Query 014213
Match_columns 429
No_of_seqs 313 out of 1967
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 07:30:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014213.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014213hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.8 3.1E-20 1.1E-24 158.7 17.4 115 43-163 11-125 (126)
2 3rkv_A Putative peptidylprolyl 99.8 7.8E-19 2.7E-23 153.7 14.5 129 42-172 8-151 (162)
3 2kkc_A Sequestosome-1; P62, PB 99.8 4.4E-19 1.5E-23 148.3 11.1 78 261-339 5-101 (102)
4 2hr2_A Hypothetical protein; a 99.8 9.9E-19 3.4E-23 158.0 11.0 125 43-169 9-152 (159)
5 2ktr_A Sequestosome-1; autopha 99.8 1.8E-18 6E-23 147.5 11.3 81 258-339 17-116 (117)
6 3upv_A Heat shock protein STI1 99.8 1.5E-17 5E-22 139.1 15.9 117 44-166 3-125 (126)
7 4gcn_A Protein STI-1; structur 99.8 1.8E-17 6.2E-22 141.3 15.0 115 41-162 4-125 (127)
8 1q1o_A Cell division control p 99.7 2.1E-18 7.3E-23 142.5 8.6 77 261-337 5-97 (98)
9 1vd2_A Protein kinase C, IOTA 99.7 1.6E-17 5.5E-22 135.5 11.6 80 259-338 4-87 (89)
10 3sz7_A HSC70 cochaperone (SGT) 99.7 7.7E-17 2.7E-21 141.2 16.7 122 43-170 9-132 (164)
11 2fbn_A 70 kDa peptidylprolyl i 99.7 5.5E-16 1.9E-20 139.9 19.0 143 27-173 22-176 (198)
12 3gyz_A Chaperone protein IPGC; 99.7 4E-16 1.4E-20 138.5 16.4 104 44-153 35-138 (151)
13 4ga2_A E3 SUMO-protein ligase 99.7 1.5E-16 5E-21 139.2 12.8 117 44-166 30-147 (150)
14 2vgx_A Chaperone SYCD; alterna 99.7 7.8E-16 2.7E-20 134.7 15.7 119 44-168 20-138 (148)
15 2xcb_A PCRH, regulatory protei 99.7 8.7E-16 3E-20 132.0 15.2 118 45-168 18-135 (142)
16 1p5q_A FKBP52, FK506-binding p 99.7 1.5E-15 5.2E-20 150.4 18.3 131 40-172 142-283 (336)
17 1pqs_A Cell division control p 99.7 6E-17 2.1E-21 128.8 6.2 68 270-337 1-76 (77)
18 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 8.5E-16 2.9E-20 158.7 16.2 133 39-173 262-405 (457)
19 3q49_B STIP1 homology and U bo 99.7 2.8E-15 9.7E-20 125.6 15.4 118 45-168 9-131 (137)
20 4gyw_A UDP-N-acetylglucosamine 99.6 8E-16 2.7E-20 168.6 15.1 148 43-201 7-156 (723)
21 2dba_A Smooth muscle cell asso 99.6 1.1E-14 3.8E-19 122.5 18.5 116 45-163 28-143 (148)
22 1elw_A TPR1-domain of HOP; HOP 99.6 9E-15 3.1E-19 117.4 16.9 116 43-164 2-117 (118)
23 3urz_A Uncharacterized protein 99.6 3.2E-15 1.1E-19 137.1 15.5 118 45-168 4-137 (208)
24 2lni_A Stress-induced-phosphop 99.6 8E-15 2.7E-19 120.8 15.2 117 45-167 16-132 (133)
25 1ihg_A Cyclophilin 40; ppiase 99.6 3.3E-15 1.1E-19 150.7 15.5 134 38-173 216-361 (370)
26 2vyi_A SGTA protein; chaperone 99.6 2.6E-14 8.8E-19 116.5 17.7 120 43-168 10-129 (131)
27 1a17_A Serine/threonine protei 99.6 3.2E-14 1.1E-18 121.9 18.5 126 42-173 10-137 (166)
28 3vtx_A MAMA; tetratricopeptide 99.6 6.1E-15 2.1E-19 130.3 14.2 150 44-202 4-153 (184)
29 4ga2_A E3 SUMO-protein ligase 99.6 1.6E-16 5.4E-21 139.0 3.9 126 51-182 3-131 (150)
30 4i17_A Hypothetical protein; T 99.6 6.5E-15 2.2E-19 134.8 14.3 144 46-198 8-161 (228)
31 1wmh_B Partitioning defective- 99.6 3.3E-15 1.1E-19 120.5 9.9 77 260-338 5-84 (86)
32 2pl2_A Hypothetical conserved 99.6 6.7E-15 2.3E-19 135.8 13.4 125 46-176 6-141 (217)
33 2h6f_A Protein farnesyltransfe 99.6 3.4E-15 1.2E-19 151.7 12.4 150 43-201 95-245 (382)
34 2if4_A ATFKBP42; FKBP-like, al 99.6 2E-15 6.8E-20 149.8 8.9 128 38-167 172-312 (338)
35 1hxi_A PEX5, peroxisome target 99.6 1.1E-14 3.7E-19 123.1 12.0 102 47-154 19-120 (121)
36 1elr_A TPR2A-domain of HOP; HO 99.6 5.4E-14 1.9E-18 114.9 15.9 119 44-169 3-128 (131)
37 2xev_A YBGF; tetratricopeptide 99.6 5.8E-14 2E-18 116.3 16.1 117 46-165 3-122 (129)
38 4gyw_A UDP-N-acetylglucosamine 99.6 2.6E-14 8.8E-19 156.7 16.7 125 44-174 42-166 (723)
39 1na0_A Designed protein CTPR3; 99.6 2.7E-13 9.3E-18 109.5 17.6 116 45-166 9-124 (125)
40 2pl2_A Hypothetical conserved 99.5 5.3E-14 1.8E-18 129.7 14.3 123 45-174 73-206 (217)
41 2h6f_A Protein farnesyltransfe 99.5 1.1E-14 3.7E-19 148.0 10.4 119 44-168 130-249 (382)
42 3vtx_A MAMA; tetratricopeptide 99.5 1.8E-13 6.3E-18 120.7 15.8 131 45-181 39-171 (184)
43 2c2l_A CHIP, carboxy terminus 99.5 1.2E-13 4.1E-18 133.0 14.0 102 45-152 4-105 (281)
44 1wao_1 Serine/threonine protei 99.5 4.2E-14 1.4E-18 147.1 11.1 126 43-174 4-131 (477)
45 4i17_A Hypothetical protein; T 99.5 1.1E-13 3.9E-18 126.4 12.6 118 46-169 43-169 (228)
46 1zu2_A Mitochondrial import re 99.5 9.9E-14 3.4E-18 125.1 9.7 104 57-166 14-138 (158)
47 1hh8_A P67PHOX, NCF-2, neutrop 99.5 3.9E-13 1.3E-17 120.8 13.6 130 43-181 4-151 (213)
48 3urz_A Uncharacterized protein 99.5 1.7E-12 5.8E-17 118.8 16.2 90 51-146 60-151 (208)
49 2e2e_A Formate-dependent nitri 99.4 1.5E-12 5.1E-17 114.5 15.2 115 44-164 43-160 (177)
50 2fo7_A Synthetic consensus TPR 99.4 1.7E-12 6E-17 105.4 14.3 123 46-174 2-124 (136)
51 2kck_A TPR repeat; tetratricop 99.4 5.7E-13 1.9E-17 106.0 11.0 101 47-153 8-111 (112)
52 4gco_A Protein STI-1; structur 99.4 8.9E-14 3E-18 118.4 6.6 104 72-181 6-111 (126)
53 3k9i_A BH0479 protein; putativ 99.4 1.1E-13 3.7E-18 114.9 6.8 101 57-163 2-105 (117)
54 3ieg_A DNAJ homolog subfamily 99.4 3.9E-12 1.3E-16 121.0 18.5 122 46-169 235-356 (359)
55 3u4t_A TPR repeat-containing p 99.4 7.2E-13 2.5E-17 122.8 12.7 143 46-197 4-149 (272)
56 3as5_A MAMA; tetratricopeptide 99.4 4.3E-12 1.5E-16 109.2 16.4 123 46-174 43-165 (186)
57 2pzi_A Probable serine/threoni 99.4 2E-13 6.9E-18 147.8 9.8 144 46-199 434-577 (681)
58 3gyz_A Chaperone protein IPGC; 99.4 3.9E-14 1.3E-18 125.6 3.4 110 66-181 23-134 (151)
59 2bkf_A Zinc-finger protein NBR 99.4 9.9E-13 3.4E-17 105.8 11.2 79 260-339 5-86 (87)
60 3uq3_A Heat shock protein STI1 99.4 2.6E-12 9E-17 117.0 15.4 112 45-162 139-256 (258)
61 3qky_A Outer membrane assembly 99.4 5.9E-13 2E-17 124.6 11.3 128 45-175 15-170 (261)
62 3uq3_A Heat shock protein STI1 99.4 5.7E-12 1.9E-16 114.7 17.6 128 45-174 79-228 (258)
63 2vsy_A XCC0866; transferase, g 99.4 1E-12 3.4E-17 137.7 14.1 124 45-174 23-149 (568)
64 1fch_A Peroxisomal targeting s 99.4 4E-12 1.4E-16 122.7 16.1 121 46-172 218-349 (368)
65 2q7f_A YRRB protein; TPR, prot 99.4 4.2E-12 1.4E-16 115.1 15.1 124 45-174 57-180 (243)
66 1xnf_A Lipoprotein NLPI; TPR, 99.4 7.5E-12 2.6E-16 115.6 17.1 124 44-174 42-165 (275)
67 3as5_A MAMA; tetratricopeptide 99.4 1.5E-12 5.2E-17 112.0 11.3 125 44-174 7-131 (186)
68 2q7f_A YRRB protein; TPR, prot 99.4 2.7E-12 9.2E-17 116.4 13.3 124 45-174 91-214 (243)
69 2ho1_A Type 4 fimbrial biogene 99.4 1.4E-12 4.6E-17 119.8 11.4 125 44-174 36-162 (252)
70 3ieg_A DNAJ homolog subfamily 99.4 1.9E-12 6.6E-17 123.2 12.5 124 45-174 3-141 (359)
71 4abn_A Tetratricopeptide repea 99.4 7.1E-13 2.4E-17 137.1 10.2 147 44-199 101-267 (474)
72 1w3b_A UDP-N-acetylglucosamine 99.4 4E-12 1.4E-16 124.9 14.6 124 45-174 169-292 (388)
73 3qky_A Outer membrane assembly 99.4 8E-12 2.7E-16 116.9 15.9 119 45-166 52-198 (261)
74 1w3b_A UDP-N-acetylglucosamine 99.4 3E-12 1E-16 125.8 13.6 124 45-174 203-326 (388)
75 1hh8_A P67PHOX, NCF-2, neutrop 99.4 5.3E-12 1.8E-16 113.3 14.0 104 45-154 37-156 (213)
76 3qou_A Protein YBBN; thioredox 99.4 3.8E-12 1.3E-16 122.6 13.5 125 44-174 116-276 (287)
77 2e2e_A Formate-dependent nitri 99.4 7.6E-13 2.6E-17 116.4 7.8 126 51-182 16-146 (177)
78 2vq2_A PILW, putative fimbrial 99.4 5.6E-12 1.9E-16 112.4 13.4 125 44-174 7-134 (225)
79 4eqf_A PEX5-related protein; a 99.4 3.6E-12 1.2E-16 123.9 13.1 101 46-152 66-166 (365)
80 2l6j_A TPR repeat-containing p 99.4 4.1E-13 1.4E-17 107.9 5.1 92 45-142 4-101 (111)
81 3hym_B Cell division cycle pro 99.4 6.3E-12 2.2E-16 118.7 14.1 123 48-176 162-293 (330)
82 4eqf_A PEX5-related protein; a 99.4 4.4E-12 1.5E-16 123.3 13.4 124 45-174 177-302 (365)
83 2y4t_A DNAJ homolog subfamily 99.4 1.6E-11 5.5E-16 122.0 17.6 124 46-171 258-381 (450)
84 1wj6_A KIAA0049 protein, RSGI 99.4 2.2E-12 7.7E-17 106.1 9.2 80 259-339 12-94 (101)
85 2y4t_A DNAJ homolog subfamily 99.4 5.2E-12 1.8E-16 125.6 13.9 114 43-162 24-140 (450)
86 2yhc_A BAMD, UPF0169 lipoprote 99.4 3.8E-12 1.3E-16 117.4 11.9 110 45-157 4-134 (225)
87 2vgx_A Chaperone SYCD; alterna 99.4 4.2E-13 1.4E-17 117.2 5.0 110 66-181 8-119 (148)
88 2ho1_A Type 4 fimbrial biogene 99.3 1E-11 3.4E-16 114.0 14.2 124 45-174 71-196 (252)
89 3u4t_A TPR repeat-containing p 99.3 1.5E-11 5E-16 113.9 14.8 114 48-167 77-190 (272)
90 4abn_A Tetratricopeptide repea 99.3 5.6E-12 1.9E-16 130.4 12.9 125 46-174 171-313 (474)
91 3cv0_A Peroxisome targeting si 99.3 1.8E-11 6.3E-16 115.3 15.3 124 45-174 172-307 (327)
92 2r5s_A Uncharacterized protein 99.3 5.6E-12 1.9E-16 111.7 10.9 121 47-174 8-129 (176)
93 2kat_A Uncharacterized protein 99.3 1.9E-11 6.7E-16 100.3 12.7 101 62-168 2-104 (115)
94 1qqe_A Vesicular transport pro 99.3 1.4E-11 4.7E-16 118.5 13.0 127 46-174 78-220 (292)
95 3hym_B Cell division cycle pro 99.3 2.8E-11 9.5E-16 114.2 14.7 122 47-174 92-214 (330)
96 2gw1_A Mitochondrial precursor 99.3 3.7E-11 1.3E-15 120.8 16.2 105 43-154 4-108 (514)
97 2pzi_A Probable serine/threoni 99.3 8.5E-12 2.9E-16 135.0 12.2 137 56-202 402-546 (681)
98 1fch_A Peroxisomal targeting s 99.3 8.1E-11 2.8E-15 113.5 17.6 89 84-174 218-306 (368)
99 2yhc_A BAMD, UPF0169 lipoprote 99.3 4.2E-11 1.4E-15 110.4 14.5 128 46-174 42-205 (225)
100 2fo7_A Synthetic consensus TPR 99.3 9.4E-11 3.2E-15 95.0 14.0 101 46-152 36-136 (136)
101 2vq2_A PILW, putative fimbrial 99.3 6.3E-11 2.1E-15 105.5 14.1 125 45-174 42-168 (225)
102 2xcb_A PCRH, regulatory protei 99.3 5.9E-12 2E-16 107.9 6.9 110 66-181 5-116 (142)
103 1xnf_A Lipoprotein NLPI; TPR, 99.3 3.3E-11 1.1E-15 111.2 12.0 125 55-181 15-141 (275)
104 3mkr_A Coatomer subunit epsilo 99.2 6.8E-11 2.3E-15 114.5 14.6 133 45-181 130-265 (291)
105 3edt_B KLC 2, kinesin light ch 99.2 4.9E-11 1.7E-15 109.4 11.9 128 44-174 42-190 (283)
106 3upv_A Heat shock protein STI1 99.2 2.8E-11 9.6E-16 100.6 9.0 91 83-175 4-94 (126)
107 4gcn_A Protein STI-1; structur 99.2 1.9E-11 6.6E-16 103.7 7.8 98 81-180 6-110 (127)
108 1hxi_A PEX5, peroxisome target 99.2 1.1E-10 3.8E-15 98.2 12.3 95 85-181 19-115 (121)
109 3fp2_A TPR repeat-containing p 99.2 6.5E-11 2.2E-15 120.2 12.9 126 42-174 240-365 (537)
110 2l6j_A TPR repeat-containing p 99.2 1.5E-10 5.2E-15 92.7 12.5 91 83-175 4-100 (111)
111 3cv0_A Peroxisome targeting si 99.2 4.3E-11 1.5E-15 112.8 10.0 108 46-159 22-129 (327)
112 4a1s_A PINS, partner of inscut 99.2 7.3E-11 2.5E-15 116.1 12.0 124 43-168 46-181 (411)
113 3sz7_A HSC70 cochaperone (SGT) 99.2 5.4E-11 1.8E-15 103.8 9.7 98 82-181 10-109 (164)
114 2vsy_A XCC0866; transferase, g 99.2 2.2E-11 7.5E-16 127.5 8.4 113 58-176 2-114 (568)
115 3fp2_A TPR repeat-containing p 99.2 9.4E-11 3.2E-15 119.0 12.8 123 46-174 277-399 (537)
116 1qqe_A Vesicular transport pro 99.2 8.5E-11 2.9E-15 113.0 11.8 137 43-181 35-188 (292)
117 4g1t_A Interferon-induced prot 99.2 3.5E-10 1.2E-14 113.5 16.4 123 45-169 51-188 (472)
118 2hr2_A Hypothetical protein; a 99.2 2.8E-11 9.4E-16 109.2 7.3 96 83-180 11-129 (159)
119 1na3_A Designed protein CTPR2; 99.2 4.1E-10 1.4E-14 87.1 12.5 78 85-164 11-88 (91)
120 3mkr_A Coatomer subunit epsilo 99.2 3.9E-10 1.3E-14 109.2 15.1 100 54-159 175-275 (291)
121 3ro3_A PINS homolog, G-protein 99.2 2.6E-10 9E-15 95.3 12.0 130 43-174 7-150 (164)
122 1na3_A Designed protein CTPR2; 99.2 5.8E-10 2E-14 86.2 12.9 84 44-133 8-91 (91)
123 3q49_B STIP1 homology and U bo 99.1 1.2E-10 4E-15 97.1 9.3 96 84-181 10-107 (137)
124 3ro2_A PINS homolog, G-protein 99.1 2.2E-10 7.6E-15 107.1 11.8 122 45-168 5-138 (338)
125 2xpi_A Anaphase-promoting comp 99.1 2.6E-10 8.7E-15 117.8 13.3 124 45-174 407-537 (597)
126 2kc7_A BFR218_protein; tetratr 99.1 9.2E-11 3.1E-15 93.3 7.3 67 88-156 5-72 (99)
127 2kck_A TPR repeat; tetratricop 99.1 1.3E-10 4.5E-15 92.1 8.1 94 75-174 2-98 (112)
128 3sf4_A G-protein-signaling mod 99.1 3.7E-10 1.3E-14 109.6 12.4 122 45-168 9-142 (406)
129 2xpi_A Anaphase-promoting comp 99.1 9.7E-10 3.3E-14 113.4 16.1 124 45-174 305-428 (597)
130 3edt_B KLC 2, kinesin light ch 99.1 1.9E-10 6.6E-15 105.4 9.4 102 44-148 84-198 (283)
131 2gw1_A Mitochondrial precursor 99.1 1.2E-10 4.1E-15 117.0 8.5 113 47-165 306-424 (514)
132 3ulq_A Response regulator aspa 99.1 4E-10 1.4E-14 111.1 11.9 130 43-174 141-285 (383)
133 1p5q_A FKBP52, FK506-binding p 99.1 6.7E-10 2.3E-14 109.7 13.2 99 43-147 194-293 (336)
134 1kt0_A FKBP51, 51 kDa FK506-bi 99.1 1.4E-11 4.9E-16 127.0 1.2 117 59-181 248-381 (457)
135 3ma5_A Tetratricopeptide repea 99.1 6.4E-10 2.2E-14 90.1 10.8 86 75-166 3-90 (100)
136 1a17_A Serine/threonine protei 99.1 1.3E-09 4.5E-14 92.8 13.1 98 45-148 47-146 (166)
137 1elw_A TPR1-domain of HOP; HOP 99.1 1.1E-09 3.9E-14 87.2 11.3 91 83-175 4-94 (118)
138 1dce_A Protein (RAB geranylger 99.1 2.3E-09 7.8E-14 114.2 16.4 145 43-196 26-184 (567)
139 3rkv_A Putative peptidylprolyl 99.0 2.2E-10 7.4E-15 99.7 6.6 98 82-181 10-127 (162)
140 1dce_A Protein (RAB geranylger 99.0 7.4E-10 2.5E-14 118.0 11.8 118 43-166 61-191 (567)
141 3nf1_A KLC 1, kinesin light ch 99.0 9.3E-10 3.2E-14 102.8 11.1 128 45-174 69-216 (311)
142 2qfc_A PLCR protein; TPR, HTH, 99.0 3.8E-09 1.3E-13 101.0 15.5 123 48-172 118-255 (293)
143 3nf1_A KLC 1, kinesin light ch 99.0 1.3E-09 4.4E-14 101.8 11.8 102 44-148 110-224 (311)
144 4g1t_A Interferon-induced prot 99.0 1.2E-09 3.9E-14 109.7 11.6 121 46-166 95-222 (472)
145 1oey_A P67-PHOX, neutrophil cy 99.0 9.1E-10 3.1E-14 88.5 8.6 77 260-339 4-82 (83)
146 3q15_A PSP28, response regulat 99.0 1.3E-09 4.6E-14 107.6 11.7 130 43-174 139-282 (378)
147 1ouv_A Conserved hypothetical 99.0 6.1E-09 2.1E-13 97.4 15.3 118 45-174 6-135 (273)
148 2ond_A Cleavage stimulation fa 99.0 2.8E-09 9.4E-14 102.8 13.1 124 46-174 100-224 (308)
149 3u3w_A Transcriptional activat 99.0 2.1E-09 7E-14 102.8 11.7 127 46-174 116-258 (293)
150 3u3w_A Transcriptional activat 99.0 2.1E-09 7.2E-14 102.7 11.8 102 45-148 155-266 (293)
151 3sf4_A G-protein-signaling mod 99.0 1.7E-09 5.9E-14 104.9 11.3 128 45-174 187-328 (406)
152 2ifu_A Gamma-SNAP; membrane fu 99.0 1.5E-09 5.2E-14 104.9 10.8 127 45-174 76-216 (307)
153 3ulq_A Response regulator aspa 99.0 3.2E-09 1.1E-13 104.7 13.1 106 43-150 182-295 (383)
154 2lni_A Stress-induced-phosphop 99.0 1.3E-09 4.4E-14 89.2 8.5 92 81-174 14-105 (133)
155 3gw4_A Uncharacterized protein 99.0 2.3E-09 7.8E-14 94.6 10.5 129 44-174 25-168 (203)
156 2kc7_A BFR218_protein; tetratr 99.0 4.4E-09 1.5E-13 83.4 10.9 92 48-153 3-95 (99)
157 3q15_A PSP28, response regulat 99.0 5.3E-09 1.8E-13 103.2 13.7 107 43-151 180-293 (378)
158 2fbn_A 70 kDa peptidylprolyl i 99.0 1.7E-10 5.9E-15 103.6 2.6 121 55-181 14-152 (198)
159 2qfc_A PLCR protein; TPR, HTH, 99.0 3.3E-09 1.1E-13 101.3 11.7 103 45-149 155-267 (293)
160 2ond_A Cleavage stimulation fa 98.9 2E-09 6.8E-14 103.8 9.9 114 44-163 49-178 (308)
161 3dra_A Protein farnesyltransfe 98.9 9E-09 3.1E-13 101.7 14.1 123 46-174 104-241 (306)
162 2ifu_A Gamma-SNAP; membrane fu 98.9 2.6E-09 9E-14 103.2 10.0 127 45-174 36-176 (307)
163 2vyi_A SGTA protein; chaperone 98.9 4.9E-09 1.7E-13 84.8 10.0 90 83-174 12-101 (131)
164 3ro3_A PINS homolog, G-protein 98.9 7.1E-09 2.4E-13 86.5 11.3 105 45-151 49-161 (164)
165 3ro2_A PINS homolog, G-protein 98.9 3.8E-09 1.3E-13 98.6 10.1 128 45-174 183-324 (338)
166 3n71_A Histone lysine methyltr 98.9 1E-08 3.5E-13 107.6 14.4 127 40-168 304-450 (490)
167 3dra_A Protein farnesyltransfe 98.9 9.1E-09 3.1E-13 101.7 12.8 117 47-167 69-194 (306)
168 2dba_A Smooth muscle cell asso 98.9 3.4E-09 1.2E-13 88.5 8.3 91 83-175 28-121 (148)
169 4a1s_A PINS, partner of inscut 98.9 2.2E-09 7.5E-14 105.4 8.2 128 45-174 223-364 (411)
170 2xev_A YBGF; tetratricopeptide 98.9 9.9E-09 3.4E-13 84.4 10.8 89 85-175 4-98 (129)
171 1wao_1 Serine/threonine protei 98.9 1.2E-09 3.9E-14 113.6 6.2 94 45-144 40-135 (477)
172 1na0_A Designed protein CTPR3; 98.9 8.7E-09 3E-13 82.6 10.1 90 83-174 9-98 (125)
173 2if4_A ATFKBP42; FKBP-like, al 98.9 1.1E-09 3.7E-14 108.4 5.6 102 47-154 232-334 (338)
174 3dss_A Geranylgeranyl transfer 98.9 1.3E-08 4.5E-13 101.8 13.1 117 44-166 63-192 (331)
175 1ouv_A Conserved hypothetical 98.9 3.7E-08 1.3E-12 92.0 15.3 109 45-165 38-158 (273)
176 1oey_J P40-PHOX, neutrophil cy 98.9 6.8E-09 2.3E-13 85.4 8.2 70 269-339 17-96 (107)
177 1pc2_A Mitochondria fission pr 98.8 2.4E-08 8.3E-13 89.2 12.0 104 61-170 14-122 (152)
178 2r5s_A Uncharacterized protein 98.8 2.5E-08 8.4E-13 88.0 12.0 126 43-175 38-166 (176)
179 3qww_A SET and MYND domain-con 98.8 4.8E-08 1.6E-12 101.0 15.8 122 39-162 292-430 (433)
180 3k9i_A BH0479 protein; putativ 98.8 2.3E-08 7.7E-13 82.5 10.8 76 44-125 26-101 (117)
181 2c2l_A CHIP, carboxy terminus 98.8 1.5E-08 5.1E-13 97.2 10.6 96 84-181 5-102 (281)
182 1elr_A TPR2A-domain of HOP; HO 98.8 2.1E-08 7.2E-13 81.2 9.6 92 83-176 4-102 (131)
183 3dss_A Geranylgeranyl transfer 98.8 7.8E-08 2.7E-12 96.1 15.3 117 43-165 106-239 (331)
184 3gw4_A Uncharacterized protein 98.8 4.6E-08 1.6E-12 86.1 11.8 105 44-150 65-178 (203)
185 3qwp_A SET and MYND domain-con 98.8 1.1E-07 3.6E-12 98.1 16.0 120 43-164 285-421 (429)
186 1ihg_A Cyclophilin 40; ppiase 98.8 3E-08 1E-12 99.6 11.6 92 44-141 272-363 (370)
187 3q7a_A Farnesyltransferase alp 98.8 6.7E-08 2.3E-12 97.3 13.9 111 54-170 63-176 (349)
188 4f3v_A ESX-1 secretion system 98.8 5E-08 1.7E-12 95.5 12.6 108 47-159 137-247 (282)
189 3ma5_A Tetratricopeptide repea 98.8 4.6E-08 1.6E-12 79.0 10.2 82 45-132 7-90 (100)
190 1zu2_A Mitochondrial import re 98.7 1.3E-08 4.6E-13 91.5 7.3 71 43-119 34-125 (158)
191 1hz4_A MALT regulatory protein 98.7 7.9E-08 2.7E-12 93.8 13.4 129 44-174 52-195 (373)
192 3qou_A Protein YBBN; thioredox 98.7 3.3E-08 1.1E-12 95.0 10.1 82 61-148 201-284 (287)
193 3rjv_A Putative SEL1 repeat pr 98.7 4.3E-08 1.5E-12 89.8 10.2 113 43-165 16-137 (212)
194 2v5f_A Prolyl 4-hydroxylase su 98.7 1.5E-07 5.3E-12 77.2 11.6 80 45-126 5-87 (104)
195 3q7a_A Farnesyltransferase alp 98.7 6.9E-08 2.4E-12 97.2 10.6 121 43-168 86-216 (349)
196 3rjv_A Putative SEL1 repeat pr 98.6 9.9E-08 3.4E-12 87.4 10.3 113 44-166 49-175 (212)
197 2kat_A Uncharacterized protein 98.6 1.6E-07 5.4E-12 76.6 9.8 83 45-133 19-103 (115)
198 2ooe_A Cleavage stimulation fa 98.6 1.6E-07 5.5E-12 97.1 12.0 131 45-180 321-454 (530)
199 2v5f_A Prolyl 4-hydroxylase su 98.6 6.1E-07 2.1E-11 73.6 12.9 82 85-168 7-95 (104)
200 1hz4_A MALT regulatory protein 98.6 2E-07 6.8E-12 90.9 11.6 130 43-174 12-156 (373)
201 3bee_A Putative YFRE protein; 98.6 2.7E-07 9.1E-12 75.2 10.2 75 75-155 2-79 (93)
202 1ip9_A BEM1 protein; ubiquitin 98.6 1.1E-07 3.6E-12 76.2 7.4 66 259-326 10-76 (85)
203 4f3v_A ESX-1 secretion system 98.5 4.7E-08 1.6E-12 95.7 4.4 122 46-174 103-229 (282)
204 2ooe_A Cleavage stimulation fa 98.5 2.3E-07 7.8E-12 96.0 8.6 112 45-162 272-399 (530)
205 2cu1_A Mitogen-activated prote 98.4 1.5E-06 5.1E-11 71.3 10.2 77 260-339 7-86 (103)
206 1klx_A Cysteine rich protein B 98.4 2.6E-06 9E-11 73.1 12.3 98 51-160 31-136 (138)
207 3ly7_A Transcriptional activat 98.4 3.5E-06 1.2E-10 85.3 14.6 132 45-181 196-340 (372)
208 3n71_A Histone lysine methyltr 98.4 1.1E-06 3.9E-11 92.0 10.6 102 44-147 350-463 (490)
209 2xm6_A Protein corresponding t 98.3 2.8E-06 9.6E-11 86.9 12.6 110 44-165 290-411 (490)
210 1nzn_A CGI-135 protein, fissio 98.3 4.6E-06 1.6E-10 72.1 10.5 104 59-168 15-123 (126)
211 2xm6_A Protein corresponding t 98.3 1.9E-05 6.6E-10 80.6 16.8 110 44-165 38-159 (490)
212 2npt_A Dual specificity mitoge 98.2 3.9E-06 1.4E-10 67.8 8.3 71 257-327 12-83 (106)
213 3e4b_A ALGK; tetratricopeptide 98.2 1E-05 3.5E-10 82.7 12.0 104 49-165 217-330 (452)
214 4b4t_Q 26S proteasome regulato 98.1 1.2E-05 4.2E-10 79.3 10.8 130 43-174 53-196 (434)
215 3e4b_A ALGK; tetratricopeptide 98.1 1.6E-05 5.3E-10 81.4 11.5 109 47-164 178-294 (452)
216 1klx_A Cysteine rich protein B 98.0 3.2E-05 1.1E-09 66.2 11.1 93 59-165 9-105 (138)
217 4b4t_Q 26S proteasome regulato 98.0 2E-05 6.8E-10 77.8 9.2 99 50-150 100-206 (434)
218 1xi4_A Clathrin heavy chain; a 98.0 4.1E-05 1.4E-09 88.7 12.8 107 46-166 1196-1327(1630)
219 3mv2_B Coatomer subunit epsilo 97.9 2.5E-05 8.7E-10 77.3 9.4 98 48-151 103-210 (310)
220 2jrh_A Mitogen-activated prote 97.9 0.00016 5.3E-09 58.0 11.9 78 260-340 3-83 (94)
221 1b89_A Protein (clathrin heavy 97.9 2.5E-05 8.6E-10 80.9 9.3 104 47-166 124-254 (449)
222 3u64_A Protein TP_0956; tetrat 97.9 4.6E-05 1.6E-09 74.8 10.5 89 61-151 179-272 (301)
223 3bee_A Putative YFRE protein; 97.9 5E-05 1.7E-09 61.5 8.4 68 45-118 6-76 (93)
224 3o48_A Mitochondria fission 1 97.8 0.00017 5.7E-09 62.8 10.4 86 84-169 41-128 (134)
225 3qwp_A SET and MYND domain-con 97.8 8.5E-05 2.9E-09 76.3 10.2 88 43-132 327-426 (429)
226 1pc2_A Mitochondria fission pr 97.7 8E-05 2.7E-09 66.4 8.4 79 45-128 32-114 (152)
227 3mv2_B Coatomer subunit epsilo 97.7 0.00017 5.9E-09 71.3 11.4 82 64-151 85-168 (310)
228 2npt_B Mitogen-activated prote 97.7 0.00031 1.1E-08 57.0 10.7 77 260-339 19-98 (100)
229 2c60_A Human mitogen-activated 97.7 0.00035 1.2E-08 57.4 11.0 77 260-339 30-109 (111)
230 1y8m_A FIS1; mitochondria, unk 97.7 0.00044 1.5E-08 60.9 12.3 87 84-170 40-128 (144)
231 3qww_A SET and MYND domain-con 97.6 0.00016 5.4E-09 74.6 9.9 76 44-121 339-423 (433)
232 1xi4_A Clathrin heavy chain; a 97.6 0.0003 1E-08 81.6 11.8 90 51-151 1055-1166(1630)
233 3ffl_A Anaphase-promoting comp 97.5 0.00062 2.1E-08 61.4 11.2 114 47-163 22-165 (167)
234 3u64_A Protein TP_0956; tetrat 97.3 0.00064 2.2E-08 66.7 9.1 82 100-181 178-270 (301)
235 1b89_A Protein (clathrin heavy 97.0 0.0003 1E-08 72.9 3.1 134 37-174 140-303 (449)
236 2ff4_A Probable regulatory pro 96.8 0.02 6.7E-07 57.8 15.0 104 42-147 112-233 (388)
237 3ly7_A Transcriptional activat 96.6 0.0066 2.3E-07 61.4 9.3 75 73-154 271-345 (372)
238 1nzn_A CGI-135 protein, fissio 96.4 0.0083 2.8E-07 51.6 7.5 78 46-128 36-117 (126)
239 4e6h_A MRNA 3'-END-processing 96.2 0.028 9.4E-07 61.1 12.4 82 61-148 325-407 (679)
240 1y8m_A FIS1; mitochondria, unk 96.0 0.065 2.2E-06 47.0 11.3 78 46-128 40-120 (144)
241 4e6h_A MRNA 3'-END-processing 96.0 0.036 1.2E-06 60.2 11.6 114 47-166 345-482 (679)
242 4h7y_A Dual specificity protei 95.9 0.1 3.6E-06 46.3 12.4 106 48-156 16-131 (161)
243 3o48_A Mitochondria fission 1 95.8 0.059 2E-06 46.7 10.2 79 46-129 41-122 (134)
244 3ffl_A Anaphase-promoting comp 95.4 0.052 1.8E-06 48.8 8.5 84 43-129 61-165 (167)
245 4gns_B Protein CSD3, chitin bi 94.4 0.1 3.6E-06 57.2 9.1 59 85-145 339-397 (754)
246 2uy1_A Cleavage stimulation fa 94.2 0.68 2.3E-05 47.8 14.7 117 46-166 214-367 (493)
247 1zbp_A Hypothetical protein VP 94.0 0.47 1.6E-05 45.8 11.7 63 53-121 5-67 (273)
248 1ya0_A SMG-7 transcript varian 93.6 0.38 1.3E-05 50.3 11.3 80 85-166 154-233 (497)
249 3txn_A 26S proteasome regulato 93.1 1.3 4.6E-05 44.7 14.1 97 50-148 104-210 (394)
250 4gns_B Protein CSD3, chitin bi 93.0 0.22 7.4E-06 54.7 8.6 57 47-109 339-395 (754)
251 4g26_A Pentatricopeptide repea 92.3 3.4 0.00012 42.7 16.2 106 48-161 108-218 (501)
252 1ya0_A SMG-7 transcript varian 91.6 0.88 3E-05 47.5 10.8 79 47-131 154-232 (497)
253 4b4t_R RPN7, 26S proteasome re 91.4 1 3.4E-05 45.7 10.8 99 48-149 134-238 (429)
254 3kae_A CDC27, possible protein 89.5 5 0.00017 36.5 12.2 95 50-155 38-150 (242)
255 2uy1_A Cleavage stimulation fa 89.4 3.2 0.00011 42.7 12.7 111 46-167 287-398 (493)
256 4g26_A Pentatricopeptide repea 87.3 6.3 0.00022 40.6 13.3 101 60-168 85-190 (501)
257 1zbp_A Hypothetical protein VP 86.3 3.2 0.00011 39.9 9.6 61 99-159 11-71 (273)
258 2ff4_A Probable regulatory pro 86.1 2.4 8.1E-05 42.3 9.0 62 45-112 171-232 (388)
259 4b4t_P 26S proteasome regulato 84.8 17 0.00058 36.8 14.8 104 43-148 135-247 (445)
260 2w2u_A Hypothetical P60 katani 84.8 1.9 6.5E-05 34.0 6.0 36 40-75 14-49 (83)
261 3mkq_A Coatomer beta'-subunit; 84.5 10 0.00034 39.9 13.5 27 45-71 681-707 (814)
262 2v6y_A AAA family ATPase, P60 83.5 1.9 6.6E-05 33.8 5.5 34 41-74 7-40 (83)
263 1wfd_A Hypothetical protein 15 80.4 2.8 9.6E-05 33.6 5.5 35 41-75 11-45 (93)
264 3mkq_A Coatomer beta'-subunit; 80.0 6 0.0002 41.7 9.6 26 84-111 682-707 (814)
265 2cpt_A SKD1 protein, vacuolar 80.0 3.1 0.0001 35.0 5.8 34 41-74 14-47 (117)
266 1wjn_A Tubulin-folding protein 79.8 2.7 9.2E-05 33.5 5.3 79 261-342 9-94 (97)
267 4b6w_A Tubulin-specific chaper 79.5 3.7 0.00013 32.3 5.9 66 275-342 19-85 (86)
268 4fhn_B Nucleoporin NUP120; pro 79.0 9.8 0.00033 43.3 11.5 93 49-143 846-962 (1139)
269 2v6x_A Vacuolar protein sortin 78.6 3.6 0.00012 32.2 5.5 34 41-74 9-42 (85)
270 3mkq_B Coatomer subunit alpha; 76.6 37 0.0013 30.4 12.4 81 45-144 34-114 (177)
271 3mkr_B Coatomer subunit alpha; 75.5 47 0.0016 32.6 13.7 118 48-166 105-244 (320)
272 4h7y_A Dual specificity protei 75.5 2.9 9.8E-05 37.1 4.5 86 73-165 7-106 (161)
273 3mv2_A Coatomer subunit alpha; 72.7 72 0.0025 31.3 14.2 106 48-155 117-243 (325)
274 2jxx_A Nfatc2-interacting prot 69.9 12 0.0004 30.3 6.6 62 258-322 22-87 (97)
275 4b4t_S RPN3, 26S proteasome re 69.5 7.3 0.00025 40.9 6.6 68 82-153 230-304 (523)
276 4a5x_A MITD1, MIT domain-conta 69.1 7.1 0.00024 30.8 5.1 32 43-74 14-45 (86)
277 2kj6_A Tubulin folding cofacto 67.6 25 0.00086 28.1 8.2 81 260-342 13-97 (97)
278 2ijq_A Hypothetical protein; s 67.5 16 0.00056 32.3 7.6 67 47-113 34-103 (161)
279 2cfu_A SDSA1; SDS-hydrolase, l 67.0 13 0.00044 39.9 8.2 53 120-172 450-502 (658)
280 3spa_A Mtrpol, DNA-directed RN 66.3 55 0.0019 37.4 13.2 100 47-153 129-237 (1134)
281 3txn_A 26S proteasome regulato 62.6 38 0.0013 34.0 10.2 104 44-148 18-128 (394)
282 1t0y_A Tubulin folding cofacto 61.1 31 0.0011 28.5 7.9 81 261-344 6-90 (122)
283 1v6e_A Cytoskeleton-associated 60.6 22 0.00076 27.9 6.6 81 259-342 5-89 (95)
284 2eel_A Cell death activator CI 60.4 22 0.00074 28.5 6.4 56 259-320 7-64 (91)
285 1ef1_A Moesin; membrane, FERM 60.1 24 0.00083 33.2 8.0 55 261-315 1-57 (294)
286 2cwy_A Hypothetical protein TT 59.5 16 0.00054 29.3 5.5 63 49-113 5-67 (94)
287 2crb_A Nuclear receptor bindin 59.4 16 0.00055 29.5 5.4 34 41-74 11-44 (97)
288 1qsa_A Protein (soluble lytic 58.2 31 0.0011 36.7 9.1 49 99-147 299-347 (618)
289 1xg8_A Hypothetical protein SA 58.1 7.9 0.00027 32.0 3.4 59 267-327 12-74 (111)
290 4b4t_S RPN3, 26S proteasome re 56.9 1.2E+02 0.0041 31.6 13.1 110 45-163 270-388 (523)
291 2k8h_A Small ubiquitin protein 56.3 26 0.00088 28.9 6.4 72 259-338 24-98 (110)
292 3a4r_A Nfatc2-interacting prot 55.3 25 0.00086 26.8 5.9 59 260-321 6-68 (79)
293 3ax2_A Mitochondrial import re 54.0 34 0.0012 26.2 6.3 33 47-79 19-51 (73)
294 2vkj_A TM1634; membrane protei 53.7 41 0.0014 27.0 6.8 52 43-95 51-102 (106)
295 2wpv_A GET4, UPF0363 protein Y 53.0 1.6E+02 0.0055 28.4 12.6 101 43-143 31-158 (312)
296 3lpz_A GET4 (YOR164C homolog); 50.7 1.9E+02 0.0065 28.3 12.9 36 42-77 32-68 (336)
297 3kae_A CDC27, possible protein 49.8 1.5E+02 0.0052 26.9 13.3 72 44-117 61-146 (242)
298 1qsa_A Protein (soluble lytic 49.4 35 0.0012 36.4 7.7 119 48-169 217-335 (618)
299 3tix_A Ubiquitin-like protein 48.7 11 0.00038 34.6 3.2 74 259-340 55-130 (207)
300 3mkq_B Coatomer subunit alpha; 48.5 58 0.002 29.1 7.9 81 51-142 11-99 (177)
301 4fhn_B Nucleoporin NUP120; pro 48.5 73 0.0025 36.1 10.6 92 52-153 819-934 (1139)
302 2kjr_A CG11242; UBL, ubiquitin 47.9 92 0.0031 24.5 8.3 55 257-312 11-69 (95)
303 4b4t_P 26S proteasome regulato 47.7 95 0.0032 31.2 10.4 69 44-114 176-247 (445)
304 2i1j_A Moesin; FERM, coiled-co 47.6 38 0.0013 35.7 7.7 56 260-315 3-60 (575)
305 3ax2_A Mitochondrial import re 47.3 49 0.0017 25.3 6.2 39 123-161 21-59 (73)
306 3myv_A SUSD superfamily protei 46.3 50 0.0017 33.3 8.1 44 105-148 168-219 (454)
307 4gq2_M Nucleoporin NUP120; bet 45.5 58 0.002 36.3 9.1 94 51-154 816-933 (950)
308 2pmr_A Uncharacterized protein 45.3 42 0.0014 26.6 5.7 38 34-71 28-65 (87)
309 2eke_C Ubiquitin-like protein 45.3 18 0.0006 29.7 3.7 61 258-321 28-90 (106)
310 1om2_A Protein (mitochondrial 43.9 64 0.0022 26.0 6.7 34 45-78 20-53 (95)
311 1wia_A Hypothetical ubiquitin- 43.8 55 0.0019 25.3 6.3 45 260-306 6-51 (95)
312 2crb_A Nuclear receptor bindin 43.8 29 0.00099 28.0 4.5 24 122-145 18-41 (97)
313 1wy6_A Hypothetical protein ST 42.7 1.1E+02 0.0037 26.9 8.3 34 115-148 121-154 (172)
314 2io0_B Small ubiquitin-related 42.5 25 0.00086 27.8 4.1 71 260-338 4-77 (91)
315 3kez_A Putative sugar binding 42.1 59 0.002 32.8 7.9 52 89-148 166-225 (461)
316 1tif_A IF3-N, translation init 42.0 15 0.00051 28.7 2.5 44 301-351 15-59 (78)
317 1v86_A DNA segment, CHR 7, way 42.0 35 0.0012 26.7 4.9 47 260-306 16-63 (95)
318 4b4t_R RPN7, 26S proteasome re 41.8 58 0.002 32.6 7.7 63 84-148 132-197 (429)
319 3lew_A SUSD-like carbohydrate 41.3 64 0.0022 32.9 8.1 30 119-148 203-232 (495)
320 2o8p_A 14-3-3 domain containin 41.2 88 0.003 29.1 8.1 57 56-114 136-197 (227)
321 4gq2_M Nucleoporin NUP120; bet 40.3 1.2E+02 0.004 33.8 10.5 50 91-146 818-867 (950)
322 2cfu_A SDSA1; SDS-hydrolase, l 40.2 36 0.0012 36.4 6.1 50 86-137 452-501 (658)
323 2oo2_A Hypothetical protein AF 40.1 45 0.0015 26.4 5.1 33 39-71 29-61 (86)
324 2kzr_A Ubiquitin thioesterase 39.9 42 0.0014 25.6 5.0 43 263-305 2-46 (86)
325 3qij_A Protein 4.1; cytoskelet 39.5 39 0.0013 32.1 5.7 68 254-321 10-80 (296)
326 3t5v_B Nuclear mRNA export pro 39.4 76 0.0026 32.5 8.1 91 60-152 141-254 (455)
327 1hyw_A GPW, head-TO-tail joini 39.2 76 0.0026 23.9 6.1 42 283-327 7-50 (68)
328 3mcx_A SUSD superfamily protei 38.2 59 0.002 32.9 7.2 45 105-149 180-232 (477)
329 2i1s_A Hypothetical protein; m 38.1 77 0.0026 28.1 7.1 41 259-299 6-50 (188)
330 2bwf_A Ubiquitin-like protein 37.8 70 0.0024 23.1 5.8 45 262-306 5-50 (77)
331 3ivf_A Talin-1; FERM domain, c 37.0 48 0.0016 32.4 6.1 48 260-307 2-54 (371)
332 2daf_A FLJ35834 protein; hypot 36.5 1.1E+02 0.0039 25.5 7.3 83 258-347 12-97 (118)
333 2pjh_A Protein NPL4, nuclear p 36.1 29 0.00098 26.7 3.4 43 262-304 5-48 (80)
334 2rpa_A Katanin P60 ATPase-cont 35.3 95 0.0033 24.0 6.2 48 122-169 15-68 (78)
335 2cpt_A SKD1 protein, vacuolar 34.9 68 0.0023 26.6 5.7 23 135-157 41-63 (117)
336 2kd0_A LRR repeats and ubiquit 34.0 99 0.0034 23.5 6.3 45 261-305 12-57 (85)
337 1wxv_A BAG-family molecular ch 33.4 1.1E+02 0.0037 23.3 6.5 46 260-305 6-57 (92)
338 2rpa_A Katanin P60 ATPase-cont 32.7 40 0.0014 26.2 3.6 31 46-76 13-43 (78)
339 3lxu_X Tripeptidyl-peptidase 2 32.7 4.6E+02 0.016 30.6 13.8 48 43-94 1105-1152(1354)
340 3t5x_A PCI domain-containing p 32.4 89 0.0031 28.1 6.6 92 43-144 12-107 (203)
341 1wx8_A Riken cDNA 4931431F19; 32.4 1.1E+02 0.0038 23.5 6.4 47 259-305 15-62 (96)
342 2jpu_A ORF C02003 protein; sol 32.2 41 0.0014 28.6 4.0 33 42-74 4-36 (129)
343 2br9_A 14-3-3E, 14-3-3 protein 31.8 78 0.0027 29.5 6.2 49 62-112 147-200 (234)
344 2yhe_A SEC-alkyl sulfatase; hy 37.7 10 0.00034 41.0 0.0 52 121-172 463-514 (668)
345 1v5t_A 8430435I17RIK protein; 31.3 59 0.002 25.0 4.6 43 261-303 7-51 (90)
346 4dwf_A HLA-B-associated transc 31.3 1.1E+02 0.0037 23.1 6.2 46 260-305 4-51 (90)
347 2v6y_A AAA family ATPase, P60 30.7 54 0.0018 25.4 4.2 19 135-153 34-52 (83)
348 2w2u_A Hypothetical P60 katani 30.6 48 0.0017 25.7 3.9 18 136-153 43-60 (83)
349 1wh3_A 59 kDa 2'-5'-oligoadeny 30.3 1.7E+02 0.0057 21.7 7.5 47 260-306 6-54 (87)
350 1f2r_I Inhibitor of caspase-ac 30.1 81 0.0028 25.6 5.2 57 258-320 15-75 (100)
351 3n3k_B Ubiquitin; hydrolase, p 30.1 63 0.0022 23.9 4.5 45 262-306 4-50 (85)
352 1wgg_A Ubiquitin carboxyl-term 30.0 84 0.0029 24.6 5.4 44 261-304 7-52 (96)
353 2kvz_A ISPE; structural genomi 29.8 40 0.0014 26.5 3.3 20 294-313 3-22 (85)
354 3snx_A SUSD homolog, putative 29.8 1.1E+02 0.0036 31.0 7.4 27 121-147 193-219 (460)
355 1om2_A Protein (mitochondrial 29.7 66 0.0022 25.9 4.6 39 123-161 24-62 (95)
356 3qnk_A Putative lipoprotein; a 29.7 1.2E+02 0.0041 31.0 7.9 32 117-148 180-211 (517)
357 3mtn_B UBA80, ubcep1, ubiquiti 29.6 85 0.0029 23.1 5.1 45 262-306 4-50 (85)
358 3kyd_D Small ubiquitin-related 29.5 46 0.0016 27.7 3.8 72 259-338 38-112 (115)
359 3hdx_A SUSD homolog, SUSD supe 29.4 1.3E+02 0.0045 30.3 8.1 51 61-113 156-225 (478)
360 3msv_A Nuclear import adaptor, 29.1 4.1E+02 0.014 25.9 11.8 122 46-167 67-214 (393)
361 2dzi_A Ubiquitin-like protein 28.5 1.7E+02 0.0057 21.2 6.8 45 261-305 7-53 (81)
362 3spa_A Mtrpol, DNA-directed RN 28.4 3.5E+02 0.012 30.9 11.7 75 83-159 127-207 (1134)
363 2npm_A 14-3-3 domain containin 28.2 97 0.0033 29.4 6.2 50 62-113 173-226 (260)
364 2pm7_A Protein WEB1, protein t 27.9 2.3E+02 0.008 28.2 9.4 112 47-168 250-382 (399)
365 1o9d_A 14-3-3-like protein C; 27.9 98 0.0034 29.3 6.2 48 62-111 152-204 (260)
366 2dl1_A Spartin; SPG20, MIT, st 27.9 26 0.00087 29.4 1.9 43 100-150 18-60 (116)
367 3a9j_A Ubiquitin; protein comp 27.8 1.2E+02 0.0041 21.5 5.6 42 264-305 3-46 (76)
368 3lew_A SUSD-like carbohydrate 27.7 1.3E+02 0.0043 30.7 7.6 14 83-96 119-132 (495)
369 3rui_B Autophagy-related prote 27.6 67 0.0023 26.8 4.5 25 271-295 47-71 (118)
370 3iqu_A 14-3-3 protein sigma; s 27.5 1E+02 0.0035 28.8 6.2 49 62-112 150-203 (236)
371 3myv_A SUSD superfamily protei 27.5 83 0.0028 31.6 6.1 14 83-96 111-124 (454)
372 1o3u_A Conserved hypothetical 27.4 2.2E+02 0.0074 23.5 7.8 34 42-75 13-46 (135)
373 4fxv_A ELAV-like protein 1; RN 27.3 1.6E+02 0.0056 22.6 6.6 54 271-326 19-80 (99)
374 3kez_A Putative sugar binding 26.9 1.3E+02 0.0043 30.3 7.4 19 153-171 196-214 (461)
375 3uzd_A 14-3-3 protein gamma; s 26.4 1.1E+02 0.0038 28.8 6.2 48 62-111 148-200 (248)
376 2xze_A STAM-binding protein; h 26.3 91 0.0031 26.8 5.3 43 38-80 33-79 (146)
377 4a5x_A MITD1, MIT domain-conta 25.8 2.1E+02 0.0072 22.1 6.9 21 126-146 23-43 (86)
378 1j8c_A Ubiquitin-like protein 25.7 1.5E+02 0.0053 24.3 6.5 46 260-305 31-77 (125)
379 2dzm_A FAS-associated factor 1 25.3 97 0.0033 24.8 4.9 36 260-295 8-43 (100)
380 2cpz_A CUG triplet repeat RNA- 25.1 2E+02 0.0069 22.3 6.9 49 277-326 33-86 (115)
381 2ijq_A Hypothetical protein; s 25.1 2.8E+02 0.0094 24.2 8.2 58 89-148 38-104 (161)
382 1wfd_A Hypothetical protein 15 24.9 87 0.003 24.7 4.5 18 136-153 39-56 (93)
383 1wx7_A Ubiquilin 3; ubiquitin- 24.7 1.7E+02 0.0059 22.9 6.4 47 259-305 15-62 (106)
384 2zjd_A Microtubule-associated 24.4 47 0.0016 28.2 3.0 36 271-306 53-90 (130)
385 2dl1_A Spartin; SPG20, MIT, st 24.3 2E+02 0.0069 23.9 6.7 44 60-117 18-61 (116)
386 3jq1_A SUSD superfamily protei 24.3 1E+02 0.0036 31.2 6.2 52 88-147 149-208 (481)
387 2dhg_A TRNA selenocysteine ass 23.9 2E+02 0.0069 21.7 6.6 49 277-326 17-70 (104)
388 2klc_A Ubiquilin-1; ubiquitin- 23.8 1.7E+02 0.0059 22.8 6.2 46 260-305 24-70 (101)
389 1whv_A Poly(A)-specific ribonu 23.7 1.4E+02 0.0048 24.2 5.5 60 272-335 18-77 (100)
390 3pge_A SUMO-modified prolifera 23.6 50 0.0017 30.1 3.2 74 259-340 27-102 (200)
391 3ubw_A 14-3-3E, 14-3-3 protein 23.3 1.4E+02 0.0046 28.4 6.2 49 62-112 173-226 (261)
392 1wm3_A Ubiquitin-like protein 22.8 1.4E+02 0.0049 21.8 5.2 51 262-315 2-54 (72)
393 2zan_A Vacuolar protein sortin 22.6 18 0.00062 36.5 0.0 36 41-76 7-42 (444)
394 1ndd_A NEDD8, protein (ubiquit 22.6 1.8E+02 0.006 20.6 5.7 42 264-305 3-46 (76)
395 3t5x_A PCI domain-containing p 22.3 2.9E+02 0.01 24.6 8.2 54 81-136 12-70 (203)
396 3h9d_A ATG8, microtubule-assoc 22.0 86 0.0029 26.1 4.1 24 271-294 48-71 (119)
397 1v5o_A 1700011N24RIK protein; 22.0 1.6E+02 0.0054 23.0 5.6 45 262-306 10-58 (102)
398 3i4g_A SUSD-like carbohydrate 21.9 2E+02 0.0069 29.5 7.9 31 117-147 196-226 (528)
399 1wy6_A Hypothetical protein ST 21.7 2.4E+02 0.0084 24.6 6.9 62 48-115 93-155 (172)
400 3v6c_B Ubiquitin; structural g 21.6 1.5E+02 0.0052 22.4 5.3 48 259-306 15-64 (91)
401 1wol_A ST0689, 122AA long cons 21.5 1.8E+02 0.0061 23.4 6.0 36 39-74 5-40 (122)
402 3phx_B Ubiquitin-like protein 21.5 1.9E+02 0.0066 20.9 5.8 45 262-306 5-51 (79)
403 3mcx_A SUSD superfamily protei 21.4 97 0.0033 31.2 5.2 20 153-172 202-221 (477)
404 1wz0_A Ubiquitin-like protein 21.2 1.7E+02 0.0058 23.5 5.7 59 259-320 22-83 (104)
405 4b4t_O 26S proteasome regulato 21.0 5.9E+02 0.02 24.8 11.4 93 54-148 85-198 (393)
406 1wy8_A NP95-like ring finger p 21.0 2E+02 0.0067 21.4 5.8 45 261-305 7-55 (89)
407 3efz_A 14-3-3 protein; 14-3-3, 20.9 1.2E+02 0.0041 28.9 5.4 15 132-146 210-224 (268)
408 4hcn_B Polyubiquitin, ubiquiti 20.9 1.3E+02 0.0046 23.2 4.9 46 261-306 22-69 (98)
409 1v2y_A 3300001G02RIK protein; 20.9 1.1E+02 0.0036 24.9 4.3 34 262-295 8-42 (105)
410 1yx5_B Ubiquitin; proteasome, 20.8 2.5E+02 0.0085 21.4 6.5 37 269-305 9-46 (98)
411 3dbh_I NEDD8; cell cycle, acti 20.7 1.6E+02 0.0055 21.8 5.2 47 260-306 11-59 (88)
412 1uh6_A Ubiquitin-like 5; beta- 20.5 2.1E+02 0.0073 22.9 6.1 50 256-305 23-74 (100)
413 3ivf_A Talin-1; FERM domain, c 20.5 1.6E+02 0.0053 28.7 6.4 52 258-309 82-136 (371)
414 2l32_A Small archaeal modifier 20.4 63 0.0022 24.4 2.7 30 261-291 2-31 (74)
415 1wf9_A NPL4 family protein; be 20.2 1.6E+02 0.0054 23.4 5.3 43 262-304 8-52 (107)
416 4eew_A Large proline-rich prot 20.0 2.2E+02 0.0076 21.1 5.9 46 260-305 16-63 (88)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.85 E-value=3.1e-20 Score=158.75 Aligned_cols=115 Identities=31% Similarity=0.499 Sum_probs=110.1
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKAL 122 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl 122 (429)
+.|..++++|+.||+.|+|++|+..|++||+++|.+.. +|.++|.||+++ |+|++|+.+|++||+++|+++.+|
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~~~~~~~~~--~~~~~A~~~~~~al~~~p~~~~a~ 84 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAI----LYSNRAACLTKL--MEFQRALDDCDTCIRLDSKFIKGY 84 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHhhHHHhh--ccHHHHHHHHHHHHHhhhhhhHHH
Confidence 34678999999999999999999999999999999885 999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVK 163 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~ 163 (429)
+++|.+|..+|++++|+.+|+++++++|++..++..++.++
T Consensus 85 ~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 85 IRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 99999999999999999999999999999999999988764
No 2
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.79 E-value=7.8e-19 Score=153.75 Aligned_cols=129 Identities=25% Similarity=0.342 Sum_probs=116.0
Q ss_pred HhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCC------ccHHHHHHHHHHHHHHcCCCCHHHHHHH
Q 014213 42 IGMSQELKEEGNKLFQKRDHGGALLKYEKALKL--------LPRNH------IDVSYLRSNMAACYMQMGLSEYPRAIHE 107 (429)
Q Consensus 42 l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel--------~P~~~------~~~a~l~~nrA~~y~kl~~g~y~eAi~~ 107 (429)
++.+..++++|+.+|+.|+|++|+..|.+||.+ .|.+. +....+|+|+|.||+++ |+|++|+.+
T Consensus 8 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~--~~~~~A~~~ 85 (162)
T 3rkv_A 8 LKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNI--GDLHEAEET 85 (162)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHH--TCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhc--CcHHHHHHH
Confidence 477899999999999999999999999999999 33321 12346999999999999 999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHHhhccc
Q 014213 108 CNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNI-MAAEIAERVKKELEKRGLR 172 (429)
Q Consensus 108 ~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~-~a~~~La~l~~~l~e~~~a 172 (429)
|++||+++|.++.+|+++|.+|..+|++++|+.+|++++.++|++. .+...+..+...+.+....
T Consensus 86 ~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~ 151 (162)
T 3rkv_A 86 SSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKAD 151 (162)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 7888999998888665443
No 3
>2kkc_A Sequestosome-1; P62, PB1, autophagy, ubiquitin-proteasome system, NF-KB signaling, alternative splicing, apoptosis, cytoplasm, differentiation; NMR {Rattus norvegicus} PDB: 2ktr_B
Probab=99.79 E-value=4.4e-19 Score=148.30 Aligned_cols=78 Identities=28% Similarity=0.424 Sum_probs=70.9
Q ss_pred ceeEEEEe------CCceEEEEccCC-----------ccHHHHHHHHHhhCCCCCc--eEEEEECCCCCEEEecChHHHH
Q 014213 261 KKTVKLVF------GEDIRVAQLPLN-----------SSLLQLREVISDRFPSCRA--VLIKYRDEEGDLVTITTDEELR 321 (429)
Q Consensus 261 ~~~vK~~~------~~DiR~~~i~~~-----------~~~~~L~~~v~~kf~~~~~--~~iky~DedgDliti~~~~dl~ 321 (429)
.++||+.+ +.|||||.++.+ .+|.+|+++|++.||.+.+ |+|+|+|+|||||||+||+||.
T Consensus 5 ~~~vKayl~~~~~~~~EiRRF~l~~~~~p~~~~~~~~~s~~~L~~~V~~lFp~l~~~~f~l~Y~DedGDlItiSsDeEL~ 84 (102)
T 2kkc_A 5 SLTVKAYLLGKEEAAREIRRFSFCFSPEPEAEAAAGPGPCERLLSRVAVLFPALRPGGFQAHYRAERGDLVAFSSDEELT 84 (102)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEESSSCSCSSSCCSCCHHHHHHHHHHHHCTTSCSSCEEEEEECTTCCEEEECSHHHHH
T ss_pred eEEEEEEEccCCCCCCceEEEEeccCCCcccccccccccHHHHHHHHHHHccccCCCcEEEEEECCCCCEEEecCHHHHH
Confidence 68999999 579999999753 4899999999999987765 9999999999999999999999
Q ss_pred HHHHhhccCCcEEEEEEe
Q 014213 322 WAEASAEMQGSVRLFVVG 339 (429)
Q Consensus 322 ~a~~~~~~~~~~rl~v~e 339 (429)
+|++++. .+.+||||++
T Consensus 85 ~Al~~~~-~~~lRlyVke 101 (102)
T 2kkc_A 85 MAMSYVK-DDIFRIYIKE 101 (102)
T ss_dssp HHHHHCC-SSEEEEEEEE
T ss_pred HHHHhcC-CCeEEEEEEc
Confidence 9999976 7799999986
No 4
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.77 E-value=9.9e-19 Score=157.97 Aligned_cols=125 Identities=14% Similarity=0.098 Sum_probs=115.0
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc--------cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI--------DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV 114 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~--------~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel 114 (429)
.+|..+++.|+.+|+.|+|++|+..|++||+++|.++. ..+.+|+|+|.|+.++ |+|++|+.+|++||++
T Consensus 9 ~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~L--gr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 9 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGL--RSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHh
Confidence 67899999999999999999999999999999998421 1245999999999999 9999999999999999
Q ss_pred -------CCCCHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhh
Q 014213 115 -------TPLYSKAL----LKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKR 169 (429)
Q Consensus 115 -------dP~~~kAl----~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~ 169 (429)
+|++.++| +++|.+|..+|++++|+.+|++|+.++|++..+...+..++..+.+.
