BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014215
(428 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STM4|C3H43_ARATH Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis
thaliana GN=At3g48440 PE=1 SV=1
Length = 448
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 146/279 (52%), Gaps = 40/279 (14%)
Query: 172 CKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGM--KESKGGSLVEMTGLIGCKYHL 229
C FY RT CK G +C+F+H + + N + KE GG L GLI CKY+
Sbjct: 116 CSFYMRTGSCKFGSSCKFNHPLARK---FQIARDNKVREKEDDGGKL----GLIDCKYYF 168
Query: 230 SAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYG 289
GGCKYG +C+F+H T K ++PELNFLGLP+R E+ECP+YMRNGSC YG
Sbjct: 169 RTGGCKYGETCRFNH------TIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYG 222
Query: 290 VDCRFNHPDPVADEGSD-------------PFNEAS--DPASRSWSPDIISRKTVPNLDN 334
+C+FNHPDP G+D F+ + +S SWS T P +
Sbjct: 223 AECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPRHVNGTSPFIPV 282
Query: 335 HSFHPHWMLKS--KFNSLQGSVYPQAKAELPLSSPALGNLTKTADTSTY-----HQF--N 385
H + ++N Q SVY + S+ L N +A+TS HQ
Sbjct: 283 MLSQTHGVTSQNPEWNGYQASVYSSERGVFSPSTTYLMN-NSSAETSMLLSQYRHQMPAE 341
Query: 386 EFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDGKSP 424
EFPERP +P C Y+MKTG+CK++ CK+HHPKN K P
Sbjct: 342 EFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLP 380
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 132/281 (46%), Gaps = 51/281 (18%)
Query: 57 TKHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENE--RGGFVGQHLGQI 114
+++ YP RP AEDC FY+RTG CKFG CKFNHP+ FQ ++N+ G LG I
Sbjct: 103 SENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLI 162
Query: 115 QCKFYQSTGGCKHGEACRFKHSIEKSEVSKSV-LNAFNLPIKLESKGEGLMEKTVQIQCK 173
CK+Y TGGCK+GE CRF H+I KS ++ + LN LP++ GE ++C
Sbjct: 163 DCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLR---PGE--------VECP 211
Query: 174 FYQRTEGCKHGEACRFSH---STEKSENPLPFSGANGMK--------------------E 210
+Y R CK+G C+F+H +T + F G NG+
Sbjct: 212 YYMRNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPR 271
Query: 211 SKGGSLVEMTGLIGCKYHLSAGGCKYGNSCKFSHSKEK-----PQTYIKKSEKASPELNF 265
G+ + ++ + +++ ++ +S E+ TY+ + A +
Sbjct: 272 HVNGTSPFIPVMLSQTHGVTSQNPEWNGYQASVYSSERGVFSPSTTYLMNNSSAETSMLL 331
Query: 266 LG---------LPIRVHEIECPFYMRNGSCAYGVDCRFNHP 297
P R + EC +YM+ G C + +C+++HP
Sbjct: 332 SQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHP 372
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 93/244 (38%), Gaps = 37/244 (15%)
Query: 62 PSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQS 121
P RP +CP+Y+R G CK+G CKFNHP G G G +G K
Sbjct: 202 PLRPGEVECPYYMRNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPK---- 257
Query: 122 TGGCKHGEACRFKHSIEKSEVSKSVLNAFN-----LPIKLESKGEGLMEKTVQ---IQCK 173
+ + S S S N +P+ L S+ G+ + + Q
Sbjct: 258 -------------ATFQASSTSWSSPRHVNGTSPFIPVML-SQTHGVTSQNPEWNGYQAS 303
Query: 174 FYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSAGG 233
Y G +++ + L + M + E C Y++ G
Sbjct: 304 VYSSERGVFSPSTTYLMNNSSAETSMLLSQYRHQMPAEE---FPERPDQPECSYYMKTGD 360
Query: 234 CKYGNSCKFSHSKEKPQTYIKKSEKASP-ELNFLGLPIRVHEIECPFYMRNGSCAYGVDC 292
CK+ +CK+ H K + K P LN GLP+R + C +Y R G C +G C
Sbjct: 361 CKFKFNCKYHHPK-------NRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPAC 413
Query: 293 RFNH 296
RF+H
Sbjct: 414 RFDH 417
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 55 QGTKHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRG--DFQGLKENERGGFVGQHLG 112
Q E+P RP +C +Y++TG CKF F CK++HP N++G +
Sbjct: 337 QMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKG--LPLRPD 394
Query: 113 QIQCKFYQSTGGCKHGEACRFKHSIE---KSEVSKSVL 147
Q C +Y G CK G ACRF HS++ +E S++++
Sbjct: 395 QNICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIV 432
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 25/32 (78%)
Query: 385 NEFPERPGEPLCDYFMKTGNCKYRSACKFHHP 416
N +P RPG C ++M+TG+CK+ S+CKF+HP
Sbjct: 105 NVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHP 136
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 113 QIQCKFYQSTGGCKHGEACRFKHSIEK-SEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQ 171
Q +C +Y TG CK C++ H + ++ LN LP++ + Q
Sbjct: 349 QPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPD-----------QNI 397
Query: 172 CKFYQRTEGCKHGEACRFSHSTE 194
C +Y R CK G ACRF HS +
Sbjct: 398 CTYYSRYGICKFGPACRFDHSVQ 420
>sp|Q5RJC5|C3H67_ARATH Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis
thaliana GN=At5g63260 PE=2 SV=2
Length = 435
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/268 (42%), Positives = 144/268 (53%), Gaps = 33/268 (12%)
Query: 172 CKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSA 231
C FY RT CK+G +C+F+H + G ++E VE L+ CKY+
Sbjct: 107 CSFYMRTGSCKYGSSCKFNHPVRRKLQ----IGRERVRERDED--VENPKLMECKYYFRT 160
Query: 232 GGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVD 291
GGCKYG SC+FSH KE S + PELNFLGLPIR E ECPFYMRNGSC +G D
Sbjct: 161 GGCKYGESCRFSHMKEH------NSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSD 214
Query: 292 CRFNHPDPVADEGSD-PFNEASDPASRSWSPDIISRKTVPNLDNH-----------SFHP 339
C+FNHPDP A G D P ++ S S + T + H S P
Sbjct: 215 CKFNHPDPTAIGGVDSPLYRGNNGGSFSPKAPSQASSTSWSSTRHMNGTGTAPFIPSMFP 274
Query: 340 HWM----LKSKFNSLQG-SVYPQAKAELPLSSPALGN-LTKTADTSTY-HQFN--EFPER 390
H S +N Q S YP ++ L SS + N L +T+ S Y HQ + EFPER
Sbjct: 275 HSRGVTPQASDWNGYQASSAYPPERSPLAPSSYQVNNSLAETSSFSQYQHQMSVEEFPER 334
Query: 391 PGEPLCDYFMKTGNCKYRSACKFHHPKN 418
P +P C Y++KTG+CK++ CK+HHPKN
Sbjct: 335 PDQPECTYYLKTGDCKFKYKCKYHHPKN 362
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 122/276 (44%), Gaps = 52/276 (18%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKE--NERGGFVGQHLGQIQCKF 118
YP RP +EDC FY+RTG CK+G CKFNHPVR Q +E ER V ++ ++CK+
Sbjct: 98 YPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVRERDEDV-ENPKLMECKY 156
Query: 119 YQSTGGCKHGEACRFKHSIE-KSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFYQR 177
Y TGGCK+GE+CRF H E S S LN LPI+ K +C FY R
Sbjct: 157 YFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEK-----------ECPFYMR 205
Query: 178 TEGCKHGEACRFSHSTEKS----ENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSAGG 233
CK G C+F+H + ++PL + G NG S + H++ G
Sbjct: 206 NGSCKFGSDCKFNHPDPTAIGGVDSPL-YRGNNGGSFSPKAPSQASSTSWSSTRHMNGTG 264
Query: 234 CKYGNSCKFSHSK-EKPQTYIKKSEKAS----PELNFLG--------------------- 267
F HS+ PQ +AS PE + L
Sbjct: 265 TAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAPSSYQVNNSLAETSSFSQYQH 324
Query: 268 ------LPIRVHEIECPFYMRNGSCAYGVDCRFNHP 297
P R + EC +Y++ G C + C+++HP
Sbjct: 325 QMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHP 360
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 69/170 (40%), Gaps = 40/170 (23%)
Query: 254 KKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEASD 313
K+ E+ S + + P+R +C FYMR GSC YG C+FNH
Sbjct: 84 KEEEEGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNH----------------- 126
Query: 314 PASRSWSPDIISRKTVPNLDNHSFHPHWMLKSKFNSLQGSVYPQA-------KAELPLSS 366
P R I R+ V D +P M + G Y ++ + P S
Sbjct: 127 PVRRKLQ---IGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASV 183
Query: 367 PALGNLTKTADTSTYHQFNEFPERPGEPLCDYFMKTGNCKYRSACKFHHP 416
P L F P RPGE C ++M+ G+CK+ S CKF+HP
Sbjct: 184 PEL-------------NFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHP 220
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 55 QGTKHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVR--GDFQGLKENERGGFVGQHLG 112
Q + E+P RP +C +YL+TG CKF + CK++HP N++G +
Sbjct: 325 QMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKG--LPLRPD 382
Query: 113 QIQCKFYQSTGGCKHGEACRFKHSI 137
Q C Y G CK G ACRF HSI
Sbjct: 383 QSMCTHYSRYGICKFGPACRFDHSI 407
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 103/280 (36%), Gaps = 65/280 (23%)
Query: 65 PFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGG------FVGQHL--GQIQC 116
P +C +Y RTG CK+G C+F+H +KE+ F+G + G+ +C
Sbjct: 149 PKLMECKYYFRTGGCKYGESCRFSH--------MKEHNSPASVPELNFLGLPIRPGEKEC 200
Query: 117 KFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEK---------- 166
FY G +C+F + + + + + P+ + G K
Sbjct: 201 PFYMRNG------SCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFSPKAPSQASSTSW 254
Query: 167 ----------TVQIQCKFYQRTEGCK------HGEACRFSHSTEKSE-NPLPFSGANGMK 209
T + + G +G ++ E+S P + N +
Sbjct: 255 SSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAPSSYQVNNSLA 314
Query: 210 ESKGGS----------LVEMTGLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKA 259
E+ S E C Y+L G CK+ CK+ H K + ++A
Sbjct: 315 ETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNR------LPKQA 368
Query: 260 SPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDP 299
+ N GLP+R + C Y R G C +G CRF+H P
Sbjct: 369 AFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDHSIP 408
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 113 QIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQC 172
Q +C +Y TG CK C++ H K+ + K +FN +GL + Q C
Sbjct: 337 QPECTYYLKTGDCKFKYKCKYHHP--KNRLPKQAAFSFN--------DKGLPLRPDQSMC 386
Query: 173 KFYQRTEGCKHGEACRFSHSTEKSENP 199
Y R CK G ACRF HS + +P
Sbjct: 387 THYSRYGICKFGPACRFDHSIPPTFSP 413
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 62 PSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDF 95
P RP C Y R G CKFG C+F+H + F
Sbjct: 378 PLRPDQSMCTHYSRYGICKFGPACRFDHSIPPTF 411
>sp|Q941Q3|C3H37_ARATH Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis
thaliana GN=HUA1 PE=1 SV=1
Length = 524
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 142/330 (43%), Gaps = 74/330 (22%)
Query: 109 QHLGQIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTV 168
Q G+ C Y T CK GE+CRF H I E + + P+ E E+
Sbjct: 173 QRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPE--GGIPDWKEAPV---VPNEEYPERPG 227
