLN02466 283 STDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALF-FNQGQCCCAGSRTFVHERVYDEFVEKAKA 361 (538)
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHH-hhcCCCcCcCcEEEEcHHHHHHHHHHHHH
Confidence 99999999999984 89999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccc
Q 014211 333 ELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 333 ~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (429)
++.++++|+|. +++++||+++..+++++.++++++. .|+++++||... ..|+|++|||+.+++++|.+++||+||||
T Consensus 362 ~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPV 441 (538)
T PLN02466 362 RALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPV 441 (538)
T ss_pred HHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcE
Confidence 99999999996 5889999999999999999999985 577999999763 35889999999999999999999999999
Q ss_pred eeeEecCCHHHHHHHHHhh
Q 014211 410 LPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~~~eai~l~n~~ 428 (429)
++|++|+|.||||+++|++
T Consensus 442 l~v~~~~d~deAi~~aN~~ 460 (538)
T PLN02466 442 QSILKFKDLDEVIRRANNT 460 (538)
T ss_pred EEEEEeCCHHHHHHHHhCC
Confidence 9999999999999999975
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-79 Score=623.42 Aligned_cols=398 Identities=24% Similarity=0.335 Sum_probs=365.6
Q ss_pred cccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHH
Q 014211 16 AACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQI 95 (429)
Q Consensus 16 ~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L 95 (429)
...+.++|||| +|+.+.++.+++++|| .||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|
T Consensus 3 ~~~~~~~~I~G-~~~~~~~~~~~~~~nP--------~tg~~i~-~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L 72 (488)
T PRK13252 3 RQPLQSLYIDG-AYVEATSGETFEVINP--------ATGEVLA-TVQAATPADVEAAVASAKQGQKIWAAMTAMERSRIL 72 (488)
T ss_pred cCccccccCCC-EEecCCCCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 34567899999 9998877756666665 9999998 677999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEE
Q 014211 96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLV 175 (429)
Q Consensus 96 ~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~ 175 (429)
++++++|++++++|++++++|+|||..+++..|+..+++.++++++..+...+... .. ..+...+..++|+|||++
T Consensus 73 ~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~-~~---~~~~~~~~~~~PlGVv~~ 148 (488)
T PRK13252 73 RRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQI-PL---RGGSFVYTRREPLGVCAG 148 (488)
T ss_pred HHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcee-cc---CCCceEEEEEeeeeEEEE
Confidence 99999999999999999999999999999766999999999999998776433221 11 123456789999999999
Q ss_pred EcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeC
Q 014211 176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 176 i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftG 253 (429)
|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+++|+.+.++.|+.|+ +|.|.|||
T Consensus 149 I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTG 228 (488)
T PRK13252 149 IGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTG 228 (488)
T ss_pred ECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcHHHHHHhcCCCCCEEEEEC
Confidence 99999999999999999999999999999999999999999999999 99999999998656888999997 99999999
Q ss_pred ChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014211 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 254 s~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
|+++|+.|.+.++.+++|+++|+|||||+||++|||++.|++.+++++| .++||.|+++++||||+++|++|+++|+++
T Consensus 229 S~~~g~~i~~~aa~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 307 (488)
T PRK13252 229 GVPTGKKVMAAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANF-YSSGQVCTNGTRVFVQKSIKAAFEARLLER 307 (488)
T ss_pred cHHHHHHHHHHHhhcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHH-hhcCCCCCCCeEEEEcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-----CCCceEecEEEecCCCCCCccccCcc
Q 014211 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIF 406 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~f 406 (429)
++++++|+|. +++++||++++.+++++.++++++. .|+++++||... ..|+|++|||+.+++++|++++||+|
T Consensus 308 ~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~F 387 (488)
T PRK13252 308 VERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIF 387 (488)
T ss_pred HHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCC
Confidence 9999999996 5789999999999999999999885 578999999642 25899999999999999999999999
Q ss_pred ccceeeEecCCHHHHHHHHHhh
Q 014211 407 GPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 407 gPv~~v~~~~~~~eai~l~n~~ 428 (429)
|||++|++|+|.+|||+++|++
T Consensus 388 gPvl~v~~~~~~~eai~~~n~~ 409 (488)
T PRK13252 388 GPVMSVLTFDDEDEVIARANDT 409 (488)
T ss_pred CceEEEEeeCCHHHHHHHHhCC
Confidence 9999999999999999999975
|
|
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-79 Score=621.58 Aligned_cols=393 Identities=25% Similarity=0.346 Sum_probs=363.6
Q ss_pred ceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 014211 21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN 100 (429)
Q Consensus 21 ~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~ 100 (429)
++|||| +|+.+.++.+|+++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|+++++
T Consensus 2 ~~~I~g-~~~~~~~~~~~~v~~P--------~t~~~~~-~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~ 71 (480)
T cd07559 2 DNFING-EWVAPSKGEYFDNYNP--------VNGKVLC-EIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIAD 71 (480)
T ss_pred CccCCC-EEecCCCCCeEEeeCC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 589999 9998877766666666 8899888 67799999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCc
Q 014211 101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN 180 (429)
Q Consensus 101 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n 180 (429)
.|++++++|++++++|+||++.++...|+..+++.+++++...+...+.... ...+...++.++|+|||++|+|||
T Consensus 72 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVV~~I~PwN 147 (480)
T cd07559 72 RIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSE----IDEDTLSYHFHEPLGVVGQIIPWN 147 (480)
T ss_pred HHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc----CCCCceeEEEEeccceEEEECCCc
Confidence 9999999999999999999999997569999999999999988764332211 112445688999999999999999
Q ss_pred hhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHH
Q 014211 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVG 258 (429)
Q Consensus 181 ~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~ 258 (429)
||+...++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+++| +.+.++.|++|+ ++.|.||||+++|
T Consensus 148 ~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g 227 (480)
T cd07559 148 FPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVG 227 (480)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHHhCCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999998 567889999996 9999999999999
Q ss_pred HHHHHHHhcccCceeeecCCCCcEEEcCCC-----CHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014211 259 RIVMAAAAKHLTPVILELGGKSPAVVDSTI-----NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 259 ~~i~~~~~~~~~~~~~e~~G~~~~iV~~da-----dl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
+.|.+.++++++|+++|+|||||+||++|+ |++.|++.+++++| +++||.|+++++||||++++++|+++|+++
T Consensus 228 ~~i~~~aa~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 306 (480)
T cd07559 228 RLIMQYAAENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFA-FNQGEVCTCPSRALVQESIYDEFIERAVER 306 (480)
T ss_pred HHHHHHHhccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHH-hhCCCCCCCCeEEEEcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 99999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-----CCCceEecEEEecCCCCCCccccCcc
Q 014211 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIF 406 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~f 406 (429)
++++++|+|+ +++++||++++.+++++.++|+++. .|+++++||... ..|+|++|||+.+++++|.+++||+|
T Consensus 307 ~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~F 386 (480)
T cd07559 307 FEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIF 386 (480)
T ss_pred HHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCc
Confidence 9999999996 5789999999999999999999986 578999999763 35899999999999999999999999
Q ss_pred ccceeeEecCCHHHHHHHHHhh
Q 014211 407 GPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 407 gPv~~v~~~~~~~eai~l~n~~ 428 (429)
|||++|++|+|.+|||+++|++
T Consensus 387 gPvl~v~~~~~~~eai~~~n~~ 408 (480)
T cd07559 387 GPVLAVITFKDEEEAIAIANDT 408 (480)
T ss_pred CceEEEEeeCCHHHHHHHHhCC
Confidence 9999999999999999999986
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-79 Score=621.46 Aligned_cols=413 Identities=24% Similarity=0.372 Sum_probs=379.6
Q ss_pred CCCcchhhhhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHh
Q 014211 1 MRNPSVRAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNY 80 (429)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~ 80 (429)
|.--|.+-|||..-+++-+.++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~i~g-~~~~~~~~~~~~~~nP--------~tg~~i~-~v~~~~~~dv~~av~aA~~a~ 70 (494)
T PRK09847 1 MNFHHLAYWQDKALSLAIENRLFING-EYTAAAENETFETVDP--------VTQAPLA-KIARGKSVDIDRAVSAARGVF 70 (494)
T ss_pred CChhhhhhHhHhhhcCccccCceECC-EEecCCCCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHhc
Confidence 44567888999999999999999999 9998877655555555 9999998 677999999999999999999
Q ss_pred h--hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccC
Q 014211 81 N--SRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTT 158 (429)
Q Consensus 81 ~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 158 (429)
+ .|+.+|..+|+++|++++++|++++++|++++++|+|||+.++...|+..+++.+++++..++++.+..... .
T Consensus 71 ~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~----~ 146 (494)
T PRK09847 71 ERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATT----S 146 (494)
T ss_pred CCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC----C
Confidence 7 599999999999999999999999999999999999999998765699999999999999998876543211 1
Q ss_pred CCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHH
Q 014211 159 YPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVA 236 (429)
Q Consensus 159 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~ 236 (429)
.+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|+||+++| +.+
T Consensus 147 ~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~ 226 (494)
T PRK09847 147 SHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHE 226 (494)
T ss_pred CCceeEEEecceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChh
Confidence 2345688999999999999999999999999999999999999999999999999999999999 99999999998 567
Q ss_pred HHHHHHhcC-CCEEEEeCChHHHHHHHHHHh-cccCceeeecCCCCcEEEcCCC-CHHHHHHHHHHHHHHhcCCCccccc
Q 014211 237 ETSALLEQK-WDKILYTGSPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTI-NLQVTTRRIIAGKWMANNGQACIGV 313 (429)
Q Consensus 237 ~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~-~~~~~~~~e~~G~~~~iV~~da-dl~~aa~~i~~~~~~~~~Gq~C~~~ 313 (429)
.+..|+.|+ +|.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|+ |++.|++.+++++| .|+||.|+++
T Consensus 227 ~~~~L~~~~~vd~v~fTGs~~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~-~~aGQ~C~a~ 305 (494)
T PRK09847 227 AGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIF-YNQGQVCIAG 305 (494)
T ss_pred HHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHH-hcCCCCCCCC
Confidence 789999997 999999999999999999988 5889999999999999999997 99999999999999 9999999999
Q ss_pred cEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCCCCceEecEEEe
Q 014211 314 DYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILL 392 (429)
Q Consensus 314 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~~g~~~~Ptvl~ 392 (429)
++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++...+++++||..+..|.|++|||+.
T Consensus 306 ~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G~i~~gg~~~~~~~~~~Ptvl~ 385 (494)
T PRK09847 306 TRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFV 385 (494)
T ss_pred cEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCeEEECCccCCCCceEeeEEEe
Confidence 999999999999999999999999999996 5789999999999999999999997655999998775568899999999
Q ss_pred cCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 393 DVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 393 ~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++++++++||+||||++|++|+|.+|||+++|++
T Consensus 386 ~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~ 421 (494)
T PRK09847 386 DVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDS 421 (494)
T ss_pred CCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCC
Confidence 999999999999999999999999999999999975
|
|
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-79 Score=621.07 Aligned_cols=396 Identities=25% Similarity=0.368 Sum_probs=363.1
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHH
Q 014211 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS--RKTKSYEWRMSQI 95 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~--w~~~~~~~R~~~L 95 (429)
+++++|||| +|+.+.++.+|+++|| +||++++ .++.++.+|+++++++|++||+. |+.++..+|.++|
T Consensus 2 ~~~~~~i~g-~~~~~~~~~~~~v~~P--------~t~~~i~-~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L 71 (476)
T cd07142 2 KHTKLFING-QFVDAASGKTFPTIDP--------RNGEVIA-HVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRIL 71 (476)
T ss_pred CcccceECC-EEecCCCCCeEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHH
Confidence 467899999 9998767655665555 9999999 66799999999999999999975 9999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEE
Q 014211 96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLV 175 (429)
Q Consensus 96 ~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~ 175 (429)
++++++|++++++|++++++|+|||..+++..|+..+++.+++++.+.++..+.... ...+...++.++|+|||++
T Consensus 72 ~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~----~~~~~~~~~~~~P~GVv~~ 147 (476)
T cd07142 72 LRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLP----ADGPHHVYTLHEPIGVVGQ 147 (476)
T ss_pred HHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc----cCCCceEEEEEeceeeEEE
Confidence 999999999999999999999999999986569999999999999887765433211 1122346789999999999
Q ss_pred EcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEe
Q 014211 176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYT 252 (429)
Q Consensus 176 i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ft 252 (429)
|+|||||+...++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||
T Consensus 148 I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fT 227 (476)
T cd07142 148 IIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFT 227 (476)
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999 99999999998 455788999996 9999999
Q ss_pred CChHHHHHHHHHHhc-ccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHH
Q 014211 253 GSPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR 331 (429)
Q Consensus 253 Gs~~~~~~i~~~~~~-~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 331 (429)
||+++|+.|.+.+++ +++|+++|+|||||+||++|||++.|++.+++++| +++||.|+++++||||+++|++|+++|+
T Consensus 228 Gs~~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f-~~aGQ~C~a~~rv~V~~~i~d~f~~~l~ 306 (476)
T cd07142 228 GSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALF-FNQGQCCCAGSRTFVHESIYDEFVEKAK 306 (476)
T ss_pred CcHHHHHHHHHHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHh-cCCCCCCCCCeeEEEeHHHHHHHHHHHH
Confidence 999999999999996 89999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCcccc
Q 014211 332 NELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGP 408 (429)
Q Consensus 332 ~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 408 (429)
+++.++++|+|. +++++||++++.+++++.++++++. .|+++++||... ..|+|++|||+.+++++|.+++||+|||
T Consensus 307 ~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgP 386 (476)
T cd07142 307 ARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGP 386 (476)
T ss_pred HHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCc
Confidence 999999999996 5789999999999999999999886 477999999763 4689999999999999999999999999
Q ss_pred ceeeEecCCHHHHHHHHHhh
Q 014211 409 LLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 409 v~~v~~~~~~~eai~l~n~~ 428 (429)
|++|++|+|++|||+++|++
T Consensus 387 vl~v~~~~~~~eai~~~n~~ 406 (476)
T cd07142 387 VQSILKFKTVDEVIKRANNS 406 (476)
T ss_pred eEEEEeeCCHHHHHHHHhCC
Confidence 99999999999999999975
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-79 Score=618.61 Aligned_cols=395 Identities=23% Similarity=0.338 Sum_probs=358.5
Q ss_pred ceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhh-hcCCCHHHHHHHHHHHH
Q 014211 21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS-RKTKSYEWRMSQIQSIA 99 (429)
Q Consensus 21 ~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~-w~~~~~~~R~~~L~~~a 99 (429)
++|||| +|+. ++.+++++|| .||++++ .++.++.+|+++++++|++||+. |+++|..+|.++|++++
T Consensus 2 ~~~i~g-~~~~--~~~~~~~~~P--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a 69 (481)
T TIGR03216 2 RNFING-AFVE--SGKTFANINP--------VDGRVIA-RVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVA 69 (481)
T ss_pred CceECC-EEec--CCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHH
Confidence 689999 9997 4545555555 9999998 66799999999999999999997 99999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCC
Q 014211 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (429)
Q Consensus 100 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~ 179 (429)
++|+++.++|++++++|+|||..++...|+..+++.+++++...+...+...........+...+..++|+|||++|+||
T Consensus 70 ~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~ 149 (481)
T TIGR03216 70 DEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPW 149 (481)
T ss_pred HHHHHhHHHHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCC
Confidence 99999999999999999999999886569999999999999988764433211100011123467889999999999999
Q ss_pred chhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CH-HHHHHHHhcC-CCEEEEeCCh
Q 014211 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AV-AETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 180 n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~-~~~~~L~~~~-v~~v~ftGs~ 255 (429)
|||+...++++++||++||+||+|||+.+|.++.++.+++.++ +|+|++|+++| +. +.+..|..|+ +|.|.||||+
T Consensus 150 N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~ 229 (481)
T TIGR03216 150 NLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGET 229 (481)
T ss_pred CcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCH
Confidence 9999999999999999999999999999999999999999999 99999999998 44 3678888886 9999999999
Q ss_pred HHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHh
Q 014211 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (429)
Q Consensus 256 ~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~ 335 (429)
.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .++||.|++++++|||++++++|+++|+++++
T Consensus 230 ~~G~~i~~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~ 308 (481)
T TIGR03216 230 RTGSAIMKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAF-LNTGQVCLGTERVYVERPIFDRFVAALKARAE 308 (481)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC------CCCceEecEEEecCCCCCCccccCccc
Q 014211 336 EFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD------EKQLKIAPTILLDVPDDSTIMKEEIFG 407 (429)
Q Consensus 336 ~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fg 407 (429)
++++|+|. +++++||++++.+++++.++|+++. .|+++++||..+ ..|+|++|||+.+++++|.+++||+||
T Consensus 309 ~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~Fg 388 (481)
T TIGR03216 309 SLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFG 388 (481)
T ss_pred hcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCC
Confidence 99999996 5889999999999999999999986 478999999753 358999999999999999999999999
Q ss_pred cceeeEecCCHHHHHHHHHhh
Q 014211 408 PLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 408 Pv~~v~~~~~~~eai~l~n~~ 428 (429)
||++|++|+|.+|||+++|++
T Consensus 389 Pvl~V~~~~~~~eai~~~n~~ 409 (481)
T TIGR03216 389 PCCHIAPFDSEEEVIALANDT 409 (481)
T ss_pred ceEEEEEeCCHHHHHHHHhCC
Confidence 999999999999999999975
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-79 Score=609.32 Aligned_cols=365 Identities=65% Similarity=1.057 Sum_probs=341.3
Q ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHH
Q 014211 63 RFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142 (429)
Q Consensus 63 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~ 142 (429)
-.+..|+++++++|++||++|+.+++.+|.++|++++++|++|+|+|+++++.|+|||..++...|+..+++.++|+++.
T Consensus 6 ~~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~ 85 (484)
T PLN02174 6 MFGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQ 85 (484)
T ss_pred hcCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999998766999999999999999
Q ss_pred HHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh
Q 014211 143 LKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY 222 (429)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a 222 (429)
+++|.++..........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~~ 165 (484)
T PLN02174 86 LKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQY 165 (484)
T ss_pred HHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHh
Confidence 99988754432222223445789999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHH
Q 014211 223 VDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW 302 (429)
Q Consensus 223 lP~~~v~~v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~ 302 (429)
+|+|+||+++|+.+.+..|+.+++|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|+|++.|++.+++++|
T Consensus 166 lp~gvv~vv~G~~~~~~~l~~~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f 245 (484)
T PLN02174 166 LDSSAVRVVEGAVTETTALLEQKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKW 245 (484)
T ss_pred CCCCEEEEEECChHHHHHHhcccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHh
Confidence 99999999998767778888756999999999999999999999999999999999999999999999999999999998
Q ss_pred Hh-cCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCC
Q 014211 303 MA-NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE 381 (429)
Q Consensus 303 ~~-~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~ 381 (429)
. |+||.|++++|+|||++++++|+++|+++++++++|+|++++++||++++.+++++.++|+++..++++++||..+.
T Consensus 246 -~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~ga~~~~GG~~~~ 324 (484)
T PLN02174 246 -GCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVSDKIVYGGEKDR 324 (484)
T ss_pred -hCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHcCCEEEECCCcCC
Confidence 7 99999999999999999999999999999999999999878899999999999999999999867889999997655
Q ss_pred CCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 382 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
.|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 325 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~ 371 (484)
T PLN02174 325 ENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSR 371 (484)
T ss_pred CCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCC
Confidence 68999999999999999999999999999999999999999999986
|
|
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-78 Score=616.49 Aligned_cols=393 Identities=24% Similarity=0.313 Sum_probs=361.6
Q ss_pred ceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 014211 21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN 100 (429)
Q Consensus 21 ~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~ 100 (429)
++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|+++++
T Consensus 2 ~~~i~g-~~~~~~~~~~~~~~~P--------~t~~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~ 71 (478)
T cd07085 2 KLFING-EWVESKTTEWLDVYNP--------ATGEVIA-RVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQ 71 (478)
T ss_pred CceECC-EEecCCCCCeEEeeCC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 479999 9998866655666555 8999998 67799999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCc
Q 014211 101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN 180 (429)
Q Consensus 101 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n 180 (429)
+|++++++|++++++|+|||+.+++ .|+..+++.+++++...+...+..... ...+...+..++|+|||++|+|||
T Consensus 72 ~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~P~GVv~~I~p~N 147 (478)
T cd07085 72 LLEENLDELARLITLEHGKTLADAR-GDVLRGLEVVEFACSIPHLLKGEYLEN---VARGIDTYSYRQPLGVVAGITPFN 147 (478)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCeeccc---CCCCceeEEEEecceEEEEECCCC
Confidence 9999999999999999999999996 699999999999987665433322111 112445789999999999999999
Q ss_pred hhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHH
Q 014211 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVG 258 (429)
Q Consensus 181 ~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~ 258 (429)
||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|+.+.+..|++|+ ++.|.||||+.+|
T Consensus 148 ~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g 227 (478)
T cd07085 148 FPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVG 227 (478)
T ss_pred hHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHH
Confidence 999999999999999999999999999999999999999999 99999999999777889999997 9999999999999
Q ss_pred HHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhh
Q 014211 259 RIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338 (429)
Q Consensus 259 ~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 338 (429)
+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .++||.|+++++||||++++++|+++|++++++++
T Consensus 228 ~~i~~~aa~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~ 306 (478)
T cd07085 228 EYIYERAAANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAF-GAAGQRCMALSVAVAVGDEADEWIPKLVERAKKLK 306 (478)
T ss_pred HHHHHHHhhcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-----CCCceEecEEEecCCCCCCccccCcccccee
Q 014211 339 GKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (429)
Q Consensus 339 ~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~ 411 (429)
+|+|. +++++||++++.+++++.++|+++. .|+++++||... .+|+|++|||+.+++++|.+++||+||||++
T Consensus 307 ~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~ 386 (478)
T cd07085 307 VGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLS 386 (478)
T ss_pred CCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEE
Confidence 99996 6889999999999999999999985 578999998642 3589999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHhh
Q 014211 412 IVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 412 v~~~~~~~eai~l~n~~ 428 (429)
|++|+|++|||+++|++
T Consensus 387 v~~~~~~deai~~~N~~ 403 (478)
T cd07085 387 IVRVDTLDEAIAIINAN 403 (478)
T ss_pred EEEeCCHHHHHHHHhCC
Confidence 99999999999999975
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-78 Score=614.45 Aligned_cols=395 Identities=24% Similarity=0.339 Sum_probs=362.8
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 014211 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 98 (429)
+.++|||| +|+.+ ++.+++++|| +||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|+++
T Consensus 2 ~~~~~i~g-~~~~~-~~~~~~~~~P--------~t~~~i~-~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~ 70 (475)
T PRK13473 2 QTKLLING-ELVAG-EGEKQPVYNP--------ATGEVLA-EIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKL 70 (475)
T ss_pred CccceECC-EEecC-CCCEEeeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 46789999 99986 5545555555 8999988 777999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcC
Q 014211 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 178 (429)
+++|++++++|++++++|+|||..++...|+..+++.+++++...+.+.+..... ...+...++.++|+|||++|+|
T Consensus 71 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~---~~~~~~~~~~r~P~GVv~~I~p 147 (475)
T PRK13473 71 ADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGE---YLEGHTSMIRRDPVGVVASIAP 147 (475)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc---CCCCceeEEEEecceeEEEEcc
Confidence 9999999999999999999999998865699999999999998877654432211 1123346789999999999999
Q ss_pred CchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChH
Q 014211 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPR 256 (429)
Q Consensus 179 ~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~ 256 (429)
||||+...++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+++| +.+.+..|+.|+ +|.|.||||++
T Consensus 148 ~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~alP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~ 227 (475)
T PRK13473 148 WNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIA 227 (475)
T ss_pred CChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHhCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHH
Confidence 9999999999999999999999999999999999999999999999999999999 677889999997 99999999999
Q ss_pred HHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhh
Q 014211 257 VGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE 336 (429)
Q Consensus 257 ~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~ 336 (429)
+|+.|.+.++.+++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||++++++|+++|++++++
T Consensus 228 ~g~~i~~~aa~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 306 (475)
T PRK13473 228 TGKHVLSAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGY-YNAGQDCTAACRIYAQRGIYDDLVAKLAAAVAT 306 (475)
T ss_pred HHHHHHHHHhhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred hhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhc-C-CEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccceee
Q 014211 337 FFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKV-S-DKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (429)
Q Consensus 337 ~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~-~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v 412 (429)
+++|+|. +++++||++++.+++++.++|+++.. | +++++||..+ ..|+|++|||+.++++++.+++||+||||++|
T Consensus 307 l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v 386 (475)
T PRK13473 307 LKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSV 386 (475)
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEE
Confidence 9999996 58899999999999999999999865 5 7999999864 35899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHhh
Q 014211 413 VTVSIVSSAHFKLKAC 428 (429)
Q Consensus 413 ~~~~~~~eai~l~n~~ 428 (429)
++|+|.+|||+++|++
T Consensus 387 ~~~~~~deai~~~N~~ 402 (475)
T PRK13473 387 TPFDDEDQAVRWANDS 402 (475)
T ss_pred eccCCHHHHHHHHhCC
Confidence 9999999999999975
|
|
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-78 Score=617.45 Aligned_cols=392 Identities=22% Similarity=0.357 Sum_probs=361.6
Q ss_pred ceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 014211 21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN 100 (429)
Q Consensus 21 ~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~ 100 (429)
++|||| +|+.+.++.+|+++|| .||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|+++++
T Consensus 2 ~~~i~g-~~~~~~~~~~~~~~nP--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~ 71 (488)
T TIGR02299 2 GHFIDG-EFVPSESGETFETLSP--------ATNEVLG-SVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIAD 71 (488)
T ss_pred CccCCC-EEecCCCCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 479999 9998866655555555 9999988 66799999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCc
Q 014211 101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN 180 (429)
Q Consensus 101 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n 180 (429)
+|++++++|++++++|+||++.+++ .|+..+++.+++++..++++..+..... .....+..++|+|||++|+|||
T Consensus 72 ~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~I~p~N 146 (488)
T TIGR02299 72 LIEQHADEIAVLECLDCGQPLRQTR-QQVIRAAENFRFFADKCEEAMDGRTYPV----DTHLNYTVRVPVGPVGLITPWN 146 (488)
T ss_pred HHHHhHHHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHhHHHhcCCccccC----CCceEEEEEEecceEEEECCCc
Confidence 9999999999999999999999997 7999999999999998875554332211 1235678899999999999999
Q ss_pred hhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHH
Q 014211 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRV 257 (429)
Q Consensus 181 ~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~ 257 (429)
||+...++++++||++||+||+|||+.+|.++.++.+++.++ +|+|+||+++| +.+.++.|+.|+ +|.|.||||+.+
T Consensus 147 ~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~ 226 (488)
T TIGR02299 147 APFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETAT 226 (488)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHH
Confidence 999999999999999999999999999999999999999999 99999999998 567788899997 999999999999
Q ss_pred HHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhh
Q 014211 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337 (429)
Q Consensus 258 ~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 337 (429)
|+.|.+.++++++|+++|+|||||+||++|+|++.|++.+++++| .++||.|+++++||||+++|++|+++|+++++++
T Consensus 227 G~~i~~~aa~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l 305 (488)
T TIGR02299 227 GSIIMRNGADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIF-SFNGERCTASSRLLVQESIAEDFVEKLVERVRAI 305 (488)
T ss_pred HHHHHHHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC--------CCCceEecEEEecCCCCCCccccCccc
Q 014211 338 FGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD--------EKQLKIAPTILLDVPDDSTIMKEEIFG 407 (429)
Q Consensus 338 ~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~--------~~g~~~~Ptvl~~~~~~~~~~~~E~fg 407 (429)
++|+|. +++++||++++.+++++.++++++. .|+++++||..+ ..|+|++|||+.+++++|.+++||+||
T Consensus 306 ~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~Fg 385 (488)
T TIGR02299 306 RVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFG 385 (488)
T ss_pred CcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcC
Confidence 999996 5789999999999999999999886 477999998653 248899999999999999999999999
Q ss_pred cceeeEecCCHHHHHHHHHhh
Q 014211 408 PLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 408 Pv~~v~~~~~~~eai~l~n~~ 428 (429)
||++|++|+|.+|||+++|++
T Consensus 386 Pvl~v~~~~~~~eai~~~N~~ 406 (488)
T TIGR02299 386 PVLTVIPFKDEEEAIEKANDT 406 (488)
T ss_pred CeEEEEeeCCHHHHHHHHhCC
Confidence 999999999999999999975
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-78 Score=616.77 Aligned_cols=403 Identities=18% Similarity=0.222 Sum_probs=362.2
Q ss_pred hhhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCC-cchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCC
Q 014211 8 AFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSA-TMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTK 86 (429)
Q Consensus 8 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~-tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~ 86 (429)
++.++.. .....++|||| +|+.+ +.+++++ ||+ ||++++ .++.++.+|+++||++|++||+.|+++
T Consensus 22 ~~~~~~~-~~~~~~~~i~G-~~~~~--~~~~~v~--------~P~~tg~~l~-~~~~~~~~~v~~av~~A~~A~~~W~~~ 88 (522)
T cd07123 22 ALAELKS-LTVEIPLVIGG-KEVRT--GNTGKQV--------MPHDHAHVLA-TYHYADAALVEKAIEAALEARKEWARM 88 (522)
T ss_pred HHHHHhh-hccccCeeECC-EEcCC--CCeEEEE--------CCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 4444433 22456799999 99975 3344454 458 499998 777999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHH-hHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceE
Q 014211 87 SYEWRMSQIQSIANMIEE-KEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEI 165 (429)
Q Consensus 87 ~~~~R~~~L~~~a~~l~~-~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (429)
+..+|.++|++++++|++ ++++|++++++|+||++.++...|+..+++.++|++....++.+...... ..+...++
T Consensus 89 ~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~ 165 (522)
T cd07123 89 PFEDRAAIFLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSS---PAGVWNRL 165 (522)
T ss_pred CHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCC---CCCceeEE
Confidence 999999999999999996 89999999999999999998766899999999999998888765443211 12445788
Q ss_pred Eeecc-eEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHH
Q 014211 166 ISEPL-GVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALL 242 (429)
Q Consensus 166 ~~~P~-Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~ 242 (429)
.++|+ |||++|+|||||+....+++++|| +||+||+|||+.+|+++..+++++.++ +|+|+||+++|+ .+.+..|+
T Consensus 166 ~~~P~~GVv~~I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~ 244 (522)
T cd07123 166 EYRPLEGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVL 244 (522)
T ss_pred EEecCCceEEEECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHh
Confidence 99998 999999999999999999999999 699999999999999999999999999 999999999994 45789999
Q ss_pred hcC-CCEEEEeCChHHHHHHHHHHhcccC------ceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccE
Q 014211 243 EQK-WDKILYTGSPRVGRIVMAAAAKHLT------PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDY 315 (429)
Q Consensus 243 ~~~-v~~v~ftGs~~~~~~i~~~~~~~~~------~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~ 315 (429)
.|+ ++.|.||||+++|+.|.+.++++++ |+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 245 ~~~~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f-~~aGQ~C~a~~r 323 (522)
T cd07123 245 ASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAF-EYQGQKCSAASR 323 (522)
T ss_pred cCCCcCEEEEECCHHHHHHHHHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCcE
Confidence 996 9999999999999999999998877 89999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-c-CCEEEeCCccC-CCCceEecEEE
Q 014211 316 IITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-V-SDKIVYGGQRD-EKQLKIAPTIL 391 (429)
Q Consensus 316 v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~-~~~vl~gg~~~-~~g~~~~Ptvl 391 (429)
||||+++|++|+++|+++++++++|+|. +.+++||++++.+++++.++++++. . |+++++||..+ ..|+|++|||+
T Consensus 324 v~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl 403 (522)
T cd07123 324 AYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVI 403 (522)
T ss_pred EEEcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEE
Confidence 9999999999999999999999999996 4789999999999999999999985 4 67999998764 35899999999
Q ss_pred ecCCCCCCccccCccccceeeEecCC--HHHHHHHHHhh
Q 014211 392 LDVPDDSTIMKEEIFGPLLPIVTVSI--VSSAHFKLKAC 428 (429)
Q Consensus 392 ~~~~~~~~~~~~E~fgPv~~v~~~~~--~~eai~l~n~~ 428 (429)
.+++++|.+++||+||||++|++|+| ++|||+++|++
T Consensus 404 ~~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~ 442 (522)
T cd07123 404 ETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTT 442 (522)
T ss_pred eCCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCC
Confidence 99999999999999999999999995 79999999984
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-78 Score=614.27 Aligned_cols=396 Identities=26% Similarity=0.366 Sum_probs=364.1
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHH
Q 014211 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMSQ 94 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~---~w~~~~~~~R~~~ 94 (429)
.++++|||| +|+.+.++.+|+++|| +||++++ .++.++.+|+++++++|++||+ .|+++|..+|.++
T Consensus 5 ~~~~~~I~g-~~~~~~~~~~~~~~~P--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~ 74 (481)
T cd07141 5 KYTKIFINN-EWHDSVSGKTFPTINP--------ATGEKIC-EVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRL 74 (481)
T ss_pred ccccceECC-EEecCCCCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHH
Confidence 456899999 9998877755666555 9999998 6779999999999999999998 6999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEE
Q 014211 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVL 174 (429)
Q Consensus 95 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 174 (429)
|+++++.|+++.++|++++++|+|||..++...|+..+++.+++++...+++.+.... . ..+...+..++|+|||+
T Consensus 75 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~-~---~~~~~~~~~~~P~GVv~ 150 (481)
T cd07141 75 LNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIP-M---DGDFFTYTRHEPVGVCG 150 (481)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-C---CCCceEEEEEeceeEEE
Confidence 9999999999999999999999999997765569999999999999988887653321 1 12234678999999999
Q ss_pred EEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEE
Q 014211 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILY 251 (429)
Q Consensus 175 ~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~f 251 (429)
+|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+| +.+.+..|+.|+ +|.|.|
T Consensus 151 ~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~f 230 (481)
T cd07141 151 QIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAF 230 (481)
T ss_pred EEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999998 556788999996 999999
Q ss_pred eCChHHHHHHHHHHhc-ccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHH
Q 014211 252 TGSPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (429)
Q Consensus 252 tGs~~~~~~i~~~~~~-~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 330 (429)
|||+.+|+.|.+.++. +++|+++|+|||||+||++|||++.|++.+++++| .++||.|+++++||||+++|++|+++|
T Consensus 231 tGs~~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l 309 (481)
T cd07141 231 TGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALF-FNMGQCCCAGSRTFVQESIYDEFVKRS 309 (481)
T ss_pred ECcHHHHHHHHHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCcccCCeEEEEcHHHHHHHHHHH
Confidence 9999999999999886 89999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccc
Q 014211 331 RNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFG 407 (429)
Q Consensus 331 ~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fg 407 (429)
+++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||... ..|+|++|||+.+++++|++++||+||
T Consensus 310 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~Fg 389 (481)
T cd07141 310 VERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFG 389 (481)
T ss_pred HHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccC
Confidence 9999999999996 5799999999999999999999985 577999999863 468999999999999999999999999
Q ss_pred cceeeEecCCHHHHHHHHHhh
Q 014211 408 PLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 408 Pv~~v~~~~~~~eai~l~n~~ 428 (429)
||++|++|+|.+|||+++|++
T Consensus 390 Pvl~v~~~~~~~eai~~~n~~ 410 (481)
T cd07141 390 PVQQIFKFKTIDEVIERANNT 410 (481)
T ss_pred CeEEEEeeCCHHHHHHHHhCC
Confidence 999999999999999999975
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-78 Score=616.54 Aligned_cols=405 Identities=20% Similarity=0.256 Sum_probs=364.7
Q ss_pred hhhhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCCc-chhhhhcccCCCHHHHHHHHHHHHHHhhhhcC
Q 014211 7 RAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKT 85 (429)
Q Consensus 7 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~ 85 (429)
+++.++.+. ....++|||| +|+.+ ++.+++++ ||.| |++++ .++.++.+|+++|+++|++||+.|+.
T Consensus 20 ~~~~~~~~~-~~~~~~~i~G-~~~~~-~~~~~~~~--------nP~t~g~~i~-~~~~~~~~~v~~av~~A~~a~~~W~~ 87 (533)
T TIGR01236 20 AELKELKSH-PIEIPLVIGG-EEVMG-SGERIDQV--------QPHNHQAVLA-KATNATEEDAAKAVEAALDAKKDWSA 87 (533)
T ss_pred HHHHHHhhc-CeeeceeECC-EEecC-CCCEEEEE--------CCCCCCeEEE-EEeCCCHHHHHHHHHHHHHHHHHHhh
Confidence 556666666 4777899999 99986 44344554 4586 78888 67799999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHH-HhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcce
Q 014211 86 KSYEWRMSQIQSIANMIE-EKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAE 164 (429)
Q Consensus 86 ~~~~~R~~~L~~~a~~l~-~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (429)
++..+|.++|++++++|+ +++++|++++++|+||++.+++..++..+++.++|++.+.+++.+..... ...+..++
T Consensus 88 ~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~---~~~~~~~~ 164 (533)
T TIGR01236 88 LPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSE---SAPGEWNR 164 (533)
T ss_pred CCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccC---CCCCceeE
Confidence 999999999999999999 59999999999999999999975349999999999999888775543211 12245678
Q ss_pred EEeecc-eEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHH
Q 014211 165 IISEPL-GVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSAL 241 (429)
Q Consensus 165 ~~~~P~-Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L 241 (429)
+.++|+ |||++|+|||||+....+++++|| +||+||+|||+.+|+++.++.+++.++ +|+|+||+++| +.+.++.|
T Consensus 165 ~~~~P~~GVv~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~L 243 (533)
T TIGR01236 165 TDYRPLEGFVYAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVV 243 (533)
T ss_pred EEEecCCCEEEEEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHH
Confidence 999999 999999999999999999999999 899999999999999999999999999 99999999998 46788999
Q ss_pred HhcC-CCEEEEeCChHHHHHHHHHHhcccCc------eeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccccc
Q 014211 242 LEQK-WDKILYTGSPRVGRIVMAAAAKHLTP------VILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVD 314 (429)
Q Consensus 242 ~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~------~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~ 314 (429)
+.|+ ++.|.||||+++|+.|.+.++++++| +++|+|||||+||++|+|++.|++.+++++| .|+||.|++++
T Consensus 244 v~~p~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f-~~~GQ~C~a~~ 322 (533)
T TIGR01236 244 LADPRLAGIHFTGSTATFKHLWKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAF-EYQGQKCSAAS 322 (533)
T ss_pred hcCCCcCEEEEECCHHHHHHHHHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hhCCCCCcCCe
Confidence 9997 99999999999999999999998874 9999999999999999999999999999999 99999999999
Q ss_pred EEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhc-C--CEEEeCCccC-CCCceEecE
Q 014211 315 YIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKV-S--DKIVYGGQRD-EKQLKIAPT 389 (429)
Q Consensus 315 ~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~--~~vl~gg~~~-~~g~~~~Pt 389 (429)
|||||+++|++|+++|+++++++++|+|. +++++||++++.+++++.++++++.. | +++++||..+ ..|+|++||
T Consensus 323 rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PT 402 (533)
T TIGR01236 323 RLYVPHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPT 402 (533)
T ss_pred eEEEchhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeE
Confidence 99999999999999999999999999996 57899999999999999999999865 3 5999999764 358999999
Q ss_pred EEecCCCCCCccccCccccceeeEecCCH--HHHHHHH-Hhh
Q 014211 390 ILLDVPDDSTIMKEEIFGPLLPIVTVSIV--SSAHFKL-KAC 428 (429)
Q Consensus 390 vl~~~~~~~~~~~~E~fgPv~~v~~~~~~--~eai~l~-n~~ 428 (429)
|+.+++++|++++||+||||++|++|+|. +|||+++ |++
T Consensus 403 vl~~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~ 444 (533)
T TIGR01236 403 VILSKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTS 444 (533)
T ss_pred EEecCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCC
Confidence 99999999999999999999999999994 9999999 543
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-78 Score=613.54 Aligned_cols=391 Identities=24% Similarity=0.321 Sum_probs=357.2
Q ss_pred ceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 014211 21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN 100 (429)
Q Consensus 21 ~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~ 100 (429)
++|||| +|+.+.++.+|+++|| +||+.++ .++.++.+|+++|+++|++||+.|+.+|..+|.++|+++++
T Consensus 2 ~~~i~g-~~~~~~~~~~~~v~nP--------~tg~~i~-~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~ 71 (479)
T cd07116 2 DNFIGG-EWVAPVKGEYFDNITP--------VTGKVFC-EVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIAD 71 (479)
T ss_pred CceECC-EEecCCCCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 589999 9999877756666666 9999888 67799999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCc
Q 014211 101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN 180 (429)
Q Consensus 101 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n 180 (429)
+|++++++|+.+++.|+|||+.++...|+..+++.+++++...+...+... . ...+...++.++|+|||++|+|||
T Consensus 72 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~-~---~~~~~~~~~~~~P~GVv~~I~PwN 147 (479)
T cd07116 72 RMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSIS-E---IDENTVAYHFHEPLGVVGQIIPWN 147 (479)
T ss_pred HHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeee-c---CCCCceEEEEEeccceEEEECCCc
Confidence 999999999999999999999998656999999999999998876433221 1 112335678999999999999999
Q ss_pred hhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHH
Q 014211 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVG 258 (429)
Q Consensus 181 ~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~ 258 (429)
||+...++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+++| +.+.+..|++|+ ++.|.||||+++|
T Consensus 148 ~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~alP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G 227 (479)
T cd07116 148 FPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDLLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTG 227 (479)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHHCCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999999999999998 567889999996 9999999999999
Q ss_pred HHHHHHHhcccCceeeecCCCCcEEEcCC------CCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHH
Q 014211 259 RIVMAAAAKHLTPVILELGGKSPAVVDST------INLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (429)
Q Consensus 259 ~~i~~~~~~~~~~~~~e~~G~~~~iV~~d------adl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~ 332 (429)
+.|.+.++++++|+++|+|||||+||++| +|++.|++.++++ + +++||.|++++|||||+++|++|+++|++
T Consensus 228 ~~i~~~aa~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~-~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~ 305 (479)
T cd07116 228 RLIMQYASENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMF-A-LNQGEVCTCPSRALIQESIYDRFMERALE 305 (479)
T ss_pred HHHHHHHHcCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHH-H-hcCCCCCCCCeEEEEcHHHHHHHHHHHHH
Confidence 99999999999999999999999999987 7999999999985 6 68999999999999999999999999999
Q ss_pred HHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-----CCCceEecEEEecCCCCCCccccCc
Q 014211 333 ELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEI 405 (429)
Q Consensus 333 ~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~ 405 (429)
+++++++|+|. +.+.+||++++.+++++.++|+++. .|+++++||... ..|+|++|||+.+++ +|.+++||+
T Consensus 306 ~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~ 384 (479)
T cd07116 306 RVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEI 384 (479)
T ss_pred HHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCC
Confidence 99999999996 5789999999999999999999986 477999999753 258899999998874 999999999
Q ss_pred cccceeeEecCCHHHHHHHHHhh
Q 014211 406 FGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 406 fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
||||++|++|+|.+|||+++|++
T Consensus 385 FGPVl~v~~~~~~~eai~~aN~~ 407 (479)
T cd07116 385 FGPVLAVTTFKDEEEALEIANDT 407 (479)
T ss_pred cCceEEEEEeCCHHHHHHHHhCC
Confidence 99999999999999999999986
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-78 Score=616.43 Aligned_cols=404 Identities=25% Similarity=0.338 Sum_probs=368.5
Q ss_pred hhhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCC-cchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCC
Q 014211 8 AFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSA-TMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTK 86 (429)
Q Consensus 8 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~-tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~ 86 (429)
+++++++......++|||| +|+.+ +.+ +...||+ ||++++ .++.++.+|+++++++|++||+.|+.+
T Consensus 25 ~~~~~~~~~~~~~~~~i~g-~~~~~--~~~--------~~~~~P~~t~~~i~-~~~~a~~~~v~~av~~A~~A~~~W~~~ 92 (514)
T PRK03137 25 ALKKVEKELGQDYPLIIGG-ERITT--EDK--------IVSINPANKSEVVG-RVSKATKELAEKAMQAALEAFETWKKW 92 (514)
T ss_pred HHHHHHhhcccccceeECC-EEecC--CCe--------eEeECCCCCCceEE-EEeCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 4555565556677899999 99975 333 4445558 699988 677999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEE
Q 014211 87 SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEII 166 (429)
Q Consensus 87 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (429)
+..+|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..++++.++..... ..+..+++.
T Consensus 93 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~ 168 (514)
T PRK03137 93 SPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEAD-ADTAEAIDFLEYYARQMLKLADGKPVES---RPGEHNRYF 168 (514)
T ss_pred CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEE
Confidence 999999999999999999999999999999999999997 6999999999999999988764432211 234567899
Q ss_pred eecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhc
Q 014211 167 SEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQ 244 (429)
Q Consensus 167 ~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~ 244 (429)
++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++ +|+|++|+++| +.+.+..|+.|
T Consensus 169 ~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~ 248 (514)
T PRK03137 169 YIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDH 248 (514)
T ss_pred EecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999 99999999998 45778999999
Q ss_pred C-CCEEEEeCChHHHHHHHHHHhc------ccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEE
Q 014211 245 K-WDKILYTGSPRVGRIVMAAAAK------HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317 (429)
Q Consensus 245 ~-v~~v~ftGs~~~~~~i~~~~~~------~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~ 317 (429)
+ ++.|.||||+.+|+.|.+.++. +++|+++|+|||||+||++|+|++.|++.+++++| .++||.|+++++||
T Consensus 249 ~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~ 327 (514)
T PRK03137 249 PKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAF-GFSGQKCSACSRAI 327 (514)
T ss_pred CCcCEEEEECCcHHHHHHHHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCCCccCeEEE
Confidence 7 9999999999999999999886 68999999999999999999999999999999999 99999999999999
Q ss_pred EeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccC-CCCceEecEEEecCCC
Q 014211 318 TTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD-EKQLKIAPTILLDVPD 396 (429)
Q Consensus 318 V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~ 396 (429)
||+++|++|+++|+++++++++|+|.+..++||++++.+++++.++++++..++++++||..+ ..|+|++|||+.++++
T Consensus 328 V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~Gpli~~~~~~~v~~~v~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~ 407 (514)
T PRK03137 328 VHEDVYDEVLEKVVELTKELTVGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDP 407 (514)
T ss_pred EeHHHHHHHHHHHHHHHHhCCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCceEEeeEEEeCCCC
Confidence 999999999999999999999999975449999999999999999999987778999999764 3589999999999999
Q ss_pred CCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 397 DSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 397 ~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+|++++||+||||++|++|+|.+|||+++|++
T Consensus 408 ~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~ 439 (514)
T PRK03137 408 KARIMQEEIFGPVVAFIKAKDFDHALEIANNT 439 (514)
T ss_pred CCHHHhCCCCCceEEEEecCCHHHHHHHHhCC
Confidence 99999999999999999999999999999975
|
|
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-78 Score=615.87 Aligned_cols=403 Identities=22% Similarity=0.311 Sum_probs=369.2
Q ss_pred hhhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCCc-chhhhhcccCCCHHHHHHHHHHHHHHhhhhcCC
Q 014211 8 AFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTK 86 (429)
Q Consensus 8 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~ 86 (429)
++-++....+...++|||| +|+.+ +.++ ..+||+| |++++ .++.++.+|+++++++|++||+.|+.+
T Consensus 21 ~~~~~~~~~~~~~~~~i~g-~~~~~--~~~~--------~v~~P~t~~~~i~-~~~~a~~~~v~~av~~A~~A~~~W~~~ 88 (512)
T cd07124 21 ALARVREELGREYPLVIGG-KEVRT--EEKI--------ESRNPADPSEVLG-TVQKATKEEAEAAVQAARAAFPTWRRT 88 (512)
T ss_pred HHHHHHhhcccccceeECC-EEecC--CCeE--------EeECCCCCCceEE-EEeCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 3344555667788999999 99974 3334 4455597 99888 677999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEE
Q 014211 87 SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEII 166 (429)
Q Consensus 87 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (429)
+..+|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.+++++..++++.+... .. ..+...++.
T Consensus 89 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~i~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~ 163 (512)
T cd07124 89 PPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEAD-ADVAEAIDFLEYYAREMLRLRGFPV-EM---VPGEDNRYV 163 (512)
T ss_pred CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-cC---CCCceeEEE
Confidence 999999999999999999999999999999999999997 5999999999999999988733221 11 124567899
Q ss_pred eecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhc
Q 014211 167 SEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQ 244 (429)
Q Consensus 167 ~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~ 244 (429)
++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++ +|+|++|+++| +.+.+..|+.|
T Consensus 164 ~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~ 243 (512)
T cd07124 164 YRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEH 243 (512)
T ss_pred EecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999 99999999998 55678999999
Q ss_pred C-CCEEEEeCChHHHHHHHHHHhc------ccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEE
Q 014211 245 K-WDKILYTGSPRVGRIVMAAAAK------HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317 (429)
Q Consensus 245 ~-v~~v~ftGs~~~~~~i~~~~~~------~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~ 317 (429)
+ +|.|.||||+.+|+.|.+.++. +++|+++|+|||||+||++|+|++.|++.+++++| .++||.|+++++||
T Consensus 244 ~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~ 322 (512)
T cd07124 244 PDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAF-GFQGQKCSACSRVI 322 (512)
T ss_pred CCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hhCCCccccceEEE
Confidence 7 9999999999999999999886 68999999999999999999999999999999999 99999999999999
Q ss_pred EeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCC---CCceEecEEEec
Q 014211 318 TTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE---KQLKIAPTILLD 393 (429)
Q Consensus 318 V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~---~g~~~~Ptvl~~ 393 (429)
||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+++..++++++||..+. .|+|++|||+.+
T Consensus 323 V~~~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~g~~vl~gG~~~~~~~~g~~~~Ptvl~~ 402 (512)
T cd07124 323 VHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEVLELAAEGYFVQPTIFAD 402 (512)
T ss_pred EcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEecCccCCCCCCCceEcCEEEec
Confidence 99999999999999999999999996 47899999999999999999999877889999997654 589999999999
Q ss_pred CCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 394 VPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 394 ~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 403 v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~ 437 (512)
T cd07124 403 VPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDT 437 (512)
T ss_pred CCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCC
Confidence 99999999999999999999999999999999975
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-78 Score=615.33 Aligned_cols=401 Identities=20% Similarity=0.331 Sum_probs=364.9
Q ss_pred hhhcccccccceeeecceeeccCCccccccccCCceEeeeCC-cchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHH
Q 014211 11 DFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSA-TMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYE 89 (429)
Q Consensus 11 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~-tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~ 89 (429)
.++.....+.++|||| +|+.+ +.+ +...||+ ||++++ .++.++.+|+++|+++|++||+.|+.+|..
T Consensus 24 ~~~~~~~~~~~~~i~g-~~~~~--~~~--------~~~~~P~~~~~~i~-~~~~~~~~~v~~av~~A~~A~~~W~~~~~~ 91 (511)
T TIGR01237 24 RVKEQLGKTYPLYING-EYVET--ENK--------IDSINPCDPSEVVG-KVGKASVEQAEHALQIAKKAFEAWKKTPVR 91 (511)
T ss_pred HHHHhhccccceeECC-EEecC--CCe--------EEeECCCCCCcEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 3343445666899999 99975 222 4445558 488888 677999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeec
Q 014211 90 WRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEP 169 (429)
Q Consensus 90 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 169 (429)
+|.++|++++++|++++++|++++++|+|||+.+++ .|+..+++.+++++..++++.+.... ....+...++.++|
T Consensus 92 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~P 167 (511)
T TIGR01237 92 ERAGILRKAAAIMERRRHELNALICLEVGKIIPEAD-AEVAEAIDFCEYYAREMERLAGQGVN---LDIEGETNRYFYQP 167 (511)
T ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccc---CCCCCceeEEEEec
Confidence 999999999999999999999999999999999997 69999999999999999887653321 11234567889999
Q ss_pred ceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-C
Q 014211 170 LGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-W 246 (429)
Q Consensus 170 ~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v 246 (429)
+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+++| +.+.+..|+.|+ +
T Consensus 168 ~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v 247 (511)
T TIGR01237 168 RGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKT 247 (511)
T ss_pred ceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999 99999999998 567889999997 9
Q ss_pred CEEEEeCChHHHHHHHHHHh------cccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeC
Q 014211 247 DKILYTGSPRVGRIVMAAAA------KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320 (429)
Q Consensus 247 ~~v~ftGs~~~~~~i~~~~~------~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~ 320 (429)
+.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++| .++||.|+++++||||+
T Consensus 248 ~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~ 326 (511)
T TIGR01237 248 HLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAF-GFTGQKCSACSRVVVLS 326 (511)
T ss_pred CeEEEECchHHHHHHHHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCcccceEEEEeh
Confidence 99999999999999999887 578999999999999999999999999999999999 99999999999999999
Q ss_pred CchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccC-CCCceEecEEEecCCCCC
Q 014211 321 DFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD-EKQLKIAPTILLDVPDDS 398 (429)
Q Consensus 321 ~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~ 398 (429)
++|++|+++|+++++++++|+|. +++++||++++.+.+++.++++++...+++++||..+ ..|+|++|||+.+++++|
T Consensus 327 ~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~ 406 (511)
T TIGR01237 327 PVYDAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHA 406 (511)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCC
Confidence 99999999999999999999996 5889999999999999999999987666899988653 358999999999999999
Q ss_pred CccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 399 TIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 399 ~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
.+++||+||||++|++|+|.+|||+++|++
T Consensus 407 ~i~~eE~FgPVl~v~~~~~~deai~~~n~~ 436 (511)
T TIGR01237 407 RLAQEEIFGPVVAIIRAADFDEALEIANGT 436 (511)
T ss_pred hHhhCCCcCCeEEEEeeCCHHHHHHHHhCC
Confidence 999999999999999999999999999975
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-78 Score=610.31 Aligned_cols=392 Identities=25% Similarity=0.384 Sum_probs=360.8
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCC-cchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSA-TMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~-tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 98 (429)
+++|||| +|+.+.+. + ...||. ||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|+++
T Consensus 1 ~~~~i~g-~~~~~~~~--~--------~v~~P~~~~~~i~-~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~ 68 (473)
T cd07097 1 YRNYIDG-EWVAGGDG--E--------ENRNPSDTSDVVG-KYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKA 68 (473)
T ss_pred CCceECC-EEecCCCC--c--------eeECCCCCCeEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3689999 99987432 3 445558 599888 777999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcC
Q 014211 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 178 (429)
++.|++++++|++++++|+|||..+++ .|+..+++.+++++...+++.+..... ...+...++.++|+|||++|+|
T Consensus 69 a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~~P~GVv~~I~P 144 (473)
T cd07097 69 GDELEARKEELARLLTREEGKTLPEAR-GEVTRAGQIFRYYAGEALRLSGETLPS---TRPGVEVETTREPLGVVGLITP 144 (473)
T ss_pred HHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccc---CCCCceEEEEEEeeeeEEEEcc
Confidence 999999999999999999999999997 599999999999999888765543211 1124456899999999999999
Q ss_pred CchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCCh
Q 014211 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 179 ~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~ 255 (429)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++|+ .+.+..|+.|+ ++.|.||||+
T Consensus 145 ~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~ 224 (473)
T cd07097 145 WNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGST 224 (473)
T ss_pred cChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999999999 999999999984 56889999997 9999999999
Q ss_pred HHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHh
Q 014211 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (429)
Q Consensus 256 ~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~ 335 (429)
.+|+.|.+.++++++|+++|+|||||+||++|+|++.|++.+++++| .|+||.|+++++||||+++|++|+++|+++++
T Consensus 225 ~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 303 (473)
T cd07097 225 AVGRRIAAAAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAF-FSTGQRCTASSRLIVTEGIHDRFVEALVERTK 303 (473)
T ss_pred HHHHHHHHHHhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHH-hccCCCCcCCeeEEEehhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC---CCCceEecEEEecCCCCCCccccCccccce
Q 014211 336 EFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD---EKQLKIAPTILLDVPDDSTIMKEEIFGPLL 410 (429)
Q Consensus 336 ~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~ 410 (429)
++++|+|. +.+++||++++.+++++.++|++++ .|+++++||... ..|+|++|||+.++++++.+++||+||||+
T Consensus 304 ~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl 383 (473)
T cd07097 304 ALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVA 383 (473)
T ss_pred hCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceE
Confidence 99999996 5789999999999999999999986 578999999753 247899999999999999999999999999
Q ss_pred eeEecCCHHHHHHHHHhh
Q 014211 411 PIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 411 ~v~~~~~~~eai~l~n~~ 428 (429)
+|++|+|.+|||+++|++
T Consensus 384 ~v~~~~~~~eai~~~n~~ 401 (473)
T cd07097 384 AVIRVRDYDEALAIANDT 401 (473)
T ss_pred EEeccCCHHHHHHHHhCC
Confidence 999999999999999975
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-78 Score=610.20 Aligned_cols=390 Identities=22% Similarity=0.317 Sum_probs=357.2
Q ss_pred ceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 014211 21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN 100 (429)
Q Consensus 21 ~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~ 100 (429)
.+|||| +|+.+. + .++...||+||++++ .++.++.+|+++++++|++||+.|++++..+|.++|+++++
T Consensus 2 ~~~i~g-~~~~~~-~--------~~~~~~~P~t~~~i~-~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~ 70 (487)
T PRK09457 2 TLWING-DWIAGQ-G--------EAFESRNPVSGEVLW-QGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAA 70 (487)
T ss_pred CceECC-EEecCC-C--------CEEEEECCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 379999 999863 4 335555669999998 67799999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCc
Q 014211 101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN 180 (429)
Q Consensus 101 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n 180 (429)
+|++++++|++++++|+|||+.+++ .|+..+++.+++++..+.++.+.... ...+...++.++|+|||++|+|||
T Consensus 71 ~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN 145 (487)
T PRK09457 71 LLEENKEELAEVIARETGKPLWEAA-TEVTAMINKIAISIQAYHERTGEKRS----EMADGAAVLRHRPHGVVAVFGPYN 145 (487)
T ss_pred HHHhHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceec----cCCCceeEEEEeccEEEEEECCCc
Confidence 9999999999999999999999997 69999999999999888777654321 122445688999999999999999
Q ss_pred hhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHH
Q 014211 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVG 258 (429)
Q Consensus 181 ~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~ 258 (429)
||+...++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+|+|+.+.+..|+.|+ ++.|.||||+++|
T Consensus 146 ~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G 225 (487)
T PRK09457 146 FPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTG 225 (487)
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHH
Confidence 999999999999999999999999999999999999999999 99999999999878889999996 9999999999999
Q ss_pred HHHHHHHhcc-cCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCch-HHHHHHHHHHHhh
Q 014211 259 RIVMAAAAKH-LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFA-PKLIDSLRNELKE 336 (429)
Q Consensus 259 ~~i~~~~~~~-~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~-~~f~~~l~~~~~~ 336 (429)
+.|.+.++.+ .+++++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||+++| ++|+++|++++++
T Consensus 226 ~~i~~~aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~ 304 (487)
T PRK09457 226 YLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAF-ISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKR 304 (487)
T ss_pred HHHHHHHhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHh-hccCCCCCCCceEEEeccccHHHHHHHHHHHHhc
Confidence 9999987755 5788999999999999999999999999999999 99999999999999999998 9999999999999
Q ss_pred hhCCCCC--CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCccccceee
Q 014211 337 FFGKNPM--ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (429)
Q Consensus 337 ~~~g~~~--~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v 412 (429)
+++|+|. +.+++||+++..+++++.++++++. .|+++++||.. +..|+|++|||+ +++++|.+++||+||||++|
T Consensus 305 ~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V 383 (487)
T PRK09457 305 LTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYFGPLLQV 383 (487)
T ss_pred CcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCcCCeEEE
Confidence 9999994 5789999999999999999999986 47899888764 345799999999 78999999999999999999
Q ss_pred EecCCHHHHHHHHHhh
Q 014211 413 VTVSIVSSAHFKLKAC 428 (429)
Q Consensus 413 ~~~~~~~eai~l~n~~ 428 (429)
++|+|.+|||+++|++
T Consensus 384 ~~~~~~deai~~~N~~ 399 (487)
T PRK09457 384 VRYDDFDEAIRLANNT 399 (487)
T ss_pred EEeCCHHHHHHHHhCC
Confidence 9999999999999975
|
|
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-78 Score=608.67 Aligned_cols=395 Identities=24% Similarity=0.331 Sum_probs=361.1
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh-hhc-CCCHHHHHHHHH
Q 014211 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN-SRK-TKSYEWRMSQIQ 96 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~-~w~-~~~~~~R~~~L~ 96 (429)
..++|||| +|+.+.++.+|+++|| +||++++ .++.++.+|+++|+++|++||+ .|+ .+|..+|.++|+
T Consensus 6 ~~~~~I~G-~~~~~~~~~~~~v~~P--------~t~~~i~-~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~ 75 (481)
T cd07143 6 PTGLFING-EFVDSVHGGTVKVYNP--------STGKLIT-KIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLS 75 (481)
T ss_pred ccCceECC-EEecCCCCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHH
Confidence 35899999 9998876655555555 9999888 6779999999999999999998 599 999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEE
Q 014211 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 97 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 176 (429)
++++.|++++++|++++++|+|||..++...|+..+++.+++++.+.++..+.... . ..+...+..++|+|||++|
T Consensus 76 ~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~-~---~~~~~~~~~~~P~GVv~~I 151 (481)
T cd07143 76 KLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIE-T---DIKKLTYTRHEPIGVCGQI 151 (481)
T ss_pred HHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-C---CCCceEEEEEecceeEEEE
Confidence 99999999999999999999999997665569999999999999988765443211 1 1234567899999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeC
Q 014211 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftG 253 (429)
+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|++++|+++| +.+.+..|+.|+ +|.|.|||
T Consensus 152 ~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTG 231 (481)
T cd07143 152 IPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTG 231 (481)
T ss_pred CCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999998 456789999996 99999999
Q ss_pred ChHHHHHHHHHHhc-ccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHH
Q 014211 254 SPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (429)
Q Consensus 254 s~~~~~~i~~~~~~-~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~ 332 (429)
|+.+|+.|.+.++. +++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||++++++|+++|++
T Consensus 232 s~~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~-~naGQ~C~a~~rv~V~~~i~d~f~~~l~~ 310 (481)
T cd07143 232 STLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIF-FNHGQVCCAGSRIYVQEGIYDKFVKRFKE 310 (481)
T ss_pred chHHHHHHHHHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHH-hccCCCCCCCcEEEEeHhHHHHHHHHHHH
Confidence 99999999999885 78999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccc
Q 014211 333 ELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 333 ~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (429)
+++++++|+|. +++++||++++.+++++.++|+++. .|+++++||..+ ..|+|++|||+.++++++.+++||+||||
T Consensus 311 ~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPv 390 (481)
T cd07143 311 KAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPV 390 (481)
T ss_pred HHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCe
Confidence 99999999996 5789999999999999999999885 578999999764 36899999999999999999999999999
Q ss_pred eeeEecCCHHHHHHHHHhh
Q 014211 410 LPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~~~eai~l~n~~ 428 (429)
++|++|+|.+|||+++|++
T Consensus 391 l~v~~~~~~~eai~~~n~~ 409 (481)
T cd07143 391 VAVIKFKTEEEAIKRANDS 409 (481)
T ss_pred EEEEeeCCHHHHHHHHhCC
Confidence 9999999999999999975
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-77 Score=607.60 Aligned_cols=388 Identities=25% Similarity=0.378 Sum_probs=359.8
Q ss_pred eeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHH
Q 014211 22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANM 101 (429)
Q Consensus 22 ~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~ 101 (429)
+|||| +|+.+.++++|+++|| .||++++ .++.++.+|+++++++|++||+.|+++|..+|.++|++++++
T Consensus 1 ~~i~g-~~~~~~~~~~~~~~~P--------~~~~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~ 70 (466)
T cd07138 1 FYIDG-AWVAPAGTETIDVINP--------ATEEVIG-TVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEA 70 (466)
T ss_pred CeECC-EeecCCCCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 58999 9999877655666555 9999998 677999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCch
Q 014211 102 IEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNY 181 (429)
Q Consensus 102 l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~ 181 (429)
|++++++|++++++|+|||..+++..|+..+++.+++++..++.+..... ....+..++|+|||++|+||||
T Consensus 71 l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~P~GVv~~I~p~N~ 142 (466)
T cd07138 71 YEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER--------RGNSLVVREPIGVCGLITPWNW 142 (466)
T ss_pred HHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc--------CceEEEEEeecceEEEECCCcc
Confidence 99999999999999999999988656999999999999998877644321 2345778999999999999999
Q ss_pred hhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCChHHH
Q 014211 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPRVG 258 (429)
Q Consensus 182 P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~~~~ 258 (429)
|+...++++++||++||+||+|||+.+|+++.++.+++.++ +|+|+||+++|+ .+.++.|+.|+ ++.|.||||+.+|
T Consensus 143 P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g 222 (466)
T cd07138 143 PLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAG 222 (466)
T ss_pred HHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999 999999999984 46789999997 9999999999999
Q ss_pred HHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhh
Q 014211 259 RIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338 (429)
Q Consensus 259 ~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 338 (429)
+.|.+.++.+++|+++|+|||||+||++|+|++.|++.+++++| +++||.|+++++||||+++|++|+++|++++++++
T Consensus 223 ~~i~~~aa~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 301 (466)
T cd07138 223 KRVAEAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACF-ANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYV 301 (466)
T ss_pred HHHHHHHhccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHH-hccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC----CCCceEecEEEecCCCCCCccccCccccceee
Q 014211 339 GKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (429)
Q Consensus 339 ~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v 412 (429)
+|+|+ +++++||++++.+++++.++++++. .|+++++||... ..|+|++|||+.+++++|++++||+||||++|
T Consensus 302 ~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v 381 (466)
T cd07138 302 VGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSI 381 (466)
T ss_pred CCCCCCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEE
Confidence 99996 5889999999999999999999885 578999998632 25899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHhh
Q 014211 413 VTVSIVSSAHFKLKAC 428 (429)
Q Consensus 413 ~~~~~~~eai~l~n~~ 428 (429)
++|+|.+|||+++|++
T Consensus 382 ~~~~~~~eai~~~n~~ 397 (466)
T cd07138 382 IPYDDEDEAIAIANDT 397 (466)
T ss_pred eccCCHHHHHHHHhCC
Confidence 9999999999999975
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-77 Score=603.63 Aligned_cols=376 Identities=20% Similarity=0.324 Sum_probs=350.8
Q ss_pred eEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhh
Q 014211 46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125 (429)
Q Consensus 46 ~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 125 (429)
+.+.||+||++++ .++.++.+|+++|+++|++||+.|+++++.+|.++|++++++|++++++|++++++|+|||..+++
T Consensus 9 ~~~~nP~t~~~i~-~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 87 (462)
T PRK13968 9 AISVNPATGEQLS-VLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQAR 87 (462)
T ss_pred eEeECCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHH
Confidence 6677889999999 788999999999999999999999999999999999999999999999999999999999999996
Q ss_pred HhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCC
Q 014211 126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 205 (429)
Q Consensus 126 ~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps 205 (429)
.|+..+++.+++++...+++.+..... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 88 -~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs 162 (462)
T PRK13968 88 -AEVAKSANLCDWYAEHGPAMLKAEPTL----VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHA 162 (462)
T ss_pred -HHHHHHHHHHHHHHHHHHHhhCCcccc----CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 699999999999999988876543221 124567889999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEE
Q 014211 206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283 (429)
Q Consensus 206 ~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~i 283 (429)
+.+|.++.++.+++.++ +|+|++|+++|+.+....|+.|+ +|.|.||||+++|+.|.+.++++++|+++|+|||||+|
T Consensus 163 ~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p~i 242 (462)
T PRK13968 163 PNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFI 242 (462)
T ss_pred CcChHHHHHHHHHHHHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCceE
Confidence 99999999999999999 99999999998555556688886 99999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHh
Q 014211 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLAS 362 (429)
Q Consensus 284 V~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~ 362 (429)
|++|||++.|++.+++++| +++||.|++++++|||++++++|+++|+++++++++|+|. +++++||+++..+++++.+
T Consensus 243 V~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~ 321 (462)
T PRK13968 243 VLNDADLELAVKAAVAGRY-QNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHH 321 (462)
T ss_pred ECCCCCHHHHHHHHHHHHH-hccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999999999999999999999996 5789999999999999999
Q ss_pred HHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 363 LLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 363 ~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++++. .|+++++||... ..|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 322 ~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~ 389 (462)
T PRK13968 322 QVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDS 389 (462)
T ss_pred HHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCC
Confidence 999985 578999999753 358999999999999999999999999999999999999999999975
|
|
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-77 Score=607.75 Aligned_cols=391 Identities=21% Similarity=0.302 Sum_probs=359.3
Q ss_pred eeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHH
Q 014211 22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANM 101 (429)
Q Consensus 22 ~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~ 101 (429)
+|||| +|+.+. +.+++++| |+||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|++++++
T Consensus 1 ~~i~g-~~~~~~-~~~~~~~~--------P~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~ 69 (478)
T cd07086 1 GVIGG-EWVGSG-GETFTSRN--------PANGEPIA-RVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEA 69 (478)
T ss_pred CcCCC-EEecCC-CCEEeeEC--------CCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 58999 999875 54455544 59999998 677999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCch
Q 014211 102 IEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNY 181 (429)
Q Consensus 102 l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~ 181 (429)
|++++++|++++++|+|||+.+++ .|+..+++.+++++...+.+.+..... ...+...+..++|+|||++|+||||
T Consensus 70 l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~---~~~~~~~~~~~~P~GVv~~I~pwN~ 145 (478)
T cd07086 70 LRKKKEALGRLVSLEMGKILPEGL-GEVQEMIDICDYAVGLSRMLYGLTIPS---ERPGHRLMEQWNPLGVVGVITAFNF 145 (478)
T ss_pred HHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccc---CCCCceEEEEEecceeEEEECCCCc
Confidence 999999999999999999999997 699999999999999888765433211 1123456789999999999999999
Q ss_pred hhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-----cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCCh
Q 014211 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-----VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 182 P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-----lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~ 255 (429)
|+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|+.+.+..|..|+ +|.|.||||+
T Consensus 146 P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~ 225 (478)
T cd07086 146 PVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGST 225 (478)
T ss_pred HHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcH
Confidence 99999999999999999999999999999999999999987 99999999998656778888887 9999999999
Q ss_pred HHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHh
Q 014211 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (429)
Q Consensus 256 ~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~ 335 (429)
++|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++++
T Consensus 226 ~~g~~i~~~aa~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~ 304 (478)
T cd07086 226 EVGRRVGETVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAV-GTAGQRCTTTRRLIVHESVYDEFLERLVKAYK 304 (478)
T ss_pred HHHHHHHHHHhccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHH-hccCCCCcCCeEEEEcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC---CCceEecEEEecCCCCCCccccCccccce
Q 014211 336 EFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPLL 410 (429)
Q Consensus 336 ~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~ 410 (429)
++++|+|. +++++||++++.+++++.++|+++. .|+++++||.... .|+|++|||+.+++++|.+++||+||||+
T Consensus 305 ~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl 384 (478)
T cd07086 305 QVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPIL 384 (478)
T ss_pred hCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEE
Confidence 99999996 4789999999999999999999986 5789999997643 58899999999999999999999999999
Q ss_pred eeEecCCHHHHHHHHHhh
Q 014211 411 PIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 411 ~v~~~~~~~eai~l~n~~ 428 (429)
+|++|+|.+|||+++|++
T Consensus 385 ~v~~~~~~deai~~~n~~ 402 (478)
T cd07086 385 YVIKFDSLEEAIAINNDV 402 (478)
T ss_pred EEEEeCCHHHHHHHHhCC
Confidence 999999999999999975
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-77 Score=606.22 Aligned_cols=388 Identities=20% Similarity=0.284 Sum_probs=352.9
Q ss_pred eeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHH
Q 014211 23 FIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMI 102 (429)
Q Consensus 23 ~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l 102 (429)
|||| +|+.+ +.+ +.+.||+||++++ .++.++.+|+++++++|++||+.|+++|..+|.++|++++++|
T Consensus 2 ~i~g-~~~~~--~~~--------~~~~~P~t~~~i~-~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l 69 (474)
T cd07130 2 VYDG-EWGGG--GGV--------VTSISPANGEPIA-RVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDAL 69 (474)
T ss_pred eECC-EEecC--CCe--------EEeECCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 7999 99985 333 4555559999998 6779999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchh
Q 014211 103 EEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYP 182 (429)
Q Consensus 103 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P 182 (429)
++++++|++++++|+|||+.++. +|+..+++.+++++...+.+.+... . ....+...+..++|+|||++|+|||||
T Consensus 70 ~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~P~Gvv~~I~p~N~P 145 (474)
T cd07130 70 RKKKEALGKLVSLEMGKILPEGL-GEVQEMIDICDFAVGLSRQLYGLTI-P--SERPGHRMMEQWNPLGVVGVITAFNFP 145 (474)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcCccc-c--CCCCCceEEEEEecceeEEEEccCCCH
Confidence 99999999999999999999996 7999999999999887765443221 1 112234567889999999999999999
Q ss_pred hhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHH----hhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChH
Q 014211 183 FLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL----EDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPR 256 (429)
Q Consensus 183 ~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l----~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~ 256 (429)
+...++++++||++||+||+|||+.+|.++.++++++ .++ +|+|++|+++|+.+.+..|++|+ +|.|.||||++
T Consensus 146 ~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~ 225 (474)
T cd07130 146 VAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTA 225 (474)
T ss_pred HHHHHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchH
Confidence 9999999999999999999999999999998887765 466 89999999999777889999986 99999999999
Q ss_pred HHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhh
Q 014211 257 VGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE 336 (429)
Q Consensus 257 ~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~ 336 (429)
+|+.|.+.++++++|+++|+|||||+||++|+|++.|++.+++++| .|+||.|+++++||||+++|++|+++|++++++
T Consensus 226 ~g~~i~~~aa~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~ 304 (474)
T cd07130 226 VGRQVGQAVAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAV-GTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQ 304 (474)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred hhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCccccceeeE
Q 014211 337 FFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413 (429)
Q Consensus 337 ~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~ 413 (429)
+++|+|. +++++||++++.+++++.++|+++. .|+++++||.. +..|+|++|||+.++++ |.+++||+||||++|+
T Consensus 305 l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~ 383 (474)
T cd07130 305 VRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVKEETFAPILYVL 383 (474)
T ss_pred CCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHhCCCcCCeEEEE
Confidence 9999996 4689999999999999999999996 58899999986 33589999999988766 9999999999999999
Q ss_pred ecCCHHHHHHHHHhh
Q 014211 414 TVSIVSSAHFKLKAC 428 (429)
Q Consensus 414 ~~~~~~eai~l~n~~ 428 (429)
+|+|.+|||+++|++
T Consensus 384 ~~~~~~eai~~aN~~ 398 (474)
T cd07130 384 KFDTLEEAIAWNNEV 398 (474)
T ss_pred EeCCHHHHHHHHhCC
Confidence 999999999999975
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-77 Score=606.52 Aligned_cols=391 Identities=27% Similarity=0.387 Sum_probs=360.5
Q ss_pred eeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHH
Q 014211 23 FIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMI 102 (429)
Q Consensus 23 ~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l 102 (429)
|||| +|+.+.++.+++++|| .||++++ .++.++.+|+++++++|++||+.|+.+|..+|.++|+++++.|
T Consensus 1 ~i~g-~~~~~~~~~~~~~~nP--------~t~~~i~-~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l 70 (467)
T TIGR01804 1 FIDG-EWVEASAGETREIINP--------ANQEVIA-TVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELI 70 (467)
T ss_pred CCCC-EEecCCCCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 7999 9998877655555555 8999888 6679999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchh
Q 014211 103 EEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYP 182 (429)
Q Consensus 103 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P 182 (429)
++++++|++++++|+|||..++...|+..+++.+++++...++..+... .. ..+...+..++|+|||++|+|||||
T Consensus 71 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~-~~---~~~~~~~~~~~P~Gvv~~I~p~N~P 146 (467)
T TIGR01804 71 RERNEELAKLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEII-PL---PIPSFSYTIREPLGVCVGIGAWNYP 146 (467)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccc-cC---CCCceEEEEEeeeeEEEEECCCchH
Confidence 9999999999999999999998546999999999999998877543321 11 1124468899999999999999999
Q ss_pred hhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCChHHHH
Q 014211 183 FLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPRVGR 259 (429)
Q Consensus 183 ~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~ 259 (429)
+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|++|+++|+ .+.++.|+.|+ +|.|.||||+++|+
T Consensus 147 ~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~ 226 (467)
T TIGR01804 147 LQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGK 226 (467)
T ss_pred HHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHH
Confidence 9999999999999999999999999999999999999999 999999999985 77889999997 99999999999999
Q ss_pred HHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhC
Q 014211 260 IVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339 (429)
Q Consensus 260 ~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~ 339 (429)
.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +++||.|+++++||||+++|++|+++|+++++++++
T Consensus 227 ~v~~~a~~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 305 (467)
T TIGR01804 227 KIMAAAADHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNF-FSAGQVCSNGTRVFVHNKIKEKFEARLVERTKRIKL 305 (467)
T ss_pred HHHHHHHhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHH-HhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC-----CCceEecEEEecCCCCCCccccCccccceee
Q 014211 340 KNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE-----KQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (429)
Q Consensus 340 g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~-----~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v 412 (429)
|+|. +++++||++++.+.+++.++++++. .|+++++||..+. .|+|++|||+.++++++++++||+||||++|
T Consensus 306 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v 385 (467)
T TIGR01804 306 GDGFDEATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTV 385 (467)
T ss_pred CCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEE
Confidence 9996 5889999999999999999999885 5779999997532 4889999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHhh
Q 014211 413 VTVSIVSSAHFKLKAC 428 (429)
Q Consensus 413 ~~~~~~~eai~l~n~~ 428 (429)
++|+|.+|||+++|++
T Consensus 386 ~~~~~~deai~~~n~~ 401 (467)
T TIGR01804 386 LTFSSEDEVIARANDT 401 (467)
T ss_pred EecCCHHHHHHHHhCC
Confidence 9999999999999975
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-77 Score=607.86 Aligned_cols=398 Identities=28% Similarity=0.388 Sum_probs=363.2
Q ss_pred cccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhh-hcCCCHHHHHHH
Q 014211 16 AACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS-RKTKSYEWRMSQ 94 (429)
Q Consensus 16 ~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~-w~~~~~~~R~~~ 94 (429)
.+...++|||| +|..+.++.+|+++|| +||++++ .++.++.+|+++++++|++||+. |+.++..+|.++
T Consensus 4 ~~~~~~~~i~g-~~~~~~~~~~~~~~~P--------~tg~~i~-~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~i 73 (484)
T cd07144 4 YDQPTGLFINN-EFVKSSDGETIKTVNP--------STGEVIA-SVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGEL 73 (484)
T ss_pred eecCcCcEECC-EEecCCCCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHH
Confidence 45567899999 9998766544555555 9999888 77799999999999999999996 889999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEE
Q 014211 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVL 174 (429)
Q Consensus 95 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 174 (429)
|+++++.|++++++|++++++|+|||..++...|+..+++.+++++.+.+++.+... .. ..+...+..++|+|||+
T Consensus 74 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~-~~---~~~~~~~~~~~P~GvV~ 149 (484)
T cd07144 74 LDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTI-PT---SPNKLAYTLHEPYGVCG 149 (484)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCcee-cC---CCCceEEEEEecceEEE
Confidence 999999999999999999999999998765446999999999999999888743322 11 12344688999999999
Q ss_pred EEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEE
Q 014211 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILY 251 (429)
Q Consensus 175 ~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~f 251 (429)
+|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++ +|+|++|+++| +.+.++.|+.|+ +|.|.|
T Consensus 150 ~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~f 229 (484)
T cd07144 150 QIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAF 229 (484)
T ss_pred EECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999998 567889999997 999999
Q ss_pred eCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHH
Q 014211 252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR 331 (429)
Q Consensus 252 tGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 331 (429)
|||+.+|+.|.+.++.+++|+++|+|||||+||++|||++.|++.+++++| +++||.|+++++||||+++|++|+++|+
T Consensus 230 TGS~~~g~~i~~~a~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~ 308 (484)
T cd07144 230 TGSTATGRLVMKAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIM-YNSGQNCTATSRIYVQESIYDKFVEKFV 308 (484)
T ss_pred ECcHHHHHHHHHHHHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCceEEEcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHhh-hhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC----CCceEecEEEecCCCCCCccccC
Q 014211 332 NELKE-FFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE----KQLKIAPTILLDVPDDSTIMKEE 404 (429)
Q Consensus 332 ~~~~~-~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~----~g~~~~Ptvl~~~~~~~~~~~~E 404 (429)
+++++ +++|+|. +++++||++++.+++++.++++++. .|+++++||.... .|+|++|||+.+++++|.+++||
T Consensus 309 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE 388 (484)
T cd07144 309 EHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEE 388 (484)
T ss_pred HHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCC
Confidence 99985 8889996 5789999999999999999999986 5789999987642 58999999999999999999999
Q ss_pred ccccceeeEecCCHHHHHHHHHhh
Q 014211 405 IFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 405 ~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+||||++|++|+|.+|||+++|++
T Consensus 389 ~FgPvl~v~~~~~~~eai~~~n~~ 412 (484)
T cd07144 389 IFGPVVVISKFKTYEEAIKKANDT 412 (484)
T ss_pred CCCceEEEeccCCHHHHHHHHhCC
Confidence 999999999999999999999975
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-77 Score=608.30 Aligned_cols=406 Identities=19% Similarity=0.296 Sum_probs=369.6
Q ss_pred hhhhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCC-cchhhhhcccCCCHHHHHHHHHHHHHHhhhhcC
Q 014211 7 RAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSA-TMAAEEKQMQRFDVEKAASLMKELRNNYNSRKT 85 (429)
Q Consensus 7 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~-tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~ 85 (429)
.++.++........++||+| +|+.+ +.+++ ..+|. ||++++ .++.++.+|+++++++|++||+.|+.