T Consensus 87 ~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~ 152 (159)
T 2hr2_A 87 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDR 152 (159)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHH
T ss_pred hhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999999999999999999999888888888877543
No 5
>2ktr_A Sequestosome-1; autophagy, NF-KB signaling, HOMO-oligomer, PB1 dimer, signaling protein, transport protein; NMR {Rattus norvegicus}
Probab=99.77 E-value=1.8e-18 Score=147.51 Aligned_cols=81 Identities=27% Similarity=0.376 Sum_probs=71.4
Q ss_pred CCCceeEEEEeC------CceEEEEccCC-----------ccHHHHHHHHHhhCCCCCc--eEEEEECCCCCEEEecChH
Q 014213 258 NEPKKTVKLVFG------EDIRVAQLPLN-----------SSLLQLREVISDRFPSCRA--VLIKYRDEEGDLVTITTDE 318 (429)
Q Consensus 258 ~~~~~~vK~~~~------~DiR~~~i~~~-----------~~~~~L~~~v~~kf~~~~~--~~iky~DedgDliti~~~~ 318 (429)
.+-+++||+.+. .|||||.++.+ .+|.+|+++|++.||.+++ |+|+|+|+|||||||+||+
T Consensus 17 ~~~~l~vKayl~~~~~~~~EIRRF~l~~~~~p~~~~~~~~~s~~~L~~kV~~lFp~L~~~~f~l~YkDEdGDlItISsDe 96 (117)
T 2ktr_A 17 HMGSLTVKAYLLGKEEAAREIRRFSFCFSPEPEAEAAAGPGPSERLLSRVAVLFPALRPGGFQAHYRAERGDLVAFSSDE 96 (117)
T ss_dssp ---CEEEEEEEECSSSCEEEEEEEEECSSSCSCSSSCCSCCHHHHHHHHHHHHCTTSCSSCEEEEEECTTCCEEEECSHH
T ss_pred ccccEEEEEEEecCCCCCCcEEEEEeccCCCccccccccCCCHHHHHHHHHHHccccCCCcEEEEEECCCCCEEEecCHH
Confidence 356799999995 79999999754 3999999999999987765 9999999999999999999
Q ss_pred HHHHHHHhhccCCcEEEEEEe
Q 014213 319 ELRWAEASAEMQGSVRLFVVG 339 (429)
Q Consensus 319 dl~~a~~~~~~~~~~rl~v~e 339 (429)
||.||++++. .+.+||||++
T Consensus 97 EL~~Al~~~~-~~~lRlyVke 116 (117)
T 2ktr_A 97 ELTMAMSYVK-DDIFRIYIKE 116 (117)
T ss_dssp HHHHHHHHCC-SSEEEEEEEE
T ss_pred HHHHHHHhcC-CCeEEEEEEe
Confidence 9999999976 6789999986
No 6
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.76 E-value=1.5e-17 Score=139.10 Aligned_cols=117 Identities=23% Similarity=0.368 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALL 123 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~ 123 (429)
.+..+++.|+.++..|+|++|+..|+++|+++|.+.. +|.++|.||+.+ |+|++|+..|+++++++|+++.+|+
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~~a~~~~~~--~~~~~A~~~~~~al~~~p~~~~~~~ 76 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDAR----GYSNRAAALAKL--MSFPEAIADCNKAIEKDPNFVRAYI 76 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChH----HHHHHHHHHHHh--cCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 4678999999999999999999999999999999875 999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHH
Q 014213 124 KRARCYEALNRLDLAFRDVTTVLNKE------PKNIMAAEIAERVKKEL 166 (429)
Q Consensus 124 ~rA~ay~~LG~~deAl~~~~kAL~l~------P~n~~a~~~La~l~~~l 166 (429)
++|.+|..+|++++|+.+|++++.++ |++..++..+..+...+
T Consensus 77 ~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 77 RKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999 99999999999887653
No 7
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.75 E-value=1.8e-17 Score=141.27 Aligned_cols=115 Identities=23% Similarity=0.342 Sum_probs=103.3
Q ss_pred HHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC--
Q 014213 41 FIGMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY-- 118 (429)
Q Consensus 41 ~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~-- 118 (429)
..+.|..++++|+.+|+.|+|++|+..|++||+++|.+.. +|+|+|.||+.+ |+|++|+.+|++||+++|++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~----~~~nlg~~~~~~--~~~~~A~~~~~~al~~~~~~~~ 77 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNIT----FYNNKAAVYFEE--KKFAECVQFCEKAVEVGRETRA 77 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHhHHHHHHHh--hhHHHHHHHHHHHHHhCcccch
Confidence 3467889999999999999999999999999999999874 999999999999 99999999999999999875
Q ss_pred -----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 014213 119 -----SKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERV 162 (429)
Q Consensus 119 -----~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l 162 (429)
..+|+++|.+|..+|++++|+.+|+++|.+.|+ +.....+..+
T Consensus 78 ~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~l 125 (127)
T 4gcn_A 78 DYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKEL 125 (127)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHh
Confidence 468999999999999999999999999999885 5555554443
No 8
>1q1o_A Cell division control protein 24; PB1 domain, PCCR, PC motif, OPCA motif, yeast, cell polarity, protein-protein interaction; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 2kfj_A 2kfk_B
Probab=99.75 E-value=2.1e-18 Score=142.51 Aligned_cols=77 Identities=18% Similarity=0.273 Sum_probs=69.9
Q ss_pred ceeEEEEeC--------CceEEEEccCCccHHHHHHHHHhhCCCC------CceEEEEECCCCCEEEecChHHHHHHHHh
Q 014213 261 KKTVKLVFG--------EDIRVAQLPLNSSLLQLREVISDRFPSC------RAVLIKYRDEEGDLVTITTDEELRWAEAS 326 (429)
Q Consensus 261 ~~~vK~~~~--------~DiR~~~i~~~~~~~~L~~~v~~kf~~~------~~~~iky~DedgDliti~~~~dl~~a~~~ 326 (429)
.+.|||+|+ +|+|.++||.+++|.+|.++|++||... +.++|||+|||||+|||.||+||+||+++
T Consensus 5 sikVKv~y~~~~~~~~~~d~~~i~V~~~i~f~~L~~kI~~Kl~~~~~~~i~~~~klkYkDEdGD~Vtl~sddDl~~A~e~ 84 (98)
T 1q1o_A 5 SILFRISYNNNSNNTSSSEIFTLLVEKVWNFDDLIMAINSKISNTHNNNISPITKIKYQDEDGDFVVLGSDEDWNVAKEM 84 (98)
T ss_dssp CEEEEEEECSSCSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHCSSCCCCCCCEEEECSSSCEEEECSHHHHHHHHHH
T ss_pred cEEEEEEecCcccccccCcEEEEEecCCCCHHHHHHHHHHHHcCCccccccceeEEEEEcCCCCEEEEcCHHHHHHHHHH
Confidence 489999999 8899999999999999999999999532 56899999999999999999999999998
Q ss_pred hcc--CCcEEEEE
Q 014213 327 AEM--QGSVRLFV 337 (429)
Q Consensus 327 ~~~--~~~~rl~v 337 (429)
+++ .|.|+|||
T Consensus 85 ~~e~~~~~l~Iwv 97 (98)
T 1q1o_A 85 LAENNEKFLNIRL 97 (98)
T ss_dssp HHHTTCCEEEEEE
T ss_pred HHhhhcCeEEEEE
Confidence 643 58899998
No 9
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=99.73 E-value=1.6e-17 Score=135.55 Aligned_cols=80 Identities=24% Similarity=0.263 Sum_probs=71.3
Q ss_pred CCceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCCC--CceEEEEECCCCCEEEecChHHHHHHHHhhcc--CCcEE
Q 014213 259 EPKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPSC--RAVLIKYRDEEGDLVTITTDEELRWAEASAEM--QGSVR 334 (429)
Q Consensus 259 ~~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~~--~~~~iky~DedgDliti~~~~dl~~a~~~~~~--~~~~r 334 (429)
...++||++|.+|||++.+|.+++|.+|.++|++.|+.. .+|+|||+|||||+|||+||+||.+|+.+... ...+.
T Consensus 4 ~~~vkvK~~~~gdi~~~~v~~~i~~~~L~~kv~~~~~~~~~~~f~lky~DEeGD~itisSd~EL~eAl~l~~~n~~~~l~ 83 (89)
T 1vd2_A 4 GSQVRVKAYYRGDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCTVSSQLELEEAFRLYELNKDSELL 83 (89)
T ss_dssp SSCEEEEEESSSCEEEEEECTTCCHHHHHHHHHHHTTCCSSCCEEEEECCSSSCCEECCSHHHHHHHHHHHHHTSCCCEE
T ss_pred CCeEEEEEEeCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCeEEEEEECCCCCcccccCHHHHHHHHHHHHccCCCCEE
Confidence 346899999999999999999999999999999999764 66999999999999999999999999998743 34577
Q ss_pred EEEE
Q 014213 335 LFVV 338 (429)
Q Consensus 335 l~v~ 338 (429)
|+|.
T Consensus 84 ihvf 87 (89)
T 1vd2_A 84 IHVF 87 (89)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7775
No 10
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.73 E-value=7.7e-17 Score=141.24 Aligned_cols=122 Identities=26% Similarity=0.278 Sum_probs=112.2
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKAL 122 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl 122 (429)
..+..+...|+.++..|+|++|+..|+++|+++|.+.. +|+++|.||+.+ |+|++|+..|+++++++|++..+|
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~l~~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~ 82 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPI----YLSNRAAAYSAS--GQHEKAAEDAELATVVDPKYSKAW 82 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHH----HHHHHHHHHHHc--cCHHHHHHHHHHHHHhCCCCHHHH
Confidence 34678999999999999999999999999999999874 999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH--HHHHHHHHHHHHHhhc
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNIM--AAEIAERVKKELEKRG 170 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~--a~~~La~l~~~l~e~~ 170 (429)
+++|.+|..+|++++|+.+|++++.++|++.. ....+..++..+.+..
T Consensus 83 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~ 132 (164)
T 3sz7_A 83 SRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEAN 132 (164)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999977 6666677777776543
No 11
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.71 E-value=5.5e-16 Score=139.90 Aligned_cols=143 Identities=23% Similarity=0.321 Sum_probs=125.2
Q ss_pred CCCCCCCCCchhHHHHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCcc------------HHHHHHHHHHHHH
Q 014213 27 GEHSPKSYDKDTEVFIGMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHID------------VSYLRSNMAACYM 94 (429)
Q Consensus 27 ~~~~~~~~d~d~~~~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~------------~a~l~~nrA~~y~ 94 (429)
.....+.++.+. .+..+..++..|+.++..|+|++|+..|.+|+.+.|.++.. ...++.++|.||+
T Consensus 22 ~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 99 (198)
T 2fbn_A 22 AKKSIYDYTDEE--KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYN 99 (198)
T ss_dssp CCCSGGGCCHHH--HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCchhhCCHHH--HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555444 44889999999999999999999999999999999987610 1258999999999
Q ss_pred HcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcccc
Q 014213 95 QMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRV 173 (429)
Q Consensus 95 kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~ 173 (429)
.+ |+|++|+..|++++.++|++..+++++|.+|..+|++++|+.+|++++.++|++..++..++.++..+++...+.
T Consensus 100 ~~--~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 100 KN--KDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp HT--TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC--
T ss_pred Hh--cCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999987665543
No 12
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.70 E-value=4e-16 Score=138.52 Aligned_cols=104 Identities=13% Similarity=0.053 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALL 123 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~ 123 (429)
.+..+...|..+++.|+|++|+..|++++.++|.++. +|.++|.||..+ |+|++|+..|++|+.++|+++.+|+
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~----~~~~lg~~~~~~--g~~~~Ai~~~~~al~l~P~~~~~~~ 108 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVD----YIMGLAAIYQIK--EQFQQAADLYAVAFALGKNDYTPVF 108 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHSSSCCHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHH--ccHHHHHHHHHHHHhhCCCCcHHHH
Confidence 3467999999999999999999999999999999985 999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 014213 124 KRARCYEALNRLDLAFRDVTTVLNKEPKNI 153 (429)
Q Consensus 124 ~rA~ay~~LG~~deAl~~~~kAL~l~P~n~ 153 (429)
++|.||..+|++++|+.+|++++.+.|+.+
T Consensus 109 ~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 109 HTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 999999999999999999999999999875
No 13
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.69 E-value=1.5e-16 Score=139.25 Aligned_cols=117 Identities=12% Similarity=0.004 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALL 123 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~ 123 (429)
.+..+...|..|++.|+|++|+..|++||+++|+++. +|.++|.||..+ |++++|+..|+++++++|+++.+|+
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~----a~~~lg~~~~~~--~~~~~A~~~~~~al~~~p~~~~~~~ 103 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPK----AHRFLGLLYELE--ENTDKAVECYRRSVELNPTQKDLVL 103 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHc--CchHHHHHHHHHHHHhCCCCHHHHH
Confidence 3445778999999999999999999999999999885 999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHH-HHHHHHhCCCCHHHHHHHHHHHHHH
Q 014213 124 KRARCYEALNRLDLAFRD-VTTVLNKEPKNIMAAEIAERVKKEL 166 (429)
Q Consensus 124 ~rA~ay~~LG~~deAl~~-~~kAL~l~P~n~~a~~~La~l~~~l 166 (429)
++|.+|..+|++++|... +++|++++|+++.++..++++....
T Consensus 104 ~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~ 147 (150)
T 4ga2_A 104 KIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCE 147 (150)
T ss_dssp HHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHh
Confidence 999999999999887765 5899999999999998888876543
No 14
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.68 E-value=7.8e-16 Score=134.67 Aligned_cols=119 Identities=17% Similarity=0.130 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALL 123 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~ 123 (429)
.+..+...|..++..|+|++|+..|.+++.++|.++. +|.++|.||..+ |+|++|+..|++++.++|+++.+++
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~lg~~~~~~--g~~~~A~~~~~~al~l~p~~~~~~~ 93 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSR----FFLGLGACRQAM--GQYDLAIHSYSYGAVMDIXEPRFPF 93 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHSTTCTHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHH----HHHHHHHHHHHH--hhHHHHHHHHHHHHhcCCCCchHHH
Confidence 3567889999999999999999999999999999885 899999999999 9999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 014213 124 KRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEK 168 (429)
Q Consensus 124 ~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e 168 (429)
++|.+|..+|++++|+..|++++.++|+++.......++...+..
T Consensus 94 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~ 138 (148)
T 2vgx_A 94 HAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLEA 138 (148)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHHH
Confidence 999999999999999999999999999998887777777766654
No 15
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.67 E-value=8.7e-16 Score=132.04 Aligned_cols=118 Identities=16% Similarity=0.120 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..++..|+|++|+..|.+++.++|.+.. +|.++|.||+.+ |+|++|+..|++++.++|+++.+++.
T Consensus 18 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~lg~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~~~ 91 (142)
T 2xcb_A 18 LEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDAR----YFLGLGACRQSL--GLYEQALQSYSYGALMDINEPRFPFH 91 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCTHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHH----HHHHHHHHHHHH--hhHHHHHHHHHHHHhcCCCCcHHHHH
Confidence 456889999999999999999999999999999885 899999999999 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEK 168 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e 168 (429)
+|.+|..+|++++|+..|++++.++|+++.......++...+..
T Consensus 92 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~ 135 (142)
T 2xcb_A 92 AAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEA 135 (142)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888777777766653
No 16
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.67 E-value=1.5e-15 Score=150.37 Aligned_cols=131 Identities=27% Similarity=0.339 Sum_probs=120.5
Q ss_pred HHHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc-----------cHHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 014213 40 VFIGMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI-----------DVSYLRSNMAACYMQMGLSEYPRAIHEC 108 (429)
Q Consensus 40 ~~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~-----------~~a~l~~nrA~~y~kl~~g~y~eAi~~~ 108 (429)
.....+..++..|+.++..|+|++|+..|++||.++|.+.. ..+.+|+|+|.||+++ |+|++|+..|
T Consensus 142 ~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~--g~~~~A~~~~ 219 (336)
T 1p5q_A 142 EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKL--QAFSAAIESC 219 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHc--CCHHHHHHHH
Confidence 34467889999999999999999999999999999998840 1136999999999999 9999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccc
Q 014213 109 NLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLR 172 (429)
Q Consensus 109 ~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a 172 (429)
++||+++|++..+|+++|.+|..+|++++|+.+|++++.++|++..++..++.++..+++...+
T Consensus 220 ~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a 283 (336)
T 1p5q_A 220 NKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAR 283 (336)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998876554
No 17
>1pqs_A Cell division control protein 24; alpha and beta protein, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1tz1_A
Probab=99.66 E-value=6e-17 Score=128.81 Aligned_cols=68 Identities=21% Similarity=0.275 Sum_probs=62.1
Q ss_pred CceEEEEccCCccHHHHHHHHHhhCCCC------CceEEEEECCCCCEEEecChHHHHHHHHhhc--cCCcEEEEE
Q 014213 270 EDIRVAQLPLNSSLLQLREVISDRFPSC------RAVLIKYRDEEGDLVTITTDEELRWAEASAE--MQGSVRLFV 337 (429)
Q Consensus 270 ~DiR~~~i~~~~~~~~L~~~v~~kf~~~------~~~~iky~DedgDliti~~~~dl~~a~~~~~--~~~~~rl~v 337 (429)
.|+|.++||++++|.+|.++|++||... +.++|||+|||||+|||.||+||+||+++++ .+|.|+|||
T Consensus 1 ~D~~~i~V~~~i~f~~L~~kI~~kl~~~~~~~~~~~~~lkYkDEdGD~Vti~sddDl~~A~~~~~~~~~~~leiWv 76 (77)
T 1pqs_A 1 SEIFTLLVEKVWNFDDLIMAINSKISNTHNNNISPITKIKYQDEDGDFVVLGSDEDWNVAKEMLAENNEKFLNIRL 76 (77)
T ss_dssp CCEEEEECTTCCCSHHHHHHHHHHTTTTTSSCSCSTTCCEEEETTTEEEECCSTTHHHHHHHHHHHHCCCEEEEEC
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHcccccccccceeEEEEEcCCCCEEEEcCHHHHHHHHHHHHhhhcCeEEEEE
Confidence 4899999999999999999999999743 7799999999999999999999999999763 368899997
No 18
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.66 E-value=8.5e-16 Score=158.68 Aligned_cols=133 Identities=23% Similarity=0.311 Sum_probs=117.5
Q ss_pred HHHHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc-----------cHHHHHHHHHHHHHHcCCCCHHHHHHH
Q 014213 39 EVFIGMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI-----------DVSYLRSNMAACYMQMGLSEYPRAIHE 107 (429)
Q Consensus 39 ~~~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~-----------~~a~l~~nrA~~y~kl~~g~y~eAi~~ 107 (429)
......+..++++|+.+++.|+|++|+..|.+||.++|.+.. ....+|+|+|.||+++ ++|++|+..
T Consensus 262 ~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~--g~~~~A~~~ 339 (457)
T 1kt0_A 262 KEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKL--REYTKAVEC 339 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHh--cCHHHHHHH
Confidence 334578889999999999999999999999999999998741 1246999999999999 999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcccc
Q 014213 108 CNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRV 173 (429)
Q Consensus 108 ~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~ 173 (429)
|++||+++|++.++|+++|.+|..+|+|++|+.+|++|+.++|++..++..++.++..+++...+.
T Consensus 340 ~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~ 405 (457)
T 1kt0_A 340 CDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERD 405 (457)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999988765443
No 19
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.65 E-value=2.8e-15 Score=125.58 Aligned_cols=118 Identities=26% Similarity=0.339 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..++..|+|++|+..|.+++.++|.+.. +++++|.||+.+ |+|++|+..+++++.++|+++.+++.
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~----~~~~l~~~~~~~--~~~~~A~~~~~~al~~~p~~~~~~~~ 82 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAV----YYTNRALCYLKM--QQPEQALADCRRALELDGQSVKAHFF 82 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHH----HHHHHHHHHHHh--cCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 567999999999999999999999999999999874 999999999999 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHHHHHh
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPK-----NIMAAEIAERVKKELEK 168 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~-----n~~a~~~La~l~~~l~e 168 (429)
+|.+|..+|++++|+..|++++.++|+ +..+...+..+......
T Consensus 83 l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~ 131 (137)
T 3q49_B 83 LGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWN 131 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 78888888887776643
No 20
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.65 E-value=8e-16 Score=168.59 Aligned_cols=148 Identities=16% Similarity=0.184 Sum_probs=131.5
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKAL 122 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl 122 (429)
..+..|.++|+.|.+.|+|++|+..|++||+++|++.. +|+|+|.+|.++ |+|++|+..|++||+++|++..+|
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~----a~~nLg~~l~~~--g~~~eA~~~~~~Al~l~P~~~~a~ 80 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAA----AHSNLASVLQQQ--GKLQEALMHYKEAIRISPTFADAY 80 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCCHHHH
Confidence 45678999999999999999999999999999999885 999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccccc--cccCCCCCCCCCcccccchhhhhh
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVNDT--VIELPPEYVEPPVTSIAPKVVKEK 200 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~e~--~~~L~p~~~~P~~~~~~a~v~k~~ 200 (429)
+++|.+|..+|++++|+.+|++|++++|++..++..++.++..+++...|+... +.++. |..+..+..++...
T Consensus 81 ~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~-----P~~~~a~~~L~~~l 155 (723)
T 4gyw_A 81 SNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLK-----PDFPDAYCNLAHCL 155 (723)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCChHHHhhhhhHH
Confidence 999999999999999999999999999999999999999999999888777744 44454 44445555555444
Q ss_pred h
Q 014213 201 T 201 (429)
Q Consensus 201 ~ 201 (429)
.
T Consensus 156 ~ 156 (723)
T 4gyw_A 156 Q 156 (723)
T ss_dssp H
T ss_pred H
Confidence 3
No 21
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=1.1e-14 Score=122.45 Aligned_cols=116 Identities=36% Similarity=0.519 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..++..|+|++|+..|++++++.|.+. ....++.++|.+|+.+ ++|++|+..|++++.++|++..+++.
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~-~~~~~~~~~a~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~~~ 104 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQ-DQAVLHRNRAACHLKL--EDYDKAETEASKAIEKDGGDVKALYR 104 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHH-HHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccch-HHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHhhCccCHHHHHH
Confidence 46789999999999999999999999999999752 2235899999999999 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVK 163 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~ 163 (429)
+|.+|..+|++++|+..|++++.++|++..++..+..+.
T Consensus 105 ~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 105 RSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 999999999999999999999999999999998888764
No 22
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.64 E-value=9e-15 Score=117.41 Aligned_cols=116 Identities=31% Similarity=0.422 Sum_probs=109.7
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKAL 122 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl 122 (429)
..+..+...|..++..|+|++|+..|++++...|.+.. ++.++|.+|+.+ |+|++|+..+++++.++|.+..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~----~~~~~a~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~ 75 (118)
T 1elw_A 2 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHV----LYSNRSAAYAKK--GDYQKAYEDGCKTVDLKPDWGKGY 75 (118)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHH--TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHH----HHHHHHHHHHhh--ccHHHHHHHHHHHHHhCcccHHHH
Confidence 35678999999999999999999999999999998874 899999999999 999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKK 164 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~ 164 (429)
+.+|.+|..+|++++|+..|++++.++|++..++..++.+..
T Consensus 76 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 76 SRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 999999999999999999999999999999999998887753
No 23
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.64 E-value=3.2e-15 Score=137.05 Aligned_cols=118 Identities=15% Similarity=0.104 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHH----------------HHHHHHHcCCCCHHHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSN----------------MAACYMQMGLSEYPRAIHEC 108 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~n----------------rA~~y~kl~~g~y~eAi~~~ 108 (429)
+..+..+|..++..|+|++|+..|+++++++|.+.. +|++ +|.+|..+ |+|++|+..|
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~~~~~~~~~~~~~~~~~lg~~~~~~--g~~~~A~~~~ 77 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTE----MYYWTNVDKNSEISSKLATELALAYKKN--RNYDKAYLFY 77 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHH----HHHHHHSCTTSHHHHHHHHHHHHHHHHT--TCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChH----HHHHhhhcchhhhhHHHHHHHHHHHHHC--CCHHHHHHHH
Confidence 567889999999999999999999999999998775 7777 99999999 9999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 014213 109 NLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEK 168 (429)
Q Consensus 109 ~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e 168 (429)
+++++++|+++.+|+.+|.+|..+|++++|+.+|++++.++|++..++..++.++...++
T Consensus 78 ~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~ 137 (208)
T 3urz_A 78 KELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAE 137 (208)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999999999999999999999999999999999876654
No 24
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.63 E-value=8e-15 Score=120.78 Aligned_cols=117 Identities=27% Similarity=0.410 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..++..|+|++|+..|++++.+.|.+.. ++.++|.+|+.+ +++++|+..+++++.++|.+..+++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~----~~~~la~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~~~~ 89 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAK----LYSNRAACYTKL--LEFQLALKDCEECIQLEPTFIKGYTR 89 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHH----HHHHHHHHHTTT--TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHH----HHHHHHHHHHHh--ccHHHHHHHHHHHHHhCCCchHHHHH
Confidence 357999999999999999999999999999998874 899999999999 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELE 167 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~ 167 (429)
+|.+|..+|++++|+..|++++.++|++..++..++.++..++
T Consensus 90 la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 90 KAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQY 132 (133)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999998887553
No 25
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.62 E-value=3.3e-15 Score=150.74 Aligned_cols=134 Identities=25% Similarity=0.414 Sum_probs=119.3
Q ss_pred hHHHHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------------CccHHHHHHHHHHHHHHcCCCCHHHHH
Q 014213 38 TEVFIGMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRN------------HIDVSYLRSNMAACYMQMGLSEYPRAI 105 (429)
Q Consensus 38 ~~~~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~------------~~~~a~l~~nrA~~y~kl~~g~y~eAi 105 (429)
....+..+..++..|+.++..|+|++|+..|++||++.+.. .+....+|+|+|.||+++ ++|++|+
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~--g~~~~A~ 293 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKM--SDWQGAV 293 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHT--TCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhc--cCHHHHH
Confidence 34456889999999999999999999999999999944331 112346999999999999 9999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcccc
Q 014213 106 HECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRV 173 (429)
Q Consensus 106 ~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~ 173 (429)
..|++||+++|++.++|+++|.+|..+|++++|+.+|++|+.++|++..++..++.++..+++...+.
T Consensus 294 ~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~ 361 (370)
T 1ihg_A 294 DSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKE 361 (370)
T ss_dssp HHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999887665543
No 26
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.62 E-value=2.6e-14 Score=116.54 Aligned_cols=120 Identities=27% Similarity=0.380 Sum_probs=113.7
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKAL 122 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl 122 (429)
..+..+...|..++..|+|++|+..|.+++...|.+.. ++.++|.+|..+ |++++|+..+.+++.++|++..++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~----~~~~~a~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~ 83 (131)
T 2vyi_A 10 AEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAV----YFCNRAAAYSKL--GNYAGAVQDCERAICIDPAYSKAY 83 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHH----HHHHHHHHHHHh--hchHHHHHHHHHHHhcCccCHHHH
Confidence 45678999999999999999999999999999998864 899999999999 999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEK 168 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e 168 (429)
+.+|.+|..+|++++|+..|++++.++|++..++..++.++..+++
T Consensus 84 ~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 84 GRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999887754
No 27
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.61 E-value=3.2e-14 Score=121.93 Aligned_cols=126 Identities=25% Similarity=0.355 Sum_probs=114.1
Q ss_pred HhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHH
Q 014213 42 IGMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKA 121 (429)
Q Consensus 42 l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kA 121 (429)
+..+..+...|..++..|+|++|+..|.+++.+.|.+.. ++.++|.+|+.+ |+|++|+..+.+++.++|.+..+
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~----~~~~~a~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~ 83 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAI----YYGNRSLAYLRT--ECYGYALGDATRAIELDKKYIKG 83 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhCcccHHH
Confidence 478899999999999999999999999999999998874 899999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHHHhhcccc
Q 014213 122 LLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERV--KKELEKRGLRV 173 (429)
Q Consensus 122 l~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l--~~~l~e~~~a~ 173 (429)
++.+|.+|..+|++++|+..|++++.++|++..++..+..+ +...++...++
T Consensus 84 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~ 137 (166)
T 1a17_A 84 YYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAI 137 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988666666 44444444433
No 28
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.61 E-value=6.1e-15 Score=130.25 Aligned_cols=150 Identities=14% Similarity=0.094 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALL 123 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~ 123 (429)
.+..|.+.|+.++..|+|++|+..|++||+++|++.. ++.++|.+|+.+ |++++|+..+.+++..+|.+..+++
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~la~~~~~~--~~~~~a~~~~~~~~~~~~~~~~~~~ 77 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVE----TLLKLGKTYMDI--GLPNDAIESLKKFVVLDTTSAEAYY 77 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHC--CCHHHHHHHHHHHHhcCchhHHHHH
Confidence 3456899999999999999999999999999999885 899999999999 9999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccccccccCCCCCCCCCcccccchhhhhhhh
Q 014213 124 KRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVNDTVIELPPEYVEPPVTSIAPKVVKEKTK 202 (429)
Q Consensus 124 ~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~e~~~~L~p~~~~P~~~~~~a~v~k~~~~ 202 (429)
.+|.++...++++.|+..+.+++.++|++..++..++.++..+++...|+......+. ..|..+..+..++....+
T Consensus 78 ~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~---~~p~~~~~~~~lg~~~~~ 153 (184)
T 3vtx_A 78 ILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTIS---IKPGFIRAYQSIGLAYEG 153 (184)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---HCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHH---hcchhhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988888877777663333332 234444555555554443
No 29
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.61 E-value=1.6e-16 Score=139.05 Aligned_cols=126 Identities=16% Similarity=0.036 Sum_probs=111.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 014213 51 EGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYE 130 (429)
Q Consensus 51 ~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~ 130 (429)
+|..+..+|+++.|+..|.+++...|.++. .++++|.+|+++ |+|++|+..|+++|+++|+++.+|+.+|.+|.
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~----~~~~la~~y~~~--~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~ 76 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQKSI----KGFYFAKLYYEA--KEYDLAKKYICTYINVQERDPKAHRFLGLLYE 76 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHHHHT----THHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcccHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 578888999999999999999999887764 888999999999 99999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc---cccccCCC
Q 014213 131 ALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN---DTVIELPP 182 (429)
Q Consensus 131 ~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~---e~~~~L~p 182 (429)
.+|++++|+.+|++++.++|+++.++..++.++..+++...+.. +++..++|
T Consensus 77 ~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P 131 (150)
T 4ga2_A 77 LEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFP 131 (150)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHST
T ss_pred HcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999987654433 45666764
No 30
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.61 E-value=6.5e-15 Score=134.75 Aligned_cols=144 Identities=16% Similarity=0.166 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLP-RNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P-~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
..++..|..++..|+|++|+..|++++++.| .+. .+++++|.||+.+ |+|++|+..|++++.++|.+..+|+.
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~~~~--~~~~~A~~~~~~al~~~p~~~~~~~~ 81 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDS----VTAYNCGVCADNI--KKYKEAADYFDIAIKKNYNLANAYIG 81 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCH----HHHHHHHHHHHHT--TCHHHHHHHHHHHHHTTCSHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCc----HHHHHHHHHHHHh--hcHHHHHHHHHHHHHhCcchHHHHHH
Confidence 5689999999999999999999999999998 666 4788899999999 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHHHHHhhccccccccccCCCCCCCCC--cccccch
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPKNI-------MAAEIAERVKKELEKRGLRVNDTVIELPPEYVEPP--VTSIAPK 195 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~n~-------~a~~~La~l~~~l~e~~~a~~e~~~~L~p~~~~P~--~~~~~a~ 195 (429)
+|.+|..+|++++|+..|++++.++|++. .++..++.++..+++...+.......+. ..|. .+..+..
T Consensus 82 l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~---~~p~~~~~~~~~~ 158 (228)
T 4i17_A 82 KSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATD---VTSKKWKTDALYS 158 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT---SSCHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHh---cCCCcccHHHHHH
Confidence 99999999999999999999999999999 5577777777777777777664444443 3344 3344444
Q ss_pred hhh
Q 014213 196 VVK 198 (429)
Q Consensus 196 v~k 198 (429)
++.
T Consensus 159 l~~ 161 (228)
T 4i17_A 159 LGV 161 (228)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 31
>1wmh_B Partitioning defective-6 homolog alpha; kinase, PB1 domain, OPCA motif, APKC, cell polarity, transferase/cell cycle complex; 1.50A {Homo sapiens} SCOP: d.15.2.2
Probab=99.60 E-value=3.3e-15 Score=120.53 Aligned_cols=77 Identities=30% Similarity=0.402 Sum_probs=69.9
Q ss_pred CceeEEEEeCCceEEEEccCC--ccHHHHHHHHHhhCCCC-CceEEEEECCCCCEEEecChHHHHHHHHhhccCCcEEEE
Q 014213 260 PKKTVKLVFGEDIRVAQLPLN--SSLLQLREVISDRFPSC-RAVLIKYRDEEGDLVTITTDEELRWAEASAEMQGSVRLF 336 (429)
Q Consensus 260 ~~~~vK~~~~~DiR~~~i~~~--~~~~~L~~~v~~kf~~~-~~~~iky~DedgDliti~~~~dl~~a~~~~~~~~~~rl~ 336 (429)
..+.||..|+.|+|||.|+.+ .+|.+|...|+..|+.. .+|.|.|.|+|||||||++||+|.+|++++.+ .+||+
T Consensus 5 ~~l~vKskf~aE~RRFs~d~~~~~~fe~f~~lv~~lh~L~~~~f~i~Y~D~dGDLlpInnDdnl~~Al~~a~p--lLRl~ 82 (86)
T 1wmh_B 5 SIVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLGYTDAHGDLLPLTNDDSLHRALASGPP--PLRLL 82 (86)
T ss_dssp CEEEEEEEETTEEEEEEEEGGGCCCHHHHHHHHHHHTTCTTCCCEEEEECTTSCEEECCSHHHHHHHTTSSSS--CEEEE
T ss_pred CEEEEEeecCCeeeEeEccCCCCCCHHHHHHHHHHHcCCCCCCEEEEEECCCCCEeeecCHHHHHHHHHhCCC--cEEEE
Confidence 468899999999999999866 89999999999999732 26999999999999999999999999999854 89999
Q ss_pred EE
Q 014213 337 VV 338 (429)
Q Consensus 337 v~ 338 (429)
|+
T Consensus 83 Iq 84 (86)
T 1wmh_B 83 VQ 84 (86)
T ss_dssp EE
T ss_pred EE
Confidence 97
No 32
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.60 E-value=6.7e-15 Score=135.75 Aligned_cols=125 Identities=19% Similarity=0.154 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKR 125 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~r 125 (429)
..+...|..++..|+|++|+..|+++|.++|.+.. ++.++|.+|.++ |++++|+..++++++++|++..+++.+
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~----a~~~lg~~~~~~--g~~~~A~~~~~~al~~~P~~~~a~~~l 79 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKENPQDPE----ALYWLARTQLKL--GLVNPALENGKTLVARTPRYLGGYMVL 79 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 45888999999999999999999999999999885 899999999999 999999999999999999999999999
Q ss_pred HHHHHHc-----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccccc
Q 014213 126 ARCYEAL-----------NRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVNDT 176 (429)
Q Consensus 126 A~ay~~L-----------G~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~e~ 176 (429)
|.+|..+ |++++|+..|++++.++|++..++..++.++..+++...+....
T Consensus 80 g~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~ 141 (217)
T 2pl2_A 80 SEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASL 141 (217)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHH
Confidence 9999999 99999999999999999999999999999999988877776633
No 33
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.60 E-value=3.4e-15 Score=151.70 Aligned_cols=150 Identities=13% Similarity=0.020 Sum_probs=131.6
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCC-HHHHHHHHHHHHHhCCCCHHH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSE-YPRAIHECNLALEVTPLYSKA 121 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~-y~eAi~~~~~ALeldP~~~kA 121 (429)
..+..+...|..++..|+|++|+..|++||.++|.+.. +|+++|.+|..+ |+ |++|+..|++||+++|++..+
T Consensus 95 ~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~----a~~~~g~~l~~~--g~d~~eAl~~~~~al~l~P~~~~a 168 (382)
T 2h6f_A 95 KFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYT----VWHFRRVLLKSL--QKDLHEEMNYITAIIEEQPKNYQV 168 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHH----HHHHHHHHHHHc--ccCHHHHHHHHHHHHHHCCCCHHH
Confidence 45677999999999999999999999999999999885 999999999999 96 999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccccccccCCCCCCCCCcccccchhhhhhh
Q 014213 122 LLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVNDTVIELPPEYVEPPVTSIAPKVVKEKT 201 (429)
Q Consensus 122 l~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~e~~~~L~p~~~~P~~~~~~a~v~k~~~ 201 (429)
|+++|.+|..+|++++|+.+|++||.++|++..++..++.++..+++...++......|. ..|.....|..++....
T Consensus 169 ~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~---l~P~~~~a~~~lg~~l~ 245 (382)
T 2h6f_A 169 WHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLK---EDVRNNSVWNQRYFVIS 245 (382)
T ss_dssp HHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHH---HCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHH---hCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988877774433332 23455556655554443
No 34
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.58 E-value=2e-15 Score=149.81 Aligned_cols=128 Identities=24% Similarity=0.384 Sum_probs=98.6
Q ss_pred hHHHHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc-------------cHHHHHHHHHHHHHHcCCCCHHHH
Q 014213 38 TEVFIGMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI-------------DVSYLRSNMAACYMQMGLSEYPRA 104 (429)
Q Consensus 38 ~~~~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~-------------~~a~l~~nrA~~y~kl~~g~y~eA 104 (429)
....+..+..++.+|+.++..|+|++|+..|.+||.+.|.+.. ....+|+|+|.||+++ ++|++|
T Consensus 172 ~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~--g~~~~A 249 (338)
T 2if4_A 172 VEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKL--KRYDEA 249 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTT--TCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHc--CCHHHH
Confidence 3445688999999999999999999999999999999997541 0013899999999999 999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 014213 105 IHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELE 167 (429)
Q Consensus 105 i~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~ 167 (429)
+..|+++|+++|++.++|+++|.+|..+|+|++|+.+|++++.++|++..++..+..+.....
T Consensus 250 ~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~ 312 (338)
T 2if4_A 250 IGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEK 312 (338)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC--------------------
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998865553
No 35
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.58 E-value=1.1e-14 Score=123.14 Aligned_cols=102 Identities=16% Similarity=0.081 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 014213 47 ELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRA 126 (429)
Q Consensus 47 ~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA 126 (429)
.+...|..++..|++++|+..|+++++++|.+.. +|.++|.+|..+ |++++|+..|++|++++|++..+++.+|
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~----a~~~lg~~~~~~--g~~~~A~~~~~~al~l~P~~~~~~~~la 92 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREE----AWRSLGLTQAEN--EKDGLAIIALNHARMLDPKDIAVHAALA 92 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 4778999999999999999999999999999885 999999999999 9999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 014213 127 RCYEALNRLDLAFRDVTTVLNKEPKNIM 154 (429)
Q Consensus 127 ~ay~~LG~~deAl~~~~kAL~l~P~n~~ 154 (429)
.+|..+|++++|+..|++++.++|++..
T Consensus 93 ~~~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 93 VSHTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999999999998753
No 36
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.58 E-value=5.4e-14 Score=114.87 Aligned_cols=119 Identities=25% Similarity=0.319 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC-----
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY----- 118 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~----- 118 (429)
.+..+...|..++..|+|++|+..|.+++.+.|.+.. ++.++|.+|+.+ |+|++|+..+++++.+.|.+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~----~~~~la~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~~ 76 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMT----YITNQAAVYFEK--GDYNKCRELCEKAIEVGRENREDYR 76 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHH----HHHHHHHHHHHh--ccHHHHHHHHHHHHhhccccchhHH
Confidence 4678999999999999999999999999999998874 899999999999 99999999999999999887
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhh
Q 014213 119 --SKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKR 169 (429)
Q Consensus 119 --~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~ 169 (429)
..+++.+|.+|..+|++++|+..|++++.+.| +..+...+..+...+++.
T Consensus 77 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 77 QIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKEQ 128 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 688999999988877653
No 37
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.58 E-value=5.8e-14 Score=116.29 Aligned_cols=117 Identities=14% Similarity=0.058 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC---HHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY---SKAL 122 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~---~kAl 122 (429)
..+...|..++..|+|++|+..|.+++...|.+. ....++.++|.+|+.+ |+|++|+..|++++..+|++ ..++
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~-~~~~~~~~lg~~~~~~--~~~~~A~~~~~~~~~~~p~~~~~~~~~ 79 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGV-YTPNALYWLGESYYAT--RNFQLAEAQFRDLVSRYPTHDKAAGGL 79 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSST-THHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTSTTHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCc-ccHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHCCCCcccHHHH
Confidence 3577899999999999999999999999999876 2334889999999999 99999999999999999999 8999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKE 165 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~ 165 (429)
+.+|.+|..+|++++|+..|++++...|++..+......+...
T Consensus 80 ~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l 122 (129)
T 2xev_A 80 LKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSI 122 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888777776543
No 38
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.57 E-value=2.6e-14 Score=156.67 Aligned_cols=125 Identities=17% Similarity=0.128 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALL 123 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~ 123 (429)
.+..+.++|+.|++.|+|++|+..|++||+++|++.. +|+|+|.+|..+ |++++|+..|++||+++|++..+|+
T Consensus 42 ~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~----a~~nLg~~l~~~--g~~~~A~~~~~kAl~l~P~~~~a~~ 115 (723)
T 4gyw_A 42 FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFAD----AYSNMGNTLKEM--QDVQGALQCYTRAIQINPAFADAHS 115 (723)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 3566889999999999999999999999999999885 999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 124 KRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 124 ~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
++|.+|..+|++++|+.+|++|++++|++..++..++.++..+++...+..
T Consensus 116 ~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~ 166 (723)
T 4gyw_A 116 NLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDE 166 (723)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHH
Confidence 999999999999999999999999999999999999999998887655544
No 39
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.55 E-value=2.7e-13 Score=109.48 Aligned_cols=116 Identities=25% Similarity=0.323 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..++..|++++|+..|.+++...|.+.. ++.++|.+|..+ |++++|+..+++++.++|.+..+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~----~~~~la~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~~~ 82 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAE----AWYNLGNAYYKQ--GDYDEAIEYYQKALELDPNNAEAWYN 82 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHH----HHHHHHHHHHHh--CCHHHHHHHHHHHHHhCCccHHHHHH
Confidence 466889999999999999999999999999998764 889999999999 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKEL 166 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l 166 (429)
+|.+|..+|++++|+..|++++.++|++..++..++.++..+
T Consensus 83 la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 83 LGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 124 (125)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999998887654
No 40
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.55 E-value=5.3e-14 Score=129.71 Aligned_cols=123 Identities=17% Similarity=0.072 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 014213 45 SQELKEEGNKLFQK-----------RDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALE 113 (429)
Q Consensus 45 A~~lk~~Gn~lf~~-----------gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALe 113 (429)
+..+...|..++.. |++++|+..|++|++++|.+.. ++.++|.+|..+ |++++|+..|+++++
T Consensus 73 ~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~----~~~~lg~~~~~~--g~~~~A~~~~~~al~ 146 (217)
T 2pl2_A 73 LGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAP----LHLQRGLVYALL--GERDKAEASLKQALA 146 (217)
T ss_dssp HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHH----HHHHHHHHHHHc--CChHHHHHHHHHHHh
Confidence 34678899999999 9999999999999999999885 999999999999 999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 114 VTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 114 ldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
++ +++.+++.+|.+|..+|++++|+..|++++.++|+++.++..++.++..+++...+..
T Consensus 147 ~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~ 206 (217)
T 2pl2_A 147 LE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAAR 206 (217)
T ss_dssp HC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC---------
T ss_pred cc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccCHHHHHH
Confidence 99 9999999999999999999999999999999999999999999999988887776655
No 41
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.54 E-value=1.1e-14 Score=148.00 Aligned_cols=119 Identities=9% Similarity=-0.039 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 44 MSQELKEEGNKLFQKRD-HGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKAL 122 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gd-yeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl 122 (429)
.+..|..+|..++..|+ |++|+..|++||.++|++.. +|+++|.+|..+ |+|++|+..|++||+++|++..+|
T Consensus 130 ~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~----a~~~~g~~~~~~--g~~~eAl~~~~kal~ldP~~~~a~ 203 (382)
T 2h6f_A 130 NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQ----VWHHRRVLVEWL--RDPSQELEFIADILNQDAKNYHAW 203 (382)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHH--TCCTTHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHc--cCHHHHHHHHHHHHHhCccCHHHH
Confidence 35568899999999997 99999999999999999985 999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEK 168 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e 168 (429)
+++|.+|..+|++++|+.+|+++|.++|++..++..++.++..+..
T Consensus 204 ~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~ 249 (382)
T 2h6f_A 204 QHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTG 249 (382)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999988543
No 42
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.53 E-value=1.8e-13 Score=120.68 Aligned_cols=131 Identities=16% Similarity=0.145 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..++..|++++|+..|.+++...|.+.. ++.++|.++... ++++.|+..+.+++.++|.+..+++.
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~a~~~~~~a~~~~~~~~~~~~~ 112 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAE----AYYILGSANFMI--DEKQAAIDALQRAIALNTVYADAYYK 112 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhCccchHHHHH
Confidence 456889999999999999999999999999999875 889999999999 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc--cccccCC
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN--DTVIELP 181 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~--e~~~~L~ 181 (429)
+|.+|..+|++++|+..|++++.++|++..++..++.++..+++...|.. .++.+++
T Consensus 113 lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 171 (184)
T 3vtx_A 113 LGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKE 171 (184)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999998877777 4445554
No 43
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.51 E-value=1.2e-13 Score=132.99 Aligned_cols=102 Identities=28% Similarity=0.423 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..++..|+.++..|+|++|+..|++|+.++|.+.. +++++|.+|+.+ |+|++|+..|++|++++|++..++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~la~~~~~~--~~~~~A~~~~~~al~~~p~~~~~~~~ 77 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAV----YYTNRALCYLKM--QQPEQALADCRRALELDGQSVKAHFF 77 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHTTSCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHH----HHHHHHHHHHHh--cCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 567999999999999999999999999999998874 999999999999 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPKN 152 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~n 152 (429)
+|.+|..+|++++|+.+|++++.++|++
T Consensus 78 lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 78 LGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999976
No 44
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.50 E-value=4.2e-14 Score=147.12 Aligned_cols=126 Identities=25% Similarity=0.347 Sum_probs=114.9
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKAL 122 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl 122 (429)
+.+..+...|+.++..|+|++|+..|++|++++|.+.. +|.++|.+|+++ |+|++|+..|++|++++|++..+|
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~----~~~~lg~~~~~~--g~~~~A~~~~~~al~l~p~~~~~~ 77 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAI----YYGNRSLAYLRT--ECYGYALGDATRAIELDKKYIKGY 77 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHSCTTCHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHH----HHHHHHHHHHHh--cCHHHHHHHHHHHHHhCCCCHHHH
Confidence 45677888999999999999999999999999999874 999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH--HHHHHhhccccc
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERV--KKELEKRGLRVN 174 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l--~~~l~e~~~a~~ 174 (429)
+++|.+|..+|++++|+..|+++++++|++..++..++.+ +...++...|..
T Consensus 78 ~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~ 131 (477)
T 1wao_1 78 YRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIA 131 (477)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC--
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999988 555566666555
No 45
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.50 E-value=1.1e-13 Score=126.44 Aligned_cols=118 Identities=12% Similarity=-0.019 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCH------
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYS------ 119 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~------ 119 (429)
..+...|..++..|+|++|+..|++|++++|.+.. ++.++|.+|..+ |+|++|+..++++++++|++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~l~~~~~~~--~~~~~A~~~~~~al~~~p~~~~~~~~~ 116 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLAN----AYIGKSAAYRDM--KNNQEYIATLTEGIKAVPGNATIEKLY 116 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHH----HHHHHHHHHHHc--ccHHHHHHHHHHHHHHCCCcHHHHHHH
Confidence 34667999999999999999999999999998774 899999999999 999999999999999999999
Q ss_pred -HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHhh
Q 014213 120 -KALLKRARCYEALNRLDLAFRDVTTVLNKEPK--NIMAAEIAERVKKELEKR 169 (429)
Q Consensus 120 -kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~--n~~a~~~La~l~~~l~e~ 169 (429)
.+|+.+|.++..+|++++|+..|++++.++|+ +..++..++.++..++..
T Consensus 117 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 117 AIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999 999999999999877765
No 46
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.48 E-value=9.9e-14 Score=125.08 Aligned_cols=104 Identities=17% Similarity=0.172 Sum_probs=94.6
Q ss_pred HcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCH----------HHHHHHHHHHHHhCCCCHHHHHHHH
Q 014213 57 QKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEY----------PRAIHECNLALEVTPLYSKALLKRA 126 (429)
Q Consensus 57 ~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y----------~eAi~~~~~ALeldP~~~kAl~~rA 126 (429)
+.+.|++|+..|++|++++|.+.. +|+|+|.+++.+ +++ ++|+..|++||+++|++..+|+++|
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~ae----a~~n~G~~l~~l--~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG 87 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDAD----NLTRWGGVLLEL--SQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIG 87 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHH--HHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHh--cccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHH
Confidence 446789999999999999999986 999999999998 775 5999999999999999999999999
Q ss_pred HHHHHcC-----------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 014213 127 RCYEALN-----------RLDLAFRDVTTVLNKEPKNIMAAEIAERVKKEL 166 (429)
Q Consensus 127 ~ay~~LG-----------~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l 166 (429)
.+|..+| ++++|+.+|++|+.++|++..++..+..+.+..
T Consensus 88 ~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~ 138 (158)
T 1zu2_A 88 NAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAP 138 (158)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHH
T ss_pred HHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCH
Confidence 9999885 899999999999999999999888887765543
No 47
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.47 E-value=3.9e-13 Score=120.80 Aligned_cols=130 Identities=17% Similarity=0.141 Sum_probs=115.1
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKAL 122 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl 122 (429)
..+..+...|+.++..|+|++|+..|.+++ .| ++ .+++++|.+|+.+ |+|++|+..|++++.++|.+..+|
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~-~~----~~~~~lg~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~ 74 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DP-HS----RICFNIGCMYTIL--KNMTEAEKAFTRSINRDKHLAVAY 74 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC-CH----HHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC-Ch----HHHHHHHHHHHHc--CCHHHHHHHHHHHHHhCccchHHH
Confidence 456678999999999999999999999995 33 33 5899999999999 999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHHHhhccccc--cccccCC
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNI----------------MAAEIAERVKKELEKRGLRVN--DTVIELP 181 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~----------------~a~~~La~l~~~l~e~~~a~~--e~~~~L~ 181 (429)
+++|.+|..+|++++|+.+|++++.+.|.+. .++..++.++..+++...+.. .++..+.
T Consensus 75 ~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 151 (213)
T 1hh8_A 75 FQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMK 151 (213)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999988877 999999999999988777766 3444444
No 48
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.45 E-value=1.7e-12 Score=118.79 Aligned_cols=90 Identities=14% Similarity=0.016 Sum_probs=77.3
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 014213 51 EGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYE 130 (429)
Q Consensus 51 ~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~ 130 (429)
.|..++..|+|++|+..|+++|+++|.+.. ++.++|.+|+.+ |++++|+..|+++++++|+++.+|+.+|.+|+
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~lg~~~~~~--g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~ 133 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVD----CLEACAEMQVCR--GQEKDALRMYEKILQLEADNLAANIFLGNYYY 133 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHH--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999885 999999999999 99999999999999999999999999998886
Q ss_pred HcCC--HHHHHHHHHHHH
Q 014213 131 ALNR--LDLAFRDVTTVL 146 (429)
Q Consensus 131 ~LG~--~deAl~~~~kAL 146 (429)
..|+ ...+...|.+++
T Consensus 134 ~~~~~~~~~~~~~~~~~~ 151 (208)
T 3urz_A 134 LTAEQEKKKLETDYKKLS 151 (208)
T ss_dssp HHHHHHHHHHHHHHC---
T ss_pred HHhHHHHHHHHHHHHHHh
Confidence 6543 233444444443
No 49
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.45 E-value=1.5e-12 Score=114.53 Aligned_cols=115 Identities=21% Similarity=0.181 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHH-HHHcCCCCH--HHHHHHHHHHHHhCCCCHH
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAAC-YMQMGLSEY--PRAIHECNLALEVTPLYSK 120 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~-y~kl~~g~y--~eAi~~~~~ALeldP~~~k 120 (429)
.+..+...|..++..|+|++|+..|.+++.++|.+.. ++.++|.+ |+.. |++ ++|+..+++++.++|.+..
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~la~~l~~~~--~~~~~~~A~~~~~~al~~~p~~~~ 116 (177)
T 2e2e_A 43 NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAE----LYAALATVLYYQA--SQHMTAQTRAMIDKALALDSNEIT 116 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHH----HHHHHHHHHHHHT--TTCCCHHHHHHHHHHHHHCTTCHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH----HHHHHHHHHHHhc--CCcchHHHHHHHHHHHHhCCCcHH
Confidence 3467889999999999999999999999999998874 88999999 8888 998 9999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 014213 121 ALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKK 164 (429)
Q Consensus 121 Al~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~ 164 (429)
+++.+|.+|..+|++++|+..|++++.++|++......+..+..
T Consensus 117 ~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~~ 160 (177)
T 2e2e_A 117 ALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESINM 160 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHHH
Confidence 99999999999999999999999999999998766655555544
No 50
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.45 E-value=1.7e-12 Score=105.38 Aligned_cols=123 Identities=22% Similarity=0.256 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKR 125 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~r 125 (429)
..+...|..++..|++++|+..|.+++...|.+. .++.++|.++... |++++|+..+++++...|.+..+++.+
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~~a~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~~~l 75 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA----EAWYNLGNAYYKQ--GDYDEAIEYYQKALELDPRSAEAWYNL 75 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHH--TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcch----hHHHHHHHHHHHh--cCHHHHHHHHHHHHHHCCCchHHHHHH
Confidence 4577889999999999999999999999999876 4888999999999 999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 126 ARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 126 A~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
|.+|..+|++++|+..+++++.+.|.+..++..++.++..+++...+..
T Consensus 76 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 124 (136)
T 2fo7_A 76 GNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIE 124 (136)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHH
Confidence 9999999999999999999999999999999999998887776555544
No 51
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.44 E-value=5.7e-13 Score=106.02 Aligned_cols=101 Identities=14% Similarity=0.099 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCC--CHHHHHH
Q 014213 47 ELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPL--YSKALLK 124 (429)
Q Consensus 47 ~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~--~~kAl~~ 124 (429)
.+...|..++..|+|++|+..|++++++.|.+.. ++.++|.+|+.+ |+|++|+..++++++++|. +..+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~----~~~~~a~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESK----YWLMKGKALYNL--ERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHH----HHHHHHHHHHHc--cCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 4678899999999999999999999999998874 899999999999 9999999999999999999 9999999
Q ss_pred HHHHHHHc-CCHHHHHHHHHHHHHhCCCCH
Q 014213 125 RARCYEAL-NRLDLAFRDVTTVLNKEPKNI 153 (429)
Q Consensus 125 rA~ay~~L-G~~deAl~~~~kAL~l~P~n~ 153 (429)
+|.+|..+ |++++|+.++++++...|++.
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 82 KADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 99999999 999999999999999999763
No 52
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.44 E-value=8.9e-14 Score=118.43 Aligned_cols=104 Identities=17% Similarity=0.205 Sum_probs=93.3
Q ss_pred HHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 014213 72 LKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPK 151 (429)
Q Consensus 72 Lel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~ 151 (429)
..++|... ..+.++|.+|++. |+|++|+..|++||+++|.++.+|+++|.||..+|++++|+.+|++++.++|+
T Consensus 6 a~inP~~a----~~~~~~G~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 79 (126)
T 4gco_A 6 AYINPELA----QEEKNKGNEYFKK--GDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK 79 (126)
T ss_dssp -CCCHHHH----HHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHCHHHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh
Confidence 34566544 5899999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhhccccccc--cccCC
Q 014213 152 NIMAAEIAERVKKELEKRGLRVNDT--VIELP 181 (429)
Q Consensus 152 n~~a~~~La~l~~~l~e~~~a~~e~--~~~L~ 181 (429)
+..++..++.++..+++...+.... +..++
T Consensus 80 ~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~ 111 (126)
T 4gco_A 80 FIKGYIRKAACLVAMREWSKAQRAYEDALQVD 111 (126)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 9999999999999999888877744 44454
No 53
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.44 E-value=1.1e-13 Score=114.91 Aligned_cols=101 Identities=12% Similarity=0.052 Sum_probs=87.7
Q ss_pred HcCCHHHHHHHHHHHHHhC---CCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 014213 57 QKRDHGGALLKYEKALKLL---PRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALN 133 (429)
Q Consensus 57 ~~gdyeeAl~~Y~kALel~---P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG 133 (429)
..|+|++|+..|++||++. |.+. .++.++|.+|+.+ |+|++|+..++++++++|+++.+++.+|.+|..+|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~----~~~~~lg~~~~~~--~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 75 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLA----ECYLGLGSTFRTL--GEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLG 75 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHH----HHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHH----HHHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcC
Confidence 4689999999999999994 5444 5899999999999 99999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 014213 134 RLDLAFRDVTTVLNKEPKNIMAAEIAERVK 163 (429)
Q Consensus 134 ~~deAl~~~~kAL~l~P~n~~a~~~La~l~ 163 (429)
++++|+..|++++.+.|+++.+......+.
T Consensus 76 ~~~~A~~~~~~al~~~p~~~~~~~~~~ai~ 105 (117)
T 3k9i_A 76 RYEQGVELLLKIIAETSDDETIQSYKQAIL 105 (117)
T ss_dssp CHHHHHHHHHHHHHHHCCCHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 999999999999999999998766554443
No 54
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.44 E-value=3.9e-12 Score=121.01 Aligned_cols=122 Identities=21% Similarity=0.267 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKR 125 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~r 125 (429)
......|..++..|++++|+..|++++...|.+......++.++|.+|..+ |++++|+..|+++++++|+++.+++.+
T Consensus 235 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~~~~ 312 (359)
T 3ieg_A 235 NKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKD--EKPVEAIRICSEVLQMEPDNVNALKDR 312 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHc--cCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 345567999999999999999999999999997754455688899999999 999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhh
Q 014213 126 ARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKR 169 (429)
Q Consensus 126 A~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~ 169 (429)
|.+|..+|++++|+..|++++.++|++..++..+..++..+++.
T Consensus 313 ~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~ 356 (359)
T 3ieg_A 313 AEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQS 356 (359)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999888653
No 55
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.43 E-value=7.2e-13 Score=122.79 Aligned_cols=143 Identities=9% Similarity=0.048 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC--CCC-HHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVT--PLY-SKAL 122 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld--P~~-~kAl 122 (429)
..+...|..++..|+|++|+..|+++++.+|.+.. ++.++|.+|+.+ |+|++|+..++++++.. |.. ..+|
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~----~~~~l~~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~~~~~ 77 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPY----IYNRRAVCYYEL--AKYDLAQKDIETYFSKVNATKAKSADF 77 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCST----THHHHHHHHHHT--TCHHHHHHHHHHHHTTSCTTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHH----HHHHHHHHHHHH--hhHHHHHHHHHHHHhccCchhHHHHHH
Confidence 34778899999999999999999999999998886 888899999999 99999999999999832 222 5568
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccccccccCCCCCCCCCcccccchhh
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVNDTVIELPPEYVEPPVTSIAPKVV 197 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~e~~~~L~p~~~~P~~~~~~a~v~ 197 (429)
+.+|.+|..+|++++|+..|++++.++|++..++..++.++..+++...+.......+. ..|.....+..++
T Consensus 78 ~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~---~~~~~~~~~~~l~ 149 (272)
T 3u4t_A 78 EYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIR---PTTTDPKVFYELG 149 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCC---SSCCCHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhh---cCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999998887777774444443 3455555555444
No 56
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.43 E-value=4.3e-12 Score=109.17 Aligned_cols=123 Identities=14% Similarity=0.136 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKR 125 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~r 125 (429)
..+...|..++..|++++|+..|.+++...|.+.. ++.++|.+|..+ |++++|+..+++++.++|.+..+++.+
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~----~~~~~a~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~~~~ 116 (186)
T 3as5_A 43 DVALHLGIAYVKTGAVDRGTELLERSLADAPDNVK----VATVLGLTYVQV--QKYDLAVPLLIKVAEANPINFNVRFRL 116 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHH--TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHH----HHHHHHHHHHHh--cCHHHHHHHHHHHHhcCcHhHHHHHHH
Confidence 34666777777777777777777777777776653 667777777777 777777777777777777777777777
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 126 ARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 126 A~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
|.+|..+|++++|+..|++++.+.|.+..++..++.++..+++...+..
T Consensus 117 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 165 (186)
T 3as5_A 117 GVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALP 165 (186)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHH
Confidence 7777777777777777777777777777777777777776665554444
No 57
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.43 E-value=2e-13 Score=147.76 Aligned_cols=144 Identities=17% Similarity=0.005 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKR 125 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~r 125 (429)
..+...|..++..|+|++|+..|++|++++|.+.. +|+++|.+|+.+ |+|++|+..|++|++++|++..+|+++
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~----a~~~lg~~~~~~--g~~~~A~~~~~~al~l~P~~~~~~~~l 507 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWR----LVWYRAVAELLT--GDYDSATKHFTEVLDTFPGELAPKLAL 507 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHH----HHHHHHHHHHHH--TCHHHHHHHHHHHHHHSTTCSHHHHHH
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 46788999999999999999999999999999885 999999999999 999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccccccccCCCCCCCCCcccccchhhhh
Q 014213 126 ARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVNDTVIELPPEYVEPPVTSIAPKVVKE 199 (429)
Q Consensus 126 A~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~e~~~~L~p~~~~P~~~~~~a~v~k~ 199 (429)
|.+|..+|++++ +.+|++|++++|++..++..++.++..+++...|.......+. ..|.....+..++..
T Consensus 508 g~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~---l~P~~~~a~~~~~~~ 577 (681)
T 2pzi_A 508 AATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPP---TSRHFTTARLTSAVT 577 (681)
T ss_dssp HHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCT---TSTTHHHHHHHHHHH
T ss_pred HHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcc---cCcccHHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999988888775544443 335444444444433
No 58
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.43 E-value=3.9e-14 Score=125.62 Aligned_cols=110 Identities=7% Similarity=-0.082 Sum_probs=100.8
Q ss_pred HHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 014213 66 LKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTV 145 (429)
Q Consensus 66 ~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kA 145 (429)
..|.+++.++|.+.. +++++|.+++++ |+|++|+..|++++.++|.++.+|+.+|.+|..+|+|++|+.+|+++
T Consensus 23 ~~l~~al~l~p~~~~----~~~~lg~~~~~~--g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~a 96 (151)
T 3gyz_A 23 ATLKDINAIPDDMMD----DIYSYAYDFYNK--GRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVA 96 (151)
T ss_dssp CCTGGGCCSCHHHHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHhCCCHHHHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 557888888998775 899999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHHHhhccccc--cccccCC
Q 014213 146 LNKEPKNIMAAEIAERVKKELEKRGLRVN--DTVIELP 181 (429)
Q Consensus 146 L~l~P~n~~a~~~La~l~~~l~e~~~a~~--e~~~~L~ 181 (429)
+.++|+++.++..++.++..+++...|.. .++..+.
T Consensus 97 l~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 97 FALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHS 134 (151)
T ss_dssp HHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 99999999999999999999998888777 4444444
No 59
>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A
Probab=99.43 E-value=9.9e-13 Score=105.82 Aligned_cols=79 Identities=23% Similarity=0.326 Sum_probs=71.4
Q ss_pred CceeEEEEeCCceEEEEccC--CccHHHHHHHHHhhCCCCCceEEEEECCCCCEEEecChHHHHHHHHhhcc-CCcEEEE
Q 014213 260 PKKTVKLVFGEDIRVAQLPL--NSSLLQLREVISDRFPSCRAVLIKYRDEEGDLVTITTDEELRWAEASAEM-QGSVRLF 336 (429)
Q Consensus 260 ~~~~vK~~~~~DiR~~~i~~--~~~~~~L~~~v~~kf~~~~~~~iky~DedgDliti~~~~dl~~a~~~~~~-~~~~rl~ 336 (429)
..+++||+|.+|+++|.|.- +.++.+|...|...|. +..|+|||.|||||.|+|+|+.|+..|+.++.. .+.|++.
T Consensus 5 ~~v~lkV~f~ge~~rf~vs~~~~~tweel~~mvk~~f~-L~~~~ikY~DEenD~v~i~Sq~E~eEAlkva~k~~n~L~m~ 83 (87)
T 2bkf_A 5 PQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFD-LNTIQIKYLDEENEEVSINSQGEYEEALKMAVKQGNQLQMQ 83 (87)
T ss_dssp CCEEEEEEETTEEEEEEESCGGGCCHHHHHHHHHHHHT-CSSEEEEEECTTSCEEEECSHHHHHHHHHHHHHTTTEEEEE
T ss_pred ceEEEEEEEcCCeeEEEeccCCCCCHHHHHHHHHHHcC-CCceEEEEEcCCCCEEEEecHHHHHHHHHHhccCCCEEEEE
Confidence 57899999999999988855 8999999999999995 569999999999999999999999999999876 5568888
Q ss_pred EEe
Q 014213 337 VVG 339 (429)
Q Consensus 337 v~e 339 (429)
|.+
T Consensus 84 v~~ 86 (87)
T 2bkf_A 84 VHE 86 (87)
T ss_dssp EEE
T ss_pred Eec
Confidence 865
No 60
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.42 E-value=2.6e-12 Score=116.96 Aligned_cols=112 Identities=24% Similarity=0.385 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..++..|+|++|+..|++++.+.|.+.. ++.++|.+|..+ |+|++|+..++++++++|++..+|+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~----~~~~l~~~~~~~--~~~~~A~~~~~~al~~~~~~~~~~~~ 212 (258)
T 3uq3_A 139 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDAR----GYSNRAAALAKL--MSFPEAIADCNKAIEKDPNFVRAYIR 212 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHH----HHHHHHHHHHHh--CCHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 345667777788888888888888888888777663 777788888777 78888888888888888888888888
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHH
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKE------PKNIMAAEIAERV 162 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~------P~n~~a~~~La~l 162 (429)
+|.+|..+|++++|+..|++++.++ |++..++..+.++
T Consensus 213 l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 213 KATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 8888888888888888888888877 7777776666554
No 61
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.42 E-value=5.9e-13 Score=124.61 Aligned_cols=128 Identities=16% Similarity=0.168 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC---HHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY---SKA 121 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~---~kA 121 (429)
+..+...|..++..|+|++|+..|++++...|.++ ....+++++|.||+++ |+|++|+..|++++.+.|++ ..+
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~-~~~~a~~~lg~~~~~~--~~~~~A~~~~~~~l~~~p~~~~~~~a 91 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHE-WAADAQFYLARAYYQN--KEYLLAASEYERFIQIYQIDPRVPQA 91 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCST-THHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCc-chHHHHHHHHHHHHHh--CcHHHHHHHHHHHHHHCCCCchhHHH
Confidence 45789999999999999999999999999999873 2235899999999999 99999999999999998854 779
Q ss_pred HHHHHHHHHH--------cCCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHHHhhcccccc
Q 014213 122 LLKRARCYEA--------LNRLDLAFRDVTTVLNKEPKNIMAA-----------------EIAERVKKELEKRGLRVND 175 (429)
Q Consensus 122 l~~rA~ay~~--------LG~~deAl~~~~kAL~l~P~n~~a~-----------------~~La~l~~~l~e~~~a~~e 175 (429)
++.+|.+|.. +|++++|+..|++++.+.|++..+. ..++.++..+++...++..
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 170 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVT 170 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHH
Confidence 9999999999 9999999999999999999987666 5667888877777776663
No 62
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.42 E-value=5.7e-12 Score=114.73 Aligned_cols=128 Identities=16% Similarity=0.185 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----------------------CCccHHHHHHHHHHHHHHcCCCCHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPR----------------------NHIDVSYLRSNMAACYMQMGLSEYP 102 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~----------------------~~~~~a~l~~nrA~~y~kl~~g~y~ 102 (429)
+..+...|..++..|++++|+..|++++.+.|. ..+....++.++|.+|+.+ |+|+
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 156 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTK--SDWP 156 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHh--cCHH
Confidence 577889999999999999999999999997664 2223456899999999999 9999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 103 RAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 103 eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
+|+..+++++.++|.+..+++.+|.+|..+|++++|+..|++++.++|++..++..++.++..+++...+..