Query: 169 QIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYH 228
+ C +Y +T+ CK+G C+F+H E++ + SL E C ++
Sbjct: 228 EPDCPYYIKTQRCKYGSKCKFNHPREEA----------AVSVETQDSLPERPSEPMCTFY 277
Query: 229 LSAGGCKYGNSCKFSHSKE------------------KPQTYIKKSEKASPEL--NFLGL 268
+ G CK+G SCKF H K+ +P +P L N GL
Sbjct: 278 MKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGL 337
Query: 269 PIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEASDPASRSWSPDIISRKT 328
P+R E++CPFY++ GSC YG CR+NHP+ A P + + ++S T
Sbjct: 338 PVRSGEVDCPFYLKTGSCKYGATCRYNHPE----------RTAFIPQAAGVNYSLVSSNT 387
Query: 329 VPNLDNHSFHPHWMLKSKFNSLQGSVYPQAKAELPLSSPALGNLTKTADTSTYHQFNEFP 388
NL+ G V P L+ P LG ++ T +P
Sbjct: 388 A-NLN-----------------LGLVTPATSFYQTLTQPTLGVISAT-----------YP 418
Query: 389 ERPGEPLCDYFMKTGNCKYRSACKFHHPKN 418
+RPG+ CDY+MKTG CK+ CKFHHP +
Sbjct: 419 QRPGQSECDYYMKTGECKFGERCKFHHPAD 448
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 47/284 (16%)
Query: 60 EYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFY 119
EYP RP DCP+Y++T CK+G CKFNHP + E + + + C FY
Sbjct: 221 EYPERPGEPDCPYYIKTQRCKYGSKCKFNHPRE---EAAVSVETQDSLPERPSEPMCTFY 277
Query: 120 QSTGGCKHGEACRFKH--SIEKSEVSKSVLNAFNLPIK--------------LESKGEGL 163
TG CK G +C+F H I+ S+ + ++ L + L +GL
Sbjct: 278 MKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGL 337
Query: 164 MEKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSL------- 216
++ ++ C FY +T CK+G CR++H + P + S +L
Sbjct: 338 PVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGLVTP 397
Query: 217 ---------VEMTGLIG-----------CKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKS 256
G+I C Y++ G CK+G CKF H ++ K++
Sbjct: 398 ATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQA 457
Query: 257 -EKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDP 299
++ + +L+ G P R + CP+YM+ G+C YG C+F+HP P
Sbjct: 458 PQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPP 501
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 124/291 (42%), Gaps = 69/291 (23%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFV-----GQHLGQIQ 115
YP R +DC Y++T CKFG C+F+HP+ G+ + + V + G+
Sbjct: 171 YPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPD 230
Query: 116 CKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFY 175
C +Y T CK+G C+F H E++ VS +E++ + L E+ + C FY
Sbjct: 231 CPYYIKTQRCKYGSKCKFNHPREEAAVS------------VETQ-DSLPERPSEPMCTFY 277
Query: 176 QRTEGCKHGEACRFSH---------------------STEKSENPLPFSGANGMKESKGG 214
+T CK G +C+F H + + NP SKG
Sbjct: 278 MKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKG- 336
Query: 215 SLVEMTGLIGCKYHLSAGGCKYGNSCKFSHSKEK---PQTY-IKKSEKASPELNF-LGL- 268
L +G + C ++L G CKYG +C+++H + PQ + S +S N LGL
Sbjct: 337 -LPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGLV 395
Query: 269 ----------------------PIRVHEIECPFYMRNGSCAYGVDCRFNHP 297
P R + EC +YM+ G C +G C+F+HP
Sbjct: 396 TPATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHP 446
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 97/244 (39%), Gaps = 62/244 (25%)
Query: 57 TKHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQ-------------------- 96
T+ P RP C FY++TG CKFG CKF+HP D Q
Sbjct: 261 TQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHP--KDIQLPSSSQDIGSSVGLTSEPDA 318
Query: 97 ----------GLKENERGGFVGQHLGQIQCKFYQSTGGCKHGEACRFKH----------- 135
L N +G V G++ C FY TG CK+G CR+ H
Sbjct: 319 TNNPHVTFTPALYHNSKGLPVRS--GEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAA 376
Query: 136 SIEKSEVSKSVLNAFNLPI---------KLESKGEGLMEKTV-----QIQCKFYQRTEGC 181
+ S VS + N NL + L G++ T Q +C +Y +T C
Sbjct: 377 GVNYSLVSSNTAN-LNLGLVTPATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGEC 435
Query: 182 KHGEACRFSHSTEK-SENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSAGGCKYGNSC 240
K GE C+F H ++ S +K S G G + C Y++ G CKYG +C
Sbjct: 436 KFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAG-YPRREGALNCPYYMKTGTCKYGATC 494
Query: 241 KFSH 244
KF H
Sbjct: 495 KFDH 498
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 29/169 (17%)
Query: 252 YIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEA 311
Y K K + P R E +C YM+ +C +G CRF+HP V + G + EA
Sbjct: 155 YFTKRPKLESTSHLPIYPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEA 214
Query: 312 SDPASRSWSPDIISRKTVPNLDNHSFHPHWM--LKSKFNSLQGSVYPQAKAELPLSSPAL 369
++ + P P+++ + K+ S +P+ +A + +
Sbjct: 215 ----------PVVPNEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSV----- 259
Query: 370 GNLTKTADTSTYHQFNEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKN 418
+T D+ PERP EP+C ++MKTG CK+ +CKFHHPK+
Sbjct: 260 ----ETQDS--------LPERPSEPMCTFYMKTGKCKFGLSCKFHHPKD 296
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHL-------GQ 113
YP RP +C +Y++TG CKFG CKF+HP K+ + V L G
Sbjct: 417 YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGA 476
Query: 114 IQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNA 149
+ C +Y TG CK+G C+F H ++K+ A
Sbjct: 477 LNCPYYMKTGTCKYGATCKFDHPPPGEVMAKTTSEA 512
>sp|Q5ZDJ6|C3H8_ORYSJ Zinc finger CCCH domain-containing protein 8 OS=Oryza sativa subsp.
japonica GN=Os01g0616400 PE=2 SV=2
Length = 462
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 144/350 (41%), Gaps = 78/350 (22%)
Query: 109 QHLGQIQCKFYQSTGGCKHGEACRFKHS--IEKSEVSKSVLNAFNLPIKLESKGEGLMEK 166
Q G+ C FY T CK G +C+F H + + + A N+ E E+
Sbjct: 104 QRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANV-------EESYPEQ 156
Query: 167 TVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEM-TGLIGC 225
+ C F+ +T CK G C+F+H EK N L N S++ + C
Sbjct: 157 EGEPDCPFFMKTGKCKFGSKCKFNHPKEKV-NALASGNTNDKHLIADSSILPVRPSEPLC 215
Query: 226 KYHLSAGGCKYGNSCKFSHSKE--------KPQTYI-------------------KKSEK 258
++ G CK+ CKF+H K+ +P++ + +
Sbjct: 216 SFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQTPVA 275
Query: 259 ASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEASDPASRS 318
A+ E N GLP+R E++CPFYM+ GSC +G CRFNHPD + P + P S
Sbjct: 276 AAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTILPTPES 335
Query: 319 WSPDIISRKTVPNLDNHSFHPHWMLKSKFNSLQGSVYPQAKAELPLSSPALGNLTKTADT 378
+L S N +QG + A +P+ G +T
Sbjct: 336 ----------------------MLLNSSANFMQGFDF--HAAHMPVGP---GPVT----- 363
Query: 379 STYHQFNEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDGKSPVCTW 428
+P+RPG +CD++MKTG CK+ CKFHHP + P W
Sbjct: 364 --------YPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDPSANW 405
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 127/313 (40%), Gaps = 63/313 (20%)
Query: 48 PDGNGDSQGTKHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHP---VRGDFQGLKENERG 104
P+ + + YP + DCPF+++TG CKFG CKFNHP V G N++
Sbjct: 140 PNWKEQAANVEESYPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASG-NTNDKH 198
Query: 105 GFVGQHLGQIQ-----CKFYQSTGGCKHGEACRFKH---------------------SIE 138
+ ++ C FY TG CK C+F H +
Sbjct: 199 LIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETD 258
Query: 139 KSEVSKSVLNAFNLPIKL--ESKGEGLMEKTVQIQCKFYQRTEGCKHGEACRFSHSTEKS 196
+ SV P+ E +GL + ++ C FY + CK G CRF+H
Sbjct: 259 IGSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLV 318
Query: 197 EN-PLPF--------------SGANGMK--------ESKGGSLV---EMTGLIGCKYHLS 230
N PLP S AN M+ G V + G C +++
Sbjct: 319 LNFPLPLGQTILPTPESMLLNSSANFMQGFDFHAAHMPVGPGPVTYPQRPGATVCDFYMK 378
Query: 231 AGGCKYGNSCKFSH----SKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSC 286
G CK+ + CKF H S P + +E+ S +L GLP R + C FYM+ G C
Sbjct: 379 TGFCKFADRCKFHHPIDRSAPDPSANWEPAEE-SVQLTLAGLPRREDAVVCAFYMKTGVC 437
Query: 287 AYGVDCRFNHPDP 299
+G+ C+F+HP P
Sbjct: 438 KFGMQCKFDHPPP 450
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 148/416 (35%), Gaps = 129/416 (31%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHP---VRGDFQGLKE---NERGGFVGQHLGQI 114
YP RP +DC FY+ T CKFG CKF+HP G KE N + Q G+
Sbjct: 102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEESYPEQE-GEP 160
Query: 115 QCKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIK-LESKGEGLMEKTVQIQCK 173
C F+ TG CK G C+F H EK + L + N K L + L + + C
Sbjct: 161 DCPFFMKTGKCKFGSKCKFNHPKEKV----NALASGNTNDKHLIADSSILPVRPSEPLCS 216
Query: 174 FYQRTEGCKHGEACRFSH--------STEKSENPLPFSGANGMKESKGGSLVEMT----- 220
FY +T CK C+F+H S + E+ + G + + +M
Sbjct: 217 FYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQTPVAA 276
Query: 221 -------------GLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTY---IKKSEKASPELN 264
G + C +++ G CK+G++C+F+H + + ++ +PE
Sbjct: 277 AQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTILPTPESM 336
Query: 265 FLG------------------------LPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPV 300
L P R C FYM+ G C + C+F+H P+
Sbjct: 337 LLNSSANFMQGFDFHAAHMPVGPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHH--PI 394
Query: 301 ADEGSDPFNEASDPASRSWSPDIISRKTVPNLDNHSFHPHWMLKSKFNSLQGSVYPQAKA 360
DP S +W P A+
Sbjct: 395 DRSAPDP--------SANWEP------------------------------------AEE 410
Query: 361 ELPLSSPALGNLTKTADTSTYHQFNEFPERPGEPLCDYFMKTGNCKYRSACKFHHP 416
+ L+ L L + D C ++MKTG CK+ CKF HP
Sbjct: 411 SVQLT---LAGLPRREDAVV---------------CAFYMKTGVCKFGMQCKFDHP 448
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 269 PIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEASDPASRSWSPDIISRKT 328
P R E +C FYM +C +G C+F+HP V + G + E + S+
Sbjct: 103 PQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEESY--------- 153
Query: 329 VPNLDNHSFHPHWML--KSKFNSLQGSVYPQAKAELPLSSPALGNLTKTADTSTYHQFNE 386
P + P +M K KF S +P+ K +++ A GN T D +
Sbjct: 154 -PEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEK----VNALASGN---TNDKHLIADSSI 205
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHPKN 418
P RP EPLC ++ KTG CK+R+ CKF+HPK+
Sbjct: 206 LPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKD 237