T Consensus 6 ~~~~~~~~~~~~~~~~~i~g-~~~~~--~~~~~--------~~~P~~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~ 73 (500)
T cd07083 6 EALRRVKEEFGRAYPLVIGG-EWVDT--KERMV--------SVSPFAPSEVVG-TTAKADKAEAEAALEAAWAAFKTWKD 73 (500)
T ss_pred HHHHHHHhhccccccceECC-EEecC--CCceE--------eeCCCCCCcEEE-EEcCCCHHHHHHHHHHHHHHHHHHhc
Confidence 34555666666778899999 99975 33344 45556 688888 67799999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceE
Q 014211 86 KSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEI 165 (429)
Q Consensus 86 ~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (429)
+|..+|.++|++++++|++++++|++++++|+|||+.++. .|+..+++.+++++..+.++.+...... ...+...++
T Consensus 74 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 150 (500)
T cd07083 74 WPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAI-DDVAEAIDFIRYYARAALRLRYPAVEVV--PYPGEDNES 150 (500)
T ss_pred CCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccC--CCCCceEEE
Confidence 9999999999999999999999999999999999999985 7999999999999999988766443211 123456788
Q ss_pred EeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHh
Q 014211 166 ISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLE 243 (429)
Q Consensus 166 ~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~ 243 (429)
.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++++++.++ +|+|+||+++| +.+.+..|+.
T Consensus 151 ~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~ 230 (500)
T cd07083 151 FYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTE 230 (500)
T ss_pred EEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999 99999999998 5678899999
Q ss_pred cC-CCEEEEeCChHHHHHHHHHHhccc------CceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEE
Q 014211 244 QK-WDKILYTGSPRVGRIVMAAAAKHL------TPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYI 316 (429)
Q Consensus 244 ~~-v~~v~ftGs~~~~~~i~~~~~~~~------~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v 316 (429)
|+ +|.|.||||+.+|+.|.+.+++++ +|+++|+|||||+||++|+|++.+++.+++++| .++||.|++++++
T Consensus 231 ~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f-~~~GQ~C~a~~rv 309 (500)
T cd07083 231 HERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAF-GFQGQKCSAASRL 309 (500)
T ss_pred CCCcCEEEEECcHHHHHHHHHHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hhcCCCCCCCeeE
Confidence 96 999999999999999999999876 999999999999999999999999999999999 9999999999999
Q ss_pred EEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccC-CCCceEecEEEecC
Q 014211 317 ITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD-EKQLKIAPTILLDV 394 (429)
Q Consensus 317 ~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~-~~g~~~~Ptvl~~~ 394 (429)
|||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++..++++++||..+ ..|+|++|||+.++
T Consensus 310 ~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g~vl~gg~~~~~~g~~~~Ptvl~~~ 389 (500)
T cd07083 310 ILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEV 389 (500)
T ss_pred EEcHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeCC
Confidence 999999999999999999999999996 5789999999999999999999987777999999764 35899999999999
Q ss_pred CCCCCccccCccccceeeEecC--CHHHHHHHHHhh
Q 014211 395 PDDSTIMKEEIFGPLLPIVTVS--IVSSAHFKLKAC 428 (429)
Q Consensus 395 ~~~~~~~~~E~fgPv~~v~~~~--~~~eai~l~n~~ 428 (429)
+++|.+++||+||||++|++|+ |.+|||+++|++
T Consensus 390 ~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~ 425 (500)
T cd07083 390 PPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANST 425 (500)
T ss_pred CCCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCC
Confidence 9999999999999999999999 999999999975
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-77 Score=601.55 Aligned_cols=379 Identities=20% Similarity=0.319 Sum_probs=351.1
Q ss_pred eEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhh
Q 014211 46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125 (429)
Q Consensus 46 ~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 125 (429)
+...||+||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||+.++.
T Consensus 3 ~~~~~P~t~~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 81 (457)
T PRK09406 3 IATINPATGETVK-TFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAK 81 (457)
T ss_pred eeeECCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH
Confidence 3456669999999 677999999999999999999999999999999999999999999999999999999999999996
Q ss_pred HhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCC
Q 014211 126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 205 (429)
Q Consensus 126 ~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps 205 (429)
.|+..+++.++|++..++++.+....... ...+...++.++|+|||++|+|||||++..++++++||++||+||+|||
T Consensus 82 -~ev~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps 159 (457)
T PRK09406 82 -AEALKCAKGFRYYAEHAEALLADEPADAA-AVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHA 159 (457)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCcccccc-CCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECC
Confidence 69999999999999999888764432111 1123456889999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEE
Q 014211 206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283 (429)
Q Consensus 206 ~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~i 283 (429)
+.+|.++.++.+++.++ +|+|+||+++++.+.+..|+.|+ ++.|.||||+++|+.|.+.++++++|+++|+|||||+|
T Consensus 160 ~~~p~~~~~l~~l~~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~i 239 (457)
T PRK09406 160 SNVPQTALYLADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFI 239 (457)
T ss_pred CcCcHHHHHHHHHHHHhCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCeeE
Confidence 99999999999999999 99999999986556778899886 99999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHh
Q 014211 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLAS 362 (429)
Q Consensus 284 V~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~ 362 (429)
|++|+|++.+++.+++++| .++||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+.+++.+
T Consensus 240 V~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~ 318 (457)
T PRK09406 240 VMPSADLDRAAETAVTARV-QNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEK 318 (457)
T ss_pred ECCCCCHHHHHHHHHHHHh-hCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999999999999999999999996 5789999999999999999
Q ss_pred HHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 363 LLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 363 ~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+|+++. .|+++++||..+ ..|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 319 ~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~ 386 (457)
T PRK09406 319 QVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANAT 386 (457)
T ss_pred HHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCC
Confidence 999885 578999999763 468999999999999999999999999999999999999999999975
|
|
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-77 Score=606.12 Aligned_cols=395 Identities=27% Similarity=0.380 Sum_probs=362.0
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhc--CCCHHHHHHHHH
Q 014211 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRK--TKSYEWRMSQIQ 96 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~--~~~~~~R~~~L~ 96 (429)
..++|||| +|+.+.++.+|+++|| .||++++ .++.++.+|++.++++|++||+.|+ .++..+|.++|+
T Consensus 3 ~~~~~I~g-~~~~~~~~~~~~~~~P--------~t~~~i~-~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~ 72 (476)
T cd07091 3 PTGLFINN-EFVDSVSGKTFPTINP--------ATEEVIC-QVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLN 72 (476)
T ss_pred cccceECC-EEecCCCCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHH
Confidence 46899999 9998766655555555 8999888 7779999999999999999999854 999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEE
Q 014211 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 97 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 176 (429)
++++.|++++++|++++++|+|||..++...|+..+++.+++++++.++..+.... . ..+...+..++|+|||++|
T Consensus 73 ~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~---~~~~~~~~~~~P~GVv~~I 148 (476)
T cd07091 73 KLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIP-I---DGNFLAYTRREPIGVCGQI 148 (476)
T ss_pred HHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-C---CCCceEEEEEeceeEEEEE
Confidence 99999999999999999999999997665579999999999999887765443221 1 1345568899999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeC
Q 014211 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftG 253 (429)
+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+|+| +.+.+..|+.|+ +|.|.|||
T Consensus 149 ~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTG 228 (476)
T cd07091 149 IPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTG 228 (476)
T ss_pred CCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999998 566788999996 99999999
Q ss_pred ChHHHHHHHHHHhc-ccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHH
Q 014211 254 SPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (429)
Q Consensus 254 s~~~~~~i~~~~~~-~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~ 332 (429)
|+.+|+.|.+.++. +++|+++|+|||||+||++|||++.|++.+++++| .++||.|+++++||||++++++|+++|++
T Consensus 229 s~~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~ 307 (476)
T cd07091 229 STAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIF-FNQGQCCCAGSRIFVQESIYDEFVEKFKA 307 (476)
T ss_pred cHHHHHHHHHHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hccCCCCcCCcEEEEeHHHHHHHHHHHHH
Confidence 99999999999987 89999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccc
Q 014211 333 ELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 333 ~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (429)
+++++++|+|. +++++||+++..+++++.++++++. .|+++++||..+ ..|+|++|||+.++++++.+++||+||||
T Consensus 308 ~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPv 387 (476)
T cd07091 308 RAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPV 387 (476)
T ss_pred HHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCe
Confidence 99999999996 5889999999999999999999886 477999999764 46899999999999999999999999999
Q ss_pred eeeEecCCHHHHHHHHHhh
Q 014211 410 LPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~~~eai~l~n~~ 428 (429)
++|++|+|++|||+++|++
T Consensus 388 l~v~~~~~~~eai~~~n~~ 406 (476)
T cd07091 388 VTILKFKTEDEVIERANDT 406 (476)
T ss_pred EEEeecCCHHHHHHHHhCC
Confidence 9999999999999999975
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-77 Score=605.42 Aligned_cols=393 Identities=23% Similarity=0.331 Sum_probs=361.7
Q ss_pred eeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHHHHHH
Q 014211 22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS--RKTKSYEWRMSQIQSIA 99 (429)
Q Consensus 22 ~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~--w~~~~~~~R~~~L~~~a 99 (429)
+|||| +|..+.++++|+++|| .||++++ .++.++.+|++.|+++|++||+. |+.+|..+|.++|++++
T Consensus 1 ~~i~g-~~~~~~~~~~~~~~~P--------~tg~~i~-~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a 70 (471)
T cd07139 1 LFIGG-RWVAPSGSETIDVVSP--------ATEEVVG-RVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLA 70 (471)
T ss_pred CeECC-EeecCCCCCeEEeECC--------CCCCEeE-EEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHH
Confidence 58999 9998766655555555 8999988 66799999999999999999985 99999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCC
Q 014211 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (429)
Q Consensus 100 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~ 179 (429)
++|++++++|++++++|+|||..++...|+..+++.+++++...+++........ ..+...+..++|+|||++|+||
T Consensus 71 ~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~ 147 (471)
T cd07139 71 DALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPG---SGGGHVLVRREPVGVVAAIVPW 147 (471)
T ss_pred HHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEEeccEEEEEcCC
Confidence 9999999999999999999999887656999999999999998887654332211 1244568899999999999999
Q ss_pred chhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHH
Q 014211 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRV 257 (429)
Q Consensus 180 n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~ 257 (429)
|||+...++++++||++||+||+|||+.+|+++.++.+++.++ +|+|++|+++|+.+.+..|+.|+ ++.|.||||+.+
T Consensus 148 N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~ 227 (471)
T cd07139 148 NAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAA 227 (471)
T ss_pred chHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHH
Confidence 9999999999999999999999999999999999999999999 99999999998777889999997 999999999999
Q ss_pred HHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhh
Q 014211 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337 (429)
Q Consensus 258 ~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 337 (429)
|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +++||.|+++++||||++++++|+++|+++++++
T Consensus 228 g~~v~~~~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~ 306 (471)
T cd07139 228 GRRIAAVCGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASL-MNNGQVCVALTRILVPRSRYDEVVEALAAAVAAL 306 (471)
T ss_pred HHHHHHHHHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC---CCceEecEEEecCCCCCCccccCccccceee
Q 014211 338 FGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (429)
Q Consensus 338 ~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v 412 (429)
++|+|. +++++||++++.+.+++.+++++++ .|+++++||..+. .|+|++|||+.++++++++++||+||||++|
T Consensus 307 ~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v 386 (471)
T cd07139 307 KVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSV 386 (471)
T ss_pred CcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEE
Confidence 999996 5789999999999999999999886 5779999997533 4889999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHhh
Q 014211 413 VTVSIVSSAHFKLKAC 428 (429)
Q Consensus 413 ~~~~~~~eai~l~n~~ 428 (429)
++|+|.+|||+++|++
T Consensus 387 ~~~~~~~eai~~~n~~ 402 (471)
T cd07139 387 IPYDDEDDAVRIANDS 402 (471)
T ss_pred eecCCHHHHHHHHhCC
Confidence 9999999999999975
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-77 Score=604.48 Aligned_cols=390 Identities=15% Similarity=0.208 Sum_probs=345.0
Q ss_pred ceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHH-hhhhcCCCHHHHHHHHHHHH
Q 014211 21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN-YNSRKTKSYEWRMSQIQSIA 99 (429)
Q Consensus 21 ~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A-~~~w~~~~~~~R~~~L~~~a 99 (429)
++|||| +|+.+. +.+ +.++||+||++++ .++.++ +|+++||++|++| |+.|+.+++.+|+++|++++
T Consensus 2 ~~~I~g-~~~~~~-~~~--------~~~~nP~tg~~~~-~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a 69 (513)
T cd07128 2 QSYVAG-QWHAGT-GDG--------RTLHDAVTGEVVA-RVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALA 69 (513)
T ss_pred ceeECC-EEEcCC-CCE--------EEeECCCCCCEEE-EEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHH
Confidence 689999 999874 434 4455559999998 455665 8999999999998 79999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCccc-----ccccCCC-CcceEEeec-ceE
Q 014211 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAK-----TSLTTYP-SSAEIISEP-LGV 172 (429)
Q Consensus 100 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~P-~Gv 172 (429)
++|++++++|+++ +.|+|||+.+++ .|+..+++.++||++..+++.+..... .+....+ ...++.++| +||
T Consensus 70 ~~l~~~~~~la~l-~~e~Gkp~~ea~-~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GV 147 (513)
T cd07128 70 KYLMERKEDLYAL-SAATGATRRDSW-IDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGV 147 (513)
T ss_pred HHHHHHHHHHHHH-HHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccE
Confidence 9999999999996 999999999997 699999999999999988876422110 0000111 135678999 599
Q ss_pred EEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh--cCCCceEEecCCHHHHHHHHhc--CCCE
Q 014211 173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY--VDNSAVRVVEGAVAETSALLEQ--KWDK 248 (429)
Q Consensus 173 v~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a--lP~~~v~~v~~~~~~~~~L~~~--~v~~ 248 (429)
|++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+++|+.. .+..+ .+|.
T Consensus 148 v~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~---~~~~~l~~~d~ 224 (513)
T cd07128 148 AVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVG---DLLDHLGEQDV 224 (513)
T ss_pred EEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChH---HHhcccCCCCE
Confidence 99999999999999999999999999999999999999999999999998 79999999998532 23333 4899
Q ss_pred EEEeCChHHHHHHHHHH--hcccCceeeecCCCCcEEEcCCCC-----HHHHHHHHHHHHHHhcCCCccccccEEEEeCC
Q 014211 249 ILYTGSPRVGRIVMAAA--AKHLTPVILELGGKSPAVVDSTIN-----LQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321 (429)
Q Consensus 249 v~ftGs~~~~~~i~~~~--~~~~~~~~~e~~G~~~~iV~~dad-----l~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~ 321 (429)
|.||||+++|+.|.+.+ +++++|+++|+|||||+||++||| ++.+++.+++++| .|+||.|++++|+|||++
T Consensus 225 v~fTGS~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f-~~aGQ~C~a~~rv~V~~~ 303 (513)
T cd07128 225 VAFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMT-VKAGQKCTAIRRAFVPEA 303 (513)
T ss_pred EEEECCHHHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHH-HhcCCcccCCceEEEehH
Confidence 99999999999999985 478999999999999999999999 9999999999999 999999999999999999
Q ss_pred chHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccC--------CCCceEecEEEe
Q 014211 322 FAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD--------EKQLKIAPTILL 392 (429)
Q Consensus 322 ~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~--------~~g~~~~Ptvl~ 392 (429)
+|++|+++|+++++++++|+|. +++++||++++.+++++.++|++++.++++++||... ..|+|++|||+.
T Consensus 304 i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~ 383 (513)
T cd07128 304 RVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLL 383 (513)
T ss_pred HHHHHHHHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEe
Confidence 9999999999999999999996 5889999999999999999999997669999999652 358999999999
Q ss_pred cCCC--CCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 393 DVPD--DSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 393 ~~~~--~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++ +|.+++||+||||++|++|+|.+|||+++|++
T Consensus 384 ~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~ 421 (513)
T cd07128 384 CDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARG 421 (513)
T ss_pred ccCCcccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcC
Confidence 8887 48999999999999999999999999999975
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-77 Score=606.23 Aligned_cols=390 Identities=25% Similarity=0.350 Sum_probs=359.3
Q ss_pred eeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHH
Q 014211 23 FIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQSIAN 100 (429)
Q Consensus 23 ~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~ 100 (429)
|||| +|..+.++.+|+++|| .||++++ .++.++.+|+++++++|++||+ .|+.++..+|.++|+++++
T Consensus 1 ~i~g-~~~~~~~~~~~~~~~P--------~tg~~i~-~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~ 70 (482)
T cd07119 1 YIDG-EWVEAASGKTRDIINP--------ANGEVIA-TVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIAD 70 (482)
T ss_pred CCCC-EEecCCCCCeEEeeCC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHH
Confidence 7999 9998766655555555 8999888 6679999999999999999997 5999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCc
Q 014211 101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN 180 (429)
Q Consensus 101 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n 180 (429)
.|++++++|++++++|+|||..+++ .|+..+++.+++++...++..+... .. ..+...++.++|+|||++|+|||
T Consensus 71 ~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P~GvV~~I~p~N 145 (482)
T cd07119 71 KIREDAEELARLETLNTGKTLRESE-IDIDDVANCFRYYAGLATKETGEVY-DV---PPHVISRTVREPVGVCGLITPWN 145 (482)
T ss_pred HHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-cC---CCCceEEEEEeeeeeEEEEcCCc
Confidence 9999999999999999999999997 5999999999999998877544332 11 13445789999999999999999
Q ss_pred hhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCChHH
Q 014211 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPRV 257 (429)
Q Consensus 181 ~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~~~ 257 (429)
||+...++++++||++||+||+|||+.+|.++.++++++.++ +|+|++|+++|+ .+.+..|++|+ +|.|.||||+++
T Consensus 146 ~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~ 225 (482)
T cd07119 146 YPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTAT 225 (482)
T ss_pred hHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHH
Confidence 999999999999999999999999999999999999999999 999999999985 45789999996 999999999999
Q ss_pred HHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhh
Q 014211 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337 (429)
Q Consensus 258 ~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 337 (429)
|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .++||.|+++++||||+++|++|+++|+++++++
T Consensus 226 g~~i~~~aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~~ 304 (482)
T cd07119 226 GRSIMRAAAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVF-FNAGQVCSAGSRLLVEESIHDKFVAALAERAKKI 304 (482)
T ss_pred HHHHHHHHHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC-----CCceEecEEEecCCCCCCccccCccccce
Q 014211 338 FGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE-----KQLKIAPTILLDVPDDSTIMKEEIFGPLL 410 (429)
Q Consensus 338 ~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~-----~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~ 410 (429)
++|+|. +++++||++++.+++++.++++++. .|+++++||.... .|+|++|||+.+++++|.+++||+||||+
T Consensus 305 ~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl 384 (482)
T cd07119 305 KLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVL 384 (482)
T ss_pred CCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceE
Confidence 999986 5789999999999999999999886 4779999997532 58999999999999999999999999999
Q ss_pred eeEecCCHHHHHHHHHhh
Q 014211 411 PIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 411 ~v~~~~~~~eai~l~n~~ 428 (429)
+|++|+|++|||+++|++
T Consensus 385 ~v~~~~~~deai~~~n~~ 402 (482)
T cd07119 385 TVERFDTEEEAIRLANDT 402 (482)
T ss_pred EEeccCCHHHHHHHHhCC
Confidence 999999999999999975
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-77 Score=601.45 Aligned_cols=390 Identities=26% Similarity=0.373 Sum_probs=359.3
Q ss_pred cccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHH
Q 014211 14 TGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMS 93 (429)
Q Consensus 14 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~ 93 (429)
.+-+.+.++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++++++|++||+.|+++|..+|.+
T Consensus 16 ~~~~~~~~~~i~g-~~~~~~~~~~~~~~nP--------~t~~~i~-~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~ 85 (480)
T cd07111 16 DAHDRSFGHFING-KWVKPENRKSFPTINP--------ATGEVLA-SVLQAEEEDVDAAVAAARTAFESWSALPGHVRAR 85 (480)
T ss_pred hhccccccceECC-EEecCCCCCeEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHH
Confidence 3445677899999 9998766645555555 9999998 6679999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEE
Q 014211 94 QIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV 173 (429)
Q Consensus 94 ~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 173 (429)
+|++++++|++++++|++++++|+|||+.+++..|+..+++.+++++.+.+...+ .+..++|+|||
T Consensus 86 ~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~--------------~~~~~~P~GVV 151 (480)
T cd07111 86 HLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT--------------ELAGWKPVGVV 151 (480)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------------CcccceecceE
Confidence 9999999999999999999999999999999756999999999988876654311 13457999999
Q ss_pred EEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEE
Q 014211 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILY 251 (429)
Q Consensus 174 ~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~f 251 (429)
++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|+.+.+..|+.|+ +|.|.|
T Consensus 152 ~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~f 231 (480)
T cd07111 152 GQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAF 231 (480)
T ss_pred EEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEE
Confidence 9999999999999999999999999999999999999999999999999 99999999998667888999997 999999
Q ss_pred eCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHH
Q 014211 252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR 331 (429)
Q Consensus 252 tGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 331 (429)
|||+.+|+.|.+.++++++|+++|+|||||+||++|+|++.+++.+++++| .++||.|+++++||||++++++|+++|+
T Consensus 232 tGs~~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f-~~~GQ~C~a~~ri~V~~~i~d~f~~~l~ 310 (480)
T cd07111 232 TGSTEVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIW-FNQGQVCCAGSRLLVQESVAEELIRKLK 310 (480)
T ss_pred ECCHHHHHHHHHHHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHH-hcCCCcCcCCceEEEcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCcccc
Q 014211 332 NELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGP 408 (429)
Q Consensus 332 ~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgP 408 (429)
++++++++|+|. +++++||++++.+++++.++++++. .|+++++||.. +..|+|++|||+.+++++|.+++||+|||
T Consensus 311 ~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgP 390 (480)
T cd07111 311 ERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGP 390 (480)
T ss_pred HHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCC
Confidence 999999999996 5789999999999999999999985 47788888864 44689999999999999999999999999
Q ss_pred ceeeEecCCHHHHHHHHHhh
Q 014211 409 LLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 409 v~~v~~~~~~~eai~l~n~~ 428 (429)
|++|++|+|.+|||+++|++
T Consensus 391 vl~v~~~~~~deai~~~n~~ 410 (480)
T cd07111 391 VLVVLTFRTAKEAVALANNT 410 (480)
T ss_pred eeEeecCCCHHHHHHHHhCC
Confidence 99999999999999999975
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-77 Score=601.93 Aligned_cols=391 Identities=25% Similarity=0.381 Sum_probs=360.3
Q ss_pred eeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHH
Q 014211 23 FIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMI 102 (429)
Q Consensus 23 ~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l 102 (429)
|||| +|+.+.++.+++++|| .||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|
T Consensus 1 ~i~g-~~~~~~~~~~~~~~~P--------~t~~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l 70 (468)
T cd07088 1 YING-EFVPSSSGETIDVLNP--------ATGEVVA-TVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLI 70 (468)
T ss_pred CCCC-EEecCCCCCeEEeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 7999 9998766655555555 8999998 7779999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchh
Q 014211 103 EEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYP 182 (429)
Q Consensus 103 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P 182 (429)
++++++|++++++|+|||..+++ .|+..+++.+++++.+.++..+... . ....+...+..++|+|||++|+|||||
T Consensus 71 ~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~a~~~~~~~~-~--~~~~~~~~~~~~~P~Gvv~~I~p~N~P 146 (468)
T cd07088 71 RENADELAKLIVEEQGKTLSLAR-VEVEFTADYIDYMAEWARRIEGEII-P--SDRPNENIFIFKVPIGVVAGILPWNFP 146 (468)
T ss_pred HHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCccc-c--CccccceeEEEEecceeEEEEccCchH
Confidence 99999999999999999999997 6999999999999988876544321 1 111244678899999999999999999
Q ss_pred hhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCChHHHH
Q 014211 183 FLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPRVGR 259 (429)
Q Consensus 183 ~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~ 259 (429)
+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|+ .+.+..|+.|+ +|.|.||||+.+|+
T Consensus 147 ~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~ 226 (468)
T cd07088 147 FFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQ 226 (468)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHH
Confidence 9999999999999999999999999999999999999999 999999999985 45778999996 99999999999999
Q ss_pred HHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhC
Q 014211 260 IVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339 (429)
Q Consensus 260 ~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~ 339 (429)
.|.+.++++++|+++|+|||||+||++|+|++.+++.+++++| +++||.|+++++||||++++++|+++|+++++++++
T Consensus 227 ~i~~~aa~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 305 (468)
T cd07088 227 KIMEAAAENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRI-INCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKV 305 (468)
T ss_pred HHHHHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHh-cccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC--CCceEecEEEecCCCCCCccccCccccceeeEec
Q 014211 340 KNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE--KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415 (429)
Q Consensus 340 g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~ 415 (429)
|+|. +++++||++++.+++++.++|+++. .|+++++||..+. .|+|++|||+.+++++|.+++||+||||++|++|
T Consensus 306 g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~ 385 (468)
T cd07088 306 GDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKF 385 (468)
T ss_pred CCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEec
Confidence 9996 5789999999999999999999985 5789999997643 5899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 014211 416 SIVSSAHFKLKAC 428 (429)
Q Consensus 416 ~~~~eai~l~n~~ 428 (429)
+|++|||+++|++
T Consensus 386 ~~~~eai~~~n~~ 398 (468)
T cd07088 386 SSLDEAIELANDS 398 (468)
T ss_pred CCHHHHHHHHhCC
Confidence 9999999999974
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-76 Score=599.44 Aligned_cols=389 Identities=23% Similarity=0.318 Sum_probs=353.7
Q ss_pred eeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHH
Q 014211 22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANM 101 (429)
Q Consensus 22 ~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~ 101 (429)
+|||| +|+.+ ++.++ .+.||+||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|++++++
T Consensus 1 ~~i~g-~~~~~-~~~~~--------~~~~P~t~~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~ 69 (484)
T TIGR03240 1 LFIDG-KWRAG-QGESF--------SSTNPATQEVLW-QGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAAL 69 (484)
T ss_pred CeECC-EEecC-CCCEE--------EeECCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHH
Confidence 58999 99876 34444 445559999998 677999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCch
Q 014211 102 IEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNY 181 (429)
Q Consensus 102 l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~ 181 (429)
|++++++|++++++|+|||..++. .|+..+++.+++++..+..+.+..... ..+...++.++|+|||++|+||||
T Consensus 70 l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~ 144 (484)
T TIGR03240 70 LEERKEALARVIARETGKPLWETR-TEVASMIGKVAISIKAYHERTGESENP----MPDGRAVLRHRPHGVVAVFGPYNF 144 (484)
T ss_pred HHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccC----CCCceeEEEEecccEEEEECCCch
Confidence 999999999999999999999996 699999999999988887765433211 123456788999999999999999
Q ss_pred hhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHH
Q 014211 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGR 259 (429)
Q Consensus 182 P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~ 259 (429)
|+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+++|+.+.++.|+.|+ +|.|.||||+++|+
T Consensus 145 P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~ 224 (484)
T TIGR03240 145 PGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGH 224 (484)
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999999 99999999999777889999996 99999999999999
Q ss_pred HHHHHHhcc-cCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCch-HHHHHHHHHHHhhh
Q 014211 260 IVMAAAAKH-LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFA-PKLIDSLRNELKEF 337 (429)
Q Consensus 260 ~i~~~~~~~-~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~-~~f~~~l~~~~~~~ 337 (429)
.|.+.++.+ .+++++|+|||||+||++|||++.|++.+++++| .++||.|+++++||||++++ ++|+++|.+.++++
T Consensus 225 ~i~~~aa~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~~ 303 (484)
T TIGR03240 225 LLHRQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAF-ISAGQRCTCARRLLVPDGAQGDAFLARLVEVAERL 303 (484)
T ss_pred HHHHHhhhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHhc
Confidence 999987765 6789999999999999999999999999999999 99999999999999999985 99999999999999
Q ss_pred hCCCC--CCCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCccccceeeE
Q 014211 338 FGKNP--MESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413 (429)
Q Consensus 338 ~~g~~--~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~ 413 (429)
++|+| ++++++||+++..+++++.++++++. .|+++++||.. +..|+|++|||+ +++++|.+++||+||||++|+
T Consensus 304 ~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~ 382 (484)
T TIGR03240 304 TVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHFGPLLQVI 382 (484)
T ss_pred ccCCCCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEE
Confidence 99997 35679999999999999999999986 47898888764 445789999999 688999999999999999999
Q ss_pred ecCCHHHHHHHHHhh
Q 014211 414 TVSIVSSAHFKLKAC 428 (429)
Q Consensus 414 ~~~~~~eai~l~n~~ 428 (429)
+|+|++|||+++|++
T Consensus 383 ~~~~~~eai~~~n~~ 397 (484)
T TIGR03240 383 RYDDFDEAIAIANNT 397 (484)
T ss_pred EeCCHHHHHHHHhCC
Confidence 999999999999975
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-76 Score=599.01 Aligned_cols=392 Identities=21% Similarity=0.308 Sum_probs=360.2
Q ss_pred ceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 014211 21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN 100 (429)
Q Consensus 21 ~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~ 100 (429)
++|||| +|+.+.++..++++|| .||++++ .++.++.+|+++++++|++||+.|+++|..+|.++|+++++
T Consensus 2 ~~~i~g-~~~~~~~~~~~~~~~P--------~t~~~i~-~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~ 71 (477)
T TIGR01722 2 NHWIGG-KFAEGASGTYIPVTNP--------ATNEVTT-KVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQA 71 (477)
T ss_pred ceeECC-EEecCCCCCeEeeeCC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 579999 9998766655555555 9999998 77799999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCc
Q 014211 101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN 180 (429)
Q Consensus 101 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n 180 (429)
+|++++++|+++++.|+|||+.+++ .|+..+++.+++++...+...+..... ...+...+..++|+||+++|+|||
T Consensus 72 ~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~i~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~P~Gvv~~I~p~N 147 (477)
T TIGR01722 72 LLKEHRDEIAELITAEHGKTHSDAL-GDVARGLEVVEHACGVNSLLKGETSTQ---VATRVDVYSIRQPLGVCAGITPFN 147 (477)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccc---CCCCceEEEEEcccceEEEEccCC
Confidence 9999999999999999999999996 799999999999998776654332211 112335678899999999999999
Q ss_pred hhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHH
Q 014211 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVG 258 (429)
Q Consensus 181 ~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~ 258 (429)
||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++|+.+.+..|++|+ ++.|.||||+.+|
T Consensus 148 ~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g 227 (477)
T TIGR01722 148 FPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIG 227 (477)
T ss_pred hHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHH
Confidence 999999999999999999999999999999999999999999 99999999999877889999997 9999999999999
Q ss_pred HHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhh
Q 014211 259 RIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338 (429)
Q Consensus 259 ~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 338 (429)
+.|.+.++.+++|+++|+||+||+||++|||++.+++.+++++| .++||.|+++++||||+++ ++|+++|++++++++
T Consensus 228 ~~v~~~a~~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f-~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~~~ 305 (477)
T TIGR01722 228 RYIHTTGSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAY-GAAGQRCMAISAAVLVGAA-DEWVPEIRERAEKIR 305 (477)
T ss_pred HHHHHHHHhcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999 9999999999999999999 999999999999999
Q ss_pred CCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-----CCCceEecEEEecCCCCCCccccCcccccee
Q 014211 339 GKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (429)
Q Consensus 339 ~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~ 411 (429)
+|+|. +++++||++++.+++++.++++++. .|+++++||... ..|+|++|||+.+++++|.+++||+||||++
T Consensus 306 ~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~ 385 (477)
T TIGR01722 306 IGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLC 385 (477)
T ss_pred CCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEE
Confidence 99996 5889999999999999999999986 577999998651 2588999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHhh
Q 014211 412 IVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 412 v~~~~~~~eai~l~n~~ 428 (429)
|++|+|++|||+++|++
T Consensus 386 V~~~~~~~eai~~~n~~ 402 (477)
T TIGR01722 386 VLEADTLEEAIALINAS 402 (477)
T ss_pred EEEeCCHHHHHHHHhCC
Confidence 99999999999999986
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-76 Score=600.00 Aligned_cols=394 Identities=22% Similarity=0.308 Sum_probs=357.6
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 014211 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 97 (429)
...++|||| +|+.+.++.+++++ ||+||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|++
T Consensus 14 ~~~~~~i~G-~~~~~~~~~~~~~~--------~P~t~~~i~-~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~ 83 (496)
T PLN00412 14 DVYKYYADG-EWRTSSSGKSVAIT--------NPSTRKTQY-KVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHK 83 (496)
T ss_pred cccCceECC-EEecCCCCCeEEeE--------CCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 667899999 99987666445554 559999997 77799999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcc-cccc---cCCCCcceEEeecceEE
Q 014211 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKA-KTSL---TTYPSSAEIISEPLGVV 173 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~P~Gvv 173 (429)
+++.|++++++|++++++|+|||..++. .|+..+++.+++++..+.++...... .... ...+...+..++|+|||
T Consensus 84 ~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 162 (496)
T PLN00412 84 AAAILKEHKAPIAECLVKEIAKPAKDAV-TEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVV 162 (496)
T ss_pred HHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEE
Confidence 9999999999999999999999999996 79999999999999888776543221 1100 01122457889999999
Q ss_pred EEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEE
Q 014211 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKIL 250 (429)
Q Consensus 174 ~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ 250 (429)
++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|++++|+++|+ .+.+..|+.|+ ++.|.
T Consensus 163 ~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ 242 (496)
T PLN00412 163 LAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCIS 242 (496)
T ss_pred EEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhcCCCcCEEE
Confidence 9999999999999999999999999999999999999999999999999 999999999984 56788899997 99999
Q ss_pred EeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHH
Q 014211 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (429)
Q Consensus 251 ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 330 (429)
|||| .+|+.+.+.++ ++|+++|+|||||+||++|||++.|++.+++++| +++||.|++++++|||+++|++|+++|
T Consensus 243 ftGs-~~g~~v~~~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l 318 (496)
T PLN00412 243 FTGG-DTGIAISKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGF-SYSGQRCTAVKVVLVMESVADALVEKV 318 (496)
T ss_pred EeCh-HHHHHHHHHhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHH-hcCCCCCccCeEEEEcHHHHHHHHHHH
Confidence 9999 99999998875 7899999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccc
Q 014211 331 RNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 331 ~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (429)
+++++++++|+|.+++++||+++..+++++.++|+++. .|+++++||.. .|+|++|||+.++++++++++||+||||
T Consensus 319 ~~~~~~~~~g~p~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~--~g~~~~Ptvl~~v~~~~~i~~eE~FgPv 396 (496)
T PLN00412 319 NAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR--EGNLIWPLLLDNVRPDMRIAWEEPFGPV 396 (496)
T ss_pred HHHHHhCccCCCcccCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCeEEecEEEeCCCCCCHHHhCcCCCCe
Confidence 99999999999977889999999999999999999886 47788887743 6899999999999999999999999999
Q ss_pred eeeEecCCHHHHHHHHHhh
Q 014211 410 LPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~~~eai~l~n~~ 428 (429)
++|++|+|.+|||+++|++
T Consensus 397 l~v~~~~~~deai~~an~~ 415 (496)
T PLN00412 397 LPVIRINSVEEGIHHCNAS 415 (496)
T ss_pred EEEEEeCCHHHHHHHHhCC
Confidence 9999999999999999975
|
|
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-76 Score=600.10 Aligned_cols=392 Identities=22% Similarity=0.355 Sum_probs=358.6
Q ss_pred eeeecceeeccCCccccccccCCceEeeeCCc-chhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 014211 22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN 100 (429)
Q Consensus 22 ~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~ 100 (429)
+|||| +|+.+.++.+++++|| +| ++.++ .++.++.+|+++++++|++||+.|+.++..+|.++|+++++
T Consensus 1 ~~i~g-~~~~~~~~~~~~~~~P--------~t~~~~~~-~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~ 70 (478)
T cd07131 1 NYIGG-EWVDSASGETFDSRNP--------ADLEEVVG-TFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAE 70 (478)
T ss_pred CcCCC-EeecCCCCCeEEEECC--------CCCCeEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 58999 9998766655555555 87 46666 67799999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCc
Q 014211 101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN 180 (429)
Q Consensus 101 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n 180 (429)
+|++++++|++++++|+|||+.+++ .|+..+++.+++++...+...+..... ...+...+.+++|+|||++|+|||
T Consensus 71 ~l~~~~~ela~~~~~e~Gk~~~~~~-~ev~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~I~p~N 146 (478)
T cd07131 71 LLKKRKEELARLVTREMGKPLAEGR-GDVQEAIDMAQYAAGEGRRLFGETVPS---ELPNKDAMTRRQPIGVVALITPWN 146 (478)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCccccc---CCCCceEEEEeeceeEEEEECCcC
Confidence 9999999999999999999999997 699999999999999887754332211 112335688999999999999999
Q ss_pred hhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHH
Q 014211 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRV 257 (429)
Q Consensus 181 ~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~ 257 (429)
||+...++++++||++||+||+|||+.+|+++..+.+++.++ +|+|+||+++| +.+.+..|+.|+ +|.|.||||+.+
T Consensus 147 ~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~ 226 (478)
T cd07131 147 FPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEV 226 (478)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHH
Confidence 999999999999999999999999999999999999999999 99999999998 445888999996 999999999999
Q ss_pred HHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhh
Q 014211 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337 (429)
Q Consensus 258 ~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 337 (429)
|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +++||.|+++++||||+++|++|+++|+++++++
T Consensus 227 g~~i~~~aa~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~ 305 (478)
T cd07131 227 GERIGETCARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAF-GTTGQRCTATSRLIVHESVYDEFLKRFVERAKRL 305 (478)
T ss_pred HHHHHHHHhhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-----CCCceEecEEEecCCCCCCccccCccccce
Q 014211 338 FGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLL 410 (429)
Q Consensus 338 ~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~ 410 (429)
++|+|. +++++||++++.+++++.++++++. .|+++++||... ..|+|++|||+.++++++++++||+||||+
T Consensus 306 ~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl 385 (478)
T cd07131 306 RVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVV 385 (478)
T ss_pred CCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeE
Confidence 999996 5789999999999999999999986 577999998652 358999999999999999999999999999
Q ss_pred eeEecCCHHHHHHHHHhh
Q 014211 411 PIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 411 ~v~~~~~~~eai~l~n~~ 428 (429)
+|++|+|.+|||+++|++
T Consensus 386 ~v~~~~~~~eai~~~n~~ 403 (478)
T cd07131 386 ALIEVSSLEEAIEIANDT 403 (478)
T ss_pred EEEEeCCHHHHHHHHhCC
Confidence 999999999999999975
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-76 Score=595.38 Aligned_cols=386 Identities=26% Similarity=0.368 Sum_probs=353.3
Q ss_pred ceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q 014211 27 YTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKE 106 (429)
Q Consensus 27 ~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (429)
.+|+.+.++.+++++|| +||++++ .++.++.+|+++++++|++|++.|+.++..+|.++|++++++|++++
T Consensus 1 g~~~~~~~~~~~~~~~P--------~t~~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 71 (465)
T cd07151 1 GEWRDGTSERTIDVLNP--------YTGETLA-EIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERR 71 (465)
T ss_pred CCceeCCCCCeEeeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhH
Confidence 17888766544555555 9999988 77799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhh
Q 014211 107 EEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLS 186 (429)
Q Consensus 107 ~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 186 (429)
++|++++++|+||++.++. .|+..+++.+++++...+++.+... . ....+...++.++|+|||++|+|||||+...
T Consensus 72 ~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~ 147 (465)
T cd07151 72 DEIVEWLIRESGSTRIKAN-IEWGAAMAITREAATFPLRMEGRIL-P--SDVPGKENRVYREPLGVVGVISPWNFPLHLS 147 (465)
T ss_pred HHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHhHHHhcCccc-c--CCCCCceeEEEEecceEEEEECCCChHHHHH
Confidence 9999999999999999996 5999999999999987766533221 1 1113445688999999999999999999999
Q ss_pred hhHHHHHHhcCCeEEecCCCCChHHH-HHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHH
Q 014211 187 LDPVIGAIAAGNAVVLKPSEIAPATS-SLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVM 262 (429)
Q Consensus 187 ~~~~~~ALaaGN~vV~kps~~~~~~~-~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~ 262 (429)
++++++||++||+||+|||+.+|.++ .++.+++.++ +|+|+||+++| +.+.+..|++|+ ++.|.||||+++|+.|.
T Consensus 148 ~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~ 227 (465)
T cd07151 148 MRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIG 227 (465)
T ss_pred HHHHHHHHHcCCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 99999999999999999999999996 6899999999 99999999998 466789999997 99999999999999999
Q ss_pred HHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCC
Q 014211 263 AAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNP 342 (429)
Q Consensus 263 ~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~ 342 (429)
+.++++++|+++|+|||||+||++|+|++.|++.+++++| .|+||.|+++++||||+++|++|+++|+++++++++|+|
T Consensus 228 ~~aa~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p 306 (465)
T cd07151 228 ELAGRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKF-LHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDP 306 (465)
T ss_pred HHHHhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred C-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHH
Q 014211 343 M-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSS 420 (429)
Q Consensus 343 ~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~e 420 (429)
. +++++||++++.+++++.++++++. .|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+|.+|
T Consensus 307 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 384 (465)
T cd07151 307 SDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA--EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEE 384 (465)
T ss_pred CCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCc--CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHH
Confidence 6 5789999999999999999999885 47799999865 589999999999999999999999999999999999999
Q ss_pred HHHHHHhh
Q 014211 421 AHFKLKAC 428 (429)
Q Consensus 421 ai~l~n~~ 428 (429)
||+++|++
T Consensus 385 ai~~~n~~ 392 (465)
T cd07151 385 ALELANDT 392 (465)
T ss_pred HHHHHhCC
Confidence 99999975
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-76 Score=592.95 Aligned_cols=374 Identities=24% Similarity=0.344 Sum_probs=348.0
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhh
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE 128 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 128 (429)
+||+||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..+++ .|
T Consensus 2 ~~P~tg~~i~-~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~e 79 (448)
T TIGR01780 2 YNPATGEIIG-TVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAK-GE 79 (448)
T ss_pred cCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence 4679999999 667999999999999999999999999999999999999999999999999999999999999996 69
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCC
Q 014211 129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA 208 (429)
Q Consensus 129 v~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~ 208 (429)
+..+++.+++++...+++.+..... ...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~ 156 (448)
T TIGR01780 80 ILYAASFLEWFAEEAKRVYGDTIPS---PQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQT 156 (448)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccC---CCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccc
Confidence 9999999999998887765432211 1223445778999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCceEEecCC--HHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEE
Q 014211 209 PATSSLLAKLLEDY-VDNSAVRVVEGA--VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284 (429)
Q Consensus 209 ~~~~~~l~~~l~~a-lP~~~v~~v~~~--~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV 284 (429)
|+++..+++++.++ +|+|++|+++|+ .+.++.|+.|+ ++.|.||||+.+|+.|.+.++.+++|+++|+|||||+||
T Consensus 157 p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV 236 (448)
T TIGR01780 157 PLSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIV 236 (448)
T ss_pred hHHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEE
Confidence 99999999999999 999999999985 56789999996 999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhH
Q 014211 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASL 363 (429)
Q Consensus 285 ~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~ 363 (429)
++|+|++.+++.+++++| .++||.|+++++||||+++|++|+++|+++++++++|+|. +++++||++++.+++++.++
T Consensus 237 ~~dadl~~aa~~iv~~~f-~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~ 315 (448)
T TIGR01780 237 FDDADIDQAVEGAMASKF-RNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKH 315 (448)
T ss_pred CCCCCHHHHHHHHHHHHH-HhcCCcccCCceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999996 58899999999999999999
Q ss_pred HHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 364 LDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 364 i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
|++++ .|+++++||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|++
T Consensus 316 i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~ 382 (448)
T TIGR01780 316 IADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDT 382 (448)
T ss_pred HHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCC
Confidence 99986 578999999764 358999999999999999999999999999999999999999999986
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-76 Score=610.81 Aligned_cols=390 Identities=16% Similarity=0.206 Sum_probs=346.3
Q ss_pred ceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHH-hhhhcCCCHHHHHHHHHHHH
Q 014211 21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN-YNSRKTKSYEWRMSQIQSIA 99 (429)
Q Consensus 21 ~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A-~~~w~~~~~~~R~~~L~~~a 99 (429)
++|||| +|+.+. +.+++++|| +||++++ .++.++ +|+++||++|++| |+.|+.+|+.+|+++|++++
T Consensus 2 ~~~i~g-~~~~~~-~~~~~v~nP--------~tg~~i~-~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a 69 (663)
T TIGR02278 2 QSYLSG-EWRTGQ-GEGVPVRDA--------STGEVLA-RVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALA 69 (663)
T ss_pred ceeECC-EEEcCC-CCeEeccCC--------CCCCEEE-EEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHH
Confidence 689999 999874 444555555 9999888 566888 5999999999996 99999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcc----c-ccccCC-CCcceEEeecc-eE
Q 014211 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKA----K-TSLTTY-PSSAEIISEPL-GV 172 (429)
Q Consensus 100 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~----~-~~~~~~-~~~~~~~~~P~-Gv 172 (429)
++|++++++|++ +++|+|||+.+++ .|+..+++.++|++...+++...... . .+.... ....++.++|+ ||
T Consensus 70 ~~l~~~~~ela~-~~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gv 147 (663)
T TIGR02278 70 QYLSERKEALYA-LAATTGATRRDNW-VDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGV 147 (663)
T ss_pred HHHHHHHHHHHH-HHHHcCCCHHHHH-HHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCce
Confidence 999999999999 5999999999996 69999999999999988764321100 0 010011 12468899998 99
Q ss_pred EEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh--cCCCceEEecCCHHHHHHHHhc-C-CCE
Q 014211 173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY--VDNSAVRVVEGAVAETSALLEQ-K-WDK 248 (429)
Q Consensus 173 v~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a--lP~~~v~~v~~~~~~~~~L~~~-~-v~~ 248 (429)
|++|+|||||+...++++++||++||+||+|||+.+|+++.++.+++.++ +|+|++|+++|+. +. +..+ + ++.
T Consensus 148 v~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~--~~-~~~~~~~~~~ 224 (663)
T TIGR02278 148 AVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA--GD-LLDHLDHRDV 224 (663)
T ss_pred EEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh--HH-HHhcCCCCCE
Confidence 99999999999999999999999999999999999999999999999997 7999999999852 22 3333 4 899
Q ss_pred EEEeCChHHHHHHHHHH--hcccCceeeecCCCCcEEEcCCCC-----HHHHHHHHHHHHHHhcCCCccccccEEEEeCC
Q 014211 249 ILYTGSPRVGRIVMAAA--AKHLTPVILELGGKSPAVVDSTIN-----LQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321 (429)
Q Consensus 249 v~ftGs~~~~~~i~~~~--~~~~~~~~~e~~G~~~~iV~~dad-----l~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~ 321 (429)
|.||||+++|+.|.+.+ +++++|+++|+|||||+||++||| ++.+++.+++++| .|+||.|++++|||||++
T Consensus 225 V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~ 303 (663)
T TIGR02278 225 VAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELT-IKAGQKCTAIRRVIVPKA 303 (663)
T ss_pred EEEECCHHHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHH-hcCCCCccCCceEEEeHH
Confidence 99999999999999874 478999999999999999999999 9999999999999 999999999999999999
Q ss_pred chHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhc-CCEEEeCCccCCCCceEecEEEecCCCCC-
Q 014211 322 FAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDS- 398 (429)
Q Consensus 322 ~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~- 398 (429)
+|++|+++|+++++++++|+|. +++++||++++.+++++.++|+++.. |+++++||..+..|+|++|||+.+++++|
T Consensus 304 i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~ 383 (663)
T TIGR02278 304 LLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAG 383 (663)
T ss_pred HHHHHHHHHHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchh
Confidence 9999999999999999999996 57899999999999999999999864 78999999765568999999999988876
Q ss_pred CccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 399 TIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 399 ~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
.+++||+||||++|++|+|.+|||+++|++
T Consensus 384 ~i~~eE~FGPVl~V~~~~~~~eai~~aN~~ 413 (663)
T TIGR02278 384 AVHATEAFGPVATFFPYGDRAEAARLAARG 413 (663)
T ss_pred hHHhccccCCeEEEEeeCCHHHHHHHHHcC
Confidence 799999999999999999999999999986
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-75 Score=595.03 Aligned_cols=393 Identities=14% Similarity=0.182 Sum_probs=344.1
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHh-hhhcCCCHHHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNY-NSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~-~~w~~~~~~~R~~~L~~~ 98 (429)
-++|||| +|+.+. +.+ +.+.||+||++++. ++. +.+|+++|+++|++|+ +.|+++|+.+|+++|+++
T Consensus 5 ~~~~i~G-~~~~~~-~~~--------~~~~nP~tge~l~~-v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~ 72 (521)
T PRK11903 5 LANYVAG-RWQAGS-GAG--------TPLFDPVTGEELVR-VSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAI 72 (521)
T ss_pred hhhhCCC-EEEcCC-CCe--------eeeECCCCCCEEEE-ecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHH
Confidence 3689999 999864 333 44455599999984 445 8899999999999995 999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccc----cC-CCCcceEEeec-ceE
Q 014211 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSL----TT-YPSSAEIISEP-LGV 172 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~P-~Gv 172 (429)
+++|++++++|++++++|+|||+.+++ .|+..+++.++|++.+.+.+.+........ .. .....++.++| +||
T Consensus 73 a~~l~~~~~ela~~~~~e~Gkp~~~a~-~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GV 151 (521)
T PRK11903 73 VKVLQANRDAYYDIATANSGTTRNDSA-VDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGV 151 (521)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcce
Confidence 999999999999999999999999997 699999999999999887654322111000 00 12234678899 599
Q ss_pred EEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh--cCCCceEEecCCH-HHHHHHHhcCCCEE
Q 014211 173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY--VDNSAVRVVEGAV-AETSALLEQKWDKI 249 (429)
Q Consensus 173 v~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a--lP~~~v~~v~~~~-~~~~~L~~~~v~~v 249 (429)
+++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++|+. +.+..| ..++.|
T Consensus 152 v~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~l--~~v~~v 229 (521)
T PRK11903 152 ALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDHL--QPFDVV 229 (521)
T ss_pred EEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhcc--cCCCEE
Confidence 99999999999999999999999999999999999999999999999987 7999999999843 433333 349999
Q ss_pred EEeCChHHHHHHHHHH--hcccCceeeecCCCCcEEEcCCCC-----HHHHHHHHHHHHHHhcCCCccccccEEEEeCCc
Q 014211 250 LYTGSPRVGRIVMAAA--AKHLTPVILELGGKSPAVVDSTIN-----LQVTTRRIIAGKWMANNGQACIGVDYIITTKDF 322 (429)
Q Consensus 250 ~ftGs~~~~~~i~~~~--~~~~~~~~~e~~G~~~~iV~~dad-----l~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~ 322 (429)
.||||+.+|+.|.+.+ +.+++|+++|+|||||+||++|+| ++.+++.+++++| .|+||.|++++++|||+++
T Consensus 230 ~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~i 308 (521)
T PRK11903 230 SFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMT-VKSGQKCTAIRRIFVPEAL 308 (521)
T ss_pred EEECCHHHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHH-hccCCCccCCeEEEEehhH
Confidence 9999999999999965 478999999999999999999999 5999999999999 9999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccC-------CCCceEecEEEecC
Q 014211 323 APKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD-------EKQLKIAPTILLDV 394 (429)
Q Consensus 323 ~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~-------~~g~~~~Ptvl~~~ 394 (429)
|++|+++|+++++++++|+|. +++++||++++.+++++.++|+....|+++++||... ..|+|++|||+.++
T Consensus 309 ~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~ 388 (521)
T PRK11903 309 YDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGAS 388 (521)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEecc
Confidence 999999999999999999996 5789999999999999999999777789999999641 24789999999876
Q ss_pred CC--CCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 395 PD--DSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 395 ~~--~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++ ++.+++||+||||++|++|+|.+|||+++|++
T Consensus 389 ~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~ 424 (521)
T PRK11903 389 DPDAATAVHDVEVFGPVATLLPYRDAAHALALARRG 424 (521)
T ss_pred CCCccchHHhCcccCCeEEEEeeCCHHHHHHHHhcC
Confidence 54 46889999999999999999999999999975
|
|
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-75 Score=597.13 Aligned_cols=393 Identities=20% Similarity=0.297 Sum_probs=360.8
Q ss_pred ccccceeeecceeeccCCccccccccCCceEeeeCCc-chhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHH
Q 014211 17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQI 95 (429)
Q Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L 95 (429)
...+.-||+| +|. .++.+++++|| +| |++++ .++.++.+|+++++++|++||+.|+.++..+|.++|
T Consensus 30 ~~~~~p~i~g-~~~--~~~~~~~v~~P--------~t~g~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L 97 (518)
T cd07125 30 EWEAIPIING-EET--ETGEGAPVIDP--------ADHERTIG-EVSLADAEDVDAALAIAAAAFAGWSATPVEERAEIL 97 (518)
T ss_pred CcccCceECC-EEe--eCCCeEEEECC--------CCCCceEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 3456778999 998 35655555555 99 99998 777999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEE
Q 014211 96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLV 175 (429)
Q Consensus 96 ~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~ 175 (429)
++++++|++++++|++++++|+|||+.+++ .|+..+++.+++++..++++.+....+. ..+...+..++|+|||++
T Consensus 98 ~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVV~~ 173 (518)
T cd07125 98 EKAADLLEANRGELIALAAAEAGKTLADAD-AEVREAIDFCRYYAAQARELFSDPELPG---PTGELNGLELHGRGVFVC 173 (518)
T ss_pred HHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceeEEEEecccEEEE
Confidence 999999999999999999999999999996 6999999999999999988776542221 234567899999999999
Q ss_pred EcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCH-HHHHHHHhcC-CCEEEEe
Q 014211 176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAV-AETSALLEQK-WDKILYT 252 (429)
Q Consensus 176 i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~-~~~~~L~~~~-v~~v~ft 252 (429)
|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+++|+. +.+..|+.|+ +|.|.||
T Consensus 174 I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ft 253 (518)
T cd07125 174 ISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFT 253 (518)
T ss_pred ECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEE
Confidence 99999999999999999999999999999999999999999999999 9999999999854 4788999996 9999999
Q ss_pred CChHHHHHHHHHHhcc---cCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHH
Q 014211 253 GSPRVGRIVMAAAAKH---LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDS 329 (429)
Q Consensus 253 Gs~~~~~~i~~~~~~~---~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~ 329 (429)
||+.+++.|.+.++++ ++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||++++++|+++
T Consensus 254 Gs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f-~nsGQ~C~a~~rv~V~~~i~d~f~~~ 332 (518)
T cd07125 254 GSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAF-GSAGQRCSALRLLYLQEEIAERFIEM 332 (518)
T ss_pred CCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcchhHHHHHHH
Confidence 9999999999998855 8999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCC-CCceEecEEEecCCCCCCccccCccc
Q 014211 330 LRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFG 407 (429)
Q Consensus 330 l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fg 407 (429)
|++++.++++|+|. +++++||++++.+++++.++++++..++++++||..+. .|+|++|||+.++ +|.+++||+||
T Consensus 333 l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE~Fg 410 (518)
T cd07125 333 LKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTEVFG 410 (518)
T ss_pred HHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCcccC
Confidence 99999999999996 57899999999999999999999877789999987644 6899999999887 89999999999
Q ss_pred cceeeEecC--CHHHHHHHHHhh
Q 014211 408 PLLPIVTVS--IVSSAHFKLKAC 428 (429)
Q Consensus 408 Pv~~v~~~~--~~~eai~l~n~~ 428 (429)
||++|++|+ |.+|||+++|++
T Consensus 411 PVl~v~~~~~~~~deAi~~~n~~ 433 (518)
T cd07125 411 PILHVIRFKAEDLDEAIEDINAT 433 (518)
T ss_pred CeEEEEEeCCCCHHHHHHHHhCC
Confidence 999999999 999999999975
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-75 Score=587.99 Aligned_cols=389 Identities=21% Similarity=0.283 Sum_probs=352.1
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 014211 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 98 (429)
.+.+|||| +|..+ +.+ +...||+||++++ .++.++.+|+++|+++|++|| +.+++.+|.++|+++
T Consensus 3 ~~~~~i~g-~~~~~--~~~--------~~~~~P~t~~~i~-~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~ 67 (472)
T TIGR03250 3 AEALRIAG-EKVSR--DRV--------IEVRYPYNGTVVG-TVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRA 67 (472)
T ss_pred CCCceECC-EEecC--CCe--------EEeECCCCCCEEE-EEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHH
Confidence 36789999 99864 333 4555559999998 677999999999999999886 478999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCccc-ccccCCCCcceEEeecc-eEEEEE
Q 014211 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAK-TSLTTYPSSAEIISEPL-GVVLVI 176 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~-Gvv~~i 176 (429)
+++|++++++|++++++|+|||..++. .|+..+++.++|++..+.++.+..... ......+...++.++|+ |||++|
T Consensus 68 a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I 146 (472)
T TIGR03250 68 AALLAARKEEISDLITLESGLSKKDSL-YEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAI 146 (472)
T ss_pred HHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEE
Confidence 999999999999999999999999996 699999999999999887765432211 00111233567899998 999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeC
Q 014211 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftG 253 (429)
+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|+++| +.+.+..|++|+ ++.|.|||
T Consensus 147 ~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTG 226 (472)
T TIGR03250 147 TPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTG 226 (472)
T ss_pred cCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCCCCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999998 467889999996 99999999
Q ss_pred ChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014211 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 254 s~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
|+.+|+.+.+.++ ++|+++|+|||||+||++|+|++.|++.+++++| .|+||.|+++++||||++++++|+++|+++
T Consensus 227 s~~~g~~i~~~a~--~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 303 (472)
T TIGR03250 227 GVAIGKYIAARAG--YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSY-KNSGQRCTAVKRMLVQESVADRFTELLVEK 303 (472)
T ss_pred cHHHHHHHHHHhc--CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-HhhCCCCCCCcEEEEeHhHHHHHHHHHHHH
Confidence 9999999998875 6899999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCcccccee
Q 014211 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~ 411 (429)
+++++.|+|. +++++||++++.+++++.++++++. .|+++++||.. .|+|++|||+.+++++|.+++||+||||++
T Consensus 304 ~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~--~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~ 381 (472)
T TIGR03250 304 TRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR--DGALYAPTVLDRVDPSMTLVREETFGPVSP 381 (472)
T ss_pred HHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc--CCEEEcCEEEeCCCCCChHHhCCCcCCeEE
Confidence 9999999996 5789999999999999999999986 57799999865 589999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHhh
Q 014211 412 IVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 412 v~~~~~~~eai~l~n~~ 428 (429)
|++|+|.+||++++|++
T Consensus 382 v~~~~~~~eai~~aN~~ 398 (472)
T TIGR03250 382 VIRFCDIDDAIRISNST 398 (472)
T ss_pred EEEeCCHHHHHHHHhCC
Confidence 99999999999999975
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-75 Score=588.14 Aligned_cols=373 Identities=21% Similarity=0.323 Sum_probs=345.1
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhh
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE 128 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 128 (429)
+||+||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..++. .|
T Consensus 2 ~~p~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~e 79 (456)
T cd07107 2 INPATGQVLA-RVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAML-GD 79 (456)
T ss_pred cCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HH
Confidence 4669999998 667999999999999999999999999999999999999999999999999999999999999985 79
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCC
Q 014211 129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA 208 (429)
Q Consensus 129 v~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~ 208 (429)
+..+++.+++++...+...+ ..... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~l~~~a~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~ 155 (456)
T cd07107 80 VMVAAALLDYFAGLVTELKG-ETIPV---GGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQA 155 (456)
T ss_pred HHHHHHHHHHHHHHHHHhCC-ccccC---CCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCC
Confidence 99999999999987655433 22211 123456889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhcCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcC
Q 014211 209 PATSSLLAKLLEDYVDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286 (429)
Q Consensus 209 ~~~~~~l~~~l~~alP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~ 286 (429)
|.++.++++++.+++|+|+||+++|+ .+.+..|++|+ ++.|.||||+++|+.|.+.++++++|+++|+|||||+||++
T Consensus 156 p~~~~~l~~~~~~~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~ 235 (456)
T cd07107 156 PLSALRLAELAREVLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFP 235 (456)
T ss_pred hHHHHHHHHHHHHhCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECC
Confidence 99999999999999999999999984 45789999997 99999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHH-HHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHH
Q 014211 287 TINLQVTTRRIIAGK-WMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLL 364 (429)
Q Consensus 287 dadl~~aa~~i~~~~-~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i 364 (429)
|+|++.|++.+++++ | .++||.|+++++||||+++|++|+++|+++++++++|+|. +++++||++++.+++++.++|
T Consensus 236 dadl~~Aa~~i~~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i 314 (456)
T cd07107 236 DADPEAAADAAVAGMNF-TWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYI 314 (456)
T ss_pred CCCHHHHHHHHHHhchh-hcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHH
Confidence 999999999999995 8 8999999999999999999999999999999999999996 578999999999999999999
Q ss_pred Hhhh-cCCEEEeCCccC-----CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 365 DEDK-VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 365 ~~a~-~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++. .|+++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|++
T Consensus 315 ~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~ 384 (456)
T cd07107 315 DSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGV 384 (456)
T ss_pred HHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCC
Confidence 9885 577999999652 258999999999999999999999999999999999999999999975
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-75 Score=586.83 Aligned_cols=378 Identities=24% Similarity=0.372 Sum_probs=350.5
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhc-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHh
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRK-TKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFIS 127 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ 127 (429)
+||+||++++ .++.++.+|+++++++|++||+.|+ ++|+.+|.++|++++++|+++.++|++++++|+|||..++...
T Consensus 2 ~~P~tg~~i~-~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 80 (459)
T cd07089 2 INPATEEVIG-TAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM 80 (459)
T ss_pred cCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 4669999998 6789999999999999999999999 9999999999999999999999999999999999999877656
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCccccc-ccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCC
Q 014211 128 EISMTKSSCKLALKELKYWTKPEKAKTS-LTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE 206 (429)
Q Consensus 128 ev~~a~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~ 206 (429)
|+..+++.+++++..++++.+....... ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 160 (459)
T cd07089 81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP 160 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 9999999999999999887655432211 011245678999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEE
Q 014211 207 IAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283 (429)
Q Consensus 207 ~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~i 283 (429)
.+|.++..+.+++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+.+|+.|.+.++++++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n~~i 240 (459)
T cd07089 161 DTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKSANI 240 (459)
T ss_pred CChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCeeE
Confidence 9999999999999999 99999999999 455789999996 99999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHh
Q 014211 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLAS 362 (429)
Q Consensus 284 V~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~ 362 (429)
|++|+|++.+++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||+++..+.+++.+
T Consensus 241 V~~dadl~~aa~~i~~~~~-~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~ 319 (459)
T cd07089 241 VLDDADLAAAAPAAVGVCM-HNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEG 319 (459)
T ss_pred ECCCCCHHHHHHHHHHHHH-HhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999999999999999999999996 5789999999999999999
Q ss_pred HHHhhh-cCCEEEeCCccCC---CCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 363 LLDEDK-VSDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 363 ~i~~a~-~~~~vl~gg~~~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++++ .|+++++||..+. .|+|++|||+.+++++|.+++||+||||++|++|+|.||||+++|++
T Consensus 320 ~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~ 389 (459)
T cd07089 320 YIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDS 389 (459)
T ss_pred HHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCC
Confidence 999886 5789999997643 68999999999999999999999999999999999999999999975
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-75 Score=583.44 Aligned_cols=365 Identities=52% Similarity=0.880 Sum_probs=340.4
Q ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHH
Q 014211 63 RFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142 (429)
Q Consensus 63 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~ 142 (429)
++..+|+++|+++|++||+.|+.+++.+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.+++++..
T Consensus 2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~ 81 (484)
T PLN02203 2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN 81 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999657999999999999999
Q ss_pred HHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh
Q 014211 143 LKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY 222 (429)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a 222 (429)
++++.+......+....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++.+++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~ 161 (484)
T PLN02203 82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY 161 (484)
T ss_pred HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh
Confidence 99887654221111123456789999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcC---CCCHHHHHHHHHH
Q 014211 223 VDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS---TINLQVTTRRIIA 299 (429)
Q Consensus 223 lP~~~v~~v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~---dadl~~aa~~i~~ 299 (429)
+|+|+||+++|+.+.+..|+.|++|.|.||||+++|+.|.+.++++++|+++|+|||||+||++ |+|++.+++.+++
T Consensus 162 lP~gvv~vv~g~~~~~~~l~~~~vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~ 241 (484)
T PLN02203 162 LDSKAVKVIEGGPAVGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVG 241 (484)
T ss_pred CCcCEEEEEeCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHH
Confidence 9999999999987889999999999999999999999999999999999999999999999997 6999999999999
Q ss_pred HHHHh-cCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCc
Q 014211 300 GKWMA-NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQ 378 (429)
Q Consensus 300 ~~~~~-~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~ 378 (429)
++| . |+||.|++++|+|||++++++|+++|++++.++++|+|.+.+++||++++.+++++.++|+++..++++++||.
T Consensus 242 ~~f-~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~~~~~~gg~ 320 (484)
T PLN02203 242 GKW-GSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHGGS 320 (484)
T ss_pred Hhc-ccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHHHhCCeEEeCCC
Confidence 999 8 79999999999999999999999999999999999999877899999999999999999999876688999997
Q ss_pred cCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 379 RDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 379 ~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
.+..|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|++
T Consensus 321 ~~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~ 370 (484)
T PLN02203 321 IDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSK 370 (484)
T ss_pred cCCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCC
Confidence 65568999999999999999999999999999999999999999999975
|
|
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-75 Score=586.79 Aligned_cols=377 Identities=29% Similarity=0.420 Sum_probs=348.9
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhh
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE 128 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 128 (429)
+||.||++++ .++.++.+|+++++++|++||+.|+++++.+|.++|+++++.|++++++|++++++|+||+..++. .|
T Consensus 2 ~~P~t~~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~e 79 (456)
T cd07110 2 INPATEATIG-EIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAA-WD 79 (456)
T ss_pred cCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence 4669999999 677999999999999999999999999999999999999999999999999999999999999996 59
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCC
Q 014211 129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA 208 (429)
Q Consensus 129 v~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~ 208 (429)
+..+++.+++++...+++.+...........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~ 159 (456)
T cd07110 80 VDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELT 159 (456)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccc
Confidence 99999999999999987743211111111124457889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEc
Q 014211 209 PATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285 (429)
Q Consensus 209 ~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~ 285 (429)
|+++..+.+++.++ +|+|+||+++| +.+.+..|+.|+ ++.|.||||+.+|+.|.+.++++++|+++|+|||||+||+
T Consensus 160 p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~iV~ 239 (456)
T cd07110 160 SLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPIIVF 239 (456)
T ss_pred hHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeEEC
Confidence 99999999999999 99999999998 456789999997 9999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHH
Q 014211 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLL 364 (429)
Q Consensus 286 ~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i 364 (429)
+|+|++.|++.+++++| +++||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+++
T Consensus 240 ~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v 318 (456)
T cd07110 240 DDADLEKAVEWAMFGCF-WNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFI 318 (456)
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999996 578999999999999999999
Q ss_pred Hhhh-cCCEEEeCCccC---CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 365 DEDK-VSDKIVYGGQRD---EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 365 ~~a~-~~~~vl~gg~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++. .|+++++||..+ ..|+|++|||+.+++++|.++++|+||||++|++|+|.+|||+++|++
T Consensus 319 ~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~ 386 (456)
T cd07110 319 ARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDS 386 (456)
T ss_pred HHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCC
Confidence 9886 577999999764 358899999999999999999999999999999999999999999975
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-75 Score=585.98 Aligned_cols=376 Identities=28% Similarity=0.409 Sum_probs=346.7
Q ss_pred eeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHh
Q 014211 48 CRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFIS 127 (429)
Q Consensus 48 ~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ 127 (429)
++||+||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..+++ .
T Consensus 3 ~~~P~t~~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ 80 (456)
T cd07145 3 VRNPANGEVID-TVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSR-V 80 (456)
T ss_pred ccCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-H
Confidence 34569999998 677999999999999999999999999999999999999999999999999999999999999997 5
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCcccccc--cCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCC
Q 014211 128 EISMTKSSCKLALKELKYWTKPEKAKTSL--TTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 205 (429)
Q Consensus 128 ev~~a~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps 205 (429)
|+..+++.+++++...+.+.+.. ..... ...+...+..++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps 159 (456)
T cd07145 81 EVERTIRLFKLAAEEAKVLRGET-IPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPS 159 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcc-ccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECC
Confidence 99999999999998876543322 11110 0123456788999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcE
Q 014211 206 EIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282 (429)
Q Consensus 206 ~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~ 282 (429)
+.+|.++.++.+++.++ +|+|++|+++| +.+.++.|++|+ ++.|.||||+++|+.|.+.++++++|+++|+|||||+
T Consensus 160 ~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n~~ 239 (456)
T cd07145 160 SNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSDPM 239 (456)
T ss_pred ccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCCee
Confidence 99999999999999998 99999999998 567788999997 9999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHH
Q 014211 283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLA 361 (429)
Q Consensus 283 iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~ 361 (429)
||++|+|++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.
T Consensus 240 iV~~dAdl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~ 318 (456)
T cd07145 240 IVLKDADLERAVSIAVRGRF-ENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERME 318 (456)
T ss_pred EECCCCCHHHHHHHHHHHHH-hccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHH
Confidence 99999999999999999999 9999999999999999999999999999999999999996 588999999999999999
Q ss_pred hHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 362 SLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 362 ~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++++. .|+++++||..+. |+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|++
T Consensus 319 ~~i~~a~~~ga~vl~gg~~~~-g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~ 385 (456)
T cd07145 319 NLVNDAVEKGGKILYGGKRDE-GSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANST 385 (456)
T ss_pred HHHHHHHHCCCEEEeCCCCCC-CeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCC
Confidence 9999986 4789999997643 8999999999999999999999999999999999999999999874
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-74 Score=583.70 Aligned_cols=362 Identities=47% Similarity=0.780 Sum_probs=339.8
Q ss_pred CCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHH
Q 014211 64 FDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL 143 (429)
Q Consensus 64 ~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~ 143 (429)
.+.+|+++++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+||+..++...|+..+++.+++++..+
T Consensus 4 ~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~~ 83 (493)
T PTZ00381 4 DNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHL 83 (493)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999997779999999999999999
Q ss_pred HhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhc
Q 014211 144 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYV 223 (429)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~al 223 (429)
++|++...........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++.+++.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~l 163 (493)
T PTZ00381 84 DEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKYL 163 (493)
T ss_pred HHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhC
Confidence 99987664332211234567899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHH
Q 014211 224 DNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303 (429)
Q Consensus 224 P~~~v~~v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~ 303 (429)
|++++++++|+.+.+..|+++++|.|.||||+.+|+.|.++++++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 164 p~~~v~vv~g~~~~~~~l~~~~~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~- 242 (493)
T PTZ00381 164 DPSYVRVIEGGVEVTTELLKEPFDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKF- 242 (493)
T ss_pred CcCEEEEecCCHHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-
Confidence 9999999999888889999988999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCCCC
Q 014211 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ 383 (429)
Q Consensus 304 ~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~~g 383 (429)
.|+||.|++++++|||++++++|+++|++.++++.++++++++++||+++..+.+++.++++ ..++++++||..+..|
T Consensus 243 ~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~--~~ga~~~~gG~~~~~~ 320 (493)
T PTZ00381 243 LNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIK--DHGGKVVYGGEVDIEN 320 (493)
T ss_pred hhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHH--hCCCcEEECCCcCCCC
Confidence 99999999999999999999999999999999998666677899999999999999999997 3578999999876678
Q ss_pred ceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 384 LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 384 ~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|++
T Consensus 321 ~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~ 365 (493)
T PTZ00381 321 KYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSR 365 (493)
T ss_pred CeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999975
|
|
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-74 Score=582.98 Aligned_cols=376 Identities=22% Similarity=0.352 Sum_probs=346.4
Q ss_pred eeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhh-hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhH
Q 014211 48 CRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS-RKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI 126 (429)
Q Consensus 48 ~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 126 (429)
+.||.||++++ .++.++.+|+++|+++|++||+. |+.++..+|.++|++++++|++++++|++++++|+|||..++.
T Consensus 3 ~~~P~t~~~i~-~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~- 80 (455)
T cd07148 3 VVNPFDLKPIG-EVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAK- 80 (455)
T ss_pred ccCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence 35669999998 77799999999999999999998 5679999999999999999999999999999999999999997
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCccccc-ccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCC
Q 014211 127 SEISMTKSSCKLALKELKYWTKPEKAKTS-LTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 205 (429)
Q Consensus 127 ~ev~~a~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps 205 (429)
.|+..+++.+++++..++++.+....... ....+...+..++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 81 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps 160 (455)
T cd07148 81 VEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPA 160 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCC
Confidence 69999999999999999887654322110 11123456889999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEE
Q 014211 206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283 (429)
Q Consensus 206 ~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~i 283 (429)
+.+|.++.++.+++.++ +|+|++|+++|+.+.+..|+.|+ +|.|.||||+++|+.|.+.++. .+|+++|+|||||+|
T Consensus 161 ~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~~p~i 239 (455)
T cd07148 161 LATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGAAPVI 239 (455)
T ss_pred CcccHHHHHHHHHHHHcCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCCCceE
Confidence 99999999999999999 99999999998777889999996 9999999999999999999876 489999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHh
Q 014211 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLAS 362 (429)
Q Consensus 284 V~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~ 362 (429)
|++|+|++.|++.+++++| +++||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+
T Consensus 240 V~~dADl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~ 318 (455)
T cd07148 240 VDRSADLDAMIPPLVKGGF-YHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEE 318 (455)
T ss_pred ECCCCCHHHHHHHHHHHHH-hcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999999999999999999999996 5789999999999999999
Q ss_pred HHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 363 LLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 363 ~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++++. .|+++++||..+ .|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 319 ~i~~a~~~Ga~vl~gg~~~-~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~ 384 (455)
T cd07148 319 WVNEAVAAGARLLCGGKRL-SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSL 384 (455)
T ss_pred HHHHHHhCCCEEEeCCccC-CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCC
Confidence 999986 477999998764 47899999999999999999999999999999999999999999975
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-74 Score=584.70 Aligned_cols=376 Identities=30% Similarity=0.425 Sum_probs=351.3
Q ss_pred eCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhH
Q 014211 50 CSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEI 129 (429)
Q Consensus 50 ~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev 129 (429)
||+||++++ .++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++++++|++++++|+||+..++. .|+
T Consensus 2 ~P~t~~~~~-~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ev 79 (453)
T cd07099 2 NPATGEVLG-EVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAG-LEV 79 (453)
T ss_pred CCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHH
Confidence 679999999 777999999999999999999999999999999999999999999999999999999999999885 699
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCCh
Q 014211 130 SMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAP 209 (429)
Q Consensus 130 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~ 209 (429)
..+++.+++++..+.++.+...........+...+++++|+||+++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p 159 (453)
T cd07099 80 LLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTP 159 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence 99999999999999888765432211112355678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCC
Q 014211 210 ATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTI 288 (429)
Q Consensus 210 ~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~da 288 (429)
.++..+++++.++ +|+|++|+++|+.+.+..|++|++|.|.||||+++|+.|.+.++++++|+++|+|||||+||++|+
T Consensus 160 ~~~~~l~~~l~~ag~P~g~~~vv~g~~~~~~~l~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~da 239 (453)
T cd07099 160 LVGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDAGVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIVLADA 239 (453)
T ss_pred HHHHHHHHHHHHcCCCCCeEEEEeCCchHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEECCCC
Confidence 9999999999999 999999999996678888998889999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhh
Q 014211 289 NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDED 367 (429)
Q Consensus 289 dl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a 367 (429)
|++.|++.+++++| .++||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++++++
T Consensus 240 dl~~a~~~i~~~~~-~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a 318 (453)
T cd07099 240 DLERAAAAAVWGAM-VNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDA 318 (453)
T ss_pred CHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999996 688999999999999999999998
Q ss_pred h-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 368 K-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 368 ~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
. .|+++++||... ..|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 319 ~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~ 381 (453)
T cd07099 319 VAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDS 381 (453)
T ss_pred HhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCC
Confidence 5 577999999764 468999999999999999999999999999999999999999999975
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-74 Score=584.18 Aligned_cols=373 Identities=27% Similarity=0.364 Sum_probs=348.8
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhc-CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHh
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRK-TKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFIS 127 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ 127 (429)
.||+||++++ .++.++.+|+++++++|++||+.|. .+|..+|.++|+++++.|++++++|++++++|+|||..+++ .