T Consensus 157 ~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 228 (258)
T 3uq3_A 157 NAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALE 228 (258)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999987766665
No 63
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.42 E-value=1e-12 Score=137.74 Aligned_cols=124 Identities=10% Similarity=0.005 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..++..|+|++|+..|++|++++|.+.. ++.++|.+|..+ |+|++|+..|+++++++|++..+|++
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~lg~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~~~ 96 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPE----AVARLGRVRWTQ--QRHAEAAVLLQQASDAAPEHPGIALW 96 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHC--CCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 467899999999999999999999999999998874 999999999999 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---Hhhccccc
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKEL---EKRGLRVN 174 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l---~e~~~a~~ 174 (429)
+|.+|..+|++++|+..|++++.++|++..++..++.++..+ ++...+..
T Consensus 97 la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~ 149 (568)
T 2vsy_A 97 LGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSA 149 (568)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHH
Confidence 999999999999999999999999999999999999999999 77666655
No 64
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.40 E-value=4e-12 Score=122.70 Aligned_cols=121 Identities=16% Similarity=0.084 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKR 125 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~r 125 (429)
..+...|..++..|+|++|+..|++++.+.|.+.. ++.++|.+|..+ |++++|+..|+++++++|.+..+++.+
T Consensus 218 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~----~~~~l~~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~l 291 (368)
T 1fch_A 218 DVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYL----LWNKLGATLANG--NQSEEAVAAYRRALELQPGYIRSRYNL 291 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 44555666666666666666666666666665543 566666666666 666666666666666666666666666
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC-----------HHHHHHHHHHHHHHHhhccc
Q 014213 126 ARCYEALNRLDLAFRDVTTVLNKEPKN-----------IMAAEIAERVKKELEKRGLR 172 (429)
Q Consensus 126 A~ay~~LG~~deAl~~~~kAL~l~P~n-----------~~a~~~La~l~~~l~e~~~a 172 (429)
|.+|..+|++++|+..|++++.+.|++ ..++..++.++..+++...+
T Consensus 292 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 349 (368)
T 1fch_A 292 GISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAY 349 (368)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhH
Confidence 666666666666666666666666655 56666666666666554443
No 65
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.40 E-value=4.2e-12 Score=115.10 Aligned_cols=124 Identities=15% Similarity=0.029 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..++..|++++|+..|.+++.+.|.+.. ++.++|.+|..+ |++++|+..++++++++|.+..+++.
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~----~~~~la~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~~~ 130 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELDSSAAT----AYYGAGNVYVVK--EMYKEAKDMFEKALRAGMENGDLFYM 130 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHTCCSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchH----HHHHHHHHHHHh--ccHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 456778899999999999999999999999988764 888899999998 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
+|.+|..+|++++|+..|++++.+.|++..++..++.++..+++...+..
T Consensus 131 ~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 180 (243)
T 2q7f_A 131 LGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALS 180 (243)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHH
Confidence 99999999999999999999999999999999999999888887666655
No 66
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.40 E-value=7.5e-12 Score=115.56 Aligned_cols=124 Identities=18% Similarity=0.121 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALL 123 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~ 123 (429)
.+..+...|..++..|+|++|+..|++++.+.|.+.. ++.++|.+|+.+ |+|++|+..+++++.++|.+..+++
T Consensus 42 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~----~~~~la~~~~~~--~~~~~A~~~~~~al~~~~~~~~~~~ 115 (275)
T 1xnf_A 42 RAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPE----VFNYLGIYLTQA--GNFDAAYEAFDSVLELDPTYNYAHL 115 (275)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCTHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHH----HHHHHHHHHHHc--cCHHHHHHHHHHHHhcCccccHHHH
Confidence 4567889999999999999999999999999998874 899999999999 9999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 124 KRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 124 ~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
.+|.+|..+|++++|+..|++++.++|++......+..+ ...++...+..
T Consensus 116 ~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~A~~ 165 (275)
T 1xnf_A 116 NRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA-EQKLDEKQAKE 165 (275)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHHCHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHhcCHHHHHH
Confidence 999999999999999999999999999998766655544 33454444444
No 67
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.40 E-value=1.5e-12 Score=112.03 Aligned_cols=125 Identities=13% Similarity=0.086 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALL 123 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~ 123 (429)
.+..+...|..++..|++++|+..|++++...|.+. .++.++|.+|+.+ |++++|+..+++++.++|.+..+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~~ 80 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDADAFDV----DVALHLGIAYVKT--GAVDRGTELLERSLADAPDNVKVAT 80 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTTSCCH----HHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccCh----HHHHHHHHHHHHc--CCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 356788999999999999999999999999999876 4889999999999 9999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 124 KRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 124 ~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
.+|.+|...|++++|+..|++++.+.|.+..++..++.++..+++...+..
T Consensus 81 ~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 131 (186)
T 3as5_A 81 VLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAID 131 (186)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHH
Confidence 999999999999999999999999999999999999999988887666655
No 68
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.39 E-value=2.7e-12 Score=116.38 Aligned_cols=124 Identities=19% Similarity=0.113 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..++..|++++|+..|++++++.|.+.. ++.++|.+|+.+ |++++|+..+++++.++|.+..+++.
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~----~~~~~a~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~~~ 164 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGD----LFYMLGTVLVKL--EQPKLALPYLQRAVELNENDTEARFQ 164 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHH----HHHHHHHHHHHT--SCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHh--ccHHHHHHHHHHHHHhCCccHHHHHH
Confidence 345678899999999999999999999999998874 899999999999 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
+|.+|..+|++++|+..|++++.+.|++..++..++.++..+++...+..
T Consensus 165 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 214 (243)
T 2q7f_A 165 FGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALE 214 (243)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHH
Confidence 99999999999999999999999999999999999999999988777666
No 69
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.39 E-value=1.4e-12 Score=119.82 Aligned_cols=125 Identities=16% Similarity=0.112 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALL 123 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~ 123 (429)
.+..+...|..++..|+|++|+..|++++.+.|.+.. ++.++|.+|..+ |++++|+..++++++++|.+..+++
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~----~~~~la~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~~~ 109 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSAD----AHAALAVVFQTE--MEPKLADEEYRKALASDSRNARVLN 109 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHHCcCcHHHHH
Confidence 3677899999999999999999999999999998764 889999999999 9999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 124 KRARCYEALNRLDLAFRDVTTVLN--KEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 124 ~rA~ay~~LG~~deAl~~~~kAL~--l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
.+|.+|..+|++++|+..|++++. ..|.+..++..++.++..+++...+..
T Consensus 110 ~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 162 (252)
T 2ho1_A 110 NYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKE 162 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHH
Confidence 999999999999999999999999 888889999999999888877666655
No 70
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.39 E-value=1.9e-12 Score=123.15 Aligned_cols=124 Identities=19% Similarity=0.184 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..++..|+|++|+..|++++..+|.+.. ++.++|.+|+.+ |+|++|+..+++++.++|++..+++.
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~----~~~~~a~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~~~ 76 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYI----AYYRRATVFLAM--GKSKAALPDLTKVIALKMDFTAARLQ 76 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHH--TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHH----HHHHHHHHHHHc--cCHHHHHHHHHHHHHhCCCcchHHHH
Confidence 467899999999999999999999999999998874 899999999999 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC---CCHHHHHHHH------------HHHHHHHhhccccc
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEP---KNIMAAEIAE------------RVKKELEKRGLRVN 174 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P---~n~~a~~~La------------~l~~~l~e~~~a~~ 174 (429)
+|.+|..+|++++|+..|++++.++| ++..++..+. .++...++...+..
T Consensus 77 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~ 141 (359)
T 3ieg_A 77 RGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAIT 141 (359)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 99999999999999999999999999 8888888774 45555555444444
No 71
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.39 E-value=7.1e-13 Score=137.14 Aligned_cols=147 Identities=14% Similarity=0.027 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 44 MSQELKEEGNKLFQKRDH-GGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKAL 122 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdy-eeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl 122 (429)
.+..+...|..++..|+| ++|+..|++|++++|.+.. +|.++|.+|+.+ |+|++|+..|++|++++|+ ..++
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~----a~~~lg~~~~~~--g~~~~A~~~~~~al~~~p~-~~~~ 173 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVE----AWNQLGEVYWKK--GDVTSAHTCFSGALTHCKN-KVSL 173 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHH--TCHHHHHHHHHHHHTTCCC-HHHH
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHhhCCC-HHHH
Confidence 356688999999999999 9999999999999999875 999999999999 9999999999999999999 7999
Q ss_pred HHHHHHHHHc---------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH--------Hhhccccccc--cccCCCC
Q 014213 123 LKRARCYEAL---------NRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKEL--------EKRGLRVNDT--VIELPPE 183 (429)
Q Consensus 123 ~~rA~ay~~L---------G~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l--------~e~~~a~~e~--~~~L~p~ 183 (429)
+.+|.+|..+ |++++|+..|++++.++|++..++..++.++..+ ++...|.... +..+.|
T Consensus 174 ~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p- 252 (474)
T 4abn_A 174 QNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDR- 252 (474)
T ss_dssp HHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCG-
T ss_pred HHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCC-
Confidence 9999999999 9999999999999999999999999999999988 7777766633 444432
Q ss_pred CCCCCcccccchhhhh
Q 014213 184 YVEPPVTSIAPKVVKE 199 (429)
Q Consensus 184 ~~~P~~~~~~a~v~k~ 199 (429)
..+..+..+..++..
T Consensus 253 -~~~~~~~~~~~lg~~ 267 (474)
T 4abn_A 253 -KASSNPDLHLNRATL 267 (474)
T ss_dssp -GGGGCHHHHHHHHHH
T ss_pred -CcccCHHHHHHHHHH
Confidence 111444445444443
No 72
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.38 E-value=4e-12 Score=124.87 Aligned_cols=124 Identities=18% Similarity=0.084 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..+...|++++|+..|++++.++|.+.. ++.++|.++..+ |++++|+..+.+++.++|++..+++.
T Consensus 169 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~lg~~~~~~--~~~~~A~~~~~~al~~~p~~~~~~~~ 242 (388)
T 1w3b_A 169 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLD----AYINLGNVLKEA--RIFDRAVAAYLRALSLSPNHAVVHGN 242 (388)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHTT--TCTTHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHhhCcCCHHHHHH
Confidence 445666666666666666666666666666665543 555555555555 55555555555555555555555555
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
+|.+|..+|++++|+..|++++.++|+++.++..++.++..+++...+..
T Consensus 243 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~ 292 (388)
T 1w3b_A 243 LACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAED 292 (388)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 55555555555555555555555555555555555555555544444333
No 73
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.38 E-value=8e-12 Score=116.87 Aligned_cols=119 Identities=18% Similarity=0.161 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHH--------cCCCCHHHHHHHHHHHHHhCC
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQ--------MGLSEYPRAIHECNLALEVTP 116 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~k--------l~~g~y~eAi~~~~~ALeldP 116 (429)
+..+...|..++..|+|++|+..|++++.+.|.++ ....+++++|.||+. + |++++|+..|++++...|
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~-~~~~a~~~lg~~~~~~~~~~~~~~--~~~~~A~~~~~~~l~~~p 128 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDP-RVPQAEYERAMCYYKLSPPYELDQ--TDTRKAIEAFQLFIDRYP 128 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT-THHHHHHHHHHHHHHHCCCTTSCC--HHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCc-hhHHHHHHHHHHHHHhcccccccc--hhHHHHHHHHHHHHHHCc
Confidence 56788999999999999999999999999999775 345688999999999 8 999999999999999999
Q ss_pred CCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHH
Q 014213 117 LYSKAL-----------------LKRARCYEALNRLDLAFRDVTTVLNKEPK---NIMAAEIAERVKKEL 166 (429)
Q Consensus 117 ~~~kAl-----------------~~rA~ay~~LG~~deAl~~~~kAL~l~P~---n~~a~~~La~l~~~l 166 (429)
++..++ +.+|.+|..+|++++|+..|++++...|+ ...++..++.++..+
T Consensus 129 ~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 129 NHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHh
Confidence 986655 89999999999999999999999999998 467899999999887
No 74
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.38 E-value=3e-12 Score=125.79 Aligned_cols=124 Identities=22% Similarity=0.227 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..+...|++++|+..|.+++.+.|.+.. ++.++|.+|..+ |++++|+..++++++++|+++.+|+.
T Consensus 203 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~l~~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~~~ 276 (388)
T 1w3b_A 203 LDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAV----VHGNLACVYYEQ--GLIDLAIDTYRRAIELQPHFPDAYCN 276 (388)
T ss_dssp HHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHTCSSCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHhhCCCCHHHHHH
Confidence 455667777777777777777777777777776653 667777777777 77777777777777777777777777
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
+|.+|..+|++++|+..|++++.+.|++..++..++.++...++...+..
T Consensus 277 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~ 326 (388)
T 1w3b_A 277 LANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVR 326 (388)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHH
Confidence 77777777777777777777777777777777777777766665555554
No 75
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.38 E-value=5.3e-12 Score=113.34 Aligned_cols=104 Identities=13% Similarity=0.027 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCH-----
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYS----- 119 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~----- 119 (429)
+..+...|..++..|+|++|+..|++|+.++|.+.. +++++|.+|+.+ |+|++|+..|++++++.|.+.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~----~~~~lg~~~~~~--~~~~~A~~~~~~al~~~~~~~~~~~~ 110 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAV----AYFQRGMLYYQT--EKYDLAIKDLKEALIQLRGNQLIDYK 110 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHTTTTCSEEECG
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchH----HHHHHHHHHHHc--ccHHHHHHHHHHHHHhCCCccHHHHH
Confidence 357899999999999999999999999999998874 899999999999 999999999999999888776
Q ss_pred -----------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 014213 120 -----------KALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIM 154 (429)
Q Consensus 120 -----------kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~ 154 (429)
.+++++|.+|..+|++++|+.+|++++.++|++..
T Consensus 111 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 111 ILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp GGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred HhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc
Confidence 99999999999999999999999999999997643
No 76
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.37 E-value=3.8e-12 Score=122.63 Aligned_cols=125 Identities=12% Similarity=0.033 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHH-------------
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNL------------- 110 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~------------- 110 (429)
.+..+...|..++..|++++|+..|++++.++|++.. ++.++|.+|+.+ |++++|+..+++
T Consensus 116 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~----a~~~la~~~~~~--g~~~~A~~~l~~~~~~~p~~~~~~~ 189 (287)
T 3qou_A 116 EEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGE----IGLLLAETLIAL--NRSEDAEAVLXTIPLQDQDTRYQGL 189 (287)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHH----HHHHHHHHHHHT--TCHHHHHHHHTTSCGGGCSHHHHHH
T ss_pred chhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchh----HHHHHHHHHHHC--CCHHHHHHHHHhCchhhcchHHHHH
Confidence 3466889999999999999999999999999999985 899999999999 999887655544
Q ss_pred ---------------------HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHH
Q 014213 111 ---------------------ALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKN--IMAAEIAERVKKELE 167 (429)
Q Consensus 111 ---------------------ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n--~~a~~~La~l~~~l~ 167 (429)
++.++|++..+++.+|.+|...|++++|+..|++++.++|++ ..++..+..++..++
T Consensus 190 ~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g 269 (287)
T 3qou_A 190 VAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALG 269 (287)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcC
Confidence 466677777777777777777777777777777777777776 677777777777776
Q ss_pred hhccccc
Q 014213 168 KRGLRVN 174 (429)
Q Consensus 168 e~~~a~~ 174 (429)
+...+..
T Consensus 270 ~~~~a~~ 276 (287)
T 3qou_A 270 TGDALAS 276 (287)
T ss_dssp TTCHHHH
T ss_pred CCCcHHH
Confidence 5544443
No 77
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.37 E-value=7.6e-13 Score=116.41 Aligned_cols=126 Identities=11% Similarity=0.136 Sum_probs=109.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-H
Q 014213 51 EGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARC-Y 129 (429)
Q Consensus 51 ~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~a-y 129 (429)
.++.++..|+|++|+..|.+++..+|.+.. ++.++|.+|+.+ |+|++|+..|++++.++|.+..+++.+|.+ |
T Consensus 16 ~~~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~lg~~~~~~--~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~ 89 (177)
T 2e2e_A 16 PLHQFASQQNPEAQLQALQDKIRANPQNSE----QWALLGEYYLWQ--NDYSNSLLAYRQALQLRGENAELYAALATVLY 89 (177)
T ss_dssp TTCCCC-----CCCCHHHHHHHHHCCSCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred hhhhhhhccCHHHHHHHHHHHHHhCCCcHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 445567889999999999999999998874 899999999999 999999999999999999999999999999 8
Q ss_pred HHcCCH--HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc--cccccCCC
Q 014213 130 EALNRL--DLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN--DTVIELPP 182 (429)
Q Consensus 130 ~~LG~~--deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~--e~~~~L~p 182 (429)
...|++ ++|+..|++++.++|++..++..++.++..+++...+.. ..+..+.|
T Consensus 90 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 146 (177)
T 2e2e_A 90 YQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNS 146 (177)
T ss_dssp HHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCC
T ss_pred HhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCC
Confidence 899999 999999999999999999999999999999988777766 44455543
No 78
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.37 E-value=5.6e-12 Score=112.40 Aligned_cols=125 Identities=18% Similarity=0.093 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALL 123 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~ 123 (429)
.+..+...|..++..|++++|+..|.+++++.|.+.. ++..+|.+|..+ |++++|+..+++++.++|.+..+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~----~~~~l~~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~~~ 80 (225)
T 2vq2_A 7 VSNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNEL----AWLVRAEIYQYL--KVNDKAQESFRQALSIKPDSAEINN 80 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchH----HHHHHHHHHHHc--CChHHHHHHHHHHHHhCCCChHHHH
Confidence 3467889999999999999999999999999998874 889999999999 9999999999999999999999999
Q ss_pred HHHHHHHHc-CCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 124 KRARCYEAL-NRLDLAFRDVTTVLN--KEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 124 ~rA~ay~~L-G~~deAl~~~~kAL~--l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
.+|.+|..+ |++++|+..|++++. ..|.+..++..++.++..+++...+..
T Consensus 81 ~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 134 (225)
T 2vq2_A 81 NYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEA 134 (225)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHH
Confidence 999999999 999999999999999 677778999999999988887766655
No 79
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.36 E-value=3.6e-12 Score=123.94 Aligned_cols=101 Identities=22% Similarity=0.171 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKR 125 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~r 125 (429)
..+...|..++..|+|++|+..|++++.++|.+.. ++.++|.+|..+ |+|++|+..|+++++++|++..+|+.+
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~lg~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~~~l 139 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAE----AWQFLGITQAEN--ENEQAAIVALQRCLELQPNNLKALMAL 139 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHH----HHHHHHHHHHHC--CCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 45788899999999999999999999999998874 889999999999 999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 014213 126 ARCYEALNRLDLAFRDVTTVLNKEPKN 152 (429)
Q Consensus 126 A~ay~~LG~~deAl~~~~kAL~l~P~n 152 (429)
|.+|..+|++++|+..|++++.+.|++
T Consensus 140 ~~~~~~~g~~~~A~~~~~~al~~~p~~ 166 (365)
T 4eqf_A 140 AVSYTNTSHQQDACEALKNWIKQNPKY 166 (365)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHccccHHHHHHHHHHHHHhCccc
Confidence 999999999999999888888877653
No 80
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.36 E-value=4.1e-13 Score=107.93 Aligned_cols=92 Identities=26% Similarity=0.368 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC------
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY------ 118 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~------ 118 (429)
+..+...|..++..|+|++|+..|++|++++|.+.. ++.++|.||+.+ |+|++|+..|+++++++|++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~lg~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~~~ 77 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPV----GYSNKAMALIKL--GEYTQAIQMCQQGLRYTSTAEHVAIR 77 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHTSCSSTTSHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHH----HHHHHHHHHHHh--cCHHHHHHHHHHHHHhCCCccHHHHH
Confidence 345556666666666666666666666666665543 556666666666 66666666666666666665
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHH
Q 014213 119 SKALLKRARCYEALNRLDLAFRDV 142 (429)
Q Consensus 119 ~kAl~~rA~ay~~LG~~deAl~~~ 142 (429)
..+++++|.++..+|+++.|+..+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~a~~~~ 101 (111)
T 2l6j_A 78 SKLQYRLELAQGAVGSVQIPVVEV 101 (111)
T ss_dssp HHHHHHHHHHHHHHHCCCCCSSSS
T ss_pred HHHHHHHHHHHHHHHhHhhhHhHH
Confidence 556666666666666555554443
No 81
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.36 E-value=6.3e-12 Score=118.66 Aligned_cols=123 Identities=15% Similarity=0.062 Sum_probs=86.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC---------CCC
Q 014213 48 LKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVT---------PLY 118 (429)
Q Consensus 48 lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld---------P~~ 118 (429)
+...|..++..|++++|+..|++++.+.|.+. .++.++|.+|..+ |+|++|+..+++++.+. |.+
T Consensus 162 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~----~~~~~l~~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 235 (330)
T 3hym_B 162 MLYIGLEYGLTNNSKLAERFFSQALSIAPEDP----FVMHEVGVVAFQN--GEWKTAEKWFLDALEKIKAIGNEVTVDKW 235 (330)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCH----HHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHTTTSCSCTTTTC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhCCCCh----HHHHHHHHHHHHc--ccHHHHHHHHHHHHHHhhhccccccccHH
Confidence 44566666666666666666666666666655 3667777777777 77777777777777765 556
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccccc
Q 014213 119 SKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVNDT 176 (429)
Q Consensus 119 ~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~e~ 176 (429)
..+++.+|.+|..+|++++|+..|++++.++|++..++..++.++..+++...+....
T Consensus 236 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 293 (330)
T 3hym_B 236 EPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYF 293 (330)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHH
Confidence 6677777777777777777777777777777777777777777777777666655533
No 82
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.36 E-value=4.4e-12 Score=123.29 Aligned_cols=124 Identities=17% Similarity=0.075 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPR--NHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKAL 122 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~--~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl 122 (429)
+..+...|..+...|++++|+..|++++.+.|. +. .++.++|.+|..+ |+|++|+..++++++++|++..+|
T Consensus 177 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~----~~~~~l~~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~ 250 (365)
T 4eqf_A 177 PGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDP----DLQTGLGVLFHLS--GEFNRAIDAFNAALTVRPEDYSLW 250 (365)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHSCSSCCH----HHHHHHHHHHHHH--TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCH----HHHHHHHHHHHHC--CCHHHHHHHHHHHHHhCCCCHHHH
Confidence 444556667777777777777777777777776 33 3666777777777 777777777777777777777777
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
+.+|.+|..+|++++|+..|++++.++|++..++..++.++..+++...+..
T Consensus 251 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~ 302 (365)
T 4eqf_A 251 NRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVS 302 (365)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHH
Confidence 7777777777777777777777777777777777777777776665555444
No 83
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.36 E-value=1.6e-11 Score=122.05 Aligned_cols=124 Identities=22% Similarity=0.260 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKR 125 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~r 125 (429)
..+...|..++..|++++|+..|++++.+.|.++.....++.++|.+|.++ |++++|+..|++++.++|++..+|+.+
T Consensus 258 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~A~~~~~~a~~~~p~~~~~~~~l 335 (450)
T 2y4t_A 258 NKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKD--EKPVEAIRVCSEVLQMEPDNVNALKDR 335 (450)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 344666999999999999999999999999987654456889999999999 999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcc
Q 014213 126 ARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGL 171 (429)
Q Consensus 126 A~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~ 171 (429)
|.+|..+|++++|+.+|++++.++|++..++..++.+...++....
T Consensus 336 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 381 (450)
T 2y4t_A 336 AEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQSQK 381 (450)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhcccc
Confidence 9999999999999999999999999999999999999888876443
No 84
>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=99.36 E-value=2.2e-12 Score=106.13 Aligned_cols=80 Identities=24% Similarity=0.341 Sum_probs=72.7
Q ss_pred CCceeEEEEeCCceEEEEcc--CCccHHHHHHHHHhhCCCCCceEEEEECCCCCEEEecChHHHHHHHHhhcc-CCcEEE
Q 014213 259 EPKKTVKLVFGEDIRVAQLP--LNSSLLQLREVISDRFPSCRAVLIKYRDEEGDLVTITTDEELRWAEASAEM-QGSVRL 335 (429)
Q Consensus 259 ~~~~~vK~~~~~DiR~~~i~--~~~~~~~L~~~v~~kf~~~~~~~iky~DedgDliti~~~~dl~~a~~~~~~-~~~~rl 335 (429)
...+++||+|.+|+++|.|. .+.++.+|...|...|. +..|+|||.|||||.|+|+|++|+.+|+.++.. .+.|++
T Consensus 12 ~~~v~lkV~f~ge~~rF~Vs~~~~~tweel~~mvk~~f~-L~~~~IkY~DEenD~V~i~Sq~E~eEAlkva~k~~n~L~m 90 (101)
T 1wj6_A 12 EPQVTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFD-LNTIQIKYLDEENEEVSINSQGEYEEALKMAVKQGNQLQM 90 (101)
T ss_dssp CSCEEEEEEETTEEEEEEESCTTTSCHHHHHHHHHHHHC-CSSBCCEEECTTSCEECCCSHHHHHHHHHHHHHHTSEEEE
T ss_pred CccEEEEEEEcCCeeEEEecCCCCCCHHHHHHHHHHHcC-CCceEEEEecCCCCEEEEecHHHHHHHHHHhccCCCEEEE
Confidence 57899999999999998884 48999999999999995 669999999999999999999999999999876 566888
Q ss_pred EEEe
Q 014213 336 FVVG 339 (429)
Q Consensus 336 ~v~e 339 (429)
.|.+
T Consensus 91 ~V~~ 94 (101)
T 1wj6_A 91 QVHE 94 (101)
T ss_dssp ECCB
T ss_pred EEee
Confidence 8876
No 85
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.36 E-value=5.2e-12 Score=125.59 Aligned_cols=114 Identities=21% Similarity=0.226 Sum_probs=105.7
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKAL 122 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl 122 (429)
..+..+...|..++..|+|++|+..|++++...|.+.. +++++|.+|+.+ |++++|+..++++++++|++..++
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~----~~~~l~~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~ 97 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPDNYI----AYYRRATVFLAM--GKSKAALPDLTKVIQLKMDFTAAR 97 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCccHH----HHHHHHHHHHHC--CCHHHHHHHHHHHHhcCCCcHHHH
Confidence 34677999999999999999999999999999998874 999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHH
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNI---MAAEIAERV 162 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~---~a~~~La~l 162 (429)
+.+|.+|..+|++++|+..|++++.++|++. .++..+..+
T Consensus 98 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~ 140 (450)
T 2y4t_A 98 LQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKS 140 (450)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHH
Confidence 9999999999999999999999999999998 777666443
No 86
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.35 E-value=3.8e-12 Score=117.45 Aligned_cols=110 Identities=14% Similarity=0.202 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHH---H
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSK---A 121 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~k---A 121 (429)
+..+...|..++..|+|++|+..|++++...|.++. ...+++++|.+|+++ |+|++|+..|+++++..|++.. +
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~-~~~a~~~lg~~~~~~--~~~~~A~~~~~~~l~~~P~~~~~~~a 80 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPY-SQQVQLDLIYAYYKN--ADLPLAQAAIDRFIRLNPTHPNIDYV 80 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTT-HHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHCcCCCcHHHH
Confidence 456889999999999999999999999999997652 235789999999999 9999999999999999999865 8
Q ss_pred HHHHHHHHHH------------------cCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 122 LLKRARCYEA------------------LNRLDLAFRDVTTVLNKEPKNIMAAE 157 (429)
Q Consensus 122 l~~rA~ay~~------------------LG~~deAl~~~~kAL~l~P~n~~a~~ 157 (429)
++.+|.+|.. +|++++|+..|++++...|++..+..
T Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~ 134 (225)
T 2yhc_A 81 MYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTD 134 (225)
T ss_dssp HHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHH
T ss_pred HHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHH
Confidence 9999999987 57899999999999999999976653
No 87
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.35 E-value=4.2e-13 Score=117.17 Aligned_cols=110 Identities=13% Similarity=-0.036 Sum_probs=100.3
Q ss_pred HHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 014213 66 LKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTV 145 (429)
Q Consensus 66 ~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kA 145 (429)
..|.+++.++|.+.. +++++|.+++.. |+|++|+..|++++.++|.++.+|+.+|.+|..+|++++|+.+|+++
T Consensus 8 ~~~~~al~~~p~~~~----~~~~~g~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 81 (148)
T 2vgx_A 8 GTIAMLNEISSDTLE----QLYSLAFNQYQS--GXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYG 81 (148)
T ss_dssp CSHHHHTTCCHHHHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHcCCHhhHH----HHHHHHHHHHHc--CChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 568899999997764 889999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHHHhhccccc--cccccCC
Q 014213 146 LNKEPKNIMAAEIAERVKKELEKRGLRVN--DTVIELP 181 (429)
Q Consensus 146 L~l~P~n~~a~~~La~l~~~l~e~~~a~~--e~~~~L~ 181 (429)
+.++|+++.++..++.++..+++...+.. .++..+.
T Consensus 82 l~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 119 (148)
T 2vgx_A 82 AVMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELI 119 (148)
T ss_dssp HHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 99999999999999999999998877776 3344454
No 88
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.35 E-value=1e-11 Score=113.98 Aligned_cols=124 Identities=13% Similarity=-0.013 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--hCCCCHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALE--VTPLYSKAL 122 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALe--ldP~~~kAl 122 (429)
+..+...|..++..|++++|+..|.+++.+.|.+.. ++.++|.+|..+ |++++|+..+++++. ..|.+..++
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~----~~~~la~~~~~~--g~~~~A~~~~~~~~~~~~~~~~~~~~ 144 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALASDSRNAR----VLNNYGGFLYEQ--KRYEEAYQRLLEASQDTLYPERSRVF 144 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHTTCTTCTTHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHH----HHHHHHHHHHHH--hHHHHHHHHHHHHHhCccCcccHHHH
Confidence 345678899999999999999999999999998764 899999999999 999999999999999 889999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
+.+|.+|..+|++++|+..|++++.+.|.+..++..++.++..+++...+..
T Consensus 145 ~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 196 (252)
T 2ho1_A 145 ENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQ 196 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHH
Confidence 9999999999999999999999999999999999999999999887776665
No 89
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.34 E-value=1.5e-11 Score=113.93 Aligned_cols=114 Identities=15% Similarity=0.169 Sum_probs=53.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 014213 48 LKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRAR 127 (429)
Q Consensus 48 lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ 127 (429)
+...|..++..|++++|+..|+++++++|.+.. ++.++|.+|+.+ |+|++|+..++++++++|.+..+++.+|.
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~----~~~~l~~~~~~~--~~~~~A~~~~~~al~~~~~~~~~~~~l~~ 150 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLD----MYGQIGSYFYNK--GNFPLAIQYMEKQIRPTTTDPKVFYELGQ 150 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH----HHHHHHHHHHHT--TCHHHHHHHHGGGCCSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCcccHH----HHHHHHHHHHHc--cCHHHHHHHHHHHhhcCCCcHHHHHHHHH
Confidence 344444444444444444444444444444442 444444444444 44444444444444444444444444442
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 014213 128 CYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELE 167 (429)
Q Consensus 128 ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~ 167 (429)
.++..+++++|+..|++++.++|++..++..++.++..++
T Consensus 151 ~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~ 190 (272)
T 3u4t_A 151 AYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQD 190 (272)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcC
Confidence 2222334444444444454444444444444444444443
No 90
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.33 E-value=5.6e-12 Score=130.38 Aligned_cols=125 Identities=12% Similarity=0.030 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHc---------CCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHc------CCCCHHHHHHHHHH
Q 014213 46 QELKEEGNKLFQK---------RDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQM------GLSEYPRAIHECNL 110 (429)
Q Consensus 46 ~~lk~~Gn~lf~~---------gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl------~~g~y~eAi~~~~~ 110 (429)
..+...|..++.. |+|++|+..|++|++++|.+.. +|+++|.+|+.+ ..|+|++|+..|++
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~ 246 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGR----SWYILGNAYLSLYFNTGQNPKISQQALSAYAQ 246 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHHHHhhccccchHHHHHHHHHH
Confidence 4678889999999 9999999999999999999885 899999999875 12689999999999
Q ss_pred HHHhCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 111 ALEVTP---LYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 111 ALeldP---~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
|++++| .++.+|+++|.+|..+|++++|+.+|++++.++|++..++..++.++..+++...++.
T Consensus 247 al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eAi~ 313 (474)
T 4abn_A 247 AEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLLE 313 (474)
T ss_dssp HHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999999999999987766654
No 91
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.33 E-value=1.8e-11 Score=115.33 Aligned_cols=124 Identities=16% Similarity=0.192 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..++..|++++|+..|.+++.+.|.+.. ++.++|.+|..+ |++++|+..++++++++|++..+++.
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~----~~~~l~~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~~~~ 245 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQ----LWNKLGATLANG--NRPQEALDAYNRALDINPGYVRVMYN 245 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 455778899999999999999999999999998774 889999999999 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC------------CHHHHHHHHHHHHHHHhhccccc
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPK------------NIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~------------n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
+|.+|..+|++++|+..|++++.+.|+ +..++..++.++..+++...+..
T Consensus 246 l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 307 (327)
T 3cv0_A 246 MAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVEL 307 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHH
Confidence 999999999999999999999999999 78899999999988877665544
No 92
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.33 E-value=5.6e-12 Score=111.75 Aligned_cols=121 Identities=12% Similarity=0.057 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 014213 47 ELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRA 126 (429)
Q Consensus 47 ~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA 126 (429)
.+...|..++..|++++|+..|++++.++|.+.. ++.++|.+|+.+ |++++|+..+++++.++| ++..+..++
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~----a~~~la~~~~~~--g~~~~A~~~~~~a~~~~p-~~~~~~~~~ 80 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDELQSRGD----VKLAKADCLLET--KQFELAQELLATIPLEYQ-DNSYKSLIA 80 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHH----HHHHHHHHHHHT--TCHHHHHHHHTTCCGGGC-CHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHH----HHHHHHHHHHHC--CCHHHHHHHHHHhhhccC-ChHHHHHHH
Confidence 3566777778888888888888888888887764 777788888877 777777777776666666 555444444
Q ss_pred HHH-HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 127 RCY-EALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 127 ~ay-~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
.+. ...+....|+..|++++.++|++..++..++.++..+++...+..
T Consensus 81 ~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~ 129 (176)
T 2r5s_A 81 KLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALE 129 (176)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHH
Confidence 332 122223345666666666666666666666666666655555544
No 93
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.32 E-value=1.9e-11 Score=100.30 Aligned_cols=101 Identities=16% Similarity=0.148 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 014213 62 GGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRD 141 (429)
Q Consensus 62 eeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~ 141 (429)
+.|+..|.++++.+|.+.. +++++|.+|+.+ |+|++|+..|++++.++|.+..+|+.+|.+|..+|++++|+..
T Consensus 2 ~~a~~~~~~al~~~p~~~~----~~~~lg~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~ 75 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNML----LRFTLGKTYAEH--EQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQA 75 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHH----HHHHHHHHHHHc--cCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3688999999999998874 999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCC--CHHHHHHHHHHHHHHHh
Q 014213 142 VTTVLNKEPK--NIMAAEIAERVKKELEK 168 (429)
Q Consensus 142 ~~kAL~l~P~--n~~a~~~La~l~~~l~e 168 (429)
|++++.+.|. +..+...+..+...++.
T Consensus 76 ~~~al~~~~~~~~~~~~~~l~~~l~~l~~ 104 (115)
T 2kat_A 76 WESGLAAAQSRGDQQVVKELQVFLRRLAR 104 (115)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccccccHHHHHHHHHHHHHhcc
Confidence 9999999884 55666666666666643
No 94
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.30 E-value=1.4e-11 Score=118.50 Aligned_cols=127 Identities=12% Similarity=0.016 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc--cHHHHHHHHHHHHHH-cCCCCHHHHHHHHHHHHHhCCCC----
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI--DVSYLRSNMAACYMQ-MGLSEYPRAIHECNLALEVTPLY---- 118 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~--~~a~l~~nrA~~y~k-l~~g~y~eAi~~~~~ALeldP~~---- 118 (429)
..+.+.|+.|...|+|++|+.+|++|+.+.|.... ..+.++.++|.+|.. + |+|++|+..|++|+++.|..
T Consensus 78 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~l--g~~~~A~~~~~~Al~~~~~~~~~~ 155 (292)
T 1qqe_A 78 NTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDL--HDYAKAIDCYELAGEWYAQDQSVA 155 (292)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHHHHhCCChH
Confidence 34445555555555555555555555555443221 123345555555555 4 55555555555555554432
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-------HHHHHHHHHHHHHhhccccc
Q 014213 119 --SKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIM-------AAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 119 --~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~-------a~~~La~l~~~l~e~~~a~~ 174 (429)
..+|.++|.+|..+|+|++|+.+|++++.+.|++.. ++..++.++..+++...+..
T Consensus 156 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 220 (292)
T 1qqe_A 156 LSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAAR 220 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 334555555555555555555555555555554332 23444444444444433333
No 95
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.30 E-value=2.8e-11 Score=114.24 Aligned_cols=122 Identities=15% Similarity=-0.010 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 47 ELKEEGNKLFQKR-DHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKR 125 (429)
Q Consensus 47 ~lk~~Gn~lf~~g-dyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~r 125 (429)
.+...|..++..| ++++|+..|++++.++|.+.. ++.++|.+|..+ |++++|+..+++++++.|.+..+++.+
T Consensus 92 ~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~----~~~~l~~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~~~~l 165 (330)
T 3hym_B 92 SWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGP----AWIAYGHSFAVE--SEHDQAMAAYFTAAQLMKGCHLPMLYI 165 (330)
T ss_dssp HHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTH----HHHHHHHHHHHH--TCHHHHHHHHHHHHHHTTTCSHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHH----HHHHHHHHHHHc--cCHHHHHHHHHHHHHhccccHHHHHHH
Confidence 3555666666666 666666666666666666553 566666666666 666666666666666666666666666
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 126 ARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 126 A~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
|.+|..+|++++|+..|++++.++|++..++..++.++..+++...+..
T Consensus 166 ~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 214 (330)
T 3hym_B 166 GLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEK 214 (330)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHH
Confidence 6666666666666666666666666666666666666666554444433
No 96
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.30 E-value=3.7e-11 Score=120.80 Aligned_cols=105 Identities=30% Similarity=0.460 Sum_probs=99.4
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKAL 122 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl 122 (429)
+.+..++..|+.+++.|+|++|+..|++++..+| +. .++.++|.||+.+ |+|++|+..|+++++++|++..+|
T Consensus 4 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p-~~----~~~~~la~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~ 76 (514)
T 2gw1_A 4 KYALALKDKGNQFFRNKKYDDAIKYYNWALELKE-DP----VFYSNLSACYVSV--GDLKKVVEMSTKALELKPDYSKVL 76 (514)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCC-CH----HHHHHHHHHHHHH--TCHHHHHHHHHHHHHHCSCCHHHH
T ss_pred hhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCc-cH----HHHHhHHHHHHHH--hhHHHHHHHHHHHhccChHHHHHH
Confidence 5788999999999999999999999999999998 34 4899999999999 999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNIM 154 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~ 154 (429)
+.+|.+|..+|++++|+..|++++.+.|.+..
T Consensus 77 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 108 (514)
T 2gw1_A 77 LRRASANEGLGKFADAMFDLSVLSLNGDFNDA 108 (514)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGG
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhcCCCccc
Confidence 99999999999999999999999999996644
No 97
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.29 E-value=8.5e-12 Score=135.04 Aligned_cols=137 Identities=12% Similarity=-0.019 Sum_probs=118.2
Q ss_pred HHcCCHHHHHHHHHHHH--------HhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 014213 56 FQKRDHGGALLKYEKAL--------KLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRAR 127 (429)
Q Consensus 56 f~~gdyeeAl~~Y~kAL--------el~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ 127 (429)
+..|++++|+..|++++ ..+|.+.. ++.++|.+|+.+ |+|++|+..|+++++++|++..+|+.+|.
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~----~~~~~a~~~~~~--g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 475 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVE----LPLMEVRALLDL--GDVAKATRKLDDLAERVGWRWRLVWYRAV 475 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSH----HHHHHHHHHHHH--TCHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchh----HHHHHHHHHHhc--CCHHHHHHHHHHHhccCcchHHHHHHHHH
Confidence 78999999999999999 89999885 899999999999 99999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccccccccCCCCCCCCCcccccchhhhhhhh
Q 014213 128 CYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVNDTVIELPPEYVEPPVTSIAPKVVKEKTK 202 (429)
Q Consensus 128 ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~e~~~~L~p~~~~P~~~~~~a~v~k~~~~ 202 (429)
+|..+|++++|+.+|++|++++|++..++..++.++..+++... .......+. ..|.....+..++....+
T Consensus 476 ~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~---~~P~~~~a~~~lg~~~~~ 546 (681)
T 2pzi_A 476 AELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWS---TNDGVISAAFGLARARSA 546 (681)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHH---HCTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHH---hCCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998777 664433332 234444555555554443
No 98
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.29 E-value=8.1e-11 Score=113.51 Aligned_cols=89 Identities=17% Similarity=0.079 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 014213 84 YLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVK 163 (429)
Q Consensus 84 ~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~ 163 (429)
.++.++|.+|..+ |+|++|+..+++++.++|++..+|+.+|.+|..+|++++|+..|++++.++|++..++..++.++
T Consensus 218 ~~~~~l~~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 295 (368)
T 1fch_A 218 DVQCGLGVLFNLS--GEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC 295 (368)
T ss_dssp HHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc--CCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 3455555555555 56666666666666666655556666666666666666666666666666665555555555555
Q ss_pred HHHHhhccccc
Q 014213 164 KELEKRGLRVN 174 (429)
Q Consensus 164 ~~l~e~~~a~~ 174 (429)
..+++...+..
T Consensus 296 ~~~g~~~~A~~ 306 (368)
T 1fch_A 296 INLGAHREAVE 306 (368)
T ss_dssp HHHTCHHHHHH
T ss_pred HHCCCHHHHHH
Confidence 55554444433
No 99
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.28 E-value=4.2e-11 Score=110.42 Aligned_cols=128 Identities=13% Similarity=0.089 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHc----------------CCCCHHHHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQM----------------GLSEYPRAIHECN 109 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl----------------~~g~y~eAi~~~~ 109 (429)
..+...|..++..|+|++|+..|++++++.|.+.. ...+++++|.+|+.+ ..|++++|+..|+
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~-~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 120 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPN-IDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFS 120 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT-HHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCc-HHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHH
Confidence 46888999999999999999999999999998763 334788899998862 1278999999999
Q ss_pred HHHHhCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHHHhh
Q 014213 110 LALEVTPLYSKAL-----------------LKRARCYEALNRLDLAFRDVTTVLNKEPKNI---MAAEIAERVKKELEKR 169 (429)
Q Consensus 110 ~ALeldP~~~kAl-----------------~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~---~a~~~La~l~~~l~e~ 169 (429)
++++..|++..++ +.+|.+|...|++++|+..|++++...|+++ .++..++.++..+++.
T Consensus 121 ~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~ 200 (225)
T 2yhc_A 121 KLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMN 200 (225)
T ss_dssp HHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCc
Confidence 9999999987654 6789999999999999999999999999986 6788899999999877
Q ss_pred ccccc
Q 014213 170 GLRVN 174 (429)
Q Consensus 170 ~~a~~ 174 (429)
..+..
T Consensus 201 ~~A~~ 205 (225)
T 2yhc_A 201 AQAEK 205 (225)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77665
No 100
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.26 E-value=9.4e-11 Score=94.98 Aligned_cols=101 Identities=26% Similarity=0.367 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKR 125 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~r 125 (429)
..+...|..++..|++++|+..|.+++...|.+.. ++.++|.+|..+ |++++|+..+++++...|.+..+++.+
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~----~~~~l~~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~~~l 109 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE----AWYNLGNAYYKQ--GDYDEAIEYYQKALELDPRSAEAWYNL 109 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHTT--TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchH----HHHHHHHHHHHh--cCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 45777899999999999999999999999998764 889999999999 999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 014213 126 ARCYEALNRLDLAFRDVTTVLNKEPKN 152 (429)
Q Consensus 126 A~ay~~LG~~deAl~~~~kAL~l~P~n 152 (429)
|.+|..+|++++|+..|++++.++|++
T Consensus 110 a~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 110 GNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999864
No 101
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.26 E-value=6.3e-11 Score=105.51 Aligned_cols=125 Identities=16% Similarity=0.079 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--hCCCCHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALE--VTPLYSKAL 122 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALe--ldP~~~kAl 122 (429)
+..+...|..++..|++++|+..|.+++.+.|.+.. ++.++|.+|..+ .|++++|+..++++++ ..|.+..++
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~----~~~~l~~~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~ 116 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAE----INNNYGWFLCGR-LNRPAESMAYFDKALADPTYPTPYIAN 116 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHTT-TCCHHHHHHHHHHHHTSTTCSCHHHHH
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChH----HHHHHHHHHHHh-cCcHHHHHHHHHHHHcCcCCcchHHHH
Confidence 345566666666666666666666666666666553 566666666542 1566666666666666 445556666
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
+.+|.+|..+|++++|+..|++++.+.|++..++..++.++..+++...+..
T Consensus 117 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 168 (225)
T 2vq2_A 117 LNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADY 168 (225)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHH
Confidence 6666666666666666666666666666666666666666666655544444
No 102
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.26 E-value=5.9e-12 Score=107.88 Aligned_cols=110 Identities=9% Similarity=-0.050 Sum_probs=96.2
Q ss_pred HHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 014213 66 LKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTV 145 (429)
Q Consensus 66 ~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kA 145 (429)
..|.+++.++|.+.. .++++|.+++.. |+|++|+..|++++.++|+++.+|+.+|.+|..+|++++|+.+|+++
T Consensus 5 ~~l~~al~~~p~~~~----~~~~~a~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 78 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLE----QLYALGFNQYQA--GKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYG 78 (142)
T ss_dssp ----CCTTCCHHHHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHcCCHHHHH----HHHHHHHHHHHH--ccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 457788888887664 888999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHHHhhcccccc--ccccCC
Q 014213 146 LNKEPKNIMAAEIAERVKKELEKRGLRVND--TVIELP 181 (429)
Q Consensus 146 L~l~P~n~~a~~~La~l~~~l~e~~~a~~e--~~~~L~ 181 (429)
+.++|+++.++..++.++..+++...+... .+..+.
T Consensus 79 l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 79 ALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALA 116 (142)
T ss_dssp HHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 999999999999999999999987777663 344443
No 103
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.25 E-value=3.3e-11 Score=111.24 Aligned_cols=125 Identities=14% Similarity=0.040 Sum_probs=111.0
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 014213 55 LFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNR 134 (429)
Q Consensus 55 lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~ 134 (429)
+...|+|++|+..|+++++..+.+.+..+.++.++|.+|+.+ |+|++|+..|++++.++|.+..+|+.+|.+|..+|+
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~ 92 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSL--GLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGN 92 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTC
T ss_pred cCccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHc--ccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccC
Confidence 334688999999999999987655545667999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc--cccccCC
Q 014213 135 LDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN--DTVIELP 181 (429)
Q Consensus 135 ~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~--e~~~~L~ 181 (429)
+++|+..|++++.++|++..++..++.++..+++...+.. .+...+.
T Consensus 93 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 141 (275)
T 1xnf_A 93 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD 141 (275)
T ss_dssp HHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999987776666 3344444
No 104
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.25 E-value=6.8e-11 Score=114.52 Aligned_cols=133 Identities=12% Similarity=-0.043 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
...+...|..|.+.|++++|+..|+++++++|.+.. .....+.+.+..+.|++++|+..|+++++.+|+++.+|+.
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~----~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~ 205 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQDEDATL----TQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNG 205 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHH----HHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 456778899999999999999999999999987541 2121222222223389999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcccc---ccccccCC
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRV---NDTVIELP 181 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~---~e~~~~L~ 181 (429)
+|.+|..+|++++|+..|++++.++|+++.++..++.+...+++...+. ..+...+.
T Consensus 206 la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~ 265 (291)
T 3mkr_A 206 QAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAH 265 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999998887654332 24455555
No 105
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.23 E-value=4.9e-11 Score=109.45 Aligned_cols=128 Identities=17% Similarity=0.080 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh----
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLL-----PRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV---- 114 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~-----P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel---- 114 (429)
.+..+...|..++..|+|++|+..|.+++.+. +. .+..+.++.++|.+|..+ |+|++|+..+.+++.+
T Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-~~~~~~~~~~l~~~~~~~--g~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 42 VATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKD-HPAVAATLNNLAVLYGKR--GKYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCc-chHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHH
Confidence 45667889999999999999999999999985 32 224567899999999999 9999999999999998
Q ss_pred ----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 115 ----TPLYSKALLKRARCYEALNRLDLAFRDVTTVLNK--------EPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 115 ----dP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l--------~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
+|....+++.+|.+|..+|++++|+..|++++.+ .|....++..++.++..+++...+..
T Consensus 119 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 190 (283)
T 3edt_B 119 LGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAET 190 (283)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 5777889999999999999999999999999999 77778899999999999887666655
No 106
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.22 E-value=2.8e-11 Score=100.56 Aligned_cols=91 Identities=14% Similarity=0.185 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 014213 83 SYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERV 162 (429)
Q Consensus 83 a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l 162 (429)
+..+.++|.+++.. |+|++|+..|+++++++|+++.+|+++|.+|..+|++++|+.+|++++.++|++..++..++.+
T Consensus 4 a~~~~~~g~~~~~~--~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 4 AEEARLEGKEYFTK--SDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh--cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 45789999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccc
Q 014213 163 KKELEKRGLRVND 175 (429)
Q Consensus 163 ~~~l~e~~~a~~e 175 (429)
+..+++...+...
T Consensus 82 ~~~~~~~~~A~~~ 94 (126)
T 3upv_A 82 QIAVKEYASALET 94 (126)
T ss_dssp HHHTTCHHHHHHH
T ss_pred HHHHhCHHHHHHH
Confidence 9999887777663
No 107
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.22 E-value=1.9e-11 Score=103.67 Aligned_cols=98 Identities=12% Similarity=0.096 Sum_probs=83.2
Q ss_pred cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH------
Q 014213 81 DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIM------ 154 (429)
Q Consensus 81 ~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~------ 154 (429)
+.+.++.++|.+|++. |+|++|+..|++||+++|+++.+|+++|.+|..+|+|++|+.+|++++.++|++..
T Consensus 6 d~A~a~~~lG~~~~~~--~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a 83 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQ--KDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIA 83 (127)
T ss_dssp HHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHH
Confidence 3467899999999999 99999999999999999999999999999999999999999999999999987743
Q ss_pred -HHHHHHHHHHHHHhhccccccccccC
Q 014213 155 -AAEIAERVKKELEKRGLRVNDTVIEL 180 (429)
Q Consensus 155 -a~~~La~l~~~l~e~~~a~~e~~~~L 180 (429)
++..++.++..+++...++......|
T Consensus 84 ~~~~~lg~~~~~~~~~~~A~~~~~kal 110 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLSLAVQWFHRSL 110 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 55666667777766666666433333
No 108
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.21 E-value=1.1e-10 Score=98.24 Aligned_cols=95 Identities=8% Similarity=0.012 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 014213 85 LRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKK 164 (429)
Q Consensus 85 l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~ 164 (429)
.++++|.++++. |++++|+..++++++++|++..+|+.+|.+|..+|++++|+..|++++.++|++..++..++.++.
T Consensus 19 ~~~~~g~~~~~~--g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~ 96 (121)
T 1hxi_A 19 NPMEEGLSMLKL--ANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 96 (121)
T ss_dssp CHHHHHHHHHHT--TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHc--CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 467899999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccc--cccccCC
Q 014213 165 ELEKRGLRVN--DTVIELP 181 (429)
Q Consensus 165 ~l~e~~~a~~--e~~~~L~ 181 (429)
.+++...+.. .++..+.
T Consensus 97 ~~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 97 NEHNANAALASLRAWLLSQ 115 (121)
T ss_dssp HHHHHHHHHHHHHHHHC--
T ss_pred HcCCHHHHHHHHHHHHHhC
Confidence 9998877766 3344444
No 109
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.21 E-value=6.5e-11 Score=120.15 Aligned_cols=126 Identities=15% Similarity=0.086 Sum_probs=116.7
Q ss_pred HhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHH
Q 014213 42 IGMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKA 121 (429)
Q Consensus 42 l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kA 121 (429)
...+..+...|..++..|++++|+..|.+++.+.|. . .++.++|.+|+.+ |+|++|+..+++++.++|++..+
T Consensus 240 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~-~----~~~~~l~~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~ 312 (537)
T 3fp2_A 240 ENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPT-P----NSYIFLALTLADK--ENSQEFFKFFQKAVDLNPEYPPT 312 (537)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-H----HHHHHHHHHTCCS--SCCHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCC-c----hHHHHHHHHHHHh--cCHHHHHHHHHHHhccCCCCHHH
Confidence 355677999999999999999999999999999997 4 4888999999998 99999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 122 LLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 122 l~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
++.+|.+|..+|++++|+..|++++.++|++..++..++.++..+++...+..
T Consensus 313 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 365 (537)
T 3fp2_A 313 YYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEA 365 (537)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999887776666
No 110
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.5e-10 Score=92.69 Aligned_cols=91 Identities=11% Similarity=0.053 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHH
Q 014213 83 SYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKN------IMAA 156 (429)
Q Consensus 83 a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n------~~a~ 156 (429)
+..+.++|.+++.+ |+|++|+..|++++.++|.++.+|+++|.+|..+|++++|+.+|++++.++|++ ..++
T Consensus 4 ~~~~~~~g~~~~~~--~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQ--GLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHTT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHc--CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 35789999999999 999999999999999999999999999999999999999999999999999999 8899
Q ss_pred HHHHHHHHHHHhhcccccc
Q 014213 157 EIAERVKKELEKRGLRVND 175 (429)
Q Consensus 157 ~~La~l~~~l~e~~~a~~e 175 (429)
..++.++..++....++..
T Consensus 82 ~~~~~~~~~~~~~~~a~~~ 100 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVE 100 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSS
T ss_pred HHHHHHHHHHHhHhhhHhH
Confidence 9999999998866665543
No 111
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.20 E-value=4.3e-11 Score=112.78 Aligned_cols=108 Identities=15% Similarity=0.096 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKR 125 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~r 125 (429)
..+...|..++..|+|++|+..|++++...|.+.. ++.++|.+|..+ |++++|+..++++++++|.+..+++.+
T Consensus 22 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~----~~~~l~~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~~~~l 95 (327)
T 3cv0_A 22 ENPMEEGLSMLKLANLAEAALAFEAVCQAAPEREE----AWRSLGLTQAEN--EKDGLAIIALNHARMLDPKDIAVHAAL 95 (327)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHhcCcCCHHHHHHH
Confidence 45788999999999999999999999999998774 889999999999 999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 126 ARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIA 159 (429)
Q Consensus 126 A~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~L 159 (429)
|.+|..+|++++|+..|++++.+.|.+..++..+
T Consensus 96 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 129 (327)
T 3cv0_A 96 AVSHTNEHNANAALASLRAWLLSQPQYEQLGSVN 129 (327)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTSTTTTTC----
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 9999999999999999999999999987766665
No 112
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.20 E-value=7.3e-11 Score=116.08 Aligned_cols=124 Identities=18% Similarity=0.148 Sum_probs=114.2
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh------CC
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV------TP 116 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel------dP 116 (429)
..+..+...|..++..|+|++|+..|++++++.|.+....+.++.++|.+|+.+ |+|++|+..+++++++ .|
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYL--GDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHccCch
Confidence 567788999999999999999999999999999988765667899999999999 9999999999999998 67
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHHh
Q 014213 117 LYSKALLKRARCYEALNRLDLAFRDVTTVLNK------EPKNIMAAEIAERVKKELEK 168 (429)
Q Consensus 117 ~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l------~P~n~~a~~~La~l~~~l~e 168 (429)
....+++.+|.+|..+|++++|+..|++++.+ .|....++..++.++..+++
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 78899999999999999999999999999998 56667788999999988888
No 113
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.19 E-value=5.4e-11 Score=103.77 Aligned_cols=98 Identities=21% Similarity=0.136 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 014213 82 VSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAER 161 (429)
Q Consensus 82 ~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~ 161 (429)
.+..+.++|.+|+.. |+|++|+..|+++++++|.+..+|+++|.+|..+|+|++|+.+|++++.++|++..++..++.
T Consensus 10 ~a~~~~~~g~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 87 (164)
T 3sz7_A 10 ESDKLKSEGNAAMAR--KEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGL 87 (164)
T ss_dssp HHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 456899999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccc--ccccCC
Q 014213 162 VKKELEKRGLRVND--TVIELP 181 (429)
Q Consensus 162 l~~~l~e~~~a~~e--~~~~L~ 181 (429)
++..+++...+... ++..+.
T Consensus 88 ~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 88 ARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHhC
Confidence 99999988777773 344444
No 114
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.19 E-value=2.2e-11 Score=127.51 Aligned_cols=113 Identities=13% Similarity=0.078 Sum_probs=88.9
Q ss_pred cCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH
Q 014213 58 KRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDL 137 (429)
Q Consensus 58 ~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~de 137 (429)
.|++++|+..|+++++++|.+.. ++.++|.+|+.+ |+|++|+..++++++++|++..+|+.+|.+|..+|++++
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~----~~~~lg~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~ 75 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFV----AWLMLADAELGM--GDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAE 75 (568)
T ss_dssp -------------------CCHH----HHHHHHHHHHHH--TCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHH
Confidence 47899999999999999998875 999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccccc
Q 014213 138 AFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVNDT 176 (429)
Q Consensus 138 Al~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~e~ 176 (429)
|+..|++++.++|++..++..++.++..+++...+....
T Consensus 76 A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~ 114 (568)
T 2vsy_A 76 AAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAY 114 (568)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 999999999999999999999999999998877776633
No 115
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.19 E-value=9.4e-11 Score=118.99 Aligned_cols=123 Identities=11% Similarity=0.039 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKR 125 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~r 125 (429)
..+...|..++..|+|++|+..|.+++.+.|.+.. ++.++|.+|..+ |+|++|+..+++++.++|.+..+++.+
T Consensus 277 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~----~~~~l~~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~~~~l 350 (537)
T 3fp2_A 277 NSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPP----TYYHRGQMYFIL--QDYKNAKEDFQKAQSLNPENVYPYIQL 350 (537)
T ss_dssp HHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCSHHHHHH
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHH----HHHHHHHHHHhc--CCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 45778899999999999999999999999998875 899999999999 999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 126 ARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 126 A~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
|.+|..+|++++|+..|++++.++|++..++..++.++..+++...+..
T Consensus 351 a~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 399 (537)
T 3fp2_A 351 ACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIK 399 (537)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999999999999999999999999999999999887776665
No 116
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.19 E-value=8.5e-11 Score=112.96 Aligned_cols=137 Identities=7% Similarity=-0.057 Sum_probs=114.3
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--CccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC--
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRN--HIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY-- 118 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~--~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~-- 118 (429)
+.+..+...|+.|...|+|++|+..|.+|+++.+.. +...+.+|.++|.+|..+ |+|++|+..|++|+++.|..
T Consensus 35 ~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~--g~~~~A~~~~~~Al~l~~~~g~ 112 (292)
T 1qqe_A 35 EAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSG--GNSVNAVDSLENAIQIFTHRGQ 112 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHcCC
Confidence 444566777889999999999999999999997543 223467899999999999 99999999999999998754
Q ss_pred ----HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHhhccccc--cccccCC
Q 014213 119 ----SKALLKRARCYEAL-NRLDLAFRDVTTVLNKEPKN------IMAAEIAERVKKELEKRGLRVN--DTVIELP 181 (429)
Q Consensus 119 ----~kAl~~rA~ay~~L-G~~deAl~~~~kAL~l~P~n------~~a~~~La~l~~~l~e~~~a~~--e~~~~L~ 181 (429)
..+|.++|.+|... |++++|+.+|++|+.+.|.+ ..++..++.++..+++...|+. .++..+.
T Consensus 113 ~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 188 (292)
T 1qqe_A 113 FRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSS 188 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 56899999999995 99999999999999998854 4578888999998888777776 4445554
No 117
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.18 E-value=3.5e-10 Score=113.53 Aligned_cols=123 Identities=15% Similarity=0.006 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----CccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC----
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRN-----HIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVT---- 115 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~-----~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld---- 115 (429)
+..+...|..++..|+|++|+..|++|+++.+.. ....+..|.|+|.+|..+ |+|++|+..+++++.+.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~--g~~~~A~~~~~ka~~i~~~~~ 128 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHM--GRLSDVQIYVDKVKHVCEKFS 128 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHc--CChHHHHHHHHHHHHHhHhcc
Confidence 4457789999999999999999999999985321 123456899999999999 99999999999999874
Q ss_pred ----CCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhh
Q 014213 116 ----PLYSKALLKRARCYEALN--RLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKR 169 (429)
Q Consensus 116 ----P~~~kAl~~rA~ay~~LG--~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~ 169 (429)
+..+.++..+|.++..+| +|++|+.+|++|+.++|+++.++..++.+...++..
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~ 188 (472)
T 4g1t_A 129 SPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNW 188 (472)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHS
T ss_pred cccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCc
Confidence 456889999999888765 699999999999999999999999999988777654
No 118
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.18 E-value=2.8e-11 Score=109.17 Aligned_cols=96 Identities=16% Similarity=0.118 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHHh--
Q 014213 83 SYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPL-------YSK-----ALLKRARCYEALNRLDLAFRDVTTVLNK-- 148 (429)
Q Consensus 83 a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~-------~~k-----Al~~rA~ay~~LG~~deAl~~~~kAL~l-- 148 (429)
+..+.++|.+++++ |+|++|+..|++||+++|+ +.. +|+++|.|+..+|+|++|+.+|++||.+
T Consensus 11 a~~~~~~G~~l~~~--g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 11 AYLALSDAQRQLVA--GEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhh
Confidence 56789999999999 9999999999999999999 555 9999999999999999999999999999
Q ss_pred -----CCCCHHHH----HHHHHHHHHHHhhccccccccccC
Q 014213 149 -----EPKNIMAA----EIAERVKKELEKRGLRVNDTVIEL 180 (429)
Q Consensus 149 -----~P~n~~a~----~~La~l~~~l~e~~~a~~e~~~~L 180 (429)
+|++..+| ..++.++..+++...++..+...|
T Consensus 89 ~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAl 129 (159)
T 2hr2_A 89 RRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVV 129 (159)
T ss_dssp HHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHH
Confidence 99999999 999999999999888888544333
No 119
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.17 E-value=4.1e-10 Score=87.11 Aligned_cols=78 Identities=23% Similarity=0.286 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 014213 85 LRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKK 164 (429)
Q Consensus 85 l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~ 164 (429)
++.++|.+|+.+ ++|++|+..|++++.++|.+..+++.+|.+|..+|++++|+..|++++.++|++..++..++.++.
T Consensus 11 ~~~~la~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 11 AWYNLGNAYYKQ--GDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc--cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 444555555555 555555555555555555555555555555555555555555555555555555555555544443
No 120
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.16 E-value=3.9e-10 Score=109.19 Aligned_cols=100 Identities=13% Similarity=0.073 Sum_probs=91.4
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 014213 54 KLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALN 133 (429)
Q Consensus 54 ~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG 133 (429)
.+...|++++|+..|+++++..|.++. +++++|.+|+++ |+|++|+..+++++.++|+++.+|+++|.++..+|
T Consensus 175 l~~~~~~~~eA~~~~~~~l~~~p~~~~----~~~~la~~~~~~--g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g 248 (291)
T 3mkr_A 175 LAAGGEKLQDAYYIFQEMADKCSPTLL----LLNGQAACHMAQ--GRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLG 248 (291)
T ss_dssp HHHCTTHHHHHHHHHHHHHHHSCCCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHhCchHHHHHHHHHHHHHHhCCCcHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 334568999999999999999998874 999999999999 99999999999999999999999999999999999
Q ss_pred CHHH-HHHHHHHHHHhCCCCHHHHHHH
Q 014213 134 RLDL-AFRDVTTVLNKEPKNIMAAEIA 159 (429)
Q Consensus 134 ~~de-Al~~~~kAL~l~P~n~~a~~~L 159 (429)
++++ +..++++++.++|+++.+....
T Consensus 249 ~~~eaa~~~~~~~~~~~P~~~~~~d~~ 275 (291)
T 3mkr_A 249 KPPEVTNRYLSQLKDAHRSHPFIKEYR 275 (291)
T ss_dssp CCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 9976 5689999999999999877643
No 121
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.16 E-value=2.6e-10 Score=95.35 Aligned_cols=130 Identities=13% Similarity=0.107 Sum_probs=108.3
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCC--ccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC--
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNH--IDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY-- 118 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~--~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~-- 118 (429)
..+..+...|..++..|+|++|+..|.+++.+.+... ...+.++.++|.+|+.+ |+|++|+..+++++.+.+..
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~--g~~~~A~~~~~~a~~~~~~~~~ 84 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFL--GEFETASEYYKKTLLLARQLKD 84 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHhCC
Confidence 4567899999999999999999999999999977533 23456899999999999 99999999999999886543
Q ss_pred ----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHHhhccccc
Q 014213 119 ----SKALLKRARCYEALNRLDLAFRDVTTVLNKEPK------NIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 119 ----~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~------n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
..+++.+|.+|..+|++++|+..+++++.+.+. ...++..++.++..+++...+..