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPV-------RGDFQGLKENERGGFVG--QHL 111
YP RP A C FY++TG+CKF CKF+HP+ +++ +E+ + G +
Sbjct: 364 YPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRRE 423
Query: 112 GQIQCKFYQSTGGCKHGEACRFKHSIEKSEVSK 144
+ C FY TG CK G C+F H + ++K
Sbjct: 424 DAVVCAFYMKTGVCKFGMQCKFDHPPPQEAIAK 456
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHPK 417
+P+RPGE C ++M T CK+ +CKF HP+
Sbjct: 102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQ 132
>sp|Q5JLB5|C3H12_ORYSJ Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa
subsp. japonica GN=Os01g0917400 PE=2 SV=2
Length = 439
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 145/321 (45%), Gaps = 62/321 (19%)
Query: 155 KLESKGEGLM------EKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGM 208
++ G G M E++ + C +Y RT C+ G +CRF+H +++ L + A M
Sbjct: 63 QMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRN---LAIASAR-M 118
Query: 209 KESKGGSLVEMTGLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGL 268
K G E G C+Y+L G CK+G +CKF H +EK +LN LG
Sbjct: 119 K----GEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREK------AGIAGRVQLNTLGY 168
Query: 269 PIRVHEIECPFYMRNGSCAYGVDCRFNHPD----PVADEGSDPFNEASDPASR------- 317
P+R E EC +Y++ G C YG C+F+HP+ + GS + A+
Sbjct: 169 PLRPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGT 228
Query: 318 --SWSPDIISRKTVPNLDNHSFH-----PHWMLK-SKFNSLQGSVYPQAKAELPLSSPAL 369
SW+ S P N S + P +++ +NS G + P + +E L SP
Sbjct: 229 MASWAFPRGSFIPSPRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQSPGA 288
Query: 370 GNLTKTAD----------------TSTY-------HQFNEFPERPGEPLCDYFMKTGNCK 406
T+ +S+Y + N FPERP +P C Y+MKTG+CK
Sbjct: 289 QQTYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCK 348
Query: 407 YRSACKFHHPKNGDGKSPVCT 427
+ + CKFHHP+ +P C
Sbjct: 349 FGAVCKFHHPRVRSMPTPDCV 369
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 13/132 (9%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQ 120
YP R DC +YLRTG C+FG C+FNHP + +G + + +GQ +C++Y
Sbjct: 77 YPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKGEYP-ERMGQPECQYYL 135
Query: 121 STGGCKHGEACRFKHSIEKSEVSKSV-LNAFNLPIKLESKGEGLMEKTVQIQCKFYQRTE 179
TG CK G C+F H EK+ ++ V LN P++ K +C +Y +T
Sbjct: 136 KTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEK-----------ECAYYLKTG 184
Query: 180 GCKHGEACRFSH 191
CK+G C+F H
Sbjct: 185 QCKYGNTCKFHH 196
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 99/256 (38%), Gaps = 32/256 (12%)
Query: 58 KHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHL--GQIQ 115
K EYP R +C +YL+TG CKFG CKF+HP + G+ + +G L + +
Sbjct: 119 KGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPR--EKAGIAGRVQLNTLGYPLRPSEKE 176
Query: 116 CKFYQSTGGCKHGEACRFKH--------SIEKSEVSKSVLNAFNL-PIKLESKGEGLMEK 166
C +Y TG CK+G C+F H S S + SV ++ P + +
Sbjct: 177 CAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASWAFPR 236
Query: 167 TVQIQCKFYQRTEG-----CKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTG 221
I +Q G S ++ + +P S + +S G
Sbjct: 237 GSFIPSPRWQNPSNYAPMIVPQGLVQVPSWNSYTGQM-MPVSSSESRLQSPGAQQT---- 291
Query: 222 LIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYM 281
G + A G + S Y + E PE R + EC +YM
Sbjct: 292 -YGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPE--------RPDQPECQYYM 342
Query: 282 RNGSCAYGVDCRFNHP 297
+ G C +G C+F+HP
Sbjct: 343 KTGDCKFGAVCKFHHP 358
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 225 CKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNG 284
C+Y++ G CK+G CKF H + ++ L+ +GLP+R E C FY R G
Sbjct: 338 CQYYMKTGDCKFGAVCKFHHPR------VRSMPTPDCVLSPVGLPLRPGEELCKFYSRYG 391
Query: 285 SCAYGVDCRFNHPDPVADEGSDPFNEAS 312
C +G +C+F+HP G + AS
Sbjct: 392 ICKFGANCKFDHPTMAPPMGVYAYGSAS 419
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQ 120
+P RP +C +Y++TG CKFG CKF+HP + G+ CKFY
Sbjct: 329 FPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYS 388
Query: 121 STGGCKHGEACRFKH 135
G CK G C+F H
Sbjct: 389 RYGICKFGANCKFDH 403
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 12/82 (14%)
Query: 113 QIQCKFYQSTGGCKHGEACRFKHS-IEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQ 171
Q +C++Y TG CK G C+F H + VL+ LP++ GE L
Sbjct: 335 QPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLR---PGEEL-------- 383
Query: 172 CKFYQRTEGCKHGEACRFSHST 193
CKFY R CK G C+F H T
Sbjct: 384 CKFYSRYGICKFGANCKFDHPT 405
Score = 40.8 bits (94), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 21/37 (56%)
Query: 62 PSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGL 98
P RP E C FY R G CKFG CKF+HP G+
Sbjct: 376 PLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPMGV 412
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHP 416
P RPGE LC ++ + G CK+ + CKF HP
Sbjct: 375 LPLRPGEELCKFYSRYGICKFGANCKFDHP 404
>sp|Q2R4J4|C3H63_ORYSJ Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa
subsp. japonica GN=Os11g0472000 PE=2 SV=2
Length = 444
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 134/310 (43%), Gaps = 65/310 (20%)
Query: 165 EKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIG 224
E+ + C +Y RT C+ G C+F+H ++ A MK G + G
Sbjct: 55 ERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMA----VAAARMK----GEYPQRIGQPE 106
Query: 225 CKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNG 284
C+Y+L G CK+G +CKF H +EK + +LN LG P+R +E EC +Y+R G
Sbjct: 107 CQYYLKTGTCKFGATCKFHHPREKAAIATRV------QLNALGYPLRPNEKECAYYLRTG 160
Query: 285 SCAYGVDCRFNHPDP----VADEGS--DPFNEASDPASRSWSPDIISRKTVPNLDNHSFH 338
C +G C+F+HP P VA GS P + P+ ++ P ++ + +
Sbjct: 161 QCKFGSTCKFHHPQPSNTMVAVRGSVYSPGQSVTSPSQHTY-PGAVTNWPLSRSASFIAS 219
Query: 339 PHWMLKSKFNSLQGSVYPQAKAELPLSSPALGNL--------TKTADTSTYHQFNE---- 386
P W S + + + P ++P +P + +TA + Y+ +
Sbjct: 220 PRWPGHSSYAQV---IVPPGLVQVPGWNPYAAQIGSSSSDDQQRTAGGAQYYTGSRHSET 276
Query: 387 -----------------------------FPERPGEPLCDYFMKTGNCKYRSACKFHHPK 417
FPERP +P C ++MKTG+CK+ + CKFHHPK
Sbjct: 277 PNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYMKTGDCKFGAVCKFHHPK 336
Query: 418 NGDGKSPVCT 427
+P C
Sbjct: 337 ERIIPTPNCA 346
Score = 98.6 bits (244), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 68/132 (51%), Gaps = 13/132 (9%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQ 120
YP R DC +Y+RTG C+FG CKFNHP +G + Q +GQ +C++Y
Sbjct: 53 YPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARMKGEYP-QRIGQPECQYYL 111
Query: 121 STGGCKHGEACRFKHSIEKSEVSKSV-LNAFNLPIKLESKGEGLMEKTVQIQCKFYQRTE 179
TG CK G C+F H EK+ ++ V LNA P++ K +C +Y RT
Sbjct: 112 KTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPNEK-----------ECAYYLRTG 160
Query: 180 GCKHGEACRFSH 191
CK G C+F H
Sbjct: 161 QCKFGSTCKFHH 172
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 96/252 (38%), Gaps = 23/252 (9%)
Query: 58 KHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCK 117
K EYP R +C +YL+TG CKFG CKF+HP + + +C
Sbjct: 95 KGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPNEKECA 154
Query: 118 FYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFYQR 177
+Y TG CK G C+F H + S +V + P + + + T +
Sbjct: 155 YYLRTGQCKFGSTCKFHHP-QPSNTMVAVRGSVYSPGQSVTSPS---QHTYPGAVTNWPL 210
Query: 178 TEGCKHGEACRFSHSTEKSENPLP-----FSGANGMKESKGGSLVEMTGLIGCKYHLSAG 232
+ + R+ + ++ +P G N G S + +AG
Sbjct: 211 SRSASFIASPRWPGHSSYAQVIVPPGLVQVPGWNPYAAQIGSSSSD-------DQQRTAG 263
Query: 233 GCKYGNSCKFSHSKEK-PQTYIKKSEKASPELNFLGL------PIRVHEIECPFYMRNGS 285
G +Y + S + Q + S L + P R + EC FYM+ G
Sbjct: 264 GAQYYTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYMKTGD 323
Query: 286 CAYGVDCRFNHP 297
C +G C+F+HP
Sbjct: 324 CKFGAVCKFHHP 335
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 16/112 (14%)
Query: 225 CKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNG 284
C++++ G CK+G CKF H KE+ I + + L+ LGLP+R E C FY R G
Sbjct: 315 CQFYMKTGDCKFGAVCKFHHPKER----IIPTPNCA--LSSLGLPLRPGEPICTFYSRYG 368
Query: 285 SCAYGVDCRFNHPDPVADEGSDPFNEASDPASRSWSPDIISRKTVPNLDNHS 336
C +G +C+F+HP G+ + A+ P D+ +R+ + + HS
Sbjct: 369 ICKFGPNCKFDHP-----MGTVMYGLATSPTG-----DVSARRMLAPVPAHS 410
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 38/154 (24%)
Query: 269 PIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEASDPASRSWSPDIISRKT 328
P R+ E +C +YMR G C +G+ C+FNHP +D + + P I +
Sbjct: 54 PERIGEPDCSYYMRTGLCRFGMTCKFNHP-------ADRKMAVAAARMKGEYPQRIGQPE 106
Query: 329 VPNLDNHSFHPHWMLKS---KFNSLQGSVYPQAKAELPLSSPALGNLTKTADTSTYHQFN 385
+ LK+ KF + +P+ KA + +T Q N
Sbjct: 107 C----------QYYLKTGTCKFGATCKFHHPREKAAI----------------ATRVQLN 140
Query: 386 E--FPERPGEPLCDYFMKTGNCKYRSACKFHHPK 417
+P RP E C Y+++TG CK+ S CKFHHP+
Sbjct: 141 ALGYPLRPNEKECAYYLRTGQCKFGSTCKFHHPQ 174
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQ 120
+P RP +C FY++TG CKFG CKF+HP + G+ C FY
Sbjct: 306 FPERPDQPECQFYMKTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYS 365
Query: 121 STGGCKHGEACRFKHSI 137
G CK G C+F H +
Sbjct: 366 RYGICKFGPNCKFDHPM 382
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 12/96 (12%)
Query: 97 GLKENERGGFVGQHLGQIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKS-VLNAFNLPIK 155
GL +R + Q +C+FY TG CK G C+F H E+ + + L++ LP++
Sbjct: 296 GLYTVQRESIFPERPDQPECQFYMKTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLR 355
Query: 156 LESKGEGLMEKTVQIQCKFYQRTEGCKHGEACRFSH 191
GE + C FY R CK G C+F H
Sbjct: 356 ---PGEPI--------CTFYSRYGICKFGPNCKFDH 380
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHPKN 418
+PER GEP C Y+M+TG C++ CKF+HP +
Sbjct: 53 YPERIGEPDCSYYMRTGLCRFGMTCKFNHPAD 84
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 165 EKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIG 224
E+ Q +C+FY +T CK G C+F H E+ P P + + L G
Sbjct: 308 ERPDQPECQFYMKTGDCKFGAVCKFHHPKERI-IPTPNCALSSL------GLPLRPGEPI 360
Query: 225 CKYHLSAGGCKYGNSCKFSH 244
C ++ G CK+G +CKF H