T Consensus 2 ~~P~tg~~i~-~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ 79 (454)
T cd07109 2 FDPSTGEVFA-RIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQAR-A 79 (454)
T ss_pred cCCCCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-H
Confidence 3569999998 7779999999999999999999876 99999999999999999999999999999999999999997 6
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCC
Q 014211 128 EISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEI 207 (429)
Q Consensus 128 ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~ 207 (429)
|+..+++.+++++...+++.+.... ...+...+..++|+||+++|+|||||+...++++++||++||+||+|||+.
T Consensus 80 ev~~~~~~l~~~~~~~~~~~g~~~~----~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~ 155 (454)
T cd07109 80 DVEAAARYFEYYGGAADKLHGETIP----LGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAED 155 (454)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccc----cCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 9999999999999988776543321 113456789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEE
Q 014211 208 APATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284 (429)
Q Consensus 208 ~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV 284 (429)
+|.++..+.+++.++ +|+|++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||
T Consensus 156 ~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV 235 (454)
T cd07109 156 APLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIV 235 (454)
T ss_pred ChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEE
Confidence 999999999999998 99999999998 677889999997 999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHH
Q 014211 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLL 364 (429)
Q Consensus 285 ~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i 364 (429)
++|+|++.|++.+++++| +++||.|+++++||||++++++|+++|+++++++++|+|.+++++||++++.+++++.++|
T Consensus 236 ~~daDl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~gpli~~~~~~~~~~~i 314 (454)
T cd07109 236 FADADLEAALPVVVNAII-QNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLEDPDLGPLISAKQLDRVEGFV 314 (454)
T ss_pred CCCCCHHHHHHHHHHHHH-hccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcccCcCCCccCHHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999998788999999999999999999
Q ss_pred Hhhh-cCCEEEeCCccC----CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 365 DEDK-VSDKIVYGGQRD----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 365 ~~a~-~~~~vl~gg~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++. .|+++++||... ..|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 315 ~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~ 383 (454)
T cd07109 315 ARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGT 383 (454)
T ss_pred HHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCC
Confidence 9986 577999998753 258999999999999999999999999999999999999999999975
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-74 Score=589.95 Aligned_cols=392 Identities=22% Similarity=0.343 Sum_probs=356.0
Q ss_pred ceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHH
Q 014211 21 KSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN 100 (429)
Q Consensus 21 ~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~ 100 (429)
+..|.| ..+.++++++++| |.||++++ .++.++.+|+++++++|++|++.|++++..+|.++|+++++
T Consensus 20 ~~~~~~---~~~~~~~~~~v~n--------P~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~ 87 (524)
T PRK09407 20 RRLTAR---VDGAAGPTREVTA--------PFTGEPLA-TVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHD 87 (524)
T ss_pred HHHHhh---cCCCCCCEEEeEC--------CCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 445666 3334454455544 49999998 67799999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCc
Q 014211 101 MIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWN 180 (429)
Q Consensus 101 ~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n 180 (429)
.|++++++|++++++|+|||..++. .|+..+++.+++++..++++.+.+...... ......+..++|+|||++|+|||
T Consensus 88 ~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~P~N 165 (524)
T PRK09407 88 LVLENREELLDLVQLETGKARRHAF-EEVLDVALTARYYARRAPKLLAPRRRAGAL-PVLTKTTELRQPKGVVGVISPWN 165 (524)
T ss_pred HHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccccC-CCCceEEEEEecceEEEEEeCCC
Confidence 9999999999999999999999985 699999999999999998887655322111 11245788999999999999999
Q ss_pred hhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcCCCEEEEeCChHHH
Q 014211 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQKWDKILYTGSPRVG 258 (429)
Q Consensus 181 ~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~v~~v~ftGs~~~~ 258 (429)
||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++| +.+.++.|+.| ++.|.||||+++|
T Consensus 166 ~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~-~d~V~fTGs~~~g 244 (524)
T PRK09407 166 YPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN-ADYLMFTGSTATG 244 (524)
T ss_pred ChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc-CCEEEEECCHHHH
Confidence 999999999999999999999999999999999999999999 99999999998 55678888876 7999999999999
Q ss_pred HHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhh
Q 014211 259 RIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF 338 (429)
Q Consensus 259 ~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~ 338 (429)
+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||+++|++|+++|++++++++
T Consensus 245 ~~v~~~aa~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f-~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~ 323 (524)
T PRK09407 245 RVLAEQAGRRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACF-SNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMR 323 (524)
T ss_pred HHHHHHHHhcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC--CCCceEecEEEecCCCCCCccccCccccceeeEe
Q 014211 339 GKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD--EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVT 414 (429)
Q Consensus 339 ~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~ 414 (429)
+|+|. +++++||++++.+++++.++++++. .|+++++||... ..|+|++|||+.+++++|.+++||+||||++|++
T Consensus 324 ~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~ 403 (524)
T PRK09407 324 LGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYP 403 (524)
T ss_pred CCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEe
Confidence 99986 5889999999999999999999986 578999998742 2479999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHhh
Q 014211 415 VSIVSSAHFKLKAC 428 (429)
Q Consensus 415 ~~~~~eai~l~n~~ 428 (429)
|+|.+|||+++|++
T Consensus 404 ~~~~deai~~~N~~ 417 (524)
T PRK09407 404 VADVDEAVERANDT 417 (524)
T ss_pred eCCHHHHHHHHhCC
Confidence 99999999999975
|
|
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-75 Score=606.45 Aligned_cols=391 Identities=16% Similarity=0.245 Sum_probs=344.3
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHH-hhhhcCCCHHHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN-YNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A-~~~w~~~~~~~R~~~L~~~ 98 (429)
.++|||| +|+.+ ++.+++++|| +||++++ .++.++ +|+++||++|++| |+.|+++++.+|+++|+++
T Consensus 5 ~~~~i~G-~~~~~-~~~~~~~~nP--------~tg~~i~-~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~ 72 (675)
T PRK11563 5 LQSYVAG-RWQTG-QGEGRPLHDA--------VTGEPVA-RVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKAL 72 (675)
T ss_pred ccceecC-EEEcC-CCCceeccCC--------CCCCEEE-EEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHH
Confidence 4689999 99987 4545555555 9999998 555676 6999999999998 7999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcc----c-ccccCCC-CcceEEeecc-e
Q 014211 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKA----K-TSLTTYP-SSAEIISEPL-G 171 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~----~-~~~~~~~-~~~~~~~~P~-G 171 (429)
+++|++++++|++ +++|+|||+.+++ .|+..+++.++|++..+++....... . .+....+ ...++.++|+ |
T Consensus 73 a~~l~~~~~ela~-l~~e~GK~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~G 150 (675)
T PRK11563 73 AKYLLERKEELYA-LSAQTGATRRDSW-IDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEG 150 (675)
T ss_pred HHHHHHhHHHHHH-HHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCc
Confidence 9999999999999 5999999999997 59999999999999988765421110 0 0000111 2257889997 9
Q ss_pred EEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh--cCCCceEEecCCHHHHHHHHhc-C-CC
Q 014211 172 VVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY--VDNSAVRVVEGAVAETSALLEQ-K-WD 247 (429)
Q Consensus 172 vv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a--lP~~~v~~v~~~~~~~~~L~~~-~-v~ 247 (429)
||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++ +|+|++|+++|+.. . +..+ + ++
T Consensus 151 Vv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~--~-~~~~~~~i~ 227 (675)
T PRK11563 151 VAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG--D-LLDHLDGQD 227 (675)
T ss_pred eEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH--H-HhhcCCCCC
Confidence 999999999999999999999999999999999999999999999999997 89999999998522 2 4443 4 89
Q ss_pred EEEEeCChHHHHHHHHH--HhcccCceeeecCCCCcEEEcCCCC-----HHHHHHHHHHHHHHhcCCCccccccEEEEeC
Q 014211 248 KILYTGSPRVGRIVMAA--AAKHLTPVILELGGKSPAVVDSTIN-----LQVTTRRIIAGKWMANNGQACIGVDYIITTK 320 (429)
Q Consensus 248 ~v~ftGs~~~~~~i~~~--~~~~~~~~~~e~~G~~~~iV~~dad-----l~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~ 320 (429)
.|.||||+++|+.|.+. ++.+++|+++|+|||||+||++||| ++.+++.+++++| .|+||.|++++|+|||+
T Consensus 228 ~v~FTGS~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f-~~aGQ~C~a~~rv~V~~ 306 (675)
T PRK11563 228 VVTFTGSAATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMT-VKAGQKCTAIRRAIVPR 306 (675)
T ss_pred EEEEECcHHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHH-HhCCCccccceeEEeeH
Confidence 99999999999999985 4488999999999999999999995 9999999999999 99999999999999999
Q ss_pred CchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccC--------CCCceEecEEE
Q 014211 321 DFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD--------EKQLKIAPTIL 391 (429)
Q Consensus 321 ~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~--------~~g~~~~Ptvl 391 (429)
++|++|+++|+++++++++|+|. +++++||++++.+++++.++|+++...+++++||... ..|+|++|||+
T Consensus 307 ~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl 386 (675)
T PRK11563 307 ALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLL 386 (675)
T ss_pred HHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCCeeECCEEE
Confidence 99999999999999999999996 5789999999999999999999997669999999531 25899999999
Q ss_pred ecCCC--CCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 392 LDVPD--DSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 392 ~~~~~--~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
.++++ ++.+++||+||||++|++|+|.+|||+++|++
T Consensus 387 ~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s 425 (675)
T PRK11563 387 YCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARG 425 (675)
T ss_pred eccCchhhhhHhhccccCCceEEEecCCHHHHHHHHhcC
Confidence 99988 57999999999999999999999999999986
|
|
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-74 Score=582.22 Aligned_cols=374 Identities=22% Similarity=0.364 Sum_probs=347.5
Q ss_pred eCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhH
Q 014211 50 CSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEI 129 (429)
Q Consensus 50 ~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev 129 (429)
||.||++++ .++.++.+|+++|+++|++||+.|++++..+|.++|++++++|++++++|++++++|+||+..++. .|+
T Consensus 2 ~P~tg~~i~-~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev 79 (454)
T cd07101 2 APFTGEPLG-ELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAF-EEV 79 (454)
T ss_pred cCCCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHH-HHH
Confidence 679999999 788999999999999999999999999999999999999999999999999999999999999995 799
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCCh
Q 014211 130 SMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAP 209 (429)
Q Consensus 130 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~ 209 (429)
..+++.+++++..+.++.++....... ......+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p 158 (454)
T cd07101 80 LDVAIVARYYARRAERLLKPRRRRGAI-PVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTA 158 (454)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccC-CCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccch
Confidence 999999999999998887655322111 1134568899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCC
Q 014211 210 ATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDST 287 (429)
Q Consensus 210 ~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~d 287 (429)
.++..+.+++.++ +|+|++|+++| +.+.+..|++| ++.|.||||+++|+.|.+.++++++|+++|+|||||+||++|
T Consensus 159 ~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~-~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~d 237 (454)
T cd07101 159 LTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN-ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVLED 237 (454)
T ss_pred HHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEECCC
Confidence 9999999999999 99999999999 55678888876 689999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHh
Q 014211 288 INLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDE 366 (429)
Q Consensus 288 adl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 366 (429)
||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++++++++|+|. +++++||++++.+++++.+++++
T Consensus 238 Adl~~a~~~i~~~~~-~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~ 316 (454)
T cd07101 238 ADLDKAAAGAVRACF-SNAGQLCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDD 316 (454)
T ss_pred CCHHHHHHHHHHHHH-hcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999986 58899999999999999999999
Q ss_pred hh-cCCEEEeCCccC--CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 367 DK-VSDKIVYGGQRD--EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 367 a~-~~~~vl~gg~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+. .|+++++||... ..|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 317 a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~ 381 (454)
T cd07101 317 AVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDT 381 (454)
T ss_pred HHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCC
Confidence 86 577999998642 247899999999999999999999999999999999999999999975
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-74 Score=579.61 Aligned_cols=372 Identities=23% Similarity=0.292 Sum_probs=345.5
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhH
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS--RKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI 126 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 126 (429)
.||+||++++ .++.++.+|+++||++|++||+. |+. ++.+|.++|++++++|++++++|++++++|+|||..+++
T Consensus 2 ~nP~t~~~i~-~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~- 78 (455)
T cd07120 2 IDPATGEVIG-TYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEAR- 78 (455)
T ss_pred cCCCCCCEEE-EEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence 4679999998 77799999999999999999985 998 999999999999999999999999999999999999997
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCC
Q 014211 127 SEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE 206 (429)
Q Consensus 127 ~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~ 206 (429)
.|+..+++.+++++...++..+.... ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 79 ~Ev~~~i~~l~~~~~~~~~~~g~~~~----~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 154 (455)
T cd07120 79 FEISGAISELRYYAGLARTEAGRMIE----PEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAG 154 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccc----cCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCC
Confidence 69999999999999988875443221 11245678999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhh-h-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcE
Q 014211 207 IAPATSSLLAKLLED-Y-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282 (429)
Q Consensus 207 ~~~~~~~~l~~~l~~-a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~ 282 (429)
.+|.++..+++++.+ + +|+|++|+++| +.+.+..|++|+ ++.|.||||+++|+.|.+.++++++|+++|+|||||+
T Consensus 155 ~~~~~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~ 234 (455)
T cd07120 155 QTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPC 234 (455)
T ss_pred CChHHHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCee
Confidence 999999999999999 6 99999999998 566789999997 9999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHH
Q 014211 283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLA 361 (429)
Q Consensus 283 iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~ 361 (429)
||++|+|++.+++.+++++| .++||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.
T Consensus 235 IV~~daDl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~ 313 (455)
T cd07120 235 IVFDDADLDAALPKLERALT-IFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVD 313 (455)
T ss_pred EECCCCCHHHHHHHHHHHHH-HhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHH
Confidence 99999999999999999999 9999999999999999999999999999999999999995 688999999999999999
Q ss_pred hHHHhhh-cCCEEEeCCcc-CC---CCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 362 SLLDEDK-VSDKIVYGGQR-DE---KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 362 ~~i~~a~-~~~~vl~gg~~-~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++++. .|+++++||.. +. .|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 314 ~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~ 385 (455)
T cd07120 314 RMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDT 385 (455)
T ss_pred HHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCC
Confidence 9999986 57789987754 32 58999999999999999999999999999999999999999999975
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-74 Score=580.34 Aligned_cols=371 Identities=26% Similarity=0.376 Sum_probs=345.2
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhh
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE 128 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 128 (429)
+||.||++++ .++.++.+|+++++++|++||+.|++++..+|.++|++++++|++++++|++++++|+|||..++. .|
T Consensus 2 ~~P~tg~~~~-~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~e 79 (446)
T cd07106 2 INPATGEVFA-SAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQ-FE 79 (446)
T ss_pred cCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence 4669999998 667999999999999999999999999999999999999999999999999999999999999996 59
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCC
Q 014211 129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA 208 (429)
Q Consensus 129 v~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~ 208 (429)
+..+++.+++++..... ..... ...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~l~~~~~~~~~---~~~~~---~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~ 153 (446)
T cd07106 80 VGGAVAWLRYTASLDLP---DEVIE---DDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFT 153 (446)
T ss_pred HHHHHHHHHHHHhhhhc---Ccccc---CCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 99999999999876521 11111 1134567899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhcCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCC
Q 014211 209 PATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDST 287 (429)
Q Consensus 209 ~~~~~~l~~~l~~alP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~d 287 (429)
|.++..+++++.+++|+|++|+++|+.+.+..|++|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|
T Consensus 154 p~~~~~l~~~~~~~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~d 233 (446)
T cd07106 154 PLCTLKLGELAQEVLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLPD 233 (446)
T ss_pred hHHHHHHHHHHHHhCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECCC
Confidence 9999999999999999999999999777888999997 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHh
Q 014211 288 INLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDE 366 (429)
Q Consensus 288 adl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 366 (429)
||++.|++.+++++| +++||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+++++
T Consensus 234 ADl~~aa~~iv~~~~-~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~ 312 (446)
T cd07106 234 VDIDAVAPKLFWGAF-INSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVED 312 (446)
T ss_pred CCHHHHHHHHHHHHH-HhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999996 58899999999999999999998
Q ss_pred hh-cCCEEEeCCccCC-CCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 367 DK-VSDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 367 a~-~~~~vl~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+. .|+++++||..+. .|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 313 a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~ 376 (446)
T cd07106 313 AKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDS 376 (446)
T ss_pred HHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCC
Confidence 86 5789999997643 58899999999999999999999999999999999999999999975
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-74 Score=581.22 Aligned_cols=374 Identities=26% Similarity=0.405 Sum_probs=346.5
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhh--hcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhH
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNS--RKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI 126 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 126 (429)
.||+||++++ .++.++.+|+++|+++|++||+. |+++|..+|.++|++++++|++++++|++++++|+|||+.+++
T Consensus 2 ~~P~t~~~i~-~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~- 79 (454)
T cd07118 2 RSPAHGVVVA-RYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQAR- 79 (454)
T ss_pred CCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-
Confidence 3669999999 67799999999999999999985 9999999999999999999999999999999999999999996
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCC
Q 014211 127 SEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE 206 (429)
Q Consensus 127 ~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~ 206 (429)
.|+..+++.+++++...+.+.+..... ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 80 ~ev~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~ 156 (454)
T cd07118 80 GEIEGAADLWRYAASLARTLHGDSYNN---LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSE 156 (454)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccccc---CCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCC
Confidence 799999999999998766544322111 11234567899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEE
Q 014211 207 IAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283 (429)
Q Consensus 207 ~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~i 283 (429)
.+|.++..+.+++.++ +|+|++|+++|+ .+.+..|++|+ ++.|.||||+++|+.|.+.++.+++|+++|+|||||+|
T Consensus 157 ~~p~~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~i 236 (454)
T cd07118 157 FTSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQI 236 (454)
T ss_pred CCcHHHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceE
Confidence 9999999999999999 999999999984 45789999997 99999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHh
Q 014211 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLAS 362 (429)
Q Consensus 284 V~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~ 362 (429)
|++|||++.|++.+++++| +++||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+
T Consensus 237 V~~dAdl~~aa~~i~~~~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~ 315 (454)
T cd07118 237 VFADADLDAAADAVVFGVY-FNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITD 315 (454)
T ss_pred ECCCCCHHHHHHHHHHHHH-hccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999999999999999999999996 5789999999999999999
Q ss_pred HHHhhh-cCCEEEeCCccCC--CCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 363 LLDEDK-VSDKIVYGGQRDE--KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 363 ~i~~a~-~~~~vl~gg~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+|+++. .|+++++||..+. .|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 316 ~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~ 384 (454)
T cd07118 316 YVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDT 384 (454)
T ss_pred HHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCC
Confidence 999986 4779999998643 68999999999999999999999999999999999999999999975
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-74 Score=584.53 Aligned_cols=383 Identities=19% Similarity=0.321 Sum_probs=348.9
Q ss_pred ccccccceeeecceeeccCCccccccccCCceEeeeCCcc-hhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHH
Q 014211 15 GAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATM-AAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMS 93 (429)
Q Consensus 15 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg-~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~ 93 (429)
+.+.+-++|||| +|+. ++.+++++|| .|| ++++ .++.++.+|+++|+++|++||+.|+.+|..+|.+
T Consensus 33 ~~~~~~~~~i~g-~~~~--~~~~~~~~nP--------~t~~e~i~-~~~~~~~~dv~~av~~A~~a~~~W~~~~~~~R~~ 100 (500)
T TIGR01238 33 DKTWQAAPIIGH-SYKA--DGEAQPVTNP--------ADRRDIVG-QVFHANLAHVQAAIDSAQQAFPTWNATPAKERAA 100 (500)
T ss_pred cCceecCceECC-EEec--CCCeEEeeCC--------CCCCeEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 477788999999 9987 4545555555 885 7877 6779999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEE
Q 014211 94 QIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV 173 (429)
Q Consensus 94 ~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 173 (429)
+|++++++|++++++|++++++|+|||..++. .|+..+++.+++++...+.+.+. ..++|+|||
T Consensus 101 ~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i~~l~~~a~~~~~~~~~---------------~~~~P~GVV 164 (500)
T TIGR01238 101 KLDRLADLLELHMPELMALCVREAGKTIHNAI-AEVREAVDFCRYYAKQVRDVLGE---------------FSVESRGVF 164 (500)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc---------------eeccCcceE
Confidence 99999999999999999999999999999996 69999999999999988765321 258999999
Q ss_pred EEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEE
Q 014211 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKIL 250 (429)
Q Consensus 174 ~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ 250 (429)
++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++ +|+|+||+++|+ .+.+..|+.|+ ++.|.
T Consensus 165 ~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ 244 (500)
T TIGR01238 165 VCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVA 244 (500)
T ss_pred EEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEE
Confidence 9999999999999999999999999999999999999999999999999 999999999984 57889999986 99999
Q ss_pred EeCChHHHHHHHHHHhccc---CceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHH
Q 014211 251 YTGSPRVGRIVMAAAAKHL---TPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLI 327 (429)
Q Consensus 251 ftGs~~~~~~i~~~~~~~~---~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~ 327 (429)
||||+.+++.|.+.+++++ +|+++|+|||||+||++|+|++.|++.+++++| .++||.|+++++||||++++++|+
T Consensus 245 ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f-~nsGQ~C~a~~rv~V~~~i~d~f~ 323 (500)
T TIGR01238 245 FTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAF-DSAGQRCSALRVLCVQEDVADRVL 323 (500)
T ss_pred EECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCceeEEcHhhHHHHH
Confidence 9999999999999999876 799999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhc-CCEEEeCCc---c-CCCCceEecEEEecCCCCCCcc
Q 014211 328 DSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQ---R-DEKQLKIAPTILLDVPDDSTIM 401 (429)
Q Consensus 328 ~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~vl~gg~---~-~~~g~~~~Ptvl~~~~~~~~~~ 401 (429)
++|+++++++++|+|. +++++||++++.+++++.++++++.. |++++.++. . ...|+|++|||+.+ ++|.++
T Consensus 324 ~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~ 401 (500)
T TIGR01238 324 TMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAEL 401 (500)
T ss_pred HHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHh
Confidence 9999999999999996 58899999999999999999999865 556653322 1 23589999999974 688899
Q ss_pred ccCccccceeeEecC--CHHHHHHHHHhh
Q 014211 402 KEEIFGPLLPIVTVS--IVSSAHFKLKAC 428 (429)
Q Consensus 402 ~~E~fgPv~~v~~~~--~~~eai~l~n~~ 428 (429)
+||+||||++|++|+ +++|||+++|++
T Consensus 402 ~eE~FgPvl~v~~~~~~~~deai~~~N~~ 430 (500)
T TIGR01238 402 SEEVFGPVLHVVRYKARELDQIVDQINQT 430 (500)
T ss_pred hCCCcCCEEEEEEeCCCCHHHHHHHHhCC
Confidence 999999999999998 799999999975
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-75 Score=588.48 Aligned_cols=384 Identities=30% Similarity=0.484 Sum_probs=352.8
Q ss_pred eeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q 014211 29 YRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEE 108 (429)
Q Consensus 29 ~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (429)
|+++.+ ++|+++|| .||++++ .++.++.+|++.++++|++||+.|+.++..+|.++|++++++|+++.++
T Consensus 1 w~~~~~-~~~~v~~P--------~t~~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~ 70 (462)
T PF00171_consen 1 WVSSES-ETFDVINP--------ATGEVIG-EVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDE 70 (462)
T ss_dssp EEE-TS-SEEEEEET--------TTECEEE-EEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHH
T ss_pred CcCCCC-CEEcCCCC--------CCcCEEE-EEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhcccc
Confidence 888877 33555555 8999998 6669999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhh
Q 014211 109 IIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLD 188 (429)
Q Consensus 109 la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 188 (429)
|++++++|+|||+.+++. |+..+++.++|+++.++++.+ +..+. ..+...++.++|+||+++|+|||||+...++
T Consensus 71 la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 145 (462)
T PF00171_consen 71 LAELIALETGKPIAEARG-EVDRAIDFLRYYADAARKLAG-EVLPS---DPGSRNYTRREPLGVVLIITPWNFPLYLAVW 145 (462)
T ss_dssp HHHHHHHHHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTE-EEEEE---STTEEEEEEEEE-SEEEEEE-SSSCTHHHHH
T ss_pred cccccccccccccccccc-hhhhhhhhhhhhhhcccceeh-hhccc---ccccccccccccccceeeccccccccccccc
Confidence 999999999999999985 999999999999999998554 33222 2567789999999999999999999999999
Q ss_pred HHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHH
Q 014211 189 PVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAA 265 (429)
Q Consensus 189 ~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~ 265 (429)
++++||++||+||+|||+.+|.++.++.+++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+++++.|.+.+
T Consensus 146 ~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a 225 (462)
T PF00171_consen 146 KIAPALAAGNTVVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAA 225 (462)
T ss_dssp HHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHH
T ss_pred chhhhhcccccceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhc
Confidence 9999999999999999999999999999999998 99999999999 678899999996 99999999999999999999
Q ss_pred hcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-C
Q 014211 266 AKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-E 344 (429)
Q Consensus 266 ~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~ 344 (429)
+++++|+++|+|||||+||++|||++.|++.+++++| +++||.|+++++||||++++++|+++|+++++++++|+|. +
T Consensus 226 ~~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~ 304 (462)
T PF00171_consen 226 AKNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAF-FNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLRVGDPLDE 304 (462)
T ss_dssp HTTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHH-GGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSEBSSTTST
T ss_pred ccccccccccccccceeeEecccccccccccccchhc-ccccccccccccccccccccchhhhhhhhccccccccCCccc
Confidence 9999999999999999999999999999999999999 9999999999999999999999999999999999999996 5
Q ss_pred CCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCC----ccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHH
Q 014211 345 SKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGG----QRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVS 419 (429)
Q Consensus 345 ~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg----~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~ 419 (429)
++++||+++..+.+++.++++++. .|+++++|| .....|+|++|||+.+++++|+++++|+||||++|++|+|.+
T Consensus 305 ~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 384 (462)
T PF00171_consen 305 STDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLD 384 (462)
T ss_dssp TCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHH
T ss_pred cccccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccch
Confidence 889999999999999999999986 488999998 335678999999999999999999999999999999999999
Q ss_pred HHHHHHHhh
Q 014211 420 SAHFKLKAC 428 (429)
Q Consensus 420 eai~l~n~~ 428 (429)
||++++|++
T Consensus 385 eai~~~n~~ 393 (462)
T PF00171_consen 385 EAIALANDS 393 (462)
T ss_dssp HHHHHHHHS
T ss_pred hhhhccccc
Confidence 999999975
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-74 Score=580.81 Aligned_cols=373 Identities=26% Similarity=0.366 Sum_probs=347.8
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhh
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE 128 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 128 (429)
+||+||++++ .++.++.+|++++++.|++||+.|+.++..+|.++|+++++.|+++.++|++++++|+||++.++. .|
T Consensus 2 ~~P~t~~~i~-~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~e 79 (457)
T cd07090 2 IEPATGEVLA-TVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEAR-VD 79 (457)
T ss_pred cCCCCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HH
Confidence 4669999999 688999999999999999999999999999999999999999999999999999999999999986 69
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCC
Q 014211 129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA 208 (429)
Q Consensus 129 v~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~ 208 (429)
+..+++.+++++...+...+... .. ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~ 155 (457)
T cd07090 80 IDSSADCLEYYAGLAPTLSGEHV-PL---PGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFT 155 (457)
T ss_pred HHHHHHHHHHHHHHHHHhCCeee-cc---CCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcC
Confidence 99999999999988876433221 11 124567889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcC
Q 014211 209 PATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286 (429)
Q Consensus 209 ~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~ 286 (429)
|.++..+.+++.++ +|+|++|+++|+.+.+..|+.|+ ++.|.||||+++|+.|.+.++++++|+++|+|||||+||++
T Consensus 156 ~~~~~~l~~~~~~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~ 235 (457)
T cd07090 156 PLTALLLAEILTEAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFD 235 (457)
T ss_pred cHHHHHHHHHHHHcCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECC
Confidence 99999999999999 99999999998777888999997 99999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHH
Q 014211 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLD 365 (429)
Q Consensus 287 dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~ 365 (429)
|||++.|++.+++++| .++||.|+++++||||+++|++|+++|+++++++++|+|. +++++||+++..+++++.++|+
T Consensus 236 dAdl~~Aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~ 314 (457)
T cd07090 236 DADLENAVNGAMMANF-LSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIE 314 (457)
T ss_pred CCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999995 5889999999999999999999
Q ss_pred hhh-cCCEEEeCCccC------CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 366 EDK-VSDKIVYGGQRD------EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 366 ~a~-~~~~vl~gg~~~------~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++. .|+++++||... ..|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 315 ~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~ 384 (457)
T cd07090 315 SAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDT 384 (457)
T ss_pred HHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCC
Confidence 986 578999999752 248899999999999999999999999999999999999999999974
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-74 Score=579.66 Aligned_cols=374 Identities=25% Similarity=0.375 Sum_probs=347.8
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhh
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE 128 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 128 (429)
+||.||++++ .++.++.+|++.++++|++||+.|+.+|.++|.++|++++++|++++++|++++++|+|||..++...|
T Consensus 2 ~~P~t~~~i~-~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~e 80 (453)
T cd07115 2 LNPATGELIA-RVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLD 80 (453)
T ss_pred CCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4669999988 677999999999999999999999999999999999999999999999999999999999999997569
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCC
Q 014211 129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA 208 (429)
Q Consensus 129 v~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~ 208 (429)
+..+++.+++++.+.++..+.... ...+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 81 v~~~i~~l~~~~~~~~~~~g~~~~----~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~ 156 (453)
T cd07115 81 VPRAADTFRYYAGWADKIEGEVIP----VRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELT 156 (453)
T ss_pred HHHHHHHHHHHHHHHHHhcCceec----CCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCC
Confidence 999999999999887765432211 1234567899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEc
Q 014211 209 PATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285 (429)
Q Consensus 209 ~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~ 285 (429)
|.++..+.+++.++ +|++++|+++| +.+.++.|+.|+ +|.|.||||+++|+.|.+.++.+++|+++|+|||||+||+
T Consensus 157 p~~~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~ 236 (453)
T cd07115 157 PLSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVF 236 (453)
T ss_pred cHHHHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEEC
Confidence 99999999999999 99999999998 456789999997 9999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHH
Q 014211 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLL 364 (429)
Q Consensus 286 ~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i 364 (429)
+|||++.+++.+++++| .++||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|
T Consensus 237 ~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 315 (453)
T cd07115 237 ADADLDAAVRAAATGIF-YNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYV 315 (453)
T ss_pred CCCCHHHHHHHHHHHHH-hccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999996 588999999999999999999
Q ss_pred Hhhh-cCCEEEeCCccCC-CCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 365 DEDK-VSDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 365 ~~a~-~~~~vl~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++. .|+++++||..+. .|+|++|||+.++++++.+++||+||||++|++|+|.+|||+++|++
T Consensus 316 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~ 381 (453)
T cd07115 316 DVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGT 381 (453)
T ss_pred HHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCC
Confidence 9886 4679999987643 68999999999999999999999999999999999999999999975
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-74 Score=571.85 Aligned_cols=357 Identities=64% Similarity=1.049 Sum_probs=332.6
Q ss_pred HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCC
Q 014211 71 SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150 (429)
Q Consensus 71 ~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~ 150 (429)
+++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||+.++...|+..+++.+++++..+.++.++.
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 58999999999999999999999999999999999999999999999999998865699999999999999988776543
Q ss_pred cccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEE
Q 014211 151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRV 230 (429)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~ 230 (429)
.........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++++++.+++|+|++|+
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~~P~gvv~~ 162 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAIKV 162 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEEE
Confidence 21111111234568899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHh-cCCCc
Q 014211 231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMA-NNGQA 309 (429)
Q Consensus 231 v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~-~~Gq~ 309 (429)
++|+.+.+..|++|+++.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.+++.+++++| . |+||.
T Consensus 163 v~g~~~~~~~L~~~~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f-~~~~GQ~ 241 (432)
T cd07137 163 IEGGVPETTALLEQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKW-GCNNGQA 241 (432)
T ss_pred EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhh-hccCCCc
Confidence 999778888999888999999999999999999999999999999999999999999999999999999998 7 99999
Q ss_pred cccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCCCCceEecE
Q 014211 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPT 389 (429)
Q Consensus 310 C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~~g~~~~Pt 389 (429)
|++++++|||++++++|+++|+++++++++|+|++++++||++++.+++++.++++++..++++++||..+..|+|++||
T Consensus 242 C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga~~l~gg~~~~~g~~~~Pt 321 (432)
T cd07137 242 CIAPDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVADKIVHGGERDEKNLYIEPT 321 (432)
T ss_pred ccCCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCCeEEeCCCcCCCCCEEeeE
Confidence 99999999999999999999999999999999987889999999999999999999997788999999765568999999
Q ss_pred EEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 390 ILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 390 vl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
|+.+++++|.+++||+||||++|++|+|++|||+++|++
T Consensus 322 vl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~ 360 (432)
T cd07137 322 ILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSR 360 (432)
T ss_pred EEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcC
Confidence 999999999999999999999999999999999999985
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-74 Score=578.80 Aligned_cols=372 Identities=23% Similarity=0.348 Sum_probs=346.8
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhh
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE 128 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 128 (429)
+||.||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++. .|
T Consensus 4 ~~P~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~e 81 (451)
T cd07150 4 LNPADGSVYA-RVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAW-FE 81 (451)
T ss_pred cCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HH
Confidence 4559999998 677999999999999999999999999999999999999999999999999999999999999996 59
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCC
Q 014211 129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA 208 (429)
Q Consensus 129 v~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~ 208 (429)
+..+++.+++++...+++.+.... ....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 82 v~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~ 158 (451)
T cd07150 82 TTFTPELLRAAAGECRRVRGETLP---SDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEET 158 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccc---CCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccC
Confidence 999999999999988775443221 11134567899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEc
Q 014211 209 PATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285 (429)
Q Consensus 209 ~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~ 285 (429)
|.++..+.+++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+.+|+.|.+.++++++|+++|+|||||+||+
T Consensus 159 p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV~ 238 (451)
T cd07150 159 PVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIVL 238 (451)
T ss_pred cHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEEC
Confidence 99999999999999 99999999998 567788999986 9999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHH
Q 014211 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLL 364 (429)
Q Consensus 286 ~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i 364 (429)
+|+|++.+++.+++++| .++||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+.+++.+++
T Consensus 239 ~dadl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i 317 (451)
T cd07150 239 ADADLDYAVRAAAFGAF-MHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQV 317 (451)
T ss_pred CCCChHHHHHHHHHHHH-hhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999996 578999999999999999999
Q ss_pred Hhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 365 DEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 365 ~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++. .|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|++
T Consensus 318 ~~a~~~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 380 (451)
T cd07150 318 EDAVAKGAKLLTGGKY--DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDT 380 (451)
T ss_pred HHHHhCCCEEEeCCcc--CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCC
Confidence 9886 57899999865 48999999999999999999999999999999999999999999974
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-74 Score=574.45 Aligned_cols=384 Identities=14% Similarity=0.180 Sum_probs=339.9
Q ss_pred eeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhh--cCCCHHHH----HHHH
Q 014211 22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSR--KTKSYEWR----MSQI 95 (429)
Q Consensus 22 ~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w--~~~~~~~R----~~~L 95 (429)
+|||| +|+.+ +.++++ .||+||++++ .++.++.+|+++|+++|++||+.| +.++..+| .++|
T Consensus 1 ~~i~g-~~~~~--~~~~~~--------~nP~t~~~i~-~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il 68 (489)
T cd07126 1 NLVAG-KWKGA--SNYTTL--------LDPLNGDKFI-SVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVS 68 (489)
T ss_pred CcCCC-EEecC--CCcEEe--------eCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHH
Confidence 48999 99886 334444 4559999998 777999999999999999999988 56779999 8999
Q ss_pred HHHHHHHHHh--HHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEE
Q 014211 96 QSIANMIEEK--EEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV 173 (429)
Q Consensus 96 ~~~a~~l~~~--~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 173 (429)
+++++.|+++ .++|++++++|+|||+.+++ .|+..+++.+++++...++..+.... .+....+...++.++|+|||
T Consensus 69 ~~~a~~l~~~~~~~~la~~~~~e~GK~~~~a~-~Ev~~~~~~~~~~a~~~~~~~g~~~~-~~~~~~~~~~~v~r~P~GVV 146 (489)
T cd07126 69 HRVAHELRKPEVEDFFARLIQRVAPKSDAQAL-GEVVVTRKFLENFAGDQVRFLARSFN-VPGDHQGQQSSGYRWPYGPV 146 (489)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceec-cCCCCCCceeEEEEecceEE
Confidence 9999999998 59999999999999999996 79999999999999988776543311 01112245678999999999
Q ss_pred EEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEE
Q 014211 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILY 251 (429)
Q Consensus 174 ~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~f 251 (429)
++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+++|+.+.+..|+.|+ ++.|.|
T Consensus 147 ~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~~~~l~~~~~v~~V~F 226 (489)
T cd07126 147 AIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKILLEANPRMTLF 226 (489)
T ss_pred EEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchhHHHHhcCCCCCEEEE
Confidence 9999999999999999999999999999999999999999999999999 99999999999544466688775 999999
Q ss_pred eCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCC-CHHHHHHHHHHHHHHhcCCCccccccEEEEeCCc-hHHHHHH
Q 014211 252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTI-NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDF-APKLIDS 329 (429)
Q Consensus 252 tGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~da-dl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~-~~~f~~~ 329 (429)
|||+++|+.|...++ +++.+|+||+||+||++|+ |++.+++.+++++| .|+||.|++++|+|||+++ +++|+++
T Consensus 227 TGS~~vGr~i~~~~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f-~naGQ~C~a~~rv~V~~~i~~d~f~~~ 302 (489)
T cd07126 227 TGSSKVAERLALELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAY-ACSGQKCSAQSILFAHENWVQAGILDK 302 (489)
T ss_pred ECCHHHHHHHHHHhC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHH-hcCCCcCCCCceEEEeCcchHHHHHHH
Confidence 999999999988776 5799999999999999999 99999999999999 9999999999999999995 6899999
Q ss_pred HHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhh--cCCEEEeCCccCC-----CC-ceEecEEEec------CC
Q 014211 330 LRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK--VSDKIVYGGQRDE-----KQ-LKIAPTILLD------VP 395 (429)
Q Consensus 330 l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~--~~~~vl~gg~~~~-----~g-~~~~Ptvl~~------~~ 395 (429)
|++.++++++|+ +++||+++.. .+++.++++++. .|+++++||..+. .| .|++|||+.. ++
T Consensus 303 l~~~~~~~~~g~----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~ 377 (489)
T cd07126 303 LKALAEQRKLED----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIE 377 (489)
T ss_pred HHHHHHhcccCC----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCC
Confidence 999999998774 5899999988 899999999986 5789999997633 23 3899999942 56
Q ss_pred CCCCccccCccccceeeEecCC--HHHHHHHHHhh
Q 014211 396 DDSTIMKEEIFGPLLPIVTVSI--VSSAHFKLKAC 428 (429)
Q Consensus 396 ~~~~~~~~E~fgPv~~v~~~~~--~~eai~l~n~~ 428 (429)
++|.+++||+||||++|++|+| .+|||+++|++
T Consensus 378 ~~~~i~~eEiFGPVl~V~~~~~~~~deai~~aN~~ 412 (489)
T cd07126 378 ENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERM 412 (489)
T ss_pred CCCHHHhCCCcCCEEEEEEECCCCHHHHHHHHhCC
Confidence 7999999999999999999999 89999999975
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-73 Score=579.62 Aligned_cols=392 Identities=24% Similarity=0.367 Sum_probs=358.4
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCC-CHHHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTK-SYEWRMSQIQSI 98 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~-~~~~R~~~L~~~ 98 (429)
.++|||| +|+.+. +.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+ +..+|.++|+++
T Consensus 2 ~~~~i~g-~~~~~~-~~~~~~~~P--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~ 70 (473)
T cd07082 2 FKYLING-EWKESS-GKTIEVYSP--------IDGEVIG-SVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKF 70 (473)
T ss_pred CCceECC-EEecCC-CCeEeeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 4689999 999875 545555555 9999888 777999999999999999999999988 999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCccccccc--CCCCcceEEeecceEEEEE
Q 014211 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLT--TYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i 176 (429)
+++|++++++|++++++|+|||..++. .|+..+++.++++++..+++.+..... ... ..+...+..++|+||+++|
T Consensus 71 a~~l~~~~~el~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~P~GVv~~I 148 (473)
T cd07082 71 ADLLKENKEEVANLLMWEIGKTLKDAL-KEVDRTIDYIRDTIEELKRLDGDSLPG-DWFPGTKGKIAQVRREPLGVVLAI 148 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccc-cccccCCCceeEEEEecceEEEEE
Confidence 999999999999999999999999996 699999999999999988875543221 110 1245568899999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeC
Q 014211 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftG 253 (429)
+|||||+...++++++||++||+||+|||+.+|.++.++.+++.++ +|++++++++| +.+.+..|+.|+ +|.|.|||
T Consensus 149 ~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftG 228 (473)
T cd07082 149 GPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTG 228 (473)
T ss_pred CCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEEC
Confidence 9999999999999999999999999999999999999999999998 99999999998 455688999986 99999999
Q ss_pred ChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014211 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 254 s~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
|.++++.|.+.++ ++|+++|+||+||+||++|+|++.+++.+++++| .++||.|+++++||||++++++|+++|.++
T Consensus 229 s~~~g~~i~~~a~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~ 305 (473)
T cd07082 229 STEVGNRLKKQHP--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGAL-SYSGQRCTAIKRVLVHESVADELVELLKEE 305 (473)
T ss_pred cHHHHHHHHHHhC--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-HhCCCcCCCCeEEEEcHHHHHHHHHHHHHH
Confidence 9999999999876 7999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCcccccee
Q 014211 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~ 411 (429)
++++++|+|. +++++||+++..+++++.++++++. .|+++++||..+ .|+|+.|||+.++++++++++||+||||++
T Consensus 306 ~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~-~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~ 384 (473)
T cd07082 306 VAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE-GGNLIYPTLLDPVTPDMRLAWEEPFGPVLP 384 (473)
T ss_pred HhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCeEEeeEEEecCCCCCHHHhCcCcCceEE
Confidence 9999999996 4689999999999999999999885 578999999764 389999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHhh
Q 014211 412 IVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 412 v~~~~~~~eai~l~n~~ 428 (429)
|++|+|.+|||+++|++
T Consensus 385 v~~~~~~~eai~~~n~~ 401 (473)
T cd07082 385 IIRVNDIEEAIELANKS 401 (473)
T ss_pred EEEeCCHHHHHHHHhCC
Confidence 99999999999999975
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-73 Score=577.11 Aligned_cols=373 Identities=23% Similarity=0.354 Sum_probs=349.5
Q ss_pred eCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhH
Q 014211 50 CSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEI 129 (429)
Q Consensus 50 ~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev 129 (429)
||+||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..++. .|+
T Consensus 2 ~P~t~~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev 79 (452)
T cd07102 2 SPIDGSVIA-ERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAG-GEI 79 (452)
T ss_pred CCCCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHH-HHH
Confidence 679999998 677999999999999999999999999999999999999999999999999999999999999996 799
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCCh
Q 014211 130 SMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAP 209 (429)
Q Consensus 130 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~ 209 (429)
..+++.+++++..++++.+...... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~ 156 (452)
T cd07102 80 RGMLERARYMISIAEEALADIRVPE---KDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTP 156 (452)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccCC---CCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCc
Confidence 9999999999999988766543221 1344578899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCC
Q 014211 210 ATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDST 287 (429)
Q Consensus 210 ~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~d 287 (429)
+++..|.+++.++ +|++++|+++++.+.+..|+.|+ ++.|.||||+++|+.|.+.++++++|+.+|+|||||+||++|
T Consensus 157 ~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~d 236 (452)
T cd07102 157 LCGERFAAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPD 236 (452)
T ss_pred HHHHHHHHHHHhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCC
Confidence 9999999999999 99999999999668889999997 999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHh
Q 014211 288 INLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDE 366 (429)
Q Consensus 288 adl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~ 366 (429)
||++.|++.+++++| +++||.|++++++|||++++++|+++|+++++++++|+|. +++++||+++..+.+++.+++++
T Consensus 237 ADl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~ 315 (452)
T cd07102 237 ADLDAAAESLVDGAF-FNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIAD 315 (452)
T ss_pred CCHHHHHHHHHHHHH-HhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999999999999999999999999999996 57899999999999999999998
Q ss_pred hh-cCCEEEeCCcc----CCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 367 DK-VSDKIVYGGQR----DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 367 a~-~~~~vl~gg~~----~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+. .|+++++||.. +..|+|++|||+.+++++|+++++|+||||++|++|+|.+|||+++|++
T Consensus 316 a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~ 382 (452)
T cd07102 316 AIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDS 382 (452)
T ss_pred HHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCC
Confidence 85 57799999864 2368999999999999999999999999999999999999999999975
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-73 Score=571.05 Aligned_cols=361 Identities=47% Similarity=0.780 Sum_probs=336.3
Q ss_pred CHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHH
Q 014211 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELK 144 (429)
Q Consensus 65 ~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~ 144 (429)
+.+|+++|+++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.+++++..++
T Consensus 3 ~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~ 82 (436)
T cd07135 3 PLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNLK 82 (436)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999865699999999999999998
Q ss_pred hhcCCCccccc-ccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhc
Q 014211 145 YWTKPEKAKTS-LTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYV 223 (429)
Q Consensus 145 ~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~al 223 (429)
++.+.+..... ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~~l 162 (436)
T cd07135 83 KWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKYL 162 (436)
T ss_pred HhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhC
Confidence 87654432211 11124567889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHH
Q 014211 224 DNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303 (429)
Q Consensus 224 P~~~v~~v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~ 303 (429)
|+|++|+++|+.+....|+.|++|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|+|++.+++.+++++|
T Consensus 163 P~g~v~vv~g~~~~~~~l~~~~vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~- 241 (436)
T cd07135 163 DPDAFQVVQGGVPETTALLEQKFDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKF- 241 (436)
T ss_pred CcCEEEEEcCCchhHHHHHhCCCCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHh-
Confidence 9999999998655566788888999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCCCC
Q 014211 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ 383 (429)
Q Consensus 304 ~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~~g 383 (429)
.++||.|+++++||||++++++|+++|+++++++++|+|++++++||++++.+.+++.++++++ ++++++||..+..|
T Consensus 242 ~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~a--g~~v~~gg~~~~~g 319 (436)
T cd07135 242 GNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTT--KGKVVIGGEMDEAT 319 (436)
T ss_pred ccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhc--CCeEEECCCcCCCC
Confidence 9999999999999999999999999999999999999997788999999999999999999977 78999999876678
Q ss_pred ceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 384 LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 384 ~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+|++|||+.++++++.+++||+||||++|++|+|.+|||+++|++
T Consensus 320 ~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~ 364 (436)
T cd07135 320 RFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSR 364 (436)
T ss_pred CEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999975
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-73 Score=577.10 Aligned_cols=377 Identities=25% Similarity=0.383 Sum_probs=349.5
Q ss_pred eEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchh
Q 014211 46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFE 123 (429)
Q Consensus 46 ~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 123 (429)
+..+||.||++++ .++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||..+
T Consensus 4 ~~~~~P~t~~~i~-~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 82 (462)
T cd07112 4 FATINPATGRVLA-EVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPISD 82 (462)
T ss_pred EEeECCCCCCEEE-EEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHH
Confidence 5556669999998 6779999999999999999998 499999999999999999999999999999999999999999
Q ss_pred hhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEec
Q 014211 124 TFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLK 203 (429)
Q Consensus 124 a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~k 203 (429)
+...|+..+++.+++++...+++.+... . ...+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 83 a~~~ev~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~K 158 (462)
T cd07112 83 ALAVDVPSAANTFRWYAEAIDKVYGEVA-P---TGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLK 158 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcee-c---CCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeee
Confidence 8645999999999999999988765322 1 11244577899999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHh-cccCceeeecCCC
Q 014211 204 PSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAA-KHLTPVILELGGK 279 (429)
Q Consensus 204 ps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~-~~~~~~~~e~~G~ 279 (429)
||+.+|.++..+.+++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.||||+++|+.|.+.++ .+++|+++|+||+
T Consensus 159 ps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~ 238 (462)
T cd07112 159 PAEQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGK 238 (462)
T ss_pred CCCCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCC
Confidence 9999999999999999999 99999999998 566889999996 999999999999999999988 4899999999999
Q ss_pred CcEEEcCCC-CHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHH
Q 014211 280 SPAVVDSTI-NLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHF 357 (429)
Q Consensus 280 ~~~iV~~da-dl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~ 357 (429)
||+||++|+ |++.+++.+++++| +++||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.++
T Consensus 239 n~~iV~~da~dl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 317 (462)
T cd07112 239 SPNIVFADAPDLDAAAEAAAAGIF-WNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHF 317 (462)
T ss_pred CeEEECCCCcCHHHHHHHHHHHHH-hccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHH
Confidence 999999999 99999999999999 9999999999999999999999999999999999999996 57999999999999
Q ss_pred HHHHhHHHhhh-cCCEEEeCCccCC---CCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 358 ARLASLLDEDK-VSDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 358 ~~~~~~i~~a~-~~~~vl~gg~~~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++.++|+++. .|+++++||..+. .|+|++|||+.++++++++++||+||||++|++|+|.+|||+++|++
T Consensus 318 ~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~ 392 (462)
T cd07112 318 DKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDS 392 (462)
T ss_pred HHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCC
Confidence 99999999986 5789999987642 58899999999999999999999999999999999999999999986
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-73 Score=576.98 Aligned_cols=377 Identities=31% Similarity=0.459 Sum_probs=345.7
Q ss_pred eCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhH
Q 014211 50 CSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEI 129 (429)
Q Consensus 50 ~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev 129 (429)
||.||++++ .++.++.+|+++|+++|++||+.|+++|..+|.++|++++++|++++++|++++++|+|||+.+++..|+
T Consensus 2 ~P~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~ 80 (465)
T cd07098 2 DPATGQHLG-SVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI 80 (465)
T ss_pred CCCCCCeeE-EeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 679999999 7779999999999999999999999999999999999999999999999999999999999999876799
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCCh
Q 014211 130 SMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAP 209 (429)
Q Consensus 130 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~ 209 (429)
..+++.+++++...+.+.............+...++.++|+||+++|+|||||+..+++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p 160 (465)
T cd07098 81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA 160 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence 99999999999888776544322111101234567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH----hhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEE
Q 014211 210 ATSSLLAKLL----EDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283 (429)
Q Consensus 210 ~~~~~l~~~l----~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~i 283 (429)
+++..+++++ .++ +|+|+||+++|+.+.+..|+.|+ ++.|.||||+.+++.|.+.++++++|+++|+||||++|
T Consensus 161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~~~~i 240 (465)
T cd07098 161 WSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGKDPAI 240 (465)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEE
Confidence 9999876665 566 99999999999768889999997 99999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHh
Q 014211 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLAS 362 (429)
Q Consensus 284 V~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~ 362 (429)
|++|+|++.+++.+++++| .++||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+
T Consensus 241 V~~dadl~~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~ 319 (465)
T cd07098 241 VLDDADLDQIASIIMRGTF-QSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEE 319 (465)
T ss_pred ECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999999999999999999999996 6899999999999999999
Q ss_pred HHHhhh-cCCEEEeCCccC-----CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 363 LLDEDK-VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 363 ~i~~a~-~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++++. .|+++++||... ..|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 320 ~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 391 (465)
T cd07098 320 LVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANST 391 (465)
T ss_pred HHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCC
Confidence 999885 578999998642 248999999999999999999999999999999999999999999975
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-73 Score=576.06 Aligned_cols=373 Identities=25% Similarity=0.359 Sum_probs=344.6
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCc-hhhhHh
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP-FETFIS 127 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-~~a~~~ 127 (429)
+||.||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+||++ .+++ .
T Consensus 2 ~~P~t~~~~~-~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~-~ 79 (457)
T cd07108 2 INPATGQVIG-EVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQAR-P 79 (457)
T ss_pred cCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHH-H
Confidence 4669999999 67799999999999999999999999999999999999999999999999999999999997 5775 7
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCC
Q 014211 128 EISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEI 207 (429)
Q Consensus 128 ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~ 207 (429)
|+..+++.++++++....+.+.. .+. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 80 ev~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~ 155 (457)
T cd07108 80 EAAVLADLFRYFGGLAGELKGET-LPF---GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAED 155 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhCCce-ecc---CCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999998776543322 111 12345678899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHhhhcCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEc
Q 014211 208 APATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285 (429)
Q Consensus 208 ~~~~~~~l~~~l~~alP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~ 285 (429)
+|.++.++.+++.+++|++++|+++| +.+.++.|++|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||+
T Consensus 156 ~p~~~~~l~~~~~~~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~ 235 (457)
T cd07108 156 APLAVLLLAEILAQVLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVF 235 (457)
T ss_pred CcHHHHHHHHHHHHhCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEEC
Confidence 99999999999999999999999998 567788999997 9999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHH-HHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhH
Q 014211 286 STINLQVTTRRIIAG-KWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASL 363 (429)
Q Consensus 286 ~dadl~~aa~~i~~~-~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~ 363 (429)
+|+|++.|++.++++ +| .|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++
T Consensus 236 ~dAdl~~Aa~~iv~~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~ 314 (457)
T cd07108 236 PDADLDDAVDGAIAGMRF-TRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGY 314 (457)
T ss_pred CCCCHHHHHHHHHHhhHh-hcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 999999999999999 49 9999999999999999999999999999999999999996 57899999999999999999
Q ss_pred HHhhh--cCCEEEeCCccC-----CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 364 LDEDK--VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 364 i~~a~--~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++. .|+++++||..+ ..|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 315 i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~ 386 (457)
T cd07108 315 IDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDS 386 (457)
T ss_pred HHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCC
Confidence 99885 588999999763 358999999999999999999999999999999999999999999975
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-73 Score=569.88 Aligned_cols=353 Identities=49% Similarity=0.836 Sum_probs=328.8
Q ss_pred HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCC
Q 014211 71 SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150 (429)
Q Consensus 71 ~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~ 150 (429)
+.+++|++||+.|+.+++.+|+++|++++++|+++.++|++++++|+|||+.+++..|+..+++.+++++..++.+.+..
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 56899999999999999999999999999999999999999999999999999975699999999999999988887654
Q ss_pred cccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEE
Q 014211 151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRV 230 (429)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~ 230 (429)
.........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.+++|+|++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~alP~gv~~~ 161 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEETFDEEYVAV 161 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHhCCCCEEEE
Confidence 32211111244678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcc
Q 014211 231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQAC 310 (429)
Q Consensus 231 v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C 310 (429)
++|+.+.+..|+.|+++.|.||||+++|+.|.+.++++++|+++|+|||||+||++|+|++.+++.+++++| .|+||.|
T Consensus 162 v~g~~~~~~~L~~~~v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~-~~~GQ~C 240 (449)
T cd07136 162 VEGGVEENQELLDQKFDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKF-LNAGQTC 240 (449)
T ss_pred EeCChHHHHHHhcCCCCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHH-cccCCcc
Confidence 999777888999778999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred ccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCCCCceEecEE
Q 014211 311 IGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTI 390 (429)
Q Consensus 311 ~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~~g~~~~Ptv 390 (429)
++++++|||+++|++|+++|+++++++++|+|.+++++||++++.+.+++.++|+++ ++++||..+..|+|++|||
T Consensus 241 ~a~~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a----~~~~gG~~~~~g~~~~Ptv 316 (449)
T cd07136 241 VAPDYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNG----KIVFGGNTDRETLYIEPTI 316 (449)
T ss_pred cCCCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcc----eEEECCCcCCCCCEEeeEE
Confidence 999999999999999999999999999999987788999999999999999999864 8999997655689999999
Q ss_pred EecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 391 LLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 391 l~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+.+++++|.+++||+||||++|++|+|++|||+++|++
T Consensus 317 l~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~ 354 (449)
T cd07136 317 LDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSR 354 (449)
T ss_pred EecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCC
Confidence 99999999999999999999999999999999999975
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-73 Score=571.86 Aligned_cols=375 Identities=25% Similarity=0.361 Sum_probs=346.7
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhh
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE 128 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 128 (429)
+||+||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..++...|
T Consensus 2 ~~P~t~~~i~-~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e 80 (450)
T cd07092 2 VDPATGEEIA-TVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE 80 (450)
T ss_pred cCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence 4669999999 577999999999999999999999999999999999999999999999999999999999998765569
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCC
Q 014211 129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA 208 (429)
Q Consensus 129 v~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~ 208 (429)
+..+++.+++++...+.+.+..... ...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~ 157 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPAAGE---YLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETT 157 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCc---cCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 9999999999998776643322111 1123456789999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhcCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcC
Q 014211 209 PATSSLLAKLLEDYVDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286 (429)
Q Consensus 209 ~~~~~~l~~~l~~alP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~ 286 (429)
|.++.++.+++.+.+|+|++|+++|+ .+.+..|+.|+ ++.|.||||+.+|+.|.+.++++++|+++|+|||||+||++
T Consensus 158 ~~~~~~l~~~~~~glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~~ 237 (450)
T cd07092 158 PLTTLLLAELAAEVLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVFD 237 (450)
T ss_pred hHHHHHHHHHHHhcCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEECC
Confidence 99999999999988999999999984 45788999996 99999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHH
Q 014211 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLD 365 (429)
Q Consensus 287 dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~ 365 (429)
|||++.|++.+++++| +|+||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++|+
T Consensus 238 dAdl~~aa~~iv~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~ 316 (450)
T cd07092 238 DADLDAAVAGIATAGY-YNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVE 316 (450)
T ss_pred CCCHHHHHHHHHHHHH-hhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999996 5789999999999999999999
Q ss_pred hhhcCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 366 EDKVSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 366 ~a~~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++..++++++||... ..|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 317 ~a~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~ 380 (450)
T cd07092 317 RAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDV 380 (450)
T ss_pred HHHcCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCC
Confidence 888788999999763 368999999999999999999999999999999999999999999975
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-73 Score=568.89 Aligned_cols=354 Identities=24% Similarity=0.392 Sum_probs=332.6
Q ss_pred HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcC
Q 014211 69 AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTK 148 (429)
Q Consensus 69 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~ 148 (429)
+++|+++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.++|++...+++.+
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~~~~~~~~~~ 79 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEAR-AEVEKCAWICRYYAENAEAFLA 79 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 478999999999999999999999999999999999999999999999999999997 6999999999999999998875
Q ss_pred CCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCc
Q 014211 149 PEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSA 227 (429)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~ 227 (429)
...... .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|.+++.++ +|+|+
T Consensus 80 ~~~~~~----~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gv 155 (429)
T cd07100 80 DEPIET----DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGV 155 (429)
T ss_pred CeeccC----CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCc
Confidence 443321 1445788999999999999999999999999999999999999999999999999999999998 99999
Q ss_pred eEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcC
Q 014211 228 VRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANN 306 (429)
Q Consensus 228 v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~ 306 (429)
+|+++|+.+.+..|+.|+ ++.|.||||+++|+.|.+.++++++|+++|+|||||+||++|+|++.|++.+++++| +++
T Consensus 156 v~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~-~~~ 234 (429)
T cd07100 156 FQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRL-QNA 234 (429)
T ss_pred EEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hcc
Confidence 999998667788999996 999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCC
Q 014211 307 GQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQ 383 (429)
Q Consensus 307 Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g 383 (429)
||.|+++++||||+++|++|+++|++++.++++|+|. +++++||++++.+++++.++++++. .|+++++||... ..|
T Consensus 235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g 314 (429)
T cd07100 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPG 314 (429)
T ss_pred CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence 9999999999999999999999999999999999996 5789999999999999999999986 577999999763 358
Q ss_pred ceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 384 LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 384 ~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 315 ~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~ 359 (429)
T cd07100 315 AFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDS 359 (429)
T ss_pred eEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999975
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-73 Score=570.90 Aligned_cols=374 Identities=24% Similarity=0.358 Sum_probs=344.4
Q ss_pred eeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHh
Q 014211 48 CRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFIS 127 (429)
Q Consensus 48 ~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ 127 (429)
++||+||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..+++ .
T Consensus 3 ~~~P~t~~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ 80 (452)
T cd07147 3 VTNPYTGEVVA-RVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDAR-G 80 (452)
T ss_pred ccCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-H
Confidence 34569999998 677999999999999999999999999999999999999999999999999999999999999997 6
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCccc-ccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCC
Q 014211 128 EISMTKSSCKLALKELKYWTKPEKAK-TSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE 206 (429)
Q Consensus 128 ev~~a~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~ 206 (429)
|+..+++.+++++..+.++.+..... ......+...++.++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~ 160 (452)
T cd07147 81 EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPAS 160 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999999999999888765433211 11111244567889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEE
Q 014211 207 IAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284 (429)
Q Consensus 207 ~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV 284 (429)
.+|.++.++++++.++ +|+|+||+++|+.+.+..|+.|+ ++.|.||||+++|+.|.+.++. +|+++|+|||||+||
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~--~~v~lelgG~~p~iV 238 (452)
T cd07147 161 RTPLSALILGEVLAETGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--KKVVLELGGNAAVIV 238 (452)
T ss_pred CCcHHHHHHHHHHHHcCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc--CceEeecCCCCcEEE
Confidence 9999999999999999 99999999999777888999986 9999999999999999998764 699999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhH
Q 014211 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASL 363 (429)
Q Consensus 285 ~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~ 363 (429)
++|+|++.+++.+++++| +++||.|+++++||||++++++|+++|++++++++.|+|. +++++||++++.+++++.++
T Consensus 239 ~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~ 317 (452)
T cd07147 239 DSDADLDFAAQRIIFGAF-YQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGW 317 (452)
T ss_pred CCCCCHHHHHHHHHHHHH-hccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999996 57899999999999999999
Q ss_pred HHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 364 LDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 364 i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++. .|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|++
T Consensus 318 i~~a~~~Ga~~l~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~ 381 (452)
T cd07147 318 VNEAVDAGAKLLTGGKR--DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDS 381 (452)
T ss_pred HHHHHHCCCEEEecCCc--CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCC
Confidence 99986 57799999876 48899999999999999999999999999999999999999999975
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-73 Score=568.94 Aligned_cols=365 Identities=25% Similarity=0.328 Sum_probs=338.0
Q ss_pred hhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHH
Q 014211 55 AAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKS 134 (429)
Q Consensus 55 ~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~ 134 (429)
++++ .++.++.+|+++++++|++||+.|++++..+|.++|+++++.|++++++|++++++|+||+..++. .|+..+++
T Consensus 2 ~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~i~ 79 (443)
T cd07152 2 AVLG-EVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAG-FEVGAAIG 79 (443)
T ss_pred CEEE-EEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHH-HHHHHHHH
Confidence 3444 455999999999999999999999999999999999999999999999999999999999999986 69999999
Q ss_pred HHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHH-H
Q 014211 135 SCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS-S 213 (429)
Q Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~-~ 213 (429)
.+++++...+...+... . ...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++ .
T Consensus 80 ~l~~~~~~~~~~~~~~~-~---~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~ 155 (443)
T cd07152 80 ELHEAAGLPTQPQGEIL-P---SAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGV 155 (443)
T ss_pred HHHHHHHhHHHhCCccc-c---ccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHH
Confidence 99999987665433221 1 11345678899999999999999999999999999999999999999999999996 7
Q ss_pred HHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHH
Q 014211 214 LLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQ 291 (429)
Q Consensus 214 ~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~ 291 (429)
.+.+++.++ +|++++|+++|+.+.+..|+.|+ ++.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|+|++
T Consensus 156 ~l~~~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~ 235 (443)
T cd07152 156 VIARLFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLD 235 (443)
T ss_pred HHHHHHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHH
Confidence 889999999 99999999999777889999997 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-c
Q 014211 292 VTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-V 369 (429)
Q Consensus 292 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~ 369 (429)
.|++.+++++| .++||.|+++++||||+++|++|+++|+++++++++|+|. +++++||++++.+++++.++|+++. .
T Consensus 236 ~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 314 (443)
T cd07152 236 LAASNGAWGAF-LHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAA 314 (443)
T ss_pred HHHHHHHHHHH-hhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhC
Confidence 99999999999 9999999999999999999999999999999999999996 5789999999999999999999986 4
Q ss_pred CCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 370 ~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|++
T Consensus 315 Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~ 371 (443)
T cd07152 315 GARLEAGGTY--DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDT 371 (443)
T ss_pred CCEEEeccCc--CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCC
Confidence 7899999875 48999999999999999999999999999999999999999999975
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-72 Score=569.53 Aligned_cols=374 Identities=26% Similarity=0.389 Sum_probs=344.8
Q ss_pred eeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHh
Q 014211 48 CRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFIS 127 (429)
Q Consensus 48 ~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ 127 (429)
..||.||++++ .++.++.+|+++++++|++||+.|++++..+|.++|+++++.|+++.++|++++++|+|||..+++ .
T Consensus 3 ~~~P~t~~~~~-~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ 80 (453)
T cd07094 3 VHNPYDGEVIG-KVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR-V 80 (453)
T ss_pred ccCCCCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-H
Confidence 34569999998 677999999999999999999999999999999999999999999999999999999999999997 6
Q ss_pred hHHHHHHHHHHHHHHHHhhcCCCcccc-cccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCC
Q 014211 128 EISMTKSSCKLALKELKYWTKPEKAKT-SLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE 206 (429)
Q Consensus 128 ev~~a~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~ 206 (429)
|+..+++.+++++..++++.+...... .....+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~ 160 (453)
T cd07094 81 EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999999888765332111 0001234567889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEE
Q 014211 207 IAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283 (429)
Q Consensus 207 ~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~i 283 (429)
.+|+++.++++++.++ +|++++++++|+ .+.+..|++|+ ++.|.||||.++|+.|.+.+ +++|+++|+|||||+|
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~~~i 238 (453)
T cd07094 161 KTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNAPVI 238 (453)
T ss_pred cchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCCceE
Confidence 9999999999999998 999999999984 45689999997 99999999999999999987 5789999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHh
Q 014211 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLAS 362 (429)
Q Consensus 284 V~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~ 362 (429)
|++|+|++.+++.+++++| .++||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.+
T Consensus 239 V~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~ 317 (453)
T cd07094 239 VDRDADLDAAIEALAKGGF-YHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVER 317 (453)
T ss_pred ECCCCCHHHHHHHHHHHHH-HhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999999999999999999999996 5789999999999999999
Q ss_pred HHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 363 LLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 363 ~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++++. .|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 318 ~i~~a~~~Ga~v~~gg~~--~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~ 382 (453)
T cd07094 318 WVEEAVEAGARLLCGGER--DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANST 382 (453)
T ss_pred HHHHHHHCCCEEEeCccC--CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCC
Confidence 999986 47799999865 48899999999999999999999999999999999999999999975
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-72 Score=569.69 Aligned_cols=374 Identities=27% Similarity=0.387 Sum_probs=346.0
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhH
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI 126 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 126 (429)
+||.||++++ .++.++.+|++.++++|++|++ .|+.+|..+|.++|++++++|.+++++|++++++|+|||+.+++
T Consensus 2 ~~P~tg~~i~-~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~- 79 (457)
T cd07114 2 INPATGEPWA-RVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETR- 79 (457)
T ss_pred cCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-
Confidence 5679999999 6779999999999999999997 49999999999999999999999999999999999999999997
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCC
Q 014211 127 SEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE 206 (429)
Q Consensus 127 ~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~ 206 (429)
.|+..+++.+++++...+...+... +....+...+..++|+||+++|+|||||+...++++++||++||+||+|||+
T Consensus 80 ~ev~~~~~~~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~ 156 (457)
T cd07114 80 AQVRYLAEWYRYYAGLADKIEGAVI---PVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSE 156 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCccc---ccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCc
Confidence 6999999999999987765433221 1111344578899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEE
Q 014211 207 IAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283 (429)
Q Consensus 207 ~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~i 283 (429)
.+|.++..|+++|.++ +|+++||+++| +.+.+..|+.|+ ++.|.||||+++++.+.+.++++++|+++|+|||||+|
T Consensus 157 ~~p~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~i 236 (457)
T cd07114 157 HTPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNI 236 (457)
T ss_pred cchHHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeE
Confidence 9999999999999999 99999999998 456788899996 99999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHh
Q 014211 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLAS 362 (429)
Q Consensus 284 V~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~ 362 (429)
|++|||++.|++.+++++| .++||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+.+++.+
T Consensus 237 V~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~ 315 (457)
T cd07114 237 VFDDADLDAAVNGVVAGIF-AAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVER 315 (457)
T ss_pred ECCCCCHHHHHHHHHHHHH-hccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999999999999999999999996 5889999999999999999
Q ss_pred HHHhhh-cCCEEEeCCccCC-----CCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 363 LLDEDK-VSDKIVYGGQRDE-----KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 363 ~i~~a~-~~~~vl~gg~~~~-----~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++++. .|+++++||.... .|+|++|||+.++++++.+++||+||||++|++|+|.+|||+++|++
T Consensus 316 ~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~ 387 (457)
T cd07114 316 YVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDS 387 (457)
T ss_pred HHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCC
Confidence 999886 4779999997632 47999999999999999999999999999999999999999999975
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-72 Score=567.78 Aligned_cols=374 Identities=26% Similarity=0.396 Sum_probs=348.2
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhh
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE 128 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 128 (429)
+||.||++++ .++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+||+..+++ .|
T Consensus 2 ~~P~tg~~i~-~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~e 79 (451)
T cd07103 2 INPATGEVIG-EVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEAR-GE 79 (451)
T ss_pred cCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HH
Confidence 4679999998 677999999999999999999999999999999999999999999999999999999999999997 69
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCC
Q 014211 129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA 208 (429)
Q Consensus 129 v~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~ 208 (429)
+..+++.+++++...++..+.... ....+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+
T Consensus 80 v~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~ 156 (451)
T cd07103 80 VDYAASFLEWFAEEARRIYGRTIP---SPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEET 156 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccc---cCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccC
Confidence 999999999999888776543321 11235567899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEc
Q 014211 209 PATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285 (429)
Q Consensus 209 ~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~ 285 (429)
|.++..+.++|.++ +|++++|++++ +.+.++.|+.|+ +|.|.||||+.+|+.+.+.++++++|+++|+|||||+||+
T Consensus 157 ~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~ 236 (451)
T cd07103 157 PLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVF 236 (451)
T ss_pred cHHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEEC
Confidence 99999999999999 99999999998 456788899986 9999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHH
Q 014211 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLL 364 (429)
Q Consensus 286 ~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i 364 (429)
+|+|++.|++.+++++| .++||.|+++++||||++++++|+++|++++++++.|+|. +++++||++++.+.+++.+++
T Consensus 237 ~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i 315 (451)
T cd07103 237 DDADLDKAVDGAIASKF-RNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALV 315 (451)
T ss_pred CCCCHHHHHHHHHHHHH-HhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999986 578999999999999999999
Q ss_pred Hhhh-cCCEEEeCCccCC-CCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 365 DEDK-VSDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 365 ~~a~-~~~~vl~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++. .|+++++||..+. .|+|++|||+.++++++.++++|+||||++|++|+|.+|||+++|++
T Consensus 316 ~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 381 (451)
T cd07103 316 EDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDT 381 (451)
T ss_pred HHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCC
Confidence 9986 5789999987643 68999999999999999999999999999999999999999999975
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-72 Score=559.99 Aligned_cols=354 Identities=23% Similarity=0.351 Sum_probs=330.7
Q ss_pred HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhc
Q 014211 68 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWT 147 (429)
Q Consensus 68 dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~ 147 (429)
|+++++++|++||+.|+.+|..+|.++|+++++.|+++.++|++++++|+|||+.++. .|+..+++.+++++..+.++.
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~ 79 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ-TEVAAMAGKIDISIKAYHERT 79 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999999999999999999999999999996 699999999999999888876
Q ss_pred CCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCC
Q 014211 148 KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNS 226 (429)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~ 226 (429)
+..... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++.+++.++ +|+|
T Consensus 80 ~~~~~~----~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g 155 (431)
T cd07095 80 GERATP----MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPG 155 (431)
T ss_pred CCcccC----CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChh
Confidence 544321 12456789999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred ceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcc-cCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHh
Q 014211 227 AVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKH-LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMA 304 (429)
Q Consensus 227 ~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~-~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~ 304 (429)
++|+++|+.+.+..|++|+ +|.|.||||+++|+.|.+.++.+ ++++++|+|||||+||++|+|++.|++.+++++| +
T Consensus 156 ~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~-~ 234 (431)
T cd07095 156 VLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAF-L 234 (431)
T ss_pred HheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHH-H
Confidence 9999999777889999997 99999999999999999987755 6999999999999999999999999999999999 9
Q ss_pred cCCCccccccEEEEeCC-chHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-C
Q 014211 305 NNGQACIGVDYIITTKD-FAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-D 380 (429)
Q Consensus 305 ~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~ 380 (429)
|+||.|+++++||||++ ++++|+++|+++++++++|+|. +++.+||++++.+++++.++++++. .|+++++||.. +
T Consensus 235 ~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~ 314 (431)
T cd07095 235 TAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLV 314 (431)
T ss_pred hCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCC
Confidence 99999999999999999 9999999999999999999996 4689999999999999999999986 47899999865 3
Q ss_pred CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 381 EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 381 ~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
..|+|++|||+ +++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 315 ~~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~ 361 (431)
T cd07095 315 AGTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANAT 361 (431)
T ss_pred CCCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCC
Confidence 46899999999 688899999999999999999999999999999975
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-72 Score=563.84 Aligned_cols=374 Identities=24% Similarity=0.374 Sum_probs=347.1
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhh
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE 128 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 128 (429)
+||.||++++ .++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|++++++|++++++|+||+..+++..|
T Consensus 2 ~~P~t~~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e 80 (455)
T cd07093 2 FNPATGEVLA-KVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD 80 (455)
T ss_pred cCCCCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 3669999999 677999999999999999999999999999999999999999999999999999999999998886669
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCC
Q 014211 129 ISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIA 208 (429)
Q Consensus 129 v~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~ 208 (429)
+..+++.+++++....+..+.. ... ..+...+..++|+||+++|+|||||+...++++++||++||+||+|||+.+
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~ 156 (455)
T cd07093 81 IPRAAANFRFFADYILQLDGES-YPQ---DGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWT 156 (455)
T ss_pred HHHHHHHHHHHHHhHHHhCCcc-ccC---CCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcC
Confidence 9999999999998877633222 111 135567889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEc
Q 014211 209 PATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285 (429)
Q Consensus 209 ~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~ 285 (429)
|.++..+.+++.++ +|+++||+++| +.+.+..|+.|+ ++.|.||||+.+++.+.+.++++++|+++|+|||||+||+
T Consensus 157 p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~ 236 (455)
T cd07093 157 PLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVF 236 (455)
T ss_pred cHHHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEEC
Confidence 99999999999999 99999999998 567889999997 9999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHH
Q 014211 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLL 364 (429)
Q Consensus 286 ~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i 364 (429)
+|||++.+++.+++++| .++||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+.+++.+++
T Consensus 237 ~dAdl~~a~~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i 315 (455)
T cd07093 237 ADADLDRAVDAAVRSSF-SNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYV 315 (455)
T ss_pred CCCCHHHHHHHHHHHHH-hccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999996 578999999999999999999
Q ss_pred Hhhh-cCCEEEeCCccCC-----CCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 365 DEDK-VSDKIVYGGQRDE-----KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 365 ~~a~-~~~~vl~gg~~~~-----~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++. .|+++++||..+. .|+|++|||+.++++++.+++||+||||++|++|+|.+|||+++|++
T Consensus 316 ~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 385 (455)
T cd07093 316 ELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDT 385 (455)
T ss_pred HHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCC
Confidence 9885 5789999997642 48899999999999999999999999999999999999999999874
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-72 Score=600.72 Aligned_cols=375 Identities=21% Similarity=0.340 Sum_probs=344.9
Q ss_pred eEeeeCCcch-hhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhh
Q 014211 46 FSCRCSATMA-AEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124 (429)
Q Consensus 46 ~~~~~p~tg~-~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 124 (429)
+...||+|++ +++ .++.++.+|+++|+++|++||+.|+.+|+.+|+++|++++++|++++++|+.++++|+||++.++
T Consensus 564 ~~v~nP~~~~~~vg-~v~~a~~~~v~~Ai~aA~~A~~~W~~~~~~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~~~a 642 (1038)
T PRK11904 564 RPVVSPADRRRVVG-EVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQDA 642 (1038)
T ss_pred EEEECCCCCCeeEE-EEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 4444558877 666 66699999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhHHHHHHHHHHHHHHHHhhcCCC-cccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEec
Q 014211 125 FISEISMTKSSCKLALKELKYWTKPE-KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLK 203 (429)
Q Consensus 125 ~~~ev~~a~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~k 203 (429)
. .|+..+++.++||+...+++.+.. ..+. ..+..++..++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 643 ~-~EV~eaid~lr~ya~~a~~~~~~~~~l~g---~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlK 718 (1038)
T PRK11904 643 I-AEVREAVDFCRYYAAQARRLFGAPEKLPG---PTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAK 718 (1038)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhhCCCcccCC---CCCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEee
Confidence 5 799999999999999998876432 1111 2366788999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcc---cCceeeecC
Q 014211 204 PSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKH---LTPVILELG 277 (429)
Q Consensus 204 ps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~---~~~~~~e~~ 277 (429)
||+.+|+++..+.+++.++ +|+|++|+++|+ .+.+..|+.|+ ++.|.||||+++++.|.+.++.+ ++|+++|+|
T Consensus 719 Pse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElG 798 (1038)
T PRK11904 719 PAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETG 798 (1038)
T ss_pred CCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcC
Confidence 9999999999999999999 999999999995 45889999997 99999999999999999988865 689999999
Q ss_pred CCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHH
Q 014211 278 GKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFH 356 (429)
Q Consensus 278 G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~ 356 (429)
|||++||++|||++.|++.+++|+| .++||.|+++++||||+++|++|+++|++.++++++|+|. .++++||+|++.+
T Consensus 799 GkNa~IV~~dAdld~Av~~iv~saF-~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a 877 (1038)
T PRK11904 799 GQNAMIVDSTALPEQVVDDVVTSAF-RSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEA 877 (1038)
T ss_pred CcCeEEECCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCCHHH
Confidence 9999999999999999999999999 9999999999999999999999999999999999999996 5889999999999
Q ss_pred HHHHHhHHHhhhcCCEEEeCCccCC---CCceEecEEEecCCCCCCccccCccccceeeEecC--CHHHHHHHHHhh
Q 014211 357 FARLASLLDEDKVSDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS--IVSSAHFKLKAC 428 (429)
Q Consensus 357 ~~~~~~~i~~a~~~~~vl~gg~~~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~--~~~eai~l~n~~ 428 (429)
++++.++|++++.++++++||..++ .|+|+.|||+.. +++.+++||+||||++|++|+ +++|+|+++|++
T Consensus 878 ~~~l~~~I~~a~~ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t 952 (1038)
T PRK11904 878 KANLDAHIERMKREARLLAQLPLPAGTENGHFVAPTAFEI--DSISQLEREVFGPILHVIRYKASDLDKVIDAINAT 952 (1038)
T ss_pred HHHHHHHHHHHHcCCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCC
Confidence 9999999999988999999997643 489999999963 577789999999999999998 689999999985
|
|
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-71 Score=557.87 Aligned_cols=353 Identities=50% Similarity=0.824 Sum_probs=328.3
Q ss_pred HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCC
Q 014211 71 SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150 (429)
Q Consensus 71 ~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~ 150 (429)
+|+++|++||+.|+.+++.+|+++|+++++.|++++++|++++++|+|||+.++...|+..+++.++++++.++++.+..