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 150 (164)
T 3ro3_A 85 RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMH 150 (164)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHH
Confidence 678999999999999999999999999987432 24567777888877776555544
No 122
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.15 E-value=5.8e-10 Score=86.24 Aligned_cols=84 Identities=25% Similarity=0.326 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALL 123 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~ 123 (429)
.+..+...|..++..|+|++|+..|.+++.+.|.+.. ++.++|.+|+.+ |++++|+..++++++++|.+..+++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~----~~~~l~~~~~~~--~~~~~A~~~~~~a~~~~p~~~~~~~ 81 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAE----AWYNLGNAYYKQ--GDYDEAIEYYQKALELDPNNAEAKQ 81 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHH----HHHHHHHHHHHH--hhHHHHHHHHHHHHhcCCCCHHHHH
Confidence 5778999999999999999999999999999998874 899999999999 9999999999999999999999999
Q ss_pred HHHHHHHHcC
Q 014213 124 KRARCYEALN 133 (429)
Q Consensus 124 ~rA~ay~~LG 133 (429)
.+|.++..+|
T Consensus 82 ~l~~~~~~~g 91 (91)
T 1na3_A 82 NLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 9999998765
No 123
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.15 E-value=1.2e-10 Score=97.14 Aligned_cols=96 Identities=18% Similarity=0.217 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 014213 84 YLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVK 163 (429)
Q Consensus 84 ~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~ 163 (429)
..++++|.+++.. |+|++|+..|++++.++|++..+|+.+|.+|..+|++++|+.+|++++.++|++..++..++.++
T Consensus 10 ~~~~~~g~~~~~~--~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 87 (137)
T 3q49_B 10 QELKEQGNRLFVG--RKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 87 (137)
T ss_dssp HHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh--CcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHH
Confidence 5889999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccc--cccccCC
Q 014213 164 KELEKRGLRVN--DTVIELP 181 (429)
Q Consensus 164 ~~l~e~~~a~~--e~~~~L~ 181 (429)
..+++...+.. ..+..+.
T Consensus 88 ~~~~~~~~A~~~~~~a~~~~ 107 (137)
T 3q49_B 88 LEMESYDEAIANLQRAYSLA 107 (137)
T ss_dssp HHTTCHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHC
Confidence 99988777666 3344443
No 124
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.14 E-value=2.2e-10 Score=107.07 Aligned_cols=122 Identities=19% Similarity=0.168 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh------CCCC
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV------TPLY 118 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel------dP~~ 118 (429)
+..+...|..++..|+|++|+..|++++.+.|.+....+.++.++|.+|+.+ |+|++|+..+++++.+ .|..
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~ 82 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYL--HDYAKALEYHHHDLTLARTIGDQLGE 82 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHhhcccccHHH
Confidence 4678889999999999999999999999999988765667899999999999 9999999999999988 4556
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHh
Q 014213 119 SKALLKRARCYEALNRLDLAFRDVTTVLNKEPKN------IMAAEIAERVKKELEK 168 (429)
Q Consensus 119 ~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n------~~a~~~La~l~~~l~e 168 (429)
..+++.+|.+|..+|++++|+..|++++.+.|.. ..++..++.++..+++
T Consensus 83 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 7899999999999999999999999999986643 3377788888888777
No 125
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.14 E-value=2.6e-10 Score=117.81 Aligned_cols=124 Identities=11% Similarity=0.031 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
...+...|..|.+.|++++|+..|++++...|.+.. ++.+++.+|.+. |++++|+..++++++++|.++.+|+.
T Consensus 407 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~----~~~~l~~~~~~~--g~~~~A~~~~~~~~~~~~~~~~~~~~ 480 (597)
T 2xpi_A 407 GPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHL----PYLFLGMQHMQL--GNILLANEYLQSSYALFQYDPLLLNE 480 (597)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSH----HHHHHHHHHHHH--TCHHHHHHHHHHHHHHCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 445666777777777777777777777777776653 666666666666 67777777777777777766666767
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh------CCCC-HHHHHHHHHHHHHHHhhccccc
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNK------EPKN-IMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l------~P~n-~~a~~~La~l~~~l~e~~~a~~ 174 (429)
+|.+|...|++++|+..|++++.+ +|++ ..++..++.++...++...+..
T Consensus 481 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~ 537 (597)
T 2xpi_A 481 LGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAID 537 (597)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHH
Confidence 777777777777777777666666 4543 5666666666666665554444
No 126
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.13 E-value=9.2e-11 Score=93.27 Aligned_cols=67 Identities=12% Similarity=0.185 Sum_probs=32.9
Q ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 88 NMAACYMQMGLSEYPRAIHECNLALEVTPLYSK-ALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAA 156 (429)
Q Consensus 88 nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~k-Al~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~ 156 (429)
++|.+++.. |+|++|+..|+++++++|++.. +++.+|.+|..+|++++|+..|++++.++|++..++
T Consensus 5 ~~a~~~~~~--~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 5 KTIKELINQ--GDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHHH--TCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHc--CCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 344444444 4455555555555555554444 455555555555555555555555555555444444
No 127
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.12 E-value=1.3e-10 Score=92.12 Aligned_cols=94 Identities=16% Similarity=0.058 Sum_probs=87.2
Q ss_pred CCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--C
Q 014213 75 LPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPK--N 152 (429)
Q Consensus 75 ~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~--n 152 (429)
+|.+.. ++.++|.+|+.+ |+|++|+..++++++++|.+..+++.+|.+|..+|++++|+..|++++.++|+ +
T Consensus 2 ~p~~~~----~~~~~~~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 75 (112)
T 2kck_A 2 VDQNPE----EYYLEGVLQYDA--GNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYN 75 (112)
T ss_dssp CCSSTT----GGGGHHHHHHSS--CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTC
T ss_pred CCCcHH----HHHHHHHHHHHh--hhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccch
Confidence 566664 788999999999 99999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHHHHHHH-Hhhccccc
Q 014213 153 IMAAEIAERVKKEL-EKRGLRVN 174 (429)
Q Consensus 153 ~~a~~~La~l~~~l-~e~~~a~~ 174 (429)
..++..++.++..+ ++...+..
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~A~~ 98 (112)
T 2kck_A 76 KDVWAAKADALRYIEGKEVEAEI 98 (112)
T ss_dssp HHHHHHHHHHHTTCSSCSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999999988 87666665
No 128
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.11 E-value=3.7e-10 Score=109.60 Aligned_cols=122 Identities=19% Similarity=0.168 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh------CCCC
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV------TPLY 118 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel------dP~~ 118 (429)
+..+...|..++..|+|++|+..|++++.+.|.++...+.++.++|.+|+.+ |+|++|+..+++++.+ .|..
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~ 86 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYL--HDYAKALEYHHHDLTLARTIGDQLGE 86 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHhccccHHH
Confidence 4578899999999999999999999999999988765667899999999999 9999999999999988 4556
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHh
Q 014213 119 SKALLKRARCYEALNRLDLAFRDVTTVLNKEPKN------IMAAEIAERVKKELEK 168 (429)
Q Consensus 119 ~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n------~~a~~~La~l~~~l~e 168 (429)
..+++.+|.+|..+|++++|+..|++++.+.|.. ..++..++.++..+++
T Consensus 87 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 87 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 7899999999999999999999999999987643 4478888888888887
No 129
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.11 E-value=9.7e-10 Score=113.45 Aligned_cols=124 Identities=16% Similarity=0.037 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..|++.|++++|+..|++++...|.+.. ++..++.+|.++ |++++|+..+++++..+|++..+++.
T Consensus 305 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~----~~~~l~~~~~~~--g~~~~A~~~~~~~~~~~~~~~~~~~~ 378 (597)
T 2xpi_A 305 SDLLLCKADTLFVRSRFIDVLAITTKILEIDPYNLD----VYPLHLASLHES--GEKNKLYLISNDLVDRHPEKAVTWLA 378 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCCT----THHHHHHHHHHH--TCHHHHHHHHHHHHHHCTTSHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCcccHH----HHHHHHHHHHHh--CCHHHHHHHHHHHHhhCcccHHHHHH
Confidence 456788999999999999999999999999998875 788889999998 99999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
+|.+|...|++++|+..|++++.++|++..++..++.++...++...+..
T Consensus 379 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 428 (597)
T 2xpi_A 379 VGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAIS 428 (597)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 99999999999999999999999999999999999998888887666665
No 130
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.10 E-value=1.9e-10 Score=105.45 Aligned_cols=102 Identities=18% Similarity=0.103 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh----
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLL-----PRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV---- 114 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~-----P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel---- 114 (429)
.+..+...|..++..|+|++|+..|.+|+.+. +.+ +....++.++|.+|+.+ |+|++|+..+++++.+
T Consensus 84 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~~~la~~~~~~--g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 84 VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFH-PDVAKQLNNLALLCQNQ--GKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCC-hHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHh
Confidence 45678889999999999999999999999984 222 23457899999999999 9999999999999999
Q ss_pred ----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 115 ----TPLYSKALLKRARCYEALNRLDLAFRDVTTVLNK 148 (429)
Q Consensus 115 ----dP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l 148 (429)
.|....+++.+|.+|..+|++++|+..|++++.+
T Consensus 161 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 161 LGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 7778899999999999999999999999999987
No 131
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.10 E-value=1.2e-10 Score=117.04 Aligned_cols=113 Identities=15% Similarity=0.029 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 014213 47 ELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRA 126 (429)
Q Consensus 47 ~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA 126 (429)
.+...|..++..|++++|+..|.+++.+.|.+.. ++.++|.+|..+ |++++|+..+++++..+|.+..+++.+|
T Consensus 306 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~----~~~~l~~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~~~la 379 (514)
T 2gw1_A 306 VYYHRGQMNFILQNYDQAGKDFDKAKELDPENIF----PYIQLACLAYRE--NKFDDCETLFSEAKRKFPEAPEVPNFFA 379 (514)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSH----HHHHHHHHTTTT--TCHHHHHHHHHHHHHHSTTCSHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHHcccCHHHHHHHH
Confidence 3455555555555555555555555555555442 555555555555 5555555555555555555555555555
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHH
Q 014213 127 RCYEALNRLDLAFRDVTTVLNKEPKNIM------AAEIAERVKKE 165 (429)
Q Consensus 127 ~ay~~LG~~deAl~~~~kAL~l~P~n~~------a~~~La~l~~~ 165 (429)
.+|..+|++++|+..|++++.+.|++.. ++..++.++..
T Consensus 380 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~ 424 (514)
T 2gw1_A 380 EILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTR 424 (514)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHT
T ss_pred HHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhh
Confidence 5555555555555555555555555433 55555555554
No 132
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.09 E-value=4e-10 Score=111.14 Aligned_cols=130 Identities=11% Similarity=0.105 Sum_probs=111.8
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc---cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC-
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI---DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY- 118 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~---~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~- 118 (429)
..+..+...|..++..|+++.|+..|.+|+.+.+.... ..+.++.++|.+|..+ |+|++|+..+++|+++.+..
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~--g~~~~A~~~~~~al~~~~~~~ 218 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDL--KQYEDAISHFQKAYSMAEAEK 218 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHcC
Confidence 35677899999999999999999999999999776542 3567899999999999 99999999999999886533
Q ss_pred -----HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hC-CCCHHHHHHHHHHHHHHHhhccccc
Q 014213 119 -----SKALLKRARCYEALNRLDLAFRDVTTVLN-----KE-PKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 119 -----~kAl~~rA~ay~~LG~~deAl~~~~kAL~-----l~-P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
..+++++|.+|..+|++++|+.+|++++. .+ |....++..++.++..+++...|..
T Consensus 219 ~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 285 (383)
T 3ulq_A 219 QPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHE 285 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHH
Confidence 35899999999999999999999999999 46 7788899999999988887666655
No 133
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.09 E-value=6.7e-10 Score=109.69 Aligned_cols=99 Identities=14% Similarity=0.072 Sum_probs=90.9
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKAL 122 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl 122 (429)
..+..+.+.|..|+..|+|++|+..|++||+++|.+.. +|+++|.+|+.+ |+|++|+..|++|++++|++..++
T Consensus 194 ~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~----a~~~lg~~~~~~--g~~~~A~~~~~~al~l~P~~~~a~ 267 (336)
T 1p5q_A 194 LRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEK----GLSRRGEAHLAV--NDFELARADFQKVLQLYPNNKAAK 267 (336)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCSSCHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH----HHHHHHHHHHHC--CCHHHHHHHHHHHHHHCCCCHHHH
Confidence 34678999999999999999999999999999999874 999999999999 999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHH-HHHHHHHHH
Q 014213 123 LKRARCYEALNRLDLA-FRDVTTVLN 147 (429)
Q Consensus 123 ~~rA~ay~~LG~~deA-l~~~~kAL~ 147 (429)
+.++.++..+|++++| ...|.+++.
T Consensus 268 ~~l~~~~~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 268 TQLAVCQQRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 446665554
No 134
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.09 E-value=1.4e-11 Score=126.97 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=103.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC---------------HHHHH
Q 014213 59 RDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY---------------SKALL 123 (429)
Q Consensus 59 gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~---------------~kAl~ 123 (429)
++|++|+..|..++...|... .++.++|.+|+++ |+|++|+..|++|++++|.+ ..+|+
T Consensus 248 ~~~~~A~~~~~~~~~~~~~~a----~~~~~~G~~~~~~--g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~ 321 (457)
T 1kt0_A 248 KSFEKAKESWEMDTKEKLEQA----AIVKEKGTVYFKG--GKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFL 321 (457)
T ss_dssp EEEECCCCGGGSCHHHHHHHH----HHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHH
T ss_pred hhcccCcchhhcCHHHHHHHH----HHHHHHHHHHHhC--CCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHH
Confidence 456677778888888777655 4899999999999 99999999999999999998 79999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccccc--cccCC
Q 014213 124 KRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVNDT--VIELP 181 (429)
Q Consensus 124 ~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~e~--~~~L~ 181 (429)
++|.||..+|+|++|+.+|++||.++|++..++..++.++..+++...|.... +..+.
T Consensus 322 nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~ 381 (457)
T 1kt0_A 322 NLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVN 381 (457)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999888877744 44454
No 135
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.09 E-value=6.4e-10 Score=90.10 Aligned_cols=86 Identities=17% Similarity=0.191 Sum_probs=72.8
Q ss_pred CCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--C
Q 014213 75 LPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPK--N 152 (429)
Q Consensus 75 ~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~--n 152 (429)
+|.+. .+++++|.+|+.+ |+|++|+..|+++++++|+++.+|+.+|.+|..+|++++|+..|++++.+.|. +
T Consensus 3 ~p~~~----~~~~~lg~~~~~~--g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~ 76 (100)
T 3ma5_A 3 DPEDP----FTRYALAQEHLKH--DNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGT 76 (100)
T ss_dssp --CCH----HHHHHHHHHHHHT--TCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred CccCH----HHHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCc
Confidence 56666 4899999999999 99999999999999999999999999999999999999999999999999774 4
Q ss_pred HHHHHHHHHHHHHH
Q 014213 153 IMAAEIAERVKKEL 166 (429)
Q Consensus 153 ~~a~~~La~l~~~l 166 (429)
..+...+..++...
T Consensus 77 ~~~~~~l~~~l~~~ 90 (100)
T 3ma5_A 77 QKDLSELQDAKLKA 90 (100)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHc
Confidence 55555555554433
No 136
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.08 E-value=1.3e-09 Score=92.81 Aligned_cols=98 Identities=14% Similarity=0.068 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..++..|+|++|+..|.+++.++|.+.. ++.++|.+|..+ |++++|+..+.+++.++|.+..++..
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~----~~~~~a~~~~~~--~~~~~A~~~~~~a~~~~p~~~~~~~~ 120 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIK----GYYRRAASNMAL--GKFRAALRDYETVVKVKPHDKDAKMK 120 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHH----HHHHHHHHHHHh--ccHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 456788999999999999999999999999998874 899999999999 99999999999999999999998855
Q ss_pred HH--HHHHHcCCHHHHHHHHHHHHHh
Q 014213 125 RA--RCYEALNRLDLAFRDVTTVLNK 148 (429)
Q Consensus 125 rA--~ay~~LG~~deAl~~~~kAL~l 148 (429)
++ ..+..+|++++|+..+.++..+
T Consensus 121 ~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 121 YQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcccchHHH
Confidence 54 4488889999999998876554
No 137
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.07 E-value=1.1e-09 Score=87.21 Aligned_cols=91 Identities=10% Similarity=0.041 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 014213 83 SYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERV 162 (429)
Q Consensus 83 a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l 162 (429)
+..+.++|.+++.. |+|++|+..+++++.++|.+..+++.+|.+|..+|++++|+..+++++.++|++..++..++.+
T Consensus 4 ~~~~~~~~~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 4 VNELKEKGNKALSV--GNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc--ccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 45788999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccccc
Q 014213 163 KKELEKRGLRVND 175 (429)
Q Consensus 163 ~~~l~e~~~a~~e 175 (429)
+..+++...+...
T Consensus 82 ~~~~~~~~~A~~~ 94 (118)
T 1elw_A 82 LEFLNRFEEAKRT 94 (118)
T ss_dssp HHHTTCHHHHHHH
T ss_pred HHHHhhHHHHHHH
Confidence 9998877766663
No 138
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.05 E-value=2.3e-09 Score=114.24 Aligned_cols=145 Identities=11% Similarity=-0.036 Sum_probs=117.4
Q ss_pred hHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCC----------HHHHHHHHHHH
Q 014213 43 GMSQELKEEGNKLFQKRDH-GGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSE----------YPRAIHECNLA 111 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdy-eeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~----------y~eAi~~~~~A 111 (429)
+.-..+......+.+.+.| ++|+..|+++|.++|.+. ++|++|+.++..+ ++ |++|+..++++
T Consensus 26 ~~y~~~~~~~~~~~~~~~~~eeal~~~~~~l~~nP~~~----taW~~R~~~l~~l--~~~~~~~~~~~~~~~eL~~~~~~ 99 (567)
T 1dce_A 26 KLYQSATQAVFQKRQAGELDESVLELTSQILGANPDFA----TLWNCRREVLQHL--ETEKSPEESAALVKAELGFLESC 99 (567)
T ss_dssp HHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHH--HTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhH----HHHHHHHHHHHhc--ccccchhhhhhhHHHHHHHHHHH
Confidence 3334444445556667776 678999999999999988 4999999999999 88 99999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH-hhccccccccccCCCCCCCCC
Q 014213 112 LEVTPLYSKALLKRARCYEALN--RLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELE-KRGLRVNDTVIELPPEYVEPP 188 (429)
Q Consensus 112 LeldP~~~kAl~~rA~ay~~LG--~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~-e~~~a~~e~~~~L~p~~~~P~ 188 (429)
++.+|++..+|+.|+.++..++ ++++|+.+++++++++|.|..+|.....+...++ ....++......+. ..|.
T Consensus 100 l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~---~~p~ 176 (567)
T 1dce_A 100 LRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLIT---RNFS 176 (567)
T ss_dssp HHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTT---TTCC
T ss_pred HHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHH---HCCC
Confidence 9999999999999999999999 7799999999999999999999999999998887 33444442233333 4466
Q ss_pred cccccchh
Q 014213 189 VTSIAPKV 196 (429)
Q Consensus 189 ~~~~~a~v 196 (429)
...+|.-.
T Consensus 177 n~saW~~r 184 (567)
T 1dce_A 177 NYSSWHYR 184 (567)
T ss_dssp CHHHHHHH
T ss_pred CccHHHHH
Confidence 66666643
No 139
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.04 E-value=2.2e-10 Score=99.69 Aligned_cols=98 Identities=16% Similarity=0.084 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 014213 82 VSYLRSNMAACYMQMGLSEYPRAIHECNLALEV------------------TPLYSKALLKRARCYEALNRLDLAFRDVT 143 (429)
Q Consensus 82 ~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel------------------dP~~~kAl~~rA~ay~~LG~~deAl~~~~ 143 (429)
.+..+.++|..+++. |+|++|+..|++||.+ +|.+..+|+++|.||..+|+|++|+.+|+
T Consensus 10 ~a~~~~~~G~~~~~~--~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~ 87 (162)
T 3rkv_A 10 SVEALRQKGNELFVQ--KDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSS 87 (162)
T ss_dssp HHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 456889999999999 9999999999999999 78888999999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHHhhccccccc--cccCC
Q 014213 144 TVLNKEPKNIMAAEIAERVKKELEKRGLRVNDT--VIELP 181 (429)
Q Consensus 144 kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~e~--~~~L~ 181 (429)
+++.++|++..++..++.++..+++...+.... +..+.
T Consensus 88 ~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~ 127 (162)
T 3rkv_A 88 EVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNH 127 (162)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcC
Confidence 999999999999999999999999888877744 44454
No 140
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.04 E-value=7.4e-10 Score=117.98 Aligned_cols=118 Identities=10% Similarity=0.023 Sum_probs=111.1
Q ss_pred hHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCC--CHHHHHHHHHH
Q 014213 43 GMSQELKEEGNKLFQKRD----------HGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLS--EYPRAIHECNL 110 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gd----------yeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g--~y~eAi~~~~~ 110 (429)
+....|..+|..+...++ |++|+..|++||+.+|++.. +|++|+.++.++ + +|++|+..|++
T Consensus 61 ~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~----aW~hR~w~l~~l--~~~~~~~el~~~~k 134 (567)
T 1dce_A 61 DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYG----TWHHRCWLLSRL--PEPNWARELELCAR 134 (567)
T ss_dssp TCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHTC--SSCCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHc--ccccHHHHHHHHHH
Confidence 344568889999998888 99999999999999999985 999999999999 8 77999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 014213 111 ALEVTPLYSKALLKRARCYEALN-RLDLAFRDVTTVLNKEPKNIMAAEIAERVKKEL 166 (429)
Q Consensus 111 ALeldP~~~kAl~~rA~ay~~LG-~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l 166 (429)
+++++|++..||+.|+.++..+| .+++|++++++++..+|+|..+|..+..+...+
T Consensus 135 ~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 135 FLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhh
Confidence 99999999999999999999999 999999999999999999999999999998887
No 141
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.04 E-value=9.3e-10 Score=102.80 Aligned_cols=128 Identities=17% Similarity=0.096 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----CCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC-----
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLP----RNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVT----- 115 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P----~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld----- 115 (429)
+..+...|..++..|+|++|+..|.+++.+.. .+......++.++|.+|..+ |+|++|+..+.+++.+.
T Consensus 69 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~--g~~~~A~~~~~~a~~~~~~~~~ 146 (311)
T 3nf1_A 69 ATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKR--GKYKEAEPLCKRALEIREKVLG 146 (311)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHc--CcHHHHHHHHHHHHHHHHHhcC
Confidence 45577899999999999999999999999851 11224557899999999999 99999999999999884
Q ss_pred ---CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 116 ---PLYSKALLKRARCYEALNRLDLAFRDVTTVLNK--------EPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 116 ---P~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l--------~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
|....+++.+|.+|..+|++++|+..|++++.+ .|....++..++.++..+++...+..
T Consensus 147 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 216 (311)
T 3nf1_A 147 KDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAET 216 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 667789999999999999999999999999998 77777889999999998887666655
No 142
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.03 E-value=3.8e-09 Score=100.95 Aligned_cols=123 Identities=14% Similarity=0.055 Sum_probs=84.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc--cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH---HhCCCCH---
Q 014213 48 LKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI--DVSYLRSNMAACYMQMGLSEYPRAIHECNLAL---EVTPLYS--- 119 (429)
Q Consensus 48 lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~--~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~AL---eldP~~~--- 119 (429)
+...|..+...|+|++|+..|.+|+.+.+.... ..+.+++++|.+|..+ |+|++|+..+++|+ +..|++.
T Consensus 118 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~--~~~~~A~~~~~kal~~~~~~~~~~~~~ 195 (293)
T 2qfc_A 118 QYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAEN--GYLKKGIDLFEQILKQLEALHDNEEFD 195 (293)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhcCccccch
Confidence 445666677777777777777777776654322 1245777788888877 78888888888877 4455532
Q ss_pred -HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHHhhccc
Q 014213 120 -KALLKRARCYEALNRLDLAFRDVTTVLNKEPK------NIMAAEIAERVKKELEKRGLR 172 (429)
Q Consensus 120 -kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~------n~~a~~~La~l~~~l~e~~~a 172 (429)
.+|+++|.+|..+|+|++|+.+|++++.+.+. -..++..++.++..+++...|
T Consensus 196 ~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A 255 (293)
T 2qfc_A 196 VKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 57778888888888888888888888776532 156667777777776655444
No 143
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.03 E-value=1.3e-09 Score=101.80 Aligned_cols=102 Identities=20% Similarity=0.175 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh----
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLL-----PRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV---- 114 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~-----P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel---- 114 (429)
.+..+...|..++..|+|++|+..|.+++.+. +. ......++.++|.+|..+ |++++|+..+++++.+
T Consensus 110 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~-~~~~~~~~~~la~~~~~~--~~~~~A~~~~~~a~~~~~~~ 186 (311)
T 3nf1_A 110 VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKD-HPDVAKQLNNLALLCQNQ--GKYEEVEYYYQRALEIYQTK 186 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCC-ChHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHH
Confidence 35668889999999999999999999999985 32 224567899999999999 9999999999999998
Q ss_pred ----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 115 ----TPLYSKALLKRARCYEALNRLDLAFRDVTTVLNK 148 (429)
Q Consensus 115 ----dP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l 148 (429)
.|....+++.+|.+|..+|++++|+..|++++.+
T Consensus 187 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 187 LGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 7778889999999999999999999999999985
No 144
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.02 E-value=1.2e-09 Score=109.72 Aligned_cols=121 Identities=12% Similarity=0.019 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----CccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRN----HIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKA 121 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~----~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kA 121 (429)
..+.+.|..|+..|+|++|+.+|++++++.+.. ....+.+++++|.+++.++.++|++|+..|++|++++|+++.+
T Consensus 95 ~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~ 174 (472)
T 4g1t_A 95 VTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEF 174 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHH
Confidence 346789999999999999999999999986532 1134568899999998885568999999999999999999999
Q ss_pred HHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 014213 122 LLKRARCYEA---LNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKEL 166 (429)
Q Consensus 122 l~~rA~ay~~---LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l 166 (429)
++.+|.++.. .+++++|+..|++|+.++|++..++..++.....+
T Consensus 175 ~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~ 222 (472)
T 4g1t_A 175 TSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKM 222 (472)
T ss_dssp HHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHH
Confidence 9999988654 56778999999999999999999988887665544
No 145
>1oey_A P67-PHOX, neutrophil cytosol factor 2; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=99.01 E-value=9.1e-10 Score=88.48 Aligned_cols=77 Identities=16% Similarity=0.215 Sum_probs=67.7
Q ss_pred CceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECC-CCCEEEecChHHHHHHHHhhccCCcEEEEE
Q 014213 260 PKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDE-EGDLVTITTDEELRWAEASAEMQGSVRLFV 337 (429)
Q Consensus 260 ~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~De-dgDliti~~~~dl~~a~~~~~~~~~~rl~v 337 (429)
...+|||||. |+..+.+|..++|.+|+++|++|++. ....++.|+|+ +|.+| |.+++||+.|.+.+. .+.+.||+
T Consensus 4 ~~~~VKV~~~-~tvairvp~~~~y~~L~~~l~~kL~l~~~~~~LsYk~~~s~~~v-i~~d~dl~~aw~~~~-n~~LtL~C 80 (83)
T 1oey_A 4 MAYTLKVHYK-YTVVMKTQPGLPYSQVRDMVSKKLELRLEHTKLSYRPRDSNELV-PLSEDSMKDAWGQVK-NYCLTLWC 80 (83)
T ss_dssp SCEEEEEESS-SEEEEEECTTCCHHHHHHHHHHHTTCCGGGCCEEECCTTCSSCE-ECCTTTHHHHHTTCB-TTEEEEEE
T ss_pred CcEEEEEEEE-EEEEEECCCCCCHHHHHHHHHHHhCCCcceeEEEeeCCCCCCee-ccChHHHHHHHHhcc-CCcEEEEE
Confidence 4589999997 99999999999999999999999965 45699999995 66889 999999999999865 44699998
Q ss_pred Ee
Q 014213 338 VG 339 (429)
Q Consensus 338 ~e 339 (429)
..
T Consensus 81 ~~ 82 (83)
T 1oey_A 81 EN 82 (83)
T ss_dssp CC
T ss_pred ec
Confidence 64
No 146
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.01 E-value=1.3e-09 Score=107.57 Aligned_cols=130 Identities=11% Similarity=0.057 Sum_probs=107.5
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc---cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCC---
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI---DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTP--- 116 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~---~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP--- 116 (429)
..+..+...|..++..|+++.|+..|.+|+.+.+.... ..+.++.++|.+|..+ |+|++|+..+.+|+++.+
T Consensus 139 ~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~--~~~~~A~~~~~~al~~~~~~~ 216 (378)
T 3q15_A 139 EKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDF--KHYDKALPHLEAALELAMDIQ 216 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHcC
Confidence 45677888899999999999999999999988775432 3567888999999998 999999999999998743
Q ss_pred ---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 117 ---LYSKALLKRARCYEALNRLDLAFRDVTTVLN-----KEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 117 ---~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~-----l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
....+++++|.+|..+|++++|+.+|++++. .+|....++..++.++..+++...|..
T Consensus 217 ~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 282 (378)
T 3q15_A 217 NDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQ 282 (378)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHH
Confidence 1245788999999999999999999999998 678778888899999888887666655
No 147
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.00 E-value=6.1e-09 Score=97.41 Aligned_cols=118 Identities=17% Similarity=0.138 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHH----cCCCCHHHHHHHHHHHHHhCCCCHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQ----MGLSEYPRAIHECNLALEVTPLYSK 120 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~k----l~~g~y~eAi~~~~~ALeldP~~~k 120 (429)
+..+...|..++..|++++|+..|++|++ |.+. .++.++|.+|.. . +++++|+..++++++++ ++.
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--~~~~----~a~~~lg~~~~~g~~~~--~~~~~A~~~~~~a~~~~--~~~ 75 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD--LKEN----SGCFNLGVLYYQGQGVE--KNLKKAASFYAKACDLN--YSN 75 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--TTCH----HHHHHHHHHHHHTSSSC--CCHHHHHHHHHHHHHTT--CHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH--CCCH----HHHHHHHHHHHcCCCcC--CCHHHHHHHHHHHHHCC--CHH
Confidence 45678889999999999999999999998 5554 378889999998 8 89999999999998886 788
Q ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----HHhhccccc
Q 014213 121 ALLKRARCYEA----LNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKE----LEKRGLRVN 174 (429)
Q Consensus 121 Al~~rA~ay~~----LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~----l~e~~~a~~ 174 (429)
+++.+|.+|.. .+++++|+..|++++.+ +++.++..++.++.. .++...+..
T Consensus 76 a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~~~A~~ 135 (273)
T 1ouv_A 76 GCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDFKKAVE 135 (273)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHH
T ss_pred HHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCHHHHHH
Confidence 99999999999 99999999999999987 478888888888877 555555444
No 148
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.00 E-value=2.8e-09 Score=102.82 Aligned_cols=124 Identities=8% Similarity=-0.144 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKR 125 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~r 125 (429)
..|...|..+...|++++|...|++||++.|.+.. .+|.+++.++.++ |++++|+..|++|++++|.+..+|+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~~~~~--~~~~~A~~~~~~a~~~~p~~~~~~~~~ 174 (308)
T 2ond_A 100 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPT---LVYIQYMKFARRA--EGIKSGRMIFKKAREDARTRHHVYVTA 174 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTH---HHHHHHHHHHHHH--HCHHHHHHHHHHHHTSTTCCTHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCcc---HHHHHHHHHHHHh--cCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 45778899999999999999999999999998762 3789999999998 999999999999999999998888877
Q ss_pred HHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 126 ARCYEA-LNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 126 A~ay~~-LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
+..... +|++++|+..|++++.+.|+++.++..++.++..+++...+..
T Consensus 175 a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~ 224 (308)
T 2ond_A 175 ALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRV 224 (308)
T ss_dssp HHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHH
Confidence 666443 7999999999999999999999999999988877776555544
No 149
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.99 E-value=2.1e-09 Score=102.81 Aligned_cols=127 Identities=13% Similarity=0.045 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc--cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh-------CC
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI--DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV-------TP 116 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~--~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel-------dP 116 (429)
.-+...|..++..++|++|+..|.+|+.+.+.... ..+.++.++|.+|..+ |+|++|+..+++|+++ .+
T Consensus 116 ~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~--g~~~~A~~~~~~al~~~~~~~~~~~ 193 (293)
T 3u3w_A 116 QWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAEN--GYLKKGIDLFEQILKQLEALHDNEE 193 (293)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred HHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhcccchh
Confidence 34445888888889999999999999997665443 2355789999999999 9999999999999953 12
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHhh-ccccc
Q 014213 117 LYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKN------IMAAEIAERVKKELEKR-GLRVN 174 (429)
Q Consensus 117 ~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n------~~a~~~La~l~~~l~e~-~~a~~ 174 (429)
....+|+++|.+|..+|+|++|+.++++++.+.+.. ..++..++.++..+++. ..|..
T Consensus 194 ~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~ 258 (293)
T 3u3w_A 194 FDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIED 258 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHH
Confidence 345689999999999999999999999999986544 77888999999888742 44444
No 150
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.99 E-value=2.1e-09 Score=102.74 Aligned_cols=102 Identities=17% Similarity=0.072 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC---
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLP---RNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY--- 118 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P---~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~--- 118 (429)
+..+...|..|+..|+|++|+.+|++|++... .+....+.+++|+|.+|..+ |+|++|+..+++|+++.+..
T Consensus 155 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~--~~y~~A~~~~~~al~~~~~~~~~ 232 (293)
T 3u3w_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLD--SRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHcCcH
Confidence 45689999999999999999999999997543 34445677999999999999 99999999999999987543
Q ss_pred ---HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHh
Q 014213 119 ---SKALLKRARCYEALN-RLDLAFRDVTTVLNK 148 (429)
Q Consensus 119 ---~kAl~~rA~ay~~LG-~~deAl~~~~kAL~l 148 (429)
..+|+++|.+|..+| .+++|+.+|++|+.+
T Consensus 233 ~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp TTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 789999999999999 579999999999986
No 151
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.99 E-value=1.7e-09 Score=104.89 Aligned_cols=128 Identities=13% Similarity=0.089 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc--cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC----
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI--DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY---- 118 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~--~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~---- 118 (429)
+..+...|..++..|+|++|+..|.+++.+.+.... ..+.++.++|.+|..+ |++++|+..+++++.+.|..
T Consensus 187 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~ 264 (406)
T 3sf4_A 187 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFL--GEFETASEYYKKTLLLARQLKDRA 264 (406)
T ss_dssp HHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc--CChHHHHHHHHHHHHHHHhCcCch
Confidence 445778899999999999999999999999876543 3466899999999999 99999999999999998766
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHhhccccc
Q 014213 119 --SKALLKRARCYEALNRLDLAFRDVTTVLNKEPKN------IMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 119 --~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n------~~a~~~La~l~~~l~e~~~a~~ 174 (429)
..+++.+|.+|..+|++++|+..|++++.+.+.. ..++..++.++..+++...+..
T Consensus 265 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 328 (406)
T 3sf4_A 265 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMH 328 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 7899999999999999999999999999986544 6688889999988887666655
No 152
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.99 E-value=1.5e-09 Score=104.91 Aligned_cols=127 Identities=13% Similarity=-0.000 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--CccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC----
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRN--HIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY---- 118 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~--~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~---- 118 (429)
+..+.+.|+.|...|+|++|+.+|++|+++.+.. ....+.++.++|.+|.. |+|++|+..|++|+++.|..
T Consensus 76 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~---g~~~~A~~~~~~Al~~~~~~~~~~ 152 (307)
T 2ifu_A 76 AKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP---LDLSKAVHLYQQAAAVFENEERLR 152 (307)
T ss_dssp HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT---TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHhCCChh
Confidence 4566778888888888888888888888886543 22345678888888854 88999999999988887643
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHHhhccccc
Q 014213 119 --SKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNI------MAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 119 --~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~------~a~~~La~l~~~l~e~~~a~~ 174 (429)
..+++++|.+|..+|+|++|+.+|++++.+.|.+. .++..++.++..+++...+..
T Consensus 153 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~ 216 (307)
T 2ifu_A 153 QAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQK 216 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 56788889999999999999999999988866442 245555556665566555555
No 153
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.98 E-value=3.2e-09 Score=104.69 Aligned_cols=106 Identities=15% Similarity=0.131 Sum_probs=95.1
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCC--ccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-----hC
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNH--IDVSYLRSNMAACYMQMGLSEYPRAIHECNLALE-----VT 115 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~--~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALe-----ld 115 (429)
..+..+...|..++..|+|++|+..|.+|+++.+... ...+.++.|+|.+|..+ |+|++|+..+++|++ .+
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~--g~~~~A~~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQ--SQYEDAIPYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHhhcc
Confidence 3456788999999999999999999999999977543 24567899999999999 999999999999999 46
Q ss_pred -CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 014213 116 -PLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEP 150 (429)
Q Consensus 116 -P~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P 150 (429)
|....+++.+|.+|..+|++++|+..|++++.+.+
T Consensus 260 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 260 LPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999843
No 154
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.98 E-value=1.3e-09 Score=89.21 Aligned_cols=92 Identities=22% Similarity=0.353 Sum_probs=86.3
Q ss_pred cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 014213 81 DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAE 160 (429)
Q Consensus 81 ~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La 160 (429)
.....+.++|.+++.. |+|++|+..+++++.++|.+..+++.+|.+|..+|++++|+..|++++.++|++..++..++
T Consensus 14 ~~~~~~~~~~~~~~~~--~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 14 DLALMVKNKGNECFQK--GDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp CHHHHHHHHHHHHHHT--TCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 3457899999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccc
Q 014213 161 RVKKELEKRGLRVN 174 (429)
Q Consensus 161 ~l~~~l~e~~~a~~ 174 (429)
.++..+++...+..
T Consensus 92 ~~~~~~~~~~~A~~ 105 (133)
T 2lni_A 92 AALEAMKDYTKAMD 105 (133)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHHhhHHHHHH
Confidence 99999887766665
No 155
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.97 E-value=2.3e-09 Score=94.61 Aligned_cols=129 Identities=9% Similarity=-0.097 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCC--ccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh---CCC-
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNH--IDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV---TPL- 117 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~--~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel---dP~- 117 (429)
.+..+...|..++..|+|++|+..|.+++.+..... ...+.++.++|.+|+.+ |+|++|+..+.+++++ .++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~--g~~~~A~~~~~~al~~~~~~~~~ 102 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMA--GNWDAARRCFLEERELLASLPED 102 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHcCcc
Confidence 466788999999999999999999999999765432 24567899999999999 9999999999999998 443
Q ss_pred ---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCH----HHHHHHHHHHHHHHhhccccc
Q 014213 118 ---YSKALLKRARCYEALNRLDLAFRDVTTVLNKEP--KNI----MAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 118 ---~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P--~n~----~a~~~La~l~~~l~e~~~a~~ 174 (429)
...+++++|.+|..+|++++|+..+++++.+.+ ++. .++..++.++..+++...+..
T Consensus 103 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 168 (203)
T 3gw4_A 103 PLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQ 168 (203)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 356799999999999999999999999997733 232 235677777777776655544
No 156
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.96 E-value=4.4e-09 Score=83.36 Aligned_cols=92 Identities=14% Similarity=0.142 Sum_probs=83.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHH-HHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 014213 48 LKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSY-LRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRA 126 (429)
Q Consensus 48 lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~-l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA 126 (429)
..+.|..++..|+|++|+..|+++++++|.+. . ++.++|.+|+.+ |+|++|+..|+++++++|++..++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~~~~~~lg~~~~~~--~~~~~A~~~~~~al~~~p~~~~~~~~-- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGK----DEAYYLMGNAYRKL--GDWQKALNNYQSAIELNPDSPALQAR-- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTH----HHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHCTTSTHHHHH--
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcH----HHHHHHHHHHHHHc--CCHHHHHHHHHHHHhcCCCcHHHHHH--
Confidence 46789999999999999999999999999876 6 899999999999 99999999999999999999998855
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 014213 127 RCYEALNRLDLAFRDVTTVLNKEPKNI 153 (429)
Q Consensus 127 ~ay~~LG~~deAl~~~~kAL~l~P~n~ 153 (429)
+.+.+|+..|++++.++|++.
T Consensus 75 ------~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 75 ------KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp ------HHHHHHHHHHCCTTHHHHCCS
T ss_pred ------HHHHHHHHHHHHHhccCcccc
Confidence 677888999999888888764
No 157
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.96 E-value=5.3e-09 Score=103.23 Aligned_cols=107 Identities=19% Similarity=0.092 Sum_probs=96.0
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--CccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-----hC
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRN--HIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALE-----VT 115 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~--~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALe-----ld 115 (429)
..+..+...|..++..|+|++|+..|.+|+++.+.. ....+.++.|+|.+|..+ |+|++|+..+++|+. .+
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~--~~~~~A~~~~~~al~~~~~~~~ 257 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRS--GDDQMAVEHFQKAAKVSREKVP 257 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHCG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHhhCC
Confidence 456778899999999999999999999999986532 224567899999999999 999999999999999 78
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 014213 116 PLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPK 151 (429)
Q Consensus 116 P~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~ 151 (429)
|....+++.+|.+|..+|++++|+..+++++.+.+.
T Consensus 258 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 258 DLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999553
No 158
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.96 E-value=1.7e-10 Score=103.64 Aligned_cols=121 Identities=14% Similarity=0.051 Sum_probs=95.9
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCH---------------
Q 014213 55 LFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYS--------------- 119 (429)
Q Consensus 55 lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~--------------- 119 (429)
....++|+.|.+.|+......+. .+..+.++|.+++.. |+|++|+..|.+++.+.|.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~~~--~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~ 87 (198)
T 2fbn_A 14 RENLYFQGAKKSIYDYTDEEKVQ----SAFDIKEEGNEFFKK--NEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIE 87 (198)
T ss_dssp --------CCCSGGGCCHHHHHH----HHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHH
T ss_pred hhhhhhccccCchhhCCHHHHHH----HHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHH
Confidence 33456666666666544443333 245889999999999 999999999999999999887
Q ss_pred -HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccccc--cccCC
Q 014213 120 -KALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVNDT--VIELP 181 (429)
Q Consensus 120 -kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~e~--~~~L~ 181 (429)
.+|+++|.+|..+|+|++|+.+|++++.++|++..++..++.++..+++...+.... +..+.
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 152 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLN 152 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC
Confidence 899999999999999999999999999999999999999999999999877777633 44444
No 159
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.95 E-value=3.3e-09 Score=101.34 Aligned_cols=103 Identities=16% Similarity=0.062 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCC----
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKAL---KLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPL---- 117 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kAL---el~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~---- 117 (429)
+..+...|..|+..|+|++|+.+|++|+ +..|.+......+++|+|.+|..+ |+|++|+..+++|+.+.+.
T Consensus 155 ~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~--~~y~~Al~~~~kal~~~~~~~~~ 232 (293)
T 2qfc_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLD--SRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHH--hhHHHHHHHHHHHHHHHHhcCcH
Confidence 5678999999999999999999999999 445544322336899999999999 9999999999999988643
Q ss_pred --CHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHhC
Q 014213 118 --YSKALLKRARCYEALNRLDLA-FRDVTTVLNKE 149 (429)
Q Consensus 118 --~~kAl~~rA~ay~~LG~~deA-l~~~~kAL~l~ 149 (429)
...+|+++|.+|..+|++++| ..+|++|+.+.
T Consensus 233 ~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp SSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 278999999999999999999 78899999763
No 160
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.95 E-value=2e-09 Score=103.80 Aligned_cols=114 Identities=15% Similarity=0.083 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHH-------HcCCH-------HHHHHHHHHHHH-hCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 014213 44 MSQELKEEGNKLF-------QKRDH-------GGALLKYEKALK-LLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHEC 108 (429)
Q Consensus 44 ~A~~lk~~Gn~lf-------~~gdy-------eeAl~~Y~kALe-l~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~ 108 (429)
.+..|...|..+. ..|++ ++|+..|++||+ +.|.+.. +|.++|.++..+ |++++|+..|
T Consensus 49 ~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~----~~~~~~~~~~~~--~~~~~A~~~~ 122 (308)
T 2ond_A 49 HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNML----LYFAYADYEESR--MKYEKVHSIY 122 (308)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHH----HHHHHHHHHHHT--TCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHH----HHHHHHHHHHhc--CCHHHHHHHH
Confidence 3445667777766 35885 999999999999 7998874 999999999999 9999999999
Q ss_pred HHHHHhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 014213 109 NLALEVTPLYSK-ALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVK 163 (429)
Q Consensus 109 ~~ALeldP~~~k-Al~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~ 163 (429)
+++++++|.+.. +|+.+|.++...|++++|+..|++|+.+.|.+..++...+.+.
T Consensus 123 ~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~ 178 (308)
T 2ond_A 123 NRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME 178 (308)
T ss_dssp HHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHH
T ss_pred HHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 999999999887 9999999999999999999999999999999887776555543
No 161
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.93 E-value=9e-09 Score=101.74 Aligned_cols=123 Identities=12% Similarity=0.005 Sum_probs=111.2
Q ss_pred HHHHHHHHHH----HHc---CCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHH--HHHHHHHHHHHhCC
Q 014213 46 QELKEEGNKL----FQK---RDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYP--RAIHECNLALEVTP 116 (429)
Q Consensus 46 ~~lk~~Gn~l----f~~---gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~--eAi~~~~~ALeldP 116 (429)
..|..++..+ ... +++++++..++++|+.+|.+.. +|++|+.++.++ +.++ +++..++++|+.+|
T Consensus 104 ~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~----aW~~R~~vl~~l--~~~~~~~EL~~~~~~i~~d~ 177 (306)
T 3dra_A 104 QIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHH----VWSYRKWLVDTF--DLHNDAKELSFVDKVIDTDL 177 (306)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCTTCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHh--cccChHHHHHHHHHHHHhCC
Confidence 3466777777 555 8999999999999999999984 999999999999 8888 99999999999999
Q ss_pred CCHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 117 LYSKALLKRARCYEALNR------LDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 117 ~~~kAl~~rA~ay~~LG~------~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
.+..||..|+.++..+++ ++++++++++++.++|+|.+++..+..+...++....++.
T Consensus 178 ~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~~~~~ 241 (306)
T 3dra_A 178 KNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLE 241 (306)
T ss_dssp TCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCGGGGH
T ss_pred CCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCChHHHH
Confidence 999999999999999998 9999999999999999999999999999988876444443
No 162
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.93 E-value=2.6e-09 Score=103.23 Aligned_cols=127 Identities=12% Similarity=-0.002 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc--cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCC-----
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI--DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPL----- 117 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~--~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~----- 117 (429)
+..+...|+.|...|+|++|+..|.+|+++.+.... ..+.+|.++|.+|..+ |+|++|+..|++|+++.+.
T Consensus 36 ~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~--g~~~~A~~~~~~Al~l~~~~g~~~ 113 (307)
T 2ifu_A 36 ASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDL--QRMPEAVQYIEKASVMYVENGTPD 113 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCGGGGHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHcCCHH
Confidence 345666688999999999999999999999875432 3467899999999999 9999999999999998542
Q ss_pred -CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHhhccccc
Q 014213 118 -YSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKN------IMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 118 -~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n------~~a~~~La~l~~~l~e~~~a~~ 174 (429)
...+|.++|.+|.. |++++|+.+|++|+.+.|.. ..++..++.++..+++...++.
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 176 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAA 176 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 25689999999999 99999999999999997754 5678888899888887777766
No 163
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.93 E-value=4.9e-09 Score=84.80 Aligned_cols=90 Identities=19% Similarity=0.167 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 014213 83 SYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERV 162 (429)
Q Consensus 83 a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l 162 (429)
+.++..+|.+++.. |+|++|+..+++++..+|.+..+++.+|.+|..+|++++|+..|++++.++|++..++..++.+
T Consensus 12 ~~~~~~~~~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 89 (131)
T 2vyi_A 12 AERLKTEGNEQMKV--ENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLA 89 (131)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHc--cCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHH
Confidence 46889999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccccc
Q 014213 163 KKELEKRGLRVN 174 (429)
Q Consensus 163 ~~~l~e~~~a~~ 174 (429)
+..+++...+..
T Consensus 90 ~~~~~~~~~A~~ 101 (131)
T 2vyi_A 90 LSSLNKHVEAVA 101 (131)
T ss_dssp HHHTTCHHHHHH
T ss_pred HHHhCCHHHHHH
Confidence 999887776666
No 164
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.93 E-value=7.1e-09 Score=86.47 Aligned_cols=105 Identities=18% Similarity=0.138 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCC--ccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCC------
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNH--IDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTP------ 116 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~--~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP------ 116 (429)
+..+...|..++..|+|++|+..|.+++.+.+... ...+.++.++|.+|+.+ |+|++|+..+++++.+.+
T Consensus 49 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~~ 126 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL--QDYEKAIDYHLKHLAIAQELKDRI 126 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHccchH
Confidence 45688899999999999999999999999876532 23467899999999999 999999999999998743
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 014213 117 LYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPK 151 (429)
Q Consensus 117 ~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~ 151 (429)
....+++.+|.+|..+|++++|+..+++++.+...
T Consensus 127 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 127 GEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 23568999999999999999999999999987543
No 165
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.91 E-value=3.8e-09 Score=98.59 Aligned_cols=128 Identities=13% Similarity=0.089 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc--cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC----
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI--DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY---- 118 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~--~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~---- 118 (429)
+..+...|..++..|++++|+..|++++.+.+.... ..+.++.++|.+|..+ |++++|+..+++++.+.+..
T Consensus 183 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~ 260 (338)
T 3ro2_A 183 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFL--GEFETASEYYKKTLLLARQLKDRA 260 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhhcchh
Confidence 345778899999999999999999999998775332 3456899999999999 99999999999999987765
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHhhccccc
Q 014213 119 --SKALLKRARCYEALNRLDLAFRDVTTVLNKEPKN------IMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 119 --~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n------~~a~~~La~l~~~l~e~~~a~~ 174 (429)
..+++.+|.+|..+|++++|+..|++++.+.|.. ..++..++.++..+++...+..
T Consensus 261 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 324 (338)
T 3ro2_A 261 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMH 324 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHH
Confidence 7789999999999999999999999999986533 4577888888888887666655
No 166
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.91 E-value=1e-08 Score=107.55 Aligned_cols=127 Identities=12% Similarity=0.082 Sum_probs=105.4
Q ss_pred HHHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----CCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh-
Q 014213 40 VFIGMSQELKEEGNKLFQKRDHGGALLKYEKALKLLP----RNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV- 114 (429)
Q Consensus 40 ~~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P----~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel- 114 (429)
..+..+..+.+++..+..+|+|++|+..|.++|++.. .++++.+..+.|+|.+|..+ |+|++|+..++++|++
T Consensus 304 ~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~--g~~~eA~~~~~~aL~i~ 381 (490)
T 3n71_A 304 EMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYL--QAYEEASHYARRMVDGY 381 (490)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHH
Confidence 3457778888899999999999999999999998753 35557889999999999999 9999999999999976
Q ss_pred ----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHH---HHHHHHHHHHh
Q 014213 115 ----TPLY---SKALLKRARCYEALNRLDLAFRDVTTVLNK-----EPKNIMAAE---IAERVKKELEK 168 (429)
Q Consensus 115 ----dP~~---~kAl~~rA~ay~~LG~~deAl~~~~kAL~l-----~P~n~~a~~---~La~l~~~l~e 168 (429)
.|++ ...|+++|.+|..+|+|++|+..|++|+.+ -|+++.... .+..++..++.
T Consensus 382 ~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~ 450 (490)
T 3n71_A 382 MKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRM 450 (490)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHH
Confidence 3555 457999999999999999999999999975 677776555 44455544443
No 167
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.90 E-value=9.1e-09 Score=101.69 Aligned_cols=117 Identities=12% Similarity=-0.108 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHH----HHcCC-CCHHHHHHHHHHHHHhCCCCH
Q 014213 47 ELKEEGNKLFQKR--DHGGALLKYEKALKLLPRNHIDVSYLRSNMAACY----MQMGL-SEYPRAIHECNLALEVTPLYS 119 (429)
Q Consensus 47 ~lk~~Gn~lf~~g--dyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y----~kl~~-g~y~eAi~~~~~ALeldP~~~ 119 (429)
.|..+|..+...+ ++++|+..++.+|..+|.+.. +|+.|+.++ ..++. +++++++..|+++|+.+|++.
T Consensus 69 aWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~----aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny 144 (306)
T 3dra_A 69 IWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQ----IWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNH 144 (306)
T ss_dssp HHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCH----HHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHH----HHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCH
Confidence 3556677777766 777777777777777777763 777777776 43311 467777777777777777777
Q ss_pred HHHHHHHHHHHHcCCHH--HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 014213 120 KALLKRARCYEALNRLD--LAFRDVTTVLNKEPKNIMAAEIAERVKKELE 167 (429)
Q Consensus 120 kAl~~rA~ay~~LG~~d--eAl~~~~kAL~l~P~n~~a~~~La~l~~~l~ 167 (429)
.+|+.|+.++..+|.++ +++.++++++.++|.|-.++.....+...++
T Consensus 145 ~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~ 194 (306)
T 3dra_A 145 HVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKK 194 (306)
T ss_dssp HHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSG
T ss_pred HHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcc
Confidence 77777777777777776 7777777777777777777777776666554
No 168
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.90 E-value=3.4e-09 Score=88.49 Aligned_cols=91 Identities=16% Similarity=0.139 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 83 SYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY---SKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIA 159 (429)
Q Consensus 83 a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~---~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~L 159 (429)
+..+..+|.+++.. |+|++|+..++++++++|++ ..+++.+|.+|..+|++++|+..|++++.++|++..++..+
T Consensus 28 ~~~~~~~a~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 105 (148)
T 2dba_A 28 VEQLRKEGNELFKC--GDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRR 105 (148)
T ss_dssp HHHHHHHHHHHHTT--TCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHH
Confidence 35889999999999 99999999999999999998 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccccc
Q 014213 160 ERVKKELEKRGLRVND 175 (429)
Q Consensus 160 a~l~~~l~e~~~a~~e 175 (429)
+.++..+++...+...
T Consensus 106 a~~~~~~~~~~~A~~~ 121 (148)
T 2dba_A 106 SQALEKLGRLDQAVLD 121 (148)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHH
Confidence 9999999887777663
No 169
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.90 E-value=2.2e-09 Score=105.45 Aligned_cols=128 Identities=11% Similarity=0.093 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc--cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC----
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI--DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY---- 118 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~--~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~---- 118 (429)
+..+...|..++..|+|++|+..|.+++++.+.... ..+.++.++|.+|+.+ |+|++|+..+++++.+.+..
T Consensus 223 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~ 300 (411)
T 4a1s_A 223 GRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFL--GQFEDAAEHYKRTLALAVELGERE 300 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHC--cCHHHHHHHHHHHHHHHHHcCCHH
Confidence 446778999999999999999999999999875432 3456889999999999 99999999999999998754
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHhhccccc
Q 014213 119 --SKALLKRARCYEALNRLDLAFRDVTTVLNKEPKN------IMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 119 --~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n------~~a~~~La~l~~~l~e~~~a~~ 174 (429)
..+++.+|.+|..+|++++|+.+|++++.+.+.. ..++..++.++..+++...+..
T Consensus 301 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 364 (411)
T 4a1s_A 301 VEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERALK 364 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 7789999999999999999999999999985532 4578888888888887666655
No 170
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.89 E-value=9.9e-09 Score=84.38 Aligned_cols=89 Identities=17% Similarity=0.044 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHH
Q 014213 85 LRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYS---KALLKRARCYEALNRLDLAFRDVTTVLNKEPKN---IMAAEI 158 (429)
Q Consensus 85 l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~---kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n---~~a~~~ 158 (429)
.++++|.+++.. |+|++|+..+++++..+|++. .+++.+|.+|..+|++++|+..|++++.+.|++ +.++..
T Consensus 4 ~~~~~a~~~~~~--~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (129)
T 2xev_A 4 TAYNVAFDALKN--GKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLK 81 (129)
T ss_dssp CHHHHHHHHHHT--TCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHh--CCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHH
Confidence 567899999999 999999999999999999988 899999999999999999999999999999999 899999
Q ss_pred HHHHHHHHHhhcccccc
Q 014213 159 AERVKKELEKRGLRVND 175 (429)
Q Consensus 159 La~l~~~l~e~~~a~~e 175 (429)
++.++..+++...+...
T Consensus 82 la~~~~~~g~~~~A~~~ 98 (129)
T 2xev_A 82 LGLSQYGEGKNTEAQQT 98 (129)
T ss_dssp HHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHH
Confidence 99999999887777663
No 171
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.89 E-value=1.2e-09 Score=113.61 Aligned_cols=94 Identities=16% Similarity=0.138 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+.+.|..|+..|+|++|+..|++|++++|.+.. +++++|.+|+.+ |+|++|+..+++|++++|++..+++.
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~----~~~~lg~~~~~~--g~~~eA~~~~~~al~~~p~~~~~~~~ 113 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIK----GYYRRAASNMAL--GKFRAALRDYETVVKVKPHDKDAKMK 113 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHH----HHHHHHHHHHHH--TCHHHHHHHHHHHHHHSTTCTTHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 566889999999999999999999999999998874 899999999999 99999999999999999999999999
Q ss_pred HHHH--HHHcCCHHHHHHHHHH
Q 014213 125 RARC--YEALNRLDLAFRDVTT 144 (429)
Q Consensus 125 rA~a--y~~LG~~deAl~~~~k 144 (429)
++.+ +..+|++++|+..+++
T Consensus 114 l~~~~~~~~~g~~~~A~~~~~~ 135 (477)
T 1wao_1 114 YQECNKIVKQKAFERAIAGDEH 135 (477)
T ss_dssp HHHHHHHHHHHHHCCC------
T ss_pred HHHHHHHHHHHHHHHHhccccc
Confidence 9998 8889999999999883
No 172
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.89 E-value=8.7e-09 Score=82.61 Aligned_cols=90 Identities=19% Similarity=0.175 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 014213 83 SYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERV 162 (429)
Q Consensus 83 a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l 162 (429)
+.++.++|.+|... |++++|+..+.+++..+|.+..+++.+|.+|...|++++|+..|++++.+.|.+..++..++.+
T Consensus 9 ~~~~~~~~~~~~~~--~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 86 (125)
T 1na0_A 9 AEAWYNLGNAYYKQ--GDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNA 86 (125)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 35889999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccccc
Q 014213 163 KKELEKRGLRVN 174 (429)
Q Consensus 163 ~~~l~e~~~a~~ 174 (429)
+..+++...+..
T Consensus 87 ~~~~~~~~~A~~ 98 (125)
T 1na0_A 87 YYKQGDYDEAIE 98 (125)
T ss_dssp HHHTTCHHHHHH
T ss_pred HHHhcCHHHHHH
Confidence 988887666655
No 173
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.89 E-value=1.1e-09 Score=108.39 Aligned_cols=102 Identities=7% Similarity=-0.095 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 014213 47 ELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRA 126 (429)
Q Consensus 47 ~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA 126 (429)
.+.+.|..|+..|+|++|+..|++||+++|.+.. +|+++|.+|+.+ |+|++|+.+|+++++++|++..++..++
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~----a~~~lg~a~~~~--g~~~~A~~~l~~al~l~p~~~~a~~~L~ 305 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPK----ALFRRGKAKAEL--GQMDSARDDFRKAQKYAPDDKAIRRELR 305 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHTT--TCHHHHHHHHHHTTC-------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 6788999999999999999999999999998874 999999999999 9999999999999999999999999999
Q ss_pred HHH-HHcCCHHHHHHHHHHHHHhCCCCHH
Q 014213 127 RCY-EALNRLDLAFRDVTTVLNKEPKNIM 154 (429)
Q Consensus 127 ~ay-~~LG~~deAl~~~~kAL~l~P~n~~ 154 (429)
.+. ...+.++.+...|.+++.+.|+++.
T Consensus 306 ~l~~~~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 306 ALAEQEKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp -----------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 984 4566788999999999999998764
No 174
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.88 E-value=1.3e-08 Score=101.79 Aligned_cols=117 Identities=10% Similarity=0.019 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCC--CHHHHHHHHHHH
Q 014213 44 MSQELKEEGNKLFQKRD----------HGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLS--EYPRAIHECNLA 111 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gd----------yeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g--~y~eAi~~~~~A 111 (429)
....|..++..+...+. +++++..++.+|..+|.+.. +|+.|+.++..+ + .|++++..|+++
T Consensus 63 ~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~----aW~hR~wlL~~l--~~~~~~~EL~~~~k~ 136 (331)
T 3dss_A 63 FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYG----TWHHRCWLLSRL--PEPNWARELELCARF 136 (331)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHC--SSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHhcc--CcccHHHHHHHHHHH
Confidence 34457777777766555 78999999999999999985 999999999999 6 599999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 014213 112 LEVTPLYSKALLKRARCYEALNR-LDLAFRDVTTVLNKEPKNIMAAEIAERVKKEL 166 (429)
Q Consensus 112 LeldP~~~kAl~~rA~ay~~LG~-~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l 166 (429)
++++|.+..||..|+.++..+|. +++++.++.+++..+|.|..+|..+..+...+
T Consensus 137 l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 137 LEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999 69999999999999999999999999998887
No 175
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.87 E-value=3.7e-08 Score=92.00 Aligned_cols=109 Identities=14% Similarity=0.093 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHH----cCCCCHHHHHHHHHHHHHhCC
Q 014213 45 SQELKEEGNKLFQ----KRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQ----MGLSEYPRAIHECNLALEVTP 116 (429)
Q Consensus 45 A~~lk~~Gn~lf~----~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~k----l~~g~y~eAi~~~~~ALeldP 116 (429)
+..+...|..++. .+++++|+..|++|+++. +. .+++++|.+|.. . +++++|+..++++++.+
T Consensus 38 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~----~a~~~lg~~~~~g~~~~--~~~~~A~~~~~~a~~~~- 108 (273)
T 1ouv_A 38 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YS----NGCHLLGNLYYSGQGVS--QNTNKALQYYSKACDLK- 108 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CH----HHHHHHHHHHHHTSSSC--CCHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CH----HHHHHHHHHHhCCCCcc--cCHHHHHHHHHHHHHcC-
Confidence 3456778888888 888888888888888874 33 477788888888 7 88888888888888774
Q ss_pred CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 014213 117 LYSKALLKRARCYEA----LNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKE 165 (429)
Q Consensus 117 ~~~kAl~~rA~ay~~----LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~ 165 (429)
++.+++.+|.+|.. .+++++|+.+|++++.+. +..++..++.++..
T Consensus 109 -~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 158 (273)
T 1ouv_A 109 -YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDA 158 (273)
T ss_dssp -CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred -CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHc
Confidence 77888888888888 888888888888888865 56777777777765
No 176
>1oey_J P40-PHOX, neutrophil cytosol factor 4; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=98.85 E-value=6.8e-09 Score=85.37 Aligned_cols=70 Identities=24% Similarity=0.337 Sum_probs=57.6
Q ss_pred CCceEEEEccCC----ccHHHHHHHHHhhCCCCCceEEEEECCCCCEEEecChHHHHHHHHhhccCC------cEEEEEE
Q 014213 269 GEDIRVAQLPLN----SSLLQLREVISDRFPSCRAVLIKYRDEEGDLVTITTDEELRWAEASAEMQG------SVRLFVV 338 (429)
Q Consensus 269 ~~DiR~~~i~~~----~~~~~L~~~v~~kf~~~~~~~iky~DedgDliti~~~~dl~~a~~~~~~~~------~~rl~v~ 338 (429)
+-+||-|.|..+ .+|.+|+..+|+.|+ ...+.|+|+|.|||||+|-|++|+.+++..++..+ +.+|+|+
T Consensus 17 ~~~irdI~veedl~~~P~ykdLl~lmr~~F~-~~DIaLNYrD~eGDLIrilddeDv~lmi~~sr~~~s~k~~FPWeLhvT 95 (107)
T 1oey_J 17 ISTIKDIAVEEDLSSTPLLKDLLELTRREFQ-REDIALNYRDAEGDLVRLLSDEDVALMVRQARGLPSQKRLFPWKLHIT 95 (107)
T ss_dssp EEEEEEEEECSCTTCCCCHHHHHHHHHHHHC-CSSEEEEEECTTSCEEECCSHHHHHHHHHHCCCCCCTTCBCSSCEEEE
T ss_pred CceeeeEEEccccccCCCHHHHHHHHHHHhc-ccceeeeeecCCCCEEEEcchHHHHHHHHHhhcCcccccccceeEEEe
Confidence 345666665444 599999999999997 67899999999999999999999999999885433 3778887
Q ss_pred e
Q 014213 339 G 339 (429)
Q Consensus 339 e 339 (429)
.
T Consensus 96 ~ 96 (107)
T 1oey_J 96 Q 96 (107)
T ss_dssp E
T ss_pred e
Confidence 5
No 177
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.84 E-value=2.4e-08 Score=89.19 Aligned_cols=104 Identities=17% Similarity=0.130 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHcCCH
Q 014213 61 HGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLS---EYPRAIHECNLALEVT-P-LYSKALLKRARCYEALNRL 135 (429)
Q Consensus 61 yeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g---~y~eAi~~~~~ALeld-P-~~~kAl~~rA~ay~~LG~~ 135 (429)
...+...|.+++...+.+. .+.++.|.|+.+. . ++.++|..++.+++.+ | +...++|++|.+|+.+|+|
T Consensus 14 l~~~~~~y~~e~~~~~~~~----~~~F~ya~~Lv~S--~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y 87 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSVSK----STQFEYAWCLVRS--KYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEY 87 (152)
T ss_dssp HHHHHHHHHHHHHTTCCCH----HHHHHHHHHHHTC--SSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHHHHHHHHHccCCCcH----HHHHHHHHHHHcC--CCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCH
Confidence 4567788888888777655 4889999999998 6 7789999999999999 7 6789999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhc
Q 014213 136 DLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRG 170 (429)
Q Consensus 136 deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~ 170 (429)
++|+++++++|+++|+|..+......+...+.+.+
T Consensus 88 ~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~~kdg 122 (152)
T 1pc2_A 88 EKALKYVRGLLQTEPQNNQAKELERLIDKAMKKDG 122 (152)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999998886644
No 178
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.83 E-value=2.5e-08 Score=88.03 Aligned_cols=126 Identities=10% Similarity=-0.004 Sum_probs=105.7
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHH-HHcCCCCHHHHHHHHHHHHHhCCCCHHH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACY-MQMGLSEYPRAIHECNLALEVTPLYSKA 121 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y-~kl~~g~y~eAi~~~~~ALeldP~~~kA 121 (429)
..+..+...|..++..|++++|+..|++++...| ++. ++..++.+. ... +...+|+..++++++++|++..+
T Consensus 38 ~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~----~~~~~~~~~~~~~--~~~~~a~~~~~~al~~~P~~~~~ 110 (176)
T 2r5s_A 38 SRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNS----YKSLIAKLELHQQ--AAESPELKRLEQELAANPDNFEL 110 (176)
T ss_dssp TSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHH----HHHHHHHHHHHHH--HTSCHHHHHHHHHHHHSTTCHHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChH----HHHHHHHHHHHhh--cccchHHHHHHHHHHhCCCCHHH
Confidence 3456788999999999999999999999999999 653 444444332 232 34456899999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHHHhhcccccc
Q 014213 122 LLKRARCYEALNRLDLAFRDVTTVLNKEPKN--IMAAEIAERVKKELEKRGLRVND 175 (429)
Q Consensus 122 l~~rA~ay~~LG~~deAl~~~~kAL~l~P~n--~~a~~~La~l~~~l~e~~~a~~e 175 (429)
++.+|.+|..+|++++|+..|++++.++|+. ..++..++.++..+++...+...