Sbjct: 361 CTFYSRYGICKFGPNCKFDH 380
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 62 PSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHL 111
P RP C FY R G CKFG CKF+HP+ GL + G + +
Sbjct: 353 PLRPGEPICTFYSRYGICKFGPNCKFDHPMGTVMYGLATSPTGDVSARRM 402
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHP 416
P RPGEP+C ++ + G CK+ CKF HP
Sbjct: 352 LPLRPGEPICTFYSRYGICKFGPNCKFDHP 381
>sp|Q8GXX7|C3H33_ARATH Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis
thaliana GN=ZFN1 PE=1 SV=1
Length = 397
Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 131/304 (43%), Gaps = 74/304 (24%)
Query: 165 EKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIG 224
E+ + C +Y RT C+ G CRF+H ++ L + A M+ G E G
Sbjct: 39 ERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRE---LVIATAR-MR----GEYPERIGQPE 90
Query: 225 CKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNG 284
C+Y+L G CK+G +CKF H + K + S LN LG P+R +E++C +++R G
Sbjct: 91 CEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVS------LNMLGYPLRSNEVDCAYFLRTG 144
Query: 285 SCAYGVDCRFNHPDPVADEGSDPFN-EASDPASRSWSPDIISRKTVPNLDNHSFHPHWML 343
C +G C+FNHP P P + + S P SR+ + P W
Sbjct: 145 HCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSRA---------------SFIASPRWQD 189
Query: 344 KSKFNSLQGSVYPQAKAELPLSSPALGNLTKTADTST----------------------- 380
S + SL + PQ + +P G L + + T
Sbjct: 190 PSSYASL---IMPQGVVPVQGWNPYSGQLGSVSPSGTGNDQNYRNLQQNETIESGSQSQG 246
Query: 381 ---------------YHQF---NEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDGK 422
Y+ N FPERPG+P C ++MKTG+CK+ + CKFHHP++
Sbjct: 247 SFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAP 306
Query: 423 SPVC 426
P C
Sbjct: 307 PPDC 310
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 116/276 (42%), Gaps = 51/276 (18%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQ 120
YP RP DC +Y+RTG C+FG C+FNHP + RG + + +GQ +C++Y
Sbjct: 37 YPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGEYP-ERIGQPECEYYL 95
Query: 121 STGGCKHGEACRFKHSIEKSEVSKSV-LNAFNLPIKLESKGEGLMEKTVQIQCKFYQRTE 179
TG CK G C+F H K+ ++ V LN P+ ++ ++ C ++ RT
Sbjct: 96 KTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPL-----------RSNEVDCAYFLRTG 144
Query: 180 GCKHGEACRFSHSTEKSENPL-PFSGANGMKESKG--------------GSLVEMTGLIG 224
CK G C+F+H + N + P SG S+ SL+ G++
Sbjct: 145 HCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSRASFIASPRWQDPSSYASLIMPQGVVP 204
Query: 225 CK----YHLSAGGCK---YGNSCKFSHSKEKPQTYIKKSE----------KASPELNFLG 267
+ Y G GN + + ++ + P +
Sbjct: 205 VQGWNPYSGQLGSVSPSGTGNDQNYRNLQQNETIESGSQSQGSFSGYNPGSSVPLGGYYA 264
Query: 268 LPI------RVHEIECPFYMRNGSCAYGVDCRFNHP 297
LP R + EC FYM+ G C +G C+F+HP
Sbjct: 265 LPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHP 300
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 100 ENERGGFVGQHLGQIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESK 159
E G + G+ C +Y TG C+ G CRF H ++ V + +
Sbjct: 30 ETMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATA----------RMR 79
Query: 160 GEGLMEKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEM 219
GE E+ Q +C++Y +T CK G C+F H K +G G
Sbjct: 80 GE-YPERIGQPECEYYLKTGTCKFGVTCKFHHPRNK-------AGIAGRVSLNMLGYPLR 131
Query: 220 TGLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYI 253
+ + C Y L G CK+G +CKF+H + +P +
Sbjct: 132 SNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMM 165
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 86/225 (38%), Gaps = 48/225 (21%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHP--------VRGDFQGLKENERGGFVGQ--- 109
YP R DC ++LRTG+CKFG CKFNHP V Q R F+
Sbjct: 128 YPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSRASFIASPRW 187
Query: 110 -----------------------HLGQIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSV 146
+ GQ+ TG ++ + +IE S+
Sbjct: 188 QDPSSYASLIMPQGVVPVQGWNPYSGQLGSVSPSGTGNDQNYRNLQQNETIESGSQSQGS 247
Query: 147 LNAFNLPIKLESKGEGLM-------EKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENP 199
+ +N + G + E+ Q +C+FY +T CK G C+F H ++ P
Sbjct: 248 FSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPP 307
Query: 200 LPFSGANGMKESKGGSLVEMTGLIGCKYHLSAGGCKYGNSCKFSH 244
+ + S G L L C ++ G CK+G SCKF H
Sbjct: 308 -----PDCLLSSIGLPLRPGEPL--CVFYTRYGICKFGPSCKFDH 345
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 19/112 (16%)
Query: 218 EMTGLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPE---LNFLGLPIRVHE 274
E G C++++ G CK+G CKF H +++ +A P L+ +GLP+R E
Sbjct: 273 ERPGQPECQFYMKTGDCKFGTVCKFHHPRDR---------QAPPPDCLLSSIGLPLRPGE 323
Query: 275 IECPFYMRNGSCAYGVDCRFNHP------DPVADEGSDPFNEASDPASRSWS 320
C FY R G C +G C+F+HP D A E +D E S SR S
Sbjct: 324 PLCVFYTRYGICKFGPSCKFDHPMRVFTYDNTASE-TDEVVETSTGKSRRLS 374
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 58 KHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHL--GQIQ 115
+ EYP R +C +YL+TG CKFG CKF+HP + G+ +G L ++
Sbjct: 79 RGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPR--NKAGIAGRVSLNMLGYPLRSNEVD 136
Query: 116 CKFYQSTGGCKHGEACRFKH 135
C ++ TG CK G C+F H
Sbjct: 137 CAYFLRTGHCKFGGTCKFNH 156
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHL--GQIQCKF 118
+P RP +C FY++TG CKFG CKF+HP D Q + +G L G+ C F
Sbjct: 271 FPERPGQPECQFYMKTGDCKFGTVCKFHHPR--DRQAPPPDCLLSSIGLPLRPGEPLCVF 328
Query: 119 YQSTGGCKHGEACRFKHSIE 138
Y G CK G +C+F H +
Sbjct: 329 YTRYGICKFGPSCKFDHPMR 348
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 27/32 (84%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHPKN 418
+PERPGEP C Y+++TG C++ S C+F+HP++
Sbjct: 37 YPERPGEPDCSYYIRTGLCRFGSTCRFNHPRD 68
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHP 416
P RPGEPLC ++ + G CK+ +CKF HP
Sbjct: 317 LPLRPGEPLCVFYTRYGICKFGPSCKFDHP 346
>sp|Q2QT65|C3H66_ORYSJ Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa
subsp. japonica GN=Os12g0405100 PE=2 SV=1
Length = 454
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 130/309 (42%), Gaps = 64/309 (20%)
Query: 165 EKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIG 224
E+ + C +Y RT C+ G C+F+H + L + A G G
Sbjct: 65 ERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRK---LAVAAAR-----MNGEYPYRVGQPE 116
Query: 225 CKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNG 284
C+Y+L G CK+G +CKF H +EK + +LN LG P+R +E EC +Y+R G
Sbjct: 117 CQYYLKTGTCKFGATCKFHHPREKAALANRV------QLNVLGYPMRPNEKECAYYLRTG 170
Query: 285 SCAYGVDCRFNHPDP------VADEGSDPFNEASDPASRSWSPDIISRKTVPNLDNHSFH 338
C + C+F+HP P V + P A+ P ++ P ++ T+ +
Sbjct: 171 QCKFASTCKFHHPQPSNTMVAVRNSMYSPGQSATSPGQHTY-PGAVTNWTLSRSASFIAS 229
Query: 339 PHWMLKSKFNSLQGSVYPQAKAELPLSSPALGNLTKTA---------------------- 376
P W S + + + PQ ++P +P + ++
Sbjct: 230 PRWPGHSGYAQV---IVPQGLVQVPGWNPYAAQMGSSSPDDQQRTPVTTQYYGSRQSETG 286
Query: 377 ---DTSTYHQF---------------NEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKN 418
D Y + N FPERP +P C ++MKTG+CK+ + CKFHHPK
Sbjct: 287 GMGDHGMYQSYQGGSVPVGVYTVQGENIFPERPDQPECQFYMKTGDCKFGAVCKFHHPKE 346
Query: 419 GDGKSPVCT 427
+P C
Sbjct: 347 RLVPAPNCA 355
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQ 120
YP R DC +Y+RTG C+FG CKFNHP + G +GQ +C++Y
Sbjct: 63 YPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKL-AVAAARMNGEYPYRVGQPECQYYL 121
Query: 121 STGGCKHGEACRFKHSIEKSEVSKSV-LNAFNLPIKLESKGEGLMEKTVQIQCKFYQRTE 179
TG CK G C+F H EK+ ++ V LN P++ K +C +Y RT
Sbjct: 122 KTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPNEK-----------ECAYYLRTG 170
Query: 180 GCKHGEACRFSH 191
CK C+F H
Sbjct: 171 QCKFASTCKFHH 182
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 34/152 (22%)
Query: 269 PIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEASDPASRSWSPDIISRKT 328
P R+ E +C +YMR G C +G+ C+FNHP N A+ + + R
Sbjct: 64 PERIGEPDCSYYMRTGLCRFGMTCKFNHPP----------NRKLAVAAARMNGEYPYRVG 113
Query: 329 VPNLDNHSFHPHWMLKS---KFNSLQGSVYPQAKAELPLSSPALGNLTKTADTSTYHQFN 385
P + LK+ KF + +P+ KA AL N +
Sbjct: 114 QPECQ-------YYLKTGTCKFGATCKFHHPREKA-------ALANRVQL-------NVL 152
Query: 386 EFPERPGEPLCDYFMKTGNCKYRSACKFHHPK 417
+P RP E C Y+++TG CK+ S CKFHHP+
Sbjct: 153 GYPMRPNEKECAYYLRTGQCKFASTCKFHHPQ 184
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 6/73 (8%)
Query: 225 CKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNG 284
C++++ G CK+G CKF H KE+ + A LN LGLP+R E C FY R G
Sbjct: 324 CQFYMKTGDCKFGAVCKFHHPKER---LVPAPNCA---LNSLGLPLRPGEPVCTFYSRYG 377
Query: 285 SCAYGVDCRFNHP 297
C +G +C+F+HP
Sbjct: 378 ICKFGPNCKFDHP 390
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQ 120
+P RP +C FY++TG CKFG CKF+HP + G+ C FY
Sbjct: 315 FPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYS 374
Query: 121 STGGCKHGEACRFKHSI 137
G CK G C+F H +
Sbjct: 375 RYGICKFGPNCKFDHPM 391
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 113 QIQCKFYQSTGGCKHGEACRFKHSIEK-SEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQ 171
Q +C+FY TG CK G C+F H E+ LN+ LP++ GE +
Sbjct: 321 QPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLR---PGEPV-------- 369
Query: 172 CKFYQRTEGCKHGEACRFSH 191
C FY R CK G C+F H
Sbjct: 370 CTFYSRYGICKFGPNCKFDH 389
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHPKN 418
+PER GEP C Y+M+TG C++ CKF+HP N
Sbjct: 63 YPERIGEPDCSYYMRTGLCRFGMTCKFNHPPN 94
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHP 90
YP RP ++C +YLRTG CKF CKF+HP
Sbjct: 154 YPMRPNEKECAYYLRTGQCKFASTCKFHHP 183
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 24/49 (48%)
Query: 62 PSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQH 110
P RP C FY R G CKFG CKF+HP+ G + RG H
Sbjct: 362 PLRPGEPVCTFYSRYGICKFGPNCKFDHPMGTLMYGSATSPRGDVSSMH 410
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHP 416
P RPGEP+C ++ + G CK+ CKF HP
Sbjct: 361 LPLRPGEPVCTFYSRYGICKFGPNCKFDHP 390
>sp|Q5NAW2|C3H6_ORYSJ Zinc finger CCCH domain-containing protein 6 OS=Oryza sativa subsp.