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 58999999999999999999999999999999999999999999999999999876799999999999999998887544
Q ss_pred cccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEE
Q 014211 151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRV 230 (429)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~ 230 (429)
.........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+++|+|++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~lp~gv~~v 161 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKYLDKECYPV 161 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCeEEE
Confidence 32211112234578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcc
Q 014211 231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQAC 310 (429)
Q Consensus 231 v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C 310 (429)
++|+.+.+..|+.+.+|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .++||.|
T Consensus 162 v~g~~~~~~~l~~~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f-~~~GQ~C 240 (443)
T cd07132 162 VLGGVEETTELLKQRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKF-INAGQTC 240 (443)
T ss_pred EeCCHHHHHHHHhCCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCce
Confidence 999777777888767999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred ccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCCCCceEecEE
Q 014211 311 IGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTI 390 (429)
Q Consensus 311 ~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~~g~~~~Ptv 390 (429)
++++++|||++++++|+++|+++++++++|+|++++++||++++.+++++.+++++ +++++||..+..|+|++|||
T Consensus 241 ~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~----a~~~~gg~~~~~~~~~~Ptv 316 (443)
T cd07132 241 IAPDYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSG----GKVAIGGQTDEKERYIAPTV 316 (443)
T ss_pred eCCcEEEEcHHHHHHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhC----CEEEeCCccCCCCCEEeeEE
Confidence 99999999999999999999999999999988878999999999999999999884 48899997765689999999
Q ss_pred EecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 391 LLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 391 l~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+.+++++|++++||+||||++|++|+|.+|||+++|++
T Consensus 317 l~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~ 354 (443)
T cd07132 317 LTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSR 354 (443)
T ss_pred EeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcC
Confidence 99999999999999999999999999999999999975
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-71 Score=559.21 Aligned_cols=370 Identities=25% Similarity=0.346 Sum_probs=338.6
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhh
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE 128 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 128 (429)
.||+||++++ .++.++.+|+++|+++|+++ |+.+++.+|.++|+++++.|++++++|++++++|+|||..++. .|
T Consensus 4 ~~P~tg~~i~-~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~e 78 (451)
T cd07146 4 RNPYTGEVVG-TVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTR-YE 78 (451)
T ss_pred cCCCCCCEEE-EEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HH
Confidence 4569999998 56799999999999999875 8889999999999999999999999999999999999999996 69
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcccc-cccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCC
Q 014211 129 ISMTKSSCKLALKELKYWTKPEKAKT-SLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEI 207 (429)
Q Consensus 129 v~~a~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~ 207 (429)
+..+++.+++++.....+.+...... .....+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 79 v~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~ 158 (451)
T cd07146 79 VGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEK 158 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 99999999999998877644322111 00012345678999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEE
Q 014211 208 APATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284 (429)
Q Consensus 208 ~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV 284 (429)
+|+++..+.+++.++ +|+|++|+++|+ .+.+..|++|+ ++.|.||||+.+|+.|.+.++ .+|+++|+|||||+||
T Consensus 159 ~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~p~iV 236 (451)
T cd07146 159 TPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGNDPLIV 236 (451)
T ss_pred chHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCceEEE
Confidence 999999999999999 999999999984 56789999996 999999999999999998775 6899999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhH
Q 014211 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASL 363 (429)
Q Consensus 285 ~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~ 363 (429)
++|+|++.+++.+++++| +++||.|+++++||||++++++|+++|+++++++++|+|. +++++||++++.+++++.++
T Consensus 237 ~~daDl~~aa~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~ 315 (451)
T cd07146 237 MDDADLERAATLAVAGSY-ANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENR 315 (451)
T ss_pred CCCCCHHHHHHHHHHHHH-hhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999996 57899999999999999999
Q ss_pred HHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 364 LDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 364 i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++. .|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 316 v~~a~~~Ga~vl~gg~~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~ 379 (451)
T cd07146 316 VEEAIAQGARVLLGNQR--QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNST 379 (451)
T ss_pred HHHHHhCCCEEEeCCCc--CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCC
Confidence 99885 57899999865 48999999999999999999999999999999999999999999975
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-71 Score=555.66 Aligned_cols=356 Identities=37% Similarity=0.628 Sum_probs=328.0
Q ss_pred HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCC-chhhhHhhHHHHHHHHHHHHHHHHhhcCC
Q 014211 71 SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKP-PFETFISEISMTKSSCKLALKELKYWTKP 149 (429)
Q Consensus 71 ~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~-~~~a~~~ev~~a~~~l~~~~~~~~~~~~~ 149 (429)
..+++|++||+.|+.+++.+|.++|++++++|++++++|++++++|+||+ ..++...|+..+++.+++++..+.++.+.
T Consensus 2 ~~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~ 81 (434)
T cd07133 2 ALLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKP 81 (434)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 36788999999999999999999999999999999999999999999985 56775579999999999999999887765
Q ss_pred CcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceE
Q 014211 150 EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVR 229 (429)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~ 229 (429)
..........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++.+++.+++|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~alP~g~~~ 161 (434)
T cd07133 82 SRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEYFDEDEVA 161 (434)
T ss_pred cccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCcCeEE
Confidence 53222111234457899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCc
Q 014211 230 VVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309 (429)
Q Consensus 230 ~v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~ 309 (429)
+++|+.+.+..|+.+++|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|+|++.|++.+++++| +|+||.
T Consensus 162 ~v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~ 240 (434)
T cd07133 162 VVTGGADVAAAFSSLPFDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKL-LNAGQT 240 (434)
T ss_pred EEeCChHHHHHHHhCCCCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHh-ccCCCc
Confidence 9999777888888778999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred cccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC---CCCce
Q 014211 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD---EKQLK 385 (429)
Q Consensus 310 C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~---~~g~~ 385 (429)
|++++++|||++++++|+++|+++++++++|+ .+++++||++++.+++++.++|++++ .|+++++||... ..|+|
T Consensus 241 C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~-~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~ 319 (434)
T cd07133 241 CVAPDYVLVPEDKLEEFVAAAKAAVAKMYPTL-ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRK 319 (434)
T ss_pred ccCCCEEEEcHHHHHHHHHHHHHHHHHhcCCC-CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcE
Confidence 99999999999999999999999999998886 56789999999999999999999985 578999988653 35899
Q ss_pred EecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 386 IAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 386 ~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 320 ~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~ 362 (434)
T cd07133 320 LPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINAR 362 (434)
T ss_pred EeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999975
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-71 Score=552.01 Aligned_cols=357 Identities=42% Similarity=0.690 Sum_probs=331.6
Q ss_pred HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCC
Q 014211 71 SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150 (429)
Q Consensus 71 ~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~ 150 (429)
+++++|++||+.|+.++..+|.++|++++++|++++++|++++++|+||++.+++..|+..+++.+++++..+..+.+..
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 57899999999999999999999999999999999999999999999999999865799999999999998887766543
Q ss_pred cccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEE
Q 014211 151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRV 230 (429)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~ 230 (429)
....+....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++.+++.+++|+|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a~p~g~v~~ 161 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEVAV 161 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCcCEEEE
Confidence 22211112345678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcc
Q 014211 231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQAC 310 (429)
Q Consensus 231 v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C 310 (429)
++|+.+.+..|++|+++.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|+|++.|++.+++++| .++||.|
T Consensus 162 v~g~~~~~~~l~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~-~~~GQ~C 240 (433)
T cd07134 162 FEGDAEVAQALLELPFDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKF-LNAGQTC 240 (433)
T ss_pred EeCChhHHHHHHhCCCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhh-cCcCCcc
Confidence 999878889999989999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred ccccEEEEeCCchHHHHHHHHHHHhhhhCCCC--CCCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEe
Q 014211 311 IGVDYIITTKDFAPKLIDSLRNELKEFFGKNP--MESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIA 387 (429)
Q Consensus 311 ~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~--~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~ 387 (429)
++++++|||++++++|+++|+++++.+.+++| ++++++||++++.+++++.++|+++. +|+++++||..+..|+|++
T Consensus 241 ~a~~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~g~~~~ 320 (433)
T cd07134 241 IAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQRYIA 320 (433)
T ss_pred cCCcEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCEEe
Confidence 99999999999999999999999999988885 46789999999999999999999885 5789999998766689999
Q ss_pred cEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 388 PTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 388 Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
|||+.+++++|.+++||+||||++|++|+|.+|+|+++|++
T Consensus 321 Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~ 361 (433)
T cd07134 321 PTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAK 361 (433)
T ss_pred eEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999975
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-70 Score=555.95 Aligned_cols=373 Identities=26% Similarity=0.392 Sum_probs=341.8
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhh
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE 128 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e 128 (429)
.||.||++++ .++.++.+|+++++++|++|++.|+.++..+|.++|+++++.|+++.++|++++++|+||+..++. .|
T Consensus 4 ~~P~tg~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~e 81 (453)
T cd07149 4 ISPYDGEVIG-RVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDAR-KE 81 (453)
T ss_pred cCCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHH-HH
Confidence 4559999988 777999999999999999999999999999999999999999999999999999999999999997 69
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccccc-ccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCC
Q 014211 129 ISMTKSSCKLALKELKYWTKPEKAKTS-LTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEI 207 (429)
Q Consensus 129 v~~a~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~ 207 (429)
+..+++.+++++...+.+.+....... ....+...+..++|+||+++|+|||||+...++++++||++||+||+|||+.
T Consensus 82 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~ 161 (453)
T cd07149 82 VDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQ 161 (453)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 999999999999888776543321100 0011234578899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEE
Q 014211 208 APATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVV 284 (429)
Q Consensus 208 ~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV 284 (429)
+|.++.++.+++.++ +|+|++|+++|+ .+.+..|+.|+ +|.|.||||+++++.|.+.++ ++|+++|+|||||+||
T Consensus 162 ~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~p~iV 239 (453)
T cd07149 162 TPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNAAVIV 239 (453)
T ss_pred chHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCceEEE
Confidence 999999999999999 999999999985 44589999996 999999999999999998874 7899999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhH
Q 014211 285 DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASL 363 (429)
Q Consensus 285 ~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~ 363 (429)
++|+|++.+++.+++++| +++||.|++++++|||++++++|+++|+++++++++|+|. +++++||++++.+++++.++
T Consensus 240 ~~dadl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 318 (453)
T cd07149 240 DADADLEKAVERCVSGAF-ANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEW 318 (453)
T ss_pred CCCCCHHHHHHHHHHHHH-HhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHH
Confidence 999999999999999999 9999999999999999999999999999999999999996 57899999999999999999
Q ss_pred HHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 364 LDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 364 i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++. .|+++++||.. .|+|++|||+.+++++|.+++||+||||++|++|+|++|||+++|++
T Consensus 319 i~~a~~~ga~v~~gg~~--~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 382 (453)
T cd07149 319 VEEAVEGGARLLTGGKR--DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDS 382 (453)
T ss_pred HHHHHHCCCEEEeCCCC--CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCC
Confidence 99885 57799999876 48899999999999999999999999999999999999999999974
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-70 Score=547.22 Aligned_cols=353 Identities=52% Similarity=0.855 Sum_probs=327.8
Q ss_pred HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCC
Q 014211 71 SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150 (429)
Q Consensus 71 ~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~ 150 (429)
.++++|++||+.|+.+|+.+|+++|++++++|++++++|++++++|+|||+.++...|+..+++.+++++..++.+.+..
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 48999999999999999999999999999999999999999999999999887765699999999999999888776544
Q ss_pred cccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEE
Q 014211 151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRV 230 (429)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~ 230 (429)
.........+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++++++.+.+|+|++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~~~P~gv~~v 161 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPKYFDPEAVAV 161 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHhCCCCEEEE
Confidence 22211112344678899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcc
Q 014211 231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQAC 310 (429)
Q Consensus 231 v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C 310 (429)
++|+.+.+..|++|+++.|.||||+.+++.|.+.++++++|+++|+|||||+||++|+|++.+++.+++++| .++||.|
T Consensus 162 v~g~~~~~~~l~~~~v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~-~~~GQ~C 240 (426)
T cd07087 162 VEGGVEVATALLAEPFDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKF-LNAGQTC 240 (426)
T ss_pred EeCCchHHHHHHhCCCCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHH-hccCCcc
Confidence 999777788999989999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred ccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCCCCceEecEE
Q 014211 311 IGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTI 390 (429)
Q Consensus 311 ~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~~g~~~~Ptv 390 (429)
+++++||||++++++|+++|+++++++++++|++++++||++++.+.+++.++++++ ++++||..+..|+|++|||
T Consensus 241 ~a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a----~v~~gg~~~~~g~~~~Ptv 316 (426)
T cd07087 241 IAPDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDG----KVVIGGQVDKEERYIAPTI 316 (426)
T ss_pred ccCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcc----eEEeCCccCCCCCEEeeEE
Confidence 999999999999999999999999999988888889999999999999999999865 7899997755689999999
Q ss_pred EecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 391 LLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 391 l~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+.+++++|.+++||+||||++|++|+|++|||+++|++
T Consensus 317 l~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~ 354 (426)
T cd07087 317 LDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSR 354 (426)
T ss_pred EecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCC
Confidence 99999999999999999999999999999999999975
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-70 Score=553.84 Aligned_cols=368 Identities=17% Similarity=0.196 Sum_probs=319.3
Q ss_pred eeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhH-h
Q 014211 49 RCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI-S 127 (429)
Q Consensus 49 ~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-~ 127 (429)
.||+||+++. .++.++. ++++++|++||+.|+.+++.+|.++|++++++|++++++|+++++.|+|||+.+++. +
T Consensus 70 ~~P~t~~~~~-~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~g 145 (551)
T TIGR02288 70 RSPYGVELGV-TYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAG 145 (551)
T ss_pred cCCCCCCEEE-EEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhcc
Confidence 5679999888 6667774 899999999999999999999999999999999999999999999999999988731 1
Q ss_pred ---hHHHHHHHHHHHHHHHHhhcCCCcccccccC---CCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEE
Q 014211 128 ---EISMTKSSCKLALKELKYWTKPEKAKTSLTT---YPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 201 (429)
Q Consensus 128 ---ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV 201 (429)
++.++++.++|++....++.+......+... .....+..++|+||+++|+|||||+++.++++++||++||+||
T Consensus 146 kp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VV 225 (551)
T TIGR02288 146 GPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVL 225 (551)
T ss_pred ChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEE
Confidence 7788999999999988776543321101000 1112345789999999999999999999999999999999999
Q ss_pred ecCCCCChHHHH----HHHHHHhhh-cCCCceEEecC--CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCcee
Q 014211 202 LKPSEIAPATSS----LLAKLLEDY-VDNSAVRVVEG--AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVI 273 (429)
Q Consensus 202 ~kps~~~~~~~~----~l~~~l~~a-lP~~~v~~v~~--~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~ 273 (429)
+|||+.+|+++. ++.+++.++ +|+|+||+++| +.+.++.|+.|+ ++.|.||||+.+|+.|.+.++. ++++
T Consensus 226 lKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa~--~~v~ 303 (551)
T TIGR02288 226 VKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQ--AQVY 303 (551)
T ss_pred EECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhccc--CcEE
Confidence 999999999655 567899999 99999999998 356889999997 9999999999999999998763 7999
Q ss_pred eecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCC---------chHHHHHHHHHHHhhhhCCCCC-
Q 014211 274 LELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD---------FAPKLIDSLRNELKEFFGKNPM- 343 (429)
Q Consensus 274 ~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~---------~~~~f~~~l~~~~~~~~~g~~~- 343 (429)
+|+|||||+||++|+|++.+++.+++++| .|+||.|++++|+|||++ +|++|+++|+++++++ +|+|.
T Consensus 304 lElGGknp~IV~~dADld~aa~~i~~~~f-~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~ 381 (551)
T TIGR02288 304 TEKAGVNTVIIESTDDYKAMLRNLAFSLS-LYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPAR 381 (551)
T ss_pred eecCCcCeEEEcCCCCHHHHHHHHHHHHH-hhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCccc
Confidence 99999999999999999999999999999 999999999999999999 7999999999999999 89986
Q ss_pred CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccC----CCC-ceEecEEEecCCCCCCccccCccccceeeEecCCH
Q 014211 344 ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD----EKQ-LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIV 418 (429)
Q Consensus 344 ~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~----~~g-~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~ 418 (429)
+.+++||++++.+++++.+ +...+++++||... ..| +|++|||+...+++|.+++||+||||++|++|+|.
T Consensus 382 ~~~~~Gplis~~~~~ri~~----a~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~ 457 (551)
T TIGR02288 382 ATAVLGAIQSPDTLARIAE----ARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDG 457 (551)
T ss_pred ccccccCcCCHHHHHHHHH----HHhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCH
Confidence 5789999999999999644 44344777777542 135 58899999544459999999999999999999999
Q ss_pred HHHHHHHHhh
Q 014211 419 SSAHFKLKAC 428 (429)
Q Consensus 419 ~eai~l~n~~ 428 (429)
+|||+++|++
T Consensus 458 deAi~~aN~~ 467 (551)
T TIGR02288 458 AHAVELARRS 467 (551)
T ss_pred HHHHHHHhcC
Confidence 9999999985
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-70 Score=547.62 Aligned_cols=352 Identities=28% Similarity=0.439 Sum_probs=326.5
Q ss_pred HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhc
Q 014211 68 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWT 147 (429)
Q Consensus 68 dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~ 147 (429)
|+++++++|++||+.|+.++..+|.++|+++++.|+++.++|++++++|+|||..++. .|+..+++.+++++...+++.
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~~~ 79 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAG-FNVDLAAGMLREAASLITQII 79 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999999999999999999999999988886 699999999999999887763
Q ss_pred CCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCC
Q 014211 148 KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNS 226 (429)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~ 226 (429)
+... .. ...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++ +|+|
T Consensus 80 ~~~~-~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~g 156 (432)
T cd07105 80 GGSI-PS--DKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKG 156 (432)
T ss_pred Ceec-cc--CCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCC
Confidence 3221 11 113445688999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred ceEEecCC----HHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHH
Q 014211 227 AVRVVEGA----VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGK 301 (429)
Q Consensus 227 ~v~~v~~~----~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~ 301 (429)
++|+++|+ .+.+..|++|+ ++.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|+|++.+++.+++++
T Consensus 157 v~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~ 236 (432)
T cd07105 157 VLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236 (432)
T ss_pred cEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHH
Confidence 99999974 24688999997 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC
Q 014211 302 WMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD 380 (429)
Q Consensus 302 ~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~ 380 (429)
| +|+||.|+++++||||+++|++|+++|+++++++++| ++++||++++.+++++.++++++. .|+++++||..+
T Consensus 237 ~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~ 311 (432)
T cd07105 237 F-LNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAG----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLAD 311 (432)
T ss_pred H-hcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcCC----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcC
Confidence 9 9999999999999999999999999999999999888 579999999999999999999885 577999998764
Q ss_pred --CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 381 --EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 381 --~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
..|+|++|||+.+++++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 312 ~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~ 361 (432)
T cd07105 312 ESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDS 361 (432)
T ss_pred CCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCC
Confidence 358999999999999999999999999999999999999999999975
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-70 Score=588.83 Aligned_cols=363 Identities=20% Similarity=0.313 Sum_probs=333.4
Q ss_pred eEeeeCCc-chhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhh
Q 014211 46 FSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124 (429)
Q Consensus 46 ~~~~~p~t-g~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 124 (429)
+...||+| +++++ .++.++.+|+++|+++|++||+.|+.+|+.+|+++|++++++|++++++|+.++++|+||++.++
T Consensus 661 ~~v~nPa~~~~~vg-~v~~a~~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~~~A 739 (1318)
T PRK11809 661 SPVINPADPRDIVG-YVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSNA 739 (1318)
T ss_pred EEeECCCCCCeeEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHH
Confidence 34445577 56666 56699999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecC
Q 014211 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKP 204 (429)
Q Consensus 125 ~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kp 204 (429)
. .||..++++++||+...+..+. ...++|+|||++|+|||||+.++++++++||++||+||+||
T Consensus 740 ~-~EV~eaidflryyA~~a~~~~~---------------~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KP 803 (1318)
T PRK11809 740 I-AEVREAVDFLRYYAGQVRDDFD---------------NDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKP 803 (1318)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcC---------------CceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeC
Confidence 5 7999999999999988765321 23589999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhccc------Cceeee
Q 014211 205 SEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHL------TPVILE 275 (429)
Q Consensus 205 s~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~------~~~~~e 275 (429)
|+.+|+++..++++++++ +|+|++|+++| +...+..|+.|+ |+.|.||||+++|+.|.+.+++++ +|+++|
T Consensus 804 seqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~~~pliaE 883 (1318)
T PRK11809 804 AEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAE 883 (1318)
T ss_pred CCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccCceeEEEe
Confidence 999999999999999999 99999999999 456799999997 999999999999999999988775 799999
Q ss_pred cCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCH
Q 014211 276 LGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNP 354 (429)
Q Consensus 276 ~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~ 354 (429)
+||+|++||++|||++.+++.+++|+| .++||.|++++++|||++++++|+++|++.++++++|+|. .++++||+|++
T Consensus 884 lGGkNa~IVdsdAdle~Av~~iv~sAF-~~aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~ 962 (1318)
T PRK11809 884 TGGQNAMIVDSSALTEQVVADVLASAF-DSAGQRCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDA 962 (1318)
T ss_pred cCCccceEECCCCCHHHHHHHHHHHHH-hcCCCccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999997 58999999999
Q ss_pred HHHHHHHhHHHhhhc-CCEEEeCCccC----CCCceEecEEEecCCCCCCccccCccccceeeEecC--CHHHHHHHHHh
Q 014211 355 FHFARLASLLDEDKV-SDKIVYGGQRD----EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS--IVSSAHFKLKA 427 (429)
Q Consensus 355 ~~~~~~~~~i~~a~~-~~~vl~gg~~~----~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~--~~~eai~l~n~ 427 (429)
.+.+++.++|++++. |++++.||... ..|+|++|||+.. +++.++++|+||||+.|++|+ +++|+|+++|+
T Consensus 963 ~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~ 1040 (1318)
T PRK11809 963 EAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIEQINA 1040 (1318)
T ss_pred HHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhc
Confidence 999999999999864 66777776442 3589999999974 567889999999999999996 79999999998
Q ss_pred h
Q 014211 428 C 428 (429)
Q Consensus 428 ~ 428 (429)
+
T Consensus 1041 t 1041 (1318)
T PRK11809 1041 S 1041 (1318)
T ss_pred C
Confidence 6
|
|
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-69 Score=542.38 Aligned_cols=354 Identities=25% Similarity=0.376 Sum_probs=328.2
Q ss_pred HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhc
Q 014211 68 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWT 147 (429)
Q Consensus 68 dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~ 147 (429)
|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+||+..++. .|+..+++.+++++....+..
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~-~ei~~~~~~l~~~~~~~~~~~ 79 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAA-FEVGAAIAILREAAGLPRRPE 79 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 5889999999999999999999999999999999999999999999999999999996 699999999999998876643
Q ss_pred CCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHH-HHHHHHHHhhh-cCC
Q 014211 148 KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPAT-SSLLAKLLEDY-VDN 225 (429)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~-~~~l~~~l~~a-lP~ 225 (429)
+... . ....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+ +..+.+++.++ +|+
T Consensus 80 ~~~~-~--~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~ 156 (431)
T cd07104 80 GEIL-P--SDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPK 156 (431)
T ss_pred Cccc-c--CCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCc
Confidence 3221 1 11134567899999999999999999999999999999999999999999999998 56899999999 999
Q ss_pred CceEEecCC-HHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHH
Q 014211 226 SAVRVVEGA-VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303 (429)
Q Consensus 226 ~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~ 303 (429)
+++|+++++ .+.+..|+.|+ ++.|.||||+++++.|.+.++++++|+++|+|||||+||++|+|++.+++.+++++|
T Consensus 157 gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~- 235 (431)
T cd07104 157 GVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAF- 235 (431)
T ss_pred ccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-
Confidence 999999984 45789999996 999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC
Q 014211 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE 381 (429)
Q Consensus 304 ~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~ 381 (429)
+++||.|+++++||||++++++|+++|+++++.+++|+|. +++++||++++.+.+++.++++++. .|+++++||..
T Consensus 236 ~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~-- 313 (431)
T cd07104 236 LHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY-- 313 (431)
T ss_pred hcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC--
Confidence 9999999999999999999999999999999999999996 5789999999999999999999885 57899999875
Q ss_pred CCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 382 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
.|+|++|||+.++++++.+++||+||||++|++|+|.+|||+++|++
T Consensus 314 ~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~ 360 (431)
T cd07104 314 EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDT 360 (431)
T ss_pred CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCC
Confidence 58999999999999999999999999999999999999999999975
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-70 Score=502.52 Aligned_cols=355 Identities=54% Similarity=0.906 Sum_probs=342.8
Q ss_pred HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcC
Q 014211 69 AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTK 148 (429)
Q Consensus 69 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~ 148 (429)
++..++.+|.+|.+.+..+.+.|.+.|+++..++++|.++|.+++..|.+|+..++...|+....+.++++...+++|..
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCce
Q 014211 149 PEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAV 228 (429)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v 228 (429)
++....+........++..+|.|||++|+|||||+...+.++++||+|||+||+|||+-+|.++..|++++-+.|+.+.+
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Yld~~~~ 163 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQYLDQDLI 163 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHhcCcceE
Confidence 99887666666778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCC
Q 014211 229 RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQ 308 (429)
Q Consensus 229 ~~v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq 308 (429)
.+|.|+.+.+..|++++.|.|.||||+.+|+.|+.+++++++|+++|+|||||++|++++|++-+++.|+|+++ +|+||
T Consensus 164 ~VV~Ggv~ETt~LL~~rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~-~N~GQ 242 (477)
T KOG2456|consen 164 RVVNGGVPETTELLKQRFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW-MNSGQ 242 (477)
T ss_pred EEecCCCchHHHHHHhhccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh-ccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred ccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCCCCceEec
Q 014211 309 ACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAP 388 (429)
Q Consensus 309 ~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~~g~~~~P 388 (429)
.|.+|++++++.++++.++++++..++++.+.++.++.+++.+|+..|++|+.+++++- ++|++||..|.+..|++|
T Consensus 243 tCvapDYiL~~k~~~~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~---~kv~~Gg~~d~~d~~I~P 319 (477)
T KOG2456|consen 243 TCVAPDYILCSKSIQPKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDET---GKVAIGGESDESDRYIAP 319 (477)
T ss_pred eeccCCeEEecHhhhHHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCC---CceecCCccchhhcccCC
Confidence 99999999999999999999999999999999999999999999999999999999832 899999999888899999
Q ss_pred EEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHh
Q 014211 389 TILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKA 427 (429)
Q Consensus 389 tvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~ 427 (429)
||+.+++.++++|+||+||||++|+.|++++|+|+.||+
T Consensus 320 TIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~ 358 (477)
T KOG2456|consen 320 TILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINE 358 (477)
T ss_pred eEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhc
Confidence 999999999999999999999999999999999999986
|
|
| >KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-70 Score=502.69 Aligned_cols=412 Identities=26% Similarity=0.407 Sum_probs=382.1
Q ss_pred hhhhhhc-ccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCC
Q 014211 8 AFQDFST-GAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTK 86 (429)
Q Consensus 8 ~~~~~~~-~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~ 86 (429)
..+||++ +.++++.+||+-+....+ -.++++++|++|+||+.++ .+|..++.|+++.|..|++|+++|.+.
T Consensus 34 ~~~~~~~~~~~~~~n~~~~~~~~~~~-------~~~~~~vqCycPatg~yLG-~fp~~~~tdide~v~la~kAQktW~~s 105 (583)
T KOG2454|consen 34 DASDVLAHGKDTEENSFIYIPPRGRS-------QQSDKKVQCYCPATGKYLG-YFPALSPTDIDERVTLARKAQKTWAQS 105 (583)
T ss_pred CHHHhccCCCchhhcCeeecCCCCCC-------cCCCCceEEecCCCcceee-ecccCChhhHHHHHHHHHHHHhhhhhc
Confidence 4578888 999999999987322222 2234669999999999999 899999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEE
Q 014211 87 SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEII 166 (429)
Q Consensus 87 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (429)
+.+.|.++|+.+.+.|-+|+|.+++..++|+||+..++.++||.-+++.+.|.+...++|++++..+.........+++.
T Consensus 106 sF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~ 185 (583)
T KOG2454|consen 106 SFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVE 185 (583)
T ss_pred cHHHHHHHHHHHHHHHhhchhheeeeeecccCchhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999887665555555678999
Q ss_pred eecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-----cCCCceEEecCCHHHHHHH
Q 014211 167 SEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-----VDNSAVRVVEGAVAETSAL 241 (429)
Q Consensus 167 ~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-----lP~~~v~~v~~~~~~~~~L 241 (429)
++|+||++.|.|||||+...+.+++.||.+||++|+|-|+.+.++.....++++.+ -|+++||++++-++.++.|
T Consensus 186 yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~l 265 (583)
T KOG2454|consen 186 YEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEAL 265 (583)
T ss_pred EeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHh
Confidence 99999999999999999999999999999999999999999999988877776654 5999999999978899999
Q ss_pred HhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeC
Q 014211 242 LEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320 (429)
Q Consensus 242 ~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~ 320 (429)
.+|+ ++.+.|.||..+++.|.+.+++.++|+++|+|||.++||++|+|+++.+.-++++.| ..+||.|.+.+|++||+
T Consensus 266 tSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtf-QSsGQNCiGiER~iv~k 344 (583)
T KOG2454|consen 266 TSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLELGGKDAFIICDDADLSHVASIAMRGTF-QSSGQNCIGIERFIVHK 344 (583)
T ss_pred hcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEeecCcccEEEeccccHHHHHHHHHhhhh-hhcCCcccceeEEEEec
Confidence 9997 999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred CchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhc-CCEEEeCCcc-----CCCCceEecEEEec
Q 014211 321 DFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQR-----DEKQLKIAPTILLD 393 (429)
Q Consensus 321 ~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~vl~gg~~-----~~~g~~~~Ptvl~~ 393 (429)
++|+.|+..|.+++++++.|.|. ...+||.+++..+++.++++++||.. |+++++||.+ ...|.|++||++.+
T Consensus 345 ~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvd 424 (583)
T KOG2454|consen 345 DIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVD 424 (583)
T ss_pred chHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEe
Confidence 99999999999999999999886 57899999999999999999999974 7899999985 34689999999999
Q ss_pred CCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 394 VPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 394 ~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++|.+++||.||||+.|+++++.|++|+++|.+
T Consensus 425 vt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s 459 (583)
T KOG2454|consen 425 VTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDS 459 (583)
T ss_pred cCchhhhHhhhccccchhhhhcCChHHHHhhccCC
Confidence 99999999999999999999999999999999975
|
|
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-69 Score=543.45 Aligned_cols=371 Identities=18% Similarity=0.196 Sum_probs=322.2
Q ss_pred eEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhh
Q 014211 46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125 (429)
Q Consensus 46 ~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 125 (429)
....+|.|++.++ .++.+ |++++|++|++|++.|+++++.+|.++|++++++|++++++|+++++.|+||++.++.
T Consensus 67 ~~~~~P~~~~l~~-~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~a~ 142 (549)
T cd07127 67 GGEVSPYGVELGV-TYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMMAF 142 (549)
T ss_pred eeeECCCCCcEEE-EEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHHHH
Confidence 3444558888666 44454 9999999999999999999999999999999999999999999999999999998774
Q ss_pred H----hhHHHHHHHHHHHHHHHHhhcCCCccccc-cc--CCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCC
Q 014211 126 I----SEISMTKSSCKLALKELKYWTKPEKAKTS-LT--TYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGN 198 (429)
Q Consensus 126 ~----~ev~~a~~~l~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN 198 (429)
. .|++++++.++|+++...++.+......+ .. .........++|+||+++|+|||||++..+..+++||++||
T Consensus 143 qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN 222 (549)
T cd07127 143 QAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGN 222 (549)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCC
Confidence 2 17999999999999988775443221111 00 01112345789999999999999999999999999999999
Q ss_pred eEEecCCCCChHHHH----HHHHHHhhh-cCCCceEEecCC--HHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccC
Q 014211 199 AVVLKPSEIAPATSS----LLAKLLEDY-VDNSAVRVVEGA--VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLT 270 (429)
Q Consensus 199 ~vV~kps~~~~~~~~----~l~~~l~~a-lP~~~v~~v~~~--~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~ 270 (429)
+||+|||+.+|+++. ++.++|.++ +|+|+||+++++ .+.++.|+.|+ ++.|.||||+.+|+.|.+.++. +
T Consensus 223 ~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~~--~ 300 (549)
T cd07127 223 PVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQ--A 300 (549)
T ss_pred eEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhcc--C
Confidence 999999999998864 456889998 999999999973 46789999997 9999999999999999999874 7
Q ss_pred ceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCC---------chHHHHHHHHHHHhhhhCCC
Q 014211 271 PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD---------FAPKLIDSLRNELKEFFGKN 341 (429)
Q Consensus 271 ~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~---------~~~~f~~~l~~~~~~~~~g~ 341 (429)
|+++|+||||++||++|+|++.+++.+++++| .|+||.|++++|+|||++ +|++|+++|+++++++ .|+
T Consensus 301 ~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f-~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gd 378 (549)
T cd07127 301 QVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLS-LYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LAD 378 (549)
T ss_pred cEEEecCCcCeEEECCCCCHHHHHHHHHHHHH-ccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-cCC
Confidence 99999999999999999999999999999999 999999999999999999 8999999999999999 888
Q ss_pred CC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCC----CCc-eEecEEEecCCCCCCccccCccccceeeEec
Q 014211 342 PM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE----KQL-KIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415 (429)
Q Consensus 342 ~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~----~g~-~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~ 415 (429)
|. ..+++||++++.+++++.+.++ .+++++||..+. .|+ |++|||+.+++++|.+++||+||||++|++|
T Consensus 379 p~~~~~~~Gpli~~~~~~ri~~a~~----~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~ 454 (549)
T cd07127 379 PARAAALLGAIQSPDTLARIAEARQ----LGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVAT 454 (549)
T ss_pred ccccccccCCcCCHHHHHHHHHHHh----CCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEe
Confidence 86 5789999999999999876544 445888886531 354 5699999988899999999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 014211 416 SIVSSAHFKLKAC 428 (429)
Q Consensus 416 ~~~~eai~l~n~~ 428 (429)
+|.+|+|+++|++
T Consensus 455 ~d~~eai~~an~~ 467 (549)
T cd07127 455 DSTDHSIELARES 467 (549)
T ss_pred CCHHHHHHHHHhc
Confidence 9999999999975
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-69 Score=584.19 Aligned_cols=363 Identities=20% Similarity=0.325 Sum_probs=332.4
Q ss_pred eEeeeCCc-chhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhh
Q 014211 46 FSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124 (429)
Q Consensus 46 ~~~~~p~t-g~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 124 (429)
+..+||+| +++++ .++.++.+|+++|+++|++||+.|+.+|+.+|+++|++++++|++++++|++++++|+||++.++
T Consensus 569 ~~v~nP~~~~~~vg-~v~~a~~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~~ea 647 (1208)
T PRK11905 569 RPVLNPADHDDVVG-TVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLANA 647 (1208)
T ss_pred eeEECCCCCCceEE-EEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 44455588 77777 66699999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecC
Q 014211 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKP 204 (429)
Q Consensus 125 ~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kp 204 (429)
. .|+..+++.++||+...+.+... ..++|+||+++|+|||||+...++++++||++||+||+||
T Consensus 648 ~-~Ev~eaid~lr~ya~~a~~~~~~---------------~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KP 711 (1208)
T PRK11905 648 I-AEVREAVDFLRYYAAQARRLLNG---------------PGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKP 711 (1208)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcCC---------------ceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeC
Confidence 5 79999999999999988765321 2467999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcc---cCceeeecCC
Q 014211 205 SEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKH---LTPVILELGG 278 (429)
Q Consensus 205 s~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~---~~~~~~e~~G 278 (429)
|+.+|+++..+.+++.++ +|+|++|+|+|+ .+.+..|++|+ ++.|.||||+++++.|.+.++.+ .+|+++|+||
T Consensus 712 se~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGG 791 (1208)
T PRK11905 712 AEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGG 791 (1208)
T ss_pred CcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCC
Confidence 999999999999999999 999999999994 45899999997 99999999999999999998876 4899999999
Q ss_pred CCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHH
Q 014211 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHF 357 (429)
Q Consensus 279 ~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~ 357 (429)
||++||++|||++.+++.+++|+| .++||.|++++++|||++++++|+++|+++++++++|+|. .++++||+|++.++
T Consensus 792 kN~~IV~~dAdle~Av~~iv~saF-~~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~vGdP~d~~t~~GPvId~~a~ 870 (1208)
T PRK11905 792 QNAMIVDSSALPEQVVADVIASAF-DSAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQ 870 (1208)
T ss_pred cCeEEEcCCCCHHHHHHHHHHHHH-hcCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcCCCchhccCCccCccCHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999996 48899999999999
Q ss_pred HHHHhHHHhhhcCC-EEEeCCccC--CCCceEecEEEecCCCCCCccccCccccceeeEecC--CHHHHHHHHHhh
Q 014211 358 ARLASLLDEDKVSD-KIVYGGQRD--EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS--IVSSAHFKLKAC 428 (429)
Q Consensus 358 ~~~~~~i~~a~~~~-~vl~gg~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~--~~~eai~l~n~~ 428 (429)
+++.++|+++...+ .++.|+... ..|+|+.|||+.. +++.++++|+||||++|++|+ +++|+|+++|++
T Consensus 871 ~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~--~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t 944 (1208)
T PRK11905 871 ANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEI--DSISDLEREVFGPVLHVVRFKADELDRVIDDINAT 944 (1208)
T ss_pred HHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEec--CChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcC
Confidence 99999999987655 555554322 3589999999973 568889999999999999997 699999999975
|
|
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-68 Score=526.58 Aligned_cols=329 Identities=26% Similarity=0.411 Sum_probs=305.5
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEE
Q 014211 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVL 174 (429)
Q Consensus 95 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 174 (429)
|++++++|++++++|++++++|+|||+.++. .|+..+++.+++++.+.+.+.+..... ...+...++.++|+|||+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~ 76 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQS---DRPGENILLFKRALGVTT 76 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccCC---CCCCceeEEEEecccEEE
Confidence 5789999999999999999999999999997 699999999999999887765433211 112345788999999999
Q ss_pred EEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEE
Q 014211 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILY 251 (429)
Q Consensus 175 ~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~f 251 (429)
+|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++| +.+.+..|+.|+ ++.|.|
T Consensus 77 ~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~f 156 (409)
T PRK10090 77 GILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSM 156 (409)
T ss_pred EECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999998 566789999987 999999
Q ss_pred eCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHH
Q 014211 252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR 331 (429)
Q Consensus 252 tGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 331 (429)
|||+.+|+.|.+.++.+++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++++|||++++++|+++|+
T Consensus 157 tGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f-~~~GQ~C~a~~rv~V~~~i~~~f~~~l~ 235 (409)
T PRK10090 157 TGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLG 235 (409)
T ss_pred ECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHH-HhcCCCCCCCeEEEEcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHhhhhCCCCC-C-CCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC-CCceEecEEEecCCCCCCccccCccc
Q 014211 332 NELKEFFGKNPM-E-SKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFG 407 (429)
Q Consensus 332 ~~~~~~~~g~~~-~-~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fg 407 (429)
+++++++.|+|. + ++++||++++.+++++.++|+++. .|+++++||..+. .|+|++|||+.+++++|++++||+||
T Consensus 236 ~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~Fg 315 (409)
T PRK10090 236 EAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFG 315 (409)
T ss_pred HHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCC
Confidence 999999999996 4 789999999999999999999986 5789999997643 57899999999999999999999999
Q ss_pred cceeeEecCCHHHHHHHHHhh
Q 014211 408 PLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 408 Pv~~v~~~~~~~eai~l~n~~ 428 (429)
||++|++|+|.+|||+++|++
T Consensus 316 Pvl~v~~~~~~~eai~~~n~~ 336 (409)
T PRK10090 316 PVLPVVAFDTLEEAIAMANDS 336 (409)
T ss_pred ceEEEEEECCHHHHHHHHhCC
Confidence 999999999999999999976
|
|
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-66 Score=515.46 Aligned_cols=333 Identities=16% Similarity=0.184 Sum_probs=288.9
Q ss_pred HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHH--HHHHHHHHHhh
Q 014211 69 AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSS--CKLALKELKYW 146 (429)
Q Consensus 69 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~--l~~~~~~~~~~ 146 (429)
+++|+++|++||+.|+.+|+.+|.++|++++++|++++++|++++++|+|||+.+++ .++..++.. .++++. .
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~-~~~~~~~~~~~~~~~~~---~- 75 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDK-VIKNHFAAEYIYNVYKD---E- 75 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHH-HHHHHHHHHHHHHHHhc---c-
Confidence 478999999999999999999999999999999999999999999999999999886 355444432 222221 1
Q ss_pred cCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHh----hh
Q 014211 147 TKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----DY 222 (429)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~----~a 222 (429)
......+ ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++. ++
T Consensus 76 ~~~~~~~---~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~a 152 (439)
T cd07081 76 KTCGVLT---GDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAA 152 (439)
T ss_pred ccCceec---CCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHc
Confidence 1111111 1113346889999999999999999999999999999999999999999999999999888885 56
Q ss_pred -cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHH
Q 014211 223 -VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIA 299 (429)
Q Consensus 223 -lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~ 299 (429)
+|+|++|+++| +.+.++.|++|+ |+.|.||||+. +.+.++++++|+++|+|||||+||++|||++.|++.+++
T Consensus 153 G~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~ 228 (439)
T cd07081 153 GAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVK 228 (439)
T ss_pred CCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHH
Confidence 99999999998 667889999997 99999999987 566777889999999999999999999999999999999
Q ss_pred HHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCcc
Q 014211 300 GKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQR 379 (429)
Q Consensus 300 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~ 379 (429)
++| +++||.|++.+|+|||+++|++|+++|+++. ||+++..+++++.++|+++...+..+.||..
T Consensus 229 ~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~--------------gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~ 293 (439)
T cd07081 229 SKT-FDNGVICASEQSVIVVDSVYDEVMRLFEGQG--------------AYKLTAEELQQVQPVILKNGDVNRDIVGQDA 293 (439)
T ss_pred HHh-cCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC--------------CccCCHHHHHHHHHHHHhcCCcCCcccCCCH
Confidence 999 9999999999999999999999999999863 8999999999999999998764434455532
Q ss_pred ----CCCCceEecE---EEecCC--CCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 380 ----DEKQLKIAPT---ILLDVP--DDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 380 ----~~~g~~~~Pt---vl~~~~--~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
...|+|++|| ++.+++ ++|.+++||+||||++|++|+|+||||+++|++
T Consensus 294 ~~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~ 351 (439)
T cd07081 294 YKIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALAL 351 (439)
T ss_pred HHHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHH
Confidence 1258899998 998888 999999999999999999999999999999975
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-65 Score=516.87 Aligned_cols=349 Identities=20% Similarity=0.267 Sum_probs=307.8
Q ss_pred HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHh--h
Q 014211 69 AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY--W 146 (429)
Q Consensus 69 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~--~ 146 (429)
+++|+++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++..+++ |
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~-~ev~~~~~~l~~~a~~~~~~~~ 79 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQ-GELGRTTGQLRLFADLVREGSW 79 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHH-HHHHHHHHHHHHHHHHHHhcCC
Confidence 478999999999999999999999999999999999999999999999999999886 6999999999999988764 2
Q ss_pred cCCCcccccc---cCCCCcceEEeecceEEEEEcCCchhhhh--hhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHh-
Q 014211 147 TKPEKAKTSL---TTYPSSAEIISEPLGVVLVISTWNYPFLL--SLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE- 220 (429)
Q Consensus 147 ~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~--~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~- 220 (429)
.+........ ...+...++.++|+|||++|+|||||+.. .++++++||++||+||+|||+.+|.++.++++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~ 159 (454)
T cd07129 80 LDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRA 159 (454)
T ss_pred ccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHH
Confidence 2222111100 01123457889999999999999999987 45899999999999999999999999999988775
Q ss_pred ---hh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhc--ccCceeeecCCCCcEEEcCCC---C
Q 014211 221 ---DY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAK--HLTPVILELGGKSPAVVDSTI---N 289 (429)
Q Consensus 221 ---~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~--~~~~~~~e~~G~~~~iV~~da---d 289 (429)
++ +|+|+||+|+| +.+.+..|++|+ ++.|.||||+.+|+.|.+.+++ +++|+++|+|||||+||++|+ |
T Consensus 160 ~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~d 239 (454)
T cd07129 160 ALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAER 239 (454)
T ss_pred HHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHH
Confidence 66 99999999999 557889999997 9999999999999999999997 699999999999999999999 8
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccEEEEeCC-chHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhh
Q 014211 290 LQVTTRRIIAGKWMANNGQACIGVDYIITTKD-FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK 368 (429)
Q Consensus 290 l~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 368 (429)
++.+++.+++++| .|+||.|+++++||||++ ++++|+++|+++++++++| |++++...++..++|+++.
T Consensus 240 l~~aa~~i~~~~~-~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g---------~~~~~~~~~~~~~~i~~a~ 309 (454)
T cd07129 240 GEAIAQGFVGSLT-LGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPAQ---------TMLTPGIAEAYRQGVEALA 309 (454)
T ss_pred HHHHHHHHHHHHh-cCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCCC---------CCcChHHHHHHHHHHHHHH
Confidence 9999999999999 999999999999999999 9999999999999988654 5566666667777777764
Q ss_pred -c-CCEEEeCCccCCCCceEecEEEecCC---CCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 369 -V-SDKIVYGGQRDEKQLKIAPTILLDVP---DDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 369 -~-~~~vl~gg~~~~~g~~~~Ptvl~~~~---~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
. |+++++||..+.+|+|++|||+...+ ++|.+++||+||||++|++|+|.+|+|+++|++
T Consensus 310 ~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~ 374 (454)
T cd07129 310 AAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEAL 374 (454)
T ss_pred hcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcC
Confidence 3 67999999765568999999998655 689999999999999999999999999999975
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-66 Score=515.98 Aligned_cols=346 Identities=18% Similarity=0.220 Sum_probs=308.1
Q ss_pred HHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhc-C
Q 014211 70 ASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWT-K 148 (429)
Q Consensus 70 ~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~-~ 148 (429)
++|+++|++||+.|+++++.+|.++|+++++.|++++++|++++++|+|||+ ++. .|+..+++.+++++...+.+. .
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~-~ev~~~i~~~~~~~~~~~~~~~~ 79 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFA-ENICGDQVQLRARAFVIYSYRIP 79 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhh-hhhcchHHHHHHHHHHHHhcccc
Confidence 6899999999999999999999999999999999999999999999999999 654 699999999999998886531 1
Q ss_pred CCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-c-CCC
Q 014211 149 PEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V-DNS 226 (429)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-l-P~~ 226 (429)
...........+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ + |++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g 159 (442)
T cd07084 80 HEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPE 159 (442)
T ss_pred ccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCcc
Confidence 11111111111345788999999999999999999999999999999999999999999999999999999999 6 999
Q ss_pred ceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCC-CHHHHHHHHHHHHHHh
Q 014211 227 AVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTI-NLQVTTRRIIAGKWMA 304 (429)
Q Consensus 227 ~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~da-dl~~aa~~i~~~~~~~ 304 (429)
++++++|+.+.+..|+.|+ ++.|.||||+++++.|.+.++. +|+++|+|||||+||++|+ |++.+++.+++++| .
T Consensus 160 ~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~-~ 236 (442)
T cd07084 160 DVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMT-A 236 (442)
T ss_pred ceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHh-c
Confidence 9999999656888999997 9999999999999999998875 8999999999999999999 69999999999999 9
Q ss_pred cCCCccccccEEEEeCC-chHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhc--CCEEEeCCccC-
Q 014211 305 NNGQACIGVDYIITTKD-FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV--SDKIVYGGQRD- 380 (429)
Q Consensus 305 ~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~--~~~vl~gg~~~- 380 (429)
++||.|++++++|||++ ++++|+++|+++++++++| ++++||++++... ++|+++.. |+++++||...
T Consensus 237 ~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g----~~~~gpl~~~~~~----~~i~~a~~~gga~~~~gg~~~~ 308 (442)
T cd07084 237 CSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE----DLLLGPVQTFTTL----AMIAHMENLLGSVLLFSGKELK 308 (442)
T ss_pred ccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC----ccccChhhhHHHH----HHHHHHHhcCCcEEEeCCcccc
Confidence 99999999999999999 9999999999999999988 6789999876544 44555433 47899998752
Q ss_pred ------CCCceEecEEEecCCCCC---CccccCccccceeeEecCC--HHHHHHHHHhh
Q 014211 381 ------EKQLKIAPTILLDVPDDS---TIMKEEIFGPLLPIVTVSI--VSSAHFKLKAC 428 (429)
Q Consensus 381 ------~~g~~~~Ptvl~~~~~~~---~~~~~E~fgPv~~v~~~~~--~~eai~l~n~~ 428 (429)
..|+|++|||+.+++++| .+++||+||||++|++|+| .+|+|+++|++
T Consensus 309 ~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~ 367 (442)
T cd07084 309 NHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERM 367 (442)
T ss_pred cCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhC
Confidence 148999999999999987 9999999999999999999 99999999975
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-65 Score=504.21 Aligned_cols=334 Identities=20% Similarity=0.255 Sum_probs=291.7
Q ss_pred HHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhh
Q 014211 67 EKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYW 146 (429)
Q Consensus 67 ~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~ 146 (429)
+|+++|+++|++||+.|+.++..+|.++|+++++.|+++.++|++++++|+|||..++. ++.+++++......
T Consensus 4 ~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~-------~~~~~~~~~~~~~~ 76 (429)
T cd07121 4 ATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK-------IAKNHLAAEKTPGT 76 (429)
T ss_pred hhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH-------HHHHHHHHHhcCcc
Confidence 69999999999999999999999999999999999999999999999999999987763 35566665432111
Q ss_pred cCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHh----hh
Q 014211 147 TKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----DY 222 (429)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~----~a 222 (429)
. ..............++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++++ ++
T Consensus 77 ~--~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~a 154 (429)
T cd07121 77 E--DLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEA 154 (429)
T ss_pred c--ccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHc
Confidence 0 00000000112345788999999999999999999999999999999999999999999999999999885 55
Q ss_pred -cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHH
Q 014211 223 -VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIA 299 (429)
Q Consensus 223 -lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~ 299 (429)
+|+|++|+++| +.+.++.|++|+ ||.|.||||+.+|+.+.+. .+|+++|+|||||+||++|||++.|++.+++
T Consensus 155 GlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~ 230 (429)
T cd07121 155 GGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDIVQ 230 (429)
T ss_pred CCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHHHh
Confidence 89999999998 567889999997 9999999999999999875 4899999999999999999999999999999
Q ss_pred HHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhc---CCEEEeC
Q 014211 300 GKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV---SDKIVYG 376 (429)
Q Consensus 300 ~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~---~~~vl~g 376 (429)
++| +|+||.|++++++|||+++|++|+++|+++ . .+++++.+.+++.++++++.. +++++.|
T Consensus 231 ~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~-------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~g 295 (429)
T cd07121 231 GAS-FDNNLPCIAEKEVIAVDSVADYLIAAMQRN-G-------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVG 295 (429)
T ss_pred ccc-ccCCCCCCccceEEEeHHHHHHHHHHHHHC-C-------------CEEcCHHHHHHHHHhhcccCCCccccccccC
Confidence 999 999999999999999999999999999886 1 147889999999999998865 4688888
Q ss_pred Ccc----CCCCceEe---cEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 377 GQR----DEKQLKIA---PTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 377 g~~----~~~g~~~~---Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
|.. +..|.|++ |||+.+++++|++++||+||||++|++|+|++|||+++|++
T Consensus 296 g~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~ 354 (429)
T cd07121 296 KDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVEL 354 (429)
T ss_pred cCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhh
Confidence 753 22478877 59999999999999999999999999999999999999975
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-63 Score=500.45 Aligned_cols=354 Identities=30% Similarity=0.466 Sum_probs=330.0
Q ss_pred HHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCC
Q 014211 70 ASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKP 149 (429)
Q Consensus 70 ~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~ 149 (429)
+++++.|++|++.|+.++..+|.++|+++++.|.++.++|++++++|+||+..++. .|+..+++.+++++...+++.+.
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~-~ei~~~i~~l~~~~~~~~~~~~~ 79 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLHGE 79 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCc
Confidence 36899999999999999999999999999999999999999999999999988875 69999999999999988887665
Q ss_pred CcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCce
Q 014211 150 EKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAV 228 (429)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v 228 (429)
... ....+...+.+++|+||+++|.|||+|+...++.+++||++||+||+|||+.+|.++..+.++|.++ +|++++
T Consensus 80 ~~~---~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~ 156 (432)
T cd07078 80 VIP---SPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVL 156 (432)
T ss_pred ccc---ccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcE
Confidence 431 1223567789999999999999999999999999999999999999999999999999999999999 899999
Q ss_pred EEecCCHH-HHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcC
Q 014211 229 RVVEGAVA-ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANN 306 (429)
Q Consensus 229 ~~v~~~~~-~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~ 306 (429)
++++|+.+ .+..|+.|+ ++.|.||||..+++.|.+.++++++|+++|+||+|++||++++|++.+++.+++++| .++
T Consensus 157 ~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~-~~~ 235 (432)
T cd07078 157 NVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAF-GNA 235 (432)
T ss_pred EEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHH-hcc
Confidence 99998544 788899996 899999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC--C
Q 014211 307 GQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE--K 382 (429)
Q Consensus 307 Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~--~ 382 (429)
||.|++++++|||++++++|+++|+++++++++|+|. +++++||++++.+.+++.++++++. .++++++||..+. .
T Consensus 236 Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~ 315 (432)
T cd07078 236 GQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGK 315 (432)
T ss_pred CCCccCCceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCC
Confidence 9999999999999999999999999999999999995 6889999999999999999999886 5779999987654 4
Q ss_pred CceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 383 QLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 383 g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
|+|++|||+.++++++.++++|+||||++|++|++.+|||+++|++
T Consensus 316 g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~ 361 (432)
T cd07078 316 GYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDT 361 (432)
T ss_pred CcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCC
Confidence 8999999999999999999999999999999999999999999874
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-64 Score=502.47 Aligned_cols=336 Identities=19% Similarity=0.225 Sum_probs=293.3
Q ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHH
Q 014211 63 RFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142 (429)
Q Consensus 63 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~ 142 (429)
....+|+++++++|++||+.|+.++..+|.++|+++++.|+++.++|++++++|+||+..+++. +.+++++..
T Consensus 32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-------~~~~~~~~~ 104 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-------AKNVAAAEK 104 (465)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-------HHHHHHHHH
Confidence 4677899999999999999999999999999999999999999999999999999999988753 345555554
Q ss_pred HH--hhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHh
Q 014211 143 LK--YWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE 220 (429)
Q Consensus 143 ~~--~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~ 220 (429)
.. .+...... ...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 105 ~~~~~~~~~~~~----~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~ 180 (465)
T PRK15398 105 TPGVEDLTTEAL----TGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLN 180 (465)
T ss_pred hccccccccCcc----cCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHH
Confidence 32 11111100 1123456788999999999999999999999999999999999999999999999999999887
Q ss_pred ----hh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHH
Q 014211 221 ----DY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVT 293 (429)
Q Consensus 221 ----~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~a 293 (429)
++ +|+|++|++++ +.+.+..|++|+ +|.|.||||+++|+.|.+ ..+|+++|+|||||+||++|||++.|
T Consensus 181 ~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~A 256 (465)
T PRK15398 181 EAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKA 256 (465)
T ss_pred HHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHH
Confidence 46 89999999998 667889999997 999999999999999988 35899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhh-cCCE
Q 014211 294 TRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK-VSDK 372 (429)
Q Consensus 294 a~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~ 372 (429)
++.+++++| +|+||.|+++++||||+++|++|+++|+++ .+|++++.+++++.++++++. .+++
T Consensus 257 a~~i~~g~~-~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~--------------~~~li~~~~~~~v~~~l~~~~~~~~~ 321 (465)
T PRK15398 257 ARDIVKGAS-FDNNLPCIAEKEVIVVDSVADELMRLMEKN--------------GAVLLTAEQAEKLQKVVLKNGGTVNK 321 (465)
T ss_pred HHHHHHhcc-cCCCCcCCCCceEEEeHHHHHHHHHHHHHc--------------CCccCCHHHHHHHHHHHhhcccccch
Confidence 999999999 999999999999999999999999999986 127899999999999999654 3446
Q ss_pred EEeCCcc----CCCCceE---ecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 373 IVYGGQR----DEKQLKI---APTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 373 vl~gg~~----~~~g~~~---~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++.||.. +..|+|+ +|||+.+++++|++++||+||||++|++|+|++|||+++|++
T Consensus 322 ~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~ 384 (465)
T PRK15398 322 KWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKL 384 (465)
T ss_pred hhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhc
Confidence 6666542 2246666 489999999999999999999999999999999999999875
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-62 Score=485.89 Aligned_cols=334 Identities=18% Similarity=0.179 Sum_probs=288.8
Q ss_pred HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHH-HHHHHHHHHHhhc
Q 014211 69 AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKS-SCKLALKELKYWT 147 (429)
Q Consensus 69 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~-~l~~~~~~~~~~~ 147 (429)
+++|+++|++||+.|+.+|..+|.++|++++++|++++++|++++++|+|||+.+++..|+..+++ .+++++.. +..
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 478999999999999999999999999999999999999999999999999999987447777777 67777652 211
Q ss_pred CCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHh----hh-
Q 014211 148 KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----DY- 222 (429)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~----~a- 222 (429)
+. . . ...+...++.++|+||+++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++. ++
T Consensus 79 g~-~---~-~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG 153 (436)
T cd07122 79 GV-I---E-EDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153 (436)
T ss_pred ee-e---c-cCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcC
Confidence 11 1 0 1123456889999999999999999999999999999999999999999999999999888875 56
Q ss_pred cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHH
Q 014211 223 VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAG 300 (429)
Q Consensus 223 lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~ 300 (429)
+|+|++|+++| +.+.+..|++|+ ++.|.||||+.++ +.++++++|+++|+|||||+||++|||++.|++.++++
T Consensus 154 ~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~----~~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~ 229 (436)
T cd07122 154 APEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMV----KAAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILS 229 (436)
T ss_pred CCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHH----HHHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 99999999998 667889999997 9999999999865 44567789999999999999999999999999999999
Q ss_pred HHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhh-------hCCCC-C-CCCcccccCCHHHHHHHHhHHHhhhc-C
Q 014211 301 KWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF-------FGKNP-M-ESKDLSRIVNPFHFARLASLLDEDKV-S 370 (429)
Q Consensus 301 ~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~-------~~g~~-~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~ 370 (429)
+| +|+||.|++++++|||+++|++|+++|+++...+ +++++ . +++.+||+++..+.+++..++..+.. +
T Consensus 230 ~f-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~g 308 (436)
T cd07122 230 KT-FDNGTICASEQSVIVDDEIYDEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPED 308 (436)
T ss_pred hh-ccCCCCCCCCCEEEEechhHHHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCC
Confidence 99 9999999999999999999999999999998876 66776 2 46789999988888877777665533 4
Q ss_pred CEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 371 DKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 371 ~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++.|| +.+++++|+++ +|.||||++|++|+|.+|||+++|++
T Consensus 309 a~vl~~~-------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~ 352 (436)
T cd07122 309 TKVLVAE-------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKAREL 352 (436)
T ss_pred CeEEEEe-------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHH
Confidence 4555544 45778899987 56799999999999999999999985
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-61 Score=484.80 Aligned_cols=341 Identities=18% Similarity=0.163 Sum_probs=298.1
Q ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHH
Q 014211 63 RFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142 (429)
Q Consensus 63 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~ 142 (429)
..+.+|+++++++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+||+..+++..+...+...+.+++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 46788999999999999999999999999999999999999999999999999999999887643444566666665543
Q ss_pred HHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHH----
Q 014211 143 LKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKL---- 218 (429)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~---- 218 (429)
.+. .+ .. ....+...+..++|+|||++|.|||||+....+++++||++||+||+|||+.+|.++..++++
T Consensus 84 ~~~-~G-~~----~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~ 157 (488)
T TIGR02518 84 MKT-IG-IL----SEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKA 157 (488)
T ss_pred Ccc-cc-ee----cCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHH
Confidence 322 11 11 111234567899999999999999999999999999999999999999999999999985555
Q ss_pred Hhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHH
Q 014211 219 LEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTR 295 (429)
Q Consensus 219 l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~ 295 (429)
+.++ +|+|+||++++ +.+.++.|++|+ +|.|.||||+..+ +.++.+++|+++|+|||+|+||++|||++.|++
T Consensus 158 l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~----~~a~~~~~pv~~e~gGn~p~iV~~dADld~Aa~ 233 (488)
T TIGR02518 158 AEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMV----KAAYSSGTPAIGVGPGNGPAYIERTANVKKAVR 233 (488)
T ss_pred HHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHH----HHHHHcCCCEEEEcCCCCeEEEeCCCCHHHHHH
Confidence 4677 99999999998 678899999997 9999999999965 444556799999999999999999999999999
Q ss_pred HHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH-------HhhhhCCCC-C-CCCcccccCCHHHHHHHHhHHHh
Q 014211 296 RIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE-------LKEFFGKNP-M-ESKDLSRIVNPFHFARLASLLDE 366 (429)
Q Consensus 296 ~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~-------~~~~~~g~~-~-~~~~~gpl~~~~~~~~~~~~i~~ 366 (429)
.+++++| +++||.|++.++||||+++|++|+++|+++ .+.+++|+| . +.+++||+++..+++++.+++++
T Consensus 234 ~iv~sk~-~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~ 312 (488)
T TIGR02518 234 DIIDSKT-FDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGL 312 (488)
T ss_pred HHHHHHh-cCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhcc
Confidence 9999999 999999999999999999999999999998 889999986 4 57899999999999999999999
Q ss_pred hh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 367 DK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 367 a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+. .|+++++||.. .+++++++ ++|+||||++|++|+|++|||+++|++
T Consensus 313 av~~gakll~gg~~-------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~ 361 (488)
T TIGR02518 313 TVPEDAKVLIGEQN-------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIEL 361 (488)
T ss_pred ccCCCCEEEEeCCC-------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHh
Confidence 86 47899999853 24567775 799999999999999999999999874
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-62 Score=464.03 Aligned_cols=368 Identities=20% Similarity=0.314 Sum_probs=331.7
Q ss_pred CccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 014211 34 THISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAI 113 (429)
Q Consensus 34 ~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~ 113 (429)
.|...|++|| +.-+.+-.++.+++++|+++|++.|.+|++.|..+|+.+|+.+|++++++|+.+..+|..++
T Consensus 125 ~g~~~pV~nP--------ad~~dvVG~V~ea~~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~ 196 (769)
T COG4230 125 GGEPRPVINP--------ADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLL 196 (769)
T ss_pred CCCcccccCC--------CCHhHCeeeeeecCHHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666788888 44343333555999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHH
Q 014211 114 HKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGA 193 (429)
Q Consensus 114 ~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~A 193 (429)
++|-||++..+ +.||..++++||||+.+.+.-++. ...+|+|++++|+|||||+.++..+++.|
T Consensus 197 ~REAGKtl~na-IAEVREAVDFlrYYA~~ar~~~g~---------------~~~~~~G~vVcISPWNFPLAIFtGqiaAA 260 (769)
T COG4230 197 VREAGKTLSNA-IAEVREAVDFLRYYAGQARDTFGN---------------LTHRPLGPVVCISPWNFPLAIFTGQIAAA 260 (769)
T ss_pred HHHhccchhhH-HHHHHHHHHHHHHHHHHHhcccCc---------------cccCCCCcEEEECCCCchHHHHHhHHHHH
Confidence 99999999999 689999999999999998763321 23678999999999999999999999999
Q ss_pred HhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCH-HHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcc--
Q 014211 194 IAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKH-- 268 (429)
Q Consensus 194 LaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~-~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~-- 268 (429)
|++||+|+.||.+++|+.+..-.++++++ +|.+++|+++|+. ..+..|+++. +++|.||||+++++.|.++.+++
T Consensus 261 L~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~li~~~LA~r~g 340 (769)
T COG4230 261 LAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQG 340 (769)
T ss_pred HHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999 9999999999955 5899999996 99999999999999999998863
Q ss_pred -cCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCC-CC
Q 014211 269 -LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SK 346 (429)
Q Consensus 269 -~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~-~~ 346 (429)
..|++.|.||.|.+||+.+|--|.++.+++.|+| -.+||+|++.+.+++++++.+..+++|+..+.++++|+|+. .+
T Consensus 341 ~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAF-dSAGQRCSALRvLclQ~DvAd~~l~mLKGAm~el~~G~p~~l~t 419 (769)
T COG4230 341 RPIPLIAETGGQNAMIVDSSALAEQVVADVLASAF-DSAGQRCSALRVLCLQEDVADRILTMLKGAMAELRVGNPDRLTT 419 (769)
T ss_pred CCCceEeccCCcceEEeechhhHHHHHHHHHHHHh-hcccchhhhhhhhhhhhhHHHHHHHHHHHHHHHhccCCccceec
Confidence 6799999999999999999999999999999999 99999999999999999999999999999999999999985 89
Q ss_pred cccccCCHHHHHHHHhHHHhhhcCCEEEeCCccC---CCCceEecEEEecCCCCCCccccCccccceeeEecC--CHHHH
Q 014211 347 DLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD---EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS--IVSSA 421 (429)
Q Consensus 347 ~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~---~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~--~~~ea 421 (429)
|+||+|+.+....++++|+..+..++.++--..+ ..|.|+.||+++.. +-.-++.|+||||+.|++|+ ++++.
T Consensus 420 DVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~--~~~eL~rEVFGPVLHVvRy~~~~l~~v 497 (769)
T COG4230 420 DVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELE--NLDELQREVFGPVLHVVRYKRDELDEV 497 (769)
T ss_pred cccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcC--CHHHHHHHhccceeEEEEecHHHHHHH
Confidence 9999999999999999999888766655433221 46999999999653 33457899999999999996 78999
Q ss_pred HHHHHhh
Q 014211 422 HFKLKAC 428 (429)
Q Consensus 422 i~l~n~~ 428 (429)
|+-+|.+
T Consensus 498 i~~INat 504 (769)
T COG4230 498 IDQINAT 504 (769)
T ss_pred HHHHhcc
Confidence 9999875
|
|
| >KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-60 Score=438.85 Aligned_cols=405 Identities=17% Similarity=0.218 Sum_probs=356.7
Q ss_pred hhhhhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCCc-chhhhhcccCCCHHHHHHHHHHHHHHhhhhc
Q 014211 6 VRAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRK 84 (429)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~~~~~dv~~av~aA~~A~~~w~ 84 (429)
..|+++.+.+ ..+-++.||| +-+.... +....+| .. ...++ .+..+++++++.||++|.+|++.|.
T Consensus 47 ~~A~~~~~~~-~~evP~vIg~-~~v~t~~--~q~q~~P--------~~hq~~lA-~~~yA~~k~ie~AIkaAl~a~~~W~ 113 (561)
T KOG2455|consen 47 EKALKELQKR-PLEVPLVIGD-KEVYTND--EQYQVCP--------HNHQHVLA-KVYYATKKQIEKAIKAALSAQKTWE 113 (561)
T ss_pred HHHHHHHhcC-ceeccEEECC-eeeecCC--cccccCC--------chhhhhhh-heeeccHHHHHHHHHHHHhhcCccc
Confidence 4566777666 8888999999 6555422 2334444 44 34455 4448999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHH-HhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcc
Q 014211 85 TKSYEWRMSQIQSIANMIE-EKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSA 163 (429)
Q Consensus 85 ~~~~~~R~~~L~~~a~~l~-~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (429)
.+|..+|.+|++|.|++|. .++-+|....+.-.||+..++.+.-+.+.++.+|+.+..+..+...+.... ..+..+
T Consensus 114 ~~PiadR~aI~lkAAdlistkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~---~~~t~n 190 (561)
T KOG2455|consen 114 LVPIADRLAIFLKAADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQ---TKGTWN 190 (561)
T ss_pred cCcHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccc---cCCCCc
Confidence 9999999999999999998 788888888899999999999765577889999999999888776654321 346677
Q ss_pred eEEeecc-eEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHH
Q 014211 164 EIISEPL-GVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSA 240 (429)
Q Consensus 164 ~~~~~P~-Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~ 240 (429)
...++|+ |.|+.|+||||.....-...+||| +||+|+||||....++..++.++|+|+ +|+|++|+||++ +..+..
T Consensus 191 s~~yRpleGFVaAisPFnftAI~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~dt 269 (561)
T KOG2455|consen 191 SMEYRPLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGDT 269 (561)
T ss_pred ceeeccccceeEEecccceeeeccccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecce
Confidence 8889999 999999999999888777888887 899999999999999999999999999 999999999995 557888
Q ss_pred HHhcC-CCEEEEeCChHHHHHHHHHHhcc------cCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccc
Q 014211 241 LLEQK-WDKILYTGSPRVGRIVMAAAAKH------LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGV 313 (429)
Q Consensus 241 L~~~~-v~~v~ftGs~~~~~~i~~~~~~~------~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~ 313 (429)
+..++ ..++.||||..+-++++++.+.+ ..+++.|+||||..+|+++||+++++...++++| .++||.|++.
T Consensus 270 ita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAf-ey~GQkcsA~ 348 (561)
T KOG2455|consen 270 ITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAF-EYQGQKCSAC 348 (561)
T ss_pred eccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHH-hhcccccchh
Confidence 98886 99999999999999999998875 4689999999999999999999999999999999 9999999999
Q ss_pred cEEEEeCCchHHHHHHHHHHHhhhhCCCCC-C-CCcccccCCHHHHHHHHhHHHhhhcC--CEEEeCCccC-CCCceEec
Q 014211 314 DYIITTKDFAPKLIDSLRNELKEFFGKNPM-E-SKDLSRIVNPFHFARLASLLDEDKVS--DKIVYGGQRD-EKQLKIAP 388 (429)
Q Consensus 314 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~-~~~~gpl~~~~~~~~~~~~i~~a~~~--~~vl~gg~~~-~~g~~~~P 388 (429)
+|+||+++.|+.+.+.|.+.-+++++|+|. + ++.+||+|+...+.|+.++|+.++.. ..||+||++| ..|+|+.|
T Consensus 349 SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~P 428 (561)
T KOG2455|consen 349 SRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEP 428 (561)
T ss_pred hhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecc
Confidence 999999999999999999999999999984 4 78999999999999999999999754 5889999985 46999999
Q ss_pred EEEecCCCCCCccccCccccceeeEecCC--HHHHHHHHHhh
Q 014211 389 TILLDVPDDSTIMKEEIFGPLLPIVTVSI--VSSAHFKLKAC 428 (429)
Q Consensus 389 tvl~~~~~~~~~~~~E~fgPv~~v~~~~~--~~eai~l~n~~ 428 (429)
||+...+|.+++|.||+||||++|+.|+| .+|+++++.++
T Consensus 429 Tiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~t 470 (561)
T KOG2455|consen 429 TIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNT 470 (561)
T ss_pred eEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcC
Confidence 99999999999999999999999999974 79999998654
|
|
| >KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-61 Score=449.21 Aligned_cols=378 Identities=20% Similarity=0.279 Sum_probs=336.0
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQS 97 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~ 97 (429)
+++||+| +|++++++++|+++||.+ |+++. .++.++..|+++||.+|+.||. +|++++..+|.+.|++
T Consensus 422 h~~fi~g-~fv~~~~~~t~~tinp~~--------~~~ic-~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~ 491 (881)
T KOG2452|consen 422 HQLFIGG-EFVDAEGAKTSETINPTD--------GSVIC-QVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYR 491 (881)
T ss_pred HhhccCc-EeecccCCccccccCCCC--------CCeeE-EeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhh
Confidence 5899999 999999999999999944 44444 3338999999999999999997 4999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEc
Q 014211 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 177 (429)
+++++++++++|+.+.+++.|.-..-+....+...++.+||+++|++++.+..+.-...++......+.++|+|||++|.
T Consensus 492 la~lme~h~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~ 571 (881)
T KOG2452|consen 492 LADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIII 571 (881)
T ss_pred ccchhhhccchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEec
Confidence 99999999999999999999977766655678889999999999999976655443333344456788999999999999
Q ss_pred CCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEEecCCHH-HHHHHHhcC-CCEEEEeCCh
Q 014211 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVA-ETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 178 p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~v~~~~~-~~~~L~~~~-v~~v~ftGs~ 255 (429)
|||||+..+.|+.+.+|++- ++|..+ -.|++|+++|+.+ .++.|..|| |..+.||||+
T Consensus 572 pwnyplmmlswk~aaclaa~---~~k~~e-----------------~sgvini~~gsgslvg~rls~hpdvrkigftgst 631 (881)
T KOG2452|consen 572 PWNYPLMMLSWKTAACLAAQ---VLKFAE-----------------LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGST 631 (881)
T ss_pred cCCchHHHHHHHHHHHHHHH---Hhhhhh-----------------hcceEEEecCCcchhccccccCCccceeccccch
Confidence 99999999999999988764 122211 2589999999655 689999997 9999999999
Q ss_pred HHHHHHHHHHhc-ccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHH
Q 014211 256 RVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334 (429)
Q Consensus 256 ~~~~~i~~~~~~-~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~ 334 (429)
+.|..+++.|+. +.+++.+|+||++|+||+.|+|+++|++.-..+.| ++-|..|.+..|+||..++.++|+.++++.+
T Consensus 632 eig~~im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vf-f~kgenciaagr~fi~~sihd~fv~~~vee~ 710 (881)
T KOG2452|consen 632 EVGKHIMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVF-FSKGENCIAAGRLFVEDSIHDEFVRRVVEEV 710 (881)
T ss_pred HHHHHHHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhcccee-ecCCcchhhhcceeehhhhhHHHHHHHHHHH
Confidence 999999999985 58999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred hhhhCCCCCC-CCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCcccccee
Q 014211 335 KEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (429)
Q Consensus 335 ~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~ 411 (429)
+++++|+|++ +++-||--...++.++-+|.+.+. .|+++.+||+. +.+|.|++|||+.+++..|-+..||-||||+.
T Consensus 711 ~~~~ig~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~ 790 (881)
T KOG2452|consen 711 RKMKVGNPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMI 790 (881)
T ss_pred HhhccCCcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEE
Confidence 9999999975 899999999999999999999885 47799999987 55799999999999999999999999999999
Q ss_pred eEecC--CHHHHHHHHHhh
Q 014211 412 IVTVS--IVSSAHFKLKAC 428 (429)
Q Consensus 412 v~~~~--~~~eai~l~n~~ 428 (429)
|..|+ |+++++..+|+|
T Consensus 791 is~f~d~d~~~vl~ran~t 809 (881)
T KOG2452|consen 791 ISRFADGDLDAVLSRANAT 809 (881)
T ss_pred EEecCCCCHHHHHhhcccc
Confidence 99997 588999988876
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-58 Score=491.84 Aligned_cols=340 Identities=16% Similarity=0.158 Sum_probs=291.7
Q ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHH
Q 014211 63 RFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142 (429)
Q Consensus 63 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~ 142 (429)
.++.+|++++|++|++||+.|+++|+.+|.++|+++++.|++++++|++++++|+|||+.+++..++..+++.+++++.
T Consensus 8 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~~~- 86 (862)
T PRK13805 8 VTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNSYK- 86 (862)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHhc-
Confidence 7899999999999999999999999999999999999999999999999999999999988863344444444433322
Q ss_pred HHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhh-
Q 014211 143 LKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED- 221 (429)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~- 221 (429)
.++..+ ..........+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.+
T Consensus 87 ~~~~~g-----~~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~ 161 (862)
T PRK13805 87 DEKTVG-----VIEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA 161 (862)
T ss_pred CCCccc-----ccCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence 111111 01111234567899999999999999999999999999999999999999999999999999998764
Q ss_pred ---h-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHH
Q 014211 222 ---Y-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTR 295 (429)
Q Consensus 222 ---a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~ 295 (429)
+ +|+|+||+++| +.+.+..|++|+ +|.|.||||+..+ +.++.+++|+++|+|||||+||++|||++.|++
T Consensus 162 l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~pv~~e~gGk~p~iV~~dADl~~Aa~ 237 (862)
T PRK13805 162 AVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGKPALGVGAGNVPAYIDKTADIKRAVN 237 (862)
T ss_pred HHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCCCeEEECCCCCeEEEeCCCCHHHHHH
Confidence 5 99999999998 678899999997 9999999999864 455678899999999999999999999999999
Q ss_pred HHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCC--EE
Q 014211 296 RIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD--KI 373 (429)
Q Consensus 296 ~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~--~v 373 (429)
.+++++| +|+||.|+++++||||++++++|+++|+++ .+|++++.+++++.++++++..++ ..