T Consensus 111 ~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~ 166 (176)
T 2r5s_A 111 ACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASK 166 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHH
Confidence 9999999999999999999999999999975 66999999999999877666553
No 179
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.83 E-value=4.8e-08 Score=100.97 Aligned_cols=122 Identities=11% Similarity=0.111 Sum_probs=101.5
Q ss_pred HHHHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----CCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh
Q 014213 39 EVFIGMSQELKEEGNKLFQKRDHGGALLKYEKALKLL----PRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV 114 (429)
Q Consensus 39 ~~~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~----P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel 114 (429)
...+..+....+.+......|+|++|+..|+++|++. ..++++.+..+.|+|.+|..+ |+|++|+..|+++|++
T Consensus 292 ~~~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~--g~~~eA~~~~~~aL~i 369 (433)
T 3qww_A 292 RDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYM--QDWEGALKYGQKIIKP 369 (433)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhh--cCHHHHHHHHHHHHHH
Confidence 3345666777777777778899999999999999864 335557888999999999999 9999999999999976
Q ss_pred -----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHH
Q 014213 115 -----TPLY---SKALLKRARCYEALNRLDLAFRDVTTVLNK-----EPKNIMAAEIAERV 162 (429)
Q Consensus 115 -----dP~~---~kAl~~rA~ay~~LG~~deAl~~~~kAL~l-----~P~n~~a~~~La~l 162 (429)
-|++ ...|+++|.+|..+|+|++|+..|++|+.+ -|+++.+......+
T Consensus 370 ~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l 430 (433)
T 3qww_A 370 YSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEI 430 (433)
T ss_dssp HHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 3444 557999999999999999999999999986 68888877655543
No 180
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.83 E-value=2.3e-08 Score=82.47 Aligned_cols=76 Identities=12% Similarity=0.080 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALL 123 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~ 123 (429)
.+..+...|..++..|+|++|+..|+++++++|.++. ++.++|.||+.+ |++++|+..+++++.+.|+++....
T Consensus 26 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~----~~~~l~~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~~ 99 (117)
T 3k9i_A 26 LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQA----LRVFYAMVLYNL--GRYEQGVELLLKIIAETSDDETIQS 99 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHH--TCHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 4567899999999999999999999999999999875 999999999999 9999999999999999999987654
Q ss_pred HH
Q 014213 124 KR 125 (429)
Q Consensus 124 ~r 125 (429)
..
T Consensus 100 ~~ 101 (117)
T 3k9i_A 100 YK 101 (117)
T ss_dssp TH
T ss_pred HH
Confidence 33
No 181
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.81 E-value=1.5e-08 Score=97.19 Aligned_cols=96 Identities=18% Similarity=0.217 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 014213 84 YLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVK 163 (429)
Q Consensus 84 ~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~ 163 (429)
..+.++|.+|+.. |+|++|+..|++|+.++|++..+|+++|.+|..+|++++|+.+|++++.++|++..++..++.++
T Consensus 5 ~~~~~~g~~~~~~--g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 5 QELKEQGNRLFVG--RKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp HHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc--CCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 5789999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccc--cccccCC
Q 014213 164 KELEKRGLRVN--DTVIELP 181 (429)
Q Consensus 164 ~~l~e~~~a~~--e~~~~L~ 181 (429)
..+++...|.. .++..+.
T Consensus 83 ~~~g~~~~A~~~~~~al~l~ 102 (281)
T 2c2l_A 83 LEMESYDEAIANLQRAYSLA 102 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhC
Confidence 99988777766 3344444
No 182
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.80 E-value=2.1e-08 Score=81.22 Aligned_cols=92 Identities=11% Similarity=0.031 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHH
Q 014213 83 SYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKN-------IMA 155 (429)
Q Consensus 83 a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n-------~~a 155 (429)
+..+.++|.+|+.. |+|++|+..+.+++.++|.+..+++.+|.+|..+|++++|+..|++++.+.|++ ..+
T Consensus 4 ~~~~~~l~~~~~~~--~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 4 ALKEKELGNDAYKK--KDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHh--cCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 45788999999999 999999999999999999999999999999999999999999999999999877 889
Q ss_pred HHHHHHHHHHHHhhccccccc
Q 014213 156 AEIAERVKKELEKRGLRVNDT 176 (429)
Q Consensus 156 ~~~La~l~~~l~e~~~a~~e~ 176 (429)
+..++.++..+++...+....
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~ 102 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFY 102 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHH
Confidence 999999998888777666633
No 183
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.79 E-value=7.8e-08 Score=96.13 Aligned_cols=117 Identities=11% Similarity=-0.076 Sum_probs=105.1
Q ss_pred hHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCC-HHHHHHHHHHHHHhCCCCH
Q 014213 43 GMSQELKEEGNKLFQKR--DHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSE-YPRAIHECNLALEVTPLYS 119 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~g--dyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~-y~eAi~~~~~ALeldP~~~ 119 (429)
+....|..++..+...+ ++++++.+|+++|+.+|.|. .+|++++.+...+ +. +++++..++++|+.+|.+.
T Consensus 106 Kny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy----~AW~~R~~vl~~l--~~~~~eel~~~~~~I~~~p~N~ 179 (331)
T 3dss_A 106 KSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNF----HCWDYRRFVAAQA--AVAPAEELAFTDSLITRNFSNY 179 (331)
T ss_dssp TCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHCSCCH
T ss_pred CCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHh--CcCHHHHHHHHHHHHHHCCCCH
Confidence 34456778888888888 49999999999999999998 4999999999999 88 6999999999999999999
Q ss_pred HHHHHHHHHHHHc--------------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 014213 120 KALLKRARCYEAL--------------NRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKE 165 (429)
Q Consensus 120 kAl~~rA~ay~~L--------------G~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~ 165 (429)
.||+.|+.++..+ +.++++++++.+++.++|+|.++|..+..+...
T Consensus 180 SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~ 239 (331)
T 3dss_A 180 SSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGA 239 (331)
T ss_dssp HHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 9999999999988 569999999999999999999999877666543
No 184
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.78 E-value=4.6e-08 Score=86.15 Aligned_cols=105 Identities=13% Similarity=0.017 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCC--CC
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKL---LPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTP--LY 118 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel---~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP--~~ 118 (429)
.+..+...|..++..|+|++|+..|.+++.+ .+.++...+.++.++|.+|..+ |++++|+..+++++.+.+ .+
T Consensus 65 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~--g~~~~A~~~~~~al~~~~~~~~ 142 (203)
T 3gw4_A 65 EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHF--GDLAGARQEYEKSLVYAQQADD 142 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHhccc
Confidence 4567889999999999999999999999999 4433324567899999999999 999999999999997642 22
Q ss_pred ----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 014213 119 ----SKALLKRARCYEALNRLDLAFRDVTTVLNKEP 150 (429)
Q Consensus 119 ----~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P 150 (429)
..++..+|.+|..+|++++|+..+++++.+..
T Consensus 143 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 143 QVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 34578999999999999999999999998843
No 185
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.77 E-value=1.1e-07 Score=98.10 Aligned_cols=120 Identities=8% Similarity=0.019 Sum_probs=99.8
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----CCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC---
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLL----PRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVT--- 115 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~----P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld--- 115 (429)
..+..+...-..+...|+|++|+..|+++|++. +.+++..+..+.|+|.+|..+ |+|++|+..|.++|.+-
T Consensus 285 ~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~--g~~~eA~~~~~~~L~i~~~~ 362 (429)
T 3qwp_A 285 KEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINL--GLLEEALFYGTRTMEPYRIF 362 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhHHHH
Confidence 445667777788889999999999999999763 445557888999999999999 99999999999999762
Q ss_pred --CCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHH
Q 014213 116 --PLY---SKALLKRARCYEALNRLDLAFRDVTTVLNK-----EPKNIMAAEIAERVKK 164 (429)
Q Consensus 116 --P~~---~kAl~~rA~ay~~LG~~deAl~~~~kAL~l-----~P~n~~a~~~La~l~~ 164 (429)
|++ ...|+++|.+|..+|++++|+..|++|+.+ -|+++.....+..+..
T Consensus 363 lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~ 421 (429)
T 3qwp_A 363 FPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEE 421 (429)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Confidence 444 457999999999999999999999999986 6888877666544433
No 186
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.77 E-value=3e-08 Score=99.65 Aligned_cols=92 Identities=16% Similarity=0.130 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALL 123 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~ 123 (429)
.+..+.+.|..|++.|+|++|+..|++||+++|.+.. +|+++|.+|+.+ ++|++|+.++++|++++|++..++.
T Consensus 272 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~----a~~~lg~~~~~~--g~~~eA~~~l~~Al~l~P~~~~~~~ 345 (370)
T 1ihg_A 272 ALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTK----ALYRRAQGWQGL--KEYDQALADLKKAQEIAPEDKAIQA 345 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHH----HHHHHHHHHHHc--cCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 3456788999999999999999999999999998874 999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHH
Q 014213 124 KRARCYEALNRLDLAFRD 141 (429)
Q Consensus 124 ~rA~ay~~LG~~deAl~~ 141 (429)
.++.++..++++++|...
T Consensus 346 ~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 346 ELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999888654
No 187
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.76 E-value=6.7e-08 Score=97.34 Aligned_cols=111 Identities=10% Similarity=0.002 Sum_probs=102.0
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 014213 54 KLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLS-EYPRAIHECNLALEVTPLYSKALLKRARCYEAL 132 (429)
Q Consensus 54 ~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g-~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~L 132 (429)
.+...+..++|+.+++++|.++|.+. ++|+.|+.++..+ + .+++++..++.+|..+|++..+|+.|+.++..+
T Consensus 63 ~~~~~e~se~AL~lt~~~L~~nP~~y----taWn~R~~iL~~l--~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l 136 (349)
T 3q7a_A 63 IAAKEEKSERALELTEIIVRMNPAHY----TVWQYRFSLLTSL--NKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRI 136 (349)
T ss_dssp HHHTTCCSHHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHT--TCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHhCchhH----HHHHHHHHHHHHh--hhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 34444556899999999999999998 4999999999999 8 599999999999999999999999999999999
Q ss_pred -C-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhc
Q 014213 133 -N-RLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRG 170 (429)
Q Consensus 133 -G-~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~ 170 (429)
+ ++++++..+++++.++|.|..++.....+...++...
T Consensus 137 ~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 137 SPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp CCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTT
T ss_pred cCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccc
Confidence 8 9999999999999999999999999999999888655
No 188
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.76 E-value=5e-08 Score=95.51 Aligned_cols=108 Identities=7% Similarity=-0.120 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC--CC-CHHHHH
Q 014213 47 ELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVT--PL-YSKALL 123 (429)
Q Consensus 47 ~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld--P~-~~kAl~ 123 (429)
..+..|..+++.++|++|+..|+.++...+.. ....+++++|.++..+ |++++|+..|++++... |. ...+++
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~--~~~~a~~~LG~al~~L--G~~~eAl~~l~~a~~g~~~P~~~~da~~ 212 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKF--LAGAAGVAHGVAAANL--ALFTEAERRLTEANDSPAGEACARAIAW 212 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHH--HHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHTSTTTTTTHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcc--cHHHHHHHHHHHHHHC--CCHHHHHHHHHHHhcCCCCccccHHHHH
Confidence 56778889999999999999998776643111 1134788999999999 99999999999998654 65 667999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 124 KRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIA 159 (429)
Q Consensus 124 ~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~L 159 (429)
++|.|+..+|+.++|...|++++..+|+ ..+...|
T Consensus 213 ~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL 247 (282)
T 4f3v_A 213 YLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAAL 247 (282)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHH
Confidence 9999999999999999999999999998 6665554
No 189
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.75 E-value=4.6e-08 Score=79.01 Aligned_cols=82 Identities=13% Similarity=0.073 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCC--CHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPL--YSKAL 122 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~--~~kAl 122 (429)
+..+...|..|+..|+|++|+..|+++++++|.+.. +|.++|.||..+ |++++|+..+++++++.|. +..+.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~----a~~~lg~~~~~~--g~~~~A~~~~~~al~l~~~~~~~~~~ 80 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDYVG----TYYHLGKLYERL--DRTDDAIDTYAQGIEVAREEGTQKDL 80 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHhhhhcCCchhHH
Confidence 456889999999999999999999999999999885 999999999999 9999999999999999764 34444
Q ss_pred HHHHHHHHHc
Q 014213 123 LKRARCYEAL 132 (429)
Q Consensus 123 ~~rA~ay~~L 132 (429)
..+...+...
T Consensus 81 ~~l~~~l~~~ 90 (100)
T 3ma5_A 81 SELQDAKLKA 90 (100)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 4444444443
No 190
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.74 E-value=1.3e-08 Score=91.48 Aligned_cols=71 Identities=18% Similarity=0.229 Sum_probs=63.5
Q ss_pred hHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCC-----------CH
Q 014213 43 GMSQELKEEGNKLFQKRDH----------GGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLS-----------EY 101 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdy----------eeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g-----------~y 101 (429)
..+..|.+.|+.+...+++ ++|+..|++||+++|++.. +|+|+|.+|..+ | +|
T Consensus 34 ~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~----A~~~LG~ay~~l--g~l~P~~~~a~g~~ 107 (158)
T 1zu2_A 34 LDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDE----AVWCIGNAYTSF--AFLTPDETEAKHNF 107 (158)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHH--HHHCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHH----HHHHHHHHHHHh--cccCcchhhhhccH
Confidence 3456688899999998875 5999999999999999885 999999999987 5 89
Q ss_pred HHHHHHHHHHHHhCCCCH
Q 014213 102 PRAIHECNLALEVTPLYS 119 (429)
Q Consensus 102 ~eAi~~~~~ALeldP~~~ 119 (429)
++|+..|++||+++|++.
T Consensus 108 ~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 108 DLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCCCH
Confidence 999999999999999974
No 191
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.74 E-value=7.9e-08 Score=93.77 Aligned_cols=129 Identities=11% Similarity=0.011 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc--cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC------
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI--DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVT------ 115 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~--~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld------ 115 (429)
.+..+...|..++..|+|++|+..|.+++.+.|.... ..+.+++++|.+|+.+ |+|++|+..+++++.+.
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~--G~~~~A~~~~~~al~~~~~~~~~ 129 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQ--GFLQTAWETQEKAFQLINEQHLE 129 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHhccc
Confidence 3456778889999999999999999999988775443 2345678899999998 99999999999998875
Q ss_pred --CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHHHhhccccc
Q 014213 116 --PLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKN-----IMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 116 --P~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n-----~~a~~~La~l~~~l~e~~~a~~ 174 (429)
|....++..+|.+|..+|++++|+..+++++.+.|.. ..++..++.++...++...+..
T Consensus 130 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 195 (373)
T 1hz4_A 130 QLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARS 195 (373)
T ss_dssp TSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 3345678889999999999999999999999887752 3567777888877776665554
No 192
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.73 E-value=3.3e-08 Score=94.97 Aligned_cols=82 Identities=12% Similarity=0.029 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCCHHHH
Q 014213 61 HGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY--SKALLKRARCYEALNRLDLA 138 (429)
Q Consensus 61 yeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~--~kAl~~rA~ay~~LG~~deA 138 (429)
+++|+..|++++.++|++.. +++++|.+|+.+ |++++|+..+.++++++|++ ..++.+++.+|..+|+.++|
T Consensus 201 ~~~a~~~l~~al~~~P~~~~----~~~~la~~l~~~--g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a 274 (287)
T 3qou_A 201 DTPEIQQLQQQVAENPEDAA----LATQLALQLHQV--GRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDAL 274 (287)
T ss_dssp SCHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHH
T ss_pred cCccHHHHHHHHhcCCccHH----HHHHHHHHHHHc--ccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcH
Confidence 33345556666777787774 899999999999 99999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHh
Q 014213 139 FRDVTTVLNK 148 (429)
Q Consensus 139 l~~~~kAL~l 148 (429)
+..|+++|..
T Consensus 275 ~~~~r~al~~ 284 (287)
T 3qou_A 275 ASXYRRQLYA 284 (287)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999863
No 193
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.72 E-value=4.3e-08 Score=89.79 Aligned_cols=113 Identities=12% Similarity=0.020 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCC---CHHHHHHHHHHHHHhCCCCH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLS---EYPRAIHECNLALEVTPLYS 119 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g---~y~eAi~~~~~ALeldP~~~ 119 (429)
..+..+...|..|+..+++++|+..|++|++. .++ .+++++|.+|..- | ++++|+..|++|+ ++.++
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~----~a~~~lg~~y~~~--g~~~~~~~A~~~~~~A~--~~g~~ 85 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDG----DALALLAQLKIRN--PQQADYPQARQLAEKAV--EAGSK 85 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCH----HHHHHHHHHTTSS--TTSCCHHHHHHHHHHHH--HTTCH
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCH----HHHHHHHHHHHcC--CCCCCHHHHHHHHHHHH--HCCCH
Confidence 45667889999999999999999999999886 344 4788899998862 2 8999999999995 46789
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHH
Q 014213 120 KALLKRARCYEA----LNRLDLAFRDVTTVLNKEP--KNIMAAEIAERVKKE 165 (429)
Q Consensus 120 kAl~~rA~ay~~----LG~~deAl~~~~kAL~l~P--~n~~a~~~La~l~~~ 165 (429)
.+++++|.+|.. .+++++|+..|++++...| +++.+...++.++..
T Consensus 86 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 86 SGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp HHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 999999999987 8899999999999999887 458888899988876
No 194
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.69 E-value=1.5e-07 Score=77.20 Aligned_cols=80 Identities=20% Similarity=0.166 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---CccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRN---HIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKA 121 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~---~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kA 121 (429)
+..+...|..+|+.++|..|+..|+.|++..+.+ ......++.++|.||.++ |+++.|+..+++|+.++|++..+
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~--g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQ--GDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHc--cCHHHHHHHHHHHHhcCCCCHHH
Confidence 3557778888888888888888888887765322 123455667777777777 77777777777777777777666
Q ss_pred HHHHH
Q 014213 122 LLKRA 126 (429)
Q Consensus 122 l~~rA 126 (429)
+.+++
T Consensus 83 ~~n~~ 87 (104)
T 2v5f_A 83 NGNLK 87 (104)
T ss_dssp HHHHH
T ss_pred HhhHH
Confidence 66655
No 195
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.67 E-value=6.9e-08 Score=97.22 Aligned_cols=121 Identities=8% Similarity=-0.091 Sum_probs=110.4
Q ss_pred hHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCCCCHH
Q 014213 43 GMSQELKEEGNKLFQKR-DHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLS-EYPRAIHECNLALEVTPLYSK 120 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~g-dyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g-~y~eAi~~~~~ALeldP~~~k 120 (429)
+....|..+|..+...+ ++++++..++.+|..+|.+.. +|+.|+.++..+. + ++++++..|+++|+++|++..
T Consensus 86 ~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~----aW~hR~wlL~~l~-~~~~~~EL~~~~k~L~~dpkNy~ 160 (349)
T 3q7a_A 86 AHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQ----VWHHRLLLLDRIS-PQDPVSEIEYIHGSLLPDPKNYH 160 (349)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHH----HHHHHHHHHHHHC-CSCCHHHHHHHHHHTSSCTTCHH
T ss_pred hhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHH----HHHHHHHHHHHhc-CCChHHHHHHHHHHHHhCCCCHH
Confidence 66778999999999999 599999999999999999984 9999999998862 4 789999999999999999999
Q ss_pred HHHHHHHHHHHcCCHH--------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 014213 121 ALLKRARCYEALNRLD--------LAFRDVTTVLNKEPKNIMAAEIAERVKKELEK 168 (429)
Q Consensus 121 Al~~rA~ay~~LG~~d--------eAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e 168 (429)
||+.|+.++..++.++ ++++++++++.++|.|..++.....+...++.
T Consensus 161 AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~ 216 (349)
T 3q7a_A 161 TWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPG 216 (349)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 9999999999999888 99999999999999999999999998877653
No 196
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.65 E-value=9.9e-08 Score=87.37 Aligned_cols=113 Identities=13% Similarity=-0.065 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHH----cCCCCHHHHHHHHHHHHHhC
Q 014213 44 MSQELKEEGNKLFQKR----DHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQ----MGLSEYPRAIHECNLALEVT 115 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~g----dyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~k----l~~g~y~eAi~~~~~ALeld 115 (429)
.+..+...|..|+. + ++++|+..|.+|++. .++ .+++++|.+|+. . +++.+|+..+++|++..
T Consensus 49 ~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~--g~~----~a~~~Lg~~y~~g~g~~--~d~~~A~~~~~~A~~~~ 119 (212)
T 3rjv_A 49 DGDALALLAQLKIR-NPQQADYPQARQLAEKAVEA--GSK----SGEIVLARVLVNRQAGA--TDVAHAITLLQDAARDS 119 (212)
T ss_dssp CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHT--TCH----HHHHHHHHHHTCGGGSS--CCHHHHHHHHHHHTSST
T ss_pred CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHC--CCH----HHHHHHHHHHHcCCCCc--cCHHHHHHHHHHHHHcC
Confidence 45668889999888 7 999999999999764 455 488999999987 6 89999999999999999
Q ss_pred C--CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 014213 116 P--LYSKALLKRARCYEA----LNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKEL 166 (429)
Q Consensus 116 P--~~~kAl~~rA~ay~~----LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l 166 (429)
| .++.+++++|.+|.. .+++++|+.+|++++.+ |+++.+...++.++..-
T Consensus 120 ~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g 175 (212)
T 3rjv_A 120 ESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQG 175 (212)
T ss_dssp TSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHC
T ss_pred CCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcC
Confidence 8 469999999999999 88999999999999999 88888999999887543
No 197
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.63 E-value=1.6e-07 Score=76.62 Aligned_cols=83 Identities=11% Similarity=0.032 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCC--CHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPL--YSKAL 122 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~--~~kAl 122 (429)
+..+...|..++..|+|++|+..|++++.++|.+.. +|.++|.+|..+ |++++|+..|+++++++|. +..++
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~----~~~~la~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~ 92 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSV----AWKWLGKTLQGQ--GDRAGARQAWESGLAAAQSRGDQQVV 92 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHHhccccccHHHH
Confidence 356889999999999999999999999999998874 899999999999 9999999999999999884 44555
Q ss_pred HHHHHHHHHcC
Q 014213 123 LKRARCYEALN 133 (429)
Q Consensus 123 ~~rA~ay~~LG 133 (429)
..+...+..++
T Consensus 93 ~~l~~~l~~l~ 103 (115)
T 2kat_A 93 KELQVFLRRLA 103 (115)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 55555554444
No 198
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.62 E-value=1.6e-07 Score=97.08 Aligned_cols=131 Identities=9% Similarity=-0.090 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
+..+...|..+...|++++|...|++++.+.|.++. .+|.+.+.++.++ |++++|+..|.+|++..|.....++.
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~---~~~~~~~~~~~~~--~~~~~A~~~~~~Al~~~~~~~~~~~~ 395 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPT---LVYIQYMKFARRA--EGIKSGRMIFKKAREDARTRHHVYVT 395 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHH---HHHHHHHHHHHHH--HHHHHHHHHHHHHHTCTTCCTHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCch---HHHHHHHHHHHHh--cCHHHHHHHHHHHHhccCCchHHHHH
Confidence 345777888899999999999999999999887642 4899999999998 99999999999999999988888877
Q ss_pred HHHH-HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc--cccccC
Q 014213 125 RARC-YEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN--DTVIEL 180 (429)
Q Consensus 125 rA~a-y~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~--e~~~~L 180 (429)
.+.. +..+|++++|...|+++++..|+++.++..+..++..+++...+.. +++...
T Consensus 396 ~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~ 454 (530)
T 2ooe_A 396 AALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 454 (530)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhc
Confidence 7655 4579999999999999999999999999999988877765544444 444443
No 199
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.61 E-value=6.1e-07 Score=73.60 Aligned_cols=82 Identities=13% Similarity=-0.030 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 85 LRSNMAACYMQMGLSEYPRAIHECNLALEVT-------PLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAE 157 (429)
Q Consensus 85 l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld-------P~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~ 157 (429)
-++.+|..++.. ++|..|+.+++.|+... +.....+..+|.||..+|+++.|+..+++++.++|++..++.
T Consensus 7 dc~~lG~~~~~~--~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 7 DCFELGKVAYTE--ADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHc--cchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 457899999999 99999999999999863 346788999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHh
Q 014213 158 IAERVKKELEK 168 (429)
Q Consensus 158 ~La~l~~~l~e 168 (429)
++..+...+..
T Consensus 85 n~~~~~~~~~~ 95 (104)
T 2v5f_A 85 NLKYFEYIMAK 95 (104)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHh
Confidence 88866665543
No 200
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.60 E-value=2e-07 Score=90.89 Aligned_cols=130 Identities=11% Similarity=0.004 Sum_probs=107.4
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc-cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC---
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI-DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY--- 118 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~-~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~--- 118 (429)
-.+..+...|..++..|++++|+..|++++...|.+.. ....+++++|.+|... |+|++|+..+.+++.+.|..
T Consensus 12 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~--g~~~~A~~~~~~al~~~~~~~~~ 89 (373)
T 1hz4_A 12 MHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCK--GELTRSLALMQQTEQMARQHDVW 89 (373)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHHhcCcH
Confidence 34566788899999999999999999999999886543 2455788999999999 99999999999999986543
Q ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHHHhhccccc
Q 014213 119 ---SKALLKRARCYEALNRLDLAFRDVTTVLNKE--------PKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 119 ---~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~--------P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
..+++.+|.+|..+|++++|+..|++++.+. |....++..++.++..+++...+..
T Consensus 90 ~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 156 (373)
T 1hz4_A 90 HYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEA 156 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 2457889999999999999999999999875 3345567778888888777666555
No 201
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.59 E-value=2.7e-07 Score=75.16 Aligned_cols=75 Identities=15% Similarity=0.008 Sum_probs=66.4
Q ss_pred CCCCCccHHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 014213 75 LPRNHIDVSYLRSNMAACYMQMGLSE---YPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPK 151 (429)
Q Consensus 75 ~P~~~~~~a~l~~nrA~~y~kl~~g~---y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~ 151 (429)
+|.++. ++..+|.+++.. ++ .++|...+++||.++|+++++++.+|.+++..|+|++|+..|++++..+|.
T Consensus 2 ~p~~~~----~~~~~a~al~~~--~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAVTAT----QLAAKATTLYYL--HKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCCCHH----HHHHHHHHHHHT--TTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCCCHH----HHHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 466664 888899998765 44 799999999999999999999999999999999999999999999999998
Q ss_pred CHHH
Q 014213 152 NIMA 155 (429)
Q Consensus 152 n~~a 155 (429)
++..
T Consensus 76 ~~~~ 79 (93)
T 3bee_A 76 NLDR 79 (93)
T ss_dssp TCCH
T ss_pred CccH
Confidence 5443
No 202
>1ip9_A BEM1 protein; ubiquitin alpha/beta roll, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1ipg_A 2kfk_A
Probab=98.59 E-value=1.1e-07 Score=76.16 Aligned_cols=66 Identities=20% Similarity=0.220 Sum_probs=58.1
Q ss_pred CCceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCCCCceEEEEECC-CCCEEEecChHHHHHHHHh
Q 014213 259 EPKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPSCRAVLIKYRDE-EGDLVTITTDEELRWAEAS 326 (429)
Q Consensus 259 ~~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~~~~~~iky~De-dgDliti~~~~dl~~a~~~ 326 (429)
..++.||+.|.+||..++||.+++|.+|.++|+++.....-.++-|+|+ +|+ -|.||+||..|++-
T Consensus 10 ~~~~KVK~yy~DDIiAIrvP~di~~~~L~dKi~~RLk~~~~~l~~ykde~~g~--~i~sD~dl~~aiqr 76 (85)
T 1ip9_A 10 LKTTKIKFYYKDDIFALMLKGDTTYKELRSKIAPRIDTDNFKLQTKLFDGSGE--EIKTDSQVSNIIQA 76 (85)
T ss_dssp CCCEEEEECBTTCCEEEEECSCCCHHHHHHHHHHHHTSSCEEEEECCSSSCCS--CCCSHHHHHHHHHT
T ss_pred cCceEEEEEecCcEEEEECCCCCCHHHHHHHHHHHhcccceEEEEecCCCCCC--cccCHHHHHHHHHh
Confidence 3678999999999999999999999999999999997655566667765 677 99999999999984
No 203
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.52 E-value=4.7e-08 Score=95.73 Aligned_cols=122 Identities=11% Similarity=-0.029 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC--HHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY--SKALL 123 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~--~kAl~ 123 (429)
......+..|...|+|++|...|..++...|.+. +++.+|.+++++ ++|++|+..++.++...+.. ..+++
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~-----~~~~~a~l~~~~--~r~~dA~~~l~~a~~~~d~~~~~~a~~ 175 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSEHL-----VAWMKAVVYGAA--ERWTDVIDQVKSAGKWPDKFLAGAAGV 175 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHH-----HHHHHHHHHHHT--TCHHHHHHHHTTGGGCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchH-----HHHHHHHHHHHc--CCHHHHHHHHHHhhccCCcccHHHHHH
Confidence 3455678889999999999999999887666432 778899999999 99999999999887754222 35899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHHHhhccccc
Q 014213 124 KRARCYEALNRLDLAFRDVTTVLNKE--PK-NIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 124 ~rA~ay~~LG~~deAl~~~~kAL~l~--P~-n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
.+|.++..+|++++|+..|++++.-. |. ...++..++.++..+++...+..
T Consensus 176 ~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~ 229 (282)
T 4f3v_A 176 AHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVA 229 (282)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHH
Confidence 99999999999999999999999654 65 66799999999999988777666
No 204
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.48 E-value=2.3e-07 Score=95.97 Aligned_cols=112 Identities=16% Similarity=0.082 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHH-hCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 014213 45 SQELKEEGNKLFQ-------KRDHG-------GALLKYEKALK-LLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECN 109 (429)
Q Consensus 45 A~~lk~~Gn~lf~-------~gdye-------eAl~~Y~kALe-l~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~ 109 (429)
+..|...|..+.. .|+++ +|+..|++|+. +.|.+.. +|.+++..+.++ |++++|+..|+
T Consensus 272 ~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~----l~~~~~~~~~~~--g~~~~A~~~~~ 345 (530)
T 2ooe_A 272 PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNML----LYFAYADYEESR--MKYEKVHSIYN 345 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHH----HHHHHHHHHHHT--TCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHH----HHHHHHHHHHhc--CCHHHHHHHHH
Confidence 4456778888776 79987 99999999998 8998774 999999999999 99999999999
Q ss_pred HHHHhCCCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 014213 110 LALEVTPLYS-KALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERV 162 (429)
Q Consensus 110 ~ALeldP~~~-kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l 162 (429)
++++++|.++ .+|..++.++...|++++|...|++|+...|.+...+...+.+
T Consensus 346 ~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~ 399 (530)
T 2ooe_A 346 RLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALM 399 (530)
T ss_dssp HHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHH
T ss_pred HHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHH
Confidence 9999999985 6999999999999999999999999999998876665554444
No 205
>2cu1_A Mitogen-activated protein kinase kinase kinase 2; PB1 domain, MAPK/ERK kinase kinase 2, MEK kinase 2, MEKK 2, signaling protein; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=98.42 E-value=1.5e-06 Score=71.30 Aligned_cols=77 Identities=21% Similarity=0.267 Sum_probs=68.7
Q ss_pred CceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCCCCceEEEEECCCCCEEEecChHHHHHHHHh---hccCCcEEEE
Q 014213 260 PKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPSCRAVLIKYRDEEGDLVTITTDEELRWAEAS---AEMQGSVRLF 336 (429)
Q Consensus 260 ~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~~~~~~iky~DedgDliti~~~~dl~~a~~~---~~~~~~~rl~ 336 (429)
..++||+-|+.+.|+++++..++|.+|+.++...|+ ..+.|.|.| ..=+|.|++++||+-|++. +..+.++||+
T Consensus 7 ~dvRiKfE~~GEkRIi~f~RPv~f~eL~~Kv~~~fG--q~ldL~y~n-~EllIpl~sQeDLDkaIellDrss~~kSLrIl 83 (103)
T 2cu1_A 7 GDVRVKFEHRGEKRILQFPRPVKLEDLRSKAKIAFG--QSMDLHYTN-NELVIPLTTQDDLDKAVELLDRSIHMKSLKIL 83 (103)
T ss_dssp CEEEEEEEETTEEEEEEEESSCCHHHHHHHHHHHHS--SCEEEEECS-SSSCEECCSHHHHHHHHHHHHHCSSCCSEEEE
T ss_pred CcEEEEEEecCeEEEEeccCCccHHHHHHHHHHHhC--CeeeEEEec-ceEEEeccCHHHHHHHHHHHccCCcccceEEE
Confidence 578999999999999999999999999999999995 589999997 6689999999999999765 4557789998
Q ss_pred EEe
Q 014213 337 VVG 339 (429)
Q Consensus 337 v~e 339 (429)
+..
T Consensus 84 L~~ 86 (103)
T 2cu1_A 84 LVI 86 (103)
T ss_dssp EEE
T ss_pred Eec
Confidence 774
No 206
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.41 E-value=2.6e-06 Score=73.11 Aligned_cols=98 Identities=11% Similarity=-0.053 Sum_probs=82.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHH----cCCCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 014213 51 EGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQ----MGLSEYPRAIHECNLALEVTPLYSKALLKRA 126 (429)
Q Consensus 51 ~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~k----l~~g~y~eAi~~~~~ALeldP~~~kAl~~rA 126 (429)
.|..|+..+.+++|+..|.+|.+. .++ .+++++|.+|.. . +++.+|+.++++|.+. .++.+++++|
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g~~----~a~~~Lg~~y~~G~g~~--~d~~~A~~~~~~Aa~~--g~~~a~~~Lg 100 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--NSG----NGCRFLGDFYENGKYVK--KDLRKAAQYYSKACGL--NDQDGCLILG 100 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--TCH----HHHHHHHHHHHHCSSSC--CCHHHHHHHHHHHHHT--TCHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--CCH----HHHHHHHHHHHcCCCCC--ccHHHHHHHHHHHHcC--CCHHHHHHHH
Confidence 778888888899999999999987 344 488999999998 6 8999999999999887 6799999999
Q ss_pred HHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 014213 127 RCYEA----LNRLDLAFRDVTTVLNKEPKNIMAAEIAE 160 (429)
Q Consensus 127 ~ay~~----LG~~deAl~~~~kAL~l~P~n~~a~~~La 160 (429)
.+|.. .+++++|+.+|++|..+ +++.+...++
T Consensus 101 ~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~l~ 136 (138)
T 1klx_A 101 YKQYAGKGVVKNEKQAVKTFEKACRL--GSEDACGILN 136 (138)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHC-
T ss_pred HHHHCCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHh
Confidence 99999 89999999999999987 4555555443
No 207
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.40 E-value=3.5e-06 Score=85.30 Aligned_cols=132 Identities=11% Similarity=-0.011 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCC-C--C--HHHHHHHHH---HHHH
Q 014213 45 SQELKEEGNKLFQKRD---HGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGL-S--E--YPRAIHECN---LALE 113 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gd---yeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~-g--~--y~eAi~~~~---~ALe 113 (429)
|-.+..+|..++..++ +.+|+.+|++||+++|+++. +|..++.||+.+.. + . ...++.... .++.
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~----A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~ 271 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTY----ARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLP 271 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcc
Confidence 4557778888887655 58899999999999999874 66666666653200 0 0 111111111 1224
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccc--cccccCC
Q 014213 114 VTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLRVN--DTVIELP 181 (429)
Q Consensus 114 ldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a~~--e~~~~L~ 181 (429)
.+|..+.+|..+|.++...|++++|+..+++|+.++|+ ..++..++.++...++...+.. +++..|+
T Consensus 272 ~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~ 340 (372)
T 3ly7_A 272 ELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLR 340 (372)
T ss_dssp GGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred cCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 55777777777777777777777777777777777753 5566677777777766555555 3344444
No 208
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.37 E-value=1.1e-06 Score=91.98 Aligned_cols=102 Identities=8% Similarity=-0.102 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh-----
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKL----LPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV----- 114 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel----~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel----- 114 (429)
.+..+.+.|..|...|+|++|+.+|.++|.+ .+.++++.+..++|+|.+|..+ |+|++|+..+++|+++
T Consensus 350 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~--G~~~eA~~~~~~Al~i~~~~l 427 (490)
T 3n71_A 350 VLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHA--GHIEVGHGMICKAYAILLVTH 427 (490)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHh
Confidence 4566889999999999999999999999976 4667778999999999999999 9999999999999976
Q ss_pred CCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 014213 115 TPLYS---KALLKRARCYEALNRLDLAFRDVTTVLN 147 (429)
Q Consensus 115 dP~~~---kAl~~rA~ay~~LG~~deAl~~~~kAL~ 147 (429)
-|+++ ..+-.++.++..++.|++|...|.++..
T Consensus 428 G~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 428 GPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46664 4567889999999999999999988754
No 209
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.34 E-value=2.8e-06 Score=86.86 Aligned_cols=110 Identities=12% Similarity=-0.036 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCC---CHHHHHHHHHHHHHhC
Q 014213 44 MSQELKEEGNKLFQK-----RDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLS---EYPRAIHECNLALEVT 115 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~-----gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g---~y~eAi~~~~~ALeld 115 (429)
.+..+...|..|... +++++|+..|.+|++..+ . .+++++|.+|... | ++++|+..|++|++.
T Consensus 290 ~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~~--~----~a~~~lg~~y~~~--g~~~~~~~A~~~~~~a~~~- 360 (490)
T 2xm6_A 290 NSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQGD--A----TAQANLGAIYFRL--GSEEEHKKAVEWFRKAAAK- 360 (490)
T ss_dssp CHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTTC--H----HHHHHHHHHHHHS--CCHHHHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcCC--H----HHHHHHHHHHHhC--CCcccHHHHHHHHHHHHHC-
Confidence 355667777777776 778888888887777532 2 3667777777775 4 677777777777776
Q ss_pred CCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 014213 116 PLYSKALLKRARCYEA----LNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKE 165 (429)
Q Consensus 116 P~~~kAl~~rA~ay~~----LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~ 165 (429)
.++.+++.+|.+|.. .+++++|+.+|++++.. +++.++..++.++..
T Consensus 361 -~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~ 411 (490)
T 2xm6_A 361 -GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYY 411 (490)
T ss_dssp -TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHc
Confidence 467777777777777 77777777777777765 357777777777765
No 210
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.28 E-value=4.6e-06 Score=72.14 Aligned_cols=104 Identities=17% Similarity=0.099 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHH---HHHHHHHHHHhC-C-CCHHHHHHHHHHHHHcC
Q 014213 59 RDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPR---AIHECNLALEVT-P-LYSKALLKRARCYEALN 133 (429)
Q Consensus 59 gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~e---Ai~~~~~ALeld-P-~~~kAl~~rA~ay~~LG 133 (429)
.....+-..|.+++...+.+. .+.++.|.|+.+. ..... +|..++..+..+ | .....+|.+|.+++.+|
T Consensus 15 ~~l~~~~~~y~~e~~~~~~s~----~~~F~yAw~Lv~S--~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg 88 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSVSK----STQFEYAWCLVRT--RYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLK 88 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCCCH----HHHHHHHHHHTTS--SSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhccCCCcH----HHHHHHHHHHHcC--CCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhh
Confidence 345567778888888766555 3778899999887 55555 899999888877 5 56789999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 014213 134 RLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEK 168 (429)
Q Consensus 134 ~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e 168 (429)
+|+.|+.+++.+|.++|+|..+......+...+..
T Consensus 89 ~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i~k 123 (126)
T 1nzn_A 89 EYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 123 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998887754
No 211
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.26 E-value=1.9e-05 Score=80.61 Aligned_cols=110 Identities=14% Similarity=0.039 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHH----cCCCCHHHHHHHHHHHHHhC
Q 014213 44 MSQELKEEGNKLFQ----KRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQ----MGLSEYPRAIHECNLALEVT 115 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~----~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~k----l~~g~y~eAi~~~~~ALeld 115 (429)
.+..+...|..|+. .+++++|+..|.+|++. .++ .+++++|.+|+. . +++++|+..|++|++.
T Consensus 38 ~~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~--~~~----~a~~~Lg~~y~~g~g~~--~~~~~A~~~~~~a~~~- 108 (490)
T 2xm6_A 38 EAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ--GYT----PAEYVLGLRYMNGEGVP--QDYAQAVIWYKKAALK- 108 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH----HHHHHHHHHHHHTSSSC--CCHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC--CCH----HHHHHHHHHHHcCCCCC--CCHHHHHHHHHHHHHC-
Confidence 45667788888888 88888888888888876 333 377788888887 6 7888888888888765
Q ss_pred CCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 014213 116 PLYSKALLKRARCYEA----LNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKE 165 (429)
Q Consensus 116 P~~~kAl~~rA~ay~~----LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~ 165 (429)
.++.+++.+|.+|.. .+++++|+..|++++.. +++.++..++.++..
T Consensus 109 -~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~ 159 (490)
T 2xm6_A 109 -GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYFE 159 (490)
T ss_dssp -TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHc
Confidence 477888888888887 77888888888888764 577778888777654
No 212
>2npt_A Dual specificity mitogen-activated protein kinase; MAP2K5, MEK5, MKK PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain; 1.75A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_A 1wi0_A
Probab=98.23 E-value=3.9e-06 Score=67.77 Aligned_cols=71 Identities=18% Similarity=0.270 Sum_probs=61.4
Q ss_pred CCCCceeEEEEeCCceEEEEcc-CCccHHHHHHHHHhhCCCCCceEEEEECCCCCEEEecChHHHHHHHHhh
Q 014213 257 DNEPKKTVKLVFGEDIRVAQLP-LNSSLLQLREVISDRFPSCRAVLIKYRDEEGDLVTITTDEELRWAEASA 327 (429)
Q Consensus 257 ~~~~~~~vK~~~~~DiR~~~i~-~~~~~~~L~~~v~~kf~~~~~~~iky~DedgDliti~~~~dl~~a~~~~ 327 (429)
...--++||.--++|+-|.+=+ ..++|.+|.+.|++..|....-..-|.|||||.||+-||+||+--+++.
T Consensus 12 a~~lVIRIk~p~~g~vDwaV~~~~~L~FrDvL~~I~~vmP~aT~TAFeYEDE~gDRITVRSDeE~kAMlsyy 83 (106)
T 2npt_A 12 NQVLVIRIKIPNSGAVDWTVHSGPQLLFRDVLDVIGQVLPEATTTAFEYEDEDGDRITVRSDEEMKAMLSYY 83 (106)
T ss_dssp -CCEEEEEEETTTEEEEEEECC--CCCHHHHHHHHHHHSTTSCCSEEEEECTTSCEEEECSHHHHHHHHHHH
T ss_pred cCceEEEEECCCCCccccccCCcccccHHHHHHHHHHhCccceeeeeeeccccCCeeEEcchHHHHHHHHHH
Confidence 3455688999888999998864 7799999999999999999999999999999999999999998766654
No 213
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.16 E-value=1e-05 Score=82.73 Aligned_cols=104 Identities=13% Similarity=0.038 Sum_probs=85.1
Q ss_pred HHHHHHHHHc----CCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHH-HcCCCCHHHHHHHHHHHHHhCCCCHHHHH
Q 014213 49 KEEGNKLFQK----RDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYM-QMGLSEYPRAIHECNLALEVTPLYSKALL 123 (429)
Q Consensus 49 k~~Gn~lf~~----gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~-kl~~g~y~eAi~~~~~ALeldP~~~kAl~ 123 (429)
.+.|..|... +++++|+..|.+|+ |.++. +++++|.+|+ ....+++++|+.+|++|++.. ++.+++
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~----a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~ 287 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA---PGYPA----SWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAEL 287 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTH----HHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHH
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHH----HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHH
Confidence 6677777655 78999999999988 77774 8889999844 112489999999999988654 889999
Q ss_pred HHHHHHHHcC-----CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 014213 124 KRARCYEALN-----RLDLAFRDVTTVLNKEPKNIMAAEIAERVKKE 165 (429)
Q Consensus 124 ~rA~ay~~LG-----~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~ 165 (429)
++|.+|. .| ++++|+.+|++|. |+++.+...++.++..
T Consensus 288 ~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~ 330 (452)
T 3e4b_A 288 LLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRR 330 (452)
T ss_dssp HHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHT
T ss_pred HHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHC
Confidence 9999998 66 9999999999998 8899999999987764
No 214
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.09 E-value=1.2e-05 Score=79.28 Aligned_cols=130 Identities=11% Similarity=0.056 Sum_probs=98.9
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc--cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC-----
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI--DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVT----- 115 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~--~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld----- 115 (429)
.....+.+.|..|+..|+|++|+..|.+++.+.+.... ....++.+++.++... ++++.|+..|..++.+.
T Consensus 53 ~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~ 130 (434)
T 4b4t_Q 53 EQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVP--DSLDDQIFVCEKSIEFAKREKR 130 (434)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCC--SCHHHHHHHHHHHHHHHHHSSC
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHHHHHhCc
Confidence 44556889999999999999999999999998775432 1234566777777666 88999999998888763
Q ss_pred -CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHHhhccccc
Q 014213 116 -PLYSKALLKRARCYEALNRLDLAFRDVTTVLNK------EPKNIMAAEIAERVKKELEKRGLRVN 174 (429)
Q Consensus 116 -P~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l------~P~n~~a~~~La~l~~~l~e~~~a~~ 174 (429)
+...+++.++|.+|..+|+|++|+..++.++.. .|....++..+.+++..+++...+..
T Consensus 131 ~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 196 (434)
T 4b4t_Q 131 VFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKA 196 (434)
T ss_dssp CSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHH
Confidence 334678888999999999999999999888875 22335677777777777766554444
No 215
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.08 E-value=1.6e-05 Score=81.42 Aligned_cols=109 Identities=12% Similarity=0.047 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHcC---CHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHhCCCCHHH
Q 014213 47 ELKEEGNKLFQKR---DHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQM--GLSEYPRAIHECNLALEVTPLYSKA 121 (429)
Q Consensus 47 ~lk~~Gn~lf~~g---dyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl--~~g~y~eAi~~~~~ALeldP~~~kA 121 (429)
.+...|..|...| ++++|+..|.+|++..|... ..++++|.+|... ..+++++|+..|+++. |.++.+
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a----~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a 250 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTA----QRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPAS 250 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCH----HHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHH----HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHH
Confidence 4678899999999 99999999999999988766 3668899998542 1258999999999998 899999
Q ss_pred HHHHHHH-H--HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 014213 122 LLKRARC-Y--EALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKK 164 (429)
Q Consensus 122 l~~rA~a-y--~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~ 164 (429)
++++|.+ | ...+++++|+.+|++++.. +++.+...++.++.
T Consensus 251 ~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~ 294 (452)
T 3e4b_A 251 WVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY 294 (452)
T ss_dssp HHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 9999998 4 5788999999999999864 58999999998886
No 216
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.04 E-value=3.2e-05 Score=66.23 Aligned_cols=93 Identities=14% Similarity=-0.023 Sum_probs=82.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCC
Q 014213 59 RDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEA----LNR 134 (429)
Q Consensus 59 gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~----LG~ 134 (429)
+++++|+..|.+|.+..... +. +|.+|... ..+++|+..+++|.+. .++.+++++|.+|.. .++
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~------a~--lg~~y~~g--~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d 76 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMF------GC--LSLVSNSQ--INKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKD 76 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTT------HH--HHHHTCTT--SCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCC
T ss_pred cCHHHHHHHHHHHHcCCCHh------hh--HHHHHHcC--CCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCcc
Confidence 57899999999999986332 33 89999887 8899999999999987 689999999999999 899
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 014213 135 LDLAFRDVTTVLNKEPKNIMAAEIAERVKKE 165 (429)
Q Consensus 135 ~deAl~~~~kAL~l~P~n~~a~~~La~l~~~ 165 (429)
+++|+.+|++|... +++.+...++.++..
T Consensus 77 ~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 77 LRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 99999999999987 789999999998875
No 217
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.95 E-value=2e-05 Score=77.78 Aligned_cols=99 Identities=15% Similarity=0.109 Sum_probs=84.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC--CccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh------CCCCHHH
Q 014213 50 EEGNKLFQKRDHGGALLKYEKALKLLPRN--HIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV------TPLYSKA 121 (429)
Q Consensus 50 ~~Gn~lf~~gdyeeAl~~Y~kALel~P~~--~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel------dP~~~kA 121 (429)
..|..+...|+++.|+..|.+++...+.. ...++.++.++|.+|..+ |+|.+|+..+..++.. .+....+
T Consensus 100 ~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~--g~~~~A~~~l~~~~~~~~~~~~~~~~~~~ 177 (434)
T 4b4t_Q 100 LIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQK--KQYKDSLALINDLLREFKKLDDKPSLVDV 177 (434)
T ss_dssp HHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHTTSSCSTHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHc--cChHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 45666667899999999999999886543 235678999999999999 9999999999999876 2345678
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 014213 122 LLKRARCYEALNRLDLAFRDVTTVLNKEP 150 (429)
Q Consensus 122 l~~rA~ay~~LG~~deAl~~~~kAL~l~P 150 (429)
++..+.+|..+|+|+.|...+++++.+.+
T Consensus 178 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 178 HLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999998754
No 218
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.95 E-value=4.1e-05 Score=88.66 Aligned_cols=107 Identities=12% Similarity=0.173 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCC---------
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTP--------- 116 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP--------- 116 (429)
..+...|+.++..|+|++|+.+|.+| ..|..+|.||.++ |+|++|++.+.+|....+
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA------------~ny~rLA~tLvkL--ge~q~AIEaarKA~n~~aWkev~~acv 1261 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNV------------SNFGRLASTLVHL--GEYQAAVDGARKANSTRTWKEVCFACV 1261 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhh------------hHHHHHHHHHHHh--CCHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 45778999999999999999999996 2678899999999 999999999999854433
Q ss_pred ----------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 014213 117 ----------------LYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKEL 166 (429)
Q Consensus 117 ----------------~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l 166 (429)
.++..+..++..|..+|.|++|+..|+++|.++|.+......++.++..-
T Consensus 1262 e~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy 1327 (1630)
T 1xi4_A 1262 DGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 1327 (1630)
T ss_pred hhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhC
Confidence 23445667778899999999999999999999999999988888776543
No 219
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.93 E-value=2.5e-05 Score=77.26 Aligned_cols=98 Identities=10% Similarity=-0.138 Sum_probs=57.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCC------CCH
Q 014213 48 LKEEGNKLFQKRDHGGALLKYEKALKLLP--RNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTP------LYS 119 (429)
Q Consensus 48 lk~~Gn~lf~~gdyeeAl~~Y~kALel~P--~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP------~~~ 119 (429)
+...|..++..|++++|+..|.++|...| .+.+ ++..++.+|+++ |+++.|...+++..+++| +..
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~le----a~~l~vqi~L~~--~r~d~A~k~l~~~~~~~~d~~~~~d~~ 176 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTE----LLLLAIEVALLN--NNVSTASTIFDNYTNAIEDTVSGDNEM 176 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHH----HHHHHHHHHHHC--CCHHHHHHHHHHHHhcCccccccchHH
Confidence 45677777777888888877777777765 5543 555566666666 666666666666666665 222
Q ss_pred HHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCC
Q 014213 120 KALLKRARCYEALN--RLDLAFRDVTTVLNKEPK 151 (429)
Q Consensus 120 kAl~~rA~ay~~LG--~~deAl~~~~kAL~l~P~ 151 (429)
..++.-|.+....| ++.+|+..|+++....|+
T Consensus 177 l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 177 ILNLAESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 22222232333334 555555555555444443
No 220
>2jrh_A Mitogen-activated protein kinase kinase kinase 3; kinase signaling domain, transferase; NMR {Homo sapiens} PDB: 2pph_A
Probab=97.92 E-value=0.00016 Score=58.04 Aligned_cols=78 Identities=10% Similarity=0.198 Sum_probs=68.8
Q ss_pred CceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCCCCceEEEEECCCCCEEEecChHHHHHHHHh---hccCCcEEEE
Q 014213 260 PKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPSCRAVLIKYRDEEGDLVTITTDEELRWAEAS---AEMQGSVRLF 336 (429)
Q Consensus 260 ~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~~~~~~iky~DedgDliti~~~~dl~~a~~~---~~~~~~~rl~ 336 (429)
..++||+-|..+-|.++++.-+.|.+|..+|...|+ ..+.|.|.. ..=+|.+.+++||+-|++. +..+.++||.
T Consensus 3 ~dvRIKfE~~gEKRIi~f~RPvkf~dl~qkv~~afG--q~ldl~y~n-nEL~iPL~~Q~DLDkAvelLDrs~~mkSLRIl 79 (94)
T 2jrh_A 3 SDVRIKFEHNGERRIIAFSRPVKYEDVEHKVTTVFG--QPLDLHYMN-NELSILLKNQDDLDKAIDILDRSSSMKSLRIL 79 (94)
T ss_dssp CCEEEEEEETTEEEEEEECSSCCHHHHHHHHHHHHC--SSEEEEEEC-SSCEEECCSHHHHHHHHHHHHHSTTTTEEEEE
T ss_pred CceEEEEEecCceEEEecCCCccHHHHHHHHHHHhC--CeeeeEEec-ceeEEeccCHHHHHHHHHHhccCccccceEEE
Confidence 468999999999999999999999999999999994 679999995 6689999999999999765 4557789998
Q ss_pred EEee
Q 014213 337 VVGV 340 (429)
Q Consensus 337 v~e~ 340 (429)
+..-
T Consensus 80 L~~~ 83 (94)
T 2jrh_A 80 LLSQ 83 (94)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 8753
No 221
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.91 E-value=2.5e-05 Score=80.93 Aligned_cols=104 Identities=13% Similarity=0.189 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCC----------
Q 014213 47 ELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTP---------- 116 (429)
Q Consensus 47 ~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP---------- 116 (429)
.+...|+.++..|.|++|..+|.++ . .|.++|.|+.++ |+|++|+..+.+|. +|
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a-------~-----n~~~LA~~L~~L--g~yq~AVea~~KA~--~~~~Wk~v~~aC 187 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV-------S-----NFGRLASTLVHL--GEYQAAVDGARKAN--STRTWKEVCFAC 187 (449)
T ss_dssp -------------CTTTHHHHHHHT-------T-----CHHHHHHHHHTT--TCHHHHHHHHHHHT--CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-------h-----hHHHHHHHHHHh--ccHHHHHHHHHHcC--CchhHHHHHHHH
Confidence 6778888888888888888888876 1 457788888888 88888888888882 22
Q ss_pred -----------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 014213 117 -----------------LYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKEL 166 (429)
Q Consensus 117 -----------------~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l 166 (429)
.++.-+..+..+|...|++++|+..++++|.+++.+..++..++.++...
T Consensus 188 v~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky 254 (449)
T 1b89_A 188 VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 254 (449)
T ss_dssp HHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTT
T ss_pred HHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhc
Confidence 11122233446788888999999999999999988888888887766543
No 222
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.90 E-value=4.6e-05 Score=74.84 Aligned_cols=89 Identities=13% Similarity=0.070 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcC---CCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH-cCCH
Q 014213 61 HGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMG---LSEYPRAIHECNLALEVTPLY-SKALLKRARCYEA-LNRL 135 (429)
Q Consensus 61 yeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~---~g~y~eAi~~~~~ALeldP~~-~kAl~~rA~ay~~-LG~~ 135 (429)
...|...+++||+++|+... ..+|..+|..|.++- -|+.++|...|++||+++|+. ..+++..|..|.. .|++
T Consensus 179 l~~A~a~lerAleLDP~~~~--GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~ 256 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQE--GAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNR 256 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHH--HHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCH
T ss_pred HHHHHHHHHHHHHhCCCccc--CHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCH
Confidence 56788999999999998321 358999999999931 189999999999999999975 9999999999988 5999
Q ss_pred HHHHHHHHHHHHhCCC
Q 014213 136 DLAFRDVTTVLNKEPK 151 (429)
Q Consensus 136 deAl~~~~kAL~l~P~ 151 (429)
++|...+++|+..+|.
T Consensus 257 ~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 257 AGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHcCCCC
Confidence 9999999999998776
No 223
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.86 E-value=5e-05 Score=61.50 Aligned_cols=68 Identities=22% Similarity=0.206 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC
Q 014213 45 SQELKEEGNKLFQKRD---HGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY 118 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gd---yeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~ 118 (429)
+..+...|..++..++ ..+|...+++||.++|++.. ++..+|..+++. |+|++|+..++++++.+|..
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~r----A~~~lg~~~~~~--g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEA----ALSLIANDHFIS--FRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHH----HHHHHHHHHHHc--CCHHHHHHHHHHHHhhCCCC
Confidence 3457788888876655 79999999999999999985 889999999999 99999999999999999983
No 224
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.75 E-value=0.00017 Score=62.81 Aligned_cols=86 Identities=15% Similarity=0.077 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 014213 84 YLRSNMAACYMQMGL-SEYPRAIHECNLALEVTPL-YSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAER 161 (429)
Q Consensus 84 ~l~~nrA~~y~kl~~-g~y~eAi~~~~~ALeldP~-~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~ 161 (429)
...++.|.|+.+.+. .+..++|..++..+..+|. ....+|.+|.+++.+|+|+.|+++++.+|.++|+|..|......
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 467788888888621 1455799999999999984 57799999999999999999999999999999999999999999
Q ss_pred HHHHHHhh
Q 014213 162 VKKELEKR 169 (429)
Q Consensus 162 l~~~l~e~ 169 (429)
+...+...
T Consensus 121 Ie~ki~kd 128 (134)
T 3o48_A 121 VEDKIQKE 128 (134)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 98888643
No 225
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.75 E-value=8.5e-05 Score=76.32 Aligned_cols=88 Identities=14% Similarity=0.122 Sum_probs=73.9
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh----
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKL----LPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV---- 114 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel----~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel---- 114 (429)
..+..+.+.|..|...|+|++|+.+|.++|.+ .+.++++.+..++|+|.+|..+ |+|++|+..+++|+++
T Consensus 327 ~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~--g~~~eA~~~~~~Al~i~~~~ 404 (429)
T 3qwp_A 327 YQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQ--GMFPQAMKNLRLAFDIMRVT 404 (429)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHh
Confidence 34667889999999999999999999999975 5677778999999999999999 9999999999999976
Q ss_pred -CCCCHH---HHHHHHHHHHHc
Q 014213 115 -TPLYSK---ALLKRARCYEAL 132 (429)
Q Consensus 115 -dP~~~k---Al~~rA~ay~~L 132 (429)
-|+++. ++.+++.|...+
T Consensus 405 lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 405 HGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp TCTTSHHHHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHH
Confidence 466654 456666666544
No 226
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.74 E-value=8e-05 Score=66.35 Aligned_cols=79 Identities=15% Similarity=0.064 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-CCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHH
Q 014213 45 SQELKEEGNKLFQKR---DHGGALLKYEKALKLL-PRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSK 120 (429)
Q Consensus 45 A~~lk~~Gn~lf~~g---dyeeAl~~Y~kALel~-P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~k 120 (429)
.+..++.|..+.+.+ ++.+++..++..++.+ |.+ ...+++++|..|+++ ++|.+|+.+|+++|+++|+|..
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~---~rd~lY~LAv~~~kl--~~Y~~A~~y~~~lL~ieP~n~Q 106 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEE---QRDYVFYLAVGNYRL--KEYEKALKYVRGLLQTEPQNNQ 106 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHH---HHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccc---hHHHHHHHHHHHHHc--cCHHHHHHHHHHHHhcCCCCHH
Confidence 356778899999988 7779999999999988 522 235889999999999 9999999999999999999998
Q ss_pred HHHHHHHH
Q 014213 121 ALLKRARC 128 (429)
Q Consensus 121 Al~~rA~a 128 (429)
|...+-.+
T Consensus 107 A~~Lk~~i 114 (152)
T 1pc2_A 107 AKELERLI 114 (152)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87665444
No 227
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.72 E-value=0.00017 Score=71.29 Aligned_cols=82 Identities=13% Similarity=0.073 Sum_probs=73.2
Q ss_pred HHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHcCCHHHHHHH
Q 014213 64 ALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTP--LYSKALLKRARCYEALNRLDLAFRD 141 (429)
Q Consensus 64 Al~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP--~~~kAl~~rA~ay~~LG~~deAl~~ 141 (429)
|+..+++.+...+.+. ..+..+|.+|... |++++|+..|.++|..+| .+..++..++.+|..+|+++.|.+.
T Consensus 85 a~~~l~~l~~~~~~~~----~~~~~la~i~~~~--g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~ 158 (310)
T 3mv2_B 85 NIEELENLLKDKQNSP----YELYLLATAQAIL--GDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTI 158 (310)
T ss_dssp CCHHHHHTTTTSCCCH----HHHHHHHHHHHHH--TCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhcCCCCc----HHHHHHHHHHHHc--CCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHH
Confidence 8888988887654443 3556899999999 999999999999999997 9999999999999999999999999
Q ss_pred HHHHHHhCCC
Q 014213 142 VTTVLNKEPK 151 (429)
Q Consensus 142 ~~kAL~l~P~ 151 (429)
++++.+.+|+
T Consensus 159 l~~~~~~~~d 168 (310)
T 3mv2_B 159 FDNYTNAIED 168 (310)
T ss_dssp HHHHHHHSCH
T ss_pred HHHHHhcCcc
Confidence 9999999993
No 228
>2npt_B Mitogen-activated protein kinase kinase kinase 2; MAP2K5, MEK5, MKK PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain; 1.75A {Homo sapiens} SCOP: d.15.2.2
Probab=97.72 E-value=0.00031 Score=57.01 Aligned_cols=77 Identities=21% Similarity=0.270 Sum_probs=67.9
Q ss_pred CceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCCCCceEEEEECCCCCEEEecChHHHHHHHHh---hccCCcEEEE
Q 014213 260 PKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPSCRAVLIKYRDEEGDLVTITTDEELRWAEAS---AEMQGSVRLF 336 (429)
Q Consensus 260 ~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~~~~~~iky~DedgDliti~~~~dl~~a~~~---~~~~~~~rl~ 336 (429)
..++||+-|..+-|.++++.-+.|.+|..+|...|+ ..+.|.|.. ..=+|.+.+++||+-|++. +..+.++||.
T Consensus 19 ~dvRIKfE~~gEkRIi~f~RPv~f~el~~kv~~afG--q~ldl~y~n-nEL~iPL~~Q~DLDkAvelLDrs~~~kSLrIl 95 (100)
T 2npt_B 19 NDVRVKFEHRGEKRILQFPRPVKLEDLRSKAKIAFG--QSMDLHYTN-NELVIPLTTQDDLDKAVELLDRSIHMKSLKIL 95 (100)
T ss_dssp CCEEEEEEETTEEEEEEECSSCCHHHHHHHHHHHHT--SCEEEEEEE-TTEEEECCCHHHHHHHHHHHHHCSSCCSEEEE
T ss_pred cceEEEEEecCceEEEecCCCccHHHHHHHHHHHhC--CeeeeEEec-ceeEEecccHHHHHHHHHHhccCccccceEEE
Confidence 578999999999999999999999999999999994 679999995 6678999999999999765 3557779988
Q ss_pred EEe
Q 014213 337 VVG 339 (429)
Q Consensus 337 v~e 339 (429)
+..
T Consensus 96 L~~ 98 (100)
T 2npt_B 96 LVI 98 (100)
T ss_dssp EEE
T ss_pred Eec
Confidence 864
No 229
>2c60_A Human mitogen-activated protein kinase kinase kinase 3 isoform 2; MAP3K3, MAP/ERK kinase kinase 3, MAPKKK3, MEKK3, serine threonine phosphorylation; HET: MSE; 1.25A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_B
Probab=97.71 E-value=0.00035 Score=57.42 Aligned_cols=77 Identities=10% Similarity=0.207 Sum_probs=67.9
Q ss_pred CceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCCCCceEEEEECCCCCEEEecChHHHHHHHHh---hccCCcEEEE
Q 014213 260 PKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPSCRAVLIKYRDEEGDLVTITTDEELRWAEAS---AEMQGSVRLF 336 (429)
Q Consensus 260 ~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~~~~~~iky~DedgDliti~~~~dl~~a~~~---~~~~~~~rl~ 336 (429)
..++||+-|..+-|.++++.-+.|.+|..++...|+ ..+.|.|.. ..=+|.+.+++||+-|++. +..+.++||.
T Consensus 30 ~dvRIKfE~~gEKRIiqf~RPvkf~dl~qkv~~afG--q~ldl~y~n-nEL~IPL~~Q~DLDkAvelLDrs~~mkSLRIl 106 (111)
T 2c60_A 30 SDVRIKFEHNGERRIIAFSRPVKYEDVEHKVTTVFG--QPLDLHYMN-NELSILLKNQDDLDKAIDILDRSSSMKSLRIL 106 (111)
T ss_dssp CCEEEEEEETTEEEEEEECSSCCHHHHHHHHHHHHS--SCCEEEEEC-SSCEEECCSHHHHHHHHHHHHHCSSCCSEEEE
T ss_pred cceEEEEEecCceEEEecCCCccHHHHHHHHHHHhC--CeeeeEEec-ceEEEecccHHHHHHHHHHhccCccccceEEE
Confidence 578999999999999999999999999999999994 678999995 6688999999999999765 3557779988
Q ss_pred EEe
Q 014213 337 VVG 339 (429)
Q Consensus 337 v~e 339 (429)
+..