japonica GN=Os01g0258700 PE=2 SV=2
Length = 476
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 128/295 (43%), Gaps = 56/295 (18%)
Query: 163 LMEKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGL 222
L E+ + C +Y RT C G+ CR++H ++ G + + E G
Sbjct: 56 LPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEF----GGGARNAAALDYPERAGQ 111
Query: 223 IGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMR 282
C+Y++ G CK+G +CK+ H K+ LN G PIR+ E EC +YM+
Sbjct: 112 PICEYYMKTGTCKFGTNCKYHHPKQD-------GAVLPVMLNNSGFPIRLGEKECSYYMK 164
Query: 283 NGSCAYGVDCRFNHPD----PVADEGSDPFNEASDPASRSWS---------PDIISRKTV 329
G C +G C+F+HP+ P+ P S + ++ P ++ +
Sbjct: 165 TGQCKFGTTCKFHHPEFGGVPMTPGIYPPLQSPSIASPHPYASLANWQMGRPPVVPGSYI 224
Query: 330 PNLDNHSFHPHWMLKSKFNSLQG-SVYPQA--------------------------KAEL 362
P S+ P ML S LQG S YP + + +
Sbjct: 225 PG----SYTP-MMLSSGMIPLQGWSPYPASVNPVVSGGAQQNVQAGPVYGMGHHGSSSTI 279
Query: 363 PLSSPALGNLTKTADTSTYHQFNEFPERPGEPLCDYFMKTGNCKYRSACKFHHPK 417
P + + T +S Q + FPERPG+P C Y+M+TG+CK+ + CK+HHP+
Sbjct: 280 AYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPR 334
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 62 PSRPFAEDCPFYLRTGYCKFGFCCKFNHPV-RG--DFQGLKENERGGFVGQHLGQIQCKF 118
P RP EDC +YLRTG C FG C++NHP RG +F G N + GQ C++
Sbjct: 57 PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEY 116
Query: 119 YQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFYQRT 178
Y TG CK G C++ H + V +LN PI+L K +C +Y +T
Sbjct: 117 YMKTGTCKFGTNCKYHHPKQDGAVLPVMLNNSGFPIRLGEK-----------ECSYYMKT 165
Query: 179 EGCKHGEACRFSH 191
CK G C+F H
Sbjct: 166 GQCKFGTTCKFHH 178
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 13/240 (5%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQ 120
+P R ++C +Y++TG CKFG CKF+HP +F G+ Q Y
Sbjct: 150 FPIRLGEKECSYYMKTGQCKFGTTCKFHHP---EFGGVPMTPGIYPPLQSPSIASPHPYA 206
Query: 121 STGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFYQRTEG 180
S + G S + +L++ +P++ S + V + G
Sbjct: 207 SLANWQMGRPPVVPGSYIPGSYTPMMLSSGMIPLQGWSPYPASVNPVVSGGAQ-QNVQAG 265
Query: 181 CKHGEACRFSHSTEKSENP-LPFSGANGMKES--KGGSLVEMTGLIGCKYHLSAGGCKYG 237
+G S ST P +P++ + G + + E G C+Y++ G CK+G
Sbjct: 266 PVYGMGHHGSSSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFG 325
Query: 238 NSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHP 297
+CK+ H +E + K+ +N L LP+R C +Y +NG C YGV C+++HP
Sbjct: 326 ATCKYHHPREL------SAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHP 379
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 67/166 (40%), Gaps = 17/166 (10%)
Query: 1 MVDDDGWEDNAAGTWAEESCWSQKREQEEELSKEFEKNVALTEESYNP-------DGNGD 53
M+ GW A S +Q+ Q + + T P G
Sbjct: 237 MIPLQGWSPYPASVNPVVSGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQSS 296
Query: 54 SQGTKHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQ---- 109
+ +H +P RP DC +Y+RTG CKFG CK++HP + L + G V
Sbjct: 297 NNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHP-----RELSAPKSGYMVNSLCLP 351
Query: 110 -HLGQIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPI 154
G C +Y G C++G AC++ H + S S L ++PI
Sbjct: 352 LRPGAQPCAYYAQNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPI 397
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 72/156 (46%), Gaps = 33/156 (21%)
Query: 268 LPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEASDPASRSWSPDIISRK 327
LP R E +C +Y+R G+C +G CR+NHP D G F A + + D R
Sbjct: 56 LPERPGEEDCVYYLRTGACGFGDRCRYNHPR---DRGGTEFGGG---ARNAAALDYPERA 109
Query: 328 TVPNLDNHSFHPHWMLKS---KFNSLQGSVYP-QAKAELPLSSPALGNLTKTADTSTYHQ 383
P + + +K+ KF + +P Q A LP+ L N
Sbjct: 110 GQPICE-------YYMKTGTCKFGTNCKYHHPKQDGAVLPV---MLNN------------ 147
Query: 384 FNEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNG 419
+ FP R GE C Y+MKTG CK+ + CKFHHP+ G
Sbjct: 148 -SGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFG 182
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 386 EFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDGKSPV 425
++PER G+P+C+Y+MKTG CK+ + CK+HHPK PV
Sbjct: 104 DYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLPV 143
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 386 EFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDG 421
PERPGE C Y+++TG C + C+++HP++ G
Sbjct: 55 RLPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGG 90
>sp|Q84W91|C3H32_ARATH Zinc finger CCCH domain-containing protein 32 OS=Arabidopsis
thaliana GN=At2g47850 PE=2 SV=2
Length = 468
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 48/288 (16%)
Query: 165 EKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIG 224
E+ C +Y RT C +G CR++H +++ + G E G
Sbjct: 44 ERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRA--------SVEATVRATGQYPERFGEPP 95
Query: 225 CKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNG 284
C+++L G CK+G SCKF H K + LN G P+R + EC +Y++ G
Sbjct: 96 CQFYLKTGTCKFGASCKFHHPKNA------GGSMSHVPLNIYGYPVREGDNECSYYLKTG 149
Query: 285 SCAYGVDCRFNHPDPVADEGSDPFNEASD--PASRSWSPD---------IISRKTVPNLD 333
C +G+ C+F+HP P P A P+ +S PD ++R +P
Sbjct: 150 QCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLLPGSY 209
Query: 334 NHSFHPHWMLKSKFNSLQG----------SVYPQAK-----------AELPLSSPALGNL 372
+ +L + G ++ P A+ +L ++P+L +
Sbjct: 210 MQGAYGPMLLTPGVVPIPGWSPYSAPVSPALSPGAQHAVGATSLYGVTQLTSTTPSLPGV 269
Query: 373 --TKTADTSTYHQFNEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKN 418
+ ++ T + FPERPGEP C Y++KTG+CK+ ++CKFHHP++
Sbjct: 270 YPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRD 317
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 109/288 (37%), Gaps = 63/288 (21%)
Query: 60 EYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERG-GFVGQHLGQIQCKF 118
YP RP A DC +Y+RTG C +G C++NHP D ++ R G + G+ C+F
Sbjct: 41 SYPERPGAPDCAYYMRTGVCGYGNRCRYNHPR--DRASVEATVRATGQYPERFGEPPCQF 98
Query: 119 YQSTGGCKHGEACRFKHSIEK-SEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFYQR 177
Y TG CK G +C+F H +S LN + P++ EG E C +Y +
Sbjct: 99 YLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVR-----EGDNE------CSYYLK 147
Query: 178 TEGCKHGEACRFSHSTEKSEN-PLPFSGA--------NGMKESKGG---SLVEMTGLIGC 225
T CK G C+F H P P + A + M + GG SL L+
Sbjct: 148 TGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLLPG 207
Query: 226 KY------------------------------------HLSAGGCKYGNSCKFSHSKEKP 249
Y H YG + S + P
Sbjct: 208 SYMQGAYGPMLLTPGVVPIPGWSPYSAPVSPALSPGAQHAVGATSLYGVTQLTSTTPSLP 267
Query: 250 QTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHP 297
Y S P R E EC +Y++ G C +G C+F+HP
Sbjct: 268 GVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHP 315
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 102/250 (40%), Gaps = 30/250 (12%)
Query: 59 HEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKF 118
+ YP R +C +YL+TG CKFG CKF+HP G Q +Q
Sbjct: 131 YGYPVREGDNECSYYLKTGQCKFGITCKFHHP---QPAGTTVPPPPASAPQFYPSVQSLM 187
Query: 119 YQSTGGCKHG---EACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFY 175
GG S + +L +PI S + +
Sbjct: 188 PDQYGGPSSSLRVARTLLPGSYMQGAYGPMLLTPGVVPIPGWSPYSAPVSPAL------- 240
Query: 176 QRTEGCKH--GEACRFSHSTEKSENP-LP-----FSGANGMKESKGGSLVEMTGLIGCKY 227
+ G +H G + + S P LP S G+ + K + E G C+Y
Sbjct: 241 --SPGAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSSPTGVIQ-KEQAFPERPGEPECQY 297
Query: 228 HLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCA 287
+L G CK+G SCKF H +++ +A+ L+ +GLP+R C FY++NG C
Sbjct: 298 YLKTGDCKFGTSCKFHHPRDR------VPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCK 351
Query: 288 YGVDCRFNHP 297
+G C+F+HP
Sbjct: 352 FGSTCKFDHP 361
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 58 KHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHL--GQIQ 115
+ +P RP +C +YL+TG CKFG CKF+HP D + N +G L G +
Sbjct: 283 EQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPR--DRVPPRANCVLSPIGLPLRPGVQR 340
Query: 116 CKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPI 154
C FY G CK G C+F H + + S + + P+
Sbjct: 341 CTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPV 379
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 379 STYHQFNEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDG 421
+T ++PER GEP C +++KTG CK+ ++CKFHHPKN G
Sbjct: 79 ATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGG 121
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 385 NEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKN 418
+ +PERPG P C Y+M+TG C Y + C+++HP++
Sbjct: 40 DSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRD 73
>sp|Q9SQU4|C3H34_ARATH Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis
thaliana GN=At3g06410 PE=2 SV=2
Length = 462
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 132/298 (44%), Gaps = 51/298 (17%)
Query: 161 EGLMEKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMT 220
E E+ + C +Y RT C +G CRF+H ++ G + G+L E
Sbjct: 49 ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRG-------AVIGGVRGEAGALPERM 101
Query: 221 GLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFY 280
G C++ + G CK+G SCK+ H P+ A L++LG P+R E EC +Y
Sbjct: 102 GHPVCQHFMRTGTCKFGASCKYHH----PRQGGGGGSVAPVSLSYLGYPLRPGEKECSYY 157
Query: 281 MRNGSCAYGVDCRFNHPDPVADEGSDPFNEASDPASRSWSPDIISR-------------- 326
+R G C +G+ CRFNHP P+A +G + P + I
Sbjct: 158 LRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQSQSIPSSQQYGL 217
Query: 327 -KTVPNLDNHSF-----------HPHWMLKSKFNSLQGSV--YPQAKAELPLSSPALGNL 372
T P+ S+ P + S +N Q S+ P + + S ++ L
Sbjct: 218 VLTRPSFLTGSYLQSPYGPPMVLPPGMVPYSGWNPYQASLSAMPSPGTQPSIGSSSIYGL 277
Query: 373 T-----KTADTSTYHQF-------NEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKN 418
T TA T TY EFP+RP +P C YFM+TG+CK+ S+C++HHP +
Sbjct: 278 TPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVD 335
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPV-RGDFQGLKENERGGFVGQHLGQIQCKFY 119
YP RP DC +YLRTG C +G C+FNHP RG G E G + +G C+ +
Sbjct: 51 YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALP-ERMGHPVCQHF 109
Query: 120 QSTGGCKHGEACRFKHSIE---KSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFYQ 176
TG CK G +C++ H + V+ L+ P++ K +C +Y
Sbjct: 110 MRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEK-----------ECSYYL 158
Query: 177 RTEGCKHGEACRFSH 191
RT CK G CRF+H
Sbjct: 159 RTGQCKFGLTCRFNH 173
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 58/137 (42%), Gaps = 4/137 (2%)
Query: 1 MVDDDGWEDNAAGTWAEESCWSQKREQEEELSKEFEKNVALTEESYNPDGNGDSQGTKHE 60
MV GW A A S +Q + + + T + S T E
Sbjct: 244 MVPYSGWNPYQASLSAMPSPGTQPSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKE 303
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHL--GQIQCKF 118
+P RP +C +++RTG CKFG C+++HPV D K +G L G QC
Sbjct: 304 FPQRPDQPECQYFMRTGDCKFGSSCRYHHPV--DAVPPKTGIVLSSIGLPLRPGVAQCTH 361
Query: 119 YQSTGGCKHGEACRFKH 135
+ G CK G AC+F H
Sbjct: 362 FAQHGICKFGPACKFDH 378
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 52 GDSQGTKHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHL 111
G +G P R C ++RTG CKFG CK++HP +G G ++G L
Sbjct: 88 GGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPL 147
Query: 112 --GQIQCKFYQSTGGCKHGEACRFKHSI 137
G+ +C +Y TG CK G CRF H +
Sbjct: 148 RPGEKECSYYLRTGQCKFGLTCRFNHPV 175
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDG 421
PER G P+C +FM+TG CK+ ++CK+HHP+ G G
Sbjct: 97 LPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGG 131
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 10/74 (13%)
Query: 225 CKYHLSAGGCKYGNSCKFSHSKEK--PQTYIKKSEKASPELNFLGLPIRVHEIECPFYMR 282
C+Y + G CK+G+SC++ H + P+T I L+ +GLP+R +C + +
Sbjct: 313 CQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIV--------LSSIGLPLRPGVAQCTHFAQ 364
Query: 283 NGSCAYGVDCRFNH 296
+G C +G C+F+H