T Consensus 238 ~i~~~k~-~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~--------------g~~l~~~~~~~~v~~~i~~a~~~~~~~~ 302 (862)
T PRK13805 238 DILLSKT-FDNGMICASEQAVIVDDEIYDEVKEEFASH--------------GAYFLNKKELKKLEKFIFGKENGALNAD 302 (862)
T ss_pred HHHHhhh-ccCCCccCCCceEEEehhhHHHHHHHHHHh--------------CCeeCCHHHHHHHHHHHhhccCCCcCcc
Confidence 9999999 999999999999999999999999999886 158999999999999999875433 12
Q ss_pred EeCCccC----CCCceEecEE------EecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 374 VYGGQRD----EKQLKIAPTI------LLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 374 l~gg~~~----~~g~~~~Ptv------l~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+.||... ..|+|++||+ +.+++++|++++ |+||||++|++|+|.+|||+++|++
T Consensus 303 ~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~ 366 (862)
T PRK13805 303 IVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKL 366 (862)
T ss_pred ccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHH
Confidence 4566421 2488999997 678889999887 7999999999999999999999984
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-57 Score=452.26 Aligned_cols=314 Identities=19% Similarity=0.217 Sum_probs=264.8
Q ss_pred HHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCc----hhhhH-------hhHHHHHHH
Q 014211 67 EKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFI-------SEISMTKSS 135 (429)
Q Consensus 67 ~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~-------~ev~~a~~~ 135 (429)
.|+++++++|++||+.|+.+|..+|.++|++++++|++++++|+++++.|+||+. .++.. .|+..+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999998887764 34321 478888888
Q ss_pred HHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHH
Q 014211 136 CKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLL 215 (429)
Q Consensus 136 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l 215 (429)
+++++.+.+.. +.. ........+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++.++
T Consensus 84 ~~~~a~~~~~~-g~~-~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l 159 (417)
T PRK00197 84 LRQVAALPDPV-GEV-LDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRAL 159 (417)
T ss_pred HHHHhhcCCCc-ccc-ccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHH
Confidence 88888765432 211 11100011335688999999999999986 4 67888999999999999999999999999999
Q ss_pred HHHH----hhh-cCCCceEEecC-CHH-HHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCC
Q 014211 216 AKLL----EDY-VDNSAVRVVEG-AVA-ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDST 287 (429)
Q Consensus 216 ~~~l----~~a-lP~~~v~~v~~-~~~-~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~d 287 (429)
++++ .++ +|+|++|+++| +.+ .+..|..|+ +|.|.||||+.+|+.+.+.+ ++|+++|+|||||+||++|
T Consensus 160 ~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~~d 236 (417)
T PRK00197 160 VAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVDES 236 (417)
T ss_pred HHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCC
Confidence 8886 566 99999999996 544 566677786 99999999999999998864 5899999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhh
Q 014211 288 INLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDED 367 (429)
Q Consensus 288 adl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a 367 (429)
||++.|++.+++++| .|+| .|++++|+|||+++|++|+++|++++++++.+
T Consensus 237 Adl~~Aa~~iv~~~~-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~--------------------------- 287 (417)
T PRK00197 237 ADLDKALKIVLNAKT-QRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVE--------------------------- 287 (417)
T ss_pred CCHHHHHHHHHHhcc-CCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCe---------------------------
Confidence 999999999999999 9999 99999999999999999999999999887532
Q ss_pred hcCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 368 KVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 368 ~~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++ ||.. ..+ |+ |||+ +++|.+++||+||||++|++|+|.+|||+++|++
T Consensus 288 -----~~-~~~~-~~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~ 336 (417)
T PRK00197 288 -----LR-GDEA-ALA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRY 336 (417)
T ss_pred -----Ee-cCHH-HHH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhc
Confidence 11 1110 012 33 9998 4679999999999999999999999999999975
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-57 Score=449.19 Aligned_cols=310 Identities=20% Similarity=0.270 Sum_probs=260.7
Q ss_pred HHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCch----hhhH-------hhHHHHHHHHHHH
Q 014211 71 SLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPF----ETFI-------SEISMTKSSCKLA 139 (429)
Q Consensus 71 ~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~~-------~ev~~a~~~l~~~ 139 (429)
..+++|++||+.|+.+|..+|.++|+++++.|++++++|+++++.|+||+.. ++.. .|+..+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999777666533 3321 4788888888888
Q ss_pred HHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHH
Q 014211 140 LKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL 219 (429)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l 219 (429)
+...+. .+.. ........+...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|.++..+++++
T Consensus 82 a~~~~~-~g~~-~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~ 157 (406)
T cd07079 82 AALPDP-VGEV-LRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEII 157 (406)
T ss_pred HhcCCC-Cccc-ccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHH
Confidence 765432 1111 1110001123467899999999999996 56 678899999999999999999999999999999998
Q ss_pred h----hh-cCCCceEEecC-CH-HHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHH
Q 014211 220 E----DY-VDNSAVRVVEG-AV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQ 291 (429)
Q Consensus 220 ~----~a-lP~~~v~~v~~-~~-~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~ 291 (429)
. ++ +|+|++|+++| +. ..+..|..|+ +|.|.||||+.+|+.|.+.+ ++|+++|+|||||+||++|||++
T Consensus 158 ~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl~ 234 (406)
T cd07079 158 QEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADLE 234 (406)
T ss_pred HHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCHH
Confidence 7 66 99999999998 45 4567777887 99999999999999998876 69999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCC
Q 014211 292 VTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD 371 (429)
Q Consensus 292 ~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~ 371 (429)
.|++.+++++| .|+| .|++++|||||+++|++|+++|++++++. ++
T Consensus 235 ~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~--------------------------------ga 280 (406)
T cd07079 235 MAVRIVVNAKT-QRPS-VCNALETLLVHRDIAEEFLPKLAEALREA--------------------------------GV 280 (406)
T ss_pred HHHHHHHHccc-CCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHC--------------------------------CC
Confidence 99999999999 9999 99999999999999999999999987752 23
Q ss_pred EEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 372 KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 372 ~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++ ||... ..|++|| ++++|.+++||+||||++|++|+|++|||+++|++
T Consensus 281 ~~~-~g~~~--~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~ 330 (406)
T cd07079 281 ELR-GDEET--LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRY 330 (406)
T ss_pred EEe-cCHHH--HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHh
Confidence 433 33221 1377888 68899999999999999999999999999999975
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-57 Score=408.99 Aligned_cols=395 Identities=19% Similarity=0.272 Sum_probs=356.0
Q ss_pred ccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHH
Q 014211 15 GAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQ 94 (429)
Q Consensus 15 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~ 94 (429)
+++.++.---+| +|..+ | .-+...+|+++++++ .+.+++.+|.+.+++.|++|++-|...|...|.++
T Consensus 15 glte~n~gvy~g-kw~a~--g--------~vv~t~~pann~pia-~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgei 82 (507)
T KOG2453|consen 15 GLTENNAGVYHG-KWAAS--G--------QVVQTFAPANNSPIA-NVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEI 82 (507)
T ss_pred CCcccccceeee-eeccC--C--------ceeEeecCCCCChhH-HHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchH
Confidence 555566555677 89775 3 347778889999999 55599999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEE
Q 014211 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVL 174 (429)
Q Consensus 95 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 174 (429)
.+++.|.|+...+.|-+++++|+||-+.+. ++|+...++.|+|+.+..+.+-++... ..++++--.-.+.|+|+|+
T Consensus 83 vrqigdalr~klq~lg~lvslemgkilaeg-vgevqeyvdicdyavglsr~l~g~i~p---serpghalleqwnplg~vg 158 (507)
T KOG2453|consen 83 VRQIGDALRTKLQNLGKLVSLEMGKILAEG-VGEVQEYVDICDYAVGLSRSLEGKIFP---SERPGHALLEQWNPLGVVG 158 (507)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHhhhc-chhHHHHHHHHHHhhhhhhhhCCcccC---CCCCchhHHHhcCCcceEE
Confidence 999999999999999999999999999999 589999999999999988776554432 2234444556789999999
Q ss_pred EEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhh----h-cCCCceEEecCCHHHHHHHHhcC-CCE
Q 014211 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED----Y-VDNSAVRVVEGAVAETSALLEQK-WDK 248 (429)
Q Consensus 175 ~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~----a-lP~~~v~~v~~~~~~~~~L~~~~-v~~ 248 (429)
+|+.+|||....-|.-+.|+.+||+|+|||++.+|+++..+-+++.+ - +|.+.....+|..+.+.++.+.. +..
T Consensus 159 vitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnl 238 (507)
T KOG2453|consen 159 VITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNL 238 (507)
T ss_pred EEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceee
Confidence 99999999999999999999999999999999999987766555554 4 79999999999999999999885 999
Q ss_pred EEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHH
Q 014211 249 ILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLID 328 (429)
Q Consensus 249 v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~ 328 (429)
+.||||+..++.+.+....+..+..+|+||+|+.||.+|||+..++...++++. ..+||+|+..+|+|+|+++||+.++
T Consensus 239 vsftGssQvgKsvgq~vqarfgk~llelggnnaiiv~edadl~lvvps~lfaav-gtagqrctt~rrl~~hesvyd~vle 317 (507)
T KOG2453|consen 239 VSFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAV-GTAGQRCTTTRRLIVHESVYDQVLE 317 (507)
T ss_pred cccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEeccccceeeehHHHHHHh-cccccchhhhhHHHhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHhhhhCCCCCC-CCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCc
Q 014211 329 SLRNELKEFFGKNPME-SKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEI 405 (429)
Q Consensus 329 ~l~~~~~~~~~g~~~~-~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~ 405 (429)
+|++..+++++|+|++ ++.+||+.+++...+..+-+++++ .|+++++||+. +.+|+|++|||++ ..+|.++..+|.
T Consensus 318 rlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~et 396 (507)
T KOG2453|consen 318 RLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRET 396 (507)
T ss_pred HHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhh
Confidence 9999999999999975 789999999999999999999986 58899999997 5679999999997 789999999999
Q ss_pred cccceeeEecCCHHHHHHHHHh
Q 014211 406 FGPLLPIVTVSIVSSAHFKLKA 427 (429)
Q Consensus 406 fgPv~~v~~~~~~~eai~l~n~ 427 (429)
|+||++|++|++++||+..-|.
T Consensus 397 fapilyvlkf~~~eea~ainne 418 (507)
T KOG2453|consen 397 FAPILYVLKFSTLEEAIAINNE 418 (507)
T ss_pred ccceeeEEeccchhhhheeccc
Confidence 9999999999999999986553
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-55 Score=460.73 Aligned_cols=311 Identities=21% Similarity=0.227 Sum_probs=268.4
Q ss_pred HHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHhcC--CCchhhh---HhhHHHHHHH
Q 014211 67 EKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAI------HKDLS--KPPFETF---ISEISMTKSS 135 (429)
Q Consensus 67 ~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~------~~e~G--k~~~~a~---~~ev~~a~~~ 135 (429)
.++++++++|++||+.|+.+|+.+|.++|+++++.|+++.++|++++ ++|+| ||+.++. ..|+..+++.
T Consensus 294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~ 373 (718)
T PLN02418 294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS 373 (718)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence 35999999999999999999999999999999999999999999996 77999 8877763 3599999999
Q ss_pred HHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHH
Q 014211 136 CKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLL 215 (429)
Q Consensus 136 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l 215 (429)
++|+++. .+..+...... ....+...++.++|+|||++|+||| |+... +++++||++||+||+|||+.+|+++..+
T Consensus 374 ~~~~a~~-~~~~g~~~~~~-~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l 449 (718)
T PLN02418 374 IRQLADM-EDPIGRVLKRT-EVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAIL 449 (718)
T ss_pred HHHHhcC-ccccCcccccc-ccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHH
Confidence 9999987 43333221100 0112333678999999999999999 99998 9999999999999999999999999999
Q ss_pred HHHHhhhcCCCc----eEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCH
Q 014211 216 AKLLEDYVDNSA----VRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINL 290 (429)
Q Consensus 216 ~~~l~~alP~~~----v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl 290 (429)
++++.+++|+|+ +|+++|+.+.+..|..|+ ++.|.||||+.. +.+.++.+++|+++|+|||||+||++|||+
T Consensus 450 ~~l~~eAlP~gv~~~v~nvv~g~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~~~k~v~lELGGk~p~iV~~DADl 526 (718)
T PLN02418 450 HKVITDAIPKTVGGKLIGLVTSRDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKASTKIPVLGHADGICHVYVDKSADM 526 (718)
T ss_pred HHHHHHHccccCCcceEEEeCCcHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHhcCCCEEEeCCCcceEEEeCCCCH
Confidence 999999999996 999998667788899997 999999999964 555566678999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhc-
Q 014211 291 QVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV- 369 (429)
Q Consensus 291 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~- 369 (429)
+.|++.+++++| .| ||.|++.+|+|||+++|++ | .+.++|+++..
T Consensus 527 d~A~~~i~~~~~-~n-GQ~C~a~~RllVh~~i~d~-----------------------G---------~~~~~i~~a~~~ 572 (718)
T PLN02418 527 DMAKRIVVDAKT-DY-PAACNAMETLLVHKDLVQN-----------------------G---------GLNDLLVALRSA 572 (718)
T ss_pred HHHHHHHHHHhC-CC-CCccccCcEEEEecccccc-----------------------c---------cHHHHHHHHHHC
Confidence 999999999999 88 9999999999999999986 1 24788888864
Q ss_pred CCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 370 ~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
|+++ +||.... | ++. + ++|.+++||+|||+++|.+|+|++|||+++|++
T Consensus 573 Ga~l-~Gg~~~~-g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s 621 (718)
T PLN02418 573 GVTL-YGGPRAS-K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRH 621 (718)
T ss_pred CCEE-ECCcccc-C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcC
Confidence 6777 6875422 4 233 3 789999999999999999999999999999986
|
|
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-55 Score=430.86 Aligned_cols=308 Identities=19% Similarity=0.174 Sum_probs=258.5
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHH------HHHhcCCCc------hhhhHhhHHHHHHHHHHHHHHH
Q 014211 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEA------IHKDLSKPP------FETFISEISMTKSSCKLALKEL 143 (429)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~------~~~e~Gk~~------~~a~~~ev~~a~~~l~~~~~~~ 143 (429)
|++||+.|+++|+.+|.++|+++++.|++++++|+++ +++|+|||. .++. .|+..+++.++++++..
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~-~ev~~~~~~~~~~a~~a 79 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTE-GRLKGIADGVKDVIELA 79 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCH-HHHHHHHHHHHHHhcCC
Confidence 5789999999999999999999999999999999999 999999994 3454 69999999999999877
Q ss_pred HhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHH----
Q 014211 144 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLL---- 219 (429)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l---- 219 (429)
+.+ +. ..+......+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+++++
T Consensus 80 ~~~-g~-~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al 155 (398)
T TIGR00407 80 DPV-GK-VIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDAL 155 (398)
T ss_pred CCC-cc-cccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHH
Confidence 653 32 111101113446788999999999999997 6 668889999999999999999999999999999994
Q ss_pred hhh-cCCCceEEecC-CHH-HHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHH
Q 014211 220 EDY-VDNSAVRVVEG-AVA-ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTR 295 (429)
Q Consensus 220 ~~a-lP~~~v~~v~~-~~~-~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~ 295 (429)
.++ +|+|+||+++| +.+ .+..|..|+ ++.|.||||+.+++.+.+. ..+|+++|+|||||+||++|||++.|++
T Consensus 156 ~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~---~~~~~~~e~gGk~p~iV~~dADl~~Aa~ 232 (398)
T TIGR00407 156 AQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT---STIPVLGHGDGICHIYLDESADLIKAIK 232 (398)
T ss_pred HHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh---CCCCEEEecCCcceEEEeCCCCHHHHHH
Confidence 477 99999999997 544 677788886 9999999999999988764 3479999999999999999999999999
Q ss_pred HHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEe
Q 014211 296 RIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVY 375 (429)
Q Consensus 296 ~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~ 375 (429)
.+++++| .+ ||.|++++|+|||+++|++|+++|++.+.++.. .+++ .+.+.+++..
T Consensus 233 ~iv~~~~-~~-GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~-------~~~~------~~~i~~~v~~--------- 288 (398)
T TIGR00407 233 VIVNAKT-QR-PSTCNAIETLLVNKAIAREFLPVLENQLLEKGV-------TIHA------DAYALKLLEL--------- 288 (398)
T ss_pred HHHhhhc-CC-CCcccccceEEEeHHHHHHHHHHHHHHHHhcCC-------EEec------CHHHHHHHhc---------
Confidence 9999999 75 999999999999999999999999999987643 1222 1344444431
Q ss_pred CCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 376 GGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 376 gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
|| ||++ + .++.+++||+||||++|++|+|++|||+++|++
T Consensus 289 g~----------~tv~-~--~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~ 328 (398)
T TIGR00407 289 GP----------ATEA-I--VCKTDFDKEFLSLDLSVKIVESLEAAIQHINQY 328 (398)
T ss_pred cC----------cccc-c--cccccccchhhCceeEEEEECCHHHHHHHHHHh
Confidence 11 3554 2 337899999999999999999999999999974
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-53 Score=423.33 Aligned_cols=302 Identities=19% Similarity=0.153 Sum_probs=262.0
Q ss_pred HHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhh----------HhhHHHHHHHHHHHHHHH
Q 014211 74 KELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF----------ISEISMTKSSCKLALKEL 143 (429)
Q Consensus 74 ~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~----------~~ev~~a~~~l~~~~~~~ 143 (429)
++|++||+.|+++|..+|.++|+++++.|++++++|+++++.|+||++.+.. ..|+..+++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3689999999999999999999999999999999999999999999865432 137888888888888654
Q ss_pred HhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-
Q 014211 144 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY- 222 (429)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a- 222 (429)
.+..+... ......++.++|+||+++|.|||||+. .++++++||++||+||+|||+.+|+++.++++++.++
T Consensus 81 ~~~~~~~~------~~~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~ 153 (397)
T cd07077 81 GHIQDVLL------PDNGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAAD 153 (397)
T ss_pred CcccceEe------cCCCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHh
Confidence 43322111 112356899999999999999999999 9999999999999999999999999999999998874
Q ss_pred ---cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHH
Q 014211 223 ---VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRI 297 (429)
Q Consensus 223 ---lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i 297 (429)
+|+++|+++++ +.+.+..|+.|+ +|.|.||||+.+++.+.+.+. ++|++.|+||+|++||++|+|++.|++.+
T Consensus 154 ~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~ 231 (397)
T cd07077 154 AAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSV 231 (397)
T ss_pred hcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHH
Confidence 89999999987 667889999997 999999999999999988774 68999999999999999999999999999
Q ss_pred HHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCC
Q 014211 298 IAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGG 377 (429)
Q Consensus 298 ~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg 377 (429)
++++| ++ ||.|+++++||||+++|++|+++|++++.. .|++++.||
T Consensus 232 ~~~~~-~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~--------------------------------~G~~~~~g~ 277 (397)
T cd07077 232 HDSKF-FD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV--------------------------------EGLKVPQET 277 (397)
T ss_pred HHhhc-cC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh--------------------------------cCcCcCCCc
Confidence 99999 99 999999999999999999999999998764 244555554
Q ss_pred ccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHH----HHHHHHHhh
Q 014211 378 QRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVS----SAHFKLKAC 428 (429)
Q Consensus 378 ~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~----eai~l~n~~ 428 (429)
. +.|+.|| ++|.+.+||+||||++|++|+|.+ +|++++|++
T Consensus 278 ~----~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~ 322 (397)
T cd07077 278 K----PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESG 322 (397)
T ss_pred e----eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhc
Confidence 2 4677776 788999999999999999999997 555566754
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-52 Score=412.16 Aligned_cols=293 Identities=34% Similarity=0.516 Sum_probs=272.9
Q ss_pred HHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCccc
Q 014211 74 KELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAK 153 (429)
Q Consensus 74 ~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~ 153 (429)
++|++|++.|+.++..+|.++|+++++.|.++.++|++++++|+||++.++. .|+..+++.+++++...+++.+...
T Consensus 1 ~~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~-~ev~~~~~~l~~~~~~~~~~~~~~~-- 77 (367)
T cd06534 1 AAARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVARAIDTFRYAAGLADKLGGPEL-- 77 (367)
T ss_pred ChHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcc--
Confidence 3689999999999999999999999999999999999999999999999986 6999999999999999887765221
Q ss_pred ccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEec
Q 014211 154 TSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVE 232 (429)
Q Consensus 154 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~ 232 (429)
.....+...+++++|+||+++|.|||+|+...++.+++||++||+||+|||+.+|.++..+.+++.++ +|++++++++
T Consensus 78 -~~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~ 156 (367)
T cd06534 78 -PSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVP 156 (367)
T ss_pred -cccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEE
Confidence 11234566789999999999999999999999999999999999999999999999999999999999 8999999999
Q ss_pred CCH-HHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcc
Q 014211 233 GAV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQAC 310 (429)
Q Consensus 233 ~~~-~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C 310 (429)
|+. +.++.|+.|+ +|.|.||||+++++.+.+.++++++|+++|+||+|++||++|+|++.+++.++++++ +++||.|
T Consensus 157 ~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~-~~~gq~C 235 (367)
T cd06534 157 GGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAF-FNAGQIC 235 (367)
T ss_pred cCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCC
Confidence 954 4788999997 899999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred ccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCCCCceEecEE
Q 014211 311 IGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTI 390 (429)
Q Consensus 311 ~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~~g~~~~Ptv 390 (429)
+++++||||++++++|+++|+ ||
T Consensus 236 ~s~~~v~v~~~~~~~f~~~l~---------------------------------------------------------tl 258 (367)
T cd06534 236 TAASRLLVHESIYDEFVEKLV---------------------------------------------------------TV 258 (367)
T ss_pred CCCcEEEEcHHHHHHHHHhhc---------------------------------------------------------ee
Confidence 999999999999999999997 67
Q ss_pred EecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 391 LLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 391 l~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+.+++++++++++|+|||+++|++|++.+|+++++|++
T Consensus 259 ~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~ 296 (367)
T cd06534 259 LVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDT 296 (367)
T ss_pred eeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCC
Confidence 77788899999999999999999999999999999875
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-51 Score=431.16 Aligned_cols=308 Identities=19% Similarity=0.194 Sum_probs=247.5
Q ss_pred HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhH--------h-------hHHHH
Q 014211 68 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFI--------S-------EISMT 132 (429)
Q Consensus 68 dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~--------~-------ev~~a 132 (429)
+++..+++|++||+.|+.++.++|.++|++++++|+++.++|+ .++||++.+++. . |+..+
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 4889999999999999999999999999999999999999997 478888876542 1 24445
Q ss_pred HHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHH
Q 014211 133 KSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212 (429)
Q Consensus 133 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~ 212 (429)
++.+++++. ..+..+.. .+......+...+..++|+|||++|+||| |+.. ++++++||++||+||+|||+.+|.++
T Consensus 363 ~~~l~~~a~-~~~~~g~~-~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~ 438 (715)
T TIGR01092 363 AISLRQLAA-MEDPIGRV-LKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSN 438 (715)
T ss_pred HHHHHHHhc-CCCccccc-ccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHH
Confidence 555555544 21111111 10000111223567899999999999999 9998 68999999999999999999999999
Q ss_pred HHHHHHHhhhcCCC----ceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCC
Q 014211 213 SLLAKLLEDYVDNS----AVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDST 287 (429)
Q Consensus 213 ~~l~~~l~~alP~~----~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~d 287 (429)
.++++++.++||++ +++++++..+.+..|..|+ +|.|.||||+.+|+.|.+.++ +|+++|+|||||+||++|
T Consensus 439 ~~l~~l~~~alp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~iV~~d 515 (715)
T TIGR01092 439 AILHKVITEAIPIHVGKKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVYVDKS 515 (715)
T ss_pred HHHHHHHHHHcCCCCCCcEEEEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEEECCC
Confidence 99999999999987 6899986455667777776 999999999999999998864 999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhh
Q 014211 288 INLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDED 367 (429)
Q Consensus 288 adl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a 367 (429)
||++.|++.+..++| ++||.|++++|||||++++++ | .+.++++++
T Consensus 516 ADl~~A~~~i~~~~~--~~GQ~C~a~~rvlV~~~i~d~------------------------~--------~~~~~v~~~ 561 (715)
T TIGR01092 516 ASVDMAKRIVRDAKC--DYPAACNAMETLLVHKDLLRN------------------------G--------LLDDLIDML 561 (715)
T ss_pred CCHHHHHHHHHHHhC--CCCCccccCcEEEEehhhccc------------------------h--------hHHHHHHHH
Confidence 999999877777766 559999999999999999874 0 145556655
Q ss_pred h-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 368 K-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 368 ~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
. .|+++ +||.... .|+. ..+++|.+++||+||||++|++|+|++|||+++|++
T Consensus 562 ~~~Ga~l-~Gg~~~~--~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~ 615 (715)
T TIGR01092 562 RTEGVTI-HGGPRFA--AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKH 615 (715)
T ss_pred HHCCCEE-ECCcchh--heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcC
Confidence 4 45666 5775422 2432 235689999999999999999999999999999975
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=279.84 Aligned_cols=247 Identities=18% Similarity=0.211 Sum_probs=190.7
Q ss_pred CCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCC----CceEEe--cC
Q 014211 160 PSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDN----SAVRVV--EG 233 (429)
Q Consensus 160 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~----~~v~~v--~~ 233 (429)
+...++.++|+|++++|.|||+|+ ..++.+++||++||++|+|||+.+|.++.++.++|.+++|+ +.++++ +|
T Consensus 103 ~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~~p~~~~~~~~~vv~~~g 181 (422)
T cd07080 103 GRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADVDPNHPLTDSISVVYWPG 181 (422)
T ss_pred CCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhcCCCCcccceEEEEEecC
Confidence 456688999999999999999999 79999999999999999999999999999999999999888 788888 45
Q ss_pred -CHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCC-CcEEEcCCC----CHHHHHHHHHHHHHHhcCC
Q 014211 234 -AVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGK-SPAVVDSTI----NLQVTTRRIIAGKWMANNG 307 (429)
Q Consensus 234 -~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~-~~~iV~~da----dl~~aa~~i~~~~~~~~~G 307 (429)
+.+.++.|++++ |.|+||||+++++.|.+.++.+ +.++|+||| +++|+++++ |++.+++.++++++ .++|
T Consensus 182 ~~~~~~~~l~~~~-D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~-~~~g 257 (422)
T cd07080 182 GDAELEERILASA-DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDIC-RYDQ 257 (422)
T ss_pred CchHHHHHHHHhC-CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHH-HHhh
Confidence 445788899888 9999999999999999988865 569999999 556666668 99999999999999 9999
Q ss_pred CccccccEEEEeCCc---hHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCC
Q 014211 308 QACIGVDYIITTKDF---APKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQ 383 (429)
Q Consensus 308 q~C~~~~~v~V~~~~---~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g 383 (429)
|.|+|+++||||+++ +++|.++|.++++++....|. +++ +.....++...-..+. .+......+ +.
T Consensus 258 Q~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~~~~p~-----~~~-~~~~~~~~~~~r~~~~~~~~~~~~~~---~~- 327 (422)
T cd07080 258 QACSSPQVVFVEKDDDEELREFAEALAAALERLPRRYPA-----LSL-SAAESAKIARARLEAEFYELKGGVSR---DL- 327 (422)
T ss_pred hhccCCeEEEEECCCCchHHHHHHHHHHHHHHHHHhCCC-----CCC-CHHHHHHHHHHHHHHHHHHHhcCCCC---CC-
Confidence 999999999999999 999999999999988643331 111 2222222222211111 111110011 11
Q ss_pred ceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHh
Q 014211 384 LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKA 427 (429)
Q Consensus 384 ~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~ 427 (429)
..+|+...+.. +. ....+-.+.|+++++++|++..++.
T Consensus 328 ---~~~v~~~~~~~--~~-~~~~~r~v~v~~v~~l~~~l~~~~~ 365 (422)
T cd07080 328 ---GWTVIISDEIG--LE-ASPLNRTVNVKPVASLDDVLRPVTP 365 (422)
T ss_pred ---CeEEEEeCCCC--cc-CCCCcCEEEEEEcchHHHHHHhhhh
Confidence 22555433222 11 2566678899999999999998874
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=204.06 Aligned_cols=316 Identities=20% Similarity=0.232 Sum_probs=244.7
Q ss_pred HHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcC----CCchhhhHhhHHHHHHHHHHHHHH
Q 014211 67 EKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLS----KPPFETFISEISMTKSSCKLALKE 142 (429)
Q Consensus 67 ~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~G----k~~~~a~~~ev~~a~~~l~~~~~~ 142 (429)
.++....+.|++|......++..+|.+.|.++++.|+++.+++.+...+|.- ..+.++.+..+.+.-..++..+..
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 4667788899999999999999999999999999999999998887766632 234444444555666677777666
Q ss_pred HHhhcCCC-----cccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHH
Q 014211 143 LKYWTKPE-----KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAK 217 (429)
Q Consensus 143 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~ 217 (429)
++....-. .........+-..+..+.|+||+++|.- .-........+-+|.+||+||+|.++.+..+...+.+
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvIYE--sRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~ 160 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVIYE--SRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVE 160 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEEEe--cCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHH
Confidence 66533211 1111222334556788999999999954 3345566778889999999999999999999999988
Q ss_pred HHhhh-----cCCCceEEecC-CHHHHHHHHhcC--CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCC
Q 014211 218 LLEDY-----VDNSAVRVVEG-AVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTIN 289 (429)
Q Consensus 218 ~l~~a-----lP~~~v~~v~~-~~~~~~~L~~~~--v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dad 289 (429)
+++++ +|.+.||+++. +++....|++.+ +|.|.-.||.+--+.+.+.+. .||+-..-|++.++|+.+||
T Consensus 161 ~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyvd~~AD 237 (417)
T COG0014 161 VIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYVDESAD 237 (417)
T ss_pred HHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEecccCC
Confidence 87764 79999999987 778888888874 999999999998888777665 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhc
Q 014211 290 LQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369 (429)
Q Consensus 290 l~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 369 (429)
++.|.+-++.+++ .+-+ .|.+...++||+.+.++|+..|.+.+....+. .-| + ++..+.+.+.
T Consensus 238 ld~A~~ii~nAKt-qrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gve------lr~---d----~~~~~~~~~~-- 300 (417)
T COG0014 238 LDKALKIIVNAKT-QRPS-VCNAAETLLVHRAIAKSFLPKLANALQEAGVE------LRG---D----AEALALLPDA-- 300 (417)
T ss_pred HHHHHHHHHcccC-CCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhcCeE------EEc---C----HHHHHhcccc--
Confidence 9999999999998 5544 89999999999999999999999988743221 000 0 1112222100
Q ss_pred CCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHh
Q 014211 370 SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKA 427 (429)
Q Consensus 370 ~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~ 427 (429)
+ .+.....|..|...+++.|..+++.+|||+.||.
T Consensus 301 -------------~----------~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~ 335 (417)
T COG0014 301 -------------V----------KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINT 335 (417)
T ss_pred -------------C----------CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHH
Confidence 0 2334456789999999999999999999999985
|
|
| >KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.3e-18 Score=154.15 Aligned_cols=308 Identities=22% Similarity=0.256 Sum_probs=219.1
Q ss_pred HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHhcCCCchhhhHhhHHHHHHHHHHHHHH
Q 014211 69 AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAI------HKDLSKPPFETFISEISMTKSSCKLALKE 142 (429)
Q Consensus 69 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~------~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~ 142 (429)
++...+.||++++..+.++.++|.++|.+++++|+.+..++.+.. +++.| +.+..+..+...-..+...+..
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~G--L~~sll~RL~l~~~K~~sl~~g 79 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAG--LAESLLKRLDLSPGKISSLAAG 79 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcC--ccHHHHHHhcCChHHHHHHHHH
Confidence 345678899999999999999999999999999987766655432 34555 3333333444444455555444
Q ss_pred HHhhcCCCcc--cc---cccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHH
Q 014211 143 LKYWTKPEKA--KT---SLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAK 217 (429)
Q Consensus 143 ~~~~~~~~~~--~~---~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~ 217 (429)
++.....+.. +. .....+-.-+..-.|+||.++|- ....-.+.....-|++.||.+++|....+..+...|.+
T Consensus 80 ~~~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVIF--ESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~ 157 (433)
T KOG4165|consen 80 LRQIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVIF--ESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHK 157 (433)
T ss_pred HHHHHhcccchhhheeeeeccCCceEEEeeccceEEEEEe--ccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHH
Confidence 4443331110 00 01112223456678999999994 33444555667778999999999999999999999999
Q ss_pred HHhhhc-----CCCceEEecCCHHHHHHHHhc-C-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCH
Q 014211 218 LLEDYV-----DNSAVRVVEGAVAETSALLEQ-K-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINL 290 (429)
Q Consensus 218 ~l~~al-----P~~~v~~v~~~~~~~~~L~~~-~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl 290 (429)
+.++++ |.+.|++|.. ++....|++. + +|.|.-.||+.-.+.|.+... +||..+..|.+.++|+.|+|+
T Consensus 158 ~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~dad~ 233 (433)
T KOG4165|consen 158 LVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDKDADL 233 (433)
T ss_pred HHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEeccccCH
Confidence 988873 6778898875 4455556665 4 999999999999999877654 899999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCccccccEEEEeCCc-hHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhc
Q 014211 291 QVTTRRIIAGKWMANNGQACIGVDYIITTKDF-APKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369 (429)
Q Consensus 291 ~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~-~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 369 (429)
++|.+-+..+++ +..-.|.+...+++|++. ...|.+.+...+..
T Consensus 234 ~kA~riv~DaK~--dYPAaCNAmETLLIh~dl~~~~~~~~l~~~l~~--------------------------------- 278 (433)
T KOG4165|consen 234 DKAKRIVRDAKC--DYPAACNAMETLLIHKDLEQSPFFDDLINMLKE--------------------------------- 278 (433)
T ss_pred HHHHHHHhcccC--CCchhhhhHHHHhccHhhhhcchHHHHHHHHHh---------------------------------
Confidence 999999999987 666799999999999984 44444444443332
Q ss_pred CCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHh
Q 014211 370 SDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKA 427 (429)
Q Consensus 370 ~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~ 427 (429)
++.-+++|..- .-..| .++...-++.|.-.-.++|-.+++.++||+.|+.
T Consensus 279 ~gVtl~agpkl~~~l~~--------~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~ 329 (433)
T KOG4165|consen 279 EGVTLHAGPKLAALLKF--------SPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHT 329 (433)
T ss_pred cCeEEecChhHHhhcCc--------CCchhhhhhhhhcchheeeeecccHHHHHHHHHh
Confidence 22222333221 00111 1344556788988899999999999999999975
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.1e-16 Score=154.46 Aligned_cols=245 Identities=19% Similarity=0.202 Sum_probs=178.0
Q ss_pred ceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCC----CceEEe--cC-CH
Q 014211 163 AEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDN----SAVRVV--EG-AV 235 (429)
Q Consensus 163 ~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~----~~v~~v--~~-~~ 235 (429)
.+..+.|.|++++|.|.|-|.. .++.++.+|++||..|+|+|+..+..+..+.+.|.+..|. ..+.++ ++ +.
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~-~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l~~~i~v~~~~~~d~ 159 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLV-GFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPLADSIAVVYWPGGDE 159 (399)
T ss_pred chhhccCCceEEEEcCCCccch-HHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchhhhcEEEEEecCCch
Confidence 6778999999999999999976 6667888999999999999999999999999999988775 344555 34 44
Q ss_pred HHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccE
Q 014211 236 AETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDY 315 (429)
Q Consensus 236 ~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~ 315 (429)
+..+.+. ...|+++.+||.++.+.+.+ ..+...+.+....-.+..+|+.+++++.+++.+....+ .+.+|.|.|++.
T Consensus 160 ~~~~~~~-~~~D~vv~wGgd~ti~~ir~-~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~-~~dQ~aCsSp~~ 236 (399)
T PF05893_consen 160 ELEEALS-QQADAVVAWGGDETIRAIRQ-PLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIF-LFDQQACSSPQV 236 (399)
T ss_pred HHHHHHH-HHCCEEEEeCCHHHHHHHHH-HcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHH-HhhCcccCCCeE
Confidence 4555555 44799999999999999998 44445677777778888899999999999999999999 999999999999
Q ss_pred EEEeC---CchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHH-----hhhcCC-EEEeCCccCCCCceE
Q 014211 316 IITTK---DFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD-----EDKVSD-KIVYGGQRDEKQLKI 386 (429)
Q Consensus 316 v~V~~---~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~-----~a~~~~-~vl~gg~~~~~g~~~ 386 (429)
+||.. .-.++|.++|.+.+......-|... .+.....++....+ .+..+. ++. ++.. +
T Consensus 237 ifv~~g~~~~~~~f~~~L~~~L~~~~~~~p~~~------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~---~--- 303 (399)
T PF05893_consen 237 IFVETGDGDSVEEFAERLAEALERAAERYPRGE------LSIDEAAAISSLRAEAELRYALDGEYRVW-SSDD---N--- 303 (399)
T ss_pred EEEECCCcccHHHHHHHHHHHHHHHHHhCCCcC------CCHHHHHHHHHHHHHHHHHHHhcCCccee-ecCC---C---
Confidence 99993 3368889998888876632222110 11111112222222 223333 343 2221 1
Q ss_pred ecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHh
Q 014211 387 APTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKA 427 (429)
Q Consensus 387 ~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~ 427 (429)
..||+....+ .....+.+-.+.|+++++.+|++.+++.
T Consensus 304 ~~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~ 341 (399)
T PF05893_consen 304 SWTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRP 341 (399)
T ss_pred CEEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhh
Confidence 2366544221 2233445678899999999999999875
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.51 E-value=9.2e-08 Score=76.98 Aligned_cols=96 Identities=23% Similarity=0.257 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh--cCCEEEeCCccCCCCceEecEEEecCCCCCCc
Q 014211 324 PKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK--VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTI 400 (429)
Q Consensus 324 ~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~--~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~ 400 (429)
....+.+++..+.+++-+.. +++|. .+..+++.++|+.-. .+..+..-|- ..|+|+.||+|. |+|+|.+
T Consensus 9 ksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y--a~~~f~~~tiLs-vtP~ms~ 80 (157)
T KOG2449|consen 9 KSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY--AEGNFVGPTILS-VTPNMSC 80 (157)
T ss_pred hhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc--ccCCcccceEEE-ecCCcce
Confidence 56677888888888876554 46666 456678888887521 1222222222 468999999998 9999999
Q ss_pred cccCccccceeeEecCCHHHHHHHHHh
Q 014211 401 MKEEIFGPLLPIVTVSIVSSAHFKLKA 427 (429)
Q Consensus 401 ~~~E~fgPv~~v~~~~~~~eai~l~n~ 427 (429)
+.||+||||+..+.-++++|+|..+|+
T Consensus 81 ykeeI~gpVlv~l~~~tldd~I~Iin~ 107 (157)
T KOG2449|consen 81 YKEEIFGPVLVRLETETLDDAIFIINN 107 (157)
T ss_pred eHhhhhcceEEEEeecCCCceeEEEec
Confidence 999999999999999999999998875
|
|
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.1e-06 Score=97.65 Aligned_cols=105 Identities=20% Similarity=0.176 Sum_probs=82.1
Q ss_pred CCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEEecCCHHH
Q 014211 158 TYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAE 237 (429)
Q Consensus 158 ~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~v~~~~~~ 237 (429)
..|+.+.....|+|++++++||| ..++.++..||++||+||+||++.++. ....+|..+.+.+ ..
T Consensus 1067 PTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~--------~~~~Lp~~~~~~~----~~ 1131 (1208)
T PRK11905 1067 PTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA--------ALADLPGLVAARI----DW 1131 (1208)
T ss_pred CCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH--------HHHhCcccccccc----cc
Confidence 46889999999999999999999 457889999999999999999988762 2222566555444 23
Q ss_pred HHHHHhcC-CCEEEEeCChHHHHHHHHHHhcc---cCceeeecC
Q 014211 238 TSALLEQK-WDKILYTGSPRVGRIVMAAAAKH---LTPVILELG 277 (429)
Q Consensus 238 ~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~---~~~~~~e~~ 277 (429)
+..+..++ +++|.|+|+.++.+.+.++.+++ +.|++.|..
T Consensus 1132 ~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet~ 1175 (1208)
T PRK11905 1132 TQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAEP 1175 (1208)
T ss_pred ccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecCC
Confidence 34566665 99999999999999999999876 345555554
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.2e-06 Score=74.79 Aligned_cols=130 Identities=12% Similarity=0.113 Sum_probs=93.8
Q ss_pred CCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHH
Q 014211 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFA 358 (429)
Q Consensus 279 ~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~ 358 (429)
...+||+++.|++.|+.-++.+.- .--...+...|+||++++++|+++++.+++.+... +.+...+.
T Consensus 5 P~lMIvfe~GDlnsA~~~L~~sl~---~Pf~~~~VatVlVqEsireefi~rvr~~m~pl~~~----------va~Hpny~ 71 (215)
T PF07368_consen 5 PQLMIVFEDGDLNSAMHYLLESLH---NPFAPGAVATVLVQESIREEFIERVRSRMKPLSPQ----------VANHPNYL 71 (215)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHh---CcccCCcEEEEEEeHHHHHHHHHHHHHhCccCChh----------hccCcHHH
Confidence 456899999999999999999954 55566788999999999999999999998765311 11223345
Q ss_pred HHHhHHHhhhcCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHh
Q 014211 359 RLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKA 427 (429)
Q Consensus 359 ~~~~~i~~a~~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~ 427 (429)
+..++++ .-+.+++.++... .-..-.|.++.+.+.. .+.. -..+|+++..|++..||+++.++
T Consensus 72 rsl~~i~--~l~~~~I~~~~~~-~~~~aSPilV~d~~h~--~fg~-~PTgViTlhtFRt~~Ea~~l~~k 134 (215)
T PF07368_consen 72 RSLKKIK--CLNAKTIVADFEN-VPPPASPILVCDFTHS--YFGD-GPTGVITLHTFRTPKEAIELCAK 134 (215)
T ss_pred HHHHHHH--hcCCeEEEecccC-CCCCCCCEEEcCCCHH--HcCC-CCCeEEEEEccCCHHHHHHHHhc
Confidence 5555566 3466777664331 1123368998876654 2222 45589999999999999999875
|
The function of this family is unknown. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.018 Score=65.05 Aligned_cols=103 Identities=16% Similarity=0.206 Sum_probs=74.4
Q ss_pred CCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEEecCCHHH
Q 014211 158 TYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAE 237 (429)
Q Consensus 158 ~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~v~~~~~~ 237 (429)
+.|+.+.....|+|+++++.+.. ...+.+++.+|++||.+|+..++. ... +...+|..+.+.+.- ..
T Consensus 1176 PTGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~---~~~-----~~~~Lp~~v~~~v~~--~~ 1242 (1318)
T PRK11809 1176 PTGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDAL---HRA-----LVAALPAAVQARIQL--AK 1242 (1318)
T ss_pred CCCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCch---hHH-----HHHhccHHHHhHhhh--cc
Confidence 46899999999999999998743 357889999999999988864432 122 224488887776521 11
Q ss_pred HHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCcee
Q 014211 238 TSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVI 273 (429)
Q Consensus 238 ~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~ 273 (429)
...+...++++|.|.|+....+.+.++.+++-.+++
T Consensus 1243 ~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809 1243 DWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred ccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence 122222359999999999999999999988754433
|
|
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=83.16 E-value=16 Score=37.46 Aligned_cols=106 Identities=19% Similarity=0.191 Sum_probs=72.1
Q ss_pred CCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEEecCCHHH
Q 014211 158 TYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAE 237 (429)
Q Consensus 158 ~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~v~~~~~~ 237 (429)
..++.+.....|.|-++++.+ +....+.+++.+|++||.+++-+.+........ +|.++-..+.-.
T Consensus 632 ptGErN~~~l~pr~rvl~~~~---~~~~~~~ql~a~la~G~~~v~~~~~~~aa~~~~--------l~~~v~~~~~~~--- 697 (769)
T COG4230 632 PTGERNTYTLHPRGRVLCVAG---DEQDLLTQLAAVLAVGNQVVIPEDSGLAALLKD--------LPSAVASRIQVA--- 697 (769)
T ss_pred CcccceeecccCCccEEEeCC---CHHHHHHHHHHHHhcCCeEEecCcchHHHHHHh--------chhhhhhheeec---
Confidence 357888899999999999866 456788899999999999999766543322222 344332111110
Q ss_pred HHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecC
Q 014211 238 TSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELG 277 (429)
Q Consensus 238 ~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~ 277 (429)
.......+++.+.|.|.++-.+.+.+..+.+..|++.-.+
T Consensus 698 ~~~~~~~~~~~vl~~gd~~~~r~~~~~iA~~~Gpiv~~~~ 737 (769)
T COG4230 698 KDWTADIPFDAVLFHGDSDRLRALCEAIAARDGPIVSVQG 737 (769)
T ss_pred cchhhccceeeEEecCCHHHHHHHHHHHhcCCCCeEEeec
Confidence 1111123589999999999989999988877666655544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 429 | ||||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 5e-75 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 8e-71 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 3e-45 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 8e-44 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 9e-27 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-26 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 2e-26 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 1e-25 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 4e-25 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 9e-23 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 1e-22 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 1e-22 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 1e-22 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 3e-22 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 8e-22 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 1e-20 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 4e-20 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 4e-20 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 5e-20 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 5e-20 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 6e-20 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 1e-19 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-19 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-19 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 2e-19 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 2e-19 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 3e-19 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 5e-19 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 6e-19 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 6e-19 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 8e-19 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 8e-19 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 1e-18 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 1e-18 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 1e-18 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 1e-18 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 2e-18 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 2e-18 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 4e-18 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 4e-18 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 4e-18 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 5e-18 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 2e-17 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 2e-17 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 3e-17 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 4e-17 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 7e-17 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 9e-17 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 1e-16 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 1e-16 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 3e-16 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 3e-16 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 6e-16 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 6e-16 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 7e-16 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 1e-15 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 2e-15 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 3e-15 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 5e-15 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 1e-14 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 1e-14 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 1e-14 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 2e-14 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 3e-14 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-13 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 2e-13 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 1e-12 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 8e-12 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 9e-12 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 1e-11 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 7e-11 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 2e-10 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 3e-10 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 4e-10 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 1e-09 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 6e-09 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 1e-08 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 5e-08 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 2e-07 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 2e-05 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 4e-04 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 5e-04 |
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 560 bits (1446), Expect = 0.0
Identities = 153/357 (42%), Positives = 226/357 (63%), Gaps = 5/357 (1%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
+ K + +K R ++S +T+ ++R+ Q++++ +I+E+E+E++ A+ DL K +
Sbjct: 16 HMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNA 75
Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
+ E+ + +++L W E + + T I SEPLGVVLVI TWNYPF
Sbjct: 76 YYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFN 135
Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQ 244
L++ P++GAIAAGNAVVLKPSE++ +SLLA ++ Y+D V+ G V ET+ LL++
Sbjct: 136 LTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYLDKDLYPVINGGVPETTELLKE 195
Query: 245 KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMA 304
++D ILYTGS VG+I+M AAAKHLTPV LELGGKSP VD +L V RRI GK+M
Sbjct: 196 RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFM- 254
Query: 305 NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLL 364
N+GQ C+ DYI+ ++++ L+ LKEF+G++ +S+D RI++ HF R+ L+
Sbjct: 255 NSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLI 314
Query: 365 DEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
+ K+ YGG D IAPTIL DV S +M+EEIFGP+LPIV V + A
Sbjct: 315 E----GQKVAYGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEA 367
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 500 bits (1290), Expect = e-177
Identities = 117/371 (31%), Positives = 188/371 (50%), Gaps = 7/371 (1%)
Query: 51 SATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEII 110
S + ++K M K SL + + +R T +R ++ + + +E +
Sbjct: 12 SGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALY 71
Query: 111 EAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPL 170
A+ +DL KP ++EI AL L W P + PS ++ EP
Sbjct: 72 SALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPY 131
Query: 171 GVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRV 230
GV +I +NYP L+L P+IGAI GN ++KPSE P TS+++ K++ + V V
Sbjct: 132 GVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEAFAPEYVAV 191
Query: 231 VEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINL 290
++G E S LL +D I +TGSP VG++VM AAAKHLTPV+LELGGK P +V +L
Sbjct: 192 IQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVLPDADL 251
Query: 291 QVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSR 350
T +++ GK++ N+GQ I DY+ L++ L +K + +
Sbjct: 252 DQTVNQLMFGKFI-NSGQTXIAPDYLYVHYSVKDALLERLVERVKTELPEIN----STGK 306
Query: 351 IVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLL 410
+V RL SLL+ + +++ G Q D + ++ T++ V + +M EE+FGP+L
Sbjct: 307 LVTERQVQRLVSLLEATQ--GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPIL 364
Query: 411 PIVTVSIVSSA 421
P++ V +A
Sbjct: 365 PVLEFDSVRTA 375
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 2e-50
Identities = 93/343 (27%), Positives = 155/343 (45%), Gaps = 38/343 (11%)
Query: 91 RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
R + + I E ++++I++AI +L P + M + A L + E
Sbjct: 69 RQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE 128
Query: 151 KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPA 210
+ L E +GV +I+ WN+P + + A AAG+ VVLKPSE P
Sbjct: 129 RRGDDLVVK--------EAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPF 180
Query: 211 TSSLLAKLLEDY-----VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMA 263
+ +LA++ + V N +V G A L + K + +TGS G +M
Sbjct: 181 AAVILAEIFDKVGVPKGVFN----LVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIME 236
Query: 264 AAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFA 323
AAK V LELGGKSP +V ++++ + + N GQ C T+
Sbjct: 237 KAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGK-VVNNTGQVCTA-----GTRVLV 290
Query: 324 PKLI-DSLRNELKEFFGK----NPM-ESKDLSRIVNPFHFARLASLLDEDKVSD--KIVY 375
P I D+ ELKE F + NP + + I++ F ++ + + + + ++ Y
Sbjct: 291 PNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYI-NKGIEEGAELFY 349
Query: 376 GGQRDEKQLK----IAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
GG + L+ PTI ++V + TI +EEIFGP++ ++T
Sbjct: 350 GGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVIT 392
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 5e-49
Identities = 79/345 (22%), Positives = 148/345 (42%), Gaps = 39/345 (11%)
Query: 91 RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WT 147
R+ ++ I + E++ ++ + I ++ P ++ + ++
Sbjct: 87 RLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTAT-------GSSHIRNFIKAY 139
Query: 148 KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEI 207
K + +L A + + +GVV +I+ WN+P VI A+ AG +VLKPSEI
Sbjct: 140 KEFSFQEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEI 199
Query: 208 APATSSLLAKLLEDY-----VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRI 260
AP ++ L A++L++ V N ++ G A + L + I +TGS R G+
Sbjct: 200 APLSAMLFAEILDEAALPSGVFN----LINGDGANVGSYLSAHPDLEMISFTGSTRAGKD 255
Query: 261 VMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320
+ A+ L V LELGGK ++ + ++ R + N+GQ+C T+
Sbjct: 256 ISKNASNTLKRVCLELGGKGANIIFADADIDALQRGVRHC--FYNSGQSCNA-----PTR 308
Query: 321 DFAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KI 373
+ I D K+ K ++ + +V+ + ++ L+ +
Sbjct: 309 MLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATL 368
Query: 374 VYGGQRDEKQLK----IAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
V GG ++ + PT+ DV I +EEIFGP+L ++
Sbjct: 369 VTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLP 413
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 2e-48
Identities = 88/342 (25%), Positives = 146/342 (42%), Gaps = 38/342 (11%)
Query: 91 RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WT 147
R + I + M+ E+++ + + + +PP ++ + Y
Sbjct: 72 RAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMG-------SMGAMNYFAGAA 124
Query: 148 KPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEI 207
+ T + + EP+GVV I WN P L+++ + A+ AG +VLKP+
Sbjct: 125 DKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAE 184
Query: 208 APATSSLLAKLLEDY-----VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRI 260
P T++ LA++ + V + VV G ET L D +TGS VGR
Sbjct: 185 TPLTANALAEVFAEVGLPEGVLS----VVPGG-IETGQALTSNPDIDMFTFTGSSAVGRE 239
Query: 261 VMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320
V AA+ L P LELGGKS A++ ++L ++ + N GQ C + T+
Sbjct: 240 VGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFS-GVMNAGQGC-----VNQTR 293
Query: 321 DFAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KI 373
AP+ D + + F P + + +++ R+ + + ++
Sbjct: 294 ILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARL 353
Query: 374 VYGGQRDEKQLK---IAPTILLDVPDDSTIMKEEIFGPLLPI 412
V GG R E I PT+ DV + TI +EEIFGP+L I
Sbjct: 354 VCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAI 395
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 5e-48
Identities = 83/340 (24%), Positives = 144/340 (42%), Gaps = 36/340 (10%)
Query: 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---W-TKPEKAK 153
A +I ++ E + + KP E ++ + A+ L+Y + + K
Sbjct: 105 AAAIIRRRKHEFSAWLVHEAGKPWKEA-DADTAE-------AIDFLEYYARQMIELNRGK 156
Query: 154 TSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS 213
L+ P+GV + IS WN+ + + + I GN VVLKP+ P ++
Sbjct: 157 EILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAA 216
Query: 214 LLAKLLEDYVDNSA------VRVV--EGAVAETSALLE-QKWDKILYTGSPRVGRIVMAA 264
++LED A + V GA L++ K I +TGS VG +
Sbjct: 217 KFVEVLED-----AGLPKGVINYVPGSGAEV-GDYLVDHPKTSLITFTGSKDVGVRLYER 270
Query: 265 AAK------HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIIT 318
AA HL VI+E+GGK VVD +L + I+ +GQ C +
Sbjct: 271 AAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSA-FGFSGQKCSAGSRAVI 329
Query: 319 TKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSDKIVYGG 377
KD ++++ K +P + +++ F ++ S ++ K +++ GG
Sbjct: 330 HKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGG 389
Query: 378 QRDEKQ-LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
+ D I PTI+ D+ ++ IM+EEIFGP++ +
Sbjct: 390 EGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 1e-47
Identities = 85/335 (25%), Positives = 148/335 (44%), Gaps = 38/335 (11%)
Query: 98 IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
IA+ IE++ +E +EA+ + KP E+ + ++ + A
Sbjct: 93 IADAIEKEADEFAALEAL--NCGKPINAVKNDELPA-------IIDCWRFFAGAVRNLHA 143
Query: 153 KTSLTTYPSS-AEIISEPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPSEIA 208
+ P + I +P+G+V I+ WNYP ++ L P AI GN VV KPSE
Sbjct: 144 PAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAP---AIGGGNTVVFKPSEQT 200
Query: 209 PATSSLLAKLLEDYVDNSAVRVVEGAVAET-SALLE-QKWDKILYTGSPRVGRIVMAAAA 266
P T+ LA+L+ D + V V+ G +AL+ K + TG G+ V+AAAA
Sbjct: 201 PLTALKLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAAAA 260
Query: 267 KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKL 326
K + LELGGK+P +V +L+ I N GQ C + +A
Sbjct: 261 KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTF-GYYNAGQDCTA-----ACRIYAEAG 314
Query: 327 I-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQ 378
I + L +L +++ ++ +++ R+AS ++ +I GG+
Sbjct: 315 IYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGR 374
Query: 379 R-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412
++ PT++ + I++ E+FGP++ +
Sbjct: 375 TGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSV 409
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 2e-47
Identities = 87/335 (25%), Positives = 147/335 (43%), Gaps = 38/335 (11%)
Query: 98 IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
+A++IEE + +E+ + KP F EI + ++ +
Sbjct: 91 LADVIEENGQVFAELESR--NCGKPLHSAFNDEIPA-------IVDVFRFFAGAARCLNG 141
Query: 153 KTSLTTYPSS-AEIISEPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPSEIA 208
+ + I +PLGVV I+ WNYP +++ L P A+AAGN VVLKPSEI
Sbjct: 142 LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP---ALAAGNCVVLKPSEIT 198
Query: 209 PATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAA 266
P T+ LA+L +D V ++ G L K + TGS G +++ A
Sbjct: 199 PLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 258
Query: 267 KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKL 326
+ +ELGGK+P +V +++ + N GQ C + +A K
Sbjct: 259 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTF-GYYNAGQDCTA-----ACRIYAQKG 312
Query: 327 I-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQ 378
I D+L +L P + +L + + H R+ ++E K + K++ GG+
Sbjct: 313 IYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGE 372
Query: 379 R-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412
+ APT+L D I+++E+FGP++ +
Sbjct: 373 KRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSV 407
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 3e-47
Identities = 101/346 (29%), Positives = 152/346 (43%), Gaps = 52/346 (15%)
Query: 98 IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
IA + EK+ E+ +E+I D KP + +Y + A
Sbjct: 81 IAAKVTEKKPELAKLESI--DCGKP--------LDEAAWDIDDVAGCFEYYADLAEKLDA 130
Query: 153 KTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPS 205
+ S EP+GVV +I+ WNYP L++ + P A+AAG A +LKPS
Sbjct: 131 RQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAP---ALAAGCAAILKPS 187
Query: 206 EIAPATSSLLAKLLE-----DYVDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVG 258
E+A T L ++ + V N ++ G E A L DK+ +TGS G
Sbjct: 188 ELASLTCLELGEICKEVGLPPGVLN----ILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243
Query: 259 RIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIIT 318
+M AAA+ + PV LELGGKSP VV ++L I G NGQ C T
Sbjct: 244 SKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFG-CFWTNGQICSA-----T 297
Query: 319 TKDFAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD- 371
++ + I N + ++ +P+E L +V+ + ++ + K
Sbjct: 298 SRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGA 357
Query: 372 KIVYGGQRDEKQLK---IAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
I+ GG R E K I PTI+ DV + I +EE+FGP+L + T
Sbjct: 358 TILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKT 403
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 4e-47
Identities = 77/334 (23%), Positives = 147/334 (44%), Gaps = 24/334 (7%)
Query: 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---W-TKPEKAK 153
A ++ ++ E+ + ++ K E ++++ A+ ++Y +
Sbjct: 105 AAALMRRRKRELEATLVYEVGKNWVEA-SADVAE-------AIDFIEYYARAALRYRYPA 156
Query: 154 TSLTTYP-SSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
+ YP E PLG +VI+ WN+P + ++G +A GN V+ KP+E A
Sbjct: 157 VEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVG 216
Query: 213 SLLAKLLEDY-VDNSAVRVVEGAVAET-SALLE-QKWDKILYTGSPRVGRIVMAAAAK-- 267
+ + ++ + V + G E + L+E + I +TGS VG + AA +
Sbjct: 217 AKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLA 276
Query: 268 ----HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFA 323
+E GGK+ +VD T + + ++ GQ C +I T+
Sbjct: 277 PGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVS-AYGFQGQKCSAASRLILTQGAY 335
Query: 324 PKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ 383
+++ + + E+ DL +V+ ++ S ++ K ++V GG+R E +
Sbjct: 336 EPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGE 395
Query: 384 -LKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
IAPT+ +VP + I +EEIFGP+L ++ V
Sbjct: 396 GYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 8e-47
Identities = 86/339 (25%), Positives = 143/339 (42%), Gaps = 41/339 (12%)
Query: 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTT 158
A ++EE EEI+E + K+ + + EI++ + K + +
Sbjct: 82 AELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITK--------ESASFPGRVHGRI 132
Query: 159 YPSSAE-----IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS 213
PS+ + GVV VIS WN+P LS+ V A+A GNAVV+KP+ P T
Sbjct: 133 SPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGG 192
Query: 214 LL-AKLLEDYVDNSA------VRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVM-- 262
++ A++ E+ A + V GA +E I +TGS VGR V
Sbjct: 193 VIPARIFEE-----AGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGEL 247
Query: 263 AAAAKHLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK 320
A + V LELGG +P VV D+ I+ G ++ + GQ C+ ++ +I
Sbjct: 248 AINGGPMKTVALELGGNAPFVVLADADIDAAAQA--AAVGAFL-HQGQICMSINRVIVDA 304
Query: 321 DFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGG 377
+ ++ +K +P + ++N + L + E + + G
Sbjct: 305 AVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKI-ELAKKEGATVQVEG 363
Query: 378 QRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
+ + P + DV D I +EEIFGPL+ ++
Sbjct: 364 PIE--GRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 4e-46
Identities = 84/349 (24%), Positives = 155/349 (44%), Gaps = 31/349 (8%)
Query: 83 RKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142
R E R + + +A+++ +E+I + K+++K +SE+ T A +E
Sbjct: 57 RALSYIE-RAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEE 114
Query: 143 LK----------YWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG 192
+ K K ++ EP+G+VL IS +NYP L+ +
Sbjct: 115 GLRMEGEVLEGGSFEAASKKKIAVV--------RREPVGLVLAISPFNYPVNLAGSKIAP 166
Query: 193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQ--KWDKI 249
A+ AGN + KP + LLA+ + + + G +E + + + I
Sbjct: 167 ALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFI 226
Query: 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309
+TGS +G + A + P++LELGGK A+V +L++T + IIAG +GQ
Sbjct: 227 NFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGA-FGYSGQR 283
Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
C V ++ + A +L++ +R ++ NP + D++ +++ + L+ D
Sbjct: 284 CTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLI-NDAN 342
Query: 370 SD--KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
+ +R+ I P + V D + EE FGP+LPI+ V+
Sbjct: 343 DKGATALTEIKREG--NLICPILFDKVTTDMRLAWEEPFGPVLPIIRVT 389
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 4e-46
Identities = 91/349 (26%), Positives = 164/349 (46%), Gaps = 31/349 (8%)
Query: 83 RKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142
+ +E R+ + + A+++EE++E I E I +++KP I E+S T + E
Sbjct: 66 KIRPIHE-RVDLLYAWADLLEERKEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADE 123
Query: 143 LK----------YWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIG 192
+ K +L EPLGVVL IS +NYP L+ +
Sbjct: 124 ALRLNGETLKGDQFKGGSSKKIALV--------EREPLGVVLAISPFNYPVNLAAAKIAP 175
Query: 193 AIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQ--KWDKI 249
A+ GN VV KP+ + + + L D ++VV G + L + D I
Sbjct: 176 ALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMI 235
Query: 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQA 309
+TG G + A + PV+LELGGK PA+V +L++T +I++G + +GQ
Sbjct: 236 TFTGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGA-FSYSGQR 292
Query: 310 CIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV 369
C + + A +L+ +++ +++ +P + D++ +++ A + L+ +D +
Sbjct: 293 CTAIKRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLI-DDAL 351
Query: 370 SD--KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
+ ++ G +R ++PT+L DV + EE FGP+LPI+ V
Sbjct: 352 ENGATLLSGNKRQG--NLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVK 398
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 5e-46
Identities = 83/352 (23%), Positives = 147/352 (41%), Gaps = 34/352 (9%)
Query: 83 RKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142
R E R++ ++ A++IE + E + + KP + E+ +LA +
Sbjct: 72 RDMPGTE-RLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAA-VGEVKAAVDRLRLAELD 129
Query: 143 LK---------YWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGA 193
LK WT L EPLGVV I+ +NYP +++ + +
Sbjct: 130 LKKIGGDYIPGDWTYDTLETEGLV--------RREPLGVVAAITPFNYPLFDAVNKITYS 181
Query: 194 IAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLE-QKWDKILY 251
GNAVV+KPS P +++ K L D A+ ++ E ++ + + +
Sbjct: 182 FIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSF 241
Query: 252 TGSPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQAC 310
TGS VG V+ K +ELGG PA+V +L + +I G + GQ C
Sbjct: 242 TGSTEVGERVVKVGGVKQYV---MELGGGDPAIVLEDADLDLAADKIARGI-YSYAGQRC 297
Query: 311 IGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKV 369
+ ++ + KL++ + L +P + D+ +++P + + + ED V
Sbjct: 298 DAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAI-EDAV 356
Query: 370 SD--KIVYGGQRDEKQLKIAPTILL---DVPDDSTIMKEEIFGPLLPIVTVS 416
+++ GG+R + PT + D D + K E+F P+ V V
Sbjct: 357 EKGGRVLAGGRRLGPTY-VQPTFVEAPADRVKDMVLYKREVFAPVALAVEVK 407
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 7e-46
Identities = 94/350 (26%), Positives = 150/350 (42%), Gaps = 63/350 (18%)
Query: 98 IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
A+++ E+ + + +E + D KP ET +++ + ++ A
Sbjct: 83 AADIMRERNDALSTLETL--DTGKPIQETIVADPTS-------GADAFEFFGGI-----A 128
Query: 153 KTSLT--TYPSSAE---IISEPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKP 204
++L P + PLGV + I WNYP ++ P A+ AGNA+V KP
Sbjct: 129 PSALNGDYIPLGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAAP---ALVAGNAMVFKP 185
Query: 205 SEIAPATSSLLAKLLE-----DYVDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRV 257
SE P + +A++L + N V++G +T LL K+ TGS
Sbjct: 186 SENTPLGALKIAEILIEAGLPKGLFN----VIQGD-RDTGPLLVNHPDVAKVSLTGSVPT 240
Query: 258 GRIVMAAAAKHLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDY 315
GR V AAAA HL V +ELGGKSP +V D+ I V ++GQ C
Sbjct: 241 GRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAV---GGAMLGNFYSSGQVCSN--- 294
Query: 316 IITTKDFAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKV 369
T+ F K LK +P++ L +V+ ++ S +++ K
Sbjct: 295 --GTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKA 352
Query: 370 SD-KIVYGGQRDEKQLK----IAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
++ GG + PT+ DV DD TI +EEIFGP++ ++
Sbjct: 353 EGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLD 402
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 1e-45
Identities = 95/347 (27%), Positives = 161/347 (46%), Gaps = 30/347 (8%)
Query: 83 RKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142
+ + R + + +IA I+EK+EE+ + + D KP + E+ + + KLA
Sbjct: 51 KNLPITK-RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQA-RVEVERSIGTFKLAAFY 108
Query: 143 LKYW---TKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNA 199
+K P + T EP+G+V I+ +N+P LS + AIA GN
Sbjct: 109 VKEHRDEVIPSDDRLIFT--------RREPVGIVGAITPFNFPLNLSAHKIAPAIATGNV 160
Query: 200 VVLKPSEIAPATSSLLAKLLEDYVDNS-----AVRVVEGAVAETSALLEQ--KWDKILYT 252
+V PS AP LAK++E+ + ++ GA + K + I +T
Sbjct: 161 IVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFT 220
Query: 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIG 312
GS +VG ++ A + LELGG +P +V +L +I G GQ CI
Sbjct: 221 GSSKVGELITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGS-FIYAGQVCIS 277
Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD 371
V I+ + A K I+ N+ K NP++ K D+ +++ H + ++ E + +
Sbjct: 278 VGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVV-EKAIDE 336
Query: 372 --KIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
K++ GG+RD+ PTI L+V D+ + K E F P++PI+ +
Sbjct: 337 GGKLLLGGKRDKAL--FYPTI-LEVDRDNILCKTETFAPVIPIIRTN 380
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 2e-45
Identities = 80/345 (23%), Positives = 155/345 (44%), Gaps = 51/345 (14%)
Query: 98 IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
IA+ I+E E + +E + D K + + + Y +
Sbjct: 103 IADKIKEHREALARLETL--DTGKT--------LEESYADMDDIHNVFMYFAGLADKDGG 152
Query: 153 KTSLTTYPSS-AEIISEPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPSEIA 208
+ + P + ++I+ EP+GVV I+ WNYP L + + P A+A G ++V+KPSEI
Sbjct: 153 EMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAP---ALATGCSLVMKPSEIT 209
Query: 209 PATSSLLAKLLEDY-----VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIV 261
P T+ + +L+E+ N ++ GA +E ++ + D + +TG G+ +
Sbjct: 210 PLTTIRVFELMEEVGFPKGTIN----LILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHI 265
Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
M AA ++T + LELGGK+P ++ + ++ + + G + GQ C ++
Sbjct: 266 MKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNG-GYFHAGQVCSA-----GSRI 319
Query: 322 FAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIV 374
I D L + K N ++ ++ +++ H ++ S +D K I
Sbjct: 320 LVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIA 379
Query: 375 YGGQRDEKQLK-----IAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
GG+R ++ PT++ + I++EE+FGP++ +
Sbjct: 380 VGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEG 424
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 161 bits (411), Expect = 7e-45
Identities = 87/351 (24%), Positives = 145/351 (41%), Gaps = 63/351 (17%)
Query: 98 IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
A +I E+ + I +E I + K I+ + A + ++Y
Sbjct: 89 AARIIRERRDNIAKLEVI--NNGKT--------ITEAEYDIDAAWQCIEYYAGLA----P 134
Query: 153 KTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPS 205
S + EPLGV I WNYPF+++ P A+A GNAVV KPS
Sbjct: 135 TLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAP---ALACGNAVVFKPS 191
Query: 206 EIAPATSSLLAKLLE-----DYVDNSAVRVVEGAVAETSALLE-QKWDKILYTGSPRVGR 259
+ P T +LA++ + N VV+G S L K+ +TGS G+
Sbjct: 192 PMTPVTGVILAEIFHEAGVPVGLVN----VVQGGAETGSLLCHHPNVAKVSFTGSVPTGK 247
Query: 260 IVMAAAAKHLTPVILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317
VM +AK + V LELGGKSP ++ D + V R GQ C
Sbjct: 248 KVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAV---RGALMANFLTQGQVCTN----- 299
Query: 318 TTKDFAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD 371
T+ F + I E+ + +P+ ++ + +++ ++ + + K
Sbjct: 300 GTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEG 359
Query: 372 -KIVYGGQRDEKQLK-------IAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
+++ GG+ ++P +L + DD T +KEEIFGP++ ++
Sbjct: 360 ARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLP 410
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 160 bits (408), Expect = 2e-44
Identities = 97/342 (28%), Positives = 158/342 (46%), Gaps = 48/342 (14%)
Query: 98 IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
+A++I ++EE+ IE++ ++ KP I+ + Y + +
Sbjct: 94 VADLILARQEELALIESL--EVGKP--------IAQARGEIGFCADLWSYAAGQARALEG 143
Query: 153 KTSLTTYPSS-AEIISEPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPSEIA 208
+T ++ EP+GVV +I+ WN+PF+++ + AI +G VVLKPSE
Sbjct: 144 QTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPW---AIGSGCTVVLKPSEFT 200
Query: 209 PATSSLLAKLLE-----DYVDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIV 261
TS LA+L D V N VV G +L + D + +TGS RVG +
Sbjct: 201 SGTSIRLAELAREAGIPDGVFN----VVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKL 256
Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
AA+ + V LELGGK P +V + +L I G N GQ CI ++
Sbjct: 257 GEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYG-VYHNAGQCCIS-----GSRL 310
Query: 322 FAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIV 374
+ I D+L L + K +P+ + + +++ H ++ S + S +++
Sbjct: 311 LVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELL 370
Query: 375 YGGQR--DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
GG+R E L APT+ V D +I +EEIFGP+L +T
Sbjct: 371 LGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLT 412
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 2e-43
Identities = 79/338 (23%), Positives = 141/338 (41%), Gaps = 40/338 (11%)
Query: 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTT 158
+ E ++II I ++ ++ I E+ T + A+ +
Sbjct: 76 RGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVK-------E 127
Query: 159 YPSSAE-----IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS 213
PS E I PLGV+ IS +N+P LS+ + AIA GN+VV KP +
Sbjct: 128 VPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGG 187
Query: 214 LL-AKLLEDY-----VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAA 265
+ AK E V N V+ V E + I +TGS VGR + A
Sbjct: 188 TIIAKAFEHAGLPAGVLN----VMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIA 243
Query: 266 AKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK----D 321
+ + LELGG +P V S ++ I GK++ + GQ C+ ++ II + +
Sbjct: 244 GRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFI-HQGQICMIINRIIVHQDVYDE 302
Query: 322 FAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQ 378
F K ++ +L +G + + K + ++N + +++ +D ++ G+
Sbjct: 303 FVEKFTARVK-QLP--YG-DQTDPKTVVGPLINERQIEKALEIIE-QAKTDGIELAVEGK 357
Query: 379 RDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
R + P + + ++S I + E+F P+ I+
Sbjct: 358 RVG--NVLTPYVFVGADNNSKIAQTELFAPIATIIKAG 393
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 3e-43
Identities = 91/338 (26%), Positives = 147/338 (43%), Gaps = 44/338 (13%)
Query: 98 IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
+A++IE + +EA+ + K ++ ++ +K L+Y W
Sbjct: 92 LADLIERDRLLLATMEAM--NGGKLFSNAYLMDLGG-------CIKTLRYCAGWAD---- 138
Query: 153 KTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPS 205
K T P + EP+GV I WN+P L+ + P A++ GN VV+KP+
Sbjct: 139 KIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGP---ALSCGNTVVVKPA 195
Query: 206 EIAPATSSLLAKLLE-----DYVDNSAVRVVEGAVAET-SALLE-QKWDKILYTGSPRVG 258
E P T+ + L++ V N +V G +A+ DK+ +TGS VG
Sbjct: 196 EQTPLTALHMGSLIKEAGFPPGVVN----IVPGYGPTAGAAISSHMDVDKVAFTGSTEVG 251
Query: 259 RIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317
+++ AA K +L V LELGGKSP +V + +L G + GQ CI +
Sbjct: 252 KLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQG-VFYHQGQCCIAASRLF 310
Query: 318 TTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVY 375
+ + + K++ NP+ ++ + ++ L++ K K+
Sbjct: 311 VEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLEC 370
Query: 376 GGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412
GG K I PT+ DV DD I KEEIFGP+ I
Sbjct: 371 GGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQI 408
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 2e-42
Identities = 96/338 (28%), Positives = 152/338 (44%), Gaps = 44/338 (13%)
Query: 98 IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKA 152
+A++IE + +E + D KP +++ ++ M LK L+Y W
Sbjct: 91 LADLIERDRTYLAALETL--DNGKPYVISYLVDLDM-------VLKCLRYYAGWAD---- 137
Query: 153 KTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPS 205
K T P + S EP+GV I WN+P L+ L P A+A GN VV+K +
Sbjct: 138 KYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGP---ALATGNVVVMKVA 194
Query: 206 EIAPATSSLLAKLLE-----DYVDNSAVRVVEGAVAET-SALLE-QKWDKILYTGSPRVG 258
E P T+ +A L++ V N +V G +A+ + DK+ +TGS +G
Sbjct: 195 EQTPLTALYVANLIKEAGFPPGVVN----IVPGFGPTAGAAIASHEDVDKVAFTGSTEIG 250
Query: 259 RIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317
R++ AA +L V LELGGKSP ++ S ++ + N GQ
Sbjct: 251 RVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA-LFFNQGQCSCAGSRTF 309
Query: 318 TTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIVY 375
+D + ++ K NP +SK + V+ F ++ ++ K K++
Sbjct: 310 VQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLC 369
Query: 376 GGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412
GG ++ I PT+ DV D TI KEEIFGP++ I
Sbjct: 370 GGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQI 407
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 3e-42
Identities = 63/341 (18%), Positives = 119/341 (34%), Gaps = 34/341 (9%)
Query: 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKL---ALKELKYWTKP-EKAK 153
IA+ +E + ++II H + + P EI+ T + +L + Y +
Sbjct: 61 IASELEARSDDIIARAHLETALPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPN 119
Query: 154 TSLTTYPSS-AEIISEPLGVVLVISTWNYPFLLSLDPVIG-----AIAAGNAVVLKPSEI 207
+ P LG V V N+P S G A+AAG V++K
Sbjct: 120 PTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFS---AAGGDTASALAAGCPVIVKGHTA 176
Query: 208 APATSSLLAKLLEDYVDNS-----AVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRI 260
P TS ++A+ +E + +++G L + + +TGS GR
Sbjct: 177 HPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRA 236
Query: 261 VMAAAAKHLTPV--ILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYI 316
+ A + P+ ELG +P + + + +A M GQ C +
Sbjct: 237 LFNLAHERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTM-GCGQFCTKPGVV 295
Query: 317 ITTKD-FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVY 375
I++ ++ +++ S L+ + + +++ S +D + + +
Sbjct: 296 FALNTPETQAFIETAQSLIRQQ-----SPSTLLTPGIRDSYQSQVVSRGSDDGI--DVTF 348
Query: 376 GGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
+ +EEIFGP IV
Sbjct: 349 SQAESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCE 389
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 3e-42
Identities = 69/367 (18%), Positives = 130/367 (35%), Gaps = 27/367 (7%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
+V A + + + + + R + A ++ E+ ++ K +
Sbjct: 569 EVGDA---IAAAKAAFPAWRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQA 625
Query: 125 FISEISMTKSSCKLALKELKY---WTKPEKAKTSLTTYPS-SAEIISEPLGVVLVISTWN 180
++++ A+ L+Y + P EP GV VI+ WN
Sbjct: 626 -YADVT-------EAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWN 677
Query: 181 YPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETS 239
+P +S+ AI GN VV KPS I L +L + + G +
Sbjct: 678 FPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMG 737
Query: 240 ALL--EQKWDKILYTGSPRVGRIVMAAAAK------HLTPVILELGGKSPAVVDSTINLQ 291
L I +TGS G ++ AAK ++ +I E+GGK+ ++D +L
Sbjct: 738 DYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLD 797
Query: 292 VTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESK-DLSR 350
++ GQ C +I K I+ L + K + +
Sbjct: 798 EAVPHVLYSA-FGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGA 856
Query: 351 IVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTILLDVPDDSTIMKEEIFGPL 409
+ + + + K ++Y + + TI+ + + I +EEIFGP+
Sbjct: 857 VADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPV 916
Query: 410 LPIVTVS 416
L ++
Sbjct: 917 LAVMRAK 923
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 3e-41
Identities = 84/349 (24%), Positives = 159/349 (45%), Gaps = 56/349 (16%)
Query: 98 IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---W-TKPEK 151
IA +IE+ +E+ +E + D + + + ++ A + + + +
Sbjct: 95 IAELIEKHADELAVMECL--DAGQV--------LRIVRAQVARAAENFAFYAEYAEHAME 144
Query: 152 AKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKPSEIA 208
+T + P G V +I+ WN P +LS + P A+A GN VVLKP+E +
Sbjct: 145 DRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAP---ALAFGNTVVLKPAEWS 201
Query: 209 PATSSLLAKLLEDY-----VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIV 261
P T++ LA++L++ V N +V+G E A L + TG G+IV
Sbjct: 202 PFTATKLAEILKEADLPPGVFN----LVQGFGEEAGAALVAHPLVPLLTLTGETETGKIV 257
Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
M AA HL + ELGGKSPA+V + +L+ ++ + NG+ C +++
Sbjct: 258 MRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQ-IFSFNGERCTA-----SSRL 311
Query: 322 FAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVSD-KIV 374
+ I + ++ E +P++ + ++ +++P H R+ ++ K +++
Sbjct: 312 LVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLL 371
Query: 375 YGGQRDEKQLK---------IAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
GG+R + + + PT+ + + I +EEIFGP+L +
Sbjct: 372 VGGERAKTSFRGEDLSRGNYLLPTVFVGE-NHMKIAQEEIFGPVLVAIP 419
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 6e-41
Identities = 85/346 (24%), Positives = 146/346 (42%), Gaps = 52/346 (15%)
Query: 98 IANMIEEKEEEI--IEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---W-TKPEK 151
+A+++E+ +EE+ IEA+ D + + M +++ +Y W K +
Sbjct: 107 LADVMEQHQEELATIEAL--DAGAVYTLALKTHVGM-------SIQTFRYFAGWCDKIQ- 156
Query: 152 AKTSLTTYPSSAEIIS----EPLGVVLVISTWNYPFLLS---LDPVIGAIAAGNAVVLKP 204
T ++ EP+GV ++ WNYP ++ +AAGN VV+KP
Sbjct: 157 GATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAA---CLAAGNTVVIKP 213
Query: 205 SEIAPATSSLLAKLLE-----DYVDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRV 257
+++ P T+ A+L V N ++ G+ + L KI +TGS V
Sbjct: 214 AQVTPLTALKFAELTLKAGIPKGVVN----ILPGSGSLVGQRLSDHPDVRKIGFTGSTEV 269
Query: 258 GRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYI 316
G+ +M + A ++ V LELGGKSP ++ + +L + ++ N G+ CI
Sbjct: 270 GKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSS-VFFNKGENCIA---- 324
Query: 317 ITTKDFAPKLI-DSLRNELKEFFGK----NPMESK-DLSRIVNPFHFARLASLLDEDKVS 370
+ F + I + ++ E K NP+E + + H +L
Sbjct: 325 -AGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKE 383
Query: 371 D-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
+V GG + PT+ DV D I KEE FGP++ I
Sbjct: 384 GATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISR 429
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 149 bits (379), Expect = 2e-40
Identities = 49/264 (18%), Positives = 107/264 (40%), Gaps = 22/264 (8%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIG-----AIAAGNAVVLKPSEIAPATSSLLAKLLEDY 222
P+G+V +I+ +N+P V G A+ GN + K + S + K++
Sbjct: 156 NPVGLVGIITAFNFPVA-----VYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKV 210
Query: 223 VDNSAV-----RVVEGAVAETSALLEQKW-DKILYTGSPRVGRIVMAAAAKHLTPVILEL 276
++++ + + G +A+ + + + + +TGS +VG+ V + +LEL
Sbjct: 211 LEDNKLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLEL 270
Query: 277 GGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE 336
GG + + +L + + + GQ C + + ++++ L+ +
Sbjct: 271 GGNNAIIAFEDADLSLVVPSALFAA-VGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQ 329
Query: 337 FFGKNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQR-DEKQLKIAPTILL 392
NP + + + + E+ + +VYGG+ D + PTI+
Sbjct: 330 IRVGNPWDPNVLYGPLHTKQAVSMFLGAV-EEAKKEGGTVVYGGKVMDRPGNYVEPTIVT 388
Query: 393 DVPDDSTIMKEEIFGPLLPIVTVS 416
+ D++I E F P+L +
Sbjct: 389 GLGHDASIAHTETFAPILYVFKFQ 412
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 148 bits (377), Expect = 3e-40
Identities = 73/353 (20%), Positives = 138/353 (39%), Gaps = 53/353 (15%)
Query: 91 RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPE 150
R+ ++ A ++ + +E+ I ++ KP +E+ +E++ + ++++ +
Sbjct: 66 RIELLERFAATLKSRADELARVIGEETGKPLWES-ATEVTSMVNKVAISVQAFR------ 118
Query: 151 KAKTSLTTYPSSAE----IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSE 206
+ + A+ + +P GVV V +N+P L ++ A+ AGN VV KPSE
Sbjct: 119 --ERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSE 176
Query: 207 IAPATSSLLAKLLE-----DYVDNSAVRVVEGAVAETSALLEQKW-DKILYTGSPRVGRI 260
+ P + L K V N +V+G AL + D + +TGS R G +
Sbjct: 177 LTPKVAELTLKAWIQAGLPAGVLN----LVQGGRETGVALAAHRGLDGLFFTGSSRTGNL 232
Query: 261 VMA-AAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITT 319
+ + + + LE+GG +P VV+ +L II + GQ C ++
Sbjct: 233 LHSQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSA-FISAGQRCTCARRLLVP 291