T Consensus 107 L~~ 109 (111)
T 2c60_A 107 LLS 109 (111)
T ss_dssp EEC
T ss_pred Eec
Confidence 763
No 230
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.70 E-value=0.00044 Score=60.89 Aligned_cols=87 Identities=15% Similarity=0.094 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 014213 84 YLRSNMAACYMQMG-LSEYPRAIHECNLALEVTPL-YSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAER 161 (429)
Q Consensus 84 ~l~~nrA~~y~kl~-~g~y~eAi~~~~~ALeldP~-~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~ 161 (429)
...++.|.|+.+.+ +.+..++|..++..+..+|. ....+|.+|.+++.+|+|.+|+++++.+|.++|+|.++......
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 119 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 36788888888862 12345799999999999985 56789999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc
Q 014213 162 VKKELEKRG 170 (429)
Q Consensus 162 l~~~l~e~~ 170 (429)
+...+...+
T Consensus 120 Ie~~i~kdG 128 (144)
T 1y8m_A 120 VEDKIQKET 128 (144)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhc
Confidence 998886544
No 231
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.63 E-value=0.00016 Score=74.57 Aligned_cols=76 Identities=16% Similarity=0.144 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh-----
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKL----LPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV----- 114 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel----~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel----- 114 (429)
.+..+.+.|..|...|+|++|+.+|+++|.+ .+.++++.+..++|+|.+|..+ |+|++|+..+++|+++
T Consensus 339 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~q--g~~~eA~~~~~~Al~i~~~~l 416 (433)
T 3qww_A 339 MLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGL--ENKAAGEKALKKAIAIMEVAH 416 (433)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHc
Confidence 4566889999999999999999999999975 4667778999999999999999 9999999999999976
Q ss_pred CCCCHHH
Q 014213 115 TPLYSKA 121 (429)
Q Consensus 115 dP~~~kA 121 (429)
.|+++..
T Consensus 417 G~~Hp~~ 423 (433)
T 3qww_A 417 GKDHPYI 423 (433)
T ss_dssp CTTCHHH
T ss_pred CCCChHH
Confidence 4666543
No 232
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.56 E-value=0.0003 Score=81.62 Aligned_cols=90 Identities=11% Similarity=0.028 Sum_probs=72.3
Q ss_pred HHHHHHHcCCHHHHHHHHHHHH--------------------HhC--CCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 014213 51 EGNKLFQKRDHGGALLKYEKAL--------------------KLL--PRNHIDVSYLRSNMAACYMQMGLSEYPRAIHEC 108 (429)
Q Consensus 51 ~Gn~lf~~gdyeeAl~~Y~kAL--------------------el~--P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~ 108 (429)
.|..+...|.|++|...|+++- ++. ... ..+|+++|.++..+ |+|++|+..|
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~----p~vWsqLAKAql~~--G~~kEAIdsY 1128 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNE----PAVWSQLAKAQLQK--GMVKEAIDSY 1128 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCC----HHHHHHHHHHHHhC--CCHHHHHHHH
Confidence 3667777777777766666542 111 111 35899999999999 9999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 014213 109 NLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPK 151 (429)
Q Consensus 109 ~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~ 151 (429)
.+| +++.+|++.|.++..+|+|++|+++|.+|.+..+.
T Consensus 1129 iKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1129 IKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred Hhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 776 89999999999999999999999999999988754
No 233
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.53 E-value=0.00062 Score=61.38 Aligned_cols=114 Identities=16% Similarity=0.121 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc-----cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC---CCC
Q 014213 47 ELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI-----DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVT---PLY 118 (429)
Q Consensus 47 ~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~-----~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld---P~~ 118 (429)
.+++....++..+.|+.|+..++.++.+..++.. ..+.++..+|.+++.. ++|.+|...|.+||++. ++.
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~--~eyrrA~~~y~qALq~~k~l~k~ 99 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHD--KEYRNAVSKYTMALQQKKALSKT 99 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcc--cHHHHHHHHHHHHHHHHHHHhcC
Confidence 4788889999999999999999998877643332 3466788899999999 99999999999998653 211
Q ss_pred ----------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 014213 119 ----------------------SKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVK 163 (429)
Q Consensus 119 ----------------------~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~ 163 (429)
....|++|.||..++++++|+..++..-. .-.++.+...|++++
T Consensus 100 ~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~-k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 100 SKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPS-RQRTPKINMLLANLY 165 (167)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCG-GGCCHHHHHHHHHHC
T ss_pred CCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCc-hhcCHHHHHHHHHHh
Confidence 25779999999999999999988663211 224666777777664
No 234
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.32 E-value=0.00064 Score=66.72 Aligned_cols=82 Identities=10% Similarity=-0.036 Sum_probs=66.7
Q ss_pred CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHH-Hhhc
Q 014213 100 EYPRAIHECNLALEVTPL--YSKALLKRARCYEAL-----NRLDLAFRDVTTVLNKEPKN-IMAAEIAERVKKEL-EKRG 170 (429)
Q Consensus 100 ~y~eAi~~~~~ALeldP~--~~kAl~~rA~ay~~L-----G~~deAl~~~~kAL~l~P~n-~~a~~~La~l~~~l-~e~~ 170 (429)
....|...+++|+++||+ +..+|.-+|..|..+ |+.+.|..+|++||.++|+. ..++...+.-+... ++..
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 468899999999999999 566999999999996 99999999999999999975 89988888876553 4444
Q ss_pred cccc--cccccCC
Q 014213 171 LRVN--DTVIELP 181 (429)
Q Consensus 171 ~a~~--e~~~~L~ 181 (429)
.+.. +++...+
T Consensus 258 ~a~~~L~kAL~a~ 270 (301)
T 3u64_A 258 GFDEALDRALAID 270 (301)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCC
Confidence 3333 5555555
No 235
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.97 E-value=0.0003 Score=72.86 Aligned_cols=134 Identities=10% Similarity=0.034 Sum_probs=104.3
Q ss_pred hhHHHHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHH-----------------------HHHHHHHH
Q 014213 37 DTEVFIGMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYL-----------------------RSNMAACY 93 (429)
Q Consensus 37 d~~~~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l-----------------------~~nrA~~y 93 (429)
+...+...+..+...|+.+++.|+|++|++.|.+|. +|........+ ...+..+|
T Consensus 140 eA~~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Y 217 (449)
T 1b89_A 140 AAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYY 217 (449)
T ss_dssp THHHHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHH
Confidence 344556777889999999999999999999999992 22100000111 12344788
Q ss_pred HHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH--HcCCHHHHHHHHHHHHHhCC-----CCHHHHHHHHHHHHHH
Q 014213 94 MQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYE--ALNRLDLAFRDVTTVLNKEP-----KNIMAAEIAERVKKEL 166 (429)
Q Consensus 94 ~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~--~LG~~deAl~~~~kAL~l~P-----~n~~a~~~La~l~~~l 166 (429)
.+. |.|++|+..++.+|.+++.+..++..+|.+|. ..++..++++.|...+.+.| .+...|..+.-++...
T Consensus 218 ek~--G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~~ 295 (449)
T 1b89_A 218 QDR--GYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKY 295 (449)
T ss_dssp HHT--TCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHHHT
T ss_pred HHC--CCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 888 99999999999999999999999999988885 45688899999988888888 7788888888888777
Q ss_pred Hhhccccc
Q 014213 167 EKRGLRVN 174 (429)
Q Consensus 167 ~e~~~a~~ 174 (429)
++...|+.
T Consensus 296 ~e~d~A~~ 303 (449)
T 1b89_A 296 EEYDNAII 303 (449)
T ss_dssp TCHHHHHH
T ss_pred chHHHHHH
Confidence 77665555
No 236
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.83 E-value=0.02 Score=57.76 Aligned_cols=104 Identities=13% Similarity=0.020 Sum_probs=86.5
Q ss_pred HhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc------c------------HHHHHHHHHHHHHHcCCCCHHH
Q 014213 42 IGMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI------D------------VSYLRSNMAACYMQMGLSEYPR 103 (429)
Q Consensus 42 l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~------~------------~a~l~~nrA~~y~kl~~g~y~e 103 (429)
+.....+...|......|+.+.|+..|.+|+.+.....- . +..+...++.+++.+ |++.+
T Consensus 112 ~~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~--g~~~~ 189 (388)
T 2ff4_A 112 LGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIAC--GRASA 189 (388)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHH
Confidence 345566777888888899999999999999998743211 0 123455677888888 99999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 014213 104 AIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLN 147 (429)
Q Consensus 104 Ai~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~ 147 (429)
|+..+..++..+|-+-.+|..+-.+|+..|+..+|+..|+++-.
T Consensus 190 a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 190 VIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988654
No 237
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=96.57 E-value=0.0066 Score=61.35 Aligned_cols=75 Identities=12% Similarity=0.010 Sum_probs=65.1
Q ss_pred HhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 014213 73 KLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKN 152 (429)
Q Consensus 73 el~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n 152 (429)
.++|.++ .+|.-++..++.. |++++|+..+++|+.++|. ..+|..+|.++...|++++|++.|.+|+.++|..
T Consensus 271 ~~~~~~a----~~~~alal~~l~~--gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 271 PELNNLS----IIYQIKAVSALVK--GKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp GGGTTCH----HHHHHHHHHHHHH--TCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred ccCCcCH----HHHHHHHHHHHhC--CCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 4456555 4777777777777 9999999999999999975 6788999999999999999999999999999987
Q ss_pred HH
Q 014213 153 IM 154 (429)
Q Consensus 153 ~~ 154 (429)
+.
T Consensus 344 ~t 345 (372)
T 3ly7_A 344 NT 345 (372)
T ss_dssp HH
T ss_pred Ch
Confidence 64
No 238
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.38 E-value=0.0083 Score=51.64 Aligned_cols=78 Identities=15% Similarity=0.060 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHcCCHHH---HHHHHHHHHHhC-CCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHH
Q 014213 46 QELKEEGNKLFQKRDHGG---ALLKYEKALKLL-PRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKA 121 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyee---Al~~Y~kALel~-P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kA 121 (429)
..-++.|-.+....+..+ ++..++..++.. | ...--+++.+|..|+++ |+|.+|+..|+..|+++|+|..|
T Consensus 36 ~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p---~~~Rd~lY~LAvg~ykl--g~Y~~A~~~~~~lL~~eP~n~QA 110 (126)
T 1nzn_A 36 STQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSK---EEQRDYVFYLAVGNYRL--KEYEKALKYVRGLLQTEPQNNQA 110 (126)
T ss_dssp HHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCH---HHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCc---chHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHhCCCCHHH
Confidence 345566777777777766 888888877754 3 12335788899999999 99999999999999999999988
Q ss_pred HHHHHHH
Q 014213 122 LLKRARC 128 (429)
Q Consensus 122 l~~rA~a 128 (429)
.-.+..+
T Consensus 111 ~~Lk~~i 117 (126)
T 1nzn_A 111 KELERLI 117 (126)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7665444
No 239
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.23 E-value=0.028 Score=61.05 Aligned_cols=82 Identities=12% Similarity=0.072 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH
Q 014213 61 HGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAI-HECNLALEVTPLYSKALLKRARCYEALNRLDLAF 139 (429)
Q Consensus 61 yeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi-~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl 139 (429)
.......|++||...|.++. +|...|..+... |+.++|+ ..+.+|+...|.+...|+..+..+...|+++.|.
T Consensus 325 ~~Rv~~~Ye~aL~~~p~~~~----lW~~ya~~~~~~--~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR 398 (679)
T 4e6h_A 325 KARMTYVYMQAAQHVCFAPE----IWFNMANYQGEK--NTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIE 398 (679)
T ss_dssp HHHHHHHHHHHHHHTTTCHH----HHHHHHHHHHHH--SCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHH----HHHHHHHHHHhc--CcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHH
Confidence 34567889999999999885 888888888887 8889997 9999999999999999999999999999999999
Q ss_pred HHHHHHHHh
Q 014213 140 RDVTTVLNK 148 (429)
Q Consensus 140 ~~~~kAL~l 148 (429)
..|++++..
T Consensus 399 ~iyek~l~~ 407 (679)
T 4e6h_A 399 TTILSCIDR 407 (679)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999975
No 240
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.00 E-value=0.065 Score=47.03 Aligned_cols=78 Identities=10% Similarity=-0.037 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHcCCHH---HHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 46 QELKEEGNKLFQKRDHG---GALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKAL 122 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdye---eAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl 122 (429)
+.-++.+-.+....+.. .++..++..++..|... -.+++.+|..|+++ |+|.+|+.+++..|+++|+|..|.
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~---RdcLYyLAvg~ykl--~~Y~~Ar~y~d~lL~~eP~n~QA~ 114 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRR---RECLYYLTIGCYKL--GEYSMAKRYVDTLFEHERNNKQVG 114 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTH---HHHHHHHHHHHHTT--TCHHHHHHHHHHHHHTCCCCHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccch---hHHHHHHHHHHHHh--hhHHHHHHHHHHHHhcCCCcHHHH
Confidence 34566677777776654 68899999999777532 35778899999999 999999999999999999998876
Q ss_pred HHHHHH
Q 014213 123 LKRARC 128 (429)
Q Consensus 123 ~~rA~a 128 (429)
-.+..+
T Consensus 115 ~Lk~~I 120 (144)
T 1y8m_A 115 ALKSMV 120 (144)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655443
No 241
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=95.95 E-value=0.036 Score=60.17 Aligned_cols=114 Identities=7% Similarity=-0.021 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHcCCHHHHH-HHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh-----------
Q 014213 47 ELKEEGNKLFQKRDHGGAL-LKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV----------- 114 (429)
Q Consensus 47 ~lk~~Gn~lf~~gdyeeAl-~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel----------- 114 (429)
-|..-+..+...|+.++|. ..|.+|+...|.+. .+|...+..+.+. |++++|...|++++..
T Consensus 345 lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~----~Lwl~~a~~ee~~--~~~e~aR~iyek~l~~l~~~~~~~~~~ 418 (679)
T 4e6h_A 345 IWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSA----VLAFSLSEQYELN--TKIPEIETTILSCIDRIHLDLAALMED 418 (679)
T ss_dssp HHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCH----HHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 3556677777888889997 99999999999876 4788888888888 9999999999999975
Q ss_pred CCC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHH
Q 014213 115 TPL-----------YSKALLKRARCYEALNRLDLAFRDVTTVLNK-EPKNIMAAEIAERVKKEL 166 (429)
Q Consensus 115 dP~-----------~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l-~P~n~~a~~~La~l~~~l 166 (429)
.|. ...+|...+......|..+.|...|.+|++. .+.....+...+.+...+
T Consensus 419 ~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~ 482 (679)
T 4e6h_A 419 DPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHI 482 (679)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTT
T ss_pred cCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHh
Confidence 253 4567888888888899999999999999987 434445555444444433
No 242
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=95.95 E-value=0.1 Score=46.34 Aligned_cols=106 Identities=10% Similarity=0.052 Sum_probs=85.0
Q ss_pred HHHHHHHHHHcCCH------HHHHHHHHHHHHhCCCCCc----cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCC
Q 014213 48 LKEEGNKLFQKRDH------GGALLKYEKALKLLPRNHI----DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPL 117 (429)
Q Consensus 48 lk~~Gn~lf~~gdy------eeAl~~Y~kALel~P~~~~----~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~ 117 (429)
|..-...+=+.|+. +.-++.|++|+...|.... ..+.+|.+.|. +..+ ++.++|...|+.++.+...
T Consensus 16 W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~-~~ei--~D~d~aR~vy~~a~~~hKk 92 (161)
T 4h7y_A 16 WLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAE-LKAI--QEPDDARDYFQMARANCKK 92 (161)
T ss_dssp HHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHH-HHHH--HCGGGCHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHH-HHHh--cCHHHHHHHHHHHHHHhHH
Confidence 33333444444777 8888999999999986431 23567776664 4677 8999999999999999889
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 118 YSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAA 156 (429)
Q Consensus 118 ~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~ 156 (429)
+++.|...|.--...|+...|...+.+|+.+.|...+.+
T Consensus 93 FAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~l 131 (161)
T 4h7y_A 93 FAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML 131 (161)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHH
Confidence 999999999999999999999999999999999876543
No 243
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=95.84 E-value=0.059 Score=46.74 Aligned_cols=79 Identities=10% Similarity=-0.065 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHH
Q 014213 46 QELKEEGNKLFQKRDH---GGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKAL 122 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdy---eeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl 122 (429)
+.-++.+-.+.+..+. ..++..++..++..|.. +--+++.+|..|.++ |+|.+|+..++.+|+++|+|..|.
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~---~Rd~LYyLAvg~ykl--gdY~~Ar~y~d~lL~~eP~N~QA~ 115 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR---RRECLYYLTIGCYKL--GEYSMAKRYVDTLFEHERNNKQVG 115 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGG---HHHHHHHHHHHHHHH--TCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcch---hHHHHHHHHHHHHHh--hhHHHHHHHHHHHHhhCCCCHHHH
Confidence 3455666677776655 46899999999877632 235788899999999 999999999999999999999987
Q ss_pred HHHHHHH
Q 014213 123 LKRARCY 129 (429)
Q Consensus 123 ~~rA~ay 129 (429)
-.+..+-
T Consensus 116 ~Lk~~Ie 122 (134)
T 3o48_A 116 ALKSMVE 122 (134)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655443
No 244
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.41 E-value=0.052 Score=48.82 Aligned_cols=84 Identities=20% Similarity=0.205 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCCCc------------------cHHHHHHHHHHHHHHcCCCCH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLL---PRNHI------------------DVSYLRSNMAACYMQMGLSEY 101 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~---P~~~~------------------~~a~l~~nrA~~y~kl~~g~y 101 (429)
..++.+.-.|+.+|..++|..|...|.+||.+. +++.. .-.-+.+.+|.||+++ +++
T Consensus 61 ~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l--~~~ 138 (167)
T 3ffl_A 61 QKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVL--KQD 138 (167)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHT--TCH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHH--CCH
Confidence 456778899999999999999999999997653 22221 0124778899999999 999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 014213 102 PRAIHECNLALEVTPLYSKALLKRARCY 129 (429)
Q Consensus 102 ~eAi~~~~~ALeldP~~~kAl~~rA~ay 129 (429)
.+||..++.. -..-..++.-+.+|..|
T Consensus 139 ~~Ai~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 139 KDAIAILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred HHHHHHHhcC-CchhcCHHHHHHHHHHh
Confidence 9999886432 22234567666666655
No 245
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.37 E-value=0.1 Score=57.23 Aligned_cols=59 Identities=15% Similarity=0.164 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 014213 85 LRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTV 145 (429)
Q Consensus 85 l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kA 145 (429)
++.--+.-++.. ++|+-|+..+.+|+.+.|.....|++++.||..+|+|+.||-.++-+
T Consensus 339 LL~~Qa~FLl~K--~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNR--GDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhcc--CcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 444445545555 99999999999999999999999999999999999999999665543
No 246
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=94.24 E-value=0.68 Score=47.76 Aligned_cols=117 Identities=9% Similarity=-0.073 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccH------------------------------------HHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDV------------------------------------SYLRSNM 89 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~------------------------------------a~l~~nr 89 (429)
..|..-+..+...|+.+.|...|++|+.. |.+.... ..+|...
T Consensus 214 ~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y 292 (493)
T 2uy1_A 214 EVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINH 292 (493)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHH
Confidence 34667788888899999999999999999 9875310 0112222
Q ss_pred HHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 014213 90 AACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALN-RLDLAFRDVTTVLNKEPKNIMAAEIAERVKKEL 166 (429)
Q Consensus 90 A~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG-~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l 166 (429)
+..+.+. +..+.|...|.+| ...+.....|...|..-..++ +++.|...|+.+++.-|+++..+.........+
T Consensus 293 ~~~~~r~--~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~ 367 (493)
T 2uy1_A 293 LNYVLKK--RGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRI 367 (493)
T ss_dssp HHHHHHH--HCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHc--CCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc
Confidence 2222234 5677788888888 333334556666665555555 588888888888888888776655444433333
No 247
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.96 E-value=0.47 Score=45.80 Aligned_cols=63 Identities=16% Similarity=0.152 Sum_probs=52.6
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHH
Q 014213 53 NKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKA 121 (429)
Q Consensus 53 n~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kA 121 (429)
..+++.|+.++|+......|+..|.|...+ ..+...+.-. |+|++|...++.+.+++|.....
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R----~~LfqLLcv~--G~w~RA~~QL~~~a~l~p~~~~~ 67 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLR----SSFIELLCID--GDFERADEQLMQSIKLFPEYLPG 67 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHH----HHHHHHHHHH--TCHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHH----HHHHHHHHhc--CCHHHHHHHHHHHHHhCchhhHH
Confidence 467899999999999999999999998644 4444444445 99999999999999999998664
No 248
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.61 E-value=0.38 Score=50.26 Aligned_cols=80 Identities=6% Similarity=-0.122 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 014213 85 LRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKK 164 (429)
Q Consensus 85 l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~ 164 (429)
++.++|...... ..+..|..+|.+|+.+.|.+..+|..+|......|+.-+|+-+|-++|......+.+..++..+..
T Consensus 154 ~l~~LGDL~RY~--~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 154 CLVHLGDIARYR--NQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHcccHHHHH--HHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 444556555555 678999999999999999999999999999999999999999999999988889999999998877
Q ss_pred HH
Q 014213 165 EL 166 (429)
Q Consensus 165 ~l 166 (429)
..
T Consensus 232 ~~ 233 (497)
T 1ya0_A 232 KA 233 (497)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 249
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=93.09 E-value=1.3 Score=44.75 Aligned_cols=97 Identities=13% Similarity=0.026 Sum_probs=75.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC--CCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC---CCCH--HHH
Q 014213 50 EEGNKLFQKRDHGGALLKYEKALKLLPR--NHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVT---PLYS--KAL 122 (429)
Q Consensus 50 ~~Gn~lf~~gdyeeAl~~Y~kALel~P~--~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld---P~~~--kAl 122 (429)
..|..|+..|+|.+|+..+.+.++.... +.....-++......|+.+ +++.++...++.|.... +.++ .+.
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~--~n~~k~k~~l~~a~~~~~ai~~~p~i~a~ 181 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHAL--SNLPKARAALTSARTTANAIYCPPKVQGA 181 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHhhhccCCCCHHHHHH
Confidence 4799999999999999999999886554 2223445677788889999 99999999999987653 2233 333
Q ss_pred --HHHHHHHH-HcCCHHHHHHHHHHHHHh
Q 014213 123 --LKRARCYE-ALNRLDLAFRDVTTVLNK 148 (429)
Q Consensus 123 --~~rA~ay~-~LG~~deAl~~~~kAL~l 148 (429)
..-|..+. ..++|..|..+|-.++.-
T Consensus 182 i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 182 LDLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 33478888 799999999999998743
No 250
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.02 E-value=0.22 Score=54.73 Aligned_cols=57 Identities=25% Similarity=0.242 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 014213 47 ELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECN 109 (429)
Q Consensus 47 ~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~ 109 (429)
-|..++..+..+|+|+-|+.+..+|+...|.+.. .|..+|.||..+ |+|+.|+-.++
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~----tW~~La~vYi~l--~d~e~ALLtLN 395 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFE----SWYNLARCHIKK--EEYEKALFAIN 395 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHH----HHHHHHHHHHHT--TCHHHHHHHHH
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhH----HHHHHHHHHHHh--ccHHHHHHHHh
Confidence 4666788889999999999999999999999885 999999999999 99999995443
No 251
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=92.27 E-value=3.4 Score=42.66 Aligned_cols=106 Identities=9% Similarity=0.020 Sum_probs=82.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCC-CCHHHHHH
Q 014213 48 LKEEGNKLFQKRDHGGALLKYEKALKLL--PRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTP-LYSKALLK 124 (429)
Q Consensus 48 lk~~Gn~lf~~gdyeeAl~~Y~kALel~--P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP-~~~kAl~~ 124 (429)
|...-..|.+.|++++|+..|++..+.. |+ . ..|+.+-.+|.+. |++++|...++...+..- -+...|..
T Consensus 108 yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd-~----~tyn~lI~~~~~~--g~~~~A~~l~~~M~~~G~~Pd~~ty~~ 180 (501)
T 4g26_A 108 FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPR-L----RSYGPALFGFCRK--GDADKAYEVDAHMVESEVVPEEPELAA 180 (501)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC-H----HHHHHHHHHHHHT--TCHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCc-c----ceehHHHHHHHHC--CCHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 4555678889999999999999987752 32 2 3677777888888 999999999999887542 25678888
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHH
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNK--EPKNIMAAEIAER 161 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l--~P~n~~a~~~La~ 161 (429)
+-.+|...|++++|++.|++.-.. .|+... ...+..
T Consensus 181 Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~T-~~~l~~ 218 (501)
T 4g26_A 181 LLKVSMDTKNADKVYKTLQRLRDLVRQVSKST-FDMIEE 218 (501)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHTSSBCHHH-HHHHHH
T ss_pred HHHHHhhCCCHHHHHHHHHHHHHhCCCcCHHH-HHHHHH
Confidence 999999999999999999987654 665444 344433
No 252
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=91.64 E-value=0.88 Score=47.49 Aligned_cols=79 Identities=15% Similarity=0.083 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 014213 47 ELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRA 126 (429)
Q Consensus 47 ~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA 126 (429)
-+...|+...-...+..|..+|.+|+.+.|.+.. .|+.+|..+... +++-+|+-.|.++|.....+..|.-++.
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~----~~nqLavla~~~--~~~l~a~y~y~rsl~~~~Pf~~a~~nL~ 227 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQ----PYNQLAILASSK--GDHLTTIFYYCRSIAVKFPFPAASTNLQ 227 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSH----HHHHHHHHHHHT--TCHHHHHHHHHHHHSSSBCCHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCc----hHHHHHHHHhcc--cccHHHHHHHHHHHhcCCCChhHHHHHH
Confidence 4678899999999999999999999999999985 999999999988 9999999999999998888999999888
Q ss_pred HHHHH
Q 014213 127 RCYEA 131 (429)
Q Consensus 127 ~ay~~ 131 (429)
..+..
T Consensus 228 ~~f~~ 232 (497)
T 1ya0_A 228 KALSK 232 (497)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 253
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.37 E-value=1 Score=45.74 Aligned_cols=99 Identities=10% Similarity=-0.082 Sum_probs=76.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC---CCCH---HH
Q 014213 48 LKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVT---PLYS---KA 121 (429)
Q Consensus 48 lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld---P~~~---kA 121 (429)
+..+|..|+..|+++.|+..|.++........ ....++.+...+++.. ++|..+...+.+|..+- +++. +.
T Consensus 134 ~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~-~kid~~l~~irl~l~~--~d~~~~~~~~~ka~~~~~~~~d~~~~~~l 210 (429)
T 4b4t_R 134 WINLGEYYAQIGDKDNAEKTLGKSLSKAISTG-AKIDVMLTIARLGFFY--NDQLYVKEKLEAVNSMIEKGGDWERRNRY 210 (429)
T ss_dssp CHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCC-SHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHTTCCCTHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCChH-HHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHhhhcCCCHHHHHHH
Confidence 55899999999999999999999998876544 3445666666777777 99999999999987652 3321 23
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 014213 122 LLKRARCYEALNRLDLAFRDVTTVLNKE 149 (429)
Q Consensus 122 l~~rA~ay~~LG~~deAl~~~~kAL~l~ 149 (429)
....|.++...++|..|...|..++.-.
T Consensus 211 k~~~gl~~l~~r~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 211 KTYYGIHCLAVRNFKEAAKLLVDSLATF 238 (429)
T ss_dssp HHHHHHGGGGTSCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHhccC
Confidence 3444777888999999999998887653
No 254
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=89.53 E-value=5 Score=36.55 Aligned_cols=95 Identities=16% Similarity=0.080 Sum_probs=72.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--hC------------
Q 014213 50 EEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALE--VT------------ 115 (429)
Q Consensus 50 ~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALe--ld------------ 115 (429)
..+..+|-.|.|..|+..... .+. .+..+.-+.||.++ .+|..|+...+..|+ ++
T Consensus 38 L~~I~LyyngEY~R~Lf~L~~------lNT---~Ts~YYk~LCy~kl--KdYkkA~~~le~il~~kvd~d~~~d~~~~~f 106 (242)
T 3kae_A 38 LMSIVLYLNGEYTRALFHLHK------LNT---CTSKYYESLCYKKK--KDYKKAIKSLESILEGKVERDPDVDARIQEM 106 (242)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT------CCB---HHHHHHHHHHHHHT--TCHHHHHHHHHHHHTTCSBCCCCCCHHHHTT
T ss_pred hhhhhhhhcchHhHHHHHHHh------cch---HHHHHHHHHHHHHH--HHHHHHHHHHHHHHhcccccCccccccccee
Confidence 457888889999888876532 222 24455678999999 999999999999982 22
Q ss_pred ---CCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 014213 116 ---PLYSK-ALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMA 155 (429)
Q Consensus 116 ---P~~~k-Al~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a 155 (429)
|.+-. .+..+|..+..+|+.++|+.+|.+.....|--+.+
T Consensus 107 fvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~v 150 (242)
T 3kae_A 107 FVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPV 150 (242)
T ss_dssp SCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHH
T ss_pred eeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchH
Confidence 33433 45667999999999999999999999998865543
No 255
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=89.44 E-value=3.2 Score=42.66 Aligned_cols=111 Identities=7% Similarity=-0.210 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLS-EYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g-~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
..|..-+..+.+.++.+.|...|.+| ..|... ..+|...|..-..+ + +++.|...|+.+++..|+.+..+..
T Consensus 287 ~lw~~y~~~~~r~~~~~~AR~i~~~A--~~~~~~---~~v~i~~A~lE~~~--~~d~~~ar~ife~al~~~~~~~~~~~~ 359 (493)
T 2uy1_A 287 LLRINHLNYVLKKRGLELFRKLFIEL--GNEGVG---PHVFIYCAFIEYYA--TGSRATPYNIFSSGLLKHPDSTLLKEE 359 (493)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHH--TTSCCC---HHHHHHHHHHHHHH--HCCSHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh--hCCCCC---hHHHHHHHHHHHHH--CCChHHHHHHHHHHHHHCCCCHHHHHH
Confidence 34555566666677899999999999 445422 23555556555555 4 6999999999999999999888888
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 014213 125 RARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELE 167 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~ 167 (429)
.+.-...+|+.+.|...|+++ +.....+..........|
T Consensus 360 yid~e~~~~~~~~aR~l~er~----~k~~~lw~~~~~fE~~~G 398 (493)
T 2uy1_A 360 FFLFLLRIGDEENARALFKRL----EKTSRMWDSMIEYEFMVG 398 (493)
T ss_dssp HHHHHHHHTCHHHHHHHHHHS----CCBHHHHHHHHHHHHHHS
T ss_pred HHHHHHHcCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHCC
Confidence 888888999999999999987 344555555555544443
No 256
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=87.33 E-value=6.3 Score=40.64 Aligned_cols=101 Identities=8% Similarity=-0.019 Sum_probs=76.0
Q ss_pred CHHHHHHHHHHHHHhC--CCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHH
Q 014213 60 DHGGALLKYEKALKLL--PRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVT-PLYSKALLKRARCYEALNRLD 136 (429)
Q Consensus 60 dyeeAl~~Y~kALel~--P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld-P~~~kAl~~rA~ay~~LG~~d 136 (429)
+.+.|+..|++..... |+ . ..|+.+-.+|.+. |++++|+..+++..+.. .-+...|..+-.+|...|+++
T Consensus 85 ~l~~A~~lf~~M~~~G~~Pd-~----~tyn~lI~~~~~~--g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~ 157 (501)
T 4g26_A 85 GLSRGFDIFKQMIVDKVVPN-E----ATFTNGARLAVAK--DDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDAD 157 (501)
T ss_dssp HHHHHHHHHHHHHHTTCCCC-H----HHHHHHHHHHHHH--TCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCCC-H----HHHHHHHHHHHhc--CCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHH
Confidence 4688888998877643 32 2 4778888899999 99999999999887753 236778888889999999999
Q ss_pred HHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHh
Q 014213 137 LAFRDVTTVLNK--EPKNIMAAEIAERVKKELEK 168 (429)
Q Consensus 137 eAl~~~~kAL~l--~P~n~~a~~~La~l~~~l~e 168 (429)
+|+..|+..... .|+. ..+..+-.++...++
T Consensus 158 ~A~~l~~~M~~~G~~Pd~-~ty~~Li~~~~~~g~ 190 (501)
T 4g26_A 158 KAYEVDAHMVESEVVPEE-PELAALLKVSMDTKN 190 (501)
T ss_dssp HHHHHHHHHHHTTCCCCH-HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCCCCCH-HHHHHHHHHHhhCCC
Confidence 999999998865 5544 444444444444443
No 257
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=86.33 E-value=3.2 Score=39.93 Aligned_cols=61 Identities=10% Similarity=0.003 Sum_probs=56.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 014213 99 SEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIA 159 (429)
Q Consensus 99 g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~L 159 (429)
|+..+|+..+...++.+|.+...-..+.+.|+-.|+|+.|+.-++-+.+++|........+
T Consensus 11 g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~y 71 (273)
T 1zbp_A 11 GQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQL 71 (273)
T ss_dssp TCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999876654443
No 258
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=86.08 E-value=2.4 Score=42.34 Aligned_cols=62 Identities=8% Similarity=0.015 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLAL 112 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~AL 112 (429)
...+...+..++..|+|.+|+..+..++..+|-+.. +|..+..+|... |+..+|+..|+++-
T Consensus 171 ~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~----~~~~lm~al~~~--Gr~~~Al~~y~~~r 232 (388)
T 2ff4_A 171 VLAHTAKAEAEIACGRASAVIAELEALTFEHPYREP----LWTQLITAYYLS--DRQSDALGAYRRVK 232 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH----HHHHHHHHHHTT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHH----HHHHHHHHHHHc--CCHHHHHHHHHHHH
Confidence 344556778889999999999999999999998874 888888999999 99999999988763
No 259
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=84.76 E-value=17 Score=36.85 Aligned_cols=104 Identities=7% Similarity=-0.112 Sum_probs=76.2
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc--cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH---hCCC
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI--DVSYLRSNMAACYMQMGLSEYPRAIHECNLALE---VTPL 117 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~--~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALe---ldP~ 117 (429)
.+|.-....+..++..|+|.+|...+.....-.-.... ...-++......|+.. ++|.+|...++++.. -.+.
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~--~d~~~a~~~~~ki~~~~~~~~~ 212 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILK--GDYSQATVLSRKILKKTFKNPK 212 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHhhcccCC
Confidence 35556677899999999999999999887643322211 2344556666777777 999999999998742 2333
Q ss_pred CH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 118 YS----KALLKRARCYEALNRLDLAFRDVTTVLNK 148 (429)
Q Consensus 118 ~~----kAl~~rA~ay~~LG~~deAl~~~~kAL~l 148 (429)
++ ..+...|..+...++|.+|..+|..++..
T Consensus 213 ~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 213 YESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 33 34556688889999999999999999864
No 260
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=84.76 E-value=1.9 Score=34.02 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=32.3
Q ss_pred HHHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 014213 40 VFIGMSQELKEEGNKLFQKRDHGGALLKYEKALKLL 75 (429)
Q Consensus 40 ~~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~ 75 (429)
.++..|..+..+|..+=+.|+|++|+.+|..||+..
T Consensus 14 ~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l 49 (83)
T 2w2u_A 14 MLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVL 49 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 467999999999999999999999999999988863
No 261
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=84.50 E-value=10 Score=39.93 Aligned_cols=27 Identities=15% Similarity=0.210 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKA 71 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kA 71 (429)
...|++.|..+.+.++++.|..+|.++
T Consensus 681 ~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 681 EMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 345788888888888888888888875
No 262
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=83.48 E-value=1.9 Score=33.85 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=30.6
Q ss_pred HHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 41 FIGMSQELKEEGNKLFQKRDHGGALLKYEKALKL 74 (429)
Q Consensus 41 ~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel 74 (429)
++..|..+..+|..+=+.|+|++|+.+|..||+.
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 6788899999999999999999999999988875
No 263
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=80.42 E-value=2.8 Score=33.63 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=31.0
Q ss_pred HHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 014213 41 FIGMSQELKEEGNKLFQKRDHGGALLKYEKALKLL 75 (429)
Q Consensus 41 ~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~ 75 (429)
++..|..+...|..+=..|+|++|+.+|..||++.
T Consensus 11 ~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l 45 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGIDML 45 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 56788889999999999999999999999988863
No 264
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=80.05 E-value=6 Score=41.71 Aligned_cols=26 Identities=15% Similarity=0.096 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 014213 84 YLRSNMAACYMQMGLSEYPRAIHECNLA 111 (429)
Q Consensus 84 ~l~~nrA~~y~kl~~g~y~eAi~~~~~A 111 (429)
..|.++|..+++. ++++.|+..|.++
T Consensus 682 ~~W~~la~~al~~--~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 682 MKWRALGDASLQR--FNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHT--TCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHc--CCHHHHHHHHHHc
Confidence 4888999999998 9999999988875
No 265
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=79.98 E-value=3.1 Score=34.96 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=29.4
Q ss_pred HHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 41 FIGMSQELKEEGNKLFQKRDHGGALLKYEKALKL 74 (429)
Q Consensus 41 ~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel 74 (429)
++..|..+..+|..+=..|+|++|+.+|..||++
T Consensus 14 ~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 14 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 6788888999999888999999999999888774
No 266
>1wjn_A Tubulin-folding protein TBCE; ubiquitin-like domain, progressive motor neuropathy, structural genomics; NMR {Mus musculus} SCOP: d.15.1.1
Probab=79.84 E-value=2.7 Score=33.49 Aligned_cols=79 Identities=16% Similarity=0.191 Sum_probs=50.7
Q ss_pred ceeEEEEe----CCceEEEEccCCccHHHHHHHHHhhCC-CCCceEEEEECCC-CCEEE-ecChHHHHHHHHhhccCCcE
Q 014213 261 KKTVKLVF----GEDIRVAQLPLNSSLLQLREVISDRFP-SCRAVLIKYRDEE-GDLVT-ITTDEELRWAEASAEMQGSV 333 (429)
Q Consensus 261 ~~~vK~~~----~~DiR~~~i~~~~~~~~L~~~v~~kf~-~~~~~~iky~Ded-gDlit-i~~~~dl~~a~~~~~~~~~~ 333 (429)
.++|.|++ ..+..-..+|.+.++.+|..+|...|+ .....+|.|.|++ +..+. +.+|+-- +.......-.
T Consensus 9 ~v~l~I~~~~~~~~~~~e~~l~~~~TV~~LK~~i~~~~gip~~~q~L~~~~~~~~~~~~~L~~d~~~---L~~y~i~~G~ 85 (97)
T 1wjn_A 9 LLTLKIKCSNQPERQILEKQLPDSMTVQKVKGLLSRLLKVPVSELLLSYESSKMPGREIELENDLQP---LQFYSVENGD 85 (97)
T ss_dssp EEEEEEEESSCSSSCCEEEEEETTSBHHHHHHHHHTTTTCCTTTCEEEEECTTSCSCEEECCCSSSB---SGGGTCCTTC
T ss_pred cEEEEEEecCCCCCcEEEEECCCCCCHHHHHHHHHHHHCCChhHeEEEEEcCCCCceeeccCCCccc---HhhcCCCCCC
Confidence 35555543 445666779999999999999999995 3466999999854 33333 4444321 2222222337
Q ss_pred EEEEEeeCC
Q 014213 334 RLFVVGVNP 342 (429)
Q Consensus 334 rl~v~e~~~ 342 (429)
+|+|.+-+|
T Consensus 86 ~I~V~d~~p 94 (97)
T 1wjn_A 86 CLLVRWSGP 94 (97)
T ss_dssp EEEEECCSS
T ss_pred EEEEEecCC
Confidence 888887554
No 267
>4b6w_A Tubulin-specific chaperone; CAP-Gly, ubiquitin-like; HET: MSE; 2.35A {Trypanosoma brucei brucei strain 927}
Probab=79.54 E-value=3.7 Score=32.27 Aligned_cols=66 Identities=12% Similarity=0.223 Sum_probs=49.0
Q ss_pred EEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEEEecChHHHHHHHHhhccCCcEEEEEEeeCC
Q 014213 275 AQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLVTITTDEELRWAEASAEMQGSVRLFVVGVNP 342 (429)
Q Consensus 275 ~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDliti~~~~dl~~a~~~~~~~~~~rl~v~e~~~ 342 (429)
..++.+.++.+|.++|..+++. ...-+|-|+|.+|.++---.+|+- -++...-..-.+|+|++..|
T Consensus 19 ~r~~~s~TI~~lK~ki~~~~Gip~~~QrLi~~~~~~~~~g~~l~d~~--tL~~Y~i~~g~~ihlvd~~P 85 (86)
T 4b6w_A 19 KRYGLAQTIESIKENVFTHFATPPEYMQLQLIDDRGITIEKNMANDK--QLGYYQCRDEFVIHVVDLQP 85 (86)
T ss_dssp EEEETTSBHHHHHHHHHTTSCCCGGGEEEEEECTTSCEEESSCCTTS--BGGGGTCCTTCEEEEEECCC
T ss_pred EEcCccCcHHHHHHHHHHHHCCCHHHEEEEEecCCCCceeeEcCCCC--CHHHCCCCCCCEEEEEeCCC
Confidence 3379999999999999999964 355899999999988766555553 23333434448899988776
No 268
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.01 E-value=9.8 Score=43.31 Aligned_cols=93 Identities=12% Similarity=0.008 Sum_probs=69.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCC-------------------ccHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 014213 49 KEEGNKLFQKRDHGGALLKYEKALKLLPRNH-------------------IDVSYLRSNMAACYMQMGLSEYPRAIHECN 109 (429)
Q Consensus 49 k~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~-------------------~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~ 109 (429)
+-.|..++..|++++|..+|.+|-.-...+. ...+.+|......+.+. +.++.++..+.
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~--~~~~~vi~fa~ 923 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEE--SAYIDALEFSL 923 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHT--SCCHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHc--CCHHHHHHHHH
Confidence 5689999999999999999988743221110 01234566677777777 99999999999
Q ss_pred HHHHhCC-CCHH----HHHHHHHHHHHcCCHHHHHHHHH
Q 014213 110 LALEVTP-LYSK----ALLKRARCYEALNRLDLAFRDVT 143 (429)
Q Consensus 110 ~ALeldP-~~~k----Al~~rA~ay~~LG~~deAl~~~~ 143 (429)
.||+..+ +... .|.++-.++..+|+|++|...+.
T Consensus 924 lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 924 LADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALM 962 (1139)
T ss_dssp HHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHH
T ss_pred HHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 9998764 3332 57788899999999999976664
No 269
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=78.62 E-value=3.6 Score=32.20 Aligned_cols=34 Identities=21% Similarity=0.202 Sum_probs=30.4
Q ss_pred HHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 41 FIGMSQELKEEGNKLFQKRDHGGALLKYEKALKL 74 (429)
Q Consensus 41 ~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel 74 (429)
++..|..+..+|...=..|+|++|+.+|..|+++
T Consensus 9 ~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 9 FLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 5678888999999999999999999999999885
No 270
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=76.65 E-value=37 Score=30.35 Aligned_cols=81 Identities=9% Similarity=-0.040 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLK 124 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~ 124 (429)
...|+..|..++..|+++-|..+|.++ .+. ..+...|.-. |+-+.-....+.|....- +..
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~~-----~D~-------~~L~~Ly~~t--g~~e~L~kla~iA~~~g~-----~n~ 94 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQTQ-----HSF-------DKLSFLYLVT--GDVNKLSKMQNIAQTRED-----FGS 94 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHT-----TCH-------HHHHHHHHHH--TCHHHHHHHHHHHHHTTC-----HHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHh-----CCH-------HHHHHHHHHh--CCHHHHHHHHHHHHHCcc-----HHH
Confidence 345777777777777777777777653 121 1233344444 555554444444433321 222
Q ss_pred HHHHHHHcCCHHHHHHHHHH
Q 014213 125 RARCYEALNRLDLAFRDVTT 144 (429)
Q Consensus 125 rA~ay~~LG~~deAl~~~~k 144 (429)
...++..+|+++++++.|.+
T Consensus 95 af~~~l~lGdv~~~i~lL~~ 114 (177)
T 3mkq_B 95 MLLNTFYNNSTKERSSIFAE 114 (177)
T ss_dssp HHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHH
Confidence 34566677777777776654
No 271
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=75.49 E-value=47 Score=32.56 Aligned_cols=118 Identities=15% Similarity=0.168 Sum_probs=67.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCc----cH-------HHHHHHHHHHHHHcCCCC-----HHHHHHHHHHH
Q 014213 48 LKEEGNKLFQKRDHGGALLKYEKALKLLPRNHI----DV-------SYLRSNMAACYMQMGLSE-----YPRAIHECNLA 111 (429)
Q Consensus 48 lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~----~~-------a~l~~nrA~~y~kl~~g~-----y~eAi~~~~~A 111 (429)
....|..++..|+|++|+..|..+|...|-... +. ..+....-.+-+.+.... .+.....++.|
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 457899999999999999999999998863211 11 111111111112220011 12222222222
Q ss_pred H-----HhCCCCHHHHHHHHH-HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 014213 112 L-----EVTPLYSKALLKRAR-CYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKEL 166 (429)
Q Consensus 112 L-----eldP~~~kAl~~rA~-ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l 166 (429)
. .+.|.+.-.-++.|. ..+..++|.-|....++.|++.|+ +........+....
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~-~~~~~qArkil~~c 244 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPK-PEVAQQTRKILSAC 244 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCC-HHHHHHHHHHHHHH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHH
Confidence 1 234544444444454 567889999999999999999886 44334444444433
No 272
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=75.48 E-value=2.9 Score=37.12 Aligned_cols=86 Identities=13% Similarity=0.028 Sum_probs=58.0
Q ss_pred HhCCCCCccHHHHHHHHHHHHHHcCCCCH------HHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHcCCHHHH
Q 014213 73 KLLPRNHIDVSYLRSNMAACYMQMGLSEY------PRAIHECNLALEVTPL--------YSKALLKRARCYEALNRLDLA 138 (429)
Q Consensus 73 el~P~~~~~~a~l~~nrA~~y~kl~~g~y------~eAi~~~~~ALeldP~--------~~kAl~~rA~ay~~LG~~deA 138 (429)
-+.|++++ .|.+.....-+- |+. ++.+..|++|+..-|. |+..|.+.|. +..+++.++|
T Consensus 7 ~~~p~~yd----~W~~yl~llE~~--g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~-~~ei~D~d~a 79 (161)
T 4h7y_A 7 MMMANNPE----DWLSLLLKLEKN--SVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAE-LKAIQEPDDA 79 (161)
T ss_dssp ---CCSHH----HHHHHHHHHHHH--TCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHH-HHHHHCGGGC
T ss_pred eeCCCCHH----HHHHHHHHHHHc--CCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHH-HHHhcCHHHH
Confidence 45677775 444444444444 777 8888999999987764 4556666674 4677999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 014213 139 FRDVTTVLNKEPKNIMAAEIAERVKKE 165 (429)
Q Consensus 139 l~~~~kAL~l~P~n~~a~~~La~l~~~ 165 (429)
.+.|+.|+++....+-+|...++-.-+
T Consensus 80 R~vy~~a~~~hKkFAKiwi~~AqFEiR 106 (161)
T 4h7y_A 80 RDYFQMARANCKKFAFVHISFAQFELS 106 (161)
T ss_dssp HHHHHHHHHHCTTBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999966664455544443333
No 273
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=72.72 E-value=72 Score=31.28 Aligned_cols=106 Identities=16% Similarity=0.002 Sum_probs=61.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----CccHHHHH--HHHHHHHHHcCCCCHHHHH-----HHHHHHHH---
Q 014213 48 LKEEGNKLFQKRDHGGALLKYEKALKLLPRN----HIDVSYLR--SNMAACYMQMGLSEYPRAI-----HECNLALE--- 113 (429)
Q Consensus 48 lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~----~~~~a~l~--~nrA~~y~kl~~g~y~eAi-----~~~~~ALe--- 113 (429)
....|..++..|+|++|+..|..+|...|-. ..+...+. ..++.-|.-- =..+-+. .+-.+.++
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYila--l~iEl~Rr~l~~~~~kR~lELAA 194 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILG--LSIELERRSLKEGNTVRMLELAA 194 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHH--HHHHHHHHTCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhcCcccHHHHHHHHH
Confidence 4558999999999999999999999987632 22211111 1111111100 0001111 01122222
Q ss_pred ------hCCCCHHHHHHHHH-HHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 014213 114 ------VTPLYSKALLKRAR-CYEALNRLDLAFRDVTTVLNKEPKNIMA 155 (429)
Q Consensus 114 ------ldP~~~kAl~~rA~-ay~~LG~~deAl~~~~kAL~l~P~n~~a 155 (429)
+.|.+.-.-++.|. ..+..++|.-|....++.|++.|+...+
T Consensus 195 YFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a 243 (325)
T 3mv2_A 195 YFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRA 243 (325)
T ss_dssp HGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHH
T ss_pred HhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHH
Confidence 23444333344443 5678999999999999999999975543
No 274
>2jxx_A Nfatc2-interacting protein; nuclear factor of activated T-cells, cytoplasmic 2- interacting protein, ubiquitin like homologue; NMR {Homo sapiens}
Probab=69.89 E-value=12 Score=30.35 Aligned_cols=62 Identities=13% Similarity=0.102 Sum_probs=46.0
Q ss_pred CCCceeEEEEeCC--ceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEEEecCh-HHHHH
Q 014213 258 NEPKKTVKLVFGE--DIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLVTITTD-EELRW 322 (429)
Q Consensus 258 ~~~~~~vK~~~~~--DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDliti~~~-~dl~~ 322 (429)
....++|||.-.+ ...+|.|-.+..|.-|++...++... .+.+++.| ||+.|.=.++ +||.|
T Consensus 22 ~~~~I~LkV~~~dg~~~v~fkIk~~t~l~kLm~aY~~~~g~~~~~vrF~F---DG~rI~~~~TP~dLdM 87 (97)
T 2jxx_A 22 TSQQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGRKLSFFF---DGTKLSGRELPADLGM 87 (97)
T ss_dssp SCSEEEEEEEESSSSCEEEEEEETTSCHHHHHHHHHHHTTCSSSCCEEEE---TTEECCSCSCHHHHTC
T ss_pred CCCeEEEEEEcCCCCEEEEEEECCCChHHHHHHHHHHHHCCCcccEEEEE---CCEEcCCCCCHHHcCC
Confidence 4577899998533 24567789999999999999999953 35577777 7988876544 66644
No 275
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=69.51 E-value=7.3 Score=40.87 Aligned_cols=68 Identities=12% Similarity=0.047 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 014213 82 VSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPL-------YSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNI 153 (429)
Q Consensus 82 ~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~-------~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~ 153 (429)
.+++++.+=..|+.- +.|+.|.....++. .|. ....+|..|.++...++|.+|.+++..|+...|.+.
T Consensus 230 qa~l~nllLRnYL~~--~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 230 KAMLINLILRDFLNN--GEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HHHHHHHHHHHHHHS--SCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred hHHHHHHHHHHHHcc--CcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 477888888889998 99999999999984 332 256788899999999999999999999999888654
No 276
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=69.10 E-value=7.1 Score=30.82 Aligned_cols=32 Identities=16% Similarity=0.203 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKL 74 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel 74 (429)
..|..+..+|..+=..|+|++|+.+|..||++
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34667888888889999999999999999875
No 277
>2kj6_A Tubulin folding cofactor B; methods development, NESG, solution PSI-2, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=67.63 E-value=25 Score=28.11 Aligned_cols=81 Identities=12% Similarity=0.210 Sum_probs=50.6
Q ss_pred CceeEEEEeCCc---eEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEEEecChHHHHHHHHhhccCCcEEE
Q 014213 260 PKKTVKLVFGED---IRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLVTITTDEELRWAEASAEMQGSVRL 335 (429)
Q Consensus 260 ~~~~vK~~~~~D---iR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDliti~~~~dl~~a~~~~~~~~~~rl 335 (429)
-.++|.|+.... ..-+.|+++.++.+|..+|..+++. ....+|-|.+.+|..|.--.+|+-. .-++ ....-.+|
T Consensus 13 ~~v~l~It~s~~~~~~~e~~v~~~~TV~~LK~kIe~~~Gip~~~QrLi~~g~~g~~~~~L~~D~~t-L~~Y-~I~~g~~I 90 (97)
T 2kj6_A 13 DSVHLHITHANLKSFSADARFSPQMSVEAVKEKLWKKCGTSVNSMALELYDDSGSKVAVLSDDSRP-LGFF-SPFDGFRL 90 (97)
T ss_dssp CCEEEEEEETTSSCCCEEEEECTTCCHHHHHHHHHHHHCCCTTSEEEEEECSSSCBCCCSSGGGSC-HHHH-CCCSCCEE
T ss_pred ceEEEEEEECCCCceEEEEEeCCCChHHHHHHHHHHHHCcCHHHeEEEEecCCCcccceecCCcCC-HHHC-CCCCCCEE
Confidence 345556665333 4455689999999999999999963 4568899998777644211233321 1222 22333678
Q ss_pred EEEeeCC
Q 014213 336 FVVGVNP 342 (429)
Q Consensus 336 ~v~e~~~ 342 (429)
+|+..+|
T Consensus 91 hlvd~~p 97 (97)
T 2kj6_A 91 HIIDLDP 97 (97)
T ss_dssp EEEECCC
T ss_pred EEEeCCC
Confidence 8887554
No 278
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=67.48 E-value=16 Score=32.27 Aligned_cols=67 Identities=10% Similarity=0.060 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--CccHHHHHHH-HHHHHHHcCCCCHHHHHHHHHHHHH
Q 014213 47 ELKEEGNKLFQKRDHGGALLKYEKALKLLPRN--HIDVSYLRSN-MAACYMQMGLSEYPRAIHECNLALE 113 (429)
Q Consensus 47 ~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~--~~~~a~l~~n-rA~~y~kl~~g~y~eAi~~~~~ALe 113 (429)
.-...|..+|+.|+|-+|-+.++.+-...+.. .......+.. +|.++..++.|++..|...+.+|+.
T Consensus 34 ~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 34 RAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 45668999999999999999999988876654 2111222222 2323222222555555555555544
No 279
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=67.05 E-value=13 Score=39.88 Aligned_cols=53 Identities=23% Similarity=0.237 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccc
Q 014213 120 KALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLR 172 (429)
Q Consensus 120 kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a 172 (429)
.+.+.+|...+..|+|..|.+.++.++..+|+|..++..++.++..|+.....
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~~ 502 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAEN 502 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccC
Confidence 46788899999999999999999999999999999999999999999865543
No 280
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=66.32 E-value=55 Score=37.35 Aligned_cols=100 Identities=5% Similarity=-0.086 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC-CCCHH
Q 014213 47 ELKEEGNKLFQKRDHGGALLKYEKALK-----LLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVT-PLYSK 120 (429)
Q Consensus 47 ~lk~~Gn~lf~~gdyeeAl~~Y~kALe-----l~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld-P~~~k 120 (429)
.|...=+.|.+.|+.++|...|.+.-+ ..|+ . ..|+.+-..|.+. |++++|+..+++-.+.. .-+.-
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd-v----vTYNtLI~Glck~--G~~~eA~~Lf~eM~~~G~~PDvv 201 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT-L----DMYNAVMLGWARQ--GAFKELVYVLFMVKDAGLTPDLL 201 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC-H----HHHHHHHHHHHHH--TCHHHHHHHHHHHHHTTCCCCHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC-H----hHHHHHHHHHHhC--CCHHHHHHHHHHHHHcCCCCcHH
Confidence 467777899999999999999976543 3443 2 3788888889999 99999999999887654 23677
Q ss_pred HHHHHHHHHHHcCC-HHHHHHHHHHHHHh--CCCCH
Q 014213 121 ALLKRARCYEALNR-LDLAFRDVTTVLNK--EPKNI 153 (429)
Q Consensus 121 Al~~rA~ay~~LG~-~deAl~~~~kAL~l--~P~n~ 153 (429)
.|..+=.++...|+ .++|.+.|++.... .|+..
T Consensus 202 TYntLI~glcK~G~~~e~A~~Ll~EM~~kG~~PD~v 237 (1134)
T 3spa_A 202 SYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQAL 237 (1134)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHTCCSHHH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCCCChh
Confidence 78888789999998 47888999887764 56543
No 281
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=62.62 E-value=38 Score=34.03 Aligned_cols=104 Identities=12% Similarity=0.049 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCcc-HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC----
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHID-VSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLY---- 118 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~-~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~---- 118 (429)
+=..+.+.|..|.+.|++++-..+........+.-+.. .+-+-.++-..+..+ ++..+.-+..|..+++..-..
T Consensus 18 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~r~f 96 (394)
T 3txn_A 18 KEQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDM-DAGTGIEVQLCKDCIEWAKQEKRTF 96 (394)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTS-CCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567889999999999999999887765554433321 122233344444444 577788888888888764322
Q ss_pred HHHHH--HHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 119 SKALL--KRARCYEALNRLDLAFRDVTTVLNK 148 (429)
Q Consensus 119 ~kAl~--~rA~ay~~LG~~deAl~~~~kAL~l 148 (429)
.+.-. ++|..|+..|+|.+|+..+.+.+.-
T Consensus 97 lr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~ 128 (394)
T 3txn_A 97 LRQSLEARLIALYFDTALYTEALALGAQLLRE 128 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 23223 8899999999999999999888864
No 282
>1t0y_A Tubulin folding cofactor B; ubiquitin-like, cytoskeleton, microtubule, CESG, structural genomics, protein structure initiative, PSI; NMR {Caenorhabditis elegans} SCOP: d.15.1.1
Probab=61.11 E-value=31 Score=28.50 Aligned_cols=81 Identities=14% Similarity=0.147 Sum_probs=54.2
Q ss_pred ceeEEEEeCCc--eEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEE-EecChHHHHHHHHhhccCCcEEEE
Q 014213 261 KKTVKLVFGED--IRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLV-TITTDEELRWAEASAEMQGSVRLF 336 (429)
Q Consensus 261 ~~~vK~~~~~D--iR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDli-ti~~~~dl~~a~~~~~~~~~~rl~ 336 (429)
.++|.|+.... ..-+.|+++.++.+|..+|..+++. ....+|-|.+.+|-.| .+.+|+. -+.......-.+|+
T Consensus 6 ~v~l~V~~~~~~~~~e~~v~~~~TV~~lK~ki~~~~Gip~~~qrL~~~g~~~~~~~~l~~D~~---tL~~y~i~~g~~ih 82 (122)
T 1t0y_A 6 VYDLEITTNATDFPMEKKYPAGMSLNDLKKKLELVVGTTVDSMRIQLFDGDDQLKGELTDGAK---SLKDLGVRDGYRIH 82 (122)
T ss_dssp EEEEEEEESSCCSCEEEEEETTSBHHHHHHHHHHHHCCCTTTEEEEEECSSSSEEEECCCCSS---BTTTTTCCSSEEEE
T ss_pred EEEEEEEECCCCccEEEEeCCCCcHHHHHHHHHHHhCCCHHHeEEEEecCCCccccccCCCcC---CHHHCCCCCCCEEE
Confidence 46777776554 4555689999999999999999953 4568999998777654 2333321 12222323347999
Q ss_pred EEeeCCCC
Q 014213 337 VVGVNPLQ 344 (429)
Q Consensus 337 v~e~~~~~ 344 (429)
|+...|..
T Consensus 83 vvd~~p~~ 90 (122)
T 1t0y_A 83 AVDVTGGN 90 (122)
T ss_dssp EEECTTCC
T ss_pred EEeCCCCC
Confidence 99877653
No 283
>1v6e_A Cytoskeleton-associated protein 1; tubulin-specific chaperone B, tubulin folding cofactor B, microtubule, ubiquitin-like fold, structural genomics; NMR {Mus musculus} SCOP: d.15.1.1
Probab=60.65 E-value=22 Score=27.85 Aligned_cols=81 Identities=6% Similarity=0.078 Sum_probs=52.1
Q ss_pred CCceeEEEEeCCc--eEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEEE-ecChHHHHHHHHhhccCCcEE
Q 014213 259 EPKKTVKLVFGED--IRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLVT-ITTDEELRWAEASAEMQGSVR 334 (429)
Q Consensus 259 ~~~~~vK~~~~~D--iR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDlit-i~~~~dl~~a~~~~~~~~~~r 334 (429)
+..++|.|..... ..-+.++.+.++.+|..+|..+++. ....+|-|.+.+|-.+. +.+|+. -+....-..--+
T Consensus 5 ~~~v~l~I~~~~~~~~~~~~v~~~~TV~~lK~ki~~~~gip~~~qrL~~~~~~g~~~~~l~~D~~---tL~~y~i~~g~~ 81 (95)
T 1v6e_A 5 SSGVMVFISSSLNSFRSEKRYSRSLTIAEFKCKLELVVGSPASCMELELYGADDKFYSKLDQEDA---LLGSYPVDDGCR 81 (95)
T ss_dssp CCCEEEEEEETTSSSCEEEEECTTSBHHHHHHHHHHHTCSCTTTCBCEEECSSSCEEEECCCSSS---BTTSSSCCTTCE
T ss_pred CcEEEEEEEECCCCeeEEEEcCccCHHHHHHHHHHHHHCCCHHHeEEEEeCCCCccccccCCCcC---CHhHCCCCCCCE
Confidence 3457777777555 4556689999999999999999953 45688889887666542 322321 111112222257
Q ss_pred EEEEeeCC
Q 014213 335 LFVVGVNP 342 (429)
Q Consensus 335 l~v~e~~~ 342 (429)
|+|++..|
T Consensus 82 l~v~d~~P 89 (95)
T 1v6e_A 82 IHVIDHSG 89 (95)
T ss_dssp EEEBCCSC
T ss_pred EEEEECCc
Confidence 88887655
No 284
>2eel_A Cell death activator CIDE-A; CIDE-N domain, cell death- inducing DFFA-like effector A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.44 E-value=22 Score=28.54 Aligned_cols=56 Identities=23% Similarity=0.347 Sum_probs=39.2
Q ss_pred CCceeEEEEeCCc--eEEEEccCCccHHHHHHHHHhhCCCCCceEEEEECCCCCEEEecChHHH
Q 014213 259 EPKKTVKLVFGED--IRVAQLPLNSSLLQLREVISDRFPSCRAVLIKYRDEEGDLVTITTDEEL 320 (429)
Q Consensus 259 ~~~~~vK~~~~~D--iR~~~i~~~~~~~~L~~~v~~kf~~~~~~~iky~DedgDliti~~~~dl 320 (429)
.+.+++||. ..| +|+-++- .++.||+.++.++|.....-..=+.++||-.| ++||.
T Consensus 7 ~~~kpfkV~-~~~Rs~k~GV~A--~sL~EL~~K~~~~l~l~~~~~~lvLeeDGT~V---ddEey 64 (91)
T 2eel_A 7 GPARPFRVS-NHDRSSRRGVMA--SSLQELISKTLDALVIATGLVTLVLEEDGTVV---DTEEF 64 (91)
T ss_dssp SCCEEEEEE-CTTSCCCEEEEE--SSHHHHHHHHHHHTTCSSSCEEEEETTTCCBC---CCHHH
T ss_pred CCCCCEEEe-cCCCCeEEeEEc--CCHHHHHHHHHHHhcCCCCCcEEEEeeCCcEE---echhh
Confidence 467888998 444 5554432 48999999999999764444444677899665 47776
No 285
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=60.07 E-value=24 Score=33.21 Aligned_cols=55 Identities=13% Similarity=0.052 Sum_probs=45.8
Q ss_pred ceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCCC--CceEEEEECCCCCEEEec
Q 014213 261 KKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPSC--RAVLIKYRDEEGDLVTIT 315 (429)
Q Consensus 261 ~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~~--~~~~iky~DedgDliti~ 315 (429)
+++++|++-|+..-+.+..+.+-.+|.+.|.++++.. ..|-|.|.|.+|...-+.
T Consensus 1 ~i~~~V~l~d~~~~~~v~~~tt~~el~~~v~~~l~L~e~~~FgL~~~~~~~~~~wLd 57 (294)
T 1ef1_A 1 TISVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVWFFGLQYQDTKGFSTWLK 57 (294)
T ss_dssp CEEEEEEETTEEEEEEECTTCBHHHHHHHHHHHHTCCCGGGEEEEEEBTTSCEEECC
T ss_pred CEEEEEEECCceEEEEECCCCcHHHHHHHHHHHcCCCCcceeEEEEECCCCceeecc
Confidence 4789999988877788999999999999999999543 349999999888765443
No 286
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=59.49 E-value=16 Score=29.28 Aligned_cols=63 Identities=14% Similarity=-0.107 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 014213 49 KEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALE 113 (429)
Q Consensus 49 k~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALe 113 (429)
...|..+|+.|+|-+|-+.++.+-...|.........+..+|.++.....|+. |...+.+++.
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 35788899999999999999988887754222222333334444333323666 7777777765
No 287
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=59.41 E-value=16 Score=29.49 Aligned_cols=34 Identities=12% Similarity=0.148 Sum_probs=29.3
Q ss_pred HHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 41 FIGMSQELKEEGNKLFQKRDHGGALLKYEKALKL 74 (429)
Q Consensus 41 ~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel 74 (429)
.+..|..+-.++..+...|+|++||.+..+|..+
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kAa~y 44 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKATTY 44 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 4577888899999999999999999998887654
No 288
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=58.20 E-value=31 Score=36.74 Aligned_cols=49 Identities=6% Similarity=-0.230 Sum_probs=32.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 014213 99 SEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLN 147 (429)
Q Consensus 99 g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~ 147 (429)
+++..|...+...-.-.....++.|=+|.++..+|+.++|...|.++..