Sbjct: 365 HGICKFGPACKFDH 378
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 165 EKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIG 224
++ Q +C+++ RT CK G +CR+ H + G+ S G L G+
Sbjct: 306 QRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPP------KTGIVLSSIG-LPLRPGVAQ 358
Query: 225 CKYHLSAGGCKYGNSCKFSH 244
C + G CK+G +CKF H
Sbjct: 359 CTHFAQHGICKFGPACKFDH 378
>sp|Q8L7N8|C3H57_ARATH Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis
thaliana GN=ZFN3 PE=2 SV=2
Length = 375
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 123/306 (40%), Gaps = 76/306 (24%)
Query: 50 GNGDSQGTKHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQ 109
G+ D+ G YP R DC +Y+RTG C+FG C+FNHP +G + +
Sbjct: 28 GSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKGEY-PE 86
Query: 110 HLGQIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSV-LNAFNLPIKLESKGEGLMEKTV 168
+GQ +C+FY TG CK G C+F H K+ + SV +N + P++
Sbjct: 87 RIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPN----------- 135
Query: 169 QIQCKFYQRTEGCKHGEACRFSHSTEKSE------------------------------- 197
+ C ++ R CK G C+F+H +S
Sbjct: 136 EDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTSF 195
Query: 198 --NPLPFSGANGMKESKGGSLV------------------------EMTGLIGCKYHLSA 231
NP +G G L E G C++++
Sbjct: 196 VANPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPERPGQPECQFYMKT 255
Query: 232 GGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVD 291
G CK+G CKF H +++ ++ L+ +GLP+R E C FY R G C +G
Sbjct: 256 GDCKFGTVCKFHHPRDR------QTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPS 309
Query: 292 CRFNHP 297
C+F+HP
Sbjct: 310 CKFDHP 315
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 110/264 (41%), Gaps = 68/264 (25%)
Query: 214 GSLVEMTGLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVH 273
GS E G C Y++ G C++G++C+F+H ++ K P R+
Sbjct: 37 GSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKGE-------YPERIG 89
Query: 274 EIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEASDPASRSWSPDIISRKTVPNLD 333
+ EC FY++ G+C +GV C+F+HP N+A S S +++S PN D
Sbjct: 90 QPECEFYLKTGTCKFGVTCKFHHPR----------NKAG--IDGSVSVNVLSYPLRPNED 137
Query: 334 NHSF----------------HPHWMLKSKFNSLQGS-------------VYPQAKAELPL 364
+ S+ HP + S++GS Y ++
Sbjct: 138 DCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTSFVA 197
Query: 365 SSPALGNLTKTADTSTYHQF--------------------NEFPERPGEPLCDYFMKTGN 404
+ P L + + A S F N FPERPG+P C ++MKTG+
Sbjct: 198 NPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPERPGQPECQFYMKTGD 257
Query: 405 CKYRSACKFHHPKNGDGKSPVCTW 428
CK+ + CKFHHP++ P C
Sbjct: 258 CKFGTVCKFHHPRDRQTPPPDCVL 281
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 123/294 (41%), Gaps = 61/294 (20%)
Query: 165 EKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIG 224
E+ + C +Y RT C+ G CRF+H ++ L + A G E G
Sbjct: 41 ERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRK---LVIATAR-----IKGEYPERIGQPE 92
Query: 225 CKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNG 284
C+++L G CK+G +CKF H + K S +N L P+R +E +C +++R G
Sbjct: 93 CEFYLKTGTCKFGVTCKFHHPRNK------AGIDGSVSVNVLSYPLRPNEDDCSYFLRIG 146
Query: 285 SCAYGVDCRFNHPDP------VADEGSDPFN---EASDPASRSWS-------------PD 322
C +G C+FNHP V+ GS ++ + S SWS P
Sbjct: 147 QCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTSFVANPPRLQDPS 206
Query: 323 IISRKTVPNLDNHSFHPHWMLKSKFNSL-QGSVYPQAKAELPLSSPALGNLTKTAD---- 377
+ + L + FH + F +L + +V+P+ + P KT D
Sbjct: 207 GFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPERPGQ-----PECQFYMKTGDCKFG 261
Query: 378 -TSTYHQFNE--------------FPERPGEPLCDYFMKTGNCKYRSACKFHHP 416
+H + P RPGEPLC ++ + G CK+ +CKF HP
Sbjct: 262 TVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 315
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHL----GQIQC 116
YP RP +DC ++LR G CKFG CKFNHP + L + RG V L GQ
Sbjct: 130 YPLRPNEDDCSYFLRIGQCKFGGTCKFNHP-QTQSTNLMVSVRGSPVYSALQSLTGQPSY 188
Query: 117 KFYQSTGGC---KHGEACRFKHSIEKSEVSKSVLNAFNLPIKLES--KGEGLMEKTVQIQ 171
+ +++ + + F + S + ++P+ + + E+ Q +
Sbjct: 189 SWSRTSFVANPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPERPGQPE 248
Query: 172 CKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSA 231
C+FY +T CK G C+F H ++ P + + S G L L C ++
Sbjct: 249 CQFYMKTGDCKFGTVCKFHHPRDRQTPP-----PDCVLSSVGLPLRPGEPL--CVFYSRY 301
Query: 232 GGCKYGNSCKFSHSKEKPQTYIKKSEKASP 261
G CK+G SCKF H + + + ASP
Sbjct: 302 GICKFGPSCKFDHPM---RVFTYNNNTASP 328
>sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum
sativum PE=2 SV=1
Length = 417
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 129/301 (42%), Gaps = 66/301 (21%)
Query: 172 CKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSA 231
C +Y RT C+ G CRF+H + L + A MK G E G C+Y+L
Sbjct: 36 CSYYIRTGLCRFGATCRFNHPPNRK---LAIATAR-MK----GEFPERLGQPECQYYLKT 87
Query: 232 GGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVD 291
G CK+G +C+F H K+K + + LN LG P+R +E E +Y+R G C +G
Sbjct: 88 GTCKFGATCRFHHPKDKAGVAGRVA------LNILGYPLRPNESERAYYLRTGQCKFGNT 141
Query: 292 CRFNHPDP----VADEGSDPF---NEASDPASRSWSPDIISRKTVPNLDNHSFHPHWMLK 344
C+F+HP P ++ GS + + P +S++ I + + ++ P W
Sbjct: 142 CKFHHPQPSNMVLSMRGSTVYPTVQSPTTPGQQSYAAGITNWSS----SSYVPSPRWQGP 197
Query: 345 SKFNSLQGSVYPQAKAELP-----------------------LSSPALGNLTKTADTSTY 381
S + L + PQ +P + G L Y
Sbjct: 198 SSYAPL---ILPQGVVSVPGWSTYGGQMGSESPQQTMRNDQTYGTSHQGELENAGLQGAY 254
Query: 382 HQF---------------NEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDGKSPVC 426
Q+ N FPERP +P C ++MKTG+CK+ + C+FHHP+ +P C
Sbjct: 255 SQYRSGSVPVGFYALQRDNIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPAPDC 314
Query: 427 T 427
Sbjct: 315 V 315
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 111/290 (38%), Gaps = 65/290 (22%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQ 120
YP P DC +Y+RTG C+FG C+FNHP +G F + LGQ +C++Y
Sbjct: 27 YPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKGEFP-ERLGQPECQYYL 85
Query: 121 STGGCKHGEACRFKHSIEKSEVSKSV-LNAFNLPIKLESKGEGLMEKTVQIQCKFYQRTE 179
TG CK G CRF H +K+ V+ V LN P++ + + +Y RT
Sbjct: 86 KTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPN-----------ESERAYYLRTG 134
Query: 180 GCKHGEACRFSH-----------------STEKSENPLPFSGANGMKE------------ 210
CK G C+F H + + P S A G+
Sbjct: 135 QCKFGNTCKFHHPQPSNMVLSMRGSTVYPTVQSPTTPGQQSYAAGITNWSSSSYVPSPRW 194
Query: 211 ---SKGGSLVEMTGLIGCKYHLSAGG--------------CKYGNSCKFSHSKEKPQTYI 253
S L+ G++ + GG YG S + Q
Sbjct: 195 QGPSSYAPLILPQGVVSVPGWSTYGGQMGSESPQQTMRNDQTYGTSHQGELENAGLQGAY 254
Query: 254 KKSEKASPELNFLGL------PIRVHEIECPFYMRNGSCAYGVDCRFNHP 297
+ S + F L P R + EC FYM+ G C +G CRF+HP
Sbjct: 255 SQYRSGSVPVGFYALQRDNIFPERPDQPECQFYMKTGDCKFGAVCRFHHP 304
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 10/75 (13%)
Query: 225 CKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPE--LNFLGLPIRVHEIECPFYMR 282
C++++ G CK+G C+F H +E+ + +P+ L+ +GLP+R E C FY R
Sbjct: 284 CQFYMKTGDCKFGAVCRFHHPRER--------QIPAPDCVLSPIGLPLRPGEPLCVFYSR 335
Query: 283 NGSCAYGVDCRFNHP 297
G C +G C+F+HP
Sbjct: 336 YGICKFGPSCKFDHP 350
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Query: 1 MVDDDGWEDNAAGTWAEESCWSQKREQEEELSKEFEKNVALTEESYNPDGNGD------S 54
+V GW +E + + +Q S + E A + +Y+ +G +
Sbjct: 209 VVSVPGWSTYGGQMGSESPQQTMRNDQTYGTSHQGELENAGLQGAYSQYRSGSVPVGFYA 268
Query: 55 QGTKHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQI 114
+ +P RP +C FY++TG CKFG C+F+HP + G+
Sbjct: 269 LQRDNIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPAPDCVLSPIGLPLRPGEP 328
Query: 115 QCKFYQSTGGCKHGEACRFKHSI 137
C FY G CK G +C+F H +
Sbjct: 329 LCVFYSRYGICKFGPSCKFDHPM 351
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 97 GLKENERGGFVGQHLGQIQCKFYQSTGGCKHGEACRFKHSIEKS-EVSKSVLNAFNLPIK 155
G +R + Q +C+FY TG CK G CRF H E+ VL+ LP++
Sbjct: 265 GFYALQRDNIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRERQIPAPDCVLSPIGLPLR 324
Query: 156 LESKGEGLMEKTVQIQCKFYQRTEGCKHGEACRFSH 191
GE L C FY R CK G +C+F H
Sbjct: 325 ---PGEPL--------CVFYSRYGICKFGPSCKFDH 349
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHPKN 418
+PE PGEP C Y+++TG C++ + C+F+HP N
Sbjct: 27 YPEHPGEPDCSYYIRTGLCRFGATCRFNHPPN 58
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 165 EKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLP--FSGANGMKESKGGSLVEMTGL 222
E+ Q +C+FY +T CK G CRF H E+ + P P G+ G L
Sbjct: 277 ERPDQPECQFYMKTGDCKFGAVCRFHHPRER-QIPAPDCVLSPIGLPLRPGEPL------ 329
Query: 223 IGCKYHLSAGGCKYGNSCKFSH 244
C ++ G CK+G SCKF H
Sbjct: 330 --CVFYSRYGICKFGPSCKFDH 349
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHP 416
P RPGEPLC ++ + G CK+ +CKF HP
Sbjct: 321 LPLRPGEPLCVFYSRYGICKFGPSCKFDHP 350
>sp|Q6NPN3|C3H58_ARATH Zinc finger CCCH domain-containing protein 58 OS=Arabidopsis
thaliana GN=At5g18550 PE=2 SV=1
Length = 465
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 161 EGLMEKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMT 220
E E+ + C +Y RT C +G CRF+H ++ G ++ G E
Sbjct: 46 ETFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAP-------VLGGLRTEAGEFPERM 98
Query: 221 GLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASP-ELNFLGLPIRVHEIECPF 279
G C++ + G CK+G SCK+ H ++ + +P LN++G P+R E EC +
Sbjct: 99 GQPVCQHFMRTGTCKFGASCKYHHPRQG-----GGGDSVTPVSLNYMGFPLRPGEKECSY 153
Query: 280 YMRNGSCAYGVDCRFNHPDPVADEGSDPFNEASDPASRSWSPDIISRKTVPNLDNHS--- 336
+MR G C +G CR++HP P + + A + P + S +TVP+ +
Sbjct: 154 FMRTGQCKFGSTCRYHHPVPPGVQAPSQQQQQQLSAGPTMYPSLQS-QTVPSSQQYGVVL 212
Query: 337 ---------------------FHPHWMLKSKFNSLQGSV----YPQAKAEL--------- 362
P + S +N Q SV P + +
Sbjct: 213 ARPQLLPGSYVQSPYGYGQMVLPPGMVPYSGWNPYQASVSAMPSPGTQPSMGTSSVYGIT 272
Query: 363 PLSSPALGNLTKTADTSTYHQFNEFPERPGEPLCDYFMKTGNCKYRSACKFHHP 416
PLS A + + T ++ FP+RP +P C YFM+TG+CK+ ++C+FHHP
Sbjct: 273 PLSPSAPAYQSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHP 326
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 16/135 (11%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPV-RGDFQGLKENERGGFVGQHLGQIQCKFY 119
+P RP DC +YLRTG C +G C+FNHP R G E G F + +GQ C+ +
Sbjct: 48 FPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFP-ERMGQPVCQHF 106
Query: 120 QSTGGCKHGEACRFKHSIEKS---EVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFYQ 176
TG CK G +C++ H + V+ LN P++ K +C ++
Sbjct: 107 MRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEK-----------ECSYFM 155
Query: 177 RTEGCKHGEACRFSH 191
RT CK G CR+ H
Sbjct: 156 RTGQCKFGSTCRYHH 170
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 98/250 (39%), Gaps = 28/250 (11%)
Query: 60 EYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHL--GQIQCK 117
E+P R C ++RTG CKFG CK++HP +G ++G L G+ +C
Sbjct: 93 EFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECS 152
Query: 118 FYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFYQR 177
++ TG CK G CR+ H + + S L S G M ++Q Q +
Sbjct: 153 YFMRTGQCKFGSTCRYHHPVPPGVQAPSQQQQQQL-----SAGP-TMYPSLQSQTVPSSQ 206
Query: 178 TEGCKHGEACRFSHSTEKS----------ENPLPFSGANGMKESKGGSLVEMTGLIGCKY 227
G S +S +P+SG N + S ++ +
Sbjct: 207 QYGVVLARPQLLPGSYVQSPYGYGQMVLPPGMVPYSGWNPYQAS-------VSAMPSPGT 259
Query: 228 HLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCA 287
S G S S Q+ + ++ E F P R + EC ++MR G C
Sbjct: 260 QPSMGTSSVYGITPLSPSAPAYQSGPSSTGVSNKEQTF---PQRPEQPECQYFMRTGDCK 316
Query: 288 YGVDCRFNHP 297
+G CRF+HP
Sbjct: 317 FGTSCRFHHP 326
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 8/56 (14%)
Query: 366 SPALGNLTKTADTSTYHQFNEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDG 421
+P LG L A EFPER G+P+C +FM+TG CK+ ++CK+HHP+ G G
Sbjct: 81 APVLGGLRTEA--------GEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGG 128
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 6/137 (4%)