Query: 320 KD-----FAPKLIDSLRN--------ELKEFFGKNPMESKDLSRIVNPFHFARLASLLDE 366
+ +L+ + F G + ++ L E
Sbjct: 292 QGAWGDALLARLVAVSATLRVGRFDEQPAPFMG--AV--------ISLSAAEHLLKAQ-E 340
Query: 367 DKVSD--KIVYGGQRDEKQLK-IAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
+ + + + + P I LDV + EE FGPLL ++ S
Sbjct: 341 HLIGKGAQPLLAMTQPIDGAALLTPGI-LDVSAVAERPDEEFFGPLLQVIRYS 392
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 7e-40
Identities = 78/366 (21%), Positives = 149/366 (40%), Gaps = 38/366 (10%)
Query: 66 VEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125
+ A +L K+ R+ + R + IAN ++E E+E+ + + ++ K E+
Sbjct: 32 INLAHALYKKWRH-------EEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSES- 83
Query: 126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLL 185
E+ + S C KP K + +A + + GV++ WN+P
Sbjct: 84 KEEVELCVSICNYYADHGPEMLKPTKLNSD----LGNAYYLKQSTGVIMACEPWNFPLYQ 139
Query: 186 SLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLE- 243
+ GN ++LK + P +++L AK+++ ++ + + + + ++
Sbjct: 140 VIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIAD 199
Query: 244 QKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWM 303
+ + TGS R G V AA K+L +ELGG +V + QV + +
Sbjct: 200 PRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDAR-T 258
Query: 304 ANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKD----LSRIVNPFHFAR 359
N+GQ C II K +++ L+N +P+E+ ++
Sbjct: 259 YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNS--------- 309
Query: 360 LASLLD--EDKVSD------KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLL 410
+ E +V + K+ Y D K PTIL D+ D+ + +E+FGP+
Sbjct: 310 -EKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIA 368
Query: 411 PIVTVS 416
+ V
Sbjct: 369 EVFVVE 374
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 2e-39
Identities = 78/348 (22%), Positives = 139/348 (39%), Gaps = 31/348 (8%)
Query: 84 KTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKEL 143
K S R ++ I + EE+ + I +++ KP + +E++ + + C +
Sbjct: 46 KMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQA-RAEVTKSAALCDWYAEHG 104
Query: 144 KYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLK 203
PE A I PLGV+L I WN+P L + + AGN+ +LK
Sbjct: 105 PAMLNPEPTLVEN----QQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLK 160
Query: 204 PSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLE-QKWDKILYTGSPRVGRIV 261
+ + ++A++L + V S ++ + + TGS R G +
Sbjct: 161 HAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAI 220
Query: 262 MAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321
A A L +LELGG P +V + +L++ + +AG+ N GQ C I +
Sbjct: 221 GAQAGAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGR-YQNTGQVCAAAKRFIVEEG 279
Query: 322 FAPKLIDSLRNELKEFFGKNPMESKD----LSRIVNPFHFARLASLLD--EDKVSD---- 371
A D +P+ ++ ++R L D +V
Sbjct: 280 IAQAFTDRFVAAAAALKMGDPLVEENDLGPMAR----------FDLRDELHQQVQASVAE 329
Query: 372 --KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
+++ GG++ + A T+L DV D T ++E+FGP+ I
Sbjct: 330 GARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAK 377
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 3e-39
Identities = 54/350 (15%), Positives = 120/350 (34%), Gaps = 44/350 (12%)
Query: 98 IANMIEEKEEEIIEAIHKDLSKPPFETFI---SEISMTKSSCKLA--LKELKYWTKPEKA 152
I +++ K + + ++ + I KL L E+
Sbjct: 75 IVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAE 134
Query: 153 KTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS 212
S S+ ++S GV L I+ +N+P + A+ +G V++KP+ +
Sbjct: 135 SLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLT 194
Query: 213 SLLAKLLEDYVD--NSAVRVVEGAVAET-SALLEQKWDKILYTGSPRVGRIVMAAAAK-- 267
+ + D A+ ++ G+ A + D + +TGS + A A
Sbjct: 195 QRMVADVVDAGILPPGALSIICGSSAGLLDQIRSF--DVVSFTGSADTAATLRAHPAFVQ 252
Query: 268 HLTPVILELGGKSPAVV-----DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDF 322
+ ++ + A++ T + + ++ +GQ C + F
Sbjct: 253 RGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREM-TVKSGQKCTA-----IRRAF 306
Query: 323 AP-KLIDSLRNELKEFFGK----NPM-ESKDLSRIVNPFHFAR----LASLLDEDKVSDK 372
P ++ + LK K NP ++ + +V+ + +A+L +E +
Sbjct: 307 VPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREE---AVL 363
Query: 373 IVYGGQRDEKQLK------IAPTILL--DVPDDSTIMKEEIFGPLLPIVT 414
+AP + + D + + + E+FGP+ +
Sbjct: 364 AYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAP 413
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 2e-38
Identities = 54/357 (15%), Positives = 120/357 (33%), Gaps = 49/357 (13%)
Query: 89 EWR-MSQ------IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALK 141
E+ SQ ++ + + + + ++ E + + K
Sbjct: 22 EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYK 81
Query: 142 ELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVV 201
+ + E+ T I+EP+G++ I P ++ + ++ N ++
Sbjct: 82 DEQTCGILEEDDNLGTMT------IAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGII 135
Query: 202 LKPSEIAPATSSLLAKLLEDYVDNS-----AVRVVEGAVAE-TSALLEQ-KWDKILYTGS 254
P A +++ AKL+ D + + ++ E ++AL++ IL TG
Sbjct: 136 FSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGG 195
Query: 255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVD 314
P + + AA P I G P V+D T +++ ++ K +NG C
Sbjct: 196 PGMVK----AAYSSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSK-TFDNGVVCASEQ 250
Query: 315 YIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIV 374
+I + ++ + + + ++ + +++ L + ++ KIV
Sbjct: 251 AVIVVDEVYDEVKERFASHKAHV--LSKTDADKVRKVL-----------LIDGALNAKIV 297
Query: 375 ----------YGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSA 421
G + + L V D E+ P L + A
Sbjct: 298 GQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAHEK-LSPTLGMFRADNFEDA 353
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 147 bits (372), Expect = 2e-38
Identities = 78/359 (21%), Positives = 153/359 (42%), Gaps = 17/359 (4%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
++A + + R + R + ++ A+++E + I + ++ K +
Sbjct: 548 TPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDA 607
Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
+SE+ C+ + + E A T S + GV + IS WN+P
Sbjct: 608 -LSELREAADFCRYYAAQGRKLFGSETAMPGPT--GESNALTMRGRGVFVAISPWNFPLA 664
Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVV--EGAVAETSAL 241
+ L V A+ AGN+VV KP+E P + LL + + SA+ +V +G + AL
Sbjct: 665 IFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRIGA--AL 722
Query: 242 LE-QKWDKILYTGSPRVGRIVMAAAAKH---LTPVILELGGKSPAVVDSTINLQVTTRRI 297
+++TGS V R + A A + P+I E GG + + D+T + +
Sbjct: 723 TAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDV 782
Query: 298 IAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPME-SKDLSRIVNPFH 356
+ + GQ C + + +D A ++I+ + +E +P + + + +++
Sbjct: 783 VTSA-FRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEA 841
Query: 357 FARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
RL + + K ++ + G E +AP I ++ + EE+FGP+L +V
Sbjct: 842 KQRLDAHIARMKTEARLHFAGPAPEGCF-VAPHIFELT--EAGQLTEEVFGPILHVVRY 897
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 1e-37
Identities = 82/264 (31%), Positives = 130/264 (49%), Gaps = 22/264 (8%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-- 222
+ LGV I WN+PF L + A+ GN +V+KPSE P + AK++++
Sbjct: 138 LFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGL 197
Query: 223 ---VDNSAVRVVEGAVAETSALLEQ--KWDKILYTGSPRVGRIVMAAAAKHLTPVILELG 277
V N +V G L K + TGS G +MA AAK++T V LELG
Sbjct: 198 PRGVFN----LVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVCLELG 253
Query: 278 GKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335
GK+PA+V D+ + L V I+ + + N+GQ C + + K + ++ L ++
Sbjct: 254 GKAPAIVMDDADLELAVKA--IVDSR-VINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQ 310
Query: 336 EFFGKNPMESKDLSR--IVNPFHFARLASLLDEDKVSD--KIVYGGQR-DEKQLKIAPTI 390
NP E D++ ++N R+ + V + ++ +GG+ + K PT+
Sbjct: 311 AVQFGNPAERNDIAMGPLINAAALERVEQKVA-RAVEEGARVAFGGKAVEGKGYYYPPTL 369
Query: 391 LLDVPDDSTIMKEEIFGPLLPIVT 414
LLDV + +IM EE FGP+LP+V
Sbjct: 370 LLDVRQEMSIMHEETFGPVLPVVA 393
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 1e-37
Identities = 71/390 (18%), Positives = 137/390 (35%), Gaps = 64/390 (16%)
Query: 54 MAAEEKQMQRFD-----VEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEE 108
M+ E+K ++ +E A KEL S + + +++IA+ E+
Sbjct: 1 MSLEDKDLRSIQEVRNLIESANKAQKELA-------AMSQQQIDTIVKAIADAGYGAREK 53
Query: 109 IIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEI-IS 167
+ + H++ ++ + + A K + + K K L + ++
Sbjct: 54 LAKMAHEETGFGIWQDKVIKN-------VFASKHVYNYIKDMKTIGMLKEDNEKKVMEVA 106
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNS- 226
PLGVV + P + + +I AGN++V P A +++ + + +
Sbjct: 107 VPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAG 166
Query: 227 ----AVRVVEGAVAE-TSALLEQ-KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKS 280
A+ + + T L++ IL TG + + AA TP I G
Sbjct: 167 CPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVK----AAYSSGTPAIGVGPGNG 222
Query: 281 PAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGK 340
PA ++ + N+ + I+ K +NG C ++ + +I R + F
Sbjct: 223 PAFIERSANIPRAVKHILDSK-TFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHF--L 279
Query: 341 NPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQL-KIAPTILLDVPDDST 399
+ E+ L + + L ++ IV K + IA L VP D+
Sbjct: 280 SDAEAVQLGKFI----------LRPNGSMNPAIV------GKSVQHIANLAGLTVPADAR 323
Query: 400 I-------------MKEEIFGPLLPIVTVS 416
+ E P+L T
Sbjct: 324 VLIAEETKVGAKIPYSREKLAPILAFYTAE 353
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 4e-33
Identities = 66/347 (19%), Positives = 116/347 (33%), Gaps = 44/347 (12%)
Query: 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLT 157
IA+ IE + E I E ++ P E T +L ++ +
Sbjct: 94 IADEIEARAEAITEIGSQETGLPEARL-NGERGRTTGQLRLFADHIE--KGDYLDRRVDA 150
Query: 158 TYPSSA-------EIISEPLGVVLVISTWNYPFLLSLDPVIG-----AIAAGNAVVLKPS 205
P ++ P+G V V N+P S G A+AAG VV+K
Sbjct: 151 AMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLAFS---TAGGDTAAALAAGCPVVVKGH 207
Query: 206 EIAPATSSLLAKLLEDYVDNS-----AVRVVEGAVAETSALLEQ--KWDKILYTGSPRVG 258
P T ++A+ ++ + + +++G + L Q + +TGS G
Sbjct: 208 SAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGG 267
Query: 259 RIVMAAAAKHLTPV--ILELGGKSPAVV--DSTINLQVTTRRIIAGKWMANNGQACI--G 312
R + A P+ ELG +P + ++ T + AG GQ C G
Sbjct: 268 RALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPG 327
Query: 313 VDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDK 372
+ +I D + + L + + + A + V K
Sbjct: 328 IAVVIEGADA-DRFTTAAVEALAKVAPQTMLTDGIAKAYR-----DGQARFATRNAV--K 379
Query: 373 IVYGGQRDEKQLKIAPTILLDVPDD---STIMKEEIFGPLLPIVTVS 416
+ + + +P + + EE+FGPL +V V
Sbjct: 380 PLLATESSGRDA--SPNLFETTGAQFLADHALGEEVFGPLGLVVRVG 424
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 4e-31
Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 17/263 (6%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
I P GVV+ I+ WN+P L+ + A+ GN +VLKP++ P ++ L ++ ++ +
Sbjct: 144 IHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGL 203
Query: 224 DNSAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
+ + V+ G + L + I TGS G+ + +A+++TPV+LELGGK+P
Sbjct: 204 PDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMTPVMLELGGKAP 263
Query: 282 AVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
VV D+ ++ + G+ AN GQ C V+ + + + +K
Sbjct: 264 MVVMDDADLDKAAED--ALWGR-FANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKV 320
Query: 340 KNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKI-----APTIL 391
+PM++ + N + ++ + + + GG+ + PT+L
Sbjct: 321 GDPMDADSQMGPKCNQREIDNIDHIVH-EAIKQGATVATGGKTATVEGFEGGCWYEPTVL 379
Query: 392 LDVPDDSTIMKEEIFGPLLPIVT 414
+DV D+ ++ EE FGP+LPIV
Sbjct: 380 VDVKQDNIVVHEETFGPILPIVK 402
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 5e-29
Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 17/263 (6%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE---- 220
++ +P+GV VI+ WN+P + V A+AAG VV+KP+E P ++ LA+L
Sbjct: 142 VLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGI 201
Query: 221 -DYVDNSAVRVVEGAVAETSALLEQKW-DKILYTGSPRVGRIVMAAAAKHLTPVILELGG 278
V N + A A+ KI +TGS G+I++ AA + V +ELGG
Sbjct: 202 PSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSVKRVSMELGG 261
Query: 279 KSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTK----DFAPKLIDSLRNEL 334
+P +V + N+ +A K N GQ C+ + + + F ++++ L
Sbjct: 262 LAPFIVFDSANVDQAVAGAMASK-FRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNL 320
Query: 335 KEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEK-QLKIAPTIL 391
+ G E ++N ++ ++ D VS +V GG+R + + PT+L
Sbjct: 321 R--VGNGFEEGTTQGPLINEKAVEKVEKQVN-DAVSKGATVVTGGKRHQLGKNFFEPTLL 377
Query: 392 LDVPDDSTIMKEEIFGPLLPIVT 414
+V D EE FGPL P++
Sbjct: 378 CNVTQDMLCTHEETFGPLAPVIK 400
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 7e-29
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 14/260 (5%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
+ P+GV +I WN+P + + A+AAG V+KP+ P T +++ +
Sbjct: 143 VHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDL 202
Query: 224 DNSAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
+ V +V G + +L + D + +TGS VGR ++ A+ + + LELGG +P
Sbjct: 203 PDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQVKKLALELGGNAP 262
Query: 282 AVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
+V D+ + +IA K GQ C+ + I + A L + +
Sbjct: 263 FIVFDDADLEAAADN--LIANK-FRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTV 319
Query: 340 KNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDE--KQLKIAPTILLDV 394
+ M D+ ++N F ++ L D + +V G Q E L PT++ V
Sbjct: 320 GDGMNDGIDIGPLINKQGFDKVKRHLQ-DALDKGASLVAGKQPAELGDGLFFPPTVVQGV 378
Query: 395 PDDSTIMKEEIFGPLLPIVT 414
+ +EE FGPL+P+
Sbjct: 379 DREMCCYQEETFGPLVPMAL 398
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 1e-28
Identities = 72/259 (27%), Positives = 125/259 (48%), Gaps = 13/259 (5%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
+I +P+GV I+ WN+P + A+AAG +VLKP+ P ++ LA+L V
Sbjct: 141 VIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGV 200
Query: 224 DNSAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
VV G+ L K+ +TGS +GR +M AK + V LELGG +P
Sbjct: 201 PAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAP 260
Query: 282 AVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
+V D+ ++ V +A K N GQ C+ + + + + L+ + +
Sbjct: 261 FIVFDDADLDKAVEG--ALASK-FRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHI 317
Query: 340 KNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEK-QLKIAPTILLDVP 395
+ +++ + +++ A++ + D + ++V GG+ E+ PTIL+DVP
Sbjct: 318 GDGLDNGVTIGPLIDEKAVAKVEEHIA-DALEKGARVVCGGKAHERGGNFFQPTILVDVP 376
Query: 396 DDSTIMKEEIFGPLLPIVT 414
++ + KEE FGPL P+
Sbjct: 377 ANAKVSKEETFGPLAPLFR 395
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-28
Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 13/259 (5%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
++ EP+GV I+ WN+P + V A+AAG +V+KP+E P ++ +A L E V
Sbjct: 144 VVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGV 203
Query: 224 DNSAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
+ VV G + K+ +TGS VGR++MA +A + + LELGG +P
Sbjct: 204 PKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTVKKLTLELGGNAP 263
Query: 282 AVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
+V D+ ++ V IA K NNGQ C+ + + D L + +
Sbjct: 264 FIVFDDADLDAAVEG--AIASK-YRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKV 320
Query: 340 KNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEK-QLKIAPTILLDVP 395
ES L ++N ++ S + D ++ ++ GG+R PT+L V
Sbjct: 321 GRGTESGATLGPLINEAAVKKVESHIA-DALAKGASLMTGGKRHALGHGFFEPTVLTGVK 379
Query: 396 DDSTIMKEEIFGPLLPIVT 414
D + KEE FGPL P+
Sbjct: 380 PDMDVAKEETFGPLAPLFR 398
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 2e-28
Identities = 73/258 (28%), Positives = 123/258 (47%), Gaps = 13/258 (5%)
Query: 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-V 223
+I +P+GV I+ WN+P + A+AAG ++++P+++ P T+ L L E +
Sbjct: 164 VIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGI 223
Query: 224 DNSAVRVVEGAVAETSALLEQKWD--KILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281
+++V G E A L K+ +TGS VGR++MA A + + LELGG +P
Sbjct: 224 PAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIKRISLELGGNAP 283
Query: 282 AVV--DSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG 339
+V D+ ++ V + K N GQ C+ + I + K + L ++KE
Sbjct: 284 FIVFDDADLDAAVDG--AMVSK-YRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKV 340
Query: 340 KNPMESK-DLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLKIAPTILLDVPD 396
N E + ++ ++ + ++ D VS K++ GG+ P IL V
Sbjct: 341 GNGTEPGVVIGPMIEEKAITKVKAHIE-DAVSKGAKLITGGKELGGLF-FEPGILTGVTS 398
Query: 397 DSTIMKEEIFGPLLPIVT 414
D + KEE FGPL P+
Sbjct: 399 DMLVAKEETFGPLAPLFA 416
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 2e-27
Identities = 68/260 (26%), Positives = 119/260 (45%), Gaps = 19/260 (7%)
Query: 168 EPLGVVLVISTWNYPFLLSL--DPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----- 220
P+GVV I+ +N+P ++ P+ AIA GN +LKPSE P + L +L E
Sbjct: 140 YPIGVVGGIAPFNFPMMVPCWMFPM--AIALGNTFILKPSERTPLLTEKLVELFEKAGLP 197
Query: 221 DYVDNSAVRVVEGAVAETSALLEQKWDK-ILYTGSPRVGRIVMAAAAKHLTPVILELGGK 279
V N VV GA + +LE K I + GS VG V +++L V G K
Sbjct: 198 KGVFN----VVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGSENLKRVQSLTGAK 253
Query: 280 SPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF-F 338
+ +V + NL+ T I+ + + G+ C+ + + A + + L+ ++ +
Sbjct: 254 NHTIVLNDANLEDTVTNIVGAAFGS-AGERCMACAVVTVEEGIADEFMAKLQEKVADIKI 312
Query: 339 GKNPMESKDLSRIVNPFHFARLASLLD--EDKVSDKIVYG-GQRDEKQLKIAPTILLDVP 395
G + L ++ + R S ++ ++ + + G + + PTI +V
Sbjct: 313 GNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVT 372
Query: 396 DDSTIMKEEIFGPLLPIVTV 415
+ TI K+EIF P+L ++ V
Sbjct: 373 TEMTIWKDEIFAPVLSVIRV 392
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 8e-27
Identities = 58/271 (21%), Positives = 96/271 (35%), Gaps = 36/271 (13%)
Query: 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED------ 221
G V IS +N+ + + GN V+ KPS+ A S + ++L +
Sbjct: 199 GLEGFVAAISPFNFT-AIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPN 257
Query: 222 ---YVDNSAVRVVEGAVA--ETSALLEQKWDKILYTGSPRVGRIVMAAAA------KHLT 270
+V + + I +TGS + + A +
Sbjct: 258 IIQFVPADGPTFGDTVTSSEHLCG--------INFTGSVPTFKHLWRQVAQNLDRFRTFP 309
Query: 271 PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330
+ E GGK+ V S+ ++ + + GQ C + K P++ L
Sbjct: 310 RLAGECGGKNFHFVHSSADVDSVVSGTLRSAF-EYGGQKCSACSRLYVPKSLWPQIKGRL 368
Query: 331 RNELKEFFGKNPMESKDLSRIVNP----FHFARLASLLDEDKVSDK--IVYGGQRDEKQ- 383
E +P E D + FAR+ L+ + S I+ GGQ +E
Sbjct: 369 LEEHSRIKVGDPAE--DFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVG 426
Query: 384 LKIAPTILLDVPDDSTIMKEEIFGPLLPIVT 414
+ P I+ IMKEEIFGP+L +
Sbjct: 427 YYVEPCIIESKDPQEPIMKEEIFGPVLTVYV 457
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 4e-24
Identities = 68/269 (25%), Positives = 111/269 (41%), Gaps = 33/269 (12%)
Query: 168 EPLGVVLVISTWNYPFLLSL--DPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----- 220
+P+G+ I+ +N+P ++ + AIA GNA +LKPSE P+ LA+L+
Sbjct: 161 QPVGIGAGITPFNFPGMIPMWMFAP--AIACGNAFILKPSERDPSVPIRLAELMIEAGLP 218
Query: 221 DYVDNSAVRVVEGAVAETSALLEQKWDK-ILYTGSPRVGRIVMAAAAKHLTPVILELGGK 279
+ N VV G A+L + + GS + R V AA + G K
Sbjct: 219 AGILN----VVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAK 274
Query: 280 SPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII-----TTKDFAPKLIDSLRNEL 334
+ ++ +L +I G + G+ C+ + + T KL+ + + L
Sbjct: 275 NHMIIMPDADLDQAANALI-GAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVES-L 332
Query: 335 KEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSD--KIVYGGQRDEKQLK------I 386
+ + D+ +V R+ SL+D + K+V G RD K I
Sbjct: 333 RIGPYTDE--KADMGPVVTKEAEQRIRSLIDSG-IEQGAKLVVDG-RDFKLQGYENGHFI 388
Query: 387 APTILLDVPDDSTIMKEEIFGPLLPIVTV 415
+ DV D I K EIFGP+L +V
Sbjct: 389 GGCLFDDVTPDMDIYKTEIFGPVLSVVRA 417
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.8 bits (149), Expect = 3e-10
Identities = 72/459 (15%), Positives = 145/459 (31%), Gaps = 134/459 (29%)
Query: 1 MRNPSVRAFQDFSTGAACLNKS---FIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAE 57
+ N + QD L+K I + T L F S +
Sbjct: 30 VDNFDCKDVQDMPKSI--LSKEEIDHIIMSKDAVSGTL----RL----FWTLLSK----Q 75
Query: 58 EKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIAN---MIEEKEEEIIEAIH 114
E+ +Q+F VE+ LR NY ++ MS I++ M+ E + ++
Sbjct: 76 EEMVQKF-VEEV------LRINY--------KFLMSPIKTEQRQPSMMTRMYIEQRDRLY 120
Query: 115 KDLSKPPF-ETFISEISMTKSSCKLALKELKYWTKPEK----------AKTSLTTYPSSA 163
D F + +S + + AL EL +P K KT +
Sbjct: 121 ND--NQVFAKYNVSRLQP-YLKLRQALLEL----RPAKNVLIDGVLGSGKTWVA-----L 168
Query: 164 EIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYV 223
++ +Y +D I + N P + LL ++ ++
Sbjct: 169 DVCL------------SYKVQCKMDFKIFWLNLKN--CNSPETVLEMLQKLLYQIDPNWT 214
Query: 224 DNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKH-LTPVIL-ELGGKSP 281
S + S+ ++ + I + R++ + ++ L ++L + ++
Sbjct: 215 SRS----------DHSSNIKLRIHSI----QAELRRLLKSKPYENCL--LVLLNV--QNA 256
Query: 282 AVVDSTINLQ----VTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN----E 333
++ NL +TTR + D++ L E
Sbjct: 257 KAWNA-FNLSCKILLTTR------------FKQV-TDFLSAATTTHISLDHHSMTLTPDE 302
Query: 334 LKEFFGKN-PMESKDLSR---IVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPT 389
+K K +DL R NP + +A + + + +L
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGL--ATWDNWKHVNCDKLTTIIE 360
Query: 390 ILLDV--PDDSTIMKE-----EIFGP---LLPIVTVSIV 418
L+V P + ++ +F P +P + +S++
Sbjct: 361 SSLNVLEPAE---YRKMFDRLSVF-PPSAHIPTILLSLI 395
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 429 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-88 Score=685.56 Aligned_cols=396 Identities=24% Similarity=0.349 Sum_probs=368.0
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 014211 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 97 (429)
.++|+|||| +|+++.+|.+|+++|| +||++++ .++.++.+|+++||++|++||+.|+++|+.+|.++|++
T Consensus 5 ~~~kl~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~ 74 (490)
T 2wme_A 5 EEQKLYIGG-RYVEASSGATFETINP--------ANGEVLA-KVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRR 74 (490)
T ss_dssp CCBCEECSS-SEECCSSSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred CCCcEEECC-eeeCCCCCCEEEeeCC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 467999999 9999999877777777 9999998 67799999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEc
Q 014211 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 177 (429)
++++|++++++|++++++|+|||+.+++..|+..+++.++|+++..+++.+.... ...+...++.++|+|||++|+
T Consensus 75 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~ 150 (490)
T 2wme_A 75 AVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP----LRETSFVYTRREPLGVVAGIG 150 (490)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEE----EETTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccc----ccCCcceeEEecceeEEEEec
Confidence 9999999999999999999999999997557999999999999988876543321 123556789999999999999
Q ss_pred CCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCC
Q 014211 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS 254 (429)
Q Consensus 178 p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs 254 (429)
|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+| +.+.++.|++|+ +|.|.||||
T Consensus 151 PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS 230 (490)
T 2wme_A 151 AWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGG 230 (490)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESC
T ss_pred cccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECC
Confidence 999999999999999999999999999999999999999999999 99999999999 467899999997 999999999
Q ss_pred hHHHHHHHH-HHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014211 255 PRVGRIVMA-AAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 255 ~~~~~~i~~-~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
+.+|+.+.+ .++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|+|||+++|++|+++|+++
T Consensus 231 ~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 309 (490)
T 2wme_A 231 TSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLER 309 (490)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHH
T ss_pred hHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHh-ccCCCcCCCceeeccchhHHHHHHHHHHHH
Confidence 999998876 455678999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-----CCCceEecEEEecCCCCCCccccCcc
Q 014211 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIF 406 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~f 406 (429)
++++++|+|. +++++||++++.+++++.++|+++. .|+++++||... .+|+|++|||+.+++++|++++||+|
T Consensus 310 ~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiF 389 (490)
T 2wme_A 310 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIF 389 (490)
T ss_dssp HHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCC
T ss_pred HHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhcccc
Confidence 9999999996 6899999999999999999999986 578999999763 25899999999999999999999999
Q ss_pred ccceeeEecCCHHHHHHHHHhh
Q 014211 407 GPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 407 gPv~~v~~~~~~~eai~l~n~~ 428 (429)
|||++|++|+|+||||+++|++
T Consensus 390 GPVl~v~~~~~~deAi~~aN~~ 411 (490)
T 2wme_A 390 GPVMSILVYDDEDEAIRRANDT 411 (490)
T ss_dssp SSEEEEEEESCHHHHHHHHHCS
T ss_pred CCEEEEEEeCCHHHHHHHHhcC
Confidence 9999999999999999999975
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-85 Score=657.99 Aligned_cols=395 Identities=22% Similarity=0.337 Sum_probs=367.3
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 014211 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 98 (429)
..++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|+++
T Consensus 12 ~~~~~I~G-~~~~~~~~~~~~v~~P--------~tg~~i~-~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 81 (484)
T 3ifg_A 12 RHQAYIGG-EWQAADSDATFEVFDP--------ATGESLG-TVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRW 81 (484)
T ss_dssp CCSEEETT-EEECCTTCCEEEEECT--------TTCCEEE-EEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred ccceeECC-EEeeCCCCCEEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 45799999 9999888866666666 9999998 677999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcC
Q 014211 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 178 (429)
+++|+++.++|++++++|+|||..+++ .|+..+++.++|++...+++.+.... ....+...++.++|+|||++|+|
T Consensus 82 a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~---~~~~~~~~~~~~~P~GVv~~I~P 157 (484)
T 3ifg_A 82 FDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDTLP---TPDANKRIVVVKEPIGVCAAITP 157 (484)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEC---CSSTTEEEEEEEEECSSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCcccc---ccCCCceeEEEecCCcEEEEECC
Confidence 999999999999999999999999996 69999999999999988765433221 11234567899999999999999
Q ss_pred CchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCCh
Q 014211 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 179 ~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~ 255 (429)
||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|+ .+.++.|++|+ ++.|.||||+
T Consensus 158 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~ 237 (484)
T 3ifg_A 158 WNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGST 237 (484)
T ss_dssp SSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCH
T ss_pred CcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 999999999994 57899999997 9999999999
Q ss_pred HHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHh
Q 014211 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (429)
Q Consensus 256 ~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~ 335 (429)
.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|++|+++|+++++
T Consensus 238 ~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 316 (484)
T 3ifg_A 238 AVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKY-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVS 316 (484)
T ss_dssp HHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCcccCCCeEEEcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccceee
Q 014211 336 EFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (429)
Q Consensus 336 ~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v 412 (429)
++++|+|. +++++||++++.+++++.++|+++. .|+++++||... ..|+|++|||+.+++++|++++||+||||++|
T Consensus 317 ~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 396 (484)
T 3ifg_A 317 KLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPL 396 (484)
T ss_dssp TCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEE
T ss_pred hccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEE
Confidence 99999996 6899999999999999999999986 578999999763 36999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHhh
Q 014211 413 VTVSIVSSAHFKLKAC 428 (429)
Q Consensus 413 ~~~~~~~eai~l~n~~ 428 (429)
++|+|.||||+++|++
T Consensus 397 ~~~~~~deAi~~aN~~ 412 (484)
T 3ifg_A 397 FRFASEEELVRLANDT 412 (484)
T ss_dssp EEECCHHHHHHHHHCS
T ss_pred EEeCCHHHHHHHHhCC
Confidence 9999999999999975
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-84 Score=657.45 Aligned_cols=396 Identities=21% Similarity=0.312 Sum_probs=370.4
Q ss_pred ccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 014211 17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ 96 (429)
Q Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~ 96 (429)
....++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|+
T Consensus 9 ~~~~~~~I~G-~~~~~~~~~~~~v~~P--------~tg~~i~-~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~ 78 (506)
T 3rh9_A 9 LENLTGYIGG-RWKDSAGGATFDVYNP--------ATGSVIA-KVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLE 78 (506)
T ss_dssp GSCCSEEETT-EEECCCTTCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHH
T ss_pred ccccCeeECC-EEeeCCCCCEEEEECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence 3566899999 9999888866666666 9999998 7779999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEe-ecceEEEE
Q 014211 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIIS-EPLGVVLV 175 (429)
Q Consensus 97 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~ 175 (429)
+++++|++++++|++++++|+|||..+++ .|+..+++.++|++..++++.+.... . ..+...++.+ +|+|||++
T Consensus 79 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~-~---~~~~~~~~~~~~P~GVV~~ 153 (506)
T 3rh9_A 79 DIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIP-E---KPKDCTWTVHYRPVGVTGL 153 (506)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECS-C---CGGGCEEEEEEEECCSEEE
T ss_pred HHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccc-c---CCCceeeEeecccceEEEE
Confidence 99999999999999999999999999997 79999999999999999998764321 1 1345678889 99999999
Q ss_pred EcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEe
Q 014211 176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYT 252 (429)
Q Consensus 176 i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ft 252 (429)
|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ +|.|.||
T Consensus 154 I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FT 233 (506)
T 3rh9_A 154 IVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFT 233 (506)
T ss_dssp ECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEE
T ss_pred ECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999 99999999999 557889999997 9999999
Q ss_pred CChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHH
Q 014211 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (429)
Q Consensus 253 Gs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~ 332 (429)
||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|++|+++|++
T Consensus 234 GS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~ 312 (506)
T 3rh9_A 234 GSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKF-RGGGQTCVCANRIFVHEKVADAFGQKLAE 312 (506)
T ss_dssp SCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSSSSCCEEEEETTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-HhCCCCcccCcEEEEcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CC-CCceEecEEEecCCCCCCccccCcccc
Q 014211 333 ELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DE-KQLKIAPTILLDVPDDSTIMKEEIFGP 408 (429)
Q Consensus 333 ~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgP 408 (429)
+++++++|+|. +++++||++++.+++++.++|+++. .|+++++||.. +. .|+|++|||+.+++++|++++||+|||
T Consensus 313 ~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 392 (506)
T 3rh9_A 313 RVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGP 392 (506)
T ss_dssp HHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSS
T ss_pred HHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCc
Confidence 99999999996 6899999999999999999999986 57899999975 33 689999999999999999999999999
Q ss_pred ceeeEecCCHHHHHHHHHhh
Q 014211 409 LLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 409 v~~v~~~~~~~eai~l~n~~ 428 (429)
|++|++|+|+||||+++|++
T Consensus 393 Vl~v~~~~~~deAi~~aN~~ 412 (506)
T 3rh9_A 393 LVPMALFRTEEEVIDAGNDT 412 (506)
T ss_dssp EEEEEEECCHHHHHHHHTCS
T ss_pred EEEEEEeCCHHHHHHHHhCC
Confidence 99999999999999999975
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-84 Score=658.28 Aligned_cols=394 Identities=21% Similarity=0.327 Sum_probs=366.8
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 014211 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 98 (429)
..++|||| +|+.+.++.+|+++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|+++
T Consensus 32 ~~~~~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~ 101 (504)
T 3ek1_A 32 KSQCLVNG-RWIDAADGTTIKVTNP--------ADGSVIG-TVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKW 101 (504)
T ss_dssp CSSEEETT-EEECCTTCCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred ccCeEECC-EEeeCCCCCEEEEECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHH
Confidence 35799999 9999888866666666 9999998 777999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcC
Q 014211 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 178 (429)
+++|++++++|++++++|+|||+.+++ .|+..+++.++|++...+++.+.... ....+...++.++|+|||++|+|
T Consensus 102 a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~---~~~~~~~~~~~~~P~GVV~~I~P 177 (504)
T 3ek1_A 102 FDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDTIP---APQNGQRLTVIRQPVGVTAAITP 177 (504)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEC---CSSTTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccc---cccccccceeeccCceEEEEECC
Confidence 999999999999999999999999996 69999999999999988765433221 11234567899999999999999
Q ss_pred CchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCCh
Q 014211 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 179 ~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~ 255 (429)
||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+| +.+.++.|++|+ +|.|.||||+
T Consensus 178 wN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~ 257 (504)
T 3ek1_A 178 WNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGST 257 (504)
T ss_dssp SSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 99999999998 457899999997 9999999999
Q ss_pred HHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHh
Q 014211 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (429)
Q Consensus 256 ~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~ 335 (429)
.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|++|+++|+++++
T Consensus 258 ~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 336 (504)
T 3ek1_A 258 EVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKY-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVK 336 (504)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEehhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeE
Q 014211 336 EFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413 (429)
Q Consensus 336 ~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~ 413 (429)
++++|+|. +++++||++++.+++++.++|+++. .|+++++||.. ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 337 ~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 415 (504)
T 3ek1_A 337 ELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLF 415 (504)
T ss_dssp TCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEE
T ss_pred hcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEE
Confidence 99999996 6889999999999999999999986 57899999976 468999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHhh
Q 014211 414 TVSIVSSAHFKLKAC 428 (429)
Q Consensus 414 ~~~~~~eai~l~n~~ 428 (429)
+|+|.||||+++|++
T Consensus 416 ~~~~~deAi~~aN~~ 430 (504)
T 3ek1_A 416 AFDTEEEVIAQANDT 430 (504)
T ss_dssp EECCHHHHHHHHHCS
T ss_pred EeCCHHHHHHHHhCC
Confidence 999999999999985
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-84 Score=655.15 Aligned_cols=397 Identities=22% Similarity=0.327 Sum_probs=367.6
Q ss_pred ccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHH
Q 014211 15 GAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQ 94 (429)
Q Consensus 15 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~ 94 (429)
++....++|||| +|+.+.++++++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++
T Consensus 21 ~m~~~~~~~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~ 90 (497)
T 3i44_A 21 SMLNKRKFYING-LWDDPSTPHDLYVIDP--------STEEACA-VISLGSTRDADKAINAAKKAFQTWKTTSPHERLGF 90 (497)
T ss_dssp -CEEECCEEETT-EEECCSSCCEEEEEET--------TTTEEEE-EEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred ccccccCeeECC-EEecCCCCCeEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHH
Confidence 445677999999 9999988766666555 9999988 67799999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEE-eecceEE
Q 014211 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEII-SEPLGVV 173 (429)
Q Consensus 95 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv 173 (429)
|++++++|+++.++|++++++|+|||+.+++..|+..+++.+++++..++.+...... ..+...++. ++|+|||
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~GVv 165 (497)
T 3i44_A 91 VEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-----IEGNEQAILHYDAIGVV 165 (497)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-----STTCSSCEEEEEECCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-----cCCceeEEEeecCceEE
Confidence 9999999999999999999999999999997579999999999999988876542211 124457788 9999999
Q ss_pred EEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEE
Q 014211 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKIL 250 (429)
Q Consensus 174 ~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ 250 (429)
++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|++|+ +|.|.
T Consensus 166 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~ 245 (497)
T 3i44_A 166 GLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMIS 245 (497)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEE
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEE
Confidence 9999999999999999999999999999999999999999999999999 99999999999 567899999997 99999
Q ss_pred EeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHH
Q 014211 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (429)
Q Consensus 251 ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 330 (429)
||||+.+|+.|.+.++++++|+++|+|||||+||++||| +.|++.+++++| +|+||.|++++|||||+++|++|+++|
T Consensus 246 FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l 323 (497)
T 3i44_A 246 FTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCF-YNSGQSCNAPTRMLVEQAIYDKAIKTA 323 (497)
T ss_dssp EESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHH
T ss_pred EeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHH-hcCCCCcccCCEEEEcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 999999999999 999999999999999999999999999
Q ss_pred HHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCc-cCC---CCceEecEEEecCCCCCCccccC
Q 014211 331 RNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQ-RDE---KQLKIAPTILLDVPDDSTIMKEE 404 (429)
Q Consensus 331 ~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~-~~~---~g~~~~Ptvl~~~~~~~~~~~~E 404 (429)
+++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||. ... .|+|++|||+.+++++|++++||
T Consensus 324 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE 403 (497)
T 3i44_A 324 KDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREE 403 (497)
T ss_dssp HHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSC
T ss_pred HHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCc
Confidence 9999999999996 5899999999999999999999985 5789999994 322 68999999999999999999999
Q ss_pred ccccceeeEecCCHHHHHHHHHhh
Q 014211 405 IFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 405 ~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+||||++|++|+|++|||+++|++
T Consensus 404 iFGPVl~v~~~~~~deAi~~aN~~ 427 (497)
T 3i44_A 404 IFGPVLSLLPFNTEDEAVTLANDT 427 (497)
T ss_dssp CCSSEEEEEEESSHHHHHHHHHCS
T ss_pred ccCceEEEEecCCHHHHHHHHhCC
Confidence 999999999999999999999975
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-84 Score=657.09 Aligned_cols=399 Identities=27% Similarity=0.382 Sum_probs=369.8
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh-----hhcCCCHHHHH
Q 014211 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN-----SRKTKSYEWRM 92 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~-----~w~~~~~~~R~ 92 (429)
...++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+ .|+.++..+|.
T Consensus 6 ~~~~~~i~g-~~~~~~~~~~~~~~nP--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~ 75 (503)
T 3iwj_A 6 PTRQLFING-DWKAPVLNKRIPVINP--------ATQNIIG-DIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRA 75 (503)
T ss_dssp CCCCEEETT-EEECCTTCCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHH
T ss_pred CCCceeECC-EEecCCCCCeEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHH
Confidence 346799999 9999988766666665 9999988 6779999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceE
Q 014211 93 SQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGV 172 (429)
Q Consensus 93 ~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv 172 (429)
++|++++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++..+++.+...........+...++.++|+||
T Consensus 76 ~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 154 (503)
T 3iwj_A 76 RYLRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGV 154 (503)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCce
Confidence 999999999999999999999999999999996 6999999999999999988765442221111234567899999999
Q ss_pred EEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEE
Q 014211 173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKI 249 (429)
Q Consensus 173 v~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v 249 (429)
|++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+ .+.++.|+.|+ +|.|
T Consensus 155 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I 234 (503)
T 3iwj_A 155 VGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKV 234 (503)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEE
T ss_pred EEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEE
Confidence 99999999999999999999999999999999999999999999999999 999999999994 57889999997 9999
Q ss_pred EEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHH
Q 014211 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDS 329 (429)
Q Consensus 250 ~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~ 329 (429)
.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||+++|++|+++
T Consensus 235 ~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~ 313 (503)
T 3iwj_A 235 AFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCF-WTNGQICSATSRLILHESIATEFLNR 313 (503)
T ss_dssp EEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHT-GGGGCCTTCEEEEEEETTTHHHHHHH
T ss_pred EEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCCcccCCeeEEcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC---CCCceEecEEEecCCCCCCccccC
Q 014211 330 LRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD---EKQLKIAPTILLDVPDDSTIMKEE 404 (429)
Q Consensus 330 l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~---~~g~~~~Ptvl~~~~~~~~~~~~E 404 (429)
|+++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||... ..|+|++|||+.+++++|++++||
T Consensus 314 l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE 393 (503)
T 3iwj_A 314 IVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREE 393 (503)
T ss_dssp HHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSC
T ss_pred HHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCce
Confidence 99999999999996 5889999999999999999999986 578999999764 468999999999999999999999
Q ss_pred ccccceeeEecCCHHHHHHHHHhh
Q 014211 405 IFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 405 ~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+||||++|++|+|++|||+++|++
T Consensus 394 iFGPVl~v~~~~~~deAi~~aN~~ 417 (503)
T 3iwj_A 394 VFGPVLCVKTFSTEEEAIDLANDT 417 (503)
T ss_dssp CCSSEEEEEEESSHHHHHHHHTCS
T ss_pred eeCceEEEEEeCCHHHHHHHHhCC
Confidence 999999999999999999999975
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-84 Score=657.83 Aligned_cols=396 Identities=21% Similarity=0.314 Sum_probs=368.5
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 014211 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 97 (429)
...++|||| +|+.+.++ +|+++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|++
T Consensus 24 ~~~~~~I~G-~~~~~~~~-~~~v~nP--------~tg~~i~-~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~ 92 (498)
T 4f3x_A 24 MDTQLLIGS-RFEAGTEA-EEHILNP--------RTGAGII-DLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLK 92 (498)
T ss_dssp CCCCEEETT-EEECCCSC-EEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred cccCeeECC-EEeeCCCC-eEEEECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 346899999 99998776 6777766 8999988 67799999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEc
Q 014211 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 177 (429)
++++|+++.++|++++++|+|||+.++...|+..+++.++|+++.++++.+..... ...+...++.++|+|||++|+
T Consensus 93 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~I~ 169 (498)
T 4f3x_A 93 IADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGE---YLPGHTSMIRRDPIGIVGSIA 169 (498)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEE---EETTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccC---CcccccceEEEcCcceEEEEC
Confidence 99999999999999999999999999944799999999999999988765433211 123556789999999999999
Q ss_pred CCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCCh
Q 014211 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 178 p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~ 255 (429)
|||||+...++++++||++||+||+|||+.+|+++.++++++.+++|+|++|+|+| +.+.++.|++|+ +|.|.||||+
T Consensus 170 PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~ 249 (498)
T 4f3x_A 170 PWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDI 249 (498)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTTSCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCH
T ss_pred CCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHhCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999 556899999997 9999999999
Q ss_pred HHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHh
Q 014211 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (429)
Q Consensus 256 ~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~ 335 (429)
.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||+++|++|+++|+++++
T Consensus 250 ~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 328 (498)
T 4f3x_A 250 ATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGY-YNAGQDCTAACRIYAEAGIYEKLVADLTSAVS 328 (498)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHH-hcCCCCccCCceEEecHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCC-EEEeCCcc-CCCCceEecEEEecCCCCCCccccCcccccee
Q 014211 336 EFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (429)
Q Consensus 336 ~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~-~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~ 411 (429)
++++|+|. +++++||++++.+++++.++|+++. .|+ ++++||.. +..|+|++|||+.+++++|++++||+||||++
T Consensus 329 ~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 408 (498)
T 4f3x_A 329 TIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVS 408 (498)
T ss_dssp TCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred hcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEE
Confidence 99999996 5899999999999999999999986 577 99999976 35799999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHhh
Q 014211 412 IVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 412 v~~~~~~~eai~l~n~~ 428 (429)
|++|+|.||||+++|++
T Consensus 409 v~~~~~~deAi~~aN~~ 425 (498)
T 4f3x_A 409 VTRFTGKDDAVAWANDS 425 (498)
T ss_dssp EEEECTTSCHHHHHHSS
T ss_pred EEEeCCHHHHHHHHhcC
Confidence 99999999999999975
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-84 Score=658.81 Aligned_cols=397 Identities=21% Similarity=0.337 Sum_probs=369.4
Q ss_pred ccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHh--hhhcCCCHHHHHHH
Q 014211 17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNY--NSRKTKSYEWRMSQ 94 (429)
Q Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~--~~w~~~~~~~R~~~ 94 (429)
....++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++|| +.|+.+++.+|.++
T Consensus 30 ~~~~~~~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~ 99 (520)
T 3ed6_A 30 HLSQRQYIDG-EWVESANKNTRDIINP--------YNQEVIF-TVSEGTKEDAERAILAARRAFESGEWSQETAETRGKK 99 (520)
T ss_dssp GSCCSEEETT-EEECCTTCCEEEEEET--------TTTEEEE-EEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHH
T ss_pred ccCCceEECC-EEecCCCCCEEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHH
Confidence 3466899999 9999888766666555 9999998 677999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEE
Q 014211 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVL 174 (429)
Q Consensus 95 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 174 (429)
|++++++|+++.++|++++++|+|||+.+++ .|+..+++.++|++...+++.+... .. ...+...++.++|+|||+
T Consensus 100 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~-~~--~~~~~~~~~~~~P~GVV~ 175 (520)
T 3ed6_A 100 VRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMI-DS--PIPDTESKIVKEPVGVVT 175 (520)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEEE-CC--SSTTEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeec-cc--CCCCCcccccccCccEEE
Confidence 9999999999999999999999999999997 6999999999999999887655332 11 113456789999999999
Q ss_pred EEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEE
Q 014211 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILY 251 (429)
Q Consensus 175 ~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~f 251 (429)
+|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|++|+ +|.|.|
T Consensus 176 ~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~F 255 (520)
T 3ed6_A 176 QITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSF 255 (520)
T ss_dssp EECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEE
T ss_pred EECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999999 567899999997 999999
Q ss_pred eCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHH
Q 014211 252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR 331 (429)
Q Consensus 252 tGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 331 (429)
|||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||+++|++|+++|+
T Consensus 256 TGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 334 (520)
T 3ed6_A 256 TGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALI 334 (520)
T ss_dssp ESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGTSTTCCCEEEEEHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCcccCceEEEcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-----CCCceEecEEEecCCCCCCccccC
Q 014211 332 NELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEE 404 (429)
Q Consensus 332 ~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E 404 (429)
++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||... ..|+|++|||+.+++++|++++||
T Consensus 335 ~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eE 414 (520)
T 3ed6_A 335 DRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEE 414 (520)
T ss_dssp HHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSC
T ss_pred HHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCc
Confidence 999999999996 6889999999999999999999986 477999999763 468999999999999999999999
Q ss_pred ccccceeeEecCCHHHHHHHHHhh
Q 014211 405 IFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 405 ~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+||||++|++|+|+||||+++|++
T Consensus 415 iFGPVl~v~~~~~~deAi~~aN~~ 438 (520)
T 3ed6_A 415 VFGPVVTVEGFETEQEAIQLANDS 438 (520)
T ss_dssp CCSSEEEEEEESSHHHHHHHHTCS
T ss_pred eeCcEEEEEEeCCHHHHHHHHhCC
Confidence 999999999999999999999975
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-84 Score=658.67 Aligned_cols=403 Identities=20% Similarity=0.311 Sum_probs=370.4
Q ss_pred hhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCCc-chhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCC
Q 014211 9 FQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKS 87 (429)
Q Consensus 9 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~ 87 (429)
+.++....+.+.++|||| +|+. ++.+++++|| +| |++++ .++.++.+|+++|+++|++||+.|+.++
T Consensus 27 ~~~~~~~~~~~~~~~I~G-~~~~--~~~~~~~~nP--------~t~~~~i~-~~~~~~~~dv~~av~aA~~A~~~w~~~~ 94 (538)
T 3qan_A 27 LGLVEKELGKEYPLIING-ERVT--TEDKIQSWNP--------ARKDQLVG-SVSKANQDLAEKAIQSADEAFQTWRNVN 94 (538)
T ss_dssp HHHHHHHTTEEECEEETT-EEEC--CSSEEEEECS--------SSTTCEEE-EEECBCHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHhhhccCcccceeECC-EEec--CCCeEEEECC--------CCCCcEEE-EEcCCCHHHHHHHHHHHHHHHHhhccCC
Confidence 344444556678999999 9998 5655555555 99 99888 7779999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEe
Q 014211 88 YEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIIS 167 (429)
Q Consensus 88 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (429)
+.+|.++|++++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++.+.++..++.... ..+...++.+
T Consensus 95 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~ 170 (538)
T 3qan_A 95 PEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILS---RPGEQNRYFY 170 (538)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCC---CTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeecc---cCCcceeeec
Confidence 99999999999999999999999999999999999997 5999999999999998655555443322 1255678999
Q ss_pred ecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC
Q 014211 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK 245 (429)
Q Consensus 168 ~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~ 245 (429)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|++|+
T Consensus 171 ~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p 250 (538)
T 3qan_A 171 TPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHP 250 (538)
T ss_dssp EECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCT
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999 567899999997
Q ss_pred -CCEEEEeCChHHHHHHHHHHhcc------cCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEE
Q 014211 246 -WDKILYTGSPRVGRIVMAAAAKH------LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIIT 318 (429)
Q Consensus 246 -v~~v~ftGs~~~~~~i~~~~~~~------~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V 318 (429)
+|.|.||||+.+|+.|.+.++++ ++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++|||
T Consensus 251 ~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV 329 (538)
T 3qan_A 251 KTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAF-GFSGQKCSAGSRAVI 329 (538)
T ss_dssp TEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEE
T ss_pred CcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCccCceeEE
Confidence 99999999999999999999988 9999999999999999999999999999999999 999999999999999
Q ss_pred eCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCC-CCceEecEEEecCCC
Q 014211 319 TKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE-KQLKIAPTILLDVPD 396 (429)
Q Consensus 319 ~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~-~g~~~~Ptvl~~~~~ 396 (429)
|+++|++|+++|+++++++++|+|. +++++||++++.+++++.++|+++...+++++||..+. .|+|++|||+.++++
T Consensus 330 ~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~ 409 (538)
T 3qan_A 330 HKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDP 409 (538)
T ss_dssp ETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEECCCEECSSSCEECCEEEESCCT
T ss_pred ehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCCeEEeCCCcCCCCCceeCCeeeecCCC
Confidence 9999999999999999999999996 68999999999999999999999865339999998744 699999999999999
Q ss_pred CCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 397 DSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 397 ~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+|++++||+||||++|++|+|++|||+++|++
T Consensus 410 ~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~ 441 (538)
T 3qan_A 410 EAVIMQEEIFGPVVAFSKANDFDHALEIANNT 441 (538)
T ss_dssp TSHHHHSCCCSSEEEEEEESSHHHHHHHHHCS
T ss_pred CChhhCCCcCCcEEEEEEeCCHHHHHHHHhcC
Confidence 99999999999999999999999999999975
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-84 Score=657.36 Aligned_cols=397 Identities=20% Similarity=0.304 Sum_probs=366.0
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQS 97 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~ 97 (429)
.++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+ .|+.+++.+|.++|++
T Consensus 37 ~~~~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~ 106 (517)
T 2o2p_A 37 YQLFIGG-EFVDAEGSKTYNTINP--------TDGSVIC-QVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYR 106 (517)
T ss_dssp CSEEETT-EEECCGGGCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHH
T ss_pred CCeEECC-EEecCCCCCeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHH
Confidence 4689999 9999877755555555 9999998 6779999999999999999999 9999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccc-cCCCCcceEEeecceEEEEE
Q 014211 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSL-TTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i 176 (429)
++++|+++.++|++++++|+|||+.+++..|+..+++.++|+++.++++.+... +... ...+...++.++|+|||++|
T Consensus 107 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~~P~GVV~~I 185 (517)
T 2o2p_A 107 LADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATI-PINQARPNRNLTLTKKEPVGVCGIV 185 (517)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEE-CCCCCTTSCEEEEEEEEECCEEEEE
T ss_pred HHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-cccccCCCCceEEEEecCCccEEEE
Confidence 999999999999999999999999999646999999999999999988765432 1110 01122568999999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeC
Q 014211 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftG 253 (429)
+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+| +.+.++.|++|+ ++.|.|||
T Consensus 186 ~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTG 265 (517)
T 2o2p_A 186 IPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265 (517)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEES
T ss_pred CCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999999 456889999997 99999999
Q ss_pred ChHHHHHHHHHHh-cccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHH
Q 014211 254 SPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (429)
Q Consensus 254 s~~~~~~i~~~~~-~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~ 332 (429)
|+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|++|+++|++
T Consensus 266 S~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~ 344 (517)
T 2o2p_A 266 STEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVF-FNKGENCIAAGRLFVEESIHNQFVQKVVE 344 (517)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEeHHHHHHHHHHHHH
Confidence 9999999999999 899999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC-CCceEecEEEecCCCCCCccccCccccc
Q 014211 333 ELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 333 ~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (429)
+++++++|+|. +++++||++++.+++++.++|+++. .|+++++||..+. .|+|++|||+.+++++|++++||+||||
T Consensus 345 ~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 424 (517)
T 2o2p_A 345 EVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPI 424 (517)
T ss_dssp HHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSE
T ss_pred HHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccE
Confidence 99999999996 6899999999999999999999986 5789999997643 6899999999999999999999999999
Q ss_pred eeeEecCC--HHHHHHHHHhh
Q 014211 410 LPIVTVSI--VSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~--~~eai~l~n~~ 428 (429)
++|++|+| ++|||+++|++
T Consensus 425 l~v~~~~~~~~deAi~~aN~~ 445 (517)
T 2o2p_A 425 MIISRFADGDVDAVLSRANAT 445 (517)
T ss_dssp EEEEEECTTCSHHHHHHHTCS
T ss_pred EEEEEcCCCCHHHHHHHHhcC
Confidence 99999999 99999999975
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-84 Score=654.21 Aligned_cols=396 Identities=24% Similarity=0.345 Sum_probs=367.4
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHH
Q 014211 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMSQ 94 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~---~w~~~~~~~R~~~ 94 (429)
...++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+ .|+.+++.+|.++
T Consensus 19 ~~~~~~i~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~ 88 (501)
T 1bxs_A 19 KYTKIFINN-EWHSSVSGKKFPVFNP--------ATEEKLC-EVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRL 88 (501)
T ss_dssp CCCSEEETT-EEECCTTCCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHH
T ss_pred cccCeeECC-EEecCCCCCeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHH
Confidence 345789999 9999877755555555 9999998 7779999999999999999999 8999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEE
Q 014211 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVL 174 (429)
Q Consensus 95 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 174 (429)
|++++++|++++++|++++++|+|||+.++...|+..+++.++|+++.++++.+..... ..+...++.++|+|||+
T Consensus 89 L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~----~~~~~~~~~~~P~GVV~ 164 (501)
T 1bxs_A 89 LNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM----DGNFFTYTRSEPVGVCG 164 (501)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC----SSSEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec----cCCcceeEEecCCceEE
Confidence 99999999999999999999999999998766799999999999999999887643211 12345688999999999
Q ss_pred EEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEE
Q 014211 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILY 251 (429)
Q Consensus 175 ~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~f 251 (429)
+|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+| +.+.++.|++|+ +|.|.|
T Consensus 165 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~F 244 (501)
T 1bxs_A 165 QIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAF 244 (501)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999999 667899999997 999999
Q ss_pred eCChHHHHHHHHHHh-cccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHH
Q 014211 252 TGSPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (429)
Q Consensus 252 tGs~~~~~~i~~~~~-~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 330 (429)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|
T Consensus 245 TGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l 323 (501)
T 1bxs_A 245 TGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRS 323 (501)
T ss_dssp ESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEchhHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccc
Q 014211 331 RNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFG 407 (429)
Q Consensus 331 ~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fg 407 (429)
+++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||..+ ..|+|++|||+.+++++|.+++||+||
T Consensus 324 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG 403 (501)
T 1bxs_A 324 VERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFG 403 (501)
T ss_dssp HHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCS
T ss_pred HHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhccccc
Confidence 9999999999996 5899999999999999999999986 577999999763 468999999999999999999999999
Q ss_pred cceeeEecCCHHHHHHHHHhh
Q 014211 408 PLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 408 Pv~~v~~~~~~~eai~l~n~~ 428 (429)
||++|++|+|+||||+++|++
T Consensus 404 PVl~v~~~~~~deAi~~aN~~ 424 (501)
T 1bxs_A 404 PVQQIMKFKSLDDVIKRANNT 424 (501)
T ss_dssp SEEEEEEECCHHHHHHHHHCS
T ss_pred ceEEEEEeCCHHHHHHHHhcC
Confidence 999999999999999999975
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-83 Score=652.20 Aligned_cols=398 Identities=23% Similarity=0.326 Sum_probs=368.4
Q ss_pred ccccccceeeecceeeccCCccc-cccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHH
Q 014211 15 GAACLNKSFIYNYTYRKNQTHIS-FPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMS 93 (429)
Q Consensus 15 ~~~~~~~~~i~g~~~~~~~~~~~-~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~ 93 (429)
...+..++|||| +|+.+.++.+ ++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.+
T Consensus 15 ~~~~~~~~~i~g-~~~~~~~~~~~~~v~nP--------~tg~~i~-~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~ 84 (503)
T 1a4s_A 15 VVVTDDLNYWGG-RRIKSKDGATTEPVFEP--------ATGRVLC-QMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSR 84 (503)
T ss_dssp CCCCSCCEEETT-EEECCCTTCCCEEEECT--------TTCCEEE-EECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred ccccccceeECC-EEecCCCCCceEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHH
Confidence 344556799999 9999877755 566555 9999998 7779999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEE
Q 014211 94 QIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV 173 (429)
Q Consensus 94 ~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 173 (429)
+|++++++|+++.++|++++++|+|||+.++. .|+..+++.++|+++..+++.+... ... .+...++.++|+|||
T Consensus 85 ~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~-~~~---~~~~~~~~~~P~GVv 159 (503)
T 1a4s_A 85 VMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHI-QLP---GGAFAYTRREPLGVC 159 (503)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEE-ECG---GGCEEEEEEEECSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcc-cCC---CCceeEEEEecCceE
Confidence 99999999999999999999999999999995 6999999999999999988765322 111 234678999999999
Q ss_pred EEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEE
Q 014211 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILY 251 (429)
Q Consensus 174 ~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~f 251 (429)
++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+|+.+.++.|++|+ +|.|.|
T Consensus 160 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~F 239 (503)
T 1a4s_A 160 AGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSF 239 (503)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEE
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEE
Confidence 9999999999999999999999999999999999999999999999999 99999999999447889999997 999999
Q ss_pred eCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHH
Q 014211 252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR 331 (429)
Q Consensus 252 tGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 331 (429)
|||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+
T Consensus 240 TGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 318 (503)
T 1a4s_A 240 TGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVV 318 (503)
T ss_dssp ESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHH
T ss_pred eCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEehHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-------CCCceEecEEEecCCCCCCccc
Q 014211 332 NELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-------EKQLKIAPTILLDVPDDSTIMK 402 (429)
Q Consensus 332 ~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-------~~g~~~~Ptvl~~~~~~~~~~~ 402 (429)
++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||..+ ..|+|++|||+.+++++|++++
T Consensus 319 ~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~ 398 (503)
T 1a4s_A 319 KRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVK 398 (503)
T ss_dssp HHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHH
T ss_pred HHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHh
Confidence 999999999996 5899999999999999999999986 478999999764 3589999999999999999999
Q ss_pred cCccccceeeEecCCHHHHHHHHHhh
Q 014211 403 EEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 403 ~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
||+||||++|++|+|++|||+++|++
T Consensus 399 eEiFGPVl~v~~~~~~deAi~~aN~~ 424 (503)
T 1a4s_A 399 EEIFGPVMSVLPFDTEEEVLQRANNT 424 (503)
T ss_dssp SCCCSSEEEEEEECCHHHHHHHHHCS
T ss_pred ccccCceEEEEecCCHHHHHHHHhcC
Confidence 99999999999999999999999975
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-83 Score=654.90 Aligned_cols=397 Identities=24% Similarity=0.351 Sum_probs=369.9
Q ss_pred ccccceeeecceeeccCCccccccccCCceEeeeCCc-chhhhhcccCCCHHHHHHHHHHHHHHh--hhhcCCCHHHHHH
Q 014211 17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNY--NSRKTKSYEWRMS 93 (429)
Q Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~~~~~dv~~av~aA~~A~--~~w~~~~~~~R~~ 93 (429)
.+..++|||| +|+.+.++.+++++|| +| |++++ .++.++.+|+++|+++|++|| ..|+.++..+|.+
T Consensus 20 ~~~~~~~I~G-~~~~~~~~~~~~v~nP--------~t~g~~i~-~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~ 89 (528)
T 3u4j_A 20 KSRYQMLVDG-KSVDAASGSTIDRVSP--------GHAGEVVG-TWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSR 89 (528)
T ss_dssp CCBCCEEETT-EEECCTTCCEEEEECT--------TSTTCEEE-EEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHH
T ss_pred ccccceeECC-EEecCCCCCEEEEeCC--------CCCCcEEE-EEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHH
Confidence 4466899999 9999988866666666 99 99998 777999999999999999999 7899999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEE
Q 014211 94 QIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV 173 (429)
Q Consensus 94 ~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 173 (429)
+|++++++|+++.++|++++++|+|||+.++ ..|+..+++.++|+++.++++.+... +. ...+...++.++|+|||
T Consensus 90 ~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~~P~GVV 165 (528)
T 3u4j_A 90 LMFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEGQTH-NN--IGDDRLGLVLREPVGVV 165 (528)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEE-CC--SCTTEEEEEEEEECCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeee-cc--CCCCceeEEEeccceEE
Confidence 9999999999999999999999999999999 47999999999999999988764332 11 11345678999999999
Q ss_pred EEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEE
Q 014211 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKIL 250 (429)
Q Consensus 174 ~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ 250 (429)
++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|++|+ ||.|.
T Consensus 166 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~ 245 (528)
T 3u4j_A 166 GIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVA 245 (528)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEE
T ss_pred EEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEE
Confidence 9999999999999999999999999999999999999999999999999 99999999999 667899999997 99999
Q ss_pred EeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHH
Q 014211 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (429)
Q Consensus 251 ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 330 (429)
||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|++|+++|
T Consensus 246 FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l 324 (528)
T 3u4j_A 246 FTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALMERL 324 (528)
T ss_dssp EESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHh-hcCCCCCcCCCEEEEechHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC--CCceEecEEEecCCCCCCccccCcc
Q 014211 331 RNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE--KQLKIAPTILLDVPDDSTIMKEEIF 406 (429)
Q Consensus 331 ~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~f 406 (429)
+++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||..+. .|+|++|||+.+++++|++++||+|
T Consensus 325 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 404 (528)
T 3u4j_A 325 LDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIF 404 (528)
T ss_dssp HHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCC
T ss_pred HHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceee
Confidence 9999999999996 5899999999999999999999986 5779999997643 7999999999999999999999999
Q ss_pred ccceeeEecCCHHHHHHHHHhh
Q 014211 407 GPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 407 gPv~~v~~~~~~~eai~l~n~~ 428 (429)
|||++|++|+|.+|||+++|++
T Consensus 405 GPVl~v~~~~~~deAi~~aN~~ 426 (528)
T 3u4j_A 405 GPVLSTLTFKTADEAVALANAT 426 (528)
T ss_dssp SSEEEEEEESSHHHHHHHHHCS
T ss_pred ccEEEEEEeCCHHHHHHHHhcC
Confidence 9999999999999999999975
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-83 Score=654.03 Aligned_cols=396 Identities=20% Similarity=0.247 Sum_probs=366.4
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 014211 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 97 (429)
...++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|++
T Consensus 25 ~~~~~~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~ 94 (521)
T 4e4g_A 25 YELGHFIDG-KRVAGTSGRVSNIFNP--------ATGEVQG-TVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMK 94 (521)
T ss_dssp EEECEEETT-EEECCSSSCEEEEEET--------TTTEEEE-EEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred hccCeeECC-EEecCCCCCEEEEECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 456899999 9999988766666555 9999998 67799999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEc
Q 014211 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 177 (429)
++++|++++++|++++++|+|||..+++ .|+..+++.++|+++..+...+ .... ....+...++.++|+|||++|+
T Consensus 95 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~-~~~~--~~~~~~~~~~~~~P~GVV~~I~ 170 (521)
T 4e4g_A 95 FVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKS-EFTE--GAGPGIDMYSIRQPVGIGAGIT 170 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHTCE-EEEE--EEETTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-cccc--cCCCCcceeEEEcCCcEEEEEC
Confidence 9999999999999999999999999996 6999999999999986654332 2211 1123446789999999999999
Q ss_pred CCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCCh
Q 014211 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 178 p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~ 255 (429)
|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+++|+.+.+..|++|+ +|.|.||||+
T Consensus 171 PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~ 250 (521)
T 4e4g_A 171 PFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGST 250 (521)
T ss_dssp CSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCH
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCH
Confidence 999999999999999999999999999999999999999999999 99999999999888889999997 9999999999
Q ss_pred HHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCC-chHHHHHHHHHHH
Q 014211 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD-FAPKLIDSLRNEL 334 (429)
Q Consensus 256 ~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~~ 334 (429)
.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|+|||++ +|++|+++|++++
T Consensus 251 ~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~ 329 (521)
T 4e4g_A 251 PIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGY-GSAGERCMAISVAVPVGEETANRLIDKLVPMV 329 (521)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHH-hCCCCCcccCeEEEEeCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 999999999999999999 9999999999999
Q ss_pred hhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-----CCCCceEecEEEecCCCCCCccccCccc
Q 014211 335 KEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-----DEKQLKIAPTILLDVPDDSTIMKEEIFG 407 (429)
Q Consensus 335 ~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-----~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 407 (429)
+++++|+|. +++++||++++.+++++.++|+++. .|+++++||.. +..|+|++|||+.+++++|++++||+||
T Consensus 330 ~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG 409 (521)
T 4e4g_A 330 ESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFG 409 (521)
T ss_dssp HTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCS
T ss_pred HhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccC
Confidence 999999996 6889999999999999999999986 57899999964 2468999999999999999999999999
Q ss_pred cceeeEecCCHHHHHHHHHhh
Q 014211 408 PLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 408 Pv~~v~~~~~~~eai~l~n~~ 428 (429)
||++|++|+|++|||+++|++
T Consensus 410 PVl~v~~~~~~deAi~~aN~~ 430 (521)
T 4e4g_A 410 PVLSVVRARNYEEALSLPMKH 430 (521)
T ss_dssp SEEEECCBSSHHHHHHHHHHS
T ss_pred cEEEEEEeCCHHHHHHHHhcC
Confidence 999999999999999999975
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-83 Score=651.85 Aligned_cols=394 Identities=24% Similarity=0.360 Sum_probs=365.9
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMSQIQ 96 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~---~w~~~~~~~R~~~L~ 96 (429)
.++|||| +|+.+.++.+++++| |+||++++ .++.++.+|+++|+++|++||+ .|+.+++.+|.++|+
T Consensus 20 ~~~~i~G-~~~~~~~~~~~~v~n--------P~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~ 89 (500)
T 1o04_A 20 NQIFINN-EWHDAVSRKTFPTVN--------PSTGEVIC-QVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLN 89 (500)
T ss_dssp CSEEETT-EEECCTTCCEEEEEE--------TTTTEEEE-EEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHH
T ss_pred cCeeECC-EEecCCCCCeEEEEC--------CCCCCEEE-EEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHH
Confidence 3689999 999987765555555 59999998 7779999999999999999999 899999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEE
Q 014211 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 97 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 176 (429)
+++++|++++++|++++++|+|||+.++...|+..+++.++|+++.++++.+.... . ..+...++.++|+|||++|
T Consensus 90 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~-~---~~~~~~~~~~~P~GVv~~I 165 (500)
T 1o04_A 90 RLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIP-I---DGDFFSYTRHEPVGVCGQI 165 (500)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEEC-C---SSSEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCccee-c---CCCceEEEEEecCCcEEEE
Confidence 99999999999999999999999999876679999999999999999887664321 1 1234568899999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeC
Q 014211 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftG 253 (429)
+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.+..|++|+ +|.|.|||
T Consensus 166 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTG 245 (500)
T 1o04_A 166 IPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG 245 (500)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEES
T ss_pred CCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999999 667899999997 99999999
Q ss_pred ChHHHHHHHHHHh-cccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHH
Q 014211 254 SPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (429)
Q Consensus 254 s~~~~~~i~~~~~-~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~ 332 (429)
|+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|++
T Consensus 246 S~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~ 324 (500)
T 1o04_A 246 STEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVA 324 (500)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-ccCCCCCCCCCEEEEehhHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccc
Q 014211 333 ELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 333 ~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (429)
+++++++|+|. +++++||++++.+++++.++|+++. .|+++++||..+ ..|+|++|||+.+++++|++++||+||||
T Consensus 325 ~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 404 (500)
T 1o04_A 325 RAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPV 404 (500)
T ss_dssp HHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSE
T ss_pred HHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceE
Confidence 99999999996 5899999999999999999999986 577999999764 36899999999999999999999999999
Q ss_pred eeeEecCCHHHHHHHHHhh
Q 014211 410 LPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~~~eai~l~n~~ 428 (429)
++|++|+|+||||+++|++
T Consensus 405 l~v~~~~~~deAi~~aN~~ 423 (500)
T 1o04_A 405 MQILKFKTIEEVVGRANNS 423 (500)
T ss_dssp EEEEEECCHHHHHHHHHCS
T ss_pred EEEEeeCCHHHHHHHHhcC
Confidence 9999999999999999975
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-83 Score=652.66 Aligned_cols=397 Identities=22% Similarity=0.313 Sum_probs=368.6
Q ss_pred ccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 014211 17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ 96 (429)
Q Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~ 96 (429)
.+..++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|+
T Consensus 10 ~~~~~~~I~G-~~~~~~~~~~~~~~nP--------~tg~~i~-~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~ 79 (497)
T 3k2w_A 10 FKNKVNFIGG-QYVPSNESDTIDILSP--------STGKVIG-EIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLR 79 (497)
T ss_dssp CCTTCEEETT-EEECCSSCCEEEEECS--------SSCSEEE-EEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred ccccceeECC-EEecCCCCCEEEEECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence 4556899999 9999988866666666 8999998 6779999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEE
Q 014211 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 97 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 176 (429)
++++.|+++.++|++++++|+|||+.+++ .|+..+++.++|++..++++.+..... ...+...++.++|+|||++|
T Consensus 80 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVV~~I 155 (497)
T 3k2w_A 80 TFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPS---DNQDEKIYIHKVPRGVVVGI 155 (497)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEEC---SSTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccc---CCCCcceeEEEcCCceEEEE
Confidence 99999999999999999999999999997 699999999999999998876543211 12355678999999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeC
Q 014211 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftG 253 (429)
+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|++|+ +|.|.|||
T Consensus 156 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTG 235 (497)
T 3k2w_A 156 TAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTG 235 (497)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEES
T ss_pred CCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999999 567899999997 99999999
Q ss_pred ChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014211 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 254 s~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
|+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||+++|++|+++|+++
T Consensus 236 S~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 314 (497)
T 3k2w_A 236 STVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPL 314 (497)
T ss_dssp CHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEETTTHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-hCCCCCCcCCcEEEEeHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc---CC--CCceEecEEEecCCCCCCccccCcc
Q 014211 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR---DE--KQLKIAPTILLDVPDDSTIMKEEIF 406 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~---~~--~g~~~~Ptvl~~~~~~~~~~~~E~f 406 (429)
++++++|+|. +++++||++++.+++++.++|+++. .|+++++||.. +. .|+|++|||+.+++++|++++||+|
T Consensus 315 ~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiF 394 (497)
T 3k2w_A 315 VKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETF 394 (497)
T ss_dssp HHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCC
T ss_pred HHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCcc
Confidence 9999999996 5889999999999999999999986 47899999972 22 6899999999999999999999999
Q ss_pred ccceeeEecCCHHHHHHHHHhh
Q 014211 407 GPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 407 gPv~~v~~~~~~~eai~l~n~~ 428 (429)
|||++|++|+|+||||+++|++
T Consensus 395 GPVl~v~~~~~~deAi~~aN~~ 416 (497)
T 3k2w_A 395 GPILPIVKVSSMEQAIEFCNDS 416 (497)
T ss_dssp SSEEEEEEESCHHHHHHHHTCS
T ss_pred CcEEEEEEeCCHHHHHHHHhcC
Confidence 9999999999999999999975
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-83 Score=650.16 Aligned_cols=395 Identities=24% Similarity=0.346 Sum_probs=366.9
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHH
Q 014211 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQ 96 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~ 96 (429)
..++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+ .|+.+++.+|.++|+
T Consensus 8 ~~~~~i~G-~~~~~~~~~~~~~~nP--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~ 77 (495)
T 3b4w_A 8 YDKLFIGG-KWTKPSTSDVIEVRCP--------ATGEYVG-KVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIA 77 (495)
T ss_dssp CSSEEETT-EEECCSSCCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHH
T ss_pred ccceeECC-EEecCCCCCeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHH
Confidence 33689999 9999877755555555 9999998 7779999999999999999999 999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEE
Q 014211 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 97 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 176 (429)
+++++|++++++|++++++|+|||+.+++..|+..+++.++|+++.++++.+... +. ..+...++.++|+|||++|
T Consensus 78 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~-~~---~~~~~~~~~~~P~GVv~~I 153 (495)
T 3b4w_A 78 AAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTET-RT---GSYGQSIVSREPVGVVGAI 153 (495)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEE-EE---ETTEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cC---CCCceEEEEEccCceEEEE
Confidence 9999999999999999999999999999646999999999999999988776432 11 1233568999999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCC
Q 014211 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGS 254 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs 254 (429)
+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+|+.+.++.|++|+ +|.|.||||
T Consensus 154 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS 233 (495)
T 3b4w_A 154 VAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGS 233 (495)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESC
T ss_pred CCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCC
Confidence 9999999999999999999999999999999999999999999999 99999999999777899999996 999999999
Q ss_pred hHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHH
Q 014211 255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334 (429)
Q Consensus 255 ~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~ 334 (429)
+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||+++|++|+++|++++
T Consensus 234 ~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 312 (495)
T 3b4w_A 234 SAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFV 312 (495)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHh-hcCCCCCCCCeEEEEcccHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred hhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC---CCceEecEEEecCCCCCCccccCccccc
Q 014211 335 KEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 335 ~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (429)
+++++|+|. +++++||++++.+++++.++++++. .|+++++||..+. .|+|++|||+.+++++|++++||+||||
T Consensus 313 ~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 392 (495)
T 3b4w_A 313 TALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPV 392 (495)
T ss_dssp HHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred HhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccce
Confidence 999999996 5899999999999999999999986 4779999997643 5899999999999999999999999999
Q ss_pred eeeEecCCHHHHHHHHHhh
Q 014211 410 LPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~~~eai~l~n~~ 428 (429)
++|++|+|+||||+++|++
T Consensus 393 l~v~~~~~~deAi~~aN~~ 411 (495)
T 3b4w_A 393 LAIIPYDTEEDAIAIANDS 411 (495)
T ss_dssp EEEEEESSHHHHHHHHHCS
T ss_pred EEEEecCCHHHHHHHHhcC
Confidence 9999999999999999975
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-83 Score=653.94 Aligned_cols=395 Identities=24% Similarity=0.318 Sum_probs=366.3
Q ss_pred cccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHH
Q 014211 16 AACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQI 95 (429)
Q Consensus 16 ~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L 95 (429)
+....++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|
T Consensus 11 ~~~~~~~~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L 80 (517)
T 3r31_A 11 AQPKASHFIDG-DYVEDNTGTPFESIFP--------ATGEMIA-KLHAATPAIVERAIASAKRAQKEWAAMSPMARGRIL 80 (517)
T ss_dssp TCCSSSEEETT-EEECCTTSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred cccccCeeECC-EEecCCCCCEEEEECC--------CCCCEEE-EECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHH
Confidence 44567899999 9999888866666666 9999998 777999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHh---hcCCCcccccccCCCCcceEEeecceE
Q 014211 96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIISEPLGV 172 (429)
Q Consensus 96 ~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~Gv 172 (429)
++++++|+++.++|++++++|+|||+.++ |+..+++.++|++...++ |........ ..+. .++.++|+||
T Consensus 81 ~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~---~~~~-~~~~~~P~GV 153 (517)
T 3r31_A 81 KRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPL---GGDF-AYTKRVPLGV 153 (517)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC---SSSE-EEEEEEECSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCccccc---CCCc-ceEEEcCccE
Confidence 99999999999999999999999999987 999999999999998877 333332221 1234 8999999999
Q ss_pred EEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEE
Q 014211 173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKIL 250 (429)
Q Consensus 173 v~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ 250 (429)
|++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+|+.+.++.|++|+ ||.|.