T Consensus 299 ~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 299 GDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp TCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 6777777766554332234566677777777777777777777777664
No 289
>1xg8_A Hypothetical protein SA0798; structural genomics, protein structure initative, MCSG, PSI, protein structure initiative; 2.10A {Staphylococcus aureus subsp} SCOP: c.47.1.17
Probab=58.11 E-value=7.9 Score=31.95 Aligned_cols=59 Identities=24% Similarity=0.387 Sum_probs=43.2
Q ss_pred EeCCceEEEE---ccCC-ccHHHHHHHHHhhCCCCCceEEEEECCCCCEEEecChHHHHHHHHhh
Q 014213 267 VFGEDIRVAQ---LPLN-SSLLQLREVISDRFPSCRAVLIKYRDEEGDLVTITTDEELRWAEASA 327 (429)
Q Consensus 267 ~~~~DiR~~~---i~~~-~~~~~L~~~v~~kf~~~~~~~iky~DedgDliti~~~~dl~~a~~~~ 327 (429)
+||.|+...+ +|++ -+|.=|.-.+.+||| ..+|.+.|.|-+++--.+| +++-++|....
T Consensus 12 VYGAe~iCASCVnaPSSkeTyEWLqAal~RKyp-~~~f~~~YIDI~~~~~~l~-d~~~~~ae~I~ 74 (111)
T 1xg8_A 12 VYGADVICASCVNAPTSKDIYDWLQPLLKRKYP-NISFKYTYIDITKDNDNLT-DHDLQFIERIE 74 (111)
T ss_dssp EEECSSCCGGGSSSCCHHHHHHHHHHHHHHHCT-TSCEEEEEEETTTC---CC-HHHHHHHHHHH
T ss_pred EEcccccchhccCCCCchhHHHHHHHHHhCcCC-CCceEEEEEeccCCccchh-HHHHHHHHHHh
Confidence 4688887766 5655 589999999999996 6789999999888733333 34666676653
No 290
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=56.92 E-value=1.2e+02 Score=31.64 Aligned_cols=110 Identities=11% Similarity=0.053 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCH--
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHID---VSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYS-- 119 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~---~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~-- 119 (429)
+.-++-.|..++-+++|.+|..++..|++..|.+... +..++-.+-.|-+-+ |+++. +.+-..|..-
T Consensus 270 ~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a~gfr~~a~K~lI~V~LLl--G~iP~------r~lf~q~~l~~~ 341 (523)
T 4b4t_S 270 ARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSLGFLQQSNKLHCCIQLLM--GDIPE------LSFFHQSNMQKS 341 (523)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSSCSHHHHHHHHHHHHHHHHH--TCCCC------HHHHTTTSCHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchhhhhHHHHHHHHHHhHHhhc--CCCCC------hHHhhchhHHHH
Confidence 3444455666666666666666666666655544321 112222223333334 44332 1111223322
Q ss_pred -HHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 014213 120 -KALLKRARCYEALNR---LDLAFRDVTTVLNKEPKNIMAAEIAERVK 163 (429)
Q Consensus 120 -kAl~~rA~ay~~LG~---~deAl~~~~kAL~l~P~n~~a~~~La~l~ 163 (429)
..|+.++.|+. .|+ |..++..++..+.-+-+..-+......+.
T Consensus 342 L~pY~~Lv~Avr-~GdL~~F~~~L~~h~~~F~~Dgty~LI~rLr~~vi 388 (523)
T 4b4t_S 342 LLPYYHLTKAVK-LGDLKKFTSTITKYKQLLLKDDTYQLCVRLRSNVI 388 (523)
T ss_dssp HHHHHHHHHHHH-HTCHHHHHHHHHHTHHHHHHTTCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-cCCHHHHHHHHHHhcceeccCChhHHHHHHHHHHH
Confidence 23556666653 343 45566666666666655444443333333
No 291
>2k8h_A Small ubiquitin protein; SUMO, post-translational modifier, signaling protein; NMR {Trypanosoma brucei}
Probab=56.31 E-value=26 Score=28.87 Aligned_cols=72 Identities=17% Similarity=0.151 Sum_probs=49.3
Q ss_pred CCceeEEEEe-CCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEEEecCh-HHHHHHHHhhccCCcEEE
Q 014213 259 EPKKTVKLVF-GEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLVTITTD-EELRWAEASAEMQGSVRL 335 (429)
Q Consensus 259 ~~~~~vK~~~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDliti~~~-~dl~~a~~~~~~~~~~rl 335 (429)
...++|||.- ......+.|..+..+..|++.+.++... ...+++.| ||+.|.-.++ +||.|- ....|.+
T Consensus 24 ~~~I~IkVk~~~g~~i~fkVk~~t~l~kL~~ay~ek~gi~~~~~rfiF---dG~~L~~~~Tp~dl~mE-----DgD~Idv 95 (110)
T 2k8h_A 24 TALVAVKVVNADGAEMFFRIKSRTALKKLIDTYCKKQGISRNSVRFLF---DGTPIDETKTPEELGME-----DDDVIDA 95 (110)
T ss_dssp CCCEEEEEEETTSCCEEEEECTTSSHHHHHHHHHHHHTCCSSSCEEES---SSCBCCSSSHHHHHHCS-----SEEEEEE
T ss_pred CCeEEEEEECCCCCEEEEEECCCChHHHHHHHHHHHhCCCcccEEEEE---CCEEcCCCCCHHHcCCC-----CCCEEEE
Confidence 4568888874 2334467899999999999999999853 35577777 7998876544 556432 2334555
Q ss_pred EEE
Q 014213 336 FVV 338 (429)
Q Consensus 336 ~v~ 338 (429)
++.
T Consensus 96 ~~~ 98 (110)
T 2k8h_A 96 MVE 98 (110)
T ss_dssp ECC
T ss_pred EEc
Confidence 544
No 292
>3a4r_A Nfatc2-interacting protein; ubiquitin fold, coiled coil, cytoplasm, methylation, nucleus, transcription; 1.00A {Mus musculus} PDB: 3a4s_C 3rd2_A
Probab=55.32 E-value=25 Score=26.79 Aligned_cols=59 Identities=12% Similarity=0.088 Sum_probs=42.1
Q ss_pred CceeEEEEeCC--ceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEEEecCh-HHHH
Q 014213 260 PKKTVKLVFGE--DIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLVTITTD-EELR 321 (429)
Q Consensus 260 ~~~~vK~~~~~--DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDliti~~~-~dl~ 321 (429)
..++|||.-.+ ....+.|..+..+..|++.+.++.+. ...+++.| ||+.|.=.++ +||.
T Consensus 6 ~~i~ikV~~~~g~~~i~~~i~~~t~l~kl~~~y~~~~gi~~~~~rf~f---dG~~l~~~~Tp~~l~ 68 (79)
T 3a4r_A 6 QELRLRVQGKEKHQMLEISLSPDSPLKVLMSHYEEAMGLSGHKLSFFF---DGTKLSGKELPADLG 68 (79)
T ss_dssp CCEEEEEECSSTTCEEEEEECTTSCHHHHHHHHHHHHTCTTCCCEEEE---TTEECCSCCCHHHHT
T ss_pred CEEEEEEEeCCCCEEEEEEECCCChHHHHHHHHHHHhCCCcccEEEEE---CCEEcCCCCCHHHcC
Confidence 45788887422 25567899999999999999999853 35577777 6887755433 5553
No 293
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=54.03 E-value=34 Score=26.25 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCC
Q 014213 47 ELKEEGNKLFQKRDHGGALLKYEKALKLLPRNH 79 (429)
Q Consensus 47 ~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~ 79 (429)
.-...|..++..|++++|+..|-+||...|.-.
T Consensus 19 ~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~ 51 (73)
T 3ax2_A 19 EEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQ 51 (73)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHH
Confidence 345789999999999999999999999998644
No 294
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=53.67 E-value=41 Score=27.02 Aligned_cols=52 Identities=29% Similarity=0.446 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQ 95 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~k 95 (429)
+.+..+..+|..+|..++|.+|+..|+++..+..+.... -.+-+.++.|--+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~-ki~~fyl~ec~kk 102 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIK-KIASFYLEECRKK 102 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHH-HHHHHHHHHHHHH
Confidence 677889999999999999999999999999876643211 1122445666443
No 295
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=52.97 E-value=1.6e+02 Score=28.44 Aligned_cols=101 Identities=11% Similarity=-0.100 Sum_probs=54.7
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHhCCCCCc-cHHHHHHHHHHHHHHcCCCCHHHHH---------------
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLK-YEKALKLLPRNHI-DVSYLRSNMAACYMQMGLSEYPRAI--------------- 105 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~-Y~kALel~P~~~~-~~a~l~~nrA~~y~kl~~g~y~eAi--------------- 105 (429)
+.-+.++...++|.++++|++|++. |.-|+.+.-.... .-+.+-..+-.+|.+-+..--++.+
T Consensus 31 EAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~~~~~rl~~l~~~~p~~~~ 110 (312)
T 2wpv_A 31 EAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDDISVARLVRLIAELDPSEP 110 (312)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHTTCCTTCT
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCCCCCc
Confidence 3445567778899999999999988 5555554433221 0011111122333332111111111
Q ss_pred ---HHHHHHHHhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 014213 106 ---HECNLALEVT-------PLYSKALLKRARCYEALNRLDLAFRDVT 143 (429)
Q Consensus 106 ---~~~~~ALeld-------P~~~kAl~~rA~ay~~LG~~deAl~~~~ 143 (429)
...++|+... --++..+..+|..|..-+++.+|..+|-
T Consensus 111 ~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 111 NLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp THHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 2222333221 1256678888888888888888887764
No 296
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=50.73 E-value=1.9e+02 Score=28.34 Aligned_cols=36 Identities=14% Similarity=0.070 Sum_probs=26.5
Q ss_pred HhHHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHhCCC
Q 014213 42 IGMSQELKEEGNKLFQKRDHGGALLK-YEKALKLLPR 77 (429)
Q Consensus 42 l~~A~~lk~~Gn~lf~~gdyeeAl~~-Y~kALel~P~ 77 (429)
-+.-+.++...+.|.+.++|++|++. |+-|+.+.-.
T Consensus 32 YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~ 68 (336)
T 3lpz_A 32 YEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRS 68 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHC
Confidence 44556678888899999999999987 5555555443
No 297
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=49.76 E-value=1.5e+02 Score=26.92 Aligned_cols=72 Identities=15% Similarity=0.036 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--C--CC----------CCccHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALKL--L--PR----------NHIDVSYLRSNMAACYMQMGLSEYPRAIHECN 109 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel--~--P~----------~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~ 109 (429)
.+-...-+..-|....+|..|+.+.+..|+- + |. ++.+--..++.+|....++ |+-++||..+.
T Consensus 61 T~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~--g~r~EaI~y~~ 138 (242)
T 3kae_A 61 TCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLS--GYREEGIGHYV 138 (242)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHT--TCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHh--cCHHHhhhHhh
Confidence 3445566778889999999999999999932 2 21 1223357788899999999 99999999999
Q ss_pred HHHHhCCC
Q 014213 110 LALEVTPL 117 (429)
Q Consensus 110 ~ALeldP~ 117 (429)
+.....|-
T Consensus 139 ~Sf~~~~l 146 (242)
T 3kae_A 139 RSFGKSFL 146 (242)
T ss_dssp HHHHHCCC
T ss_pred hhcCCccc
Confidence 98877763
No 298
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=49.39 E-value=35 Score=36.36 Aligned_cols=119 Identities=9% Similarity=-0.118 Sum_probs=76.7
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 014213 48 LKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRAR 127 (429)
Q Consensus 48 lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ 127 (429)
+...+...+...+.+.|...|........-+......++..+|..++.. +...++...+..+.....+....-++.+.
T Consensus 217 ~~~~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~e~~~r~ 294 (618)
T 1qsa_A 217 MAAVAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGN--DVTDEQAKWRDDAIMRSQSTSLIERRVRM 294 (618)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCST--TCCHHHHHHHHHHHHTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHc--CCChHHHHHHHhccccCCChHHHHHHHHH
Confidence 4455566667779999999999887655544444444444444444433 43667788888776655554444444455
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhh
Q 014213 128 CYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKR 169 (429)
Q Consensus 128 ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~ 169 (429)
++ ..|++..|...|.+.-.-..........++++...+++.
T Consensus 295 Al-r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~ 335 (618)
T 1qsa_A 295 AL-GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGRE 335 (618)
T ss_dssp HH-HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCH
T ss_pred HH-HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCH
Confidence 65 469999999999765543335566677777776666543
No 299
>3tix_A Ubiquitin-like protein SMT3, RNA-induced transcri silencing complex protein TAS3; PIN, rossmann fold, SPOC, alpha-helical hairpin, heterochrom silencing, RITS, RNAI, argonaute; 2.90A {Saccharomyces cerevisiae}
Probab=48.72 E-value=11 Score=34.55 Aligned_cols=74 Identities=15% Similarity=0.173 Sum_probs=54.6
Q ss_pred CCceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEEEecCh-HHHHHHHHhhccCCcEEEE
Q 014213 259 EPKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLVTITTD-EELRWAEASAEMQGSVRLF 336 (429)
Q Consensus 259 ~~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDliti~~~-~dl~~a~~~~~~~~~~rl~ 336 (429)
...++|||...+....|.|-.+..|..|++...++.+. .+.+++.| ||+.|.-.++ +||.|- ....|.++
T Consensus 55 ~e~InLKVk~dG~eV~FKIKrtTpL~KLmeAYcERqGL~~~sIRFLF---DGqRI~~ddTPeDLdME-----DGDtIDV~ 126 (207)
T 3tix_A 55 ETHINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLTFLY---DGIEIQADQTPEDLDME-----DNDIIEAH 126 (207)
T ss_dssp CCEEEEEEECSSCEEEEEEETTSCTHHHHHHHHHHTTCCGGGSCEEE---TTEECCSSCCTTTTTCC-----TTEEEEEC
T ss_pred CCcEEEEEecCCCEEEEEEccCChHHHHHHHHHHHhCCCcccEEEEE---CCeecCCCCCHHHcCCC-----CCCEEEEE
Confidence 45788999866667788899999999999999999953 35577777 8998887655 667542 23456666
Q ss_pred EEee
Q 014213 337 VVGV 340 (429)
Q Consensus 337 v~e~ 340 (429)
+..+
T Consensus 127 leQ~ 130 (207)
T 3tix_A 127 REQI 130 (207)
T ss_dssp CCCC
T ss_pred Eecc
Confidence 5543
No 300
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=48.46 E-value=58 Score=29.07 Aligned_cols=81 Identities=7% Similarity=-0.070 Sum_probs=58.7
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC--------CCCHHHH
Q 014213 51 EGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVT--------PLYSKAL 122 (429)
Q Consensus 51 ~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld--------P~~~kAl 122 (429)
+=+.+.+.|+++.|++..... ++. ..|..+|...+.. |+++-|..+|.++=..+ -.+...+
T Consensus 11 rF~LAL~lg~l~~A~e~a~~l-----~~~----~~Wk~Lg~~AL~~--gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L 79 (177)
T 3mkq_B 11 RFDLALEYGNLDAALDEAKKL-----NDS----ITWERLIQEALAQ--GNASLAEMIYQTQHSFDKLSFLYLVTGDVNKL 79 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH-----CCH----HHHHHHHHHHHHT--TCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHh-----CCH----HHHHHHHHHHHHc--CChHHHHHHHHHhCCHHHHHHHHHHhCCHHHH
Confidence 345667889999999876543 233 4899999999998 99999999988762221 2344556
Q ss_pred HHHHHHHHHcCCHHHHHHHH
Q 014213 123 LKRARCYEALNRLDLAFRDV 142 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~ 142 (429)
..++..-...|++.-|...+
T Consensus 80 ~kla~iA~~~g~~n~af~~~ 99 (177)
T 3mkq_B 80 SKMQNIAQTREDFGSMLLNT 99 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHCccHHHHHHHH
Confidence 67777788888888776554
No 301
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=48.45 E-value=73 Score=36.12 Aligned_cols=92 Identities=14% Similarity=0.009 Sum_probs=66.4
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH---h--------------
Q 014213 52 GNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALE---V-------------- 114 (429)
Q Consensus 52 Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALe---l-------------- 114 (429)
...++..+.|+-|.. .+...|.++. ..+-+|.||+.+ |++++|...|.+|-. .
T Consensus 819 ~~~l~~~~~~~~~~~----l~~~~~~~~~----~~yl~g~~~L~~--ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~ 888 (1139)
T 4fhn_B 819 VEKLFLFKQYNACMQ----LIGWLNSDPI----AVYLKALIYLKS--KEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEI 888 (1139)
T ss_dssp HHHHHHHSCTTHHHH----HHHHSCCCHH----HHHHHHHHHHHT--TCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHH
T ss_pred HHHHHHhhhHHHHHH----HhhhccCCcH----HHHHHHHHHHhc--CCHHHHHHHHHHHhhhhcccchhhhhhcccccc
Confidence 345666677765544 3455676653 346799999999 999999999987621 0
Q ss_pred ------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCH
Q 014213 115 ------TPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEP-KNI 153 (429)
Q Consensus 115 ------dP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P-~n~ 153 (429)
....+..|+.....+...+.++.+++..+.|++..+ ++.
T Consensus 889 ~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~ 934 (1139)
T 4fhn_B 889 AEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDE 934 (1139)
T ss_dssp HHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCH
T ss_pred cccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCCh
Confidence 111345677778899999999999999999998765 444
No 302
>2kjr_A CG11242; UBL, ubiquitin, ubiquitin-like, structural genomics, PSI-2, protein structure initiative; NMR {Drosophila melanogaster}
Probab=47.92 E-value=92 Score=24.54 Aligned_cols=55 Identities=9% Similarity=0.020 Sum_probs=39.9
Q ss_pred CCCCceeEEEEeCCc---eEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEE
Q 014213 257 DNEPKKTVKLVFGED---IRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLV 312 (429)
Q Consensus 257 ~~~~~~~vK~~~~~D---iR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDli 312 (429)
.....++|.|+.... ..-+.++++.++.+|..+|..+++. ....+|-|.| +|-.+
T Consensus 11 ~~~~~v~l~It~s~~~~~~~~~~v~~~~TV~~LK~kI~~~~GiP~~~QrL~~~~-~g~~~ 69 (95)
T 2kjr_A 11 GKSDFIKVNVSNSHNDAVAFEVKLAKDLTVAQLKTKLEILTGGCAGTMKVQVFK-GDTCV 69 (95)
T ss_dssp CCCCEEEEEEEESSCSCEEEEEEEETTCBHHHHHHHHHHHHCSCTTTEEEEEEE-TTEEE
T ss_pred CCCCeEEEEEEECCCCceEEEEEeCccCHHHHHHHHHHHHHCcCHHHeEEEEec-CCccc
Confidence 445566777776443 4556689999999999999999953 4558888887 55444
No 303
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=47.70 E-value=95 Score=31.23 Aligned_cols=69 Identities=16% Similarity=0.011 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh
Q 014213 44 MSQELKEEGNKLFQKRDHGGALLKYEKALK---LLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV 114 (429)
Q Consensus 44 ~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALe---l~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel 114 (429)
..+-+..+...++..+||..|-..+.++.. -.+..+.....++...|..|+.- ++|.+|-..|..+++.
T Consensus 176 kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~~e--~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 176 KIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISLHK--REYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHhc
Confidence 446677788899999999999999998743 23333434566778888888888 9999999999888754
No 304
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=47.64 E-value=38 Score=35.69 Aligned_cols=56 Identities=16% Similarity=0.120 Sum_probs=47.2
Q ss_pred CceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCCC--CceEEEEECCCCCEEEec
Q 014213 260 PKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPSC--RAVLIKYRDEEGDLVTIT 315 (429)
Q Consensus 260 ~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~~--~~~~iky~DedgDliti~ 315 (429)
+++.|+|+|-|++.-+.|..+++-.+|.+.|..+++.. ..|-|.|.|.+|...-+.
T Consensus 3 k~i~v~V~llDgt~e~~vd~~tt~~ell~~V~~~LgL~e~~~FGL~~~d~~~~~~WLd 60 (575)
T 2i1j_A 3 KSMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREVWFFGLQYTDSKGDLTWIK 60 (575)
T ss_dssp CEEEEEEECSSCEEEEEEETTCBHHHHHHHHHHHHTCCCGGGEEEEEEBTTSCEEECC
T ss_pred ceEEEEEEeCCCeEEEEECCCCCHHHHHHHHHHHcCCCCccceeEEEEecCcchhHhh
Confidence 57899999988777788999999999999999999654 349999999888765554
No 305
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=47.28 E-value=49 Score=25.32 Aligned_cols=39 Identities=5% Similarity=0.025 Sum_probs=32.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAER 161 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~ 161 (429)
..+|..+...|++++|+.+|-+|+...|.-...+..+.+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q~ 59 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQ 59 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 457888999999999999999999998887776666554
No 306
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=46.31 E-value=50 Score=33.27 Aligned_cols=44 Identities=18% Similarity=0.066 Sum_probs=33.2
Q ss_pred HHHHHHHHHhCC--------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 105 IHECNLALEVTP--------LYSKALLKRARCYEALNRLDLAFRDVTTVLNK 148 (429)
Q Consensus 105 i~~~~~ALeldP--------~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l 148 (429)
+.+++.|+..-| ...-|+..+|++|..+++|++|+..+++++..
T Consensus 168 ~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 168 IETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 555555555433 23457888899999999999999999999864
No 307
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=45.54 E-value=58 Score=36.27 Aligned_cols=94 Identities=15% Similarity=0.020 Sum_probs=62.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-h---------------
Q 014213 51 EGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALE-V--------------- 114 (429)
Q Consensus 51 ~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALe-l--------------- 114 (429)
....+...+.|+-|.+ .+...|.++..... +|.||+.+ |++++|...|.+|-. +
T Consensus 816 l~~~L~~~~~~~~a~e----L~~~~~~t~~~~yv----~gr~~L~~--ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ 885 (950)
T 4gq2_M 816 LVEKLFLFKQYNACMQ----LIGWLNSDPIAVYL----KALIYLKS--KEAVKAVRCFKTTSLVLYSHTSQFAVLREFQE 885 (950)
T ss_dssp HHHHHHHTTCHHHHHH----HGGGCCSSHHHHHH----HHHHHHHT--TCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHH
T ss_pred HHHHHHHhcHHHHHHH----HHhhcCCChHHHHH----HHHHHHHc--CCHHHHHHHHHHHhhhcccCcccccchhhhhh
Confidence 4556677777765443 34555655444444 57788888 888888888876531 1
Q ss_pred -----CCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCCHH
Q 014213 115 -----TPL--YSKALLKRARCYEALNRLDLAFRDVTTVLNK-EPKNIM 154 (429)
Q Consensus 115 -----dP~--~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l-~P~n~~ 154 (429)
.+. ....|+.....+...+-++-++...+.|++. .++++.
T Consensus 886 ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 886 IAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDED 933 (950)
T ss_dssp HHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHH
T ss_pred ccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCcc
Confidence 111 2235677788999999999999999999975 455554
No 308
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=45.34 E-value=42 Score=26.62 Aligned_cols=38 Identities=16% Similarity=0.186 Sum_probs=31.7
Q ss_pred CCchhHHHHhHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 014213 34 YDKDTEVFIGMSQELKEEGNKLFQKRDHGGALLKYEKA 71 (429)
Q Consensus 34 ~d~d~~~~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kA 71 (429)
+......++++|..+.+-|..++.+||+..|+.++.-|
T Consensus 28 l~~~a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa 65 (87)
T 2pmr_A 28 LSDDEEAVVERALNYRDDSVYYLEKGDHITSFGCITYA 65 (87)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 44566678899999999999999999999999886544
No 309
>2eke_C Ubiquitin-like protein SMT3; UBC9, SUMO binding motif, SBM, ligase/protein binding complex; 1.90A {Saccharomyces cerevisiae} SCOP: d.15.1.1
Probab=45.31 E-value=18 Score=29.70 Aligned_cols=61 Identities=18% Similarity=0.228 Sum_probs=44.6
Q ss_pred CCCceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEEEecCh-HHHH
Q 014213 258 NEPKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLVTITTD-EELR 321 (429)
Q Consensus 258 ~~~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDliti~~~-~dl~ 321 (429)
....++|||........|.|..+..+..|++.+.++.+. ...+++.| ||+.|.=.++ +||.
T Consensus 28 ~~~~I~IkV~~~g~~i~fkIk~tt~l~kL~~ay~ek~gi~~~~~rF~F---dG~rl~~~~Tp~dl~ 90 (106)
T 2eke_C 28 PETHINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLY---DGIRIQADQTPEDLD 90 (106)
T ss_dssp CCSEEEEEEECSSCEEEEEEETTSCTHHHHHHHHHHHTCCGGGEEEEE---TTEECCTTCCTTTTT
T ss_pred CCCeEEEEEecCCcEEEEEeCCCCHHHHHHHHHHHHhCCCcccEEEEE---CCeEcCCCCCHHHcC
Confidence 346788999863445677899999999999999999963 35577777 7887764433 5553
No 310
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=43.87 E-value=64 Score=25.96 Aligned_cols=34 Identities=15% Similarity=0.125 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 014213 45 SQELKEEGNKLFQKRDHGGALLKYEKALKLLPRN 78 (429)
Q Consensus 45 A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~ 78 (429)
-..-...|..++..|+++.|+..|-+||...|.-
T Consensus 20 Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 20 FLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 3445678999999999999999999999998863
No 311
>1wia_A Hypothetical ubiquitin-like protein (riken cDNA 2010008E23); 'structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1
Probab=43.79 E-value=55 Score=25.26 Aligned_cols=45 Identities=13% Similarity=0.121 Sum_probs=34.5
Q ss_pred CceeEEEEe-CCceEEEEccCCccHHHHHHHHHhhCCCCCceEEEEEC
Q 014213 260 PKKTVKLVF-GEDIRVAQLPLNSSLLQLREVISDRFPSCRAVLIKYRD 306 (429)
Q Consensus 260 ~~~~vK~~~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~~~~~~iky~D 306 (429)
..++|.|.. .+....+.++.+.++.+|..+|..+. ....+|-|..
T Consensus 6 ~~m~i~Vk~~~g~~~~~~v~~~~TV~~LK~~i~~~~--~~~qrLi~~G 51 (95)
T 1wia_A 6 SGINVRLKFLNDTEELAVARPEDTVGTLKSKYFPGQ--ESQMKLIYQG 51 (95)
T ss_dssp CSEEEEEEETTTEEEEEEECSSSBHHHHHHHHSSST--TTTCEEEETT
T ss_pred CeEEEEEEeCCCCEEEEEECCCCcHHHHHHHHHhhC--cCcEEEEECC
Confidence 345566643 45667778999999999999999998 6677787853
No 312
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=43.76 E-value=29 Score=28.02 Aligned_cols=24 Identities=17% Similarity=0.044 Sum_probs=12.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHH
Q 014213 122 LLKRARCYEALNRLDLAFRDVTTV 145 (429)
Q Consensus 122 l~~rA~ay~~LG~~deAl~~~~kA 145 (429)
+-++|..+..-|+|++|+.+.++|
T Consensus 18 ~~RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 18 QSRRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhHHHHHHhcCCHHHHHHHHHHH
Confidence 445555555566665555544443
No 313
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=42.68 E-value=1.1e+02 Score=26.91 Aligned_cols=34 Identities=12% Similarity=0.010 Sum_probs=29.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 115 TPLYSKALLKRARCYEALNRLDLAFRDVTTVLNK 148 (429)
Q Consensus 115 dP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l 148 (429)
++-.+..++.+|.||..+|+..+|-+.+.+|-+-
T Consensus 121 ~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 121 NEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 4556899999999999999999999998888763
No 314
>2io0_B Small ubiquitin-related modifier 2 precursor; SUMO, SENP, ULP, complex, protein binding, hydrolase; 2.30A {Homo sapiens} SCOP: d.15.1.1
Probab=42.50 E-value=25 Score=27.77 Aligned_cols=71 Identities=14% Similarity=0.243 Sum_probs=47.6
Q ss_pred CceeEEEEe-CCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEEEecCh-HHHHHHHHhhccCCcEEEE
Q 014213 260 PKKTVKLVF-GEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLVTITTD-EELRWAEASAEMQGSVRLF 336 (429)
Q Consensus 260 ~~~~vK~~~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDliti~~~-~dl~~a~~~~~~~~~~rl~ 336 (429)
..++|||.- ......+.|..+..+..|++.+.++.+. ...+++.| ||+.|.-.++ +||.| .....|.++
T Consensus 4 ~~i~ikVk~~~g~~v~~~vk~~t~l~kl~~~y~~~~gi~~~~~rf~F---dG~~l~~~~Tp~dl~m-----edgD~Idv~ 75 (91)
T 2io0_B 4 DHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRF---DGQPINETDTPAQLEM-----EDEDTIDVF 75 (91)
T ss_dssp CEEEEEEECTTSCEEEEEEETTSCTHHHHHHHHHHTTCCSTTEEEEE---TTEECCTTCCTTTTTC-----CTTEEEEEE
T ss_pred CeEEEEEECCCCCEEEEEECCCChHHHHHHHHHHHhCCCcccEEEEE---CCEEcCCCCCHHHcCC-----CCCCEEEEE
Confidence 357788873 3334567799999999999999999953 35677777 6887754433 44533 223346665
Q ss_pred EE
Q 014213 337 VV 338 (429)
Q Consensus 337 v~ 338 (429)
+.
T Consensus 76 ~~ 77 (91)
T 2io0_B 76 QQ 77 (91)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 315
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=42.11 E-value=59 Score=32.82 Aligned_cols=52 Identities=17% Similarity=0.233 Sum_probs=37.3
Q ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 89 MAACYMQMGLSEYPRAIHECNLALEVTP--------LYSKALLKRARCYEALNRLDLAFRDVTTVLNK 148 (429)
Q Consensus 89 rA~~y~kl~~g~y~eAi~~~~~ALeldP--------~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l 148 (429)
...+|-++ +.+++.|+.+-| .-.-|+..+|++|..+|+|++|+..+++++..
T Consensus 166 ~~evy~~I--------~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 166 VAECYTEI--------ISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHH--------HHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH--------HHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 45566544 555555555433 23457888899999999999999999999864
No 316
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=42.04 E-value=15 Score=28.67 Aligned_cols=44 Identities=30% Similarity=0.376 Sum_probs=31.1
Q ss_pred EEEEECCCCCEEEecChHH-HHHHHHhhccCCcEEEEEEeeCCCCchhhhhh
Q 014213 301 LIKYRDEEGDLVTITTDEE-LRWAEASAEMQGSVRLFVVGVNPLQDPLYERF 351 (429)
Q Consensus 301 ~iky~DedgDliti~~~~d-l~~a~~~~~~~~~~rl~v~e~~~~~e~~~~~~ 351 (429)
.|+-.|+||..+-|.+..| |++|.+. | |-+++|+|.-.|+.=.+
T Consensus 15 eVrli~~~Ge~lGv~~~~eAl~~A~e~----~---LDLVevsp~a~PPVCkI 59 (78)
T 1tif_A 15 EVRLIDQNGDQLGIKSKQEALEIAARR----N---LDLVLVAPNAKPPVCRI 59 (78)
T ss_dssp EEEEECTTSCEEEEEEHHHHHHHHHHT----T---CEEEEEETTSSSCEEEE
T ss_pred EEEEECCCCcCCCcccHHHHHHHHHHc----C---CCEEEECCCCCCCEEEE
Confidence 3667899999886666544 7777663 3 55778888888875543
No 317
>1v86_A DNA segment, CHR 7, wayne state university 128, expressed; ubiquitin fold, structural genomics, D7WSU128E protein; HET: DNA; NMR {Mus musculus} SCOP: d.15.1.1
Probab=41.96 E-value=35 Score=26.74 Aligned_cols=47 Identities=15% Similarity=0.218 Sum_probs=36.0
Q ss_pred CceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEEC
Q 014213 260 PKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRD 306 (429)
Q Consensus 260 ~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~D 306 (429)
.+++|.|.++..+..+.|+.+.++.+|.++|..+... ....+|-|+.
T Consensus 16 ~~~~i~Vk~~g~~~~i~v~~~~TV~~LK~~I~~~tgip~~~QrL~~~G 63 (95)
T 1v86_A 16 ELVDLKIIWNKTKHDVKVPLDSTGSELKQKIHSITGLPPAMQKVMYKG 63 (95)
T ss_dssp CCEEEEEEETTEEEEEEECTTSBHHHHHHHHHHHHCSCSTTCCCBSSS
T ss_pred ceEEEEEEECCEEEEEEECCCCcHHHHHHHHHHHHCcCHHHeEEEECC
Confidence 4566777778888888999999999999999999842 2345555644
No 318
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=41.80 E-value=58 Score=32.58 Aligned_cols=63 Identities=16% Similarity=0.024 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 84 YLRSNMAACYMQMGLSEYPRAIHECNLALEVTPL---YSKALLKRARCYEALNRLDLAFRDVTTVLNK 148 (429)
Q Consensus 84 ~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~---~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l 148 (429)
.++..+|..|++. |++++|+..+.++...... -...++..-.++...++|..+...+.++..+
T Consensus 132 ~~~~~la~~~~~~--Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 132 QAWINLGEYYAQI--GDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp SCCHHHHHHHHHH--CCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc--CCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 3667899999999 9999999999998876432 3678888999999999999999999999776
No 319
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=41.26 E-value=64 Score=32.94 Aligned_cols=30 Identities=17% Similarity=-0.007 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 119 SKALLKRARCYEALNRLDLAFRDVTTVLNK 148 (429)
Q Consensus 119 ~kAl~~rA~ay~~LG~~deAl~~~~kAL~l 148 (429)
.-|+..+|++|..+++|++|+..+++++..
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 456777788888888888888888888765
No 320
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=41.16 E-value=88 Score=29.10 Aligned_cols=57 Identities=12% Similarity=0.053 Sum_probs=40.2
Q ss_pred HHcCCHHHHHHHHHHHHHh-----CCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh
Q 014213 56 FQKRDHGGALLKYEKALKL-----LPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV 114 (429)
Q Consensus 56 f~~gdyeeAl~~Y~kALel-----~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel 114 (429)
|..|+-+.|...|+.|+++ .|.+|..+. +..|.+..|+.. .++.++|...+.+|+.+
T Consensus 136 ~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLG-LaLNfSVFyYEI-ln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 136 FGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLG-FIQNLAYILSEK-YGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHH-HHHHHHHHHHHT-SSCHHHHHHHHHHHHHH
T ss_pred HccccHHHHHHHHHHHHHHHHhhCCCCChHHHH-HHHHHHHHHHHH-ccCHHHHHHHHHHHHHH
Confidence 3567788999999999875 344554344 445556665554 38999999999998763
No 321
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=40.27 E-value=1.2e+02 Score=33.85 Aligned_cols=50 Identities=14% Similarity=-0.004 Sum_probs=38.3
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 014213 91 ACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVL 146 (429)
Q Consensus 91 ~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL 146 (429)
..++.. +.|+-| ...+..-|.++-.-|-+|.+|..+|++++|..+|++|-
T Consensus 818 ~~L~~~--~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 818 EKLFLF--KQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHT--TCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHh--cHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 334445 777654 34568888888888999999999999999999998654
No 322
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=40.20 E-value=36 Score=36.42 Aligned_cols=50 Identities=18% Similarity=0.039 Sum_probs=41.3
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH
Q 014213 86 RSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDL 137 (429)
Q Consensus 86 ~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~de 137 (429)
...+|...+.- |+|.-|...++.++..+|++..|...+|.+|.++|.-.+
T Consensus 452 ~~~~a~~~~~~--g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~ 501 (658)
T 2cfu_A 452 LLEQARASYAR--GEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAE 501 (658)
T ss_dssp HHHHHHHHHHT--TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHC--CCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 34466666777 999999999999999999999999999999999986543
No 323
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=40.13 E-value=45 Score=26.41 Aligned_cols=33 Identities=18% Similarity=0.073 Sum_probs=28.5
Q ss_pred HHHHhHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 014213 39 EVFIGMSQELKEEGNKLFQKRDHGGALLKYEKA 71 (429)
Q Consensus 39 ~~~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kA 71 (429)
..++++|..+.+-|..|+.+||+..|+.++.-|
T Consensus 29 ~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa 61 (86)
T 2oo2_A 29 EGFMRNIEAYISDSRYFLEKGDLVRAFECVVWA 61 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 457899999999999999999999999887544
No 324
>2kzr_A Ubiquitin thioesterase OTU1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, hydrolase; NMR {Mus musculus}
Probab=39.87 E-value=42 Score=25.63 Aligned_cols=43 Identities=16% Similarity=0.021 Sum_probs=31.6
Q ss_pred eEEEEeCCceEEEE-ccCCccHHHHHHHHHhhCCC-CCceEEEEE
Q 014213 263 TVKLVFGEDIRVAQ-LPLNSSLLQLREVISDRFPS-CRAVLIKYR 305 (429)
Q Consensus 263 ~vK~~~~~DiR~~~-i~~~~~~~~L~~~v~~kf~~-~~~~~iky~ 305 (429)
+|+|...+-.+++. ++.+.++.+|...|.++.+. ...++|.|-
T Consensus 2 ~i~vr~~~G~~~v~~l~~~~Tv~~Lk~~I~~~~gi~~~~qrL~~~ 46 (86)
T 2kzr_A 2 RVRCKAKGGTHLLQGLSSRTRLRELQGQIAAITGIAPGSQRILVG 46 (86)
T ss_dssp CEEEEETTEEEEECSCCTTCBHHHHHHHHHHHTCCCTTTCCCEES
T ss_pred EEEEEcCCCCEEeeecCCCCCHHHHHHHHHHHhCCCccceEEEeC
Confidence 35555544456677 89999999999999999863 355777774
No 325
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=39.45 E-value=39 Score=32.14 Aligned_cols=68 Identities=9% Similarity=0.064 Sum_probs=47.9
Q ss_pred cccCCCCceeEEEEeCCc-eEEEEccCCccHHHHHHHHHhhCCCC--CceEEEEECCCCCEEEecChHHHH
Q 014213 254 STEDNEPKKTVKLVFGED-IRVAQLPLNSSLLQLREVISDRFPSC--RAVLIKYRDEEGDLVTITTDEELR 321 (429)
Q Consensus 254 ~~~~~~~~~~vK~~~~~D-iR~~~i~~~~~~~~L~~~v~~kf~~~--~~~~iky~DedgDliti~~~~dl~ 321 (429)
+.+.....+.++|++-|| ...+.|..+.+-.+|.+.|.++++.. ..|-|.|.|.+|...-+..+.-+.
T Consensus 10 ~~~~~~~~~~~~V~lldgt~~~~~vd~~tt~~el~~~v~~~l~L~e~~~FgL~~~~~~~~~~wLd~~k~i~ 80 (296)
T 3qij_A 10 GRENLYFQGHCKVSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAIWDNATSKTWLDSAKEIK 80 (296)
T ss_dssp -------CCEEEEECTTSCEEEEECCTTCBHHHHHHHHHHHHTCSSGGGEEEEEEEETTEEEECCTTSBHH
T ss_pred cCCCCCceEEEEEEccCCCEEEEEECCCCCHHHHHHHHHHHcCCCCcceeEEEEEcCCCccchhccchhHH
Confidence 445556789999998665 45566899999999999999999644 349999999877666565555443
No 326
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=39.37 E-value=76 Score=32.47 Aligned_cols=91 Identities=8% Similarity=-0.026 Sum_probs=64.7
Q ss_pred CHHHHHHHHHHHHHhCCCCCc---------c---HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCC----------C
Q 014213 60 DHGGALLKYEKALKLLPRNHI---------D---VSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTP----------L 117 (429)
Q Consensus 60 dyeeAl~~Y~kALel~P~~~~---------~---~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP----------~ 117 (429)
..++|.....++..+.-++.. - ...+-+++-.+|+++ ++..-+...+...-...+ .
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl--~~~~lckni~k~i~~~~~~p~~~~~p~~q 218 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRI--ESPQLCSNIFKNFQPKSMLAHFNEYQLDQ 218 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHS--SCCTTHHHHHHTHHHHCCCSCGGGSCHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHc--CCHHHHHHHHHHhccCCCCcChhhCCccc
Confidence 467788888888887543211 0 133456777889999 888877766643322221 1
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCC
Q 014213 118 YSKALLKRARCYEALNRLDLAFRDVTTVLNK-EPKN 152 (429)
Q Consensus 118 ~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l-~P~n 152 (429)
.+..+|.+|..+...++|.+|..++..|+.. .|.+
T Consensus 219 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 219 QIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 2456899999999999999999999999998 7754
No 327
>1hyw_A GPW, head-TO-tail joining protein W; novel fold, two helices, one two-stranded beta-sheet, viral protein; NMR {Enterobacteria phage lambda} SCOP: d.186.1.1 PDB: 2l6q_A 2l6r_A
Probab=39.24 E-value=76 Score=23.91 Aligned_cols=42 Identities=21% Similarity=0.252 Sum_probs=34.3
Q ss_pred HHHHHHHHHhhCCCCCceEEEEECCCCCEEEec--ChHHHHHHHHhh
Q 014213 283 LLQLREVISDRFPSCRAVLIKYRDEEGDLVTIT--TDEELRWAEASA 327 (429)
Q Consensus 283 ~~~L~~~v~~kf~~~~~~~iky~DedgDliti~--~~~dl~~a~~~~ 327 (429)
+.++...+.+...+.+.+.|.| ||--||.+ |-+||...+...
T Consensus 7 L~~a~~A~~~L~tG~~~vsV~y---dgr~V~Y~~asi~~L~~~I~~l 50 (68)
T 1hyw_A 7 LAAARAALHDLMTGKRVATVQK---DGRRVEFTATSVSDLKKYIAEL 50 (68)
T ss_dssp HHHHHHHHHHHTTSCCCEEEEC---SSCEEEECTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCceEEEEE---CCEEEEEecCCHHHHHHHHHHH
Confidence 4556667777777888899999 59999999 999999987654
No 328
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=38.19 E-value=59 Score=32.87 Aligned_cols=45 Identities=20% Similarity=0.233 Sum_probs=33.5
Q ss_pred HHHHHHHHHhCC--------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 014213 105 IHECNLALEVTP--------LYSKALLKRARCYEALNRLDLAFRDVTTVLNKE 149 (429)
Q Consensus 105 i~~~~~ALeldP--------~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~ 149 (429)
+.+++.|+..-| .-.-|+..+|++|..+++|++|+..+++++...
T Consensus 180 ~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 180 VSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 555555555433 234578888999999999999999999998754
No 329
>2i1s_A Hypothetical protein; methanosarcina mazei,MAD, PSI-2,MCSG, structural genomics, protein structure initiative; 2.30A {Methanosarcina mazei} SCOP: d.343.1.1
Probab=38.08 E-value=77 Score=28.14 Aligned_cols=41 Identities=24% Similarity=0.217 Sum_probs=33.2
Q ss_pred CCceeEEEEeCC---c-eEEEEccCCccHHHHHHHHHhhCCCCCc
Q 014213 259 EPKKTVKLVFGE---D-IRVAQLPLNSSLLQLREVISDRFPSCRA 299 (429)
Q Consensus 259 ~~~~~vK~~~~~---D-iR~~~i~~~~~~~~L~~~v~~kf~~~~~ 299 (429)
....++||.+.+ + -|+|.||.+.||.+|-+.|+.-|+-.+.
T Consensus 6 ~~iy~lrV~L~~~~p~iWRri~Vp~~~TL~~LH~vIq~afgw~~~ 50 (188)
T 2i1s_A 6 EKVYHLKLSIKGITPQIWRRIQVPENYTFLDLHKAIQAVMDWEDY 50 (188)
T ss_dssp CEEEEEEEEETTCSSCEEEEEEEETTCBHHHHHHHHHHHTTCCCC
T ss_pred CcEEEEEEEECCCCCCeEEEEEECCCCCHHHHHHHHHHHhCCCCC
Confidence 346788888753 3 5899999999999999999999975433
No 330
>2bwf_A Ubiquitin-like protein DSK2; signaling protein, UBA, signaling proteins; 1.15A {Saccharomyces cerevisiae} SCOP: d.15.1.1 PDB: 2bwe_S
Probab=37.81 E-value=70 Score=23.14 Aligned_cols=45 Identities=18% Similarity=0.239 Sum_probs=33.9
Q ss_pred eeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEEC
Q 014213 262 KTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRD 306 (429)
Q Consensus 262 ~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~D 306 (429)
++|.|..++....+.++.+.+..+|..+|..+++. ....+|-|..
T Consensus 5 m~i~vk~~g~~~~~~v~~~~tV~~LK~~i~~~~~i~~~~qrL~~~g 50 (77)
T 2bwf_A 5 LNIHIKSGQDKWEVNVAPESTVLQFKEAINKANGIPVANQRLIYSG 50 (77)
T ss_dssp EEEEEEETTEEEEEEECTTCBHHHHHHHHHHHHCCCGGGEEEEETT
T ss_pred EEEEEEECCEEEEEEECCCCcHHHHHHHHHHHhCCCHHHEEEEECC
Confidence 44555446677788899999999999999999843 3457777753
No 331
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=37.01 E-value=48 Score=32.45 Aligned_cols=48 Identities=15% Similarity=0.267 Sum_probs=39.0
Q ss_pred CceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCC-----CCceEEEEECC
Q 014213 260 PKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPS-----CRAVLIKYRDE 307 (429)
Q Consensus 260 ~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~-----~~~~~iky~De 307 (429)
..+++||+...=++.+++.++.+..+...+|++++|. -...-+...|+
T Consensus 2 ~~~~~~~~~~~~~~~~~f~~~~~v~~~~~~i~e~~~~~~~~~~~~y~l~~~~~ 54 (371)
T 3ivf_A 2 VALSLKISIGNVVKTMQFEPSTMVYDACRMIRERIPEALAGPPNDFGLFLSDD 54 (371)
T ss_dssp CCEEEEEEETTEEEEEEECTTCBHHHHHHHHHTTCGGGGSSCGGGEEEEECCS
T ss_pred ccEEEEEEecceeEEEEECCCCCHHHHHHHHHHhcccccCCCHHHCeEeccCC
Confidence 4678999999889999999999999999999999973 23355555554
No 332
>2daf_A FLJ35834 protein; hypothetical protein FLJ35834, ubiquitin-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.48 E-value=1.1e+02 Score=25.49 Aligned_cols=83 Identities=22% Similarity=0.305 Sum_probs=57.5
Q ss_pred CCCceeEEEE-e-CCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEEEecChHHHHHHHHhhccCCcEE
Q 014213 258 NEPKKTVKLV-F-GEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLVTITTDEELRWAEASAEMQGSVR 334 (429)
Q Consensus 258 ~~~~~~vK~~-~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDliti~~~~dl~~a~~~~~~~~~~r 334 (429)
....++|||+ . +++...+.+++++++.+|.+.+..+|.. ....+|-|. |- -+-|++=| .---...++.+.
T Consensus 12 ~~~~itvkv~l~~~~~k~tv~v~~d~TV~dLKe~ls~~~~iP~e~qrLIy~---GK--iLKD~eTL--~~~gIk~g~TIh 84 (118)
T 2daf_A 12 EDSLATVKVVLIPVGQEIVIPFKVDTILKYLKDHFSHLLGIPHSVLQIRYS---GK--ILKNNETL--VQHGVKPQEIVQ 84 (118)
T ss_dssp CSSCEEEEEEETTTCCEEEEEECSSSCSHHHHHHHHHHHTCCTTTEEEEET---TE--EECSSCCH--HHHSCCSSCEEE
T ss_pred cCccEEEEEEEcCCCcEEEEEeCCCCcHHHHHHHHHhhhCCChHHEEEEEC---Ce--EcCCcchH--HHcCCCCCCEEE
Confidence 3455788876 3 4567788899999999999999999943 345777775 32 22344434 111225678899
Q ss_pred EEEEeeCCCCchh
Q 014213 335 LFVVGVNPLQDPL 347 (429)
Q Consensus 335 l~v~e~~~~~e~~ 347 (429)
|.+...+|++-|.
T Consensus 85 Lvi~s~~p~~~p~ 97 (118)
T 2daf_A 85 VEIFSTNPDLYPV 97 (118)
T ss_dssp EEEEESCTTTSCC
T ss_pred EEEecCCCccCcc
Confidence 9999888877664
No 333
>2pjh_A Protein NPL4, nuclear protein localization protein 4 homolog; UFD1, NPL4, AAA, protein binding, transport protein; NMR {Mus musculus}
Probab=36.06 E-value=29 Score=26.68 Aligned_cols=43 Identities=2% Similarity=0.040 Sum_probs=32.6
Q ss_pred eeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCCC-CceEEEE
Q 014213 262 KTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPSC-RAVLIKY 304 (429)
Q Consensus 262 ~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~~-~~~~iky 304 (429)
..|.+..-+=+.|+.++.++++.+|.++|.++|+.. ..+.|++
T Consensus 5 m~lRvrs~~G~~Ri~v~~~~t~~~L~~~I~~~~~i~~~~~~l~~ 48 (80)
T 2pjh_A 5 IIIRVQSPDGVKRITATKRETAATFLKKVAKEFGFQNNGFSVYI 48 (80)
T ss_dssp CCCEEECSSEEEECCCCSSCCHHHHHHHHHHHTCCCTTTCCCCC
T ss_pred EEEEEECCCCCEEEEcCCcChHHHHHHHHHHHcCCCCCcceEEe
Confidence 456666666788999999999999999999999643 3344433
No 334
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=35.31 E-value=95 Score=23.97 Aligned_cols=48 Identities=25% Similarity=0.228 Sum_probs=31.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHHhh
Q 014213 122 LLKRARCYEALNRLDLAFRDVTTVLNK------EPKNIMAAEIAERVKKELEKR 169 (429)
Q Consensus 122 l~~rA~ay~~LG~~deAl~~~~kAL~l------~P~n~~a~~~La~l~~~l~e~ 169 (429)
...+|+=|..+|+|+.|+.+|+-++.. .=+++........+...+.++
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~d~~~r~kW~~~~~ei~~E 68 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTHLRQKWQQVWQEINVE 68 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCHHHHHhHHHHHHHHHHH
Confidence 456777788888888888888877753 123555555556666665443
No 335
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=34.88 E-value=68 Score=26.57 Aligned_cols=23 Identities=17% Similarity=0.102 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHH
Q 014213 135 LDLAFRDVTTVLNKEPKNIMAAE 157 (429)
Q Consensus 135 ~deAl~~~~kAL~l~P~n~~a~~ 157 (429)
|..|++.|..++...|.+.....
T Consensus 41 Y~~Aie~l~~alk~e~~~~~~k~ 63 (117)
T 2cpt_A 41 YQHAVQYFLHVVKYEAQGDKAKQ 63 (117)
T ss_dssp HHHHHHHHHHHHHTSCCCHHHHH
T ss_pred HHHHHHHHHHHHHhccCCHHHHH
Confidence 34455555566666766655333
No 336
>2kd0_A LRR repeats and ubiquitin-like domain-containing protein AT2G30105; ubiquitin-like protein, NESG, leucine-rich repeat, structural genomics; NMR {Arabidopsis thaliana}
Probab=34.03 E-value=99 Score=23.46 Aligned_cols=45 Identities=9% Similarity=0.142 Sum_probs=35.7
Q ss_pred ceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEE
Q 014213 261 KKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYR 305 (429)
Q Consensus 261 ~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~ 305 (429)
++.+.+.+++.+..+.++.+.++.+|..+|..+.+. ....+|-|.
T Consensus 12 ~~~~~~~~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrL~~~ 57 (85)
T 2kd0_A 12 TIKLTVKFGGKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFK 57 (85)
T ss_dssp CEEEEEEETTEEEEEEECTTSBHHHHHHHHHHHHCCCTTTCEEEET
T ss_pred cEEEEEEECCEEEEEEECCCCcHHHHHHHHHHHHCcChHHEEEEEC
Confidence 556667778888888999999999999999998842 345677774
No 337
>1wxv_A BAG-family molecular chaperone regulator-1; structural genomics, apoptosis, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=33.38 E-value=1.1e+02 Score=23.35 Aligned_cols=46 Identities=9% Similarity=0.121 Sum_probs=35.8
Q ss_pred CceeEEEEeCCceEEEEccCC-----ccHHHHHHHHHhhCCC-CCceEEEEE
Q 014213 260 PKKTVKLVFGEDIRVAQLPLN-----SSLLQLREVISDRFPS-CRAVLIKYR 305 (429)
Q Consensus 260 ~~~~vK~~~~~DiR~~~i~~~-----~~~~~L~~~v~~kf~~-~~~~~iky~ 305 (429)
.+++|.|.++.....+.++.+ .++.+|..+|..+... ....+|-|+
T Consensus 6 ~~~~v~Vk~~~~~~~i~v~~~~~~~~~TV~~LK~~i~~~~gip~~~qrL~~~ 57 (92)
T 1wxv_A 6 SGLTVTVTHSNEKHDLHVTSQQGSSEPVVQDLAQVVEEVIGVPQSFQKLIFK 57 (92)
T ss_dssp SSEEEEEECSSSEEEEEECCCSSSSSCBHHHHHHHHHHHTCCCTTTCEEEET
T ss_pred CeEEEEEEECCEEEEEEECCCcCcccCcHHHHHHHHHHHHCcCHHHEEEEEC
Confidence 357777777777778888885 9999999999999842 355777786
No 338
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=32.71 E-value=40 Score=26.18 Aligned_cols=31 Identities=13% Similarity=0.104 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 014213 46 QELKEEGNKLFQKRDHGGALLKYEKALKLLP 76 (429)
Q Consensus 46 ~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P 76 (429)
-+....|..|...|+|+.|+.+|+.++....
T Consensus 13 ~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~ 43 (78)
T 2rpa_A 13 VENVKLAREYALLGNYDSAMVYYQGVLDQMN 43 (78)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 3455678888888999999999999988643
No 339
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=32.68 E-value=4.6e+02 Score=30.59 Aligned_cols=48 Identities=8% Similarity=0.010 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYM 94 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~ 94 (429)
+.++.+++.-...+.+=+.+++-..|++.++..|++-+ +|..+-..+.
T Consensus 1105 ~~~e~~rd~~~~~~~k~~~~~~~~~~~~l~~~~P~~l~----~~~~~l~~l~ 1152 (1354)
T 3lxu_X 1105 DYAESFRDFQCSQIVKCELEMAEKIYNDVVAAHPKHLQ----ANLLLIQNIE 1152 (1354)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCTH----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHCCccHH----HHHHHHHhhh
Confidence 56677888777788777888999999999999999876 5554444443
No 340
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=32.43 E-value=89 Score=28.07 Aligned_cols=92 Identities=12% Similarity=-0.009 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCcc-HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCHHH
Q 014213 43 GMSQELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHID-VSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYSKA 121 (429)
Q Consensus 43 ~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~-~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~kA 121 (429)
+.+.-++-.|..++.+++|.+|-..+.+|++..|..... +-.++..+--+.+-+ |+++.- ..++ - +.. ..
T Consensus 12 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~--G~iP~~-~ll~----~-~~~-~~ 82 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLL--GHMPTV-ELLK----K-YHL-MQ 82 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHT--TCEECH-HHHH----H-TTC-GG
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHc--CCCCCH-HHhh----h-Cch-hH
Confidence 555666777888888888888888888888887765521 122333344444555 665532 1121 1 111 24
Q ss_pred HHHHHHHHHHcCC---HHHHHHHHHH
Q 014213 122 LLKRARCYEALNR---LDLAFRDVTT 144 (429)
Q Consensus 122 l~~rA~ay~~LG~---~deAl~~~~k 144 (429)
|..+..|+. .|+ |+.+++..+.
T Consensus 83 y~~L~~Avr-~Gdl~~f~~~l~~~~~ 107 (203)
T 3t5x_A 83 FAEVTRAVS-EGNLLLLHEALAKHEA 107 (203)
T ss_dssp GHHHHHHHH-HTCHHHHHHHHHHTHH
T ss_pred HHHHHHHHH-hCCHHHHHHHHHHhHH
Confidence 666666654 333 4455544443
No 341
>1wx8_A Riken cDNA 4931431F19; ubiquitin-like domain, ubiquilin 1-like, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1
Probab=32.40 E-value=1.1e+02 Score=23.46 Aligned_cols=47 Identities=15% Similarity=0.161 Sum_probs=35.0
Q ss_pred CCceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEE
Q 014213 259 EPKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYR 305 (429)
Q Consensus 259 ~~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~ 305 (429)
..+++|.|........+.++.+.++.+|.++|..+... ....+|-|.
T Consensus 15 ~~~m~i~Vk~~g~~~~~~v~~~~TV~~LK~~I~~~~gip~~~qrL~~~ 62 (96)
T 1wx8_A 15 SRIIRVSVKTPQDCHEFFLAENSNVRRFKKQISKYLHCNADRLVLIFT 62 (96)
T ss_dssp SCEEEEEEECSSSEEEEEEETTCCHHHHHHHHHHHTCSCTTTBCCEET
T ss_pred CCcEEEEEEECCeEEEEEECCCCCHHHHHHHHHHHhCCCHHHEEEEEC
Confidence 45566666654556677899999999999999999842 345667675
No 342
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=32.21 E-value=41 Score=28.62 Aligned_cols=33 Identities=27% Similarity=0.188 Sum_probs=29.0
Q ss_pred HhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 42 IGMSQELKEEGNKLFQKRDHGGALLKYEKALKL 74 (429)
Q Consensus 42 l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel 74 (429)
++.|..|.++|..++.+||+-+|-+.|-+|++.
T Consensus 4 l~lAe~yL~EA~ell~kGD~vQAsEK~ykAaee 36 (129)
T 2jpu_A 4 STSAEVYYEEAEEFLSKGDLVQACEKYYKAAEE 36 (129)
T ss_dssp SCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 356788999999999999999999999888774
No 343
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=31.82 E-value=78 Score=29.49 Aligned_cols=49 Identities=24% Similarity=0.327 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHh-----CCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 014213 62 GGALLKYEKALKL-----LPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLAL 112 (429)
Q Consensus 62 eeAl~~Y~kALel-----~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~AL 112 (429)
+.|...|+.|+.+ .|.++. +-.+..|.+..|+.. .++.++|+..+.+|+
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPi-rLgLaLN~SVF~yEi-l~~~~~A~~lAk~af 200 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPI-RLGLALNFSVFYYEI-LNSPDRACRLAKAAF 200 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHH-HHHHHHHHHHHHHHT-SCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcH-HHHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Confidence 4566677777643 344442 222333444444442 277777777666654
No 344
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=37.68 E-value=10 Score=40.96 Aligned_cols=52 Identities=17% Similarity=0.127 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccc
Q 014213 121 ALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEKRGLR 172 (429)
Q Consensus 121 Al~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e~~~a 172 (429)
+.+.+|...+..|+|..|.+.++.++..+|+|..++..++.++..++.....
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 5677888888999999999999999999999999999999999999765544
No 345
>1v5t_A 8430435I17RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1 PDB: 2kx3_A
Probab=31.26 E-value=59 Score=25.03 Aligned_cols=43 Identities=9% Similarity=0.108 Sum_probs=31.8
Q ss_pred ceeEEEEeCCceEEE-EccCCccHHHHHHHHHhhCCC-CCceEEE
Q 014213 261 KKTVKLVFGEDIRVA-QLPLNSSLLQLREVISDRFPS-CRAVLIK 303 (429)
Q Consensus 261 ~~~vK~~~~~DiR~~-~i~~~~~~~~L~~~v~~kf~~-~~~~~ik 303 (429)
+++|.|.++.....+ .|+.+.++.+|..+|.++... ....+|-
T Consensus 7 ~m~i~Vk~~g~~~~i~~v~~~~TV~~lK~~I~~~~gip~~~QkLi 51 (90)
T 1v5t_A 7 GLPIIVKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLL 51 (90)
T ss_dssp SCCEEEEETTEEEEECSCCSSSBHHHHHHHHHHHTCCCTTTCEEE
T ss_pred eEEEEEEECCEEEEEEEeCCCCCHHHHHHHHHHHHCcCHHHeEEE
Confidence 345555567778778 889999999999999999842 2334444
No 346
>4dwf_A HLA-B-associated transcript 3; ubiquitin-like domain, BAT3 protein, PF00240, structural GEN joint center for structural genomics, JCSG; 1.80A {Homo sapiens} PDB: 1wx9_A
Probab=31.26 E-value=1.1e+02 Score=23.06 Aligned_cols=46 Identities=11% Similarity=0.104 Sum_probs=34.8
Q ss_pred CceeEEEEe-CCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEE
Q 014213 260 PKKTVKLVF-GEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYR 305 (429)
Q Consensus 260 ~~~~vK~~~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~ 305 (429)
.+++|.|.. .+.+..+.|..+.++.+|..+|..+++. ....+|-|.
T Consensus 4 ~~m~i~Vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~gip~~~qrLi~~ 51 (90)
T 4dwf_A 4 DSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQ 51 (90)
T ss_dssp CEEEEEEEETTCCEEEEEEETTCBHHHHHHHHHHHHTCCGGGEEEEET
T ss_pred cEEEEEEEcCCCCEEEEEECCCCCHHHHHHHHHHHhCCCHHHEEEEEC
Confidence 355666665 4567778899999999999999999853 344777774
No 347
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=30.66 E-value=54 Score=25.35 Aligned_cols=19 Identities=11% Similarity=0.252 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHhCCCCH
Q 014213 135 LDLAFRDVTTVLNKEPKNI 153 (429)
Q Consensus 135 ~deAl~~~~kAL~l~P~n~ 153 (429)
|..|++.|..++..+|+..
T Consensus 34 Y~~aie~l~~~lk~e~d~~ 52 (83)
T 2v6y_A 34 YKKAIEVLSQIIVLYPESV 52 (83)
T ss_dssp HHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHHCCCHH
Confidence 3455555666666676554
No 348
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=30.58 E-value=48 Score=25.74 Aligned_cols=18 Identities=6% Similarity=-0.005 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHhCCCCH
Q 014213 136 DLAFRDVTTVLNKEPKNI 153 (429)
Q Consensus 136 deAl~~~~kAL~l~P~n~ 153 (429)
.+|++.|..++..+|+..
T Consensus 43 ~~aie~l~~alk~e~d~~ 60 (83)
T 2w2u_A 43 KKAIEVLAQLVSLYRDGS 60 (83)
T ss_dssp HHHHHHHHHHHHHSTTSS
T ss_pred HHHHHHHHHHHHHCCCHH
Confidence 344445555555566543
No 349
>1wh3_A 59 kDa 2'-5'-oligoadenylate synthetase like protein; P59 OASL, ubiquitin family, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=30.31 E-value=1.7e+02 Score=21.71 Aligned_cols=47 Identities=15% Similarity=0.106 Sum_probs=34.8
Q ss_pred CceeEEEEe-CCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEEC
Q 014213 260 PKKTVKLVF-GEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRD 306 (429)
Q Consensus 260 ~~~~vK~~~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~D 306 (429)
.+++|.|.. ......+.++.+.++.+|..+|.++... ....+|-|..
T Consensus 6 ~~m~i~Vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~gi~~~~qrL~~~G 54 (87)
T 1wh3_A 6 SGIQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPKKQQQLEFQG 54 (87)
T ss_dssp SSEEEEEEETTTEEEEEEECSSSBHHHHHHHHHHHTCCCTTTEEEEETT
T ss_pred CCEEEEEEcCCCCEEEEEeCCCChHHHHHHHHHHHhCCChHHEEEEECC
Confidence 345566654 4567778899999999999999999842 4557777853
No 350
>1f2r_I Inhibitor of caspase-activated DNAse; alpha-beta roll, protein-protein complex, DNA binding protein; NMR {Mus musculus} SCOP: d.15.2.1
Probab=30.15 E-value=81 Score=25.64 Aligned_cols=57 Identities=23% Similarity=0.264 Sum_probs=38.8
Q ss_pred CCCceeEEEEeCCceEEEEccCC-ccHHHHHHHHHhhCCCC---CceEEEEECCCCCEEEecChHHH
Q 014213 258 NEPKKTVKLVFGEDIRVAQLPLN-SSLLQLREVISDRFPSC---RAVLIKYRDEEGDLVTITTDEEL 320 (429)
Q Consensus 258 ~~~~~~vK~~~~~DiR~~~i~~~-~~~~~L~~~v~~kf~~~---~~~~iky~DedgDliti~~~~dl 320 (429)
..+.+++||.-.+|.+ ...+. .|+.+|+.++.++|... ..+.| +.++||-.|. ++|.
T Consensus 15 ~~~~kPfkV~~~~~r~--k~GV~A~SL~EL~~K~~~~l~l~~~~~~~~l-vLeeDGT~Vd---dEeY 75 (100)
T 1f2r_I 15 VRPLKPCLLRRNHSRD--QHGVAASSLEELRSKACELLAIDKSLTPITL-VLAEDGTIVD---DDDY 75 (100)
T ss_dssp SCCCEEEEEEETTEEE--EEEEEESSHHHHHHHHHHHHCCCGGGCSCEE-EESSSCCBCC---SSSS
T ss_pred CCCCCCEEEeeCCCcc--EEeEEcCCHHHHHHHHHHHhccCCCCCceEE-EEeeCCcEEe---chhH
Confidence 4567999999555544 34444 58999999999999753 23444 4567896653 5554
No 351
>3n3k_B Ubiquitin; hydrolase, protease, thiol protease, DUB, zinc ribbon, inhibitor, ubiqu acetylation, cytoplasm, isopeptide bond, nucleus; 2.60A {Homo sapiens} SCOP: d.15.1.1
Probab=30.14 E-value=63 Score=23.91 Aligned_cols=45 Identities=4% Similarity=0.013 Sum_probs=33.4
Q ss_pred eeEEEEe-CCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEEC
Q 014213 262 KTVKLVF-GEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRD 306 (429)
Q Consensus 262 ~~vK~~~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~D 306 (429)
++|.|.. ...+..+.++.+.++.+|.+.|..++.. ....+|-|..