Query: 1 MVDDDGWEDNAAGTWAEESCWSQKREQEEELSKEFEKNVALTEESYNPDGNGDSQGTKHE 60
MV GW A A S +Q + + + P G S +
Sbjct: 238 MVPYSGWNPYQASVSAMPSPGTQPSMGTSSVYGITPLSPSAPAYQSGPSSTGVSN-KEQT 296
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHL--GQIQCKF 118
+P RP +C +++RTG CKFG C+F+HP+ E +G L G + C
Sbjct: 297 FPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEA---ASPEASTLSHIGLPLRPGAVPCTH 353
Query: 119 YQSTGGCKHGEACRFKH 135
+ G CK G AC+F H
Sbjct: 354 FAQHGICKFGPACKFDH 370
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
Query: 225 CKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPE---LNFLGLPIRVHEIECPFYM 281
C+Y + G CK+G SC+F H E ASPE L+ +GLP+R + C +
Sbjct: 306 CQYFMRTGDCKFGTSCRFHHPMEA----------ASPEASTLSHIGLPLRPGAVPCTHFA 355
Query: 282 RNGSCAYGVDCRFNH 296
++G C +G C+F+H
Sbjct: 356 QHGICKFGPACKFDH 370
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 113 QIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQC 172
Q +C+++ TG CK G +CRF H +E + S L+ LP++ + + C
Sbjct: 303 QPECQYFMRTGDCKFGTSCRFHHPMEAASPEASTLSHIGLPLRPGA-----------VPC 351
Query: 173 KFYQRTEGCKHGEACRFSH 191
+ + CK G AC+F H
Sbjct: 352 THFAQHGICKFGPACKFDH 370
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDGKSPV 425
FPERP EP C Y+++TG C Y S C+F+HP+N ++PV
Sbjct: 48 FPERPDEPDCIYYLRTGVCGYGSRCRFNHPRN---RAPV 83
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 156 LESKGEGLMEKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGS 215
+ +K + ++ Q +C+++ RT CK G +CRF H P+ + S G
Sbjct: 290 VSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHH-------PMEAASPEASTLSHIG- 341
Query: 216 LVEMTGLIGCKYHLSAGGCKYGNSCKFSH 244
L G + C + G CK+G +CKF H
Sbjct: 342 LPLRPGAVPCTHFAQHGICKFGPACKFDH 370
>sp|Q2QTY2|C3H65_ORYSJ Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa
subsp. japonica GN=Os12g0278800 PE=2 SV=1
Length = 529
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 119/240 (49%), Gaps = 35/240 (14%)
Query: 209 KESKGGSLVEMTGLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGL 268
KE + + E + CKY+ + GGCK+G +CK+ H K K++ +LNFLGL
Sbjct: 227 KEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGK----EGKTDAEKVDLNFLGL 282
Query: 269 PIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNE--------------ASDP 314
P+R E ECP+YMR GSC Y +C+F+HPDP DP E +S P
Sbjct: 283 PLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQP 342
Query: 315 ASRSWSPD--IISRKTVPNLDNHSFHPHWMLKSK-------FNSL-QGSVYPQAKAELPL 364
+ W PD ++ VP + + ML + +N Q + P +P
Sbjct: 343 NASIW-PDQRTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPF 401
Query: 365 ----SSPALGNLTKTADTSTYHQF--NEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKN 418
++P + K + + Q E+PERPG+P C +F+K+G CK+R CK+HHP++
Sbjct: 402 QHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRS 461
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 91/222 (40%), Gaps = 46/222 (20%)
Query: 57 TKHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVR------------------------ 92
++ +P RP DC +Y++ G C+FG CKFNHP R
Sbjct: 101 SRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKKKSRVKGSNGGSGSGGSNSSSNK 160
Query: 93 ----GDFQGLKENERGGFVGQHLGQIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLN 148
D Q + E G +V ++ + G + E + K+S E +V K +
Sbjct: 161 ASSPDDEQQAPKEEYGSYVPDISPEVDSLGFADKGSASNLENFK-KYSYEIIDVKKGRVE 219
Query: 149 AFNLPIKLESKGEGLMEKTVQIQCKFYQRTEGCKHGEACRFSH------STEKSENPLPF 202
L + E + E + E + Q +CK+Y GCK G+AC++ H T+ + L F
Sbjct: 220 PKELKVAKEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNF 279
Query: 203 SGANGMKESKGGSLVEMTGLIGCKYHLSAGGCKYGNSCKFSH 244
G L G C Y++ G CKY +CKF H
Sbjct: 280 LG-----------LPLRPGEKECPYYMRTGSCKYATNCKFHH 310
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 96/239 (40%), Gaps = 21/239 (8%)
Query: 62 PSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLK---ENERGGFVGQHLGQIQCKF 118
P RP ++CP+Y+RTG CK+ CKF+HP + E+E G Q +Q
Sbjct: 283 PLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQ---DVQGSS 339
Query: 119 YQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFYQRT 178
Q + +H + S S P + E V + +Y
Sbjct: 340 SQPNASIWPDQRTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLN-PYYPPG 398
Query: 179 EGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSAGGCKYGN 238
+H A +H K+ G ++ E G C++ + +G CK+
Sbjct: 399 VPFQHFPAAPINHPMYKAPE------IPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRM 452
Query: 239 SCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHP 297
CK+ H P++ + + SP LGLPI+ + C +Y R G C +G C +NHP
Sbjct: 453 KCKYHH----PRSPVPPAGALSP----LGLPIKPDQPVCTYYGRYGVCKFGPACAYNHP 503
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 97/250 (38%), Gaps = 34/250 (13%)
Query: 68 EDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERG--GFVGQHL--GQIQCKFYQSTG 123
E+C +Y G CKFG CK+ H R +G + E+ F+G L G+ +C +Y TG
Sbjct: 241 EECKYYSTPGGCKFGKACKYLH--RDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTG 298
Query: 124 GCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFYQRTEGCKH 183
CK+ C+F H + SK +LE + ++ VQ
Sbjct: 299 SCKYATNCKFHHPDPSNVASKDP--------QLEHENGDAPQQDVQ---------GSSSQ 341
Query: 184 GEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCK----YHLSAGGCKYGNS 239
A + +E+ +PF + S ++ G+ YH Y
Sbjct: 342 PNASIWPDQRTVNEHHVPFIAPS---PSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPG 398
Query: 240 CKFSHSKEKPQTYIKKSEKASP---ELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNH 296
F H P + P ++ P R + EC ++++G C + + C+++H
Sbjct: 399 VPFQHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHH 458
Query: 297 P-DPVADEGS 305
P PV G+
Sbjct: 459 PRSPVPPAGA 468
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 48 PDGNGDSQGTKHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFV 107
P+ G Q EYP RP +C ++++G+CKF CK++HP + G +
Sbjct: 417 PEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLGLPI 476
Query: 108 GQHLGQIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKS 145
Q C +Y G CK G AC + H S V +
Sbjct: 477 KPD--QPVCTYYGRYGVCKFGPACAYNHPFNFSPVPAA 512
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHP 416
FP RPGEP C Y++K G+C++ CKF+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 16/94 (17%)
Query: 112 GQIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKS-VLNAFNLPIKLESKGEGLMEKTVQI 170
GQ +C+ + +G CK C++ H +S V + L+ LPIK + Q
Sbjct: 435 GQPECQHFVKSGFCKFRMKCKYHHP--RSPVPPAGALSPLGLPIKPD-----------QP 481
Query: 171 QCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSG 204
C +Y R CK G AC ++H S P+P +G
Sbjct: 482 VCTYYGRYGVCKFGPACAYNHPFNFS--PVPAAG 513
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 268 LPIRVHEIECPFYMRNGSCAYGVDCRFNHP 297
P R E +C +Y++ GSC +G+ C+FNHP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
>sp|Q94AD9|C3H3_ARATH Zinc finger CCCH domain-containing protein 3 OS=Arabidopsis
thaliana GN=At1g04990 PE=2 SV=1
Length = 404
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 122/256 (47%), Gaps = 32/256 (12%)
Query: 172 CKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSA 231
C+FY RT C +G +CR++H T LP A +E L E G C+Y L
Sbjct: 53 CQFYLRTGLCGYGSSCRYNHPTH-----LPQDVAYYKEE-----LPERIGQPDCEYFLKT 102
Query: 232 GGCKYGNSCKFSHSKEKPQTYIKKSEKASPEL-NFLGLPIRVHEIECPFYMRNGSCAYGV 290
G CKYG +CK+ H K++ A P + N +GLP+R+ E CP+Y+R G+C +GV
Sbjct: 103 GACKYGPTCKYHHPKDR--------NGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGV 154
Query: 291 DCRFNHPDPVADEG-SDPFNEASDPAS-RSWSPDIISRKTVPNLDNHSFHPHWMLKSKFN 348
C+F+HP P D G S + +S PA+ ++ + T L P + +
Sbjct: 155 ACKFHHPQP--DNGHSTAYGMSSFPAADLRYASGLTMMSTYGTLPRPQV-PQSYVPILVS 211
Query: 349 SLQGSVYPQAKAELPLSSPALGNLTK-------TADTSTYHQFNE-FPERPGEPLCDYFM 400
QG + PQ A +S ++ N+ +A + N E +P C +FM
Sbjct: 212 PSQGFLPPQGWAPYMAASNSMYNVKNQPYYSGSSASMAMAVALNRGLSESSDQPECRFFM 271
Query: 401 KTGNCKYRSACKFHHP 416
TG CKY CK+ HP
Sbjct: 272 NTGTCKYGDDCKYSHP 287
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 109/264 (41%), Gaps = 47/264 (17%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHP--VRGDFQGLKENERGGFVGQHLGQIQCKF 118
YP RP DC FYLRTG C +G C++NHP + D KE + + +GQ C++
Sbjct: 44 YPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKEE-----LPERIGQPDCEY 98
Query: 119 YQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFYQRT 178
+ TG CK+G C++ H +++ + N LP++L K C +Y RT
Sbjct: 99 FLKTGACKYGPTCKYHHPKDRNGAQPVMFNVIGLPMRLGEK-----------PCPYYLRT 147
Query: 179 EGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYH---------- 228
C+ G AC+F H + + S A GM L +GL +
Sbjct: 148 GTCRFGVACKFHHPQPDNGH----STAYGMSSFPAADLRYASGLTMMSTYGTLPRPQVPQ 203
Query: 229 -------------LSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFL--GLPIRVH 273
L G + S K Q Y S + L GL
Sbjct: 204 SYVPILVSPSQGFLPPQGWAPYMAASNSMYNVKNQPYYSGSSASMAMAVALNRGLSESSD 263
Query: 274 EIECPFYMRNGSCAYGVDCRFNHP 297
+ EC F+M G+C YG DC+++HP
Sbjct: 264 QPECRFFMNTGTCKYGDDCKYSHP 287
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 26/258 (10%)
Query: 58 KHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPV-RGDFQGLKENERGGFVGQHLGQIQC 116
K E P R DC ++L+TG CK+G CK++HP R Q + N G + LG+ C
Sbjct: 84 KEELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQPVMFNVIG--LPMRLGEKPC 141
Query: 117 KFYQSTGGCKHGEACRFKHSIEKSEVSKSV-LNAFNLPIKLESKGEGLMEK-----TVQI 170
+Y TG C+ G AC+F H + S + +++F + G +M Q+
Sbjct: 142 PYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAADLRYASGLTMMSTYGTLPRPQV 201
Query: 171 QCKFYQRTEGCKHG--------EACRFSHSTEKSENPLPFSGAN---GMKESKGGSLVEM 219
+ G S+S +N +SG++ M + L E
Sbjct: 202 PQSYVPILVSPSQGFLPPQGWAPYMAASNSMYNVKNQPYYSGSSASMAMAVALNRGLSES 261
Query: 220 TGLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPF 279
+ C++ ++ G CKYG+ CK+SH ++ S+ +N LP R + C
Sbjct: 262 SDQPECRFFMNTGTCKYGDDCKYSHPG------VRISQPPPSLINPFVLPARPGQPACGN 315
Query: 280 YMRNGSCAYGVDCRFNHP 297
+ G C +G +C+F+HP
Sbjct: 316 FRSYGFCKFGPNCKFDHP 333
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 386 EFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDGKSPV 425
E PER G+P C+YF+KTG CKY CK+HHPK+ +G PV
Sbjct: 86 ELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQPV 125
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 39/174 (22%)
Query: 253 IKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEAS 312
+K +E ELN P R E +C FY+R G C YG CR+NH P +
Sbjct: 31 MKVNETGVEELN--PYPDRPGERDCQFYLRTGLCGYGSSCRYNH----------PTHLPQ 78
Query: 313 DPASRSWSPDIISRKTVPNLDNHSFHPHWMLKS---KFNSLQGSVYPQAKAELPLSSPAL 369
D A + ++ R P+ + + LK+ K+ +P+ + + P +
Sbjct: 79 DVAY--YKEELPERIGQPDCE-------YFLKTGACKYGPTCKYHHPKDRNG---AQPVM 126
Query: 370 GNLTKTADTSTYHQFNEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDGKS 423
N+ P R GE C Y+++TG C++ ACKFHHP+ +G S
Sbjct: 127 FNVIG------------LPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDNGHS 168
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 19/99 (19%)
Query: 113 QIQCKFYQSTGGCKHGEACRFKHS-IEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQ 171
Q +C+F+ +TG CK+G+ C++ H + S+ S++N F LP + Q
Sbjct: 264 QPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLP-----------ARPGQPA 312
Query: 172 CKFYQRTEGCKHGEACRFSHS-------TEKSENPLPFS 203
C ++ CK G C+F H T + P PF+
Sbjct: 313 CGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSLPTPFA 351
Score = 35.8 bits (81), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHP 416
P RPG+P C F G CK+ CKF HP
Sbjct: 304 LPARPGQPACGNFRSYGFCKFGPNCKFDHP 333
Score = 32.7 bits (73), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 62 PSRPFAEDCPFYLRTGYCKFGFCCKFNHPV 91
P+RP C + G+CKFG CKF+HP+
Sbjct: 305 PARPGQPACGNFRSYGFCKFGPNCKFDHPM 334
>sp|Q5NAV3|C3H5_ORYSJ Zinc finger CCCH domain-containing protein 5 OS=Oryza sativa subsp.