T Consensus 154 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~ 233 (517)
T 3r31_A 154 CVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVS 233 (517)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEE
T ss_pred EEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEe
Confidence 99999999999999999999999999999999999999999999999999 99999999999778899999997 99999
Q ss_pred EeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHH
Q 014211 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (429)
Q Consensus 251 ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 330 (429)
||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|++|+++|
T Consensus 234 FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l 312 (517)
T 3r31_A 234 LTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENL 312 (517)
T ss_dssp EESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEGGGHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHh-cCCCceeccCceEEEeHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCc-cC---CCCceEecEEEecCCCCCCccccC
Q 014211 331 RNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQ-RD---EKQLKIAPTILLDVPDDSTIMKEE 404 (429)
Q Consensus 331 ~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~-~~---~~g~~~~Ptvl~~~~~~~~~~~~E 404 (429)
+++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||. .+ ..|+|++|||+.+++++|++++||
T Consensus 313 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE 392 (517)
T 3r31_A 313 KRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREE 392 (517)
T ss_dssp HHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSC
T ss_pred HHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccce
Confidence 9999999999996 5889999999999999999999986 4789999993 11 368999999999999999999999
Q ss_pred ccccceeeEecCCHHHHHHHHHhh
Q 014211 405 IFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 405 ~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+||||++|++|+|.||||+++|++
T Consensus 393 iFGPVl~v~~~~~~deAi~~aN~~ 416 (517)
T 3r31_A 393 IFGPVMCVLDFDDEDEVLARANAT 416 (517)
T ss_dssp CSSSEEEEEEECCHHHHHHHHHCS
T ss_pred eeccEEEEEEeCCHHHHHHHHhCC
Confidence 999999999999999999999975
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-83 Score=648.25 Aligned_cols=394 Identities=23% Similarity=0.343 Sum_probs=364.5
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA 99 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a 99 (429)
.++|||| +|+.+.+ .+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|++++
T Consensus 24 ~~~~i~G-~~~~~~~-~~~~v~nP--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 92 (495)
T 1wnd_A 24 HKLLING-ELVSGEG-EKQPVYNP--------ATGDVLL-EIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLA 92 (495)
T ss_dssp CCEEETT-EEECCCS-CEEEEEET--------TTTEEEE-EEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred cCeEECC-EEecCCC-CeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Confidence 4689999 9998755 45555555 9999998 7779999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCC
Q 014211 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (429)
Q Consensus 100 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~ 179 (429)
++|++++++|++++++|+|||..+++..|+..+++.++|+++.++++.+... +.. ..+...++.++|+|||++|+||
T Consensus 93 ~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~-~~~--~~~~~~~~~~~P~GVV~~I~Pw 169 (495)
T 1wnd_A 93 DVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAA-GEY--LEGHTSMIRRDPLGVVASIAPW 169 (495)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECB-EEE--ETTEEEEEEEEECSEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-cCC--CCCceeEEeeecCCeEEEECCC
Confidence 9999999999999999999999999634999999999999999888754332 111 1233568899999999999999
Q ss_pred chhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHH
Q 014211 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRV 257 (429)
Q Consensus 180 n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~ 257 (429)
|||+...++++++||++||+||+|||+.+|+++.++++++.+++|+|++|+|+| +.+.+..|++|+ +|.|.||||+.+
T Consensus 170 N~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~ 249 (495)
T 1wnd_A 170 NYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIAT 249 (495)
T ss_dssp SSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHH
T ss_pred cchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHH
Confidence 999999999999999999999999999999999999999999999999999999 667899999997 999999999999
Q ss_pred HHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhh
Q 014211 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337 (429)
Q Consensus 258 ~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 337 (429)
|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++
T Consensus 250 G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 328 (495)
T 1wnd_A 250 GEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATL 328 (495)
T ss_dssp HHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hCCCCC-CCCcccccCCHHHHHHHHhHHHhhhc-C-CEEEeCCc-cCCCCceEecEEEecCCCCCCccccCccccceeeE
Q 014211 338 FGKNPM-ESKDLSRIVNPFHFARLASLLDEDKV-S-DKIVYGGQ-RDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413 (429)
Q Consensus 338 ~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~-~~vl~gg~-~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~ 413 (429)
++|+|. +++++||++++.+++++.++|+++.. | +++++||. .+..|+|++|||+.+++++|++++||+||||++|+
T Consensus 329 ~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 408 (495)
T 1wnd_A 329 KSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVT 408 (495)
T ss_dssp CBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEE
T ss_pred cCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEE
Confidence 999996 58999999999999999999999864 6 79999997 54469999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHhh
Q 014211 414 TVSIVSSAHFKLKAC 428 (429)
Q Consensus 414 ~~~~~~eai~l~n~~ 428 (429)
+|+|++|||+++|++
T Consensus 409 ~~~~~deAi~~aN~~ 423 (495)
T 1wnd_A 409 PFDNEEQVVNWANDS 423 (495)
T ss_dssp EECCHHHHHHHHHSS
T ss_pred EeCCHHHHHHHHhcC
Confidence 999999999999975
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-83 Score=648.49 Aligned_cols=394 Identities=24% Similarity=0.370 Sum_probs=365.2
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 014211 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 97 (429)
...++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|++
T Consensus 10 ~~~~~~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 79 (505)
T 3prl_A 10 FNANILRNG-EWVESRTGERISISAP--------ASGVALG-SIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYA 79 (505)
T ss_dssp EECCEEETT-EEECCTTCCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred cccCeeECC-EEecCCCCCEEEEECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 345899999 9999988766666666 9999998 77799999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCC---CCcceEEeecceEEE
Q 014211 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTY---PSSAEIISEPLGVVL 174 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~Gvv~ 174 (429)
++++|+++.++|++++++|+|||..+++ .|+..+++.++|+++..+++.+....... ... +...++.++|+|||+
T Consensus 80 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~P~GVV~ 157 (505)
T 3prl_A 80 WADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGETLKGDQ-FKGGSSKKIALVEREPLGVVL 157 (505)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCCEEEEEGGG-STTTCSSEEEEEEEEECSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccc-cccccCCceeEEEEcCCcEEE
Confidence 9999999999999999999999999997 69999999999999999887654321110 011 345688999999999
Q ss_pred EEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEE
Q 014211 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILY 251 (429)
Q Consensus 175 ~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~f 251 (429)
+|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+| +.+.++.|++|+ +|.|.|
T Consensus 158 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~F 237 (505)
T 3prl_A 158 AISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITF 237 (505)
T ss_dssp EEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEE
T ss_pred EECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999999 467889999997 999999
Q ss_pred eCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHH
Q 014211 252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR 331 (429)
Q Consensus 252 tGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 331 (429)
|||+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|++|+++|+
T Consensus 238 TGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 314 (505)
T 3prl_A 238 TGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIK 314 (505)
T ss_dssp ESCHHHHHHHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHH-hcCCCccccCceEEEeHHHHHHHHHHHH
Confidence 999999999999887 8999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccce
Q 014211 332 NELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLL 410 (429)
Q Consensus 332 ~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~ 410 (429)
++++++++|+|.+++++||++++.+++++.++|+++. .|+++++||.. .|+|++|||+.+++++|++++||+||||+
T Consensus 315 ~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 392 (505)
T 3prl_A 315 ELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVL 392 (505)
T ss_dssp HHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEE
T ss_pred HHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEE
Confidence 9999999999987889999999999999999999986 47799999974 68999999999999999999999999999
Q ss_pred eeEecCCHHHHHHHHHhh
Q 014211 411 PIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 411 ~v~~~~~~~eai~l~n~~ 428 (429)
+|++|+|+||||+++|++
T Consensus 393 ~V~~~~~~deAi~~aN~~ 410 (505)
T 3prl_A 393 PIIRVKDANEAISLSNQS 410 (505)
T ss_dssp EEEEESSHHHHHHHHHTS
T ss_pred EEEEeCCHHHHHHHHhCC
Confidence 999999999999999975
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-83 Score=650.44 Aligned_cols=396 Identities=22% Similarity=0.323 Sum_probs=365.9
Q ss_pred ccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 014211 17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ 96 (429)
Q Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~ 96 (429)
....++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|+
T Consensus 24 ~~~~~~~i~G-~~~~~~~~~~~~~~nP--------~tg~~i~-~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~ 93 (515)
T 2d4e_A 24 ERPALHFIAG-EFVPSESGETFPSLDP--------ATNEVLG-VAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLL 93 (515)
T ss_dssp HSCBCEEETT-EEECCTTCCEEEEEET--------TTTEEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred ccccCeeECC-EEecCCCCCeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence 3345799999 9999877755555555 9999998 6779999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEE
Q 014211 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 97 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 176 (429)
+++++|+++.++|++++++|+|||+.+++ .|+..+++.++|+++.++++.+... +.. ..+...++.++|+|||++|
T Consensus 94 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~-~~~--~~~~~~~~~~~P~GVv~~I 169 (515)
T 2d4e_A 94 RIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRT-FPV--DRDWLYYTVRVPAGPVGII 169 (515)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEE-CCB--TTTEEEEEEEEECCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-ccC--CCCceeEEEEecCCceEEE
Confidence 99999999999999999999999999997 7999999999999999888765322 111 1244568899999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeC
Q 014211 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftG 253 (429)
+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+|+| +.+.++.|++|+ +|.|.|||
T Consensus 170 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTG 249 (515)
T 2d4e_A 170 TPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTG 249 (515)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEES
T ss_pred CCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeC
Confidence 9999999999999999999999999999999999999999999999 99999999999 457899999996 99999999
Q ss_pred ChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014211 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 254 s~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
|+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||+++|++|+++|+++
T Consensus 250 S~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 328 (515)
T 2d4e_A 250 ETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIF-SFNGERCTASSRLLVEEKIFEDFVGKVVER 328 (515)
T ss_dssp CHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEEHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEehhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC---------CCceEecEEEecCCCCCCccc
Q 014211 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE---------KQLKIAPTILLDVPDDSTIMK 402 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~---------~g~~~~Ptvl~~~~~~~~~~~ 402 (429)
++++++|+|. +++++||++++.+++++.++|+++. .|+++++||..+. .|+|++|||+.+ +++|.+++
T Consensus 329 ~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~ 407 (515)
T 2d4e_A 329 ARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQ 407 (515)
T ss_dssp HHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHH
T ss_pred HhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhh
Confidence 9999999996 5799999999999999999999885 5789999997643 689999999999 99999999
Q ss_pred cCccccceeeEecCCHHHHHHHHHhh
Q 014211 403 EEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 403 ~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
||+||||++|++|+|++|||+++|++
T Consensus 408 eEiFGPVl~v~~~~~~deAi~~aN~~ 433 (515)
T 2d4e_A 408 EEIFGPVLVAIPFKDEEEALRKANDT 433 (515)
T ss_dssp SCCCSSEEEEEEESSHHHHHHHHHCS
T ss_pred ccccCCceEEEeeCCHHHHHHHHhcC
Confidence 99999999999999999999999975
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-83 Score=649.84 Aligned_cols=401 Identities=19% Similarity=0.297 Sum_probs=367.1
Q ss_pred hhcccccccceeeecceeeccCCccccccccCCceEeeeCC-cchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHH
Q 014211 12 FSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSA-TMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEW 90 (429)
Q Consensus 12 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~-tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~ 90 (429)
+...+....++|||| +|+.+ +.+ +.+.||+ ||++++ .++.++.+|+++|+++|++||+.|+.+++.+
T Consensus 30 ~~~~~~~~~~~~i~G-~~~~~--~~~--------~~~~nP~~t~~~i~-~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~ 97 (516)
T 1uzb_A 30 VREEFGRHYPLYIGG-EWVDT--KER--------MVSLNPSAPSEVVG-TTAKAGKAEAEAALEAAWKAFKTWKDWPQED 97 (516)
T ss_dssp HHHTTTEEECEEETT-EEECC--SSE--------EEEEETTEEEEEEE-EEECCCHHHHHHHHHHHHHHHHHHTTSCHHH
T ss_pred hhhhhccccceeECC-EEecC--CCe--------EEEECCCCCCcEEE-EEeCCCHHHHHHHHHHHHHHHHHhccCCHHH
Confidence 333344456899999 99964 434 4455558 699888 6779999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecc
Q 014211 91 RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPL 170 (429)
Q Consensus 91 R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 170 (429)
|.++|++++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++.++++.+...... ...+...++.++|+
T Consensus 98 R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~P~ 174 (516)
T 1uzb_A 98 RSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVV--PYPGEDNESFYVPL 174 (516)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCC--CCTTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccc--CCCCceEEEEEecc
Confidence 99999999999999999999999999999999997 7999999999999999999876542111 11234568899999
Q ss_pred eEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CC
Q 014211 171 GVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WD 247 (429)
Q Consensus 171 Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~ 247 (429)
|||++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+| +.+.+..|++|+ +|
T Consensus 175 GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~ 254 (516)
T 1uzb_A 175 GAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIR 254 (516)
T ss_dssp CEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCC
T ss_pred ceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcC
Confidence 9999999999999999999999999999999999999999999999999999 99999999999 667899999997 99
Q ss_pred EEEEeCChHHHHHHHHHHh------cccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCC
Q 014211 248 KILYTGSPRVGRIVMAAAA------KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321 (429)
Q Consensus 248 ~v~ftGs~~~~~~i~~~~~------~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~ 321 (429)
.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||++
T Consensus 255 ~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~ 333 (516)
T 1uzb_A 255 FINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQG 333 (516)
T ss_dssp EEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHH
T ss_pred EEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEchH
Confidence 9999999999999999998 789999999999999999999999999999999999 999999999999999999
Q ss_pred chHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCcc-CCCCceEecEEEecCCCCCCc
Q 014211 322 FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTI 400 (429)
Q Consensus 322 ~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~ 400 (429)
+|++|+++|+++++++++|+|++++++||++++.+++++.++|+++...+++++||.. +..|+|++|||+.+++++|++
T Consensus 334 i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i 413 (516)
T 1uzb_A 334 AYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARI 413 (516)
T ss_dssp HHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGG
T ss_pred HHHHHHHHHHHHHHhccCCCCccccccCCCCCHHHHHHHHHHHHHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHh
Confidence 9999999999999999999996689999999999999999999998765689999976 346899999999999999999
Q ss_pred cccCccccceeeEecCCHHHHHHHHHhh
Q 014211 401 MKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 401 ~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++||+||||++|++|+|++|||+++|++
T Consensus 414 ~~eEiFGPVl~v~~~~~~~eAi~~aN~~ 441 (516)
T 1uzb_A 414 AQEEIFGPVLSVIRVKDFAEALEVANDT 441 (516)
T ss_dssp GTSCCCSSEEEEEEESSHHHHHHHHHCS
T ss_pred hhccccCceEEEEEeCCHHHHHHHHhcC
Confidence 9999999999999999999999999975
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-83 Score=645.13 Aligned_cols=397 Identities=23% Similarity=0.344 Sum_probs=367.2
Q ss_pred ccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 014211 17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ 96 (429)
Q Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~ 96 (429)
+...++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|+
T Consensus 4 ~~~~~~~i~g-~~~~~~~~~~~~v~~P--------~tg~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~ 73 (479)
T 2imp_A 4 PVQHPMYIDG-QFVTWRGDAWIDVVNP--------ATEAVIS-RIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLR 73 (479)
T ss_dssp CEECCEEETT-EEECCCCSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CcccceeECC-EEecCCCCCeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 4556799999 9999877755555555 9999998 6779999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEE
Q 014211 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 97 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 176 (429)
+++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++.++++.+.... . ...+...++.++|+|||++|
T Consensus 74 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~-~--~~~~~~~~~~~~P~GVv~~I 149 (479)
T 2imp_A 74 KISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQ-S--DRPGENILLFKRALGVTTGI 149 (479)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEEC-C--SSTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccc-c--CCCCceeEEEEeccceEEEE
Confidence 99999999999999999999999999996 79999999999999988877654421 1 11234568999999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeC
Q 014211 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftG 253 (429)
+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+ .+.++.|++|+ +|.|.|||
T Consensus 150 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTG 229 (479)
T 2imp_A 150 LPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTG 229 (479)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEES
T ss_pred CCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeC
Confidence 9999999999999999999999999999999999999999999999 999999999994 46789999996 99999999
Q ss_pred ChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014211 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 254 s~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
|+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++
T Consensus 230 S~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 308 (479)
T 2imp_A 230 SVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEA 308 (479)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSS-TTTTCCSSSCSEEEEEGGGHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCcCCcEEEEehhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC--CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCccccc
Q 014211 334 LKEFFGKNPM--ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 334 ~~~~~~g~~~--~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (429)
++++++|+|. +++++||++++.+++++.++++++. .|+++++||.. +..|+|++|||+.+++++|++++||+||||
T Consensus 309 ~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPV 388 (479)
T 2imp_A 309 MQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPV 388 (479)
T ss_dssp HHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSE
T ss_pred HHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCce
Confidence 9999999996 4899999999999999999999986 47799999975 336899999999999999999999999999
Q ss_pred eeeEecCCHHHHHHHHHhh
Q 014211 410 LPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~~~eai~l~n~~ 428 (429)
++|++|+|++|||+++|++
T Consensus 389 l~v~~~~~~~eAi~~aN~~ 407 (479)
T 2imp_A 389 LPVVAFDTLEDAISMANDS 407 (479)
T ss_dssp EEEEEESSHHHHHHHHHCS
T ss_pred EEEEeeCCHHHHHHHHhcC
Confidence 9999999999999999975
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-82 Score=642.97 Aligned_cols=395 Identities=22% Similarity=0.332 Sum_probs=366.9
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 014211 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 98 (429)
..++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|+++
T Consensus 9 ~~~~~i~g-~~~~~~~~~~~~~~~P--------~t~~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 78 (481)
T 3jz4_A 9 RQQALING-EWLDANNGEAIDVTNP--------ANGDKLG-SVPKMGADETRAAIDAANRALPAWRALTAKERATILRNW 78 (481)
T ss_dssp CCSEEETT-EEECCTTCCEEEEECT--------TTCCEEE-EEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred ccceeECC-EEecCCCCCeEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHH
Confidence 45799999 9999988866666666 9999988 677999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcC
Q 014211 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 178 (429)
++.|+++.++|++++++|+|||..+++ .|+..+++.++|++....+..+.... ....+...++.++|+|||++|+|
T Consensus 79 a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~P~GVv~~I~P 154 (481)
T 3jz4_A 79 FNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIP---GHQADKRLIVIKQPIGVTAAITP 154 (481)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEC---CSSTTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccc---ccCCCceEEEEEcCccEEEEECC
Confidence 999999999999999999999999996 69999999999999987764432211 11234567899999999999999
Q ss_pred CchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCCh
Q 014211 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 179 ~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~ 255 (429)
||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+++| +.+.++.|++|+ +|.|.||||+
T Consensus 155 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~ 234 (481)
T 3jz4_A 155 WNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGST 234 (481)
T ss_dssp SSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 99999999999 577899999997 9999999999
Q ss_pred HHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHh
Q 014211 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (429)
Q Consensus 256 ~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~ 335 (429)
.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++++
T Consensus 235 ~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 313 (481)
T 3jz4_A 235 EIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMS 313 (481)
T ss_dssp HHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHH-HhCCCcccCCcEEEEeHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCccccceee
Q 014211 336 EFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (429)
Q Consensus 336 ~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v 412 (429)
++++|+|. +++++||++++.+++++.++|+++. .|+++++||.. +..|+|++|||+.+++++|.+++||+||||++|
T Consensus 314 ~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v 393 (481)
T 3jz4_A 314 KLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPL 393 (481)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEE
T ss_pred hccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEE
Confidence 99999996 5889999999999999999999986 57899999976 446899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHhh
Q 014211 413 VTVSIVSSAHFKLKAC 428 (429)
Q Consensus 413 ~~~~~~~eai~l~n~~ 428 (429)
++|+|+||||+++|++
T Consensus 394 ~~~~~~deAi~~aN~~ 409 (481)
T 3jz4_A 394 FRFKDEADVIAQANDT 409 (481)
T ss_dssp EEECCHHHHHHHHHCS
T ss_pred EEECCHHHHHHHHhcC
Confidence 9999999999999975
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-81 Score=638.51 Aligned_cols=402 Identities=16% Similarity=0.226 Sum_probs=365.6
Q ss_pred hhhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCC
Q 014211 8 AFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKS 87 (429)
Q Consensus 8 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~ 87 (429)
.|+++. ..+++++|||| +|+. ++.++ .+.||+||++++ .++.++.+|+++|+++|++||+.|+.++
T Consensus 14 ~~~~~~--~~~~~~~~i~g-~~~~--~~~~~--------~v~nP~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~ 79 (500)
T 2j6l_A 14 WLKELG--LREENEGVYNG-SWGG--RGEVI--------TTYCPANNEPIA-RVRQASVADYEETVKKAREAWKIWADIP 79 (500)
T ss_dssp GGGGGT--CCSEEECEESS-SEEC--CSCEE--------EEEETTTTEEEE-EEECCCHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHhcC--CCCCCCceECC-EEec--CCCeE--------EEECCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 344443 67889999999 9994 45444 455559999998 7779999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEe
Q 014211 88 YEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIIS 167 (429)
Q Consensus 88 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (429)
+.+|.++|++++++|++++++|++++++|+|||..++. +|+..+++.++|+++.++++.+.... ....+...++.+
T Consensus 80 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~---~~~~~~~~~~~~ 155 (500)
T 2j6l_A 80 APKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILP---SERSGHALIEQW 155 (500)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEEC---CSSTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccc---ccCCCceeEEEE
Confidence 99999999999999999999999999999999999995 79999999999999988776543211 111233457889
Q ss_pred ecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhh----h-cCCCceEEecCCHHHHHHHH
Q 014211 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED----Y-VDNSAVRVVEGAVAETSALL 242 (429)
Q Consensus 168 ~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~----a-lP~~~v~~v~~~~~~~~~L~ 242 (429)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.+ + +|+|++|+|+|+.+.++.|+
T Consensus 156 ~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~ 235 (500)
T 2j6l_A 156 NPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMA 235 (500)
T ss_dssp EECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHH
T ss_pred ecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999888765 4 99999999999777899999
Q ss_pred hcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCC
Q 014211 243 EQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321 (429)
Q Consensus 243 ~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~ 321 (429)
+|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||++
T Consensus 236 ~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~ 314 (500)
T 2j6l_A 236 KDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAV-GTAGQRCTTARRLFIHES 314 (500)
T ss_dssp HCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEETT
T ss_pred cCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCcCCCcEEEEcHH
Confidence 996 999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred chHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCC
Q 014211 322 FAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDS 398 (429)
Q Consensus 322 ~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~ 398 (429)
+|++|+++|++++++++.|+|. +++++||++++.+++++.++++++. .|+++++||.. +..|+|++|||+.+++++|
T Consensus 315 i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~ 394 (500)
T 2j6l_A 315 IHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDA 394 (500)
T ss_dssp THHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTC
T ss_pred HHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcC
Confidence 9999999999999999999996 5889999999999999999999986 47899999976 3468999999999999999
Q ss_pred CccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 399 TIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 399 ~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
.+++||+||||++|++|+|++|||+++|++
T Consensus 395 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 424 (500)
T 2j6l_A 395 SIAHTETFAPILYVFKFQNEEEVFAWNNEV 424 (500)
T ss_dssp HHHHSCCSSSEEEEEEECCHHHHHHHHHTS
T ss_pred hhhcCcccCceEEEEeeCCHHHHHHHHhCC
Confidence 999999999999999999999999999985
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-82 Score=641.05 Aligned_cols=399 Identities=23% Similarity=0.343 Sum_probs=366.6
Q ss_pred hhcccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHH
Q 014211 12 FSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWR 91 (429)
Q Consensus 12 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R 91 (429)
+++.+.. .++|||| +|+.+. .+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|
T Consensus 6 ~~~~~~~-~~~~i~g-~~~~~~--~~~~~~~P--------~tg~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R 72 (487)
T 2w8n_A 6 LSAALLR-TDSFVGG-RWLPAA--ATFPVQDP--------ASGAALG-MVADCGVREARAAVRAAYEAFCRWREVSAKER 72 (487)
T ss_dssp --CCCCC-CSEEETT-EEECCS--CEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHTTSCHHHH
T ss_pred cCccccc-cCeeECC-EEecCC--CeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHhccCCHHHH
Confidence 4556666 6899999 999874 45555555 8999998 77799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecce
Q 014211 92 MSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLG 171 (429)
Q Consensus 92 ~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~G 171 (429)
.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.++|+++.++++.+... .. ...+...++.++|+|
T Consensus 73 ~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~-~~--~~~~~~~~~~~~P~G 148 (487)
T 2w8n_A 73 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDII-HT--PAKDRRALVLKQPIG 148 (487)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCCEEE-CC--SCTTCEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-cc--CCCCceeEEEEecce
Confidence 9999999999999999999999999999999997 5999999999999999887544321 11 123456789999999
Q ss_pred EEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEec---C-CHHHHHHHHhcC-
Q 014211 172 VVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVE---G-AVAETSALLEQK- 245 (429)
Q Consensus 172 vv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~---~-~~~~~~~L~~~~- 245 (429)
||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++ +|+|+||+|+ | +.+.++.|++|+
T Consensus 149 Vv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~ 228 (487)
T 2w8n_A 149 VAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPL 228 (487)
T ss_dssp EEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTT
T ss_pred EEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999 9999999999 7 566889999997
Q ss_pred CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHH
Q 014211 246 WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPK 325 (429)
Q Consensus 246 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~ 325 (429)
+|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++
T Consensus 229 v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~ 307 (487)
T 2w8n_A 229 VSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKF-RNTGQTCVCSNQFLVQRGIHDA 307 (487)
T ss_dssp EEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHT-CCCSCCCSEEEEEEEEHHHHHH
T ss_pred cCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCccccCCEEEEcccHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHHhh-hhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhc-CCEEEeCCccCCCCc-eEecEEEecCCCCCCcc
Q 014211 326 LIDSLRNELKE-FFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQL-KIAPTILLDVPDDSTIM 401 (429)
Q Consensus 326 f~~~l~~~~~~-~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~vl~gg~~~~~g~-~~~Ptvl~~~~~~~~~~ 401 (429)
|+++|++++++ +++|+|. +++++||++++.+++++.++|+++.. |+++++||..+..|+ |++|||+.+++++|+++
T Consensus 308 f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~ 387 (487)
T 2w8n_A 308 FVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCT 387 (487)
T ss_dssp HHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTT
T ss_pred HHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhh
Confidence 99999999999 9999996 58999999999999999999999864 779999998755689 99999999999999999
Q ss_pred ccCccccceeeEecCCHHHHHHHHHhh
Q 014211 402 KEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 402 ~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+||+||||++|++|+|++|||+++|++
T Consensus 388 ~eEiFGPVl~v~~~~~~~eAi~~aN~~ 414 (487)
T 2w8n_A 388 HEETFGPLAPVIKFDTEEEAIAIANAA 414 (487)
T ss_dssp CTTCCSSEEEEEEESCHHHHHHHHTCT
T ss_pred hcccccceEEEEEeCCHHHHHHHHhCC
Confidence 999999999999999999999999975
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-82 Score=639.90 Aligned_cols=396 Identities=23% Similarity=0.366 Sum_probs=367.3
Q ss_pred cccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHH
Q 014211 14 TGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMS 93 (429)
Q Consensus 14 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~ 93 (429)
+.+....++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++++++|++||+.|+.++..+|.+
T Consensus 2 ~~m~~~~~~~i~G-~~~~~~~~~~~~~~~P--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~ 71 (478)
T 3ty7_A 2 NAMRDYTKQYING-EWVESNSNETIEVINP--------ATEEVIG-KVAKGNKADVDKAVEAADDVYLEFRHTSVKERQA 71 (478)
T ss_dssp -CCEECCEEEETT-EEEECSSSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred cchhhhhhheECC-EEecCCCCCeEEeECC--------CCCCEEE-EECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHH
Confidence 3455677999999 9999988866666666 9999998 6779999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEE
Q 014211 94 QIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV 173 (429)
Q Consensus 94 ~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 173 (429)
+|+++++.|+++.++|++++++|+|||+.+++..|+..+++.++++++.++++.+.. .+...++.++|+|||
T Consensus 72 ~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv 143 (478)
T 3ty7_A 72 LLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVS 143 (478)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCE
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc--------CCccceEEecCceEE
Confidence 999999999999999999999999999999955799999999999999998876533 124678899999999
Q ss_pred EEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEE
Q 014211 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKIL 250 (429)
Q Consensus 174 ~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ 250 (429)
++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+++| +.+.++.|+.|+ +|.|.
T Consensus 144 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~ 223 (478)
T 3ty7_A 144 GLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMS 223 (478)
T ss_dssp EEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEE
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEE
Confidence 9999999999999999999999999999999999999999999999999 99999999999 567899999997 99999
Q ss_pred EeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHH
Q 014211 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (429)
Q Consensus 251 ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 330 (429)
||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|
T Consensus 224 fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l 302 (478)
T 3ty7_A 224 FTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVV-NNTGQVCTAGTRVLVPNKIKDAFLAEL 302 (478)
T ss_dssp ECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEETTTHHHHHHHH
T ss_pred EECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHH-HhCCCCccCCCeEEEcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-C---CCCceEecEEEecCCCCCCccccC
Q 014211 331 RNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-D---EKQLKIAPTILLDVPDDSTIMKEE 404 (429)
Q Consensus 331 ~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~---~~g~~~~Ptvl~~~~~~~~~~~~E 404 (429)
+++++++++|+|. +++++||++++.+++++.++++++. .|+++++||.. + ..|+|++|||+.+++++|++++||
T Consensus 303 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE 382 (478)
T 3ty7_A 303 KEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEE 382 (478)
T ss_dssp HHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSC
T ss_pred HHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCce
Confidence 9999999999996 5899999999999999999999985 58899999943 2 368999999999999999999999
Q ss_pred ccccceeeEecCCHHHHHHHHHhh
Q 014211 405 IFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 405 ~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+||||++|++|+|.+|||+++|++
T Consensus 383 ~FGPvl~v~~~~~~~eAi~~an~~ 406 (478)
T 3ty7_A 383 IFGPVMSVITYNDLDEAIQIANDT 406 (478)
T ss_dssp CCSSEEEEEEESSHHHHHHHHTCS
T ss_pred eECceeEEEecCCHHHHHHHHhCC
Confidence 999999999999999999999975
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-81 Score=637.50 Aligned_cols=392 Identities=23% Similarity=0.327 Sum_probs=364.2
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA 99 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a 99 (429)
.++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|++++
T Consensus 13 ~~~~I~G-~~~~~~~~~~~~~~~P--------~tg~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 82 (508)
T 3r64_A 13 TKHLIGG-QWVEGNSDRISTNINP--------YDDSVIA-ESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAA 82 (508)
T ss_dssp TSEEETT-EEECCCSSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred cceeECC-EEecCCCCCEEEeECC--------CCCCEEE-EECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 3799999 9999888866666665 9999998 6779999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCC
Q 014211 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (429)
Q Consensus 100 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~ 179 (429)
++|+++.++|++++++|+|||..+++ .|+..+++.+++++...+++.+ . .... ...+...++.++|+|||++|+||
T Consensus 83 ~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~-~-~~~~-~~~~~~~~~~~~P~GVv~~I~Pw 158 (508)
T 3r64_A 83 ELLEEHREEIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHG-R-ISPS-NTPGKENRVYRVAKGVVGVISPW 158 (508)
T ss_dssp HHHHHTHHHHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHTTSTTTCCE-E-EECC-SSTTEEEEEEEEECSEEEEECCS
T ss_pred HHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhcC-c-cccc-CCCCceeEEEEecceEEEEECCC
Confidence 99999999999999999999999997 5999999999999987765433 2 1111 12245678999999999999999
Q ss_pred chhhhhhhhHHHHHHhcCCeEEecCCCCChHHH-HHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCCh
Q 014211 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS-SLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 180 n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~-~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~ 255 (429)
|||+...++++++||++||+||+|||+.+|+++ .++++++.++ +|+|++|+++|+ .+.++.|++|+ +|.|.||||+
T Consensus 159 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~ 238 (508)
T 3r64_A 159 NFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGST 238 (508)
T ss_dssp SSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCH
T ss_pred cchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCH
Confidence 999999999999999999999999999999999 9999999999 999999999994 78899999997 9999999999
Q ss_pred HHHHHHHHHHhc--ccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014211 256 RVGRIVMAAAAK--HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 256 ~~~~~i~~~~~~--~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
.+|+.|.+.+++ +++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++
T Consensus 239 ~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 317 (508)
T 3r64_A 239 PVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEA 317 (508)
T ss_dssp HHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TSTTCTTTCCSEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHH-hcCCCCcccCcEEEEehhHHHHHHHHHHHH
Confidence 999999999998 89999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhc-CCEEEeCCccCCCCceEecEEEecCCCCCCccccCcccccee
Q 014211 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~ 411 (429)
++++++|+|. +++++||++++.+++++.+++++++. |+++++||.. .|+|++|||+.+++++|++++||+||||++
T Consensus 318 ~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~ 395 (508)
T 3r64_A 318 VKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLIS 395 (508)
T ss_dssp HHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEE
T ss_pred HHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEE
Confidence 9999999996 58999999999999999999999864 7799999976 689999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHhh
Q 014211 412 IVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 412 v~~~~~~~eai~l~n~~ 428 (429)
|++|+|++|||+++|++
T Consensus 396 v~~~~~~deAi~~aN~~ 412 (508)
T 3r64_A 396 VLKADDEAHAAELANAS 412 (508)
T ss_dssp EEEESSHHHHHHHHTSS
T ss_pred EEEeCCHHHHHHHHhCC
Confidence 99999999999999975
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-81 Score=634.91 Aligned_cols=395 Identities=21% Similarity=0.288 Sum_probs=362.3
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 014211 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 97 (429)
+..++|||| +|+.+.++++++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|++
T Consensus 5 ~~~~~~i~g-~~~~~~~~~~~~~~~P--------~t~~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 74 (485)
T 4dng_A 5 TLNKSFING-KWTGGESGRTEDILNP--------YDQSVIT-TASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQK 74 (485)
T ss_dssp GCCSEEETT-EEECCSSSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred cccceeECC-EEecCCCCCeEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHH
Confidence 346799999 9999888866666666 8999988 67799999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEc
Q 014211 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 177 (429)
+++.|+++.++|++++++|+|||+.+++ .|+..+++.++++++..+...+.. .... ...+...++.++|+|||++|+
T Consensus 75 ~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~-~~~~-~~~~~~~~~~~~P~GVv~~I~ 151 (485)
T 4dng_A 75 ARGYLHENRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGELGGVK-EVPS-DIEGKTNKIYRLPLGVISSIS 151 (485)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCSCEE-CCCC-SSTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCee-cccc-CCCCceEEEEEecceEEEEEC
Confidence 9999999999999999999999999997 599999999999999887643322 1111 123456789999999999999
Q ss_pred CCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHH-HHHHHHHhhh-cCCCceEEecCCH-HHHHHHHhcC-CCEEEEeC
Q 014211 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS-SLLAKLLEDY-VDNSAVRVVEGAV-AETSALLEQK-WDKILYTG 253 (429)
Q Consensus 178 p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~-~~l~~~l~~a-lP~~~v~~v~~~~-~~~~~L~~~~-v~~v~ftG 253 (429)
|||||+...++++++||++||+||+|||+.+|+++ .+|.+++.++ +|+|+||+++|+. +.++.|++|+ ++.|.|||
T Consensus 152 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTG 231 (485)
T 4dng_A 152 PFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTG 231 (485)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEE
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEEC
Confidence 99999999999999999999999999999999999 9999999999 9999999999965 4889999997 99999999
Q ss_pred ChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014211 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 254 s~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
|+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++
T Consensus 232 S~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 310 (485)
T 4dng_A 232 STAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTAR 310 (485)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHT-TCC----CCEEEEEEEHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCccccCCEEEEeHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCcccccee
Q 014211 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~ 411 (429)
++++++|+|. +++++||++++.+++++.++++++. .|+++++||.. .|+|++|||+.+++++|++++||+||||++
T Consensus 311 ~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~ 388 (485)
T 4dng_A 311 VKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIAT 388 (485)
T ss_dssp HHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEE
T ss_pred HHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC--CCcEECCEEEecCCCCChhhcCccccceEE
Confidence 9999999996 5889999999999999999999986 57899999976 689999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHhh
Q 014211 412 IVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 412 v~~~~~~~eai~l~n~~ 428 (429)
|++|+|++|||+++|++
T Consensus 389 v~~~~~~~eAi~~an~~ 405 (485)
T 4dng_A 389 IIKAGSDQEAIDMANDT 405 (485)
T ss_dssp EEEESSHHHHHHHHHCS
T ss_pred EEEeCCHHHHHHHHhCC
Confidence 99999999999999975
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-80 Score=629.54 Aligned_cols=391 Identities=19% Similarity=0.295 Sum_probs=362.4
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA 99 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a 99 (429)
+++|||| +|+++.+ .+ +...||+||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|++++
T Consensus 6 ~~~~I~G-~~~~~~~-~~--------~~~~~P~tg~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 74 (490)
T 3ju8_A 6 STHYIAG-QWLAGQG-ET--------LESLDPVGQGVVW-SGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFA 74 (490)
T ss_dssp CCEEETT-EEECCCS-CE--------EEEECTTTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred cCceECC-EEecCCC-Ce--------EEEECCCCCCEEE-EECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 4799999 9998753 33 4445569999998 6779999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCC
Q 014211 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (429)
Q Consensus 100 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~ 179 (429)
++|++++++|++++++|+|||..+++ .|+..+++.++|++...+.+.+..... ..+...++.++|+|||++|+||
T Consensus 75 ~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~Pw 149 (490)
T 3ju8_A 75 ATLKSRADELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPY 149 (490)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCC
Confidence 99999999999999999999999996 799999999999999988876654321 1234557789999999999999
Q ss_pred chhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHH
Q 014211 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRV 257 (429)
Q Consensus 180 n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~ 257 (429)
|||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+++|+.+.++.|++|+ +|.|.||||+.+
T Consensus 150 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~ 229 (490)
T 3ju8_A 150 NFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRT 229 (490)
T ss_dssp SSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHH
T ss_pred cchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHH
Confidence 9999999999999999999999999999999999999999999 99999999999888999999997 999999999999
Q ss_pred HHHHHHHHhcccCce-eeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCc-hHHHHHHHHHHHh
Q 014211 258 GRIVMAAAAKHLTPV-ILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDF-APKLIDSLRNELK 335 (429)
Q Consensus 258 ~~~i~~~~~~~~~~~-~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~-~~~f~~~l~~~~~ 335 (429)
|+.|.+.++++++|+ ++|+|||||+||++|||++.|++.+++++| +|+||.|++++++|||+++ +++|+++|+++++
T Consensus 230 g~~i~~~aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~ 308 (490)
T 3ju8_A 230 GNLLHSQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSA 308 (490)
T ss_dssp HHHHHHHTTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCCEEEEECCccHHHHHHHHHHHHH
Confidence 999999999999998 799999999999999999999999999999 9999999999999999997 9999999999999
Q ss_pred hhhCCC-CC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCcccccee
Q 014211 336 EFFGKN-PM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (429)
Q Consensus 336 ~~~~g~-~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~ 411 (429)
++++|+ |. +++++||++++.+++++.++++++. .|+++++||.. +..|+|++|||+. ++++|++++||+||||++
T Consensus 309 ~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~ 387 (490)
T 3ju8_A 309 TLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQ 387 (490)
T ss_dssp HCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEE
T ss_pred hccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEE
Confidence 999998 75 6889999999999999999999985 57899999865 4578999999999 999999999999999999
Q ss_pred eEecCCHHHHHHHHHhh
Q 014211 412 IVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 412 v~~~~~~~eai~l~n~~ 428 (429)
|++|+|++|||+++|++
T Consensus 388 v~~~~~~~eAi~~aN~~ 404 (490)
T 3ju8_A 388 VIRYSDFAAAIREANAT 404 (490)
T ss_dssp EEEESSHHHHHHHHHCS
T ss_pred EEEeCCHHHHHHHHhcC
Confidence 99999999999999975
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-81 Score=632.85 Aligned_cols=389 Identities=22% Similarity=0.358 Sum_probs=360.6
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 014211 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 98 (429)
..++|||| +|+.+.+ +++++|| +||++++ .++.++.+|+++++++|++||+.|+.+++.+|.++|+++
T Consensus 4 ~~~~~i~g-~~~~~~~--~~~~~~P--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 71 (475)
T 1euh_A 4 QYKNYVNG-EWKLSEN--EIKIYEP--------ASGAELG-SVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKV 71 (475)
T ss_dssp BCCEEETT-EEECCSS--EEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred ccceeECC-EEecCCC--ceEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHH
Confidence 34789999 9998744 5666655 9999998 677999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCC----Ccc-eEEeecceEE
Q 014211 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYP----SSA-EIISEPLGVV 173 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~Gvv 173 (429)
+++|+++.++|++++++|+|||+.+++ .|+..+++.++|+++..+++.+.... .. ..+ ... ++.++|+|||
T Consensus 72 a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~P~GVv 147 (475)
T 1euh_A 72 ADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLE-GG--SFEAASKKKIAVVRREPVGLV 147 (475)
T ss_dssp HHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEE-GG--GTCGGGTTEEEEEEEEECSEE
T ss_pred HHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccc-CC--CCCccccceeeEEEEeccceE
Confidence 999999999999999999999999996 79999999999999999887654321 11 123 355 8999999999
Q ss_pred EEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEE
Q 014211 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKIL 250 (429)
Q Consensus 174 ~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ 250 (429)
++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+++|+ .+.++.|++|+ +|.|.
T Consensus 148 ~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ 227 (475)
T 1euh_A 148 LAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFIN 227 (475)
T ss_dssp EEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEE
T ss_pred EEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEE
Confidence 9999999999999999999999999999999999999999999999999 999999999995 55789999997 99999
Q ss_pred EeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHH
Q 014211 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (429)
Q Consensus 251 ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 330 (429)
||||+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|
T Consensus 228 fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l 304 (475)
T 1euh_A 228 FTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKI 304 (475)
T ss_dssp EESCHHHHHHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHH
T ss_pred EECchHHHHHHHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCCCCcEEEEehhHHHHHHHHH
Confidence 9999999999999887 8999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccc
Q 014211 331 RNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 331 ~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (429)
+++++++++|+|.+++++||++++.+++++.++++++. .|+++++||.. .|+|++|||+.+++++|++++||+||||
T Consensus 305 ~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPv 382 (475)
T 1euh_A 305 REKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPV 382 (475)
T ss_dssp HHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSE
T ss_pred HHHHHhccCCCccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccce
Confidence 99999999999976889999999999999999999986 57799999875 5899999999999999999999999999
Q ss_pred eeeEecCCHHHHHHHHHhh
Q 014211 410 LPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~~~eai~l~n~~ 428 (429)
++|++|+|++|||+++|++
T Consensus 383 l~v~~~~~~~eai~~an~~ 401 (475)
T 1euh_A 383 LPIIRVTSVEEAIEISNKS 401 (475)
T ss_dssp EEEEEESCHHHHHHHHHHS
T ss_pred EEEEecCCHHHHHHHHhCC
Confidence 9999999999999999975
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-81 Score=632.65 Aligned_cols=381 Identities=25% Similarity=0.377 Sum_probs=349.4
Q ss_pred eeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHH
Q 014211 22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANM 101 (429)
Q Consensus 22 ~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~ 101 (429)
+|||| +|+.+ +. ++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|++++++
T Consensus 2 ~~I~G-~~~~~--~~-~~~~nP--------~tg~~i~-~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~ 68 (486)
T 3pqa_A 2 MFIDG-KWINR--ED-MDVINP--------YSLEVIK-KIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQ 68 (486)
T ss_dssp --------CCC--CC-EEEECT--------TTCCEEE-EECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHH
T ss_pred eeECC-EEecC--CC-eEEECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Confidence 69999 99986 33 555555 9999998 777999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCch
Q 014211 102 IEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNY 181 (429)
Q Consensus 102 l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~ 181 (429)
|+++.++|++++++|+|||..+++ .|+..+++.++|++..+++|.+..... .+...++.++|+|||++|+||||
T Consensus 69 l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~I~PwN~ 142 (486)
T 3pqa_A 69 IKEKKEELAKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPS-----DDRLIFTRREPVGIVGAITPFNF 142 (486)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEEECC-----TTEEEEEEEEECSEEEEEECSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceecC-----CCceeEEEEccccEEEEECCCch
Confidence 999999999999999999999996 699999999999999999876543211 14567899999999999999999
Q ss_pred hhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-----cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCC
Q 014211 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-----VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGS 254 (429)
Q Consensus 182 P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-----lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs 254 (429)
|+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+++|+ .+.++.|++|+ +|.|.||||
T Consensus 143 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS 222 (486)
T 3pqa_A 143 PLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGS 222 (486)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECC
Confidence 99999999999999999999999999999999999999988 999999999994 55689999997 999999999
Q ss_pred hHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHH
Q 014211 255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334 (429)
Q Consensus 255 ~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~ 334 (429)
+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|++++
T Consensus 223 ~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 299 (486)
T 3pqa_A 223 SKVGELITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKA 299 (486)
T ss_dssp HHHHHHHHHHCC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHH
T ss_pred hHHHHHHHHHcC--CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHH-hcCCCCccCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999887 8999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred hhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceee
Q 014211 335 KEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (429)
Q Consensus 335 ~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v 412 (429)
+++++|+|. +++++||++++.+++++.++|+++. .|+++++||.. .|+|++|||+ +++++|++++||+||||++|
T Consensus 300 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v 376 (486)
T 3pqa_A 300 KVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPI 376 (486)
T ss_dssp HTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEE
T ss_pred HhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEE
Confidence 999999996 6899999999999999999999986 57899999975 5899999999 99999999999999999999
Q ss_pred EecCCHHHHHHHHHhh
Q 014211 413 VTVSIVSSAHFKLKAC 428 (429)
Q Consensus 413 ~~~~~~~eai~l~n~~ 428 (429)
++|+| +|||+++|++
T Consensus 377 ~~~~~-deAi~~aN~~ 391 (486)
T 3pqa_A 377 IRTNE-EEMIDIANST 391 (486)
T ss_dssp EEECH-HHHHHHHTCS
T ss_pred EEEcH-HHHHHHHhcC
Confidence 99999 9999999975
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-81 Score=634.33 Aligned_cols=393 Identities=21% Similarity=0.283 Sum_probs=361.7
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA 99 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a 99 (429)
.++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|++++
T Consensus 6 ~~~~i~g-~~~~~~~~~~~~~~~P--------~t~~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 75 (486)
T 1t90_A 6 LKNYING-EWVESKTDQYEDVVNP--------ATKEVLC-QVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQ 75 (486)
T ss_dssp CCEEETT-EEECCSCSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred cceeECC-EEecCCCCCeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Confidence 4689999 9999877755665555 9999988 6779999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCC
Q 014211 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (429)
Q Consensus 100 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~ 179 (429)
++|++++++|++++++|+|||+.++. .|+..+++.++|+++..+...+ +.... ...+...++.++|+|||++|+||
T Consensus 76 ~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g-~~~~~--~~~~~~~~~~~~P~GVV~~I~Pw 151 (486)
T 1t90_A 76 QLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMG-DSLAS--IATDVEAANYRYPIGVVGGIAPF 151 (486)
T ss_dssp HHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCE-EEEEE--EETTEEEEEEEEECSEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-ccccc--CCCCceeEEEecccCEEEEECCC
Confidence 99999999999999999999999996 7999999999999876554333 22111 11234568899999999999999
Q ss_pred chhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHH
Q 014211 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRV 257 (429)
Q Consensus 180 n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~ 257 (429)
|||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+
T Consensus 152 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~ 231 (486)
T 1t90_A 152 NFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPV 231 (486)
T ss_dssp SCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHH
T ss_pred chhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999999999 99999999999878899999997 999999999999
Q ss_pred HHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccE-EEEeCCchHHHHHHHHHHHhh
Q 014211 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDY-IITTKDFAPKLIDSLRNELKE 336 (429)
Q Consensus 258 ~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~-v~V~~~~~~~f~~~l~~~~~~ 336 (429)
|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++ +|||++ +++|+++|++++++
T Consensus 232 g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~ 309 (486)
T 1t90_A 232 GEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAF-GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVAD 309 (486)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTT
T ss_pred HHHHHHHHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHH-hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 999999999999 999999 99999999999999
Q ss_pred hhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc--CCCCceEecEEEecCCCCCCccccCccccceee
Q 014211 337 FFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR--DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (429)
Q Consensus 337 ~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~--~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v 412 (429)
+++|+|. +++++||++++.+++++.++++++. .|+++++||.. +..|+|++|||+.+++++|++++||+||||++|
T Consensus 310 ~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v 389 (486)
T 1t90_A 310 IKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSV 389 (486)
T ss_dssp CCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred cccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEE
Confidence 9999986 5889999999999999999999985 47899999974 236899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHhh
Q 014211 413 VTVSIVSSAHFKLKAC 428 (429)
Q Consensus 413 ~~~~~~~eai~l~n~~ 428 (429)
++|+|++|||+++|++
T Consensus 390 ~~~~~~~eai~~aN~~ 405 (486)
T 1t90_A 390 IRVKNLKEAIEIANKS 405 (486)
T ss_dssp EEESSHHHHHHHHHHS
T ss_pred EEeCCHHHHHHHHhCC
Confidence 9999999999999975
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-80 Score=625.31 Aligned_cols=375 Identities=21% Similarity=0.310 Sum_probs=354.2
Q ss_pred eEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhh
Q 014211 46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125 (429)
Q Consensus 46 ~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 125 (429)
+.+.||+||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|++++++|+++.++|++++++|+|||..+++
T Consensus 6 ~~~~nP~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 6 YQSVNPYTNEAFA-SYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CEEEETTTTEEEE-ECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred cceeCCCCCCEEE-EECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 5666779999998 788999999999999999999999999999999999999999999999999999999999999997
Q ss_pred HhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCC
Q 014211 126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 205 (429)
Q Consensus 126 ~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps 205 (429)
.|+..+++.++|+++.+++|.+...... .+...++.++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 85 -~ev~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps 159 (484)
T 3ros_A 85 -EEVELCVSICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHA 159 (484)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECC
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 7999999999999999999887654321 35678999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhh-cCCCceEEecCCHH-HHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcE
Q 014211 206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAVA-ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282 (429)
Q Consensus 206 ~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~-~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~ 282 (429)
+.+|+++.+|++++.++ +|+|++|+|+|+.+ .++ |++|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+
T Consensus 160 ~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~ 238 (484)
T 3ros_A 160 HNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAF 238 (484)
T ss_dssp TTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEE
T ss_pred CCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcc
Confidence 99999999999999999 99999999999654 566 99997 9999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHH
Q 014211 283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLA 361 (429)
Q Consensus 283 iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~ 361 (429)
||++|||++.|++.+++++| +|+||.|++++|||||+++|++|+++|+++++++++|+|. +++++||++++.+++++.
T Consensus 239 iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~ 317 (484)
T 3ros_A 239 IVLDDADPQVLRNVLNDART-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLE 317 (484)
T ss_dssp EECTTCCHHHHHHHHTTTTT-GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHH
T ss_pred eeCCCCCHHHHHHHHHHHHh-cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHH
Confidence 99999999999999999999 9999999999999999999999999999999999999996 689999999999999999
Q ss_pred hHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 362 SLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 362 ~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++|+++. .|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++
T Consensus 318 ~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 386 (484)
T 3ros_A 318 AQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDS 386 (484)
T ss_dssp HHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSS
T ss_pred HHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCC
Confidence 9999986 57899999975 4579999999999999999999999999999999999999999999975
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-81 Score=631.34 Aligned_cols=391 Identities=21% Similarity=0.319 Sum_probs=360.3
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh-hhcCCCHHHHHHHHHH
Q 014211 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN-SRKTKSYEWRMSQIQS 97 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~-~w~~~~~~~R~~~L~~ 97 (429)
..++|||| +|+.+. .+++++|| +||++++ .++.++.+|+++|+++|++||+ .|+.+++.+|.++|++
T Consensus 18 ~~~~~i~g-~~~~~~--~~~~v~nP--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~ 85 (501)
T 1uxt_A 18 VYPSYLAG-EWGGSG--QEIEVKSP--------IDLATIA-KVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRK 85 (501)
T ss_dssp EECEECSS-SEECCS--CEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHH
T ss_pred ccceeECC-EEecCC--CeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHH
Confidence 45799999 999873 45555555 8999998 7779999999999999999999 9999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCC--CCcceEEeecceEEEE
Q 014211 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTY--PSSAEIISEPLGVVLV 175 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~Gvv~~ 175 (429)
++++|++++++|++++++|+|||..+++ .|+..+++.++|+++.++++.+... ....... +...++.++|+|||++
T Consensus 86 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~P~GVv~~ 163 (501)
T 1uxt_A 86 AADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYI-PGDWTYDTLETEGLVRREPLGVVAA 163 (501)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEE-ESTTSSTTTTEEEEEEEEECSEEEE
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-cccccCCCcCceEEEEEeeccEEEE
Confidence 9999999999999999999999999997 7999999999999999888754331 1110011 2256899999999999
Q ss_pred EcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeC
Q 014211 176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 176 i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftG 253 (429)
|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+++|+.+.++.|++|+ +|.|.|||
T Consensus 164 I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTG 243 (501)
T 1uxt_A 164 ITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTG 243 (501)
T ss_dssp ECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEES
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeC
Confidence 99999999999999999999999999999999999999999999999 99999999999667889999996 99999999
Q ss_pred ChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014211 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 254 s~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
|+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++
T Consensus 244 S~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 320 (501)
T 1uxt_A 244 STEVGERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKR 320 (501)
T ss_dssp CHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-cCCCCCCcCCcEEEeccchHHHHHHHHHHH
Confidence 9999999999887 8999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCC-ceEecEEEecCC---CCCCccccCccc
Q 014211 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQ-LKIAPTILLDVP---DDSTIMKEEIFG 407 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g-~~~~Ptvl~~~~---~~~~~~~~E~fg 407 (429)
++++++|+|. +++++||++++.+++++.++++++. .|+++++||.. .| +|++|||+.+++ ++|.+++||+||
T Consensus 321 ~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFG 398 (501)
T 1uxt_A 321 LSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFA 398 (501)
T ss_dssp HHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCS
T ss_pred HHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccC
Confidence 9999999996 5899999999999999999999986 46799999976 68 999999999999 999999999999
Q ss_pred cceeeEecCCHHHHHHHHHhh
Q 014211 408 PLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 408 Pv~~v~~~~~~~eai~l~n~~ 428 (429)
||++|++|+|++|||+++|++
T Consensus 399 PVl~v~~~~~~deAi~~aN~~ 419 (501)
T 1uxt_A 399 PVALAVEVKDLDQAIELANGR 419 (501)
T ss_dssp SEEEEEEESSHHHHHHHHHTS
T ss_pred ceEEEEeeCCHHHHHHHHhcC
Confidence 999999999999999999985
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-80 Score=631.87 Aligned_cols=404 Identities=17% Similarity=0.171 Sum_probs=363.5
Q ss_pred hhhhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCCc-chhhhhcccCCCHHHHHHHHHHHHHHhhhhcC
Q 014211 7 RAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKT 85 (429)
Q Consensus 7 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~ 85 (429)
.+|.++... ..+.++|||| +|+.+.+ + ....||+| |++++ .++.++.+|+++||++|++||+.|+.
T Consensus 52 ~a~~~~~~~-~~~~~~~I~G-~~~~~~~--~--------~~~~~P~~~~~~i~-~~~~a~~~dv~~Av~aA~~A~~~W~~ 118 (563)
T 4e3x_A 52 KALKDLKGQ-TEAIPCVVGD-EEVWTSD--I--------QYQLSPFNHAHKVA-KFCYADKALLNRAIDAALAARKEWDL 118 (563)
T ss_dssp HHHHTTTTC-CEECCEEETT-EEECCSC--E--------EEEEETTEEEEEEE-EEECCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhC-CccCCeEECC-EEeecCC--c--------eeeeCCCCCCcEEE-EEeCCCHHHHHHHHHHHHHHHHHHhc
Confidence 455665554 4678999999 9998643 2 33456687 67887 67799999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHh-HHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcce
Q 014211 86 KSYEWRMSQIQSIANMIEEK-EEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAE 164 (429)
Q Consensus 86 ~~~~~R~~~L~~~a~~l~~~-~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (429)
+++.+|+++|++++++|+++ +++|++++++|+|||+.+++..++..+++.++|+++.++++.+...... ..+...+
T Consensus 119 ~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~ 195 (563)
T 4e3x_A 119 KPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISV---PPSTNHT 195 (563)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCC---TTEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCC---CCCcceE
Confidence 99999999999999999998 9999999999999999999753499999999999999998877543221 1123345
Q ss_pred EEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHH
Q 014211 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALL 242 (429)
Q Consensus 165 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~ 242 (429)
.++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+ .+.++.|+
T Consensus 196 ~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~ 274 (563)
T 4e3x_A 196 VYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVT 274 (563)
T ss_dssp ECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHT
T ss_pred EEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHH
Confidence 677778999999999999999999999999 699999999999999999999999999 999999999995 45789999
Q ss_pred hcC-CCEEEEeCChHHHHHHHHHHhcccCc------eeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccE
Q 014211 243 EQK-WDKILYTGSPRVGRIVMAAAAKHLTP------VILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDY 315 (429)
Q Consensus 243 ~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~------~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~ 315 (429)
+|+ ++.|.||||+.+|+.|.+.++++++| +++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 275 ~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f-~~~GQ~C~A~~r 353 (563)
T 4e3x_A 275 SSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAF-EYGGQKCSACSR 353 (563)
T ss_dssp TCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEE
T ss_pred hCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHH-hcCCCCCcCCcE
Confidence 997 99999999999999999999998885 9999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHhhhhCCCC-C-CCCcccccCCHHHHHHHHhHHHhhh--cCCEEEeCCccC-CCCceEecEE
Q 014211 316 IITTKDFAPKLIDSLRNELKEFFGKNP-M-ESKDLSRIVNPFHFARLASLLDEDK--VSDKIVYGGQRD-EKQLKIAPTI 390 (429)
Q Consensus 316 v~V~~~~~~~f~~~l~~~~~~~~~g~~-~-~~~~~gpl~~~~~~~~~~~~i~~a~--~~~~vl~gg~~~-~~g~~~~Ptv 390 (429)
+|||+++|++|+++|+++++++++|+| . +++++||++++.+++++.++|++++ .|+++++||..+ ..|+|++|||
T Consensus 354 v~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTv 433 (563)
T 4e3x_A 354 LYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCI 433 (563)
T ss_dssp EEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEE
T ss_pred EEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEE
Confidence 999999999999999999999999999 5 5899999999999999999999987 467999999763 4689999999
Q ss_pred EecCCCCCCccccCccccceeeEecCC--HHHHHHHH-Hhh
Q 014211 391 LLDVPDDSTIMKEEIFGPLLPIVTVSI--VSSAHFKL-KAC 428 (429)
Q Consensus 391 l~~~~~~~~~~~~E~fgPv~~v~~~~~--~~eai~l~-n~~ 428 (429)
+.+++++|++++||+||||++|++|+| ++|||+++ |++
T Consensus 434 l~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s 474 (563)
T 4e3x_A 434 IESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTT 474 (563)
T ss_dssp EEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSS
T ss_pred EecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCC
Confidence 999999999999999999999999997 69999999 553
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-78 Score=610.82 Aligned_cols=378 Identities=22% Similarity=0.339 Sum_probs=355.4
Q ss_pred CceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchh
Q 014211 44 TSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFE 123 (429)
Q Consensus 44 ~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 123 (429)
.++...||+||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.++|++++++|+|||..+
T Consensus 7 ~~~~~~~P~t~~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T 3etf_A 7 TQALSVNPATGQTLA-AMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQ 85 (462)
T ss_dssp CCSEEECTTTCCEEE-ECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred CccceECCCCCCEEE-EecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 335566669999998 6789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEec
Q 014211 124 TFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLK 203 (429)
Q Consensus 124 a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~k 203 (429)
++ .|+..+++.++|+++..+++.+.... ...+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 86 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlK 160 (462)
T 3etf_A 86 AR-AEVTKSAALCDWYAEHGPAMLNPEPT----LVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLK 160 (462)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEC----SSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEE
T ss_pred HH-HHHHHHHHHHHHHHHhHHHhcCCccc----CCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEE
Confidence 97 69999999999999999888765521 12345678999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCc
Q 014211 204 PSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281 (429)
Q Consensus 204 ps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~ 281 (429)
||+.+|+++.++++++.++ +|+|++|+++|+.+.+..|++|+ ++.|.||||+.+|+.|.+.++++++|+++|+|||||
T Consensus 161 ps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p 240 (462)
T 3etf_A 161 HAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDP 240 (462)
T ss_dssp CCTTCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEE
T ss_pred CCCCCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCc
Confidence 9999999999999999999 99999999999888899999996 999999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHH
Q 014211 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARL 360 (429)
Q Consensus 282 ~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~ 360 (429)
+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++++++++|+|. +++++||+++..+++++
T Consensus 241 ~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 241 FIVLNDADLELAVKAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred cEECCCCCHHHHHHHHHHHHH-hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 999999999999999999999 9999999999999999999999999999999999999996 68899999999999999
Q ss_pred HhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 361 ASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 361 ~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
.++++++. .|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~ 389 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDS 389 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCS
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCC
Confidence 99999986 57899999974 4578999999999999999999999999999999999999999999975
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-79 Score=654.55 Aligned_cols=404 Identities=17% Similarity=0.250 Sum_probs=369.6
Q ss_pred hhhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCCc-chhhhhcccCCCHHHHHHHHHHHHHHhhhhcCC
Q 014211 8 AFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTK 86 (429)
Q Consensus 8 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~ 86 (429)
++.++......+.++|||| +|+.+ +.+++++ ||+| |++++ .++.++.+|+++|+++|++||+.|+.+
T Consensus 520 ~~~~~~~~~~~~~~~~I~G-~~~~~--~~~~~v~--------nPa~~~~~i~-~v~~a~~~dv~~Av~aA~~A~~~W~~~ 587 (1026)
T 4f9i_A 520 HIAQVRTQLGKTYPLFING-KEVRT--NDLIPTV--------NPNKPSEVLG-QICQAGTTEVGDAIAAAKAAFPAWRDT 587 (1026)
T ss_dssp HHHHHHTTCCEEECEEETT-EEECC--SCEEEEE--------ETTEEEEEEE-EEECCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHhhccccccCceECC-EEecC--CCcEEEe--------CCCCCCceEE-EEeCCCHHHHHHHHHHHHHHHHhcccC
Confidence 3444555556678999999 99974 4445554 5587 77777 677999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEE
Q 014211 87 SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEII 166 (429)
Q Consensus 87 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (429)
|+.+|+++|++++++|++++++|++++++|+|||+.++. .|+..+++.++|++...+++.+...... ..+..+++.
T Consensus 588 ~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~aid~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~ 663 (1026)
T 4f9i_A 588 DPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQPQRVGH---APGELNHYF 663 (1026)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECC---CTTEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHH-HHHHHHHHHHHHHHHHHHHhcCCccccC---CCCccceeE
Confidence 999999999999999999999999999999999999996 6999999999999999998776543221 235567889
Q ss_pred eecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhc
Q 014211 167 SEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQ 244 (429)
Q Consensus 167 ~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~ 244 (429)
++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+|+|+ .+.+..|++|
T Consensus 664 ~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~h 743 (1026)
T 4f9i_A 664 YEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDH 743 (1026)
T ss_dssp EEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHC
T ss_pred eecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999 999999999994 5689999999
Q ss_pred C-CCEEEEeCChHHHHHHHHHHh------cccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEE
Q 014211 245 K-WDKILYTGSPRVGRIVMAAAA------KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317 (429)
Q Consensus 245 ~-v~~v~ftGs~~~~~~i~~~~~------~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~ 317 (429)
+ ++.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++|+| .|+||.|++++++|
T Consensus 744 p~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf-~~aGQ~C~A~~rl~ 822 (1026)
T 4f9i_A 744 PDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAF-GFQGQKCSACSRVI 822 (1026)
T ss_dssp TTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEE
T ss_pred CCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCCCCCCceEE
Confidence 7 999999999999999999988 468999999999999999999999999999999999 99999999999999
Q ss_pred EeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCCC-CceEecEEEecCC
Q 014211 318 TTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEK-QLKIAPTILLDVP 395 (429)
Q Consensus 318 V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~~-g~~~~Ptvl~~~~ 395 (429)
||+++|++|+++|++.++++++|+|. +++++||+|++.+++++.++|++++..+++++||..+.. |+|++|||+.+++
T Consensus 823 V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G~~v~gG~~~~~~G~fv~PTvl~~v~ 902 (1026)
T 4f9i_A 823 VLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIK 902 (1026)
T ss_dssp EEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHSEEEEECCCCSSSSCCCCCEEEESCC
T ss_pred ecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCCeEEecCCcCCCCCceecceeeecCC
Confidence 99999999999999999999999996 589999999999999999999998765599999987555 9999999999999
Q ss_pred CCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 396 DDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 396 ~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++.+++||+||||++|++|+|++|||+++|++
T Consensus 903 ~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t 935 (1026)
T 4f9i_A 903 PEHRIAQEEIFGPVLAVMRAKDFDQAIEWANST 935 (1026)
T ss_dssp TTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCS
T ss_pred CCccccCceecCcEEEEEEeCCHHHHHHHHHcC
Confidence 999999999999999999999999999999975
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-78 Score=606.77 Aligned_cols=374 Identities=31% Similarity=0.533 Sum_probs=338.3
Q ss_pred eEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhh
Q 014211 46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125 (429)
Q Consensus 46 ~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 125 (429)
....+|.||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+|||..+++
T Consensus 8 ~~~~~~~~~~~i~-~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 86 (457)
T 3lns_A 8 HHHSSGHIDDDDK-HMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVD 86 (457)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccccCCCCCCeee-ecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 4556669999999 788999999999999999999999999999999999999999999999999999999999999997
Q ss_pred HhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCC
Q 014211 126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 205 (429)
Q Consensus 126 ~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps 205 (429)
..|+..+++.++++++.+++|.++..........+...++.++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 87 ~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps 166 (457)
T 3lns_A 87 LAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPS 166 (457)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECC
Confidence 56999999999999999999887553332222235668899999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhhcCCCceEEecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEc
Q 014211 206 EIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285 (429)
Q Consensus 206 ~~~~~~~~~l~~~l~~alP~~~v~~v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~ 285 (429)
+.+|+++.++++++.+++|+|+||+++|+.+.+..|+++++|.|.||||+.+|+.|.+.++++++|+++|+|||||+||+
T Consensus 167 ~~tp~t~~~l~~l~~~alP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~ 246 (457)
T 3lns_A 167 ETTPETSAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVL 246 (457)
T ss_dssp TTCHHHHHHHHHHHHHHCCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEEC
T ss_pred CCChHHHHHHHHHHHHhCCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeEC
Confidence 99999999999999999999999999998888999998669999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHH
Q 014211 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD 365 (429)
Q Consensus 286 ~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~ 365 (429)
+|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|++++++++ |.+. ++||++++.+++++.++++
T Consensus 247 ~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i~ 321 (457)
T 3lns_A 247 PDADLDQTVNQLMFGKF-INSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLLE 321 (457)
T ss_dssp TTCCHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-HhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999987 5545 9999999999999999999
Q ss_pred hhhcCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHh
Q 014211 366 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKA 427 (429)
Q Consensus 366 ~a~~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~ 427 (429)
++. +++++||..+..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+
T Consensus 322 ~a~--~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~ 381 (457)
T 3lns_A 322 ATQ--GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNK 381 (457)
T ss_dssp HCC--SEEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHH
T ss_pred hcC--CeEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHc
Confidence 763 699999987667999999999999999999999999999999999999999999998
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-78 Score=612.09 Aligned_cols=377 Identities=25% Similarity=0.315 Sum_probs=348.8
Q ss_pred ceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhh
Q 014211 45 SFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124 (429)
Q Consensus 45 ~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 124 (429)
++.++||+||++++ .++.++.+|+++||++|++||+.|+++++.+|.++|++++++|++++++|++++++|+||+....
T Consensus 7 t~~v~nP~tg~~~~-~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~ 85 (474)
T 4h7n_A 7 TIEVRNPRTGKFDY-VIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSITV 85 (474)
T ss_dssp CEEEECTTTCSEEE-EECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHHH
T ss_pred EEeeECCCCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 35555559999998 67799999999999999999999999999999999999999999999999999999999986443
Q ss_pred hHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecC
Q 014211 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKP 204 (429)
Q Consensus 125 ~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kp 204 (429)
.|+..+++.+++++....++......... .+....+..++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 86 --~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKp 161 (474)
T 4h7n_A 86 --LEIDSFLASIDRWCGLAPELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKP 161 (474)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHCCEEEECS--STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEE
T ss_pred --HHHHHHHHHHHHHHhhhhhcccccccCCC--CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecc
Confidence 59999999999999988887765543221 22344567889999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEE
Q 014211 205 SEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283 (429)
Q Consensus 205 s~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~i 283 (429)
|+.+|.++..+.+++.++ +|+|++++++|+.+.+..|+.| ++.|.||||+.+|+.|.+.++++++|+++|+|||||+|
T Consensus 162 s~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~i 240 (474)
T 4h7n_A 162 SEIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAI 240 (474)
T ss_dssp CTTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEE
T ss_pred cccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCccc
Confidence 999999999999999999 9999999999998999999976 99999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHh
Q 014211 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLAS 362 (429)
Q Consensus 284 V~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~ 362 (429)
|++|||++.+++.+++++| +|+||.|++++|+|||+++|++|+++++++++++++|+|. +++++||++++.+.+++.+
T Consensus 241 V~~dAdl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~ 319 (474)
T 4h7n_A 241 VLESANLELATSAILWGAV-VNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIIND 319 (474)
T ss_dssp ECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHH
T ss_pred cCchhhHHHHHHHHHhhhc-cCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999999999999999999999997 5889999999999999999
Q ss_pred HHHhhh-cCCEEEeCCccC--CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 363 LLDEDK-VSDKIVYGGQRD--EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 363 ~i~~a~-~~~~vl~gg~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++++. .+++++.||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|++
T Consensus 320 ~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 388 (474)
T 4h7n_A 320 HILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDT 388 (474)
T ss_dssp HHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCS
T ss_pred HHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcC
Confidence 999986 577888998763 468999999999999999999999999999999999999999999975
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-77 Score=600.34 Aligned_cols=360 Identities=42% Similarity=0.726 Sum_probs=334.5
Q ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHH
Q 014211 63 RFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142 (429)
Q Consensus 63 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~ 142 (429)
..+.+|+++|+++|++||+.|+.+++.+|.++|++++++|+++.++|++++++|+|||..+++..|+..+++.+++++..
T Consensus 14 ~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 93 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQK 93 (469)
T ss_dssp ----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777999999999999999999999999999999999999999999999999999999999767999999999999999
Q ss_pred HHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh
Q 014211 143 LKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY 222 (429)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a 222 (429)
+++|..+..........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a 173 (469)
T 3sza_A 94 LPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY 173 (469)
T ss_dssp HHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred HHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 99888655433222223456789999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHH
Q 014211 223 VDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW 302 (429)
Q Consensus 223 lP~~~v~~v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~ 302 (429)
+|+|++|+++|+.+.+..|+.|++|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 174 lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~ 253 (469)
T 3sza_A 174 LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF 253 (469)
T ss_dssp SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHH
Confidence 99999999999877788888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCC-CCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCC
Q 014211 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNP-MESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE 381 (429)
Q Consensus 303 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~ 381 (429)
.|+||.|++++|||||+++|++|+++|+++++++. |+| ++++++||++++.+++++.++| .|+++++||..+.
T Consensus 254 -~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~~~ 327 (469)
T 3sza_A 254 -MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTGDA 327 (469)
T ss_dssp -GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCEET
T ss_pred -hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc-CCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCccCC
Confidence 99999999999999999999999999999999986 555 5789999999999999999998 4789999998766
Q ss_pred CCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 382 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 328 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 374 (469)
T 3sza_A 328 ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQR 374 (469)
T ss_dssp TTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHS
T ss_pred CCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcC
Confidence 79999999999999999999999999999999999999999999985
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-76 Score=607.39 Aligned_cols=392 Identities=15% Similarity=0.207 Sum_probs=346.9
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHH-hhhhcCCCHHHHHHHHHHH
Q 014211 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN-YNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A-~~~w~~~~~~~R~~~L~~~ 98 (429)
.++|||| +|+.+.+ .+++++|| +||++++ .++.++ +|+++|+++|++| |+.|+.+++.+|.++|+++
T Consensus 8 ~~~~i~G-~~~~~~~-~~~~v~nP--------~tg~~i~-~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~ 75 (534)
T 2y53_A 8 LKNHVAG-QWIAGTG-AGITLTDP--------VTGVALV-RVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADI 75 (534)
T ss_dssp CCEEETT-EEECCSS-SCEEEECT--------TTCCEEE-EECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred hhhEECC-EEecCCC-CeEEEECC--------CCCCEEE-EEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHH
Confidence 4689999 9998755 24555555 9999888 555777 8999999999999 5999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcc---c-ccccCCCC-cceEEeecc-eE
Q 014211 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKA---K-TSLTTYPS-SAEIISEPL-GV 172 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~---~-~~~~~~~~-~~~~~~~P~-Gv 172 (429)
+++|++++++|++++++|+|||+.++. .|+..+++.++|++...+++.+.... . .+....+. ..+..++|+ ||
T Consensus 76 a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GV 154 (534)
T 2y53_A 76 VKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGV 154 (534)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSC
T ss_pred HHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCE
Confidence 999999999999999999999999997 59999999999999988765432110 0 01111111 357889997 99
Q ss_pred EEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh--cCCCceEEecCCHHHHHHHHhc--CCCE
Q 014211 173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY--VDNSAVRVVEGAVAETSALLEQ--KWDK 248 (429)
Q Consensus 173 v~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a--lP~~~v~~v~~~~~~~~~L~~~--~v~~ 248 (429)
|++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+|+|+.. .+.++ .+|.