T Consensus 4 m~i~vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~~ip~~~qrL~~~g 50 (85)
T 3n3k_B 4 MRIVVKTLMGRTIILEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 50 (85)
T ss_dssp CEEEEECGGGCEEEEECCTTCBHHHHHHHHHHHHCCCGGGEEEEETB
T ss_pred EEEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHHCCCHHHEEEEECC
Confidence 3455553 4466778899999999999999999843 3457888854
No 352
>1wgg_A Ubiquitin carboxyl-terminal hydrolase 14; ubiquitin specific protease 14, USP14, ubiquitin-like fold, structural genomics; NMR {Mus musculus} SCOP: d.15.1.1
Probab=30.03 E-value=84 Score=24.60 Aligned_cols=44 Identities=7% Similarity=0.013 Sum_probs=33.4
Q ss_pred ceeEEEEeCCceE-EEEccCCccHHHHHHHHHhhCCC-CCceEEEE
Q 014213 261 KKTVKLVFGEDIR-VAQLPLNSSLLQLREVISDRFPS-CRAVLIKY 304 (429)
Q Consensus 261 ~~~vK~~~~~DiR-~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky 304 (429)
+++|+|.++.... -+.|+.+.++.+|..+|.++... ....+|-|
T Consensus 7 ~m~i~Vk~~g~~~~~l~v~~~~TV~~lK~~I~~~tgip~~~QkLi~ 52 (96)
T 1wgg_A 7 GYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMV 52 (96)
T ss_dssp EEEEEEEETTEEEEEEEEESSSCHHHHHHHHHHHTCCCTTTSCCEE
T ss_pred EEEEEEEECCEEEEEEEECCCCcHHHHHHHHHHHHCcCHHHeEEEE
Confidence 5667777788888 48899999999999999999842 23344445
No 353
>2kvz_A ISPE; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Listeria monocytogenes}
Probab=29.82 E-value=40 Score=26.55 Aligned_cols=20 Identities=25% Similarity=0.423 Sum_probs=16.0
Q ss_pred CCCCCceEEEEECCCCCEEE
Q 014213 294 FPSCRAVLIKYRDEEGDLVT 313 (429)
Q Consensus 294 f~~~~~~~iky~DedgDlit 313 (429)
|...+++.|+|.|++|--|.
T Consensus 3 ~~k~~~VtV~YvDe~Gn~La 22 (85)
T 2kvz_A 3 FGKPNQVTVNYLDENNTSIA 22 (85)
T ss_dssp SSCCCCEEEEEECSSSCEEE
T ss_pred cccCCeEEEEEECCCCCCCC
Confidence 55678899999999996443
No 354
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=29.80 E-value=1.1e+02 Score=31.03 Aligned_cols=27 Identities=15% Similarity=-0.006 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 014213 121 ALLKRARCYEALNRLDLAFRDVTTVLN 147 (429)
Q Consensus 121 Al~~rA~ay~~LG~~deAl~~~~kAL~ 147 (429)
|+-.+|++|..+++|++|...+++++.
T Consensus 193 A~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 193 VNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 444444444444555555555554443
No 355
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=29.72 E-value=66 Score=25.90 Aligned_cols=39 Identities=5% Similarity=0.025 Sum_probs=29.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 014213 123 LKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAER 161 (429)
Q Consensus 123 ~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~ 161 (429)
..+|..+...|+++.|+.+|-+|+.+.|.-...+..+.+
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~q~ 62 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQ 62 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 456888888899999999888899888765555555443
No 356
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=29.70 E-value=1.2e+02 Score=30.99 Aligned_cols=32 Identities=13% Similarity=0.040 Sum_probs=25.1
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 117 LYSKALLKRARCYEALNRLDLAFRDVTTVLNK 148 (429)
Q Consensus 117 ~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l 148 (429)
.-.-|+..+|++|...++|++|...+++++..
T Consensus 180 tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 180 TKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34557778888888888888888888888863
No 357
>3mtn_B UBA80, ubcep1, ubiquitin variant UBV.21.4; ubiquitin-specific protease activity, hydrolase, ubiquitin B structural genomics consortium, SGC; 2.70A {Homo sapiens} SCOP: d.15.1.1
Probab=29.57 E-value=85 Score=23.11 Aligned_cols=45 Identities=4% Similarity=0.003 Sum_probs=33.7
Q ss_pred eeEEEEe-CCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEEC
Q 014213 262 KTVKLVF-GEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRD 306 (429)
Q Consensus 262 ~~vK~~~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~D 306 (429)
+.|.|.. ...+..+.++.+.++.+|.++|..++.. ....+|-|..
T Consensus 4 m~i~vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~~i~~~~qrL~~~g 50 (85)
T 3mtn_B 4 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 50 (85)
T ss_dssp EEEEEECTTSCEEEEEECTTCBHHHHHHHHHHHHCCCGGGCEEEETT
T ss_pred EEEEEEcCCCCEEEEEECCCCCHHHHHHHHHHHHCcChHHEEEEECC
Confidence 4555554 4467778899999999999999999843 3457777854
No 358
>3kyd_D Small ubiquitin-related modifier 1; SUMO, thioester, adenylation, inhibitor, TETR intermediate, ligase, nucleus, phosphoprotein; HET: VMX; 2.61A {Homo sapiens} SCOP: d.15.1.1
Probab=29.50 E-value=46 Score=27.68 Aligned_cols=72 Identities=14% Similarity=0.181 Sum_probs=49.0
Q ss_pred CCceeEEEEeC-CceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEEEecCh-HHHHHHHHhhccCCcEEE
Q 014213 259 EPKKTVKLVFG-EDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLVTITTD-EELRWAEASAEMQGSVRL 335 (429)
Q Consensus 259 ~~~~~vK~~~~-~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDliti~~~-~dl~~a~~~~~~~~~~rl 335 (429)
...++|||.-. .....|.|-.+..|.-|++...++.+. ...+++.| ||+.|.=.++ +||.| .....|.+
T Consensus 38 ~~~I~LKV~~qdg~ev~fkIk~tt~L~KLm~aY~er~Gl~~~~irFlF---DG~rI~~~~TP~dL~M-----EDgD~IdV 109 (115)
T 3kyd_D 38 GEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLF---EGQRIADNHTPKELGM-----EEEDVIEV 109 (115)
T ss_dssp -CEEEEEEECTTSCEEEEEEETTSCTHHHHHHHHHHHTCCTTSEEEEE---TTEECCTTCCTTTTTC-----CTTCEEEE
T ss_pred CCeEEEEEEcCCCCEEEEEEccCChHHHHHHHHHHHhCCChhhEEEEE---CCeECCCCCCHHHcCC-----CCCCEEEE
Confidence 56889999842 223467789999999999999999953 45577777 7888765543 55543 23345666
Q ss_pred EEE
Q 014213 336 FVV 338 (429)
Q Consensus 336 ~v~ 338 (429)
++.
T Consensus 110 ~~~ 112 (115)
T 3kyd_D 110 YQE 112 (115)
T ss_dssp EEC
T ss_pred Eee
Confidence 654
No 359
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=29.42 E-value=1.3e+02 Score=30.28 Aligned_cols=51 Identities=16% Similarity=0.059 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhCCCCC-------------------ccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 014213 61 HGGALLKYEKALKLLPRNH-------------------IDVSYLRSNMAACYMQMGLSEYPRAIHECNLALE 113 (429)
Q Consensus 61 yeeAl~~Y~kALel~P~~~-------------------~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALe 113 (429)
|+..+..++.|+.+.|... .....++..+|.+|+-+ ++|++|+..++.+|.
T Consensus 156 y~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~~r~tk~aA~allarvyL~~--~~~~~A~~~a~~vi~ 225 (478)
T 3hdx_A 156 LSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQGKLFNKLSAYSVLAHICAWQ--GNYAEAETYSAFIID 225 (478)
T ss_dssp HHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTTTSCCHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCccccccccccccccccccHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHh
Confidence 4455566677777776422 11234555566666666 666666666666654
No 360
>3msv_A Nuclear import adaptor, NRO1; helix repeats, heat repeats, protein binding; 2.18A {Schizosaccharomyces pombe}
Probab=29.07 E-value=4.1e+02 Score=25.90 Aligned_cols=122 Identities=18% Similarity=0.099 Sum_probs=72.9
Q ss_pred HHHHHHHHHH---HHcCC-------HHHHHHHHHHHHHhCCCCC--ccHHHHHHHHHH-----HH--HHcCCC-------
Q 014213 46 QELKEEGNKL---FQKRD-------HGGALLKYEKALKLLPRNH--IDVSYLRSNMAA-----CY--MQMGLS------- 99 (429)
Q Consensus 46 ~~lk~~Gn~l---f~~gd-------yeeAl~~Y~kALel~P~~~--~~~a~l~~nrA~-----~y--~kl~~g------- 99 (429)
.+|+-+=..| +..++ ...-+-.+++.|+...... ++...+-+.+|. .. ...+.+
T Consensus 67 sQLkgLwktyrekl~Sdri~dnElLLNGIIHECDRLLRn~e~~~~Lp~~FhAIYAlALl~lSELa~~a~Fk~ede~~V~e 146 (393)
T 3msv_A 67 SQLWGLYEMSREKLENDDIDASVSLVFGTIHEADRILRNTEDISTLPKDFHAAYSSALLAVSELFEIAQKRLKETNTEES 146 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCSCGGGSCHHHHHHHHHHHHHHHHTHHHHGGGSCSSCCHHH
T ss_pred HHHHHHHHHHHHhhcccccccchHHhcchHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHhHHHhccCchhhhHHH
Confidence 4455555566 88888 4456667788888554211 122222222222 11 011112
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 014213 100 EYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELE 167 (429)
Q Consensus 100 ~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~ 167 (429)
=|+.|++-++..++..|+.....+.++.++...=+.-.+-..-..-+.-.|-...+...+..+..-+.
T Consensus 147 fFDaALERielGLe~~p~s~~L~la~sKIllqrI~~v~~~~s~eE~~~~~p~~~ta~kmi~qa~~~l~ 214 (393)
T 3msv_A 147 YIDAAIERAQLGLDAPGNESRLFLALARAYLEKVRVLVWRHDNEESLANIPVTQLVNPYIEKAIQYLR 214 (393)
T ss_dssp HHHHHHHHHHHHTTSCSCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhCCCChhHHHHHHHHHHHHHHHHHHhcccccccccCchHHHHHHHHHHHHHHHH
Confidence 26778888888888899999888888888876555444444444444555666777777777776665
No 361
>2dzi_A Ubiquitin-like protein 4A; GDX, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.55 E-value=1.7e+02 Score=21.20 Aligned_cols=45 Identities=11% Similarity=0.238 Sum_probs=32.8
Q ss_pred ceeEEEE-eCCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEE
Q 014213 261 KKTVKLV-FGEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYR 305 (429)
Q Consensus 261 ~~~vK~~-~~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~ 305 (429)
+++|.|. .++....+.++.+.+..+|.++|..+++. ....+|-|.
T Consensus 7 ~m~i~vk~~~g~~~~~~v~~~~tV~~LK~~i~~~~~i~~~~qrL~~~ 53 (81)
T 2dzi_A 7 GMQLTVKALQGRECSLQVPEDELVSTLKQLVSEKLNVPVRQQRLLFK 53 (81)
T ss_dssp SEEEEEEETTSCEEEEEECSSCBHHHHHHHHHHHTCCCTTTCEEEET
T ss_pred cEEEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHHCcCHHHEEEEEC
Confidence 3444444 34566677899999999999999999853 355777775
No 362
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=28.44 E-value=3.5e+02 Score=30.92 Aligned_cols=75 Identities=11% Similarity=-0.023 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCCCHHHH
Q 014213 83 SYLRSNMAACYMQMGLSEYPRAIHECNLALEV----TPLYSKALLKRARCYEALNRLDLAFRDVTTVLN--KEPKNIMAA 156 (429)
Q Consensus 83 a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel----dP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~--l~P~n~~a~ 156 (429)
-..|+.+-.+|.+. |+.++|...+....+. -.-+...|..+-..|...|++++|++.|++... +.|+-....
T Consensus 127 ~~TynaLIdglcK~--G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYn 204 (1134)
T 3spa_A 127 QQRLLAFFKCCLLT--DQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYA 204 (1134)
T ss_dssp HHHHHHHHHHHHHH--TCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred HHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 34577788889998 9999999999764322 233678899999999999999999999999876 467655443
Q ss_pred HHH
Q 014213 157 EIA 159 (429)
Q Consensus 157 ~~L 159 (429)
..+
T Consensus 205 tLI 207 (1134)
T 3spa_A 205 AAL 207 (1134)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 363
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=28.16 E-value=97 Score=29.38 Aligned_cols=50 Identities=26% Similarity=0.218 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhC----CCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 014213 62 GGALLKYEKALKLL----PRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALE 113 (429)
Q Consensus 62 eeAl~~Y~kALel~----P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALe 113 (429)
+.|...|+.|+.+. |.++ -+-.+..|.+..|+.. .++.++|+..+.+|+.
T Consensus 173 e~a~~aY~~A~~iA~~L~pthP-irLGLaLNfSVFyYEi-ln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHP-IRLGLALNFSVFHYEI-LNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCH-HHHHHHHHHHHHHHHT-SCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCc-HHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Confidence 46777888887643 3333 2223334445444442 2777777777777653
No 364
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=27.93 E-value=2.3e+02 Score=28.20 Aligned_cols=112 Identities=13% Similarity=0.066 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHH-HHH--------------HH-HHcCCCCHHHHHHHHHH
Q 014213 47 ELKEEGNKLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSN-MAA--------------CY-MQMGLSEYPRAIHECNL 110 (429)
Q Consensus 47 ~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~n-rA~--------------~y-~kl~~g~y~eAi~~~~~ 110 (429)
.+-.+|+.+...|+...|.-+|--|= +.+....+|.. +-. ++ ..| .++-+=+..|..
T Consensus 250 Lc~~LG~RL~~~g~~~~A~lCYi~Ag-----~~dk~v~iW~~~~~~~~~~~~~~~~s~~~~~~~~L--qe~iEkv~vl~~ 322 (399)
T 2pm7_A 250 MMIKLGDRMKENGHRQDSLTLYLAAG-----SLDKVASIWLSEFPDLEDKLKKDNKTIYEAHSECM--TEFIERFTVFSN 322 (399)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHT-----CHHHHHHHHHHSHHHHHHHHHHTTCCHHHHHHHHH--HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCChhhhhHHHHhhC-----CHHHHHHHHHHhcchhhhccccccCCcccccHHHH--HHHHHHHHHHHH
Confidence 34578999999999999999996652 21112223322 100 00 001 111112223333
Q ss_pred HHHhC-----CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 014213 111 ALEVT-----PLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEPKNIMAAEIAERVKKELEK 168 (429)
Q Consensus 111 ALeld-----P~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P~n~~a~~~La~l~~~l~e 168 (429)
++... +.....+...|..+...|+++.|+++++.. -.+++.+.....+++...+.
T Consensus 323 a~~~~~~~~~~~l~~~~~eYA~lLA~qG~l~~A~~yL~~l---p~~~~~~~~lr~Rl~~a~~~ 382 (399)
T 2pm7_A 323 FINGSSTINNEQLIAKFLEFINLTTSTGNFELATEFLNSL---PSDNEEVKTEKARVLIASGK 382 (399)
T ss_dssp TSCC---CCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHS---CTTCHHHHHHHHHHHHHHC-
T ss_pred HHhcCCCcCcHHHHHHHHHHHHHHHhCCCHHHHHHHHHhC---CCCChhHHHHHHHHHHhcCC
Confidence 33211 113345677799999999999999998732 22556677777777776643
No 365
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=27.89 E-value=98 Score=29.32 Aligned_cols=48 Identities=25% Similarity=0.308 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHh-----CCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 014213 62 GGALLKYEKALKL-----LPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLA 111 (429)
Q Consensus 62 eeAl~~Y~kALel-----~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~A 111 (429)
+.|...|+.|+.+ .|.++. +-.+..|.+..|+.. .++.++|+..+.+|
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPi-rLGLaLNfSVFyYEi-ln~~~~Ac~lAk~A 204 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPI-RLGLALNFSVFYYEI-LNSPDRACNLAKQA 204 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHH-HHHHHHHHHHHHHHT-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHH-ccCHHHHHHHHHHH
Confidence 4566677777643 344442 222333444444442 26777777666655
No 366
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.86 E-value=26 Score=29.39 Aligned_cols=43 Identities=19% Similarity=0.153 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 014213 100 EYPRAIHECNLALEVTPLYSKALLKRARCYEALNRLDLAFRDVTTVLNKEP 150 (429)
Q Consensus 100 ~y~eAi~~~~~ALeldP~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l~P 150 (429)
.|.+|..+.++||.+|-. +.--.++.-|..++..++++|.+..
T Consensus 18 ~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~ 60 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISS 60 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccc
Confidence 467777777777777641 3333444445555666666776655
No 367
>3a9j_A Ubiquitin; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 3a1q_B 2znv_B 3a9k_A 3h7p_A 3jsv_A 3dvg_Y 3dvn_Y 3nob_A 2o6v_D* 3jw0_X 3jvz_X 3nhe_B* 1aar_A 1d3z_A 1f9j_A 1fxt_B 1g6j_A 1nbf_C 1cmx_B 1q5w_B ...
Probab=27.75 E-value=1.2e+02 Score=21.55 Aligned_cols=42 Identities=5% Similarity=0.014 Sum_probs=31.5
Q ss_pred EEEEe-CCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEE
Q 014213 264 VKLVF-GEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYR 305 (429)
Q Consensus 264 vK~~~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~ 305 (429)
|.|.. ++....+.++.+.++.+|...|..++.. ....++.|.
T Consensus 3 i~vk~~~g~~~~i~v~~~~tv~~lK~~i~~~~~i~~~~q~L~~~ 46 (76)
T 3a9j_A 3 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 (76)
T ss_dssp EEEEETTSCEEEEECCTTCBHHHHHHHHHHHHCCCGGGEEEEET
T ss_pred EEEEcCCCCEEEEEECCCCcHHHHHHHHHHHHCcCHHHeEEEEC
Confidence 34433 4566677899999999999999999843 355888885
No 368
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=27.67 E-value=1.3e+02 Score=30.68 Aligned_cols=14 Identities=7% Similarity=0.074 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHc
Q 014213 83 SYLRSNMAACYMQM 96 (429)
Q Consensus 83 a~l~~nrA~~y~kl 96 (429)
+-+++.||.+|+.|
T Consensus 119 gEA~flRA~~Yf~L 132 (495)
T 3lew_A 119 GQALALRGFLYLHL 132 (495)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45566666666654
No 369
>3rui_B Autophagy-related protein 8; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} SCOP: d.15.1.3 PDB: 2kq7_A 2zpn_A 3vxw_A 2kwc_A 2li5_A 3vh3_B 3vh4_B*
Probab=27.64 E-value=67 Score=26.76 Aligned_cols=25 Identities=28% Similarity=0.268 Sum_probs=21.7
Q ss_pred ceEEEEccCCccHHHHHHHHHhhCC
Q 014213 271 DIRVAQLPLNSSLLQLREVISDRFP 295 (429)
Q Consensus 271 DiR~~~i~~~~~~~~L~~~v~~kf~ 295 (429)
|-..+.||.+.++.+|+..||+++.
T Consensus 47 dk~KflVp~~~tv~qf~~~iRkrl~ 71 (118)
T 3rui_B 47 DKRKYLVPADLTVGQFVYVIRKRIM 71 (118)
T ss_dssp SCCEEEEETTSBHHHHHHHHHHHTT
T ss_pred ccceEEcCCCCCHHHHHHHHHHHhC
Confidence 4556679999999999999999984
No 370
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=27.53 E-value=1e+02 Score=28.80 Aligned_cols=49 Identities=20% Similarity=0.224 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHH-----hCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 014213 62 GGALLKYEKALK-----LLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLAL 112 (429)
Q Consensus 62 eeAl~~Y~kALe-----l~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~AL 112 (429)
+.|...|+.|+. +.|.++. +-.+..|.+..|+.. .++.++|+..+.+|+
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPi-rLGLaLNfSVFyyEi-ln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPI-RLGLALNFSVFHYEI-ANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHH-HHHHHHHHHHHHHHT-SSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcH-HHHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Confidence 456666776654 2344442 222233344444432 266666666665553
No 371
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=27.49 E-value=83 Score=31.60 Aligned_cols=14 Identities=14% Similarity=0.297 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHc
Q 014213 83 SYLRSNMAACYMQM 96 (429)
Q Consensus 83 a~l~~nrA~~y~kl 96 (429)
+-+++.||.+|+.|
T Consensus 111 gEa~flRA~~yf~L 124 (454)
T 3myv_A 111 GETMAVIALCQFDL 124 (454)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34555566666554
No 372
>1o3u_A Conserved hypothetical protein TM0613; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.75A {Thermotoga maritima} SCOP: a.24.16.3
Probab=27.44 E-value=2.2e+02 Score=23.51 Aligned_cols=34 Identities=9% Similarity=-0.003 Sum_probs=27.4
Q ss_pred HhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 014213 42 IGMSQELKEEGNKLFQKRDHGGALLKYEKALKLL 75 (429)
Q Consensus 42 l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~ 75 (429)
.++|......+..++..|.|+.|....++|++..
T Consensus 13 ~~~A~~dL~~A~~~l~~g~y~~a~F~aqQA~Eka 46 (135)
T 1o3u_A 13 MDAAKDDLEHAKHDLEHGFYNWACFSSQQAAEKA 46 (135)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHH
Confidence 3677788888989999999998888777777654
No 373
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=27.29 E-value=1.6e+02 Score=22.61 Aligned_cols=54 Identities=20% Similarity=0.271 Sum_probs=39.5
Q ss_pred ceEEEE--ccCCccHHHHHHHHHhhCCCCCceEEEEECC-CCC-----EEEecChHHHHHHHHh
Q 014213 271 DIRVAQ--LPLNSSLLQLREVISDRFPSCRAVLIKYRDE-EGD-----LVTITTDEELRWAEAS 326 (429)
Q Consensus 271 DiR~~~--i~~~~~~~~L~~~v~~kf~~~~~~~iky~De-dgD-----liti~~~~dl~~a~~~ 326 (429)
.++.++ ||.+++-.+|.+.+. +|+....+.|-. |. .|- +|++.+.++-..|+..
T Consensus 19 gt~lfV~nLp~~~te~~L~~~F~-~~G~I~~v~i~~-d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 19 GTNLIVNYLPQNMTQDELRSLFS-SIGEVESAKLIR-DKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp CSEEEEESCCTTCCHHHHHHHHH-TTSCEEEEEEEE-CSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHH-hcCCEEEeEeee-cCCCCcccccEEEEECCHHHHHHHHHH
Confidence 334444 999999999988775 576666666653 43 353 7999999999999874
No 374
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=26.91 E-value=1.3e+02 Score=30.29 Aligned_cols=19 Identities=16% Similarity=-0.064 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHhhcc
Q 014213 153 IMAAEIAERVKKELEKRGL 171 (429)
Q Consensus 153 ~~a~~~La~l~~~l~e~~~ 171 (429)
..++..+++++.-+++...
T Consensus 196 ~aa~allArvyL~~~~~~~ 214 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNE 214 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHhCCHHH
Confidence 4566677777665554433
No 375
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=26.36 E-value=1.1e+02 Score=28.78 Aligned_cols=48 Identities=21% Similarity=0.225 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHH-----hCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 014213 62 GGALLKYEKALK-----LLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLA 111 (429)
Q Consensus 62 eeAl~~Y~kALe-----l~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~A 111 (429)
+.|...|+.|+. +.|.++. +-.+..|.+..|+.. .++.++|+..+..|
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPi-rLGLaLNfSVFyYEI-ln~~~~Ac~lAk~A 200 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPI-RLGLALNYSVFYYEI-QNAPEQACHLAKTA 200 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHH-HHHHHHHHHHHHHHT-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcH-HHHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Confidence 456666666654 2334442 222233344444432 26666666655554
No 376
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=26.34 E-value=91 Score=26.76 Aligned_cols=43 Identities=16% Similarity=0.265 Sum_probs=35.0
Q ss_pred hHHHHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CCCCCc
Q 014213 38 TEVFIGMSQELKEEGNKLFQKRDHGGALLKYEKALKL----LPRNHI 80 (429)
Q Consensus 38 ~~~~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel----~P~~~~ 80 (429)
-...+..|..+...|..|...|+++.|.-.|-+++.+ .|.++.
T Consensus 33 l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~IpkHpd 79 (146)
T 2xze_A 33 PRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRD 79 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGGGSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHcccCcc
Confidence 3446799999999999999999999999999886554 465553
No 377
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=25.85 E-value=2.1e+02 Score=22.11 Aligned_cols=21 Identities=14% Similarity=-0.010 Sum_probs=10.5
Q ss_pred HHHHHHcCCHHHHHHHHHHHH
Q 014213 126 ARCYEALNRLDLAFRDVTTVL 146 (429)
Q Consensus 126 A~ay~~LG~~deAl~~~~kAL 146 (429)
|.-+-..|+|++|+..|..++
T Consensus 23 Ave~D~~g~y~eAl~lY~~Ai 43 (86)
T 4a5x_A 23 AVELDSESRYPQALVCYQEGI 43 (86)
T ss_dssp HHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHH
Confidence 333345555555555555444
No 378
>1j8c_A Ubiquitin-like protein hplic-2; ubiquitin-like domain, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=25.70 E-value=1.5e+02 Score=24.33 Aligned_cols=46 Identities=26% Similarity=0.340 Sum_probs=33.7
Q ss_pred CceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEE
Q 014213 260 PKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYR 305 (429)
Q Consensus 260 ~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~ 305 (429)
.+++|.|........+.|+.+.++.+|..+|..+++. ....+|-|.
T Consensus 31 ~~m~I~Vk~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~QrLi~~ 77 (125)
T 1j8c_A 31 KIIKVTVKTPKEKEEFAVPENSSVQQFKEAISKRFKSQTDQLVLIFA 77 (125)
T ss_dssp CCEEEEEECSSCEEEEEECTTCCHHHHHHHHHHHHCSCSSSEEEEET
T ss_pred CcEEEEEEeCCeEEEEEECCCCcHHHHHHHHHHHHCcCcceEEEEEC
Confidence 3445555543556677899999999999999999853 455777775
No 379
>2dzm_A FAS-associated factor 1; ubiquitin-like domain, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.26 E-value=97 Score=24.78 Aligned_cols=36 Identities=3% Similarity=0.133 Sum_probs=31.8
Q ss_pred CceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCC
Q 014213 260 PKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFP 295 (429)
Q Consensus 260 ~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~ 295 (429)
+++.+++.+...+..+.|+.+.+..+|..+|.++.+
T Consensus 8 ~m~~~~vk~~Gk~~~v~v~~~~TV~~LK~~I~~~tg 43 (100)
T 2dzm_A 8 RMLDFRVEYRDRNVDVVLEDTCTVGEIKQILENELQ 43 (100)
T ss_dssp CEEEEEEECSSCEEEEEEETTSBHHHHHHHHHHHHC
T ss_pred ceEEEEEEeCCeEEEEEECCCCcHHHHHHHHHHHHC
Confidence 467788888888888999999999999999999984
No 380
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=25.09 E-value=2e+02 Score=22.31 Aligned_cols=49 Identities=14% Similarity=0.105 Sum_probs=39.8
Q ss_pred ccCCccHHHHHHHHHhhCCCCCceEEEEECCCC-----CEEEecChHHHHHHHHh
Q 014213 277 LPLNSSLLQLREVISDRFPSCRAVLIKYRDEEG-----DLVTITTDEELRWAEAS 326 (429)
Q Consensus 277 i~~~~~~~~L~~~v~~kf~~~~~~~iky~Dedg-----Dliti~~~~dl~~a~~~ 326 (429)
||.+++-.+|.+.+. +|+....+.|.+....| =+|++.+.++...|+..
T Consensus 33 Lp~~~t~~~l~~~F~-~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 86 (115)
T 2cpz_A 33 LPQEFGDQDLLQMFM-PFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQS 86 (115)
T ss_dssp CCSSCCHHHHHHHHG-GGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH-hcCCeEEEEEEECCCCCCcCccEEEEECCHHHHHHHHHH
Confidence 899999999998886 67777788877654455 48999999999999864
No 381
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=25.08 E-value=2.8e+02 Score=24.24 Aligned_cols=58 Identities=10% Similarity=-0.075 Sum_probs=44.4
Q ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHhCCCC------HHHHHH-HHHHH--HHcCCHHHHHHHHHHHHHh
Q 014213 89 MAACYMQMGLSEYPRAIHECNLALEVTPLY------SKALLK-RARCY--EALNRLDLAFRDVTTVLNK 148 (429)
Q Consensus 89 rA~~y~kl~~g~y~eAi~~~~~ALeldP~~------~kAl~~-rA~ay--~~LG~~deAl~~~~kAL~l 148 (429)
.+..++.. |+|-+|.+.++.+-...+.. ..++.. +|.++ ...|+..-|...+.+++..
T Consensus 38 ~~i~lFn~--g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 38 HGVRLYNS--GEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHT--TCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhC--CCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 45666666 99999999999988776554 456666 65544 5679999999999999873
No 382
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=24.87 E-value=87 Score=24.67 Aligned_cols=18 Identities=11% Similarity=0.067 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHhCCCCH
Q 014213 136 DLAFRDVTTVLNKEPKNI 153 (429)
Q Consensus 136 deAl~~~~kAL~l~P~n~ 153 (429)
..|++.|..++..+|+..
T Consensus 39 ~~Aie~l~~alk~e~~~~ 56 (93)
T 1wfd_A 39 QEGIDMLLQVLKGTKESS 56 (93)
T ss_dssp HHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHHHHHHHHCCCHH
Confidence 444555555555565543
No 383
>1wx7_A Ubiquilin 3; ubiquitin-like domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=24.74 E-value=1.7e+02 Score=22.91 Aligned_cols=47 Identities=19% Similarity=0.215 Sum_probs=34.3
Q ss_pred CCceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEE
Q 014213 259 EPKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYR 305 (429)
Q Consensus 259 ~~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~ 305 (429)
..+++|.|........+.|..+.++.+|..+|..++.. ....+|-|.
T Consensus 15 ~~~m~I~Vk~~~g~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrLi~~ 62 (106)
T 1wx7_A 15 PHLIKVTVKTPKDKEDFSVTDTCTIQQLKEEISQRFKAHPDQLVLIFA 62 (106)
T ss_dssp SSEEEEEEECSSCEEEEEEETTCCHHHHHHHHHHHHTCCTTTEEEEET
T ss_pred CceEEEEEEeCCCcEEEEECCCCcHHHHHHHHHHHHCcChhhEEEEEC
Confidence 34566666654444567789999999999999999843 455778775
No 384
>2zjd_A Microtubule-associated proteins 1A/1B light chain 3B precursor; autophagy, LC3, microtubule-associated protein 1 light chain 3, cytoplasm, cytoplasmic vesicle, lipoprotein; 1.56A {Homo sapiens} SCOP: d.15.1.3 PDB: 2z0e_B 2zzp_B 2z0d_B 1ugm_A 1v49_A 2k6q_A 3eci_A
Probab=24.41 E-value=47 Score=28.20 Aligned_cols=36 Identities=17% Similarity=0.251 Sum_probs=26.2
Q ss_pred ceEEEEccCCccHHHHHHHHHhhCC--CCCceEEEEEC
Q 014213 271 DIRVAQLPLNSSLLQLREVISDRFP--SCRAVLIKYRD 306 (429)
Q Consensus 271 DiR~~~i~~~~~~~~L~~~v~~kf~--~~~~~~iky~D 306 (429)
|-..+.||.+.++.+|+..||+++. ...++=+-|-+
T Consensus 53 dk~KflVp~~~tv~qf~~~iRkrL~l~~~~alFl~~vn 90 (130)
T 2zjd_A 53 DKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNG 90 (130)
T ss_dssp SCCEEEEETTCBHHHHHHHHHHHHTCCTTCCEEEEETT
T ss_pred cccEEEcCCCCcHHHHHHHHHHHhCCCCCceEEEEEEC
Confidence 3466679999999999999999983 33444443444
No 385
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.34 E-value=2e+02 Score=23.90 Aligned_cols=44 Identities=16% Similarity=0.079 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCC
Q 014213 60 DHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPL 117 (429)
Q Consensus 60 dyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~ 117 (429)
.|.+|..+..+||.++..... -.| + .-|.++|..+.++|.+..+
T Consensus 18 ~h~~AF~~Is~AL~~DE~g~k-------~~A-----l--~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDELGQK-------EEA-----K--NYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHTCH-------HHH-----H--HHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHhhhhhcCCH-------HHH-----H--HHHHHHHHHHHHhcccccc
Confidence 355666666666666653221 111 1 2355667777777777653
No 386
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=24.25 E-value=1e+02 Score=31.21 Aligned_cols=52 Identities=13% Similarity=0.103 Sum_probs=37.0
Q ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 014213 88 NMAACYMQMGLSEYPRAIHECNLALEVTP--------LYSKALLKRARCYEALNRLDLAFRDVTTVLN 147 (429)
Q Consensus 88 nrA~~y~kl~~g~y~eAi~~~~~ALeldP--------~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~ 147 (429)
....+|-.+ +.+++.|+..-| .-.-|+..+|++|..+++|++|...+++++.
T Consensus 149 ~~~evy~~I--------~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 149 SQADIWAQA--------KEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp CHHHHHHHH--------HHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred CHHHHHHHH--------HHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 355666554 555555555433 2345788889999999999999999998874
No 387
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.94 E-value=2e+02 Score=21.72 Aligned_cols=49 Identities=27% Similarity=0.352 Sum_probs=40.5
Q ss_pred ccCCccHHHHHHHHHhhCCCCCceEEEEECCCC-----CEEEecChHHHHHHHHh
Q 014213 277 LPLNSSLLQLREVISDRFPSCRAVLIKYRDEEG-----DLVTITTDEELRWAEAS 326 (429)
Q Consensus 277 i~~~~~~~~L~~~v~~kf~~~~~~~iky~Dedg-----Dliti~~~~dl~~a~~~ 326 (429)
||.+++-.+|.+.+...|+....+.|.+ |..| =+|++.+.++...|+..
T Consensus 17 Lp~~~t~~~l~~~F~~~~G~v~~v~i~~-~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 17 LTPDVDDGMLYEFFVKVYPSCRGGKVVL-DQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp CCTTCCHHHHHHHHHHHCTTEEEEEEEE-CTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhCCCeEEEEEEE-CCCCCccceEEEEECCHHHHHHHHHH
Confidence 8999999999999988788777777754 3366 37999999999999884
No 388
>2klc_A Ubiquilin-1; ubiquitin-like, structural genomics, PSI-2, protein structur initiative, northeast structural genomics consortium, NESG; NMR {Homo sapiens}
Probab=23.84 E-value=1.7e+02 Score=22.84 Aligned_cols=46 Identities=26% Similarity=0.331 Sum_probs=33.7
Q ss_pred CceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEE
Q 014213 260 PKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYR 305 (429)
Q Consensus 260 ~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~ 305 (429)
..++|.|........+.++.+.++.+|..+|..+.+. ....+|-|.
T Consensus 24 ~~m~I~Vk~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrLi~~ 70 (101)
T 2klc_A 24 KIMKVTVKTPKEKEEFAVPENSSVQQFKEEISKRFKSHTDQLVLIFA 70 (101)
T ss_dssp CCEEEEEECSSCEEEEEECSCCCHHHHHHHHHHHHTCCGGGEEEEET
T ss_pred CeEEEEEEeCCcEEEEEECCCCCHHHHHHHHHHHHCcChhhEEEEEC
Confidence 4455555543566777899999999999999999853 345777774
No 389
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=23.74 E-value=1.4e+02 Score=24.22 Aligned_cols=60 Identities=17% Similarity=0.296 Sum_probs=45.1
Q ss_pred eEEEEccCCccHHHHHHHHHhhCCCCCceEEEEECCCCCEEEecChHHHHHHHHhhccCCcEEE
Q 014213 272 IRVAQLPLNSSLLQLREVISDRFPSCRAVLIKYRDEEGDLVTITTDEELRWAEASAEMQGSVRL 335 (429)
Q Consensus 272 iR~~~i~~~~~~~~L~~~v~~kf~~~~~~~iky~DedgDliti~~~~dl~~a~~~~~~~~~~rl 335 (429)
|..+..|..-.-.||++.++ ..+.|.|++.|+.-=+|.+.+.+....|+.+....-.++|
T Consensus 18 Vf~l~FP~ewKt~DI~~lFs----~fggv~I~WidDTsAlvvf~~~~~a~~al~~i~k~~~y~i 77 (100)
T 1whv_A 18 VLHVTFPKEWKTSDLYQLFS----AFGNIQISWIDDTSAFVSLSQPEQVQIAVNTSKYAESYRI 77 (100)
T ss_dssp EEEEECCTTCCHHHHHHHHT----TTCSCCCEEEETTEEEEECSCHHHHHHHHHHHHHCCSSEE
T ss_pred EEEEeCChhhhhHHHHHHhh----ccCCEEEEEEcCCeEEEEecCHHHHHHHHHhcccCCceEE
Confidence 44556788888788776544 4469999999988899999999999989886543344444
No 390
>3pge_A SUMO-modified proliferating cell nuclear antigen; DNA replication, DNA binding protein; 2.80A {Saccharomyces cerevisiae}
Probab=23.60 E-value=50 Score=30.10 Aligned_cols=74 Identities=15% Similarity=0.172 Sum_probs=53.1
Q ss_pred CCceeEEEEeCCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEEEecCh-HHHHHHHHhhccCCcEEEE
Q 014213 259 EPKKTVKLVFGEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLVTITTD-EELRWAEASAEMQGSVRLF 336 (429)
Q Consensus 259 ~~~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDliti~~~-~dl~~a~~~~~~~~~~rl~ 336 (429)
...++|||...+....|.|..+..+..|++...++.+. .+.+++.| ||..|.=.++ +||.|- ....|.++
T Consensus 27 ~~~I~LkV~~~g~~v~fkIk~~t~l~kL~~ay~er~Gi~~~~~RF~F---dG~rI~~~~TP~dL~ME-----dgD~Idv~ 98 (200)
T 3pge_A 27 ETHINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLY---DGIRIQADQTPEDLDME-----DNDIIEAH 98 (200)
T ss_dssp CCCEEEEEECSSCEEEEEECTTSCTHHHHHHHHHHHSSCGGGEEEEE---TTEECCTTCCTTTTTCC-----TTEEEEEE
T ss_pred CCeEEEEEecCCCEEEEEEecCCHHHHHHHHHHHHhCCChhhEEEEE---CCEEcCCCCCHHHcCCC-----CCCEEEEE
Confidence 45678888755567788899999999999999999853 35577777 7988886655 666543 23346665
Q ss_pred EEee
Q 014213 337 VVGV 340 (429)
Q Consensus 337 v~e~ 340 (429)
+..+
T Consensus 99 ~~q~ 102 (200)
T 3pge_A 99 REQI 102 (200)
T ss_dssp ECCS
T ss_pred eccC
Confidence 5543
No 391
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=23.35 E-value=1.4e+02 Score=28.41 Aligned_cols=49 Identities=24% Similarity=0.327 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHh-----CCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 014213 62 GGALLKYEKALKL-----LPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLAL 112 (429)
Q Consensus 62 eeAl~~Y~kALel-----~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~AL 112 (429)
+.|...|+.|+.+ .|.++. +-.+..|.+..|+.. .++.++|+..+.+|+
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPi-rLGLaLNfSVFyYEI-ln~p~~Ac~LAk~AF 226 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPI-RLGLALNFSVFYYEI-LNSPDRACRLAKAAF 226 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHH-HHHHHHHHHHHHHHT-SCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcH-HHHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Confidence 4556666666543 233442 222233344444442 266666666655554
No 392
>1wm3_A Ubiquitin-like protein SMT3B; ubiquitin fold, half-open barrel, two helices, protein transport; 1.20A {Homo sapiens} SCOP: d.15.1.1 PDB: 1wm2_A 3uin_B 3uio_B 2ckh_B
Probab=22.84 E-value=1.4e+02 Score=21.79 Aligned_cols=51 Identities=14% Similarity=0.223 Sum_probs=36.5
Q ss_pred eeEEEEe-CCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEEEec
Q 014213 262 KTVKLVF-GEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLVTIT 315 (429)
Q Consensus 262 ~~vK~~~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDliti~ 315 (429)
++|||.- .+..-.+.|..+..+..|++.+.++.+. ...+++.| ||+.|.-.
T Consensus 2 i~lkV~~~~g~~v~~~v~~~t~l~kl~~~y~~~~gi~~~~~rf~f---dG~~l~~~ 54 (72)
T 1wm3_A 2 INLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRF---DGQPINET 54 (72)
T ss_dssp EEEEEECTTSCEEEEEECTTSCTHHHHHHHHHHHTCCTTTCEEEE---TTEECCTT
T ss_pred EEEEEECCCCCEEEEEECCCChHHHHHHHHHHHhCCCcceEEEEE---CCEEcCCC
Confidence 4677763 3344467789999999999999999853 35677777 67766443
No 393
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=22.59 E-value=18 Score=36.52 Aligned_cols=36 Identities=14% Similarity=0.144 Sum_probs=0.0
Q ss_pred HHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 014213 41 FIGMSQELKEEGNKLFQKRDHGGALLKYEKALKLLP 76 (429)
Q Consensus 41 ~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel~P 76 (429)
+++.|..+..+|..+=+.|+|++|+.+|..|+++.-
T Consensus 7 ~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~ 42 (444)
T 2zan_A 7 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFL 42 (444)
T ss_dssp ------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 567888899999999999999999999999998754
No 394
>1ndd_A NEDD8, protein (ubiquitin-like protein NEDD8); proteolysis, signaling protei; 1.60A {Homo sapiens} SCOP: d.15.1.1 PDB: 1r4m_I 1r4n_I* 1xt9_B 2ko3_A 3gzn_I* 2bkr_B 2nvu_I* 3dqv_A 1bt0_A
Probab=22.56 E-value=1.8e+02 Score=20.60 Aligned_cols=42 Identities=7% Similarity=0.072 Sum_probs=31.0
Q ss_pred EEEEe-CCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEE
Q 014213 264 VKLVF-GEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYR 305 (429)
Q Consensus 264 vK~~~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~ 305 (429)
|.|.. .+....+.++.+.++.+|..+|.++++. ....++-|.
T Consensus 3 i~vk~~~g~~~~~~v~~~~tv~~lK~~i~~~~~i~~~~q~L~~~ 46 (76)
T 1ndd_A 3 IKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYS 46 (76)
T ss_dssp EEEECTTSCEEEEECCTTCBHHHHHHHHHHHHCCCGGGEEEEET
T ss_pred EEEECCCCCEEEEEECCCChHHHHHHHHHHHHCcChHHEEEEEC
Confidence 34443 3456677899999999999999999843 345778785
No 395
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=22.30 E-value=2.9e+02 Score=24.56 Aligned_cols=54 Identities=15% Similarity=0.020 Sum_probs=41.9
Q ss_pred cHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHcCCHH
Q 014213 81 DVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVTPLYS-----KALLKRARCYEALNRLD 136 (429)
Q Consensus 81 ~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeldP~~~-----kAl~~rA~ay~~LG~~d 136 (429)
++.++++.+|..++.. ++|.+|...+..|+...|... ..+..+-.+-..+|+..
T Consensus 12 q~v~Y~YYlGr~~~~~--~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFD--SDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4567888899999998 999999999999999988642 24445555666778754
No 396
>3h9d_A ATG8, microtubule-associated protein 1A/1B, light chain putative; autophagy, lipidation, ubiquitin-like, S protein; 2.30A {Trypanosoma brucei} SCOP: d.15.1.0
Probab=22.05 E-value=86 Score=26.13 Aligned_cols=24 Identities=21% Similarity=0.210 Sum_probs=20.9
Q ss_pred ceEEEEccCCccHHHHHHHHHhhC
Q 014213 271 DIRVAQLPLNSSLLQLREVISDRF 294 (429)
Q Consensus 271 DiR~~~i~~~~~~~~L~~~v~~kf 294 (429)
|-..+.||.+.++.+|+..||+++
T Consensus 48 dk~KflVp~~~tv~qf~~~iRkrl 71 (119)
T 3h9d_A 48 DRCKFLVPSDLTVGQFVSVLRKRV 71 (119)
T ss_dssp SSCEEEEETTCBHHHHHHHHHHHH
T ss_pred CcceEEcCCCCCHHHHHHHHHHHh
Confidence 445567999999999999999997
No 397
>1v5o_A 1700011N24RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1
Probab=21.98 E-value=1.6e+02 Score=23.04 Aligned_cols=45 Identities=18% Similarity=0.031 Sum_probs=33.1
Q ss_pred eeEEEEeCC---ceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEEC
Q 014213 262 KTVKLVFGE---DIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRD 306 (429)
Q Consensus 262 ~~vK~~~~~---DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~D 306 (429)
++||..-++ .+..+.|+.+.++.+|..+|..++.. ....+|-|..
T Consensus 10 I~Vk~~~~~~~~~~~~i~v~~~~TV~~LK~~I~~~~gip~~~qrL~~~g 58 (102)
T 1v5o_A 10 ITVYCVRRDLTEVTFSLQVNPDFELSNFRVLCELESGVPAEEAQIVYME 58 (102)
T ss_dssp EEEEECCCCCCCCEEEEEECTTCBHHHHHHHHHHHTCCCGGGBCEEETT
T ss_pred EEEEECCCCcCceEEEEEcCCCCCHHHHHHHHHHHHCcChHHeEEEECC
Confidence 445543344 57778899999999999999999953 3457777754
No 398
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=21.88 E-value=2e+02 Score=29.45 Aligned_cols=31 Identities=10% Similarity=0.010 Sum_probs=19.4
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 014213 117 LYSKALLKRARCYEALNRLDLAFRDVTTVLN 147 (429)
Q Consensus 117 ~~~kAl~~rA~ay~~LG~~deAl~~~~kAL~ 147 (429)
.-.-|+-.+|++|...++|++|...+++++.
T Consensus 196 tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 226 (528)
T 3i4g_A 196 CKQAALAFLGRTCMLQKDWKSGAKAFHDIME 226 (528)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3344566666666666666666666666665
No 399
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=21.70 E-value=2.4e+02 Score=24.65 Aligned_cols=62 Identities=10% Similarity=-0.118 Sum_probs=44.1
Q ss_pred HHHHHH-HHHHcCCHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhC
Q 014213 48 LKEEGN-KLFQKRDHGGALLKYEKALKLLPRNHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEVT 115 (429)
Q Consensus 48 lk~~Gn-~lf~~gdyeeAl~~Y~kALel~P~~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALeld 115 (429)
+.+.+. .+..+|.-++--..+...+.-.+-+++ ++..+|.+|-++ |+..+|-....+|.+--
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~----~l~kia~Ay~Kl--g~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILKNNEVSAS----ILVAIANALRRV--GDERDATTLLIEACKKG 155 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHH----HHHHHHHHHHHT--TCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChH----HHHHHHHHHHHh--cchhhHHHHHHHHHHhh
Confidence 444444 455677777766667665555554554 889999999999 99999999988887543
No 400
>3v6c_B Ubiquitin; structural genomics, structural genomics consortium, SGC, UB protease, hydrolase-signaling protein complex; 1.70A {Homo sapiens} PDB: 3v6e_B
Probab=21.64 E-value=1.5e+02 Score=22.39 Aligned_cols=48 Identities=4% Similarity=0.007 Sum_probs=35.2
Q ss_pred CCceeEEEE-eCCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEEC
Q 014213 259 EPKKTVKLV-FGEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRD 306 (429)
Q Consensus 259 ~~~~~vK~~-~~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~D 306 (429)
...+.|.|. .++.+..+.++.+.++.+|..+|..+++. ....+|-|..
T Consensus 15 ~~~m~i~Vk~~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrL~~~G 64 (91)
T 3v6c_B 15 RGSMQIFVNTLTGTHITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 64 (91)
T ss_dssp CCSEEEEEECTTSCEEEEEECTTCBHHHHHHHHHHHHCCCGGGCEEEETT
T ss_pred CCeEEEEEEeCCCCEEEEEECCCCCHHHHHHHHHhhhCCChhhEEEEECC
Confidence 344556665 35567778899999999999999999853 2447777743
No 401
>1wol_A ST0689, 122AA long conserved hypothetical protein; alpha helix, loop, unknown function; 1.62A {Sulfolobus tokodaii}
Probab=21.50 E-value=1.8e+02 Score=23.40 Aligned_cols=36 Identities=14% Similarity=-0.061 Sum_probs=29.8
Q ss_pred HHHHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 39 EVFIGMSQELKEEGNKLFQKRDHGGALLKYEKALKL 74 (429)
Q Consensus 39 ~~~l~~A~~lk~~Gn~lf~~gdyeeAl~~Y~kALel 74 (429)
...+.+|......+..++..|.|+.|....++|++.
T Consensus 5 ~~wl~~A~~dL~~A~~~~~~g~y~~a~f~aqQa~Ek 40 (122)
T 1wol_A 5 EDWIKQAERDLEEARYAKSGGYYELACFLSQQCAEK 40 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 446788888888999999999999988888777765
No 402
>3phx_B Ubiquitin-like protein ISG15; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Homo sapiens}
Probab=21.47 E-value=1.9e+02 Score=20.94 Aligned_cols=45 Identities=7% Similarity=0.062 Sum_probs=33.3
Q ss_pred eeEEEEe-CCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEEC
Q 014213 262 KTVKLVF-GEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRD 306 (429)
Q Consensus 262 ~~vK~~~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~D 306 (429)
..|.|.. ++.+..+.++.+.++.+|..+|..+++. ....++-|..
T Consensus 5 m~i~Vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~gip~~~qrL~~~G 51 (79)
T 3phx_B 5 LSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEG 51 (79)
T ss_dssp EEEEEECTTSCEEEEEECTTSBHHHHHHHHHHHHTCCGGGEEEEETT
T ss_pred EEEEEEeCCCCEEEEEECCcChHHHHHHHHHhhcCCCHHHEEEEECC
Confidence 4455554 5567778899999999999999999853 3447777743
No 403
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=21.39 E-value=97 Score=31.23 Aligned_cols=20 Identities=15% Similarity=0.069 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHhhccc
Q 014213 153 IMAAEIAERVKKELEKRGLR 172 (429)
Q Consensus 153 ~~a~~~La~l~~~l~e~~~a 172 (429)
..++..+++++.-+++...|
T Consensus 202 ~aa~allarvyL~~~~~~~A 221 (477)
T 3mcx_A 202 WAAQALLSRVYLNMGEYQKA 221 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHH
Confidence 45777777877666544433
No 404
>1wz0_A Ubiquitin-like protein SMT3B; SUMO-2, ubiquitin-like molecule, structural genomics, sentrin2, NPPFSA; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=21.23 E-value=1.7e+02 Score=23.45 Aligned_cols=59 Identities=14% Similarity=0.230 Sum_probs=41.7
Q ss_pred CCceeEEEEe-CCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEECCCCCEEEecCh-HHH
Q 014213 259 EPKKTVKLVF-GEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRDEEGDLVTITTD-EEL 320 (429)
Q Consensus 259 ~~~~~vK~~~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~DedgDliti~~~-~dl 320 (429)
...++|||.- ......+.|..+..+..|++.+.++... ...+++.| ||+.|.=.++ +||
T Consensus 22 ~~~I~IkVk~~~g~~i~~kVk~~t~l~kL~~~y~ek~gi~~~~~rf~F---dG~~l~~~~Tp~dl 83 (104)
T 1wz0_A 22 NDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRF---DGQPINETDTPAQL 83 (104)
T ss_dssp SCCEEEEEECSSSCEEEEEECTTSCHHHHHHHHHHHHTCCTTTSCEES---SSSBCCTTSCTTTT
T ss_pred CCeEEEEEECCCCCEEEEEEcCCChHHHHHHHHHHHhCCCcceEEEEE---CCEEcCCCCCHHHc
Confidence 4568888874 3334567799999999999999999953 35577777 6877654422 444
No 405
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=21.03 E-value=5.9e+02 Score=24.84 Aligned_cols=93 Identities=11% Similarity=0.093 Sum_probs=63.0
Q ss_pred HHHHcCCHHHHHHHHHHHHHhC-------CC------CCccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh------
Q 014213 54 KLFQKRDHGGALLKYEKALKLL-------PR------NHIDVSYLRSNMAACYMQMGLSEYPRAIHECNLALEV------ 114 (429)
Q Consensus 54 ~lf~~gdyeeAl~~Y~kALel~-------P~------~~~~~a~l~~nrA~~y~kl~~g~y~eAi~~~~~ALel------ 114 (429)
..-+..++++|+...++..... .+ +......+....+..|+.. ++...|....+++-..
T Consensus 85 ~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~--~d~~~a~~~l~~~~~~l~~~~~ 162 (393)
T 4b4t_O 85 SLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLK--NDLVKARDLLDDLEKTLDKKDS 162 (393)
T ss_dssp HHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHH--SCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHhhhccCC
Confidence 3446778999999887763322 11 1122344556677788888 9999998888877532
Q ss_pred -CCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 014213 115 -TPL-YSKALLKRARCYEALNRLDLAFRDVTTVLNK 148 (429)
Q Consensus 115 -dP~-~~kAl~~rA~ay~~LG~~deAl~~~~kAL~l 148 (429)
+|. +...|..++..|...++|..+..++-.++..
T Consensus 163 ~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~ 198 (393)
T 4b4t_O 163 IPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLST 198 (393)
T ss_dssp SSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 221 3445566677888999999988888887763
No 406
>1wy8_A NP95-like ring finger protein, isoform A; ubiquitin-like domain, NP95/ICBP90-like ring finger (NIRF), ubiquitin ligase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=21.00 E-value=2e+02 Score=21.43 Aligned_cols=45 Identities=16% Similarity=0.186 Sum_probs=32.4
Q ss_pred ceeEEEEe--CCceEEE-EccCCccHHHHHHHHHhhCCC-CCceEEEEE
Q 014213 261 KKTVKLVF--GEDIRVA-QLPLNSSLLQLREVISDRFPS-CRAVLIKYR 305 (429)
Q Consensus 261 ~~~vK~~~--~~DiR~~-~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~ 305 (429)
.+.|.|.. |..+..+ .++.+.++.+|..+|..+... ....+|-|.
T Consensus 7 ~m~i~Vk~~~g~~~~~l~~v~~~~tV~~lK~~i~~~~gip~~~qrL~~~ 55 (89)
T 1wy8_A 7 GMWIQVRTIDGSKTCTIEDVSRKATIEELRERVWALFDVRPECQRLFYR 55 (89)
T ss_dssp CEEEEEEETTCSCEEEEEEECTTCBHHHHHHHHHHHSCCCTTTEEEEET
T ss_pred cEEEEEEECCCCceEEEEecCCCCCHHHHHHHHHHHHCcChhhEEEEEC
Confidence 34444443 4356677 499999999999999999843 455778784
No 407
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=20.94 E-value=1.2e+02 Score=28.88 Aligned_cols=15 Identities=13% Similarity=0.140 Sum_probs=6.9
Q ss_pred cCCHHHHHHHHHHHH
Q 014213 132 LNRLDLAFRDVTTVL 146 (429)
Q Consensus 132 LG~~deAl~~~~kAL 146 (429)
+++.+.|+...++|+
T Consensus 210 ln~p~~Ac~lAk~AF 224 (268)
T 3efz_A 210 LGNPEGAMKFANRAI 224 (268)
T ss_dssp TCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 444444444444444
No 408
>4hcn_B Polyubiquitin, ubiquitin; ubiquitin/NEDD8 deamidase, NEDD8, protein binding; 2.60A {Saccharomyces cerevisiae}
Probab=20.94 E-value=1.3e+02 Score=23.23 Aligned_cols=46 Identities=4% Similarity=0.023 Sum_probs=33.6
Q ss_pred ceeEEEE-eCCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEEC
Q 014213 261 KKTVKLV-FGEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRD 306 (429)
Q Consensus 261 ~~~vK~~-~~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~D 306 (429)
.+.|.|. ..+.+..+.|+.+.++.+|..+|..+++. ....+|-|..
T Consensus 22 ~m~I~Vk~~~g~~~~l~v~~~~TV~~LK~~I~~~~gip~~~qrLi~~G 69 (98)
T 4hcn_B 22 PMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAG 69 (98)
T ss_dssp CCEEEEEETTCCEEEEECCTTCBHHHHHHHHHHHHCCCGGGCEEEETT
T ss_pred eEEEEEEeCCCCEEEEEECCCCcHHHHHHHHHHHhCCChhHEEEEECC
Confidence 3445554 25567788899999999999999999853 3447777753
No 409
>1v2y_A 3300001G02RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1
Probab=20.91 E-value=1.1e+02 Score=24.86 Aligned_cols=34 Identities=18% Similarity=0.302 Sum_probs=27.8
Q ss_pred eeEEE-EeCCceEEEEccCCccHHHHHHHHHhhCC
Q 014213 262 KTVKL-VFGEDIRVAQLPLNSSLLQLREVISDRFP 295 (429)
Q Consensus 262 ~~vK~-~~~~DiR~~~i~~~~~~~~L~~~v~~kf~ 295 (429)
.+|.| .+.....-+.|+.+.+..+|..+|.++++
T Consensus 8 M~I~Vk~l~g~~~~v~V~~~~TV~dLK~~I~~~~~ 42 (105)
T 1v2y_A 8 MTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQ 42 (105)
T ss_dssp EEEEEECSSSCEEEEEECTTCBHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCEEEEEECCCChHHHHHHHHHHHhC
Confidence 44444 35778888899999999999999999993
No 410
>1yx5_B Ubiquitin; proteasome, UIM, hydrolase; NMR {Homo sapiens} SCOP: d.15.1.1 PDB: 1yx6_B
Probab=20.80 E-value=2.5e+02 Score=21.44 Aligned_cols=37 Identities=5% Similarity=0.036 Sum_probs=29.4
Q ss_pred CCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEE
Q 014213 269 GEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYR 305 (429)
Q Consensus 269 ~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~ 305 (429)
++....+.++.+.++.+|...|..+++. ....+|-|.
T Consensus 9 ~g~~~~~~v~~~~TV~~LK~~I~~~~gi~~~~qrL~~~ 46 (98)
T 1yx5_B 9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 (98)
T ss_dssp TSCEEEEECCTTCBHHHHHHHHHHHTCCCGGGEEEEET
T ss_pred CCCEEEEEECCCCcHHHHHHHHHHHHCcChhhEEEEEC
Confidence 4556678899999999999999999853 345778784
No 411
>3dbh_I NEDD8; cell cycle, activating enzyme, apoptosis, membrane, UBL conjugation pathway, ATP-binding, ligase, nucleotide- binding, polymorphism; 2.85A {Homo sapiens} SCOP: d.15.1.1 PDB: 3dbr_I 3dbl_I
Probab=20.67 E-value=1.6e+02 Score=21.77 Aligned_cols=47 Identities=6% Similarity=0.036 Sum_probs=34.7
Q ss_pred CceeEEEEe-CCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEEC
Q 014213 260 PKKTVKLVF-GEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYRD 306 (429)
Q Consensus 260 ~~~~vK~~~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~D 306 (429)
..++|.|.. .+.+..+.++.+.++.+|..+|..+++. ....+|-|..
T Consensus 11 ~~m~i~vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~gip~~~qrL~~~G 59 (88)
T 3dbh_I 11 GSMLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSG 59 (88)
T ss_dssp CCEEEEEECTTSCEEEEEECTTCBHHHHHHHHHHHHCCCGGGCCEEETT
T ss_pred CcEEEEEEcCCCCEEEEEECCCCCHHHHHHHHHHHHCcCHHHEEEEECC
Confidence 345566653 5677788899999999999999999843 3447777743
No 412
>1uh6_A Ubiquitin-like 5; beta-grAsp fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.15.1.1
Probab=20.48 E-value=2.1e+02 Score=22.86 Aligned_cols=50 Identities=10% Similarity=0.020 Sum_probs=36.1
Q ss_pred cCCCCceeEEEEe-CCceEEEEccCCccHHHHHHHHHhhCCCC-CceEEEEE
Q 014213 256 EDNEPKKTVKLVF-GEDIRVAQLPLNSSLLQLREVISDRFPSC-RAVLIKYR 305 (429)
Q Consensus 256 ~~~~~~~~vK~~~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~~-~~~~iky~ 305 (429)
+....++.|.|.- ......+.+.++.++.+|.++|.++++.. ...+|.|.
T Consensus 23 ~~~~~mm~I~VKtl~Gk~i~lev~p~dTV~~lK~~Ia~k~Gip~~qQrLi~~ 74 (100)
T 1uh6_A 23 EGAATMIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKW 74 (100)
T ss_dssp SSCCCEEEEEEECSSSSCEEEEEETTSBHHHHHHHHHHHHCCCGGGCEEEET
T ss_pred CCCCCeEEEEEECCCCCEEEEEeCCCCcHHHHHHHHHHHhCCCHHHEEEEEC
Confidence 4455667777763 34666678999999999999999999532 34666665
No 413
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=20.48 E-value=1.6e+02 Score=28.65 Aligned_cols=52 Identities=8% Similarity=0.063 Sum_probs=40.0
Q ss_pred CCCceeEEEEeCCce-EEEEccCCccHHHHHHHHHhhCCCC--CceEEEEECCCC
Q 014213 258 NEPKKTVKLVFGEDI-RVAQLPLNSSLLQLREVISDRFPSC--RAVLIKYRDEEG 309 (429)
Q Consensus 258 ~~~~~~vK~~~~~Di-R~~~i~~~~~~~~L~~~v~~kf~~~--~~~~iky~Dedg 309 (429)
....+.++|++-++. ..+.+..+.+-.+|.+.|.+++... ..|-|.|.+.++
T Consensus 82 ~~~~~~~~V~l~dg~~~~~~vd~~tt~~el~~~v~~~l~L~e~~~FgL~~~~~~~ 136 (371)
T 3ivf_A 82 RKKQRPLKIRMLDGTVKTIMVDDSKTVTDMLMTICARIGITNHDEYSLVRELMEE 136 (371)
T ss_dssp EECEEEEEEECTTSCEEEEEEETTSBHHHHHHHHHHHTTCSCGGGEEEECCC---
T ss_pred cCceeEEEEECcCCCEEEEEECCCCCHHHHHHHHHHHcCCCCccccEEEEEeccc
Confidence 346789999986664 4577999999999999999999543 449999987643
No 414
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=20.39 E-value=63 Score=24.40 Aligned_cols=30 Identities=20% Similarity=0.318 Sum_probs=24.1
Q ss_pred ceeEEEEeCCceEEEEccCCccHHHHHHHHH
Q 014213 261 KKTVKLVFGEDIRVAQLPLNSSLLQLREVIS 291 (429)
Q Consensus 261 ~~~vK~~~~~DiR~~~i~~~~~~~~L~~~v~ 291 (429)
+++||+. |...+...+|...++.+|.+.+.
T Consensus 2 ~v~Vkl~-g~~~~~~ev~~g~Tv~dLL~~Lg 31 (74)
T 2l32_A 2 NVTVEVV-GEETSEVAVDDDGTYADLVRAVD 31 (74)
T ss_dssp EEEEECS-SSSEEEEECSTTCSHHHHHHTTC
T ss_pred EEEEEEe-CccceeEEcCCCCcHHHHHHHcC
Confidence 4678887 77777788999999999987653
No 415
>1wf9_A NPL4 family protein; beta-grAsp fold like domain, hypothetical protein, structural genomics, NPPSFA; NMR {Arabidopsis thaliana} SCOP: d.15.1.1
Probab=20.15 E-value=1.6e+02 Score=23.41 Aligned_cols=43 Identities=9% Similarity=0.177 Sum_probs=29.5
Q ss_pred eeEEEEeCCceEEEEcc-CCccHHHHHHHHHhhCCC-CCceEEEE
Q 014213 262 KTVKLVFGEDIRVAQLP-LNSSLLQLREVISDRFPS-CRAVLIKY 304 (429)
Q Consensus 262 ~~vK~~~~~DiR~~~i~-~~~~~~~L~~~v~~kf~~-~~~~~iky 304 (429)
..|+|.-.+-..++.+. .+.++.+|.++|..+++. ....+|.|
T Consensus 8 M~irvrs~~G~~~v~v~~~~~Tv~~LK~kI~~~~gip~~~QrL~~ 52 (107)
T 1wf9_A 8 TMLRVRSRDGLERVSVDGPHITVSQLKTLIQDQLQIPIHNQTLST 52 (107)
T ss_dssp EEEEEECSSCEEEEEECCTTSBHHHHHHHHHHHSCCCTTTCCCBS
T ss_pred EEEEEECCCCCEEEEECCCCCcHHHHHHHHHHHhCcCcccCEEEE
Confidence 34555544445567888 999999999999999963 23344433
No 416
>4eew_A Large proline-rich protein BAG6; ubiquitin-like fold, GP78-binding, chaperone; 1.30A {Homo sapiens}
Probab=20.03 E-value=2.2e+02 Score=21.13 Aligned_cols=46 Identities=11% Similarity=0.104 Sum_probs=34.3
Q ss_pred CceeEEEEe-CCceEEEEccCCccHHHHHHHHHhhCCC-CCceEEEEE
Q 014213 260 PKKTVKLVF-GEDIRVAQLPLNSSLLQLREVISDRFPS-CRAVLIKYR 305 (429)
Q Consensus 260 ~~~~vK~~~-~~DiR~~~i~~~~~~~~L~~~v~~kf~~-~~~~~iky~ 305 (429)
..+.|.|.. ++.+..+.++.+.+..+|..+|..+++. ....+|-|.
T Consensus 16 ~~m~i~Vk~~~g~~~~~~v~~~~tV~~lK~~i~~~~gip~~~qrLi~~ 63 (88)
T 4eew_A 16 DSLEVLVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQ 63 (88)
T ss_dssp CEEEEEEEETTSCEEEEEEETTCBHHHHHHHHHHHHTCCGGGEEEEET
T ss_pred CeEEEEEEcCCCCEEEEEECCCCCHHHHHHHHHHHhCCCHHHEEEEEC
Confidence 345666665 4667778899999999999999999842 344677774
Done!