T Consensus 155 v~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~ 231 (534)
T 2y53_A 155 ALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSA---GLLDQIRSFDV 231 (534)
T ss_dssp EEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCT---TSGGGCCTTCE
T ss_pred EEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChH---HHHhcccccCE
Confidence 99999999999999999999999999999999999999999999999997 59999999998532 24444 3899
Q ss_pred EEEeCChHHHHHHHHHHh--cccCceeeecCCCCcEEEcCCC-----CHHHHHHHHHHHHHHhcCCCccccccEEEEeCC
Q 014211 249 ILYTGSPRVGRIVMAAAA--KHLTPVILELGGKSPAVVDSTI-----NLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321 (429)
Q Consensus 249 v~ftGs~~~~~~i~~~~~--~~~~~~~~e~~G~~~~iV~~da-----dl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~ 321 (429)
|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|| |++.|++.+++++| +|+||.|++++|||||++
T Consensus 232 V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~ 310 (534)
T 2y53_A 232 VSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMT-VKSGQKCTAIRRAFVPEA 310 (534)
T ss_dssp EEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGG
T ss_pred EEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHH-hCCCCcccCCCEEEEecc
Confidence 999999999999998875 7899999999999999999999 99999999999999 999999999999999999
Q ss_pred chHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccC-------CCCceEecEEEec
Q 014211 322 FAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD-------EKQLKIAPTILLD 393 (429)
Q Consensus 322 ~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~-------~~g~~~~Ptvl~~ 393 (429)
+|++|+++|+++++++++|+|. +++++||++++.+++++.++|+++..|+++++||... ..|+|++|||+.+
T Consensus 311 i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~ 390 (534)
T 2y53_A 311 ALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVV 390 (534)
T ss_dssp GHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEEC
T ss_pred HHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEe
Confidence 9999999999999999999996 5899999999999999999999987788999998642 3589999999999
Q ss_pred CCCC--CCccccCccccceeeEecC---CH-----HHHHHHHHhh
Q 014211 394 VPDD--STIMKEEIFGPLLPIVTVS---IV-----SSAHFKLKAC 428 (429)
Q Consensus 394 ~~~~--~~~~~~E~fgPv~~v~~~~---~~-----~eai~l~n~~ 428 (429)
++++ |.+++||+||||++|++|+ |. +|||+++|++
T Consensus 391 v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~ 435 (534)
T 2y53_A 391 NDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRG 435 (534)
T ss_dssp SCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTT
T ss_pred cCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCC
Confidence 9877 6899999999999999999 99 9999999985
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-76 Score=600.80 Aligned_cols=388 Identities=17% Similarity=0.201 Sum_probs=348.7
Q ss_pred cccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHH
Q 014211 16 AACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQI 95 (429)
Q Consensus 16 ~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L 95 (429)
.....++|||| +|+.+.+ +.||+||++++..++.++.+|+++|+++|++||+.|+.++..+|.++|
T Consensus 26 ~~~~~~~~I~G-~~~~~~~-------------v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L 91 (528)
T 3v4c_A 26 FTPKGKHLVAG-EWLDGAG-------------TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFL 91 (528)
T ss_dssp CCCCCCEEETT-EEECCSS-------------EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred cccccCceECC-EEecCCC-------------ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 46667899999 9998732 456699999985677999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHh--hcCCCcccc-cc--cCCCCcceEEeecc
Q 014211 96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY--WTKPEKAKT-SL--TTYPSSAEIISEPL 170 (429)
Q Consensus 96 ~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~--~~~~~~~~~-~~--~~~~~~~~~~~~P~ 170 (429)
++++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++.+++ |.+...... +. ...+...++.++|+
T Consensus 92 ~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 170 (528)
T 3v4c_A 92 RAIADEIEARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPV 170 (528)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEEC
T ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCC
Confidence 999999999999999999999999999996 6999999999999999987 444332111 00 01234568899999
Q ss_pred eEEEEEcCCchhhhhhh--hHHHHHHhcCCeEEecCCCCChHHHHHHHHHHh----hh-cCCCceEEecC-CHHHHHHHH
Q 014211 171 GVVLVISTWNYPFLLSL--DPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----DY-VDNSAVRVVEG-AVAETSALL 242 (429)
Q Consensus 171 Gvv~~i~p~n~P~~~~~--~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~----~a-lP~~~v~~v~~-~~~~~~~L~ 242 (429)
|||++|+|||||+...+ +++++||++||+||+|||+.+|+++.++++++. ++ +|+|+||+|+| +.+.+..|+
T Consensus 171 GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~ 250 (528)
T 3v4c_A 171 GPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALV 250 (528)
T ss_dssp SCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHH
T ss_pred cEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHH
Confidence 99999999999999865 899999999999999999999999999998765 46 99999999999 568899999
Q ss_pred hcC-CCEEEEeCChHHHHHHHHHHhccc--CceeeecCCCCcEEEcCCC---CHHHHHHHHHHHHHHhcCCCccccccEE
Q 014211 243 EQK-WDKILYTGSPRVGRIVMAAAAKHL--TPVILELGGKSPAVVDSTI---NLQVTTRRIIAGKWMANNGQACIGVDYI 316 (429)
Q Consensus 243 ~~~-v~~v~ftGs~~~~~~i~~~~~~~~--~~~~~e~~G~~~~iV~~da---dl~~aa~~i~~~~~~~~~Gq~C~~~~~v 316 (429)
+|+ ||.|.||||+.+|+.|.+.+++++ +|+++|+|||||+||++|| |++.|++.+++++| +|+||.|++++||
T Consensus 251 ~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~GQ~C~a~~rv 329 (528)
T 3v4c_A 251 QHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLT-MGAGQFCTNPGIA 329 (528)
T ss_dssp HCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGGGCCTTCCCEE
T ss_pred hCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHH-hcCCCccccCcEE
Confidence 997 999999999999999999999998 9999999999999999999 88999999999999 9999999999999
Q ss_pred EEeCC-chHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCCCCceEecEEEecCC
Q 014211 317 ITTKD-FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVP 395 (429)
Q Consensus 317 ~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~~g~~~~Ptvl~~~~ 395 (429)
|||++ +|++|+++|++++++++.+ +.+||++++.+.+++.++++ ..|+++++||.. .|+|++|||+.+++
T Consensus 330 lV~~~~i~d~f~~~l~~~~~~~~~~-----~~~gp~~~~~~~~~v~~~~~--~~Ga~v~~gG~~--~g~~~~PTvl~~~~ 400 (528)
T 3v4c_A 330 VVIEGADADRFTTAAVEALAKVAPQ-----TMLTDGIAKAYRDGQARFAT--RNAVKPLLATES--SGRDASPNLFETTG 400 (528)
T ss_dssp EEESSHHHHHHHHHHHHHHHTCCCE-----ECSCHHHHHHHHHHHHHHHT--CTTCEEEECCCC--CTTEECCEEEEEEH
T ss_pred EEecccHHHHHHHHHHHHHHhcccC-----CCCCHHHHHHHHHHHHHHHH--hCCCEEEeCCCc--CCceeccEEEEecC
Confidence 99998 9999999999999988654 67999998888888888775 467899999975 69999999999887
Q ss_pred CC---CCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 396 DD---STIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 396 ~~---~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++ |.+++||+||||++|++|+|+||||+++|++
T Consensus 401 ~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~ 436 (528)
T 3v4c_A 401 AQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGF 436 (528)
T ss_dssp HHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHC
T ss_pred cccccChhhcccccCCeEEEEecCCHHHHHHHHhcC
Confidence 77 8999999999999999999999999999985
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-73 Score=580.00 Aligned_cols=368 Identities=18% Similarity=0.215 Sum_probs=331.4
Q ss_pred eEeeeCCcchhh-hhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhh
Q 014211 46 FSCRCSATMAAE-EKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124 (429)
Q Consensus 46 ~~~~~p~tg~~~-~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 124 (429)
+.+.||+||+++ + .++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..++
T Consensus 9 ~~~~nP~tg~~i~~-~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 87 (510)
T 1ez0_A 9 FYATNAFTGEALPL-AFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRL 87 (510)
T ss_dssp EEEECTTTSSEEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred EEeECCCCCCEEEE-EECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 445555999999 6 67799999999999999999999999999999999999999999999999999999999999988
Q ss_pred hHhhHHHHHHHHHHHHHHHHh--hcCCCcccc-cccCC-C-CcceEEeecceEEEEEcCCchhhhhh--hhHHHHHHhcC
Q 014211 125 FISEISMTKSSCKLALKELKY--WTKPEKAKT-SLTTY-P-SSAEIISEPLGVVLVISTWNYPFLLS--LDPVIGAIAAG 197 (429)
Q Consensus 125 ~~~ev~~a~~~l~~~~~~~~~--~~~~~~~~~-~~~~~-~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~~~~ALaaG 197 (429)
. .|+..+++.++|+++.+++ |.+...... +...+ + ...++.++|+|||++|+|||||+... .+++++||++|
T Consensus 88 ~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaG 166 (510)
T 1ez0_A 88 T-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAG 166 (510)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHT
T ss_pred H-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcC
Confidence 5 6999999999999999986 654332110 00001 1 23578999999999999999999985 49999999999
Q ss_pred CeEEecCCCCChHHHHHHHHHHh----hh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhccc-
Q 014211 198 NAVVLKPSEIAPATSSLLAKLLE----DY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHL- 269 (429)
Q Consensus 198 N~vV~kps~~~~~~~~~l~~~l~----~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~- 269 (429)
|+||+|||+.+|+++.++++++. ++ +|+|++|+++| +.+.++.|++|+ ||.|.||||+.+|+.|.+.+++++
T Consensus 167 N~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~ 246 (510)
T 1ez0_A 167 CPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPE 246 (510)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSS
T ss_pred CEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCC
Confidence 99999999999999999999984 45 89999999999 677899999997 999999999999999999999886
Q ss_pred -CceeeecCCCCcEEEcCCCCHH--HHHHHHHHHHHHhcCCCccccccEEEEeCC-chHHHHHHHHHHHhhhhCCCCCCC
Q 014211 270 -TPVILELGGKSPAVVDSTINLQ--VTTRRIIAGKWMANNGQACIGVDYIITTKD-FAPKLIDSLRNELKEFFGKNPMES 345 (429)
Q Consensus 270 -~~~~~e~~G~~~~iV~~dadl~--~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~ 345 (429)
+|+++|+|||||+||++|||++ .+++.+++++| +|+||.|++++|||||++ +|++|+++|++++++++.
T Consensus 247 ~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~------ 319 (510)
T 1ez0_A 247 PIPFYGELGAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP------ 319 (510)
T ss_dssp CCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC------
T ss_pred CccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC------
Confidence 9999999999999999999999 99999999999 999999999999999999 999999999999998853
Q ss_pred CcccccCCHHHHHHHHhHHHhhh--cCCEEEeCCccCCCCceEecEEEecCCCC---CCccccCccccceeeEecCCHHH
Q 014211 346 KDLSRIVNPFHFARLASLLDEDK--VSDKIVYGGQRDEKQLKIAPTILLDVPDD---STIMKEEIFGPLLPIVTVSIVSS 420 (429)
Q Consensus 346 ~~~gpl~~~~~~~~~~~~i~~a~--~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fgPv~~v~~~~~~~e 420 (429)
||++++.+.+++.++++++. .|+++++||. .|+|++|||+.+++++ |.+++||+||||++|++|+|.+|
T Consensus 320 ---gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~de 393 (510)
T 1ez0_A 320 ---STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVAD 393 (510)
T ss_dssp ---BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHH
T ss_pred ---CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHH
Confidence 67888888889999998876 3679999987 3999999999887777 99999999999999999999999
Q ss_pred HHHHHHhh
Q 014211 421 AHFKLKAC 428 (429)
Q Consensus 421 ai~l~n~~ 428 (429)
||+++|++
T Consensus 394 ai~~aN~~ 401 (510)
T 1ez0_A 394 MLSLSEML 401 (510)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcC
Confidence 99999975
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-70 Score=589.68 Aligned_cols=361 Identities=21% Similarity=0.331 Sum_probs=335.9
Q ss_pred ccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHH
Q 014211 61 MQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLAL 140 (429)
Q Consensus 61 ~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~ 140 (429)
++.++.+|+++|+++|++||+.|+.+++.+|.++|++++++|+++.++|++++++|+|||+.++. .|+..+++.++|++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a 622 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYA 622 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHH
Confidence 55899999999999999999999999999999999999999999999999999999999999996 79999999999999
Q ss_pred HHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHh
Q 014211 141 KELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE 220 (429)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~ 220 (429)
...+++.+..... ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 623 ~~a~~~~g~~~~~--~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 623 AQGRKLFGSETAM--PGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHSSCEEC--CCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHhhcCccccc--cCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 9998876543211 11235567889999999999999999999999999999999999999999999999999999999
Q ss_pred hh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcc---cCceeeecCCCCcEEEcCCCCHHHHHH
Q 014211 221 DY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKH---LTPVILELGGKSPAVVDSTINLQVTTR 295 (429)
Q Consensus 221 ~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~---~~~~~~e~~G~~~~iV~~dadl~~aa~ 295 (429)
++ +|+|+||+|+|+.+.+..|++|+ |+.|.||||+.+|+.|.+.++++ ++|+++|+|||||+||++|||++.|++
T Consensus 701 eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~ 780 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVAD 780 (1001)
T ss_dssp HHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHH
T ss_pred HhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHH
Confidence 99 99999999999655599999997 99999999999999999998864 899999999999999999999999999
Q ss_pred HHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEE
Q 014211 296 RIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIV 374 (429)
Q Consensus 296 ~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl 374 (429)
.+++|+| .|+||.|+++++||||++++++|+++|++.++++++|+|. +++++||+++..+.+++.++|+++..++++
T Consensus 781 ~iv~s~f-~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v- 858 (1001)
T 3haz_A 781 DVVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL- 858 (1001)
T ss_dssp HHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE-
T ss_pred HHHHHHH-hCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE-
Confidence 9999999 9999999999999999999999999999999999999996 689999999999999999999998766688
Q ss_pred eCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCC--HHHHHHHHHhh
Q 014211 375 YGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSI--VSSAHFKLKAC 428 (429)
Q Consensus 375 ~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~--~~eai~l~n~~ 428 (429)
+||..+..|+|++|||+.+ +++.+++||+||||++|++|++ ++|||+++|++
T Consensus 859 ~gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t 912 (1001)
T 3haz_A 859 HFAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERT 912 (1001)
T ss_dssp EEECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHT
T ss_pred eccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcC
Confidence 8888766799999999975 6788999999999999999996 79999999985
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-64 Score=508.01 Aligned_cols=339 Identities=16% Similarity=0.172 Sum_probs=291.8
Q ss_pred cCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHH
Q 014211 62 QRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALK 141 (429)
Q Consensus 62 ~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~ 141 (429)
+.++.+|+++++++|++||+.|+.+++++|.++|+++++.|++++++|++++++|+||+..+++..++..+++.+..
T Consensus 2 ~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~--- 78 (452)
T 3my7_A 2 PVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN--- 78 (452)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH---
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH---
Confidence 47899999999999999999999999999999999999999999999999999999999999875566666665521
Q ss_pred HHHhhcCCCcc-cccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHh
Q 014211 142 ELKYWTKPEKA-KTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE 220 (429)
Q Consensus 142 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~ 220 (429)
++..... .......+...+..++|+||+++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 79 ----~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~ 154 (452)
T 3my7_A 79 ----KYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVL 154 (452)
T ss_dssp ----HHTTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred ----HhhhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHH
Confidence 1111111 11111223456889999999999999999999999999999999999999999999999999888876
Q ss_pred ----hh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHH
Q 014211 221 ----DY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVT 293 (429)
Q Consensus 221 ----~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~a 293 (429)
++ +|+|++|+++| +.+.++.|++|+ ++.|.||||+..+ +.++.+++|+++|+|||||+||++|||++.|
T Consensus 155 ~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 155 DAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 56 99999999999 678999999997 9999999999854 4566788999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhc-CCE
Q 014211 294 TRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV-SDK 372 (429)
Q Consensus 294 a~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~ 372 (429)
++.+++++| +++||.|+++++||||+++|++|+++|+++ .||++++.+.+++.++++++.. +++
T Consensus 231 a~~iv~s~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKT-FDNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGG-GGGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHh-CCCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999 999999999999999999999999999875 4899999999999999986543 445
Q ss_pred EEeCCccC----CCCceEecEE-------EecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 373 IVYGGQRD----EKQLKIAPTI-------LLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 373 vl~gg~~~----~~g~~~~Ptv-------l~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+ .||... ..|+|++||+ +.++++++++++ |+||||++|++|+|++|||+++|++
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~ 360 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTM 360 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHH
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhc
Confidence 4 576542 3589999997 668888999875 8999999999999999999999986
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-62 Score=494.52 Aligned_cols=339 Identities=16% Similarity=0.184 Sum_probs=292.4
Q ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHH
Q 014211 63 RFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142 (429)
Q Consensus 63 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~ 142 (429)
.++.+|+++++++|++||+.|+.+++.+|.++|+++++.|++++++|++++++|+||+..+++..+...+++.+.+
T Consensus 8 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~---- 83 (464)
T 3k9d_A 8 LRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYN---- 83 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH----
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH----
Confidence 5678999999999999999999999999999999999999999999999999999999988865444444443332
Q ss_pred HHhhcCCCcc-cccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHH----
Q 014211 143 LKYWTKPEKA-KTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAK---- 217 (429)
Q Consensus 143 ~~~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~---- 217 (429)
|+..... .......+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++
T Consensus 84 ---~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 84 ---YIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp ---HHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred ---hhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 2222111 11111245667889999999999999999999999999999999999999999999999998665
Q ss_pred HHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecC-CCCcEEEcCCCCHHHH
Q 014211 218 LLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELG-GKSPAVVDSTINLQVT 293 (429)
Q Consensus 218 ~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~-G~~~~iV~~dadl~~a 293 (429)
++.++ +|+|+||+|+| +.+.++.|++|+ +|.|.||||+.. .+.++.+++|+ +|+| ||+|+||++|||++.|
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~A 235 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRA 235 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHH
Confidence 45777 99999999999 678999999997 999999999984 56667789999 7888 9999999999999999
Q ss_pred HHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHH-------hhhhCCCCC--CCCcccccCCHHHHHHHHhHH
Q 014211 294 TRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL-------KEFFGKNPM--ESKDLSRIVNPFHFARLASLL 364 (429)
Q Consensus 294 a~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~-------~~~~~g~~~--~~~~~gpl~~~~~~~~~~~~i 364 (429)
++.+++++| +|+||.|+++++||||+++|++|+++|+++. +.+++|+|. +++++||+++..+++++.+++
T Consensus 236 a~~i~~~~~-~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~ 314 (464)
T 3k9d_A 236 VKHILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLA 314 (464)
T ss_dssp HHHHHHHHT-GGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHT
T ss_pred HHHHHHHHh-cCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHh
Confidence 999999999 9999999999999999999999999999986 455677763 578999999999999999999
Q ss_pred Hhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHH----HHHHhh
Q 014211 365 DEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAH----FKLKAC 428 (429)
Q Consensus 365 ~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai----~l~n~~ 428 (429)
+.+. .|+++++||.. ++++++++. +|+||||++|++|+|.+||| +++|++
T Consensus 315 ~~a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~ 369 (464)
T 3k9d_A 315 GLTVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHE 369 (464)
T ss_dssp TCCCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHT
T ss_pred hhhhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcC
Confidence 9875 47799998863 456777755 89999999999999999997 688864
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-63 Score=497.25 Aligned_cols=333 Identities=21% Similarity=0.181 Sum_probs=262.1
Q ss_pred EeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-------CC
Q 014211 47 SCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDL-------SK 119 (429)
Q Consensus 47 ~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------Gk 119 (429)
-+.||+||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++++++|++++++|+ ||
T Consensus 10 ~~~~P~tg~~~~-~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk 88 (463)
T 2h5g_A 10 GVDLGTENLYFQ-SMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA 88 (463)
T ss_dssp --------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCH
T ss_pred CCcCCCCCCEEE-EecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCC
Confidence 456779999999 6779999999999999999999999999999999999999999999999999999999 79
Q ss_pred Cch----hhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHh
Q 014211 120 PPF----ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIA 195 (429)
Q Consensus 120 ~~~----~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALa 195 (429)
|+. ++. .|+..+++.++|++..++++.+.... ......+...++.++|+|||++|+||| |.... +++++||+
T Consensus 89 ~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~-~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 89 PLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLR-RTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEE-EEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred chhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccc-cccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 987 465 79999999999999988887765421 110012345688999999999999887 77766 89999999
Q ss_pred cCCeEEecCCCCChHHHHHHHHHHhhhc----CCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccC
Q 014211 196 AGNAVVLKPSEIAPATSSLLAKLLEDYV----DNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLT 270 (429)
Q Consensus 196 aGN~vV~kps~~~~~~~~~l~~~l~~al----P~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~ 270 (429)
+||+||+|||+.+|+++.+|++++.+++ |+|+||+|+|+.+.+..|+.|+ +|.|.||||+.+|+.|.+.++ ++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~ 242 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GI 242 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SS
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CC
Confidence 9999999999999999999999999986 5999999999666789999997 999999999999999999887 89
Q ss_pred ceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccc
Q 014211 271 PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSR 350 (429)
Q Consensus 271 ~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gp 350 (429)
|+++|+|||||+||++|||++.|++.+++++| .| ||.|+++++||||+++|+ ||
T Consensus 243 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~rvlV~~~i~d------------------------~p 296 (463)
T 2h5g_A 243 PVMGHSEGICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALETLLIHRDLLR------------------------TP 296 (463)
T ss_dssp CBCSCSCCCEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEEEEEEEGGGTT------------------------SH
T ss_pred CEEEecCCcceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCcEEEEeccccc------------------------hH
Confidence 99999999999999999999999999999999 98 999999999999999998 23
Q ss_pred cCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 351 IVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 351 l~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+ +++ +++++. .|++++.|+.....|+|+ +++|.+++||+||||++|++|+|+||||+++|++
T Consensus 297 ~-----~~~---~i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~ 359 (463)
T 2h5g_A 297 L-----FDQ---IIDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKY 359 (463)
T ss_dssp H-----HHH---HHHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHH
T ss_pred H-----HHH---HHHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcC
Confidence 2 223 355554 467887554433345543 5789999999999999999999999999999974
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-63 Score=497.09 Aligned_cols=325 Identities=19% Similarity=0.194 Sum_probs=271.3
Q ss_pred HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCc----hhhhHhhHHH-HHHHHHHHHHH
Q 014211 68 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFISEISM-TKSSCKLALKE 142 (429)
Q Consensus 68 dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~~ev~~-a~~~l~~~~~~ 142 (429)
.+++|+++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||. .++...|+.. +++.++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 688999999999999999999999999999999999999999999999999998 8875579999 99999999999
Q ss_pred HHhhcCCCcc--cc-ccc--CCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHH
Q 014211 143 LKYWTKPEKA--KT-SLT--TYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAK 217 (429)
Q Consensus 143 ~~~~~~~~~~--~~-~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~ 217 (429)
++++...... .. +.. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 9888732210 00 000 11345688999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHh----h----h-cCCCceEEecCCH-HHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcC
Q 014211 218 LLE----D----Y-VDNSAVRVVEGAV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286 (429)
Q Consensus 218 ~l~----~----a-lP~~~v~~v~~~~-~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~ 286 (429)
++. + + +|+|+||+|+ +. +.++.|+.|+ +|.|.||||+.+|+.|.+.+ ++|+++|+|||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 7 8 9999999999 65 5788899997 99999999999999999876 699999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhC---CCCCCCCcccccCCHHHHHHHHhH
Q 014211 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG---KNPMESKDLSRIVNPFHFARLASL 363 (429)
Q Consensus 287 dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~~~~~~~~gpl~~~~~~~~~~~~ 363 (429)
|||++.|++.+++++| +|+| .|+++++||||+++ ++|+++|+++++++++ |+|.+ .++
T Consensus 249 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKT-NYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------HHH
T ss_pred CCCHHHHHHHHHHHhc-CCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------hcc
Confidence 9999999999999999 9999 99999999999999 9999999999999986 65421 334
Q ss_pred -HHhhhcCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 364 -LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 364 -i~~a~~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++. ++++||. | ++||++ ++++|.+++||+||||++|++|+|++|||+++|++
T Consensus 310 ~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 364 (468)
T 1vlu_A 310 YFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTH 364 (468)
T ss_dssp HHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTS
T ss_pred cccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhC
Confidence 55543 3556765 4 689987 78899999999999999999999999999999975
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-59 Score=468.87 Aligned_cols=317 Identities=18% Similarity=0.220 Sum_probs=259.2
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCc----hhhhH-------hhHHHHHH
Q 014211 66 VEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFI-------SEISMTKS 134 (429)
Q Consensus 66 ~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~-------~ev~~a~~ 134 (429)
.+|+++|+++|++||+.|+.+++.+|.++|+++++.|+++.++|++++++|+||+. .++.. .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999985 35543 36888888
Q ss_pred HHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHH
Q 014211 135 SCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL 214 (429)
Q Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~ 214 (429)
.+++++.+.+. .+ ...+......+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.+
T Consensus 105 ~l~~~a~~~~~-~g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDP-IG-EMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCC-TT-CEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhccc-cC-ccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 88888776542 11 1111110123456789999999999999998 8 5889999999999999999999999999999
Q ss_pred HHHHH----hhh-cCCCceEEecC-CHH-HHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcC
Q 014211 215 LAKLL----EDY-VDNSAVRVVEG-AVA-ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286 (429)
Q Consensus 215 l~~~l----~~a-lP~~~v~~v~~-~~~-~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~ 286 (429)
+++++ .++ +|+|+||+++| +.+ .+..|..|+ +|.|.||||+.+++.+.+.+ ++|+++|+|||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 99997 567 99999999998 554 566777786 99999999999999998775 699999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhC---CCCCCCCcccccCCHHHHHHHHhH
Q 014211 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG---KNPMESKDLSRIVNPFHFARLASL 363 (429)
Q Consensus 287 dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~~~~~~~~gpl~~~~~~~~~~~~ 363 (429)
|||++.|++.+++++| +|+| .|++++|||||+++|++|+++|+++++++++ |+| ...++
T Consensus 258 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p----------------~~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKT-HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDA----------------DARAV 319 (444)
T ss_dssp TCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECH----------------HHHHH
T ss_pred CCCHHHHHHHHHHHhc-CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCH----------------HHHHH
Confidence 9999999999999999 9999 9999999999999999999999999999877 543 12456
Q ss_pred HHhhhcCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 364 i~~a~~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++.. | ++ ++++|.+++||+||||++|++|+|++|||+++|++
T Consensus 320 i~~a~~-------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~ 363 (444)
T 4ghk_A 320 LEAAGV-------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEY 363 (444)
T ss_dssp HHHTTC-------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHH
T ss_pred HHhccc-------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhC
Confidence 665431 2 11 34678999999999999999999999999999975
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-59 Score=465.61 Aligned_cols=316 Identities=17% Similarity=0.256 Sum_probs=268.9
Q ss_pred CHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCc----hhhhH-------hhHHHHH
Q 014211 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFI-------SEISMTK 133 (429)
Q Consensus 65 ~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~-------~ev~~a~ 133 (429)
..+++++++++|++||+.|+.+++.+|.++|++++++|++++++|++++++|+||+. .++.. .|+..++
T Consensus 12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~ 91 (427)
T 1o20_A 12 HMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI 91 (427)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHH
Confidence 346899999999999999999999999999999999999999999999999999985 55531 5899999
Q ss_pred HHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHH
Q 014211 134 SSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS 213 (429)
Q Consensus 134 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~ 213 (429)
+.+++++++.+. .+.. ........+...++.++|+|||++|+||| +...++++++||++||+||+|||+.+|+++.
T Consensus 92 ~~l~~~a~~~~~-~g~~-~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 92 KACETVIGLKDP-VGEV-IDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHSCCC-TTCE-EEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHhcccc-cCcc-ccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 999998876543 2211 11100012345688999999999999986 4688999999999999999999999999999
Q ss_pred HHHHHHh----hh-cCCCceEEecC-CHH-HHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEc
Q 014211 214 LLAKLLE----DY-VDNSAVRVVEG-AVA-ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285 (429)
Q Consensus 214 ~l~~~l~----~a-lP~~~v~~v~~-~~~-~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~ 285 (429)
++++++. ++ +|+|++|+|+| +.+ .++.|..|+ +|.|.||||+.+|+.|.+.+ ++|+++|+|||||+||+
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~ 244 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVD 244 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEe
Confidence 9999998 55 89999999998 544 567777786 99999999999999999887 59999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHH
Q 014211 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD 365 (429)
Q Consensus 286 ~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~ 365 (429)
+|||++.|++.+++++| .|+| .|+++++||||+++|++|+++|++++++++++
T Consensus 245 ~dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 245 ESADLKKAVPVIINAKT-QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp TTSCHHHHHHHHHHHHH-SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred CCCCHHHHHHHHHHHhc-cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 99999999999999999 9999 99999999999999999999999999987542
Q ss_pred hhhcCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 366 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 366 ~a~~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+.||... .+ |+ ||| ++.++.+++||+||||++|++|+|++|||+++|++
T Consensus 298 --------~~gg~~~-~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 346 (427)
T 1o20_A 298 --------VRGCEKT-RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKY 346 (427)
T ss_dssp --------EEECHHH-HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHH
T ss_pred --------eecChhh-hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhC
Confidence 1222210 12 33 885 34578899999999999999999999999999975
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 429 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-63 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-62 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 4e-59 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-57 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 7e-47 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-33 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 1e-30 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 2e-21 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 5e-10 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 7e-08 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 0.002 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 210 bits (536), Expect = 1e-63
Identities = 90/359 (25%), Positives = 151/359 (42%), Gaps = 12/359 (3%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
DV+KA ++ + +T R + +A++IE + + K
Sbjct: 52 DVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNA 111
Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
++ ++ + + W + +T SEP+GV I WN+P L
Sbjct: 112 YLMDLGGCIKTLRYCAG----WADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLL 167
Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLE 243
+ L + A++ GN VV+KP+E P T+ + L+++ V +V G A +
Sbjct: 168 MFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAIS 227
Query: 244 Q--KWDKILYTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAG 300
DK+ +TGS VG+++ AA K +L V LELGGKSP +V + +L G
Sbjct: 228 SHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQG 287
Query: 301 KWMANNGQACIGVDYIITTKDFAPKLID-SLRNELKEFFGKNPMESKDLSRIVNPFHFAR 359
+ + GQ CI + + + + S+ K G ++ + +
Sbjct: 288 VFY-HQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEK 346
Query: 360 LASLLDEDKVS-DKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
+ L++ K K+ GG K I PT+ DV DD I KEEIFGP+ I+
Sbjct: 347 ILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFK 405
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 207 bits (527), Expect = 3e-62
Identities = 86/358 (24%), Positives = 149/358 (41%), Gaps = 10/358 (2%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
DV+KA + + + R + +A++IE + D KP +
Sbjct: 52 DVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVIS 111
Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
++ ++ M + W KT + EP+GV I WN+P L
Sbjct: 112 YLVDLDMVLKCLRYYAG----WADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLL 167
Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALL- 242
+ + A+A GN VV+K +E P T+ +A L+++ V +V G A +
Sbjct: 168 MQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIA 227
Query: 243 -EQKWDKILYTGSPRVGRIVM-AAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAG 300
+ DK+ +TGS +GR++ AA + +L V LELGGKSP ++ S ++ +
Sbjct: 228 SHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFA 287
Query: 301 KWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARL 360
+ +C G + + + S+ G + V+ F ++
Sbjct: 288 LFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKI 347
Query: 361 ASLLDEDKVSD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
++ K K++ GG ++ I PT+ DV D TI KEEIFGP++ I+
Sbjct: 348 LGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 405
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 197 bits (501), Expect = 4e-59
Identities = 152/350 (43%), Positives = 220/350 (62%), Gaps = 8/350 (2%)
Query: 66 VEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125
+ +K R +NS KT+S ++R+ Q++++ MI E + I A+ DL K + ++
Sbjct: 2 ISDT---VKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSY 58
Query: 126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLL 185
E++ +KEL W + E + T I SEPLGVVLVI WNYPF L
Sbjct: 59 YEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNL 118
Query: 186 SLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQK 245
++ P++GA+AAGNAV+LKPSE++ + LLA L+ Y+D + VV+G V ET+ LL+++
Sbjct: 119 TIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPETTELLKER 178
Query: 246 WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMAN 305
+D I+YTGS VG+IVMAAAAKHLTPV LELGGKSP VD +L V RRI GK+M N
Sbjct: 179 FDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFM-N 237
Query: 306 NGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD 365
+GQ C+ DYI+ ++++ L+ LK+F+G++ +S+D RI+N HF R +
Sbjct: 238 SGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQR----VK 293
Query: 366 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTV 415
+ K+ +GG D+ IAPTIL+DV S +M+EEIFGP++PIV V
Sbjct: 294 GLIDNQKVAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCV 343
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 194 bits (493), Expect = 3e-57
Identities = 84/363 (23%), Positives = 154/363 (42%), Gaps = 20/363 (5%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
+V++A ++ + Y + R + A +I E+ + I + +
Sbjct: 59 EVDQA---VQSAQAAYLKWSKMAGIERSRVMLEAARIIRERRDNIAKLEVINN-----GK 110
Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
I+E + ++ + + A EPLGV I WNYPF+
Sbjct: 111 TITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFM 170
Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLE 243
++ A+A GNAVV KPS + P T +LA++ + V V VV+G S L
Sbjct: 171 IAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCH 230
Query: 244 QK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW 302
K+ +TGS G+ VM +AK + V LELGGKSP ++ L+ R + +
Sbjct: 231 HPNVAKVSFTGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF 290
Query: 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFF-GKNPMESKDLSRIVNPFHFARLA 361
+ GQ C + ++ P+ ++ + K G + + +++ ++
Sbjct: 291 L-TQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVL 349
Query: 362 SLLDEDKVSD-KIVYGGQR-------DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413
+ + K +++ GG+ + ++P +L + DD T +KEEIFGP++ ++
Sbjct: 350 GFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVL 409
Query: 414 TVS 416
Sbjct: 410 PFD 412
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 165 bits (419), Expect = 7e-47
Identities = 88/358 (24%), Positives = 152/358 (42%), Gaps = 13/358 (3%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
V+ A ++ + + + R + +A++IEE + E ++ KP
Sbjct: 40 QVDAA---VRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSA 96
Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
F EI + ++ I +PLGVV I+ WNYP +
Sbjct: 97 FNDEIPAIVDVFR---FFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLM 153
Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALL-- 242
++ + A+AAGN VVLKPSEI P T+ LA+L +D V ++ G L
Sbjct: 154 MAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTG 213
Query: 243 EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW 302
K + TGS G +++ A + +ELGGK+P +V +++ + +
Sbjct: 214 HPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY 273
Query: 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKE-FFGKNPMESKDLSRIVNPFHFARLA 361
N GQ C I K L++ L + G ES +L + + H R+
Sbjct: 274 Y-NAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVG 332
Query: 362 SLLDEDKVSD--KIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
++E K + K++ GG++ + APT+L D I+++E+FGP++ +
Sbjct: 333 KAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFD 390
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 129 bits (325), Expect = 1e-33
Identities = 80/356 (22%), Positives = 153/356 (42%), Gaps = 11/356 (3%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
+V+ + + + SY R + + +A+++ +E+I + K+++K
Sbjct: 40 EVDYV---YASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA 96
Query: 125 FISEISMTKS-SCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPF 183
+ + + E + A + EP+G+VL IS +NYP
Sbjct: 97 VSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 156
Query: 184 LLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED-YVDNSAVRVVEGAVAETSALL 242
L+ + A+ AGN + KP + LLA+ + + + G +E +
Sbjct: 157 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYI 216
Query: 243 --EQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAG 300
Q + I +TGS +G + A + P++LELGGK A+V +L++T + IIAG
Sbjct: 217 VEHQAVNFINFTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAG 274
Query: 301 KWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARL 360
+ +GQ C V ++ + A +L++ +R ++ NP + D++ +++ +
Sbjct: 275 AFG-YSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYV 333
Query: 361 ASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
L D + + I P + V D + EE FGP+LPI+ V+
Sbjct: 334 EG-LINDANDKGATALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVT 388
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 121 bits (303), Expect = 1e-30
Identities = 79/364 (21%), Positives = 148/364 (40%), Gaps = 21/364 (5%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP--F 122
+ E A ++ + + K E R + A ++ ++ E+ + ++ K
Sbjct: 75 EAEAA---LEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEA 131
Query: 123 ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYP 182
++E A +Y PLG +VI+ WN+P
Sbjct: 132 SADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNE-----SFYVPLGAGVVIAPWNFP 186
Query: 183 FLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED-YVDNSAVRVVEGAVAETSAL 241
+ ++G +A GN V+ KP+E A + + ++ + V + G E A
Sbjct: 187 VAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAY 246
Query: 242 LEQ--KWDKILYTGSPRVGRIVMAAA------AKHLTPVILELGGKSPAVVDSTINLQVT 293
L + + I +TGS VG + AA +E GGK+ +VD T + +
Sbjct: 247 LVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLA 306
Query: 294 TRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVN 353
++ + GQ C +I T+ +++ + + E+ DL +V+
Sbjct: 307 AEGVVVSAYG-FQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVS 365
Query: 354 PFHFARLASLLDEDKVSDKIVYGGQRDEKQ-LKIAPTILLDVPDDSTIMKEEIFGPLLPI 412
++ S ++ K ++V GG+R E + IAPT+ +VP + I +EEIFGP+L +
Sbjct: 366 AEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSV 425
Query: 413 VTVS 416
+ V
Sbjct: 426 IRVK 429
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 94.3 bits (233), Expect = 2e-21
Identities = 67/356 (18%), Positives = 135/356 (37%), Gaps = 7/356 (1%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
+VE+ ++ + S + R++ ++ A++IE + E + + KP
Sbjct: 53 EVERTLDVLFK--RGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAA 110
Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFL 184
+ L K + T + + EPLGVV I+ +NYP
Sbjct: 111 VGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLF 170
Query: 185 LSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQ 244
+++ + + GNAVV+KPS P +++ K L D + + + +
Sbjct: 171 DAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVA 230
Query: 245 KWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMA 304
+ + + ++ELGG PA+V +L + +I G +
Sbjct: 231 DDRVAAVSFTGSTEVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYS- 289
Query: 305 NNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASL 363
GQ C + ++ + KL++ + L +P + D+ +++P + +
Sbjct: 290 YAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAA 349
Query: 364 LDEDKVSDKIVYGGQRDEKQLKIAPTILL---DVPDDSTIMKEEIFGPLLPIVTVS 416
+++ V G R + PT++ D D + K E+F P+ V V
Sbjct: 350 IEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVK 405
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 58.9 bits (141), Expect = 5e-10
Identities = 39/276 (14%), Positives = 97/276 (35%), Gaps = 17/276 (6%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP--- 121
++ + A K++R ++ + + + I+ IA ++E+ +EI+EA D+ K
Sbjct: 2 ELLEKA---KKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERG 58
Query: 122 -FETFISEISMTKSSCKLALKELKYWT---KPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177
E+ + +++ +K + P I + + +
Sbjct: 59 VKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGI 118
Query: 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPAT----SSLLAKLLEDYVDNSAVRVVEG 233
+ ++++ I A+ +GN ++L+ A + S + + L++ +
Sbjct: 119 IYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIE 178
Query: 234 AVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVT 293
+ L + + L PR G +++ + T +LE G + +
Sbjct: 179 NTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKK 238
Query: 294 TRRIIAGKWMANNGQACIGVDYIITT---KDFAPKL 326
+I G ++ K+F P +
Sbjct: 239 AVPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVI 274
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.1 bits (124), Expect = 7e-08
Identities = 43/350 (12%), Positives = 91/350 (26%), Gaps = 45/350 (12%)
Query: 84 KTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDL----SKPPFETFISEISMTKS----S 135
KT S E R + I + ++ I EA DL ++ + + + K
Sbjct: 20 KTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEV 79
Query: 136 CKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIA 195
+K++ P + V +++ + + + +I
Sbjct: 80 MLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIK 139
Query: 196 AGNAVVLKPSEIAPATSSLLAKLLEDY-------VDNSAVRVVEGAVAETSALLEQKWDK 248
+GNA +LK + + T +AK++ D V + + L + D+
Sbjct: 140 SGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQ-DE 198
Query: 249 ILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQ 308
+ PR ++ +L ++ + +RI
Sbjct: 199 YIDLVVPRGSNALVRKIKDTTKIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAG 258
Query: 309 ACIGVDYIITTK--DFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDE 366
+I K + L +
Sbjct: 259 CNAMETLLINPKFSKWWEVLENLTLEGGVTIHA--------------------------- 291
Query: 367 DKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVS 416
K + + +L A D+ +E L V+
Sbjct: 292 TKDLKTAYFDKLNELGKLTEAIQCKTVDADEEQDFDKEFLSLDLAAKFVT 341
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 38.2 bits (87), Expect = 0.002
Identities = 54/364 (14%), Positives = 117/364 (32%), Gaps = 21/364 (5%)
Query: 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124
+V +AA+ ++ ++ R+ + + R S +++IA+ +E + ++II H + + P
Sbjct: 27 EVNQAATAAAKVARDF--RRLNNSK-RASLLRTIASELEARSDDIIARAHLETALPEVRL 83
Query: 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAE-----IISEPLGVVLVISTW 179
EI+ T + +L + + + + + LG V V
Sbjct: 84 TG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGAS 142
Query: 180 NYPF--LLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVE----- 232
N+P + A+AAG V++K P TS ++A+ +E + +
Sbjct: 143 NFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQ 202
Query: 233 --GAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINL 290
+ + + + +TGS GR + A + P+ + +
Sbjct: 203 GNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGELGAINPTFIFPSA 262
Query: 291 QVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSR 350
+ + E + + S L+
Sbjct: 263 MRAKADLADQFVASMTMGC-GQFCTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTP 321
Query: 351 IVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLL 410
+ + +++ S +D + + +EEIFGP
Sbjct: 322 GIRDSYQSQVVSRGSDDGIDVTFSQ--AESPCVASALFVTSSENWRKHPAWEEEIFGPQS 379
Query: 411 PIVT 414
IV
Sbjct: 380 LIVV 383
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 429 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=2e-83 Score=651.07 Aligned_cols=397 Identities=24% Similarity=0.347 Sum_probs=368.0
Q ss_pred ccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHH
Q 014211 17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMS 93 (429)
Q Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~---~w~~~~~~~R~~ 93 (429)
-+++|+|||| +|+++.+|++|+++|| +||+.++ .++.++.+|++.||++|++||+ .|+.++.++|.+
T Consensus 11 ~~~~~~yI~G-~w~~~~s~~~~~v~nP--------~t~e~i~-~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~ 80 (494)
T d1bxsa_ 11 FKYTKIFINN-EWHSSVSGKKFPVFNP--------ATEEKLC-EVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGR 80 (494)
T ss_dssp CCCCSEEETT-EEECCTTCCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHH
T ss_pred cCcCCEEECC-EecCCCCCCEEEeeCC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHH
Confidence 4577999999 9999999877777776 9999998 6779999999999999999996 699999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEE
Q 014211 94 QIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV 173 (429)
Q Consensus 94 ~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 173 (429)
+|++++++|++++++|++++++|+|||..++...|+..+++.+++++...+++.+... + ...+...++.++|+|||
T Consensus 81 iL~kia~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~-~---~~~~~~~~~~~~P~GVv 156 (494)
T d1bxsa_ 81 LLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTI-P---MDGNFFTYTRSEPVGVC 156 (494)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEE-C---CSSSEEEEEEEEECCEE
T ss_pred HHHHHHHHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceee-c---CCCCceeEEEEccEEEE
Confidence 9999999999999999999999999999987667899999999999998877544332 1 12345678899999999
Q ss_pred EEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEE
Q 014211 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKIL 250 (429)
Q Consensus 174 ~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ 250 (429)
++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ ||+|++|+|+|+ .+.++.|++|+ ++.|.
T Consensus 157 ~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~ 236 (494)
T d1bxsa_ 157 GQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVA 236 (494)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEE
T ss_pred EEEeCccchhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEE
Confidence 9999999999999999999999999999999999999999999999999 999999999994 56789999997 99999
Q ss_pred EeCChHHHHHHHHHHhc-ccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHH
Q 014211 251 YTGSPRVGRIVMAAAAK-HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDS 329 (429)
Q Consensus 251 ftGs~~~~~~i~~~~~~-~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~ 329 (429)
||||+.+|+.|.+.++. +++|+++|+|||||+||++|||++.+++.+++++| +++||.|+++++||||+++|++|+++
T Consensus 237 fTGS~~~g~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~~~d~f~~~ 315 (494)
T d1bxsa_ 237 FTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRR 315 (494)
T ss_dssp EESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHh-cCCCcccccceEEecccchhHHHHHH
Confidence 99999999999998885 68999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCcc
Q 014211 330 LRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIF 406 (429)
Q Consensus 330 l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~f 406 (429)
|+++++++++|+|. +++++||++++.+++++.++|++++ .|+++++||.. +..|+|++|||+.++++++.+++||+|
T Consensus 316 l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~F 395 (494)
T d1bxsa_ 316 SVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIF 395 (494)
T ss_dssp HHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCC
T ss_pred HHhhhhheeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhcccc
Confidence 99999999999996 6899999999999999999999986 57899998875 557899999999999999999999999
Q ss_pred ccceeeEecCCHHHHHHHHHhh
Q 014211 407 GPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 407 gPv~~v~~~~~~~eai~l~n~~ 428 (429)
|||++|++|+|.+|||+++|++
T Consensus 396 GPvl~v~~~~~~~eai~~~n~~ 417 (494)
T d1bxsa_ 396 GPVQQIMKFKSLDDVIKRANNT 417 (494)
T ss_dssp SSEEEEEEECCHHHHHHHHHCS
T ss_pred CceEEEEEECCHHHHHHHHhCC
Confidence 9999999999999999999975
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=7.1e-83 Score=646.63 Aligned_cols=396 Identities=24% Similarity=0.352 Sum_probs=367.0
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHH
Q 014211 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMSQ 94 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~---~w~~~~~~~R~~~ 94 (429)
..+|+|||| +|+++.++++|+++|| +||++++ .++.++.+|+++||++|++||+ .|+++++.+|.++
T Consensus 12 ~~~~~~I~G-~w~~~~~~~~~~v~nP--------~tg~~i~-~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~i 81 (494)
T d1o04a_ 12 FCNQIFINN-EWHDAVSRKTFPTVNP--------STGEVIC-QVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRL 81 (494)
T ss_dssp CCCSEEETT-EEECCTTCCEEEEEET--------TTTEEEE-EEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHH
T ss_pred ccCCeEECC-EecCCCCCCEEEeeCC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHH
Confidence 456999999 9999999877777666 9999998 6779999999999999999995 6999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEE
Q 014211 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVL 174 (429)
Q Consensus 95 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 174 (429)
|+++++.|++++++|++++++|+|||..++...|+..+++.+++++...+++.+.... ...+...++.++|+|||+
T Consensus 82 L~~~a~~l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~ 157 (494)
T d1o04a_ 82 LNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIP----IDGDFFSYTRHEPVGVCG 157 (494)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEEC----CSSSEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceec----cCCCceeEEEEecccEEE
Confidence 9999999999999999999999999999987679999999999999988775543321 123456788999999999
Q ss_pred EEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEE
Q 014211 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILY 251 (429)
Q Consensus 175 ~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~f 251 (429)
+|+|||||+...++++++||++||+||+|||+.+|.++.++.+++.++ +|+|++|+|+|+ .+.++.|++|+ ++.|.|
T Consensus 158 ~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~f 237 (494)
T d1o04a_ 158 QIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAF 237 (494)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEE
T ss_pred EECCcccHHHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999999 999999999994 66899999997 999999
Q ss_pred eCChHHHHHHHHHHh-cccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHH
Q 014211 252 TGSPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (429)
Q Consensus 252 tGs~~~~~~i~~~~~-~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 330 (429)
|||+++|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++| +++||.|++++++|||++++++|++++
T Consensus 238 TGS~~~g~~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~-~~~GQ~C~a~~~v~v~~~i~d~f~~~l 316 (494)
T d1o04a_ 238 TGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERS 316 (494)
T ss_dssp ESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhcc-ccCcccccccccccccchhhHHHHHHH
Confidence 999999999998876 679999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCccc
Q 014211 331 RNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFG 407 (429)
Q Consensus 331 ~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 407 (429)
+++++++++|+|. +.+++||++++.+++++.+++++++ .|+++++||.. .+.|+|++|||+.++++++.+++||+||
T Consensus 317 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FG 396 (494)
T d1o04a_ 317 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG 396 (494)
T ss_dssp HHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCS
T ss_pred HHHhhheeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccC
Confidence 9999999999996 5789999999999999999999986 47899999976 4568999999999999999999999999
Q ss_pred cceeeEecCCHHHHHHHHHhh
Q 014211 408 PLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 408 Pv~~v~~~~~~~eai~l~n~~ 428 (429)
||++|++|+|.+|||+++|++
T Consensus 397 Pvl~v~~~~~~~eai~~an~~ 417 (494)
T d1o04a_ 397 PVMQILKFKTIEEVVGRANNS 417 (494)
T ss_dssp SEEEEEEECCHHHHHHHHHCS
T ss_pred ceEEEEEeCCHHHHHHHHhCC
Confidence 999999999999999999985
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=1.3e-81 Score=637.82 Aligned_cols=397 Identities=23% Similarity=0.329 Sum_probs=369.9
Q ss_pred cccccceeeecceeeccCCcccc-ccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHH
Q 014211 16 AACLNKSFIYNYTYRKNQTHISF-PYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQ 94 (429)
Q Consensus 16 ~~~~~~~~i~g~~~~~~~~~~~~-~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~ 94 (429)
.-++..+|||| +|+++.+|+++ +++|| +||++++ .++.++.+|+++||++|++||+.|++++..+|.++
T Consensus 16 ~~~~~~n~I~G-~~v~~~~g~~~~~V~nP--------~tge~i~-~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~i 85 (503)
T d1a4sa_ 16 VVTDDLNYWGG-RRIKSKDGATTEPVFEP--------ATGRVLC-QMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRV 85 (503)
T ss_dssp CCCSCCEEETT-EEECCCTTCCCEEEECT--------TTCCEEE-EECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred eecCCCeEECC-EEeCCCCCCeeeeeecC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHH
Confidence 34566789999 99999888665 36666 9999998 67799999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEE
Q 014211 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVL 174 (429)
Q Consensus 95 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 174 (429)
|++++++|++++++|++++++|+|||+.+++ .|+..+++.+++++...++..+.... ...+...++.++|+||++
T Consensus 86 L~~~a~~L~~~~eela~~~~~etGkp~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~ 160 (503)
T d1a4sa_ 86 MLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQ----LPGGAFAYTRREPLGVCA 160 (503)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEE----CGGGCEEEEEEEECSEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHhhhhcchhhh-hhhhhhhhcccccccccccccccccc----cCCCcccccccccceeee
Confidence 9999999999999999999999999999997 69999999999999988775543321 123556899999999999
Q ss_pred EEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEe
Q 014211 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYT 252 (429)
Q Consensus 175 ~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ft 252 (429)
+|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+|+.+.+..|++|+ ++.|.||
T Consensus 161 ~I~p~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~fT 240 (503)
T d1a4sa_ 161 GILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSFT 240 (503)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEEE
T ss_pred cccCCCChHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEEe
Confidence 999999999999999999999999999999999999999999999999 99999999999889999999997 9999999
Q ss_pred CChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHH
Q 014211 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (429)
Q Consensus 253 Gs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~ 332 (429)
||+++|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .++||.|++++|+|||++++++|++++.+
T Consensus 241 GS~~~G~~i~~~aa~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~-~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~ 319 (503)
T d1a4sa_ 241 GSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVVK 319 (503)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchh-ccCCCccccCcceEEEechhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-------CCCceEecEEEecCCCCCCcccc
Q 014211 333 ELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-------EKQLKIAPTILLDVPDDSTIMKE 403 (429)
Q Consensus 333 ~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-------~~g~~~~Ptvl~~~~~~~~~~~~ 403 (429)
.++++++|+|. +.+++||++++.+++++.++++++. .|+++++||... ..|+|++|||+.+++++|++++|
T Consensus 320 ~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~ 399 (503)
T d1a4sa_ 320 RTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKE 399 (503)
T ss_dssp HHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHS
T ss_pred hhhhEeeccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhc
Confidence 99999999996 5889999999999999999999986 588999999742 36899999999999999999999
Q ss_pred CccccceeeEecCCHHHHHHHHHhh
Q 014211 404 EIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 404 E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
|+||||++|++|+|.+|||+++|++
T Consensus 400 E~FgPvl~v~~~~~~~eai~~an~~ 424 (503)
T d1a4sa_ 400 EIFGPVMSVLPFDTEEEVLQRANNT 424 (503)
T ss_dssp CCCSSEEEEEEECCHHHHHHHHHCS
T ss_pred cccCceEEEEEcCCHHHHHHHHhCC
Confidence 9999999999999999999999975
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.3e-80 Score=633.29 Aligned_cols=407 Identities=20% Similarity=0.306 Sum_probs=371.1
Q ss_pred hhhhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCC
Q 014211 7 RAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTK 86 (429)
Q Consensus 7 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~ 86 (429)
+++.++....++++++|||| +|+.+.+ +++++|| |.||++++ .++.++.+|+++||++|++||+.|+++
T Consensus 25 ~~~~~~~~~~~~~~~l~I~G-~~v~s~~--~~~~~nP-------~~tge~i~-~~~~a~~~dv~~Av~aA~~A~~~W~~~ 93 (516)
T d1uzba_ 25 EALRRVREEFGRHYPLYIGG-EWVDTKE--RMVSLNP-------SAPSEVVG-TTAKAGKAEAEAALEAAWKAFKTWKDW 93 (516)
T ss_dssp HHHHHHHHTTTEEECEEETT-EEECCSS--EEEEEET-------TEEEEEEE-EEECCCHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhcCCCCCeEEcC-EEECCCC--CeEEeCC-------CCCCeEEE-EEcCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 36777888888999999999 9998633 3444444 24788887 677999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEE
Q 014211 87 SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEII 166 (429)
Q Consensus 87 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (429)
|..+|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.+++++.....+.+...... ...+...+..
T Consensus 94 s~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~ 170 (516)
T d1uzba_ 94 PQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVV--PYPGEDNESF 170 (516)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCC--CCTTEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc-hhHHHHHHHHHHHHHHHHhhhhcccccc--cccccceeEE
Confidence 999999999999999999999999999999999999996 7999999999999998887655433221 1234556788
Q ss_pred eecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhc
Q 014211 167 SEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQ 244 (429)
Q Consensus 167 ~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~ 244 (429)
++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++.+++.++ +|+|++|+|+| +.+.+..|++|
T Consensus 171 ~~P~Gvv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~h 250 (516)
T d1uzba_ 171 YVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEH 250 (516)
T ss_dssp EEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTC
T ss_pred eeccCccccccccccccccccccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999 56789999999
Q ss_pred C-CCEEEEeCChHHHHHHHHHHh------cccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEE
Q 014211 245 K-WDKILYTGSPRVGRIVMAAAA------KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317 (429)
Q Consensus 245 ~-v~~v~ftGs~~~~~~i~~~~~------~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~ 317 (429)
+ ++.|.||||..+|+.|.+.++ .+++|+++|+|||||+||++|||++.+++.+++++| .++||.|++++++|
T Consensus 251 p~v~~I~FTGs~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~-~~~GQ~C~a~~ri~ 329 (516)
T d1uzba_ 251 PRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAY-GFQGQKCSAASRLI 329 (516)
T ss_dssp TTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEE
T ss_pred CCcCEEecccchhHHHHHHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhc-ccCCCcccccCccc
Confidence 7 999999999999999999887 568999999999999999999999999999999999 99999999999999
Q ss_pred EeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCcc-CCCCceEecEEEecCCC
Q 014211 318 TTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQR-DEKQLKIAPTILLDVPD 396 (429)
Q Consensus 318 V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~ 396 (429)
||++++++|++++.++++++++|+.++++++||+++..+++++.+++++++..+.+++||.. +..|+|++|||+.++++
T Consensus 330 v~~~i~d~~~~~~~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~g~~~~~~g~~~~Ptvl~~v~~ 409 (516)
T d1uzba_ 330 LTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPP 409 (516)
T ss_dssp EEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCT
T ss_pred cccccccchhhHHHHHHHhcccCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEECCCcCCCCCceECCEEEecCCC
Confidence 99999999999999999999999666788999999999999999999999877777777764 56799999999999999
Q ss_pred CCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 397 DSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 397 ~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++.+++||+||||++|++|+|.+|||+++|++
T Consensus 410 ~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~ 441 (516)
T d1uzba_ 410 KARIAQEEIFGPVLSVIRVKDFAEALEVANDT 441 (516)
T ss_dssp TSGGGTSCCCSSEEEEEEESSHHHHHHHHHCS
T ss_pred CchhhcCCCcCceEEEEEeCCHHHHHHHHHCC
Confidence 99999999999999999999999999999986
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=9.2e-81 Score=628.77 Aligned_cols=395 Identities=23% Similarity=0.340 Sum_probs=356.6
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 014211 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 98 (429)
++|+|||| +|+++ +|++++++|| +||+.++ .++.++.+|+++|+++|++||+.|+++|..+|.++|+++
T Consensus 2 ~~~l~I~G-~~v~~-~g~~~~v~nP--------~tg~~i~-~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~ 70 (474)
T d1wnda_ 2 QHKLLING-ELVSG-EGEKQPVYNP--------ATGDVLL-EIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKL 70 (474)
T ss_dssp CCCEEETT-EEECC-CSCEEEEEET--------TTTEEEE-EEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred CCccEECC-eEeCC-CCCeeeeECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 57899999 99988 5556666666 8999998 677999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcC
Q 014211 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 178 (429)
+++|++++++|+++++.|+|||+.++...++..+...+++++.......... ......+...++.++|+|||++|+|
T Consensus 71 a~~l~~~~~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~P~GVV~~I~p 147 (474)
T d1wnda_ 71 ADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLA---AGEYLEGHTSMIRRDPLGVVASIAP 147 (474)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEEC---BEEEETTEEEEEEEEECSEEEEECC
T ss_pred HHHHHhCHHHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccc---cccccCCcceEEEEecccceEEEee
Confidence 9999999999999999999999999965566666666666555443322111 1112345667899999999999999
Q ss_pred CchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCChH
Q 014211 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSPR 256 (429)
Q Consensus 179 ~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~~ 256 (429)
||||+...++++++||++||+||+|||+.+|+++..+++++++++|+|++|+|+|+ .+.++.|++|+ ++.|.||||++
T Consensus 148 ~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v~fTGS~~ 227 (474)
T d1wnda_ 148 WNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIA 227 (474)
T ss_dssp SSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHH
T ss_pred cchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHHhCCCCcEEEEeCCcHHHHHHHHhCCCcCEEEeeCCHH
Confidence 99999999999999999999999999999999999999999988999999999994 56899999997 99999999999
Q ss_pred HHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhh
Q 014211 257 VGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKE 336 (429)
Q Consensus 257 ~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~ 336 (429)
+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +++||.|++++++|||+++|++|+++|++++++
T Consensus 228 ~G~~i~~~a~~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~-~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~ 306 (474)
T d1wnda_ 228 TGEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVAT 306 (474)
T ss_dssp HHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhcCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcc-cCCCcccccccccccccccchhhhhhhHHHHHh
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred hhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhc-CC-EEEeCCcc-CCCCceEecEEEecCCCCCCccccCccccceee
Q 014211 337 FFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKV-SD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (429)
Q Consensus 337 ~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~~-~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v 412 (429)
++.|+|. +++++||++++.+.+++.+++++++. |+ .++.||.. ...|+|++|||+.++++++.+++||+||||++|
T Consensus 307 l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v 386 (474)
T d1wnda_ 307 LKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSV 386 (474)
T ss_dssp CCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEE
T ss_pred hccCCcCCCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecccCCeEEE
Confidence 9999996 57899999999999999999999865 54 56667665 346899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHhh
Q 014211 413 VTVSIVSSAHFKLKAC 428 (429)
Q Consensus 413 ~~~~~~~eai~l~n~~ 428 (429)
++|+|.+|||+++|++
T Consensus 387 ~~~~~~deai~~an~~ 402 (474)
T d1wnda_ 387 TPFDNEEQVVNWANDS 402 (474)
T ss_dssp EEECCHHHHHHHHHSS
T ss_pred EEeCCHHHHHHHHhCC
Confidence 9999999999999975
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=1.3e-72 Score=572.45 Aligned_cols=393 Identities=21% Similarity=0.327 Sum_probs=351.6
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh-hhcCCCHHHHHHHHHH
Q 014211 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN-SRKTKSYEWRMSQIQS 97 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~-~w~~~~~~~R~~~L~~ 97 (429)
.+++|||| +|+. +|.+++++|| .||++++ .++.++.+|+++|+++|++|++ .|+++|..+|+++|++
T Consensus 16 ~~~~~I~G-~~~~--sg~~~~v~~P--------~t~~~i~-~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~ 83 (499)
T d1ky8a_ 16 VYPSYLAG-EWGG--SGQEIEVKSP--------IDLATIA-KVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRK 83 (499)
T ss_dssp EECEECSS-SEEC--CSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHH
T ss_pred CCCCEECC-eECC--CCCeEEeeCC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHH
Confidence 48999999 9995 4555666555 8999998 6779999999999999999887 7999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCccc-ccccCCCCcceEEeecceEEEEE
Q 014211 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAK-TSLTTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~Gvv~~i 176 (429)
+++.|++++++|++++++|+|||..++. +|+.++++.++|++..++++.+..... ......+...++.++|+|||++|
T Consensus 84 ~a~~l~~~~~~la~~~~~etGk~~~~a~-~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I 162 (499)
T d1ky8a_ 84 AADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAI 162 (499)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHh-hhhhcccccccchhhhhhhhhhceeccccccccccccceeeeecccccccc
Confidence 9999999999999999999999999996 799999999999999887765433221 11122345568899999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCC
Q 014211 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGS 254 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs 254 (429)
+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|.++++++.++.+.+..|+.|+ ++.+.||||
T Consensus 163 ~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs 242 (499)
T d1ky8a_ 163 TPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGS 242 (499)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCGGGGHHHHHCTTCCEEEEESC
T ss_pred ccccccchhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCChHHHHHHhhccceeEEEeecc
Confidence 9999999999999999999999999999999999999999999999 99999999998888899999996 999999999
Q ss_pred hHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHH
Q 014211 255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334 (429)
Q Consensus 255 ~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~ 334 (429)
...++.+.+.++ .+|+++|+|||||+||++|||++.+++.+++++| +++||.|++++++|||++++++|+++|++++
T Consensus 243 ~~~g~~i~~~~~--~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~-~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~ 319 (499)
T d1ky8a_ 243 TEVGERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 319 (499)
T ss_dssp HHHHHHHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHH
T ss_pred cccceEEeeccc--ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhh-ccCcccccccccccccchhHHHHHHHHHHHH
Confidence 999999998765 4799999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred hhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEE---ecCCCCCCccccCccccc
Q 014211 335 KEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTIL---LDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 335 ~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl---~~~~~~~~~~~~E~fgPv 409 (429)
+++++|+|. +++++||+++..+.+++.++++++. .|++++.||...... +..++++ .+++++|.+++||+||||
T Consensus 320 ~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~eE~FGPv 398 (499)
T d1ky8a_ 320 SSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT-YVQPTLVEAPADRVKDMVLYKREVFAPV 398 (499)
T ss_dssp HTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEETT-EECCEEEECCHHHHTTSHHHHSCCCSSE
T ss_pred HhCccCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccccc-ccccccccccccCCCCChhhhccccCce
Confidence 999999996 5789999999999999999999986 478999988764333 3333333 345679999999999999
Q ss_pred eeeEecCCHHHHHHHHHhh
Q 014211 410 LPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~~~eai~l~n~~ 428 (429)
++|++|+|.+||++++|.+
T Consensus 399 l~v~~~~~~~eai~~~n~~ 417 (499)
T d1ky8a_ 399 ASAVEVKDLDQAIELANGR 417 (499)
T ss_dssp EEEEEESSHHHHHHHHHTS
T ss_pred EEEEEcCCHHHHHHHHhCC
Confidence 9999999999999999975
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=4.3e-71 Score=559.41 Aligned_cols=393 Identities=22% Similarity=0.336 Sum_probs=353.4
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 014211 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 97 (429)
+.+|+|||| +|+.+ +.+++++ ||+||+.++ .++.++.+|+++|+++|++||+.|+++|.++|.++|++
T Consensus 2 k~~~n~I~G-~~~~~--~~~~~v~--------~P~tg~~i~-~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~ 69 (474)
T d1euha_ 2 KQYKNYVNG-EWKLS--ENEIKIY--------EPASGAELG-SVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHK 69 (474)
T ss_dssp CBCCEEETT-EEECC--SSEEEEE--------CTTTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred ccccceecC-eecCC--CCCEEEe--------CCCCCCEEE-EEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHH
Confidence 678999999 99876 3345454 559999998 77799999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCccc--ccccCCCCcceEEeecceEEEE
Q 014211 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAK--TSLTTYPSSAEIISEPLGVVLV 175 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~P~Gvv~~ 175 (429)
+++.|++++++|++++++|+||+..++. .|+...+..++++.............. ......+...++.++|+|||++
T Consensus 70 ~a~~L~~~~~~la~~~~~e~Gk~~~~a~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~ 148 (474)
T d1euha_ 70 VADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLA 148 (474)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEE
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCcchhc-cccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEE
Confidence 9999999999999999999999999996 699999999999988776543322211 1122334556789999999999
Q ss_pred EcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEe
Q 014211 176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYT 252 (429)
Q Consensus 176 i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ft 252 (429)
|+|||||+...++.+++||++||+||+|||+.+|.++.++++++.++ +|+|++|+++|+ .+.++.|++|+ ++.|.||
T Consensus 149 I~p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~~v~~v~ft 228 (474)
T d1euha_ 149 ISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFT 228 (474)
T ss_dssp ECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred eccccccchhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCCCccEEEec
Confidence 99999999999999999999999999999999999999999999999 999999999996 66889999997 9999999
Q ss_pred CChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHH
Q 014211 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (429)
Q Consensus 253 Gs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~ 332 (429)
||+++++.+.+.++ .+|+++|+||+||+||++|||++.+++.+++++| +++||.|+++++||||++++++|+++++.
T Consensus 229 Gs~~~~~~i~~~a~--~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~-~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~ 305 (474)
T d1euha_ 229 GSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKIRE 305 (474)
T ss_dssp SCHHHHHHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHHH
T ss_pred Cccccccchhhhcc--cceEEEecCCcceEEEECCCchhhHHHHHHHHHh-hCCCCccccccccchhhhhhhhhhHhhhh
Confidence 99999999998865 5899999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhc-CCEEEeCCccCCCCceEecEEEecCCCCCCccccCcccccee
Q 014211 333 ELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (429)
Q Consensus 333 ~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~ 411 (429)
+...++.+++.+..+++|++.....+++.+.+..+.. +...+.++. ..|+|++|||+.+++++|.+++||+||||++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~ 383 (474)
T d1euha_ 306 KVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIK--REGNLICPILFDKVTTDMRLAWEEPFGPVLP 383 (474)
T ss_dssp HHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC--EETTEECCEEEESCCTTSGGGTSCCCSSEEE
T ss_pred hhhhccccCcccccccccccchHHHHHHHHHHHhhhcccccccccCC--CCCCCcCCEEEecCCCcchhhhcccCCcEEE
Confidence 9999999988877789999999999999999987754 455544333 3689999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHhh
Q 014211 412 IVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 412 v~~~~~~~eai~l~n~~ 428 (429)
|++|+|.+|||+++|++
T Consensus 384 v~~~~~~deai~~~n~~ 400 (474)
T d1euha_ 384 IIRVTSVEEAIEISNKS 400 (474)
T ss_dssp EEEESCHHHHHHHHHHS
T ss_pred EEEeCCHHHHHHHHHCC
Confidence 99999999999999975
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.6e-69 Score=538.40 Aligned_cols=355 Identities=43% Similarity=0.741 Sum_probs=326.0
Q ss_pred HHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcC
Q 014211 69 AASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTK 148 (429)
Q Consensus 69 v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~ 148 (429)
|++||++|++||+.|+.+|..+|.++|++++++|++++++|++++++|+||+..++..+|+..+++.+++++..+..|..
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 68999999999999999999999999999999999999999999999999999999778999999999999999988877
Q ss_pred CCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCce
Q 014211 149 PEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAV 228 (429)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v 228 (429)
...........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++.++++++.+.+|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~~~~~~~ 161 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLY 161 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHSCTTTE
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccccccccc
Confidence 66544444445566789999999999999999999999999999999999999999999999999999999888999999
Q ss_pred EEecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCC
Q 014211 229 RVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQ 308 (429)
Q Consensus 229 ~~v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq 308 (429)
+++.++......+..+.+|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .++||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~-~~~GQ 240 (446)
T d1ad3a_ 162 LVVKGGVPETTELLKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF-MNSGQ 240 (446)
T ss_dssp EECCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH-TTTTC
T ss_pred ccccccchhhhhhcccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh-cCCCC
Confidence 99998777666666556999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred ccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCCCCceEec
Q 014211 309 ACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAP 388 (429)
Q Consensus 309 ~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~~g~~~~P 388 (429)
.|+++++||||++++++|++++.+.++.+.+.++++++++||++++.+.+++..+++++ +...|+..+..++|+.|
T Consensus 241 ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a----~~~~g~~~~~~~~~~~P 316 (446)
T d1ad3a_ 241 TCVAPDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQ----KVAHGGTWDQSSRYIAP 316 (446)
T ss_dssp CTTSCCEEEECGGGHHHHHHHHHHHHHHHHCSCGGGCTTSCCCSCHHHHHHHHHTTTTS----CEEECCCEETTTTEECC
T ss_pred ccccCCccccccchhHHHHHhhhhhhheeecccccccccccchhhhhhhhhhhccccch----hcccceeecCCCCCcCC
Confidence 99999999999999999999999999888544335789999999999999998887743 44455555667889999
Q ss_pred EEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 389 TILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 389 tvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
||+.+++++|++++||+||||++|++|+|.||||+++|++
T Consensus 317 til~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~ 356 (446)
T d1ad3a_ 317 TILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQR 356 (446)
T ss_dssp EEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTS
T ss_pred EEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999975
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=2.3e-66 Score=525.75 Aligned_cols=370 Identities=18% Similarity=0.199 Sum_probs=310.5
Q ss_pred eEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhh
Q 014211 46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125 (429)
Q Consensus 46 ~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 125 (429)
+...||+|||.|+..+|.++.+|+++||++|++||+.|+++++.+|.++|+++++.|++++++|++++++|+|||..++.
T Consensus 5 f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~~a~ 84 (504)
T d1ez0a_ 5 FYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT 84 (504)
T ss_dssp EEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred EEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 55555699999987788999999999999999999999999999999999999999999999999999999999999996
Q ss_pred HhhHHHHHHHHHHHHHHHHhhcCCCccc-----ccccCCCCcceEEeecceEEEEEcCCchhhhhhh--hHHHHHHhcCC
Q 014211 126 ISEISMTKSSCKLALKELKYWTKPEKAK-----TSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSL--DPVIGAIAAGN 198 (429)
Q Consensus 126 ~~ev~~a~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~--~~~~~ALaaGN 198 (429)
+|+..+++.++|+++.++++....... ..........+..+.|+|||++|+|||||+...+ +++++||++||
T Consensus 85 -~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN 163 (504)
T d1ez0a_ 85 -GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGC 163 (504)
T ss_dssp -HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTC
T ss_pred -HHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHHhc
Confidence 799999999999999988765543321 1111223456788899999999999999997554 58999999999
Q ss_pred eEEecCCCCChHHHHHHHHH----Hhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCc
Q 014211 199 AVVLKPSEIAPATSSLLAKL----LEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTP 271 (429)
Q Consensus 199 ~vV~kps~~~~~~~~~l~~~----l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~ 271 (429)
+||+|||+.+|.++.++.++ +.++ +|+|++|+|+| +.+.++.|++|+ |+.|.||||+.+|+.|.+.++++++|
T Consensus 164 ~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~~~~ 243 (504)
T d1ez0a_ 164 PVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEP 243 (504)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSC
T ss_pred cceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHHhhhhccccc
Confidence 99999999999988776555 4566 99999999999 567889999997 99999999999999999999998876
Q ss_pred e--eeecCCCCcEEEcCCCCHHHHH--HHHHHHHHHhcCCCccccccEEEEeCCch-HHHHHHHHHHHhhhhCCCCCCCC
Q 014211 272 V--ILELGGKSPAVVDSTINLQVTT--RRIIAGKWMANNGQACIGVDYIITTKDFA-PKLIDSLRNELKEFFGKNPMESK 346 (429)
Q Consensus 272 ~--~~e~~G~~~~iV~~dadl~~aa--~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~-~~f~~~l~~~~~~~~~g~~~~~~ 346 (429)
+ ++|+|||||+||++|||++.|+ +.++.++| +|+||.|++++++||+++.+ +.|++.+++.++.. + +++
T Consensus 244 ~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~-~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~~---~--~~~ 317 (504)
T d1ez0a_ 244 IPFYGELGAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQ---S--PST 317 (504)
T ss_dssp CCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHC---C--CBC
T ss_pred ccccccccccccccccccccHHHHhhhhccccchh-hccCccccccccccchhhhhHHHHhhhhhhhhhhc---c--ccc
Confidence 5 5599999999999999999874 47899999 99999999999999988874 56777776655532 2 367
Q ss_pred cccccCCHHHHHHHHhHHHhhhc-CCEEEeCCccCCCCceEecEEEec---CCCCCCccccCccccceeeEecCCHHHHH
Q 014211 347 DLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLD---VPDDSTIMKEEIFGPLLPIVTVSIVSSAH 422 (429)
Q Consensus 347 ~~gpl~~~~~~~~~~~~i~~a~~-~~~vl~gg~~~~~g~~~~Ptvl~~---~~~~~~~~~~E~fgPv~~v~~~~~~~eai 422 (429)
.+||+++..+.+++ ++.+.. +..+..||.. +.+..|+++.. +..++++++||+||||++|++|+|.+|||
T Consensus 318 ~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai 391 (504)
T d1ez0a_ 318 LLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE---SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADML 391 (504)
T ss_dssp CSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC---TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHH
T ss_pred ccccchhhhhhhhh---hhhhhhhhhhccccccc---ccccCCccccccccccccchhhcccccCCeeeeeecCCHHHHH
Confidence 89999988877666 444444 4566666653 34445555433 33478899999999999999999999999
Q ss_pred HHHHhh
Q 014211 423 FKLKAC 428 (429)
Q Consensus 423 ~l~n~~ 428 (429)
+++|++
T Consensus 392 ~~an~~ 397 (504)
T d1ez0a_ 392 SLSEML 397 (504)
T ss_dssp HHHHTC
T ss_pred HHHHCC
Confidence 999975
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.6e-48 Score=386.44 Aligned_cols=312 Identities=15% Similarity=0.191 Sum_probs=240.2
Q ss_pred HHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhh------------HHHHHH
Q 014211 67 EKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISE------------ISMTKS 134 (429)
Q Consensus 67 ~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~e------------v~~a~~ 134 (429)
+|+++++++|++||+.|+++|+.+|.++|++++++|++|+++|++++++|+||+..++. +| +..+++
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~-~e~~~~rl~~~~~~i~~~~~ 79 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGV-KESLVDRLALNDKRIDEMIK 79 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTC-CHHHHHHHCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccc-cHHHHHHHhccHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999988763 34 334445
Q ss_pred HHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHH
Q 014211 135 SCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL 214 (429)
Q Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~ 214 (429)
.+++++...+... ...............++|+|+++++.|||||+...++++++||++||+||+|||+.+|.++..
T Consensus 80 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~ 155 (414)
T d1o20a_ 80 ACETVIGLKDPVG----EVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKA 155 (414)
T ss_dssp HHHHHHHSCCCTT----CEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHH
T ss_pred HHHHHHHhhhhcc----ccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccch
Confidence 5554444222111 111111223456778899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh-cCCC----ceEEecC-CHHHHHHHHhcC--CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCc-EEEc
Q 014211 215 LAKLLEDY-VDNS----AVRVVEG-AVAETSALLEQK--WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP-AVVD 285 (429)
Q Consensus 215 l~~~l~~a-lP~~----~v~~v~~-~~~~~~~L~~~~--v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~-~iV~ 285 (429)
++++++++ .|.+ +++.+.+ .......++.++ .....++| +..+.+.++++++++++|+||+|+ +||+
T Consensus 156 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~a~~~~~~~~le~gGgn~~viv~ 231 (414)
T d1o20a_ 156 IVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRG----GYGLISFVRDNATVPVLETGVGNCHIFVD 231 (414)
T ss_dssp HHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECS----CHHHHHHHHHHCSSCBCCCCCCCEEEEEC
T ss_pred hhhHHHhhhhhccccccccccccccchhhhhhcccccccCeEEEccc----HHHHHHHhhhccccceecccCCCCCeecc
Confidence 99999887 5554 4566655 445566666553 34444444 444566666677888888888765 7788
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHH
Q 014211 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD 365 (429)
Q Consensus 286 ~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~ 365 (429)
+|||++.|++.++.++| .+ ||.|+++++++||+++|++|+++|.+...+..++.+. .+ .....
T Consensus 232 ~dAd~~~A~~~~~~~~~-~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~---------~~----~~~~~-- 294 (414)
T d1o20a_ 232 ESADLKKAVPVIINAKT-QR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRG---------CE----KTREI-- 294 (414)
T ss_dssp TTSCHHHHHHHHHHHHH-SC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEE---------CH----HHHHH--
T ss_pred cccchhhhhhHHHhhhh-cC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCcccc---------ch----hhhhh--
Confidence 99999999999999988 66 9999999999999999999999999998876554321 11 11111
Q ss_pred hhhcCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 366 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 366 ~a~~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
.+.+.. .....+++|+||||++|++|+|+||||+++|++
T Consensus 295 ---------------------~~~~~~---~~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~ 333 (414)
T d1o20a_ 295 ---------------------VPDVVP---ATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKY 333 (414)
T ss_dssp ---------------------STTSEE---CCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHH
T ss_pred ---------------------ccccee---cccccCCceeeeeEEEEEEeCCHHHHHHHHhcC
Confidence 011111 122356899999999999999999999999985
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.8e-39 Score=319.25 Aligned_cols=326 Identities=18% Similarity=0.135 Sum_probs=219.5
Q ss_pred HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHH------HHhcCCCchhh-hH-----hhHHHHHHH
Q 014211 68 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAI------HKDLSKPPFET-FI-----SEISMTKSS 135 (429)
Q Consensus 68 dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~------~~e~Gk~~~~a-~~-----~ev~~a~~~ 135 (429)
.+++.++.|++|++.|+.++.++|.++|+++++.|++++++|++.. +.+.|++...- ++ ..+...++.
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~ 83 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 83 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHH
Confidence 5678899999999999999999999999999999999999998753 44455442210 00 012222233
Q ss_pred HHHHHHHHHhhcCCC--cccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHH
Q 014211 136 CKLALKELKYWTKPE--KAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS 213 (429)
Q Consensus 136 l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~ 213 (429)
++..+ .+..+. .........+...+..+.|+||+++| ++++| ..++...+.||++||+||+||++.++.++.
T Consensus 84 l~~i~----~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~ 157 (436)
T d1vlua_ 84 IKDVA----ELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFR 157 (436)
T ss_dssp HHHHH----HSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHH
T ss_pred HHHHH----hccccceeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHH
Confidence 33222 111111 11111112344467788999999988 56667 566778899999999999999999999988
Q ss_pred HHHHHHh--------hh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEE
Q 014211 214 LLAKLLE--------DY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283 (429)
Q Consensus 214 ~l~~~l~--------~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~i 283 (429)
.+.++++ ++ +|++++++++++.+.+..|..|+ +|.|.||||...++.+.+... +|++.+++|++|+|
T Consensus 158 ~l~~~~~~al~~a~~~aGlP~~~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---~pvi~~~~G~~~~~ 234 (436)
T d1vlua_ 158 EMAKIVNDTIAQFQSETGVPVGSVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGICSIY 234 (436)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTSEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---SCBTTBCSCCEEEE
T ss_pred HHHHHHHHhhhhhccccCCCCceEEEecchhHHHHHhccCCCCceEEEecCCceeeeeecccc---ceEEEecCCcccee
Confidence 8877664 55 89999999998778888888887 999999999998877765543 59999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhH
Q 014211 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASL 363 (429)
Q Consensus 284 V~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~ 363 (429)
|++|||++.|++.++.++| .++|+ |++.++++||+++++.|...+....+.- + .+. .++.........
T Consensus 235 Vd~~ADl~~A~~~i~~ak~-~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~g-v-------~l~--~~~~~~~~~~~~ 302 (436)
T d1vlua_ 235 LDEDADLIKAKRISLDAKT-NYPAG-CNAMETLLINPKFSKWWEVLENLTLEGG-V-------TIH--ATKDLKTAYFDK 302 (436)
T ss_dssp ECTTCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTSTTHHHHHHHHHHHHC-C-------CBE--ECHHHHHHHHHH
T ss_pred ecccccHHHHHHHHHHHhc-cCCCc-cccccceeecHhhhhhhhhhHHHHHhCC-c-------EEE--eCHHHHHHhhhh
Confidence 9999999999999999999 88886 9999999999999988866554443321 1 010 011111111111
Q ss_pred HHhhhcCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014211 364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 364 i~~a~~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+.. .+ .. .+....|++... ....|.+|.|+|+++|++|+|+||||+++|+.
T Consensus 303 ~~~---~~------~~--~~~~~~~~~~~~---~~~d~~~E~l~pvl~v~~v~~~eEAI~~in~~ 353 (436)
T d1vlua_ 303 LNE---LG------KL--TEAIQCKTVDAD---EEQDFDKEFLSLDLAAKFVTSTESAIQHINTH 353 (436)
T ss_dssp HHH---HT------CC--CHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTS
T ss_pred hhh---cc------cc--cccccccccCCC---cccchhhhhhCcceeEEEECCHHHHHHHHHHh
Confidence 111 00 00 111222333222 22347899999999999999999999999863
|