japonica GN=Os01g0257400 PE=2 SV=1
Length = 466
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 134/293 (45%), Gaps = 52/293 (17%)
Query: 163 LMEKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGL 222
L E+ + C +Y RT C +GE CR++H +++ + +G G K + E G
Sbjct: 48 LPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAV-LNG--GGKTTHSAEYPERPGQ 104
Query: 223 IGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMR 282
C+Y++ G CK+G++CK+ H +E + LN G P+R E +C +Y++
Sbjct: 105 PVCEYYMKNGTCKFGSNCKYDHPREGSVQAVM--------LNSSGYPLRSGEKDCTYYVK 156
Query: 283 NGSCAYGVDCRFNHPD---------------PVADEGSDPFNEAS------DPA------ 315
G C +G C+F+HP+ P S P+ + P
Sbjct: 157 TGHCKFGSTCKFHHPEIGGVSETPNMYPPVQPQPISSSHPYQHLAGWQMGRPPVLPGSFL 216
Query: 316 SRSWSPDIISRKTVPNLDNHSFHPHWMLKSKFNSLQGSVYPQAKAELPLS----SPALGN 371
S S+ P ++ VP ++P+ ++ S G QA LS S A+
Sbjct: 217 SGSYPPMMLPSTVVP---MQGWNPYISPVNQVASAGGHQTVQAGPFYGLSHQGPSAAVTY 273
Query: 372 LTKTADTSTYH-------QFNEFPERPGEPLCDYFMKTGNCKYRSACKFHHPK 417
++ A S+ Q FP RPG+P C Y++KTG+CK+ SACK+HHP+
Sbjct: 274 GSQYAPLSSSTMPSSSSKQEPAFPARPGQPECQYYLKTGSCKFGSACKYHHPQ 326
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 131/308 (42%), Gaps = 38/308 (12%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQ 120
YP R +DC +Y++TG+CKFG CKF+HP + G+ E Q YQ
Sbjct: 142 YPLRSGEKDCTYYVKTGHCKFGSTCKFHHP---EIGGVSETPNMYPPVQPQPISSSHPYQ 198
Query: 121 STGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIK--------LESKGEGLMEKTVQIQC 172
G + G S +L + +P++ + +TVQ
Sbjct: 199 HLAGWQMGRPPVLPGSFLSGSYPPMMLPSTVVPMQGWNPYISPVNQVASAGGHQTVQAG- 257
Query: 173 KFYQRTEGCKH-GEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSA 231
FY G H G + ++ ++ + PL S + + G C+Y+L
Sbjct: 258 PFY----GLSHQGPSAAVTYGSQYA--PLSSSTMPSSSSKQEPAFPARPGQPECQYYLKT 311
Query: 232 GGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVD 291
G CK+G++CK+ H + Y+ + K++ L+ LGLP+R C +Y ++G C +G
Sbjct: 312 GSCKFGSACKYHHPQ-----YLN-TPKSNCMLSPLGLPLRPGSQPCAYYTQHGFCKFGPT 365
Query: 292 CRFNHP------DPVADEGSDPFNEASDPASRSWSPDIISRKTVPNLDNHSFHPHWMLKS 345
C+F+HP P A +D A P + + +P P + P ++L
Sbjct: 366 CKFDHPMGTLSYSPSASSITD-LPIAPYPLNYAVAP------VAPPSSSSDLRPEYLLTK 418
Query: 346 KFNSLQGS 353
+F++ Q +
Sbjct: 419 EFSANQSA 426
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 111/290 (38%), Gaps = 65/290 (22%)
Query: 62 PSRPFAEDCPFYLRTGYCKFGFCCKFNHP----VRGDFQGLKENERGGFVGQHLGQIQCK 117
P RP DC +YLRTG C +G C++NHP G + + GQ C+
Sbjct: 49 PERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEYPERPGQPVCE 108
Query: 118 FYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFYQR 177
+Y G CK G C++ H E S V +LN+ P++ K C +Y +
Sbjct: 109 YYMKNGTCKFGSNCKYDHPREGS-VQAVMLNSSGYPLRSGEK-----------DCTYYVK 156
Query: 178 TEGCKHGEACRFSH----STEKSEN------PLPFSGANGMKESKG-------------- 213
T CK G C+F H ++ N P P S ++ + G
Sbjct: 157 TGHCKFGSTCKFHHPEIGGVSETPNMYPPVQPQPISSSHPYQHLAGWQMGRPPVLPGSFL 216
Query: 214 ----------GSLVEMTG----LIGCKYHLSAGGCKYGNSCKF-SHSKEKPQTYIKKSEK 258
++V M G + SAGG + + F S + P + +
Sbjct: 217 SGSYPPMMLPSTVVPMQGWNPYISPVNQVASAGGHQTVQAGPFYGLSHQGPSAAVTYGSQ 276
Query: 259 ASPELNFL----------GLPIRVHEIECPFYMRNGSCAYGVDCRFNHPD 298
+P + P R + EC +Y++ GSC +G C+++HP
Sbjct: 277 YAPLSSSTMPSSSSKQEPAFPARPGQPECQYYLKTGSCKFGSACKYHHPQ 326
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 214 GSLVEMTGLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVH 273
G L E G C Y+L G C YG +C+++H +++ + + + P R
Sbjct: 46 GRLPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKT--THSAEYPERPG 103
Query: 274 EIECPFYMRNGSCAYGVDCRFNHP 297
+ C +YM+NG+C +G +C+++HP
Sbjct: 104 QPVCEYYMKNGTCKFGSNCKYDHP 127
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 386 EFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGD 420
E+PERPG+P+C+Y+MK G CK+ S CK+ HP+ G
Sbjct: 97 EYPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGS 131
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHPKNG 419
+P R GE C Y++KTG+CK+ S CKFHHP+ G
Sbjct: 142 YPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEIG 174
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Query: 386 EFPERPGEPLCDYFMKTGNCKYRSACKFHHPK--------NGDGKS 423
PERPGE C Y+++TG C Y C+++HP+ NG GK+
Sbjct: 47 RLPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKT 92
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDGKSP 424
P RPG C Y+ + G CK+ CKF HP SP
Sbjct: 342 LPLRPGSQPCAYYTQHGFCKFGPTCKFDHPMGTLSYSP 379
>sp|O48772|C3H26_ARATH Zinc finger CCCH domain-containing protein 26 OS=Arabidopsis
thaliana GN=ZFN2 PE=2 SV=1
Length = 453
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 122/280 (43%), Gaps = 61/280 (21%)
Query: 172 CKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSA 231
C+F+ RT C +G +CR++H P + L E G C+
Sbjct: 50 CQFFLRTGQCGYGNSCRYNH---------PLTNLPQGIIYYRDQLPERVGQPDCE----T 96
Query: 232 GGCKYGNSCKFSHSKEKPQTYIKKSEKASPEL-NFLGLPIRVHEIECPFYMRNGSCAYGV 290
G CKYG +CK+ H K++ A P L N LGLP+R E CP+YM+ G C +GV
Sbjct: 97 GACKYGPTCKYHHPKDR--------NGAGPVLFNVLGLPMRQGEKPCPYYMQTGLCRFGV 148
Query: 291 DCRFNHPDP------------VADEGSDPFNEASDPASRSWSPDI---ISRKTVPNLDNH 335
C+F+HP P ++ S F AS S P I R VP +
Sbjct: 149 ACKFHHPHPHSQPSNGHSAYAMSSFPSVGFPYASGMTMVSLPPATYGAIPRPQVPQ--SQ 206
Query: 336 SFHPHWMLKSKFNSLQGSVYPQAKAELPLSSPALGNLTKTADTST-----------YHQF 384
++ P+ + S QG + PQ A +S + N+ D+S+ +H F
Sbjct: 207 AYMPYMVAPS-----QGLLPPQGWATYMTASNPIYNMKTQLDSSSSASVAVTVTSHHHSF 261
Query: 385 NEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDGKSP 424
+E E C +FM TG CKY CK+ HPK +SP
Sbjct: 262 SERAE------CRFFMNTGTCKYGDDCKYSHPKERLLQSP 295
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 51 NGDSQGTKHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQH 110
N D+ YP RP DC F+LRTG C +G C++NHP+ QG+ + +
Sbjct: 31 NEDNMEQSSPYPDRPGERDCQFFLRTGQCGYGNSCRYNHPLTNLPQGIIYYRDQ--LPER 88
Query: 111 LGQIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQI 170
+GQ C+ TG CK+G C++ H +++ + N LP++ K
Sbjct: 89 VGQPDCE----TGACKYGPTCKYHHPKDRNGAGPVLFNVLGLPMRQGEK----------- 133
Query: 171 QCKFYQRTEGCKHGEACRFSHSTEKSE 197
C +Y +T C+ G AC+F H S+
Sbjct: 134 PCPYYMQTGLCRFGVACKFHHPHPHSQ 160
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 225 CKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNG 284
C++ ++ G CKYG+ CK+SH KE+ + +S LN + LP R + C + G
Sbjct: 267 CRFFMNTGTCKYGDDCKYSHPKER----LLQSPPTL--LNPIVLPARPGQPACGNFKAYG 320
Query: 285 SCAYGVDCRFNH 296
C +G +C+F+H
Sbjct: 321 FCKFGANCKFDH 332
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%)
Query: 69 DCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQSTGGCKHG 128
+C F++ TG CK+G CK++HP Q + GQ C +++ G CK G
Sbjct: 266 ECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFG 325
Query: 129 EACRFKHSIEKSEVSKSVLNAFNLPI 154
C+F HS+ + + + L +LP
Sbjct: 326 ANCKFDHSMLLNPYNNTGLAMSSLPT 351
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 81/216 (37%), Gaps = 41/216 (18%)
Query: 62 PSRPFAEDCPFYLRTGYCKFGFCCKFN--HPVRGDFQGLKENERGGFVGQHLGQIQCKFY 119
P R + CP+Y++TG C+FG CKF+ HP G F
Sbjct: 127 PMRQGEKPCPYYMQTGLCRFGVACKFHHPHPHSQPSNGHSAYAMSSFPSVGFPYASGMTM 186
Query: 120 QSTGGCKHGEACRFKHSIEKSEVSKSVLNA---------------------FNLPIKLES 158
S +G R + + +S+ + A +N+ +L+S
Sbjct: 187 VSLPPATYGAIPRPQ--VPQSQAYMPYMVAPSQGLLPPQGWATYMTASNPIYNMKTQLDS 244
Query: 159 KGEGLMEK---------TVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMK 209
+ + + +C+F+ T CK+G+ C++SH E+ P + N +
Sbjct: 245 SSSASVAVTVTSHHHSFSERAECRFFMNTGTCKYGDDCKYSHPKERLLQ-SPPTLLNPI- 302
Query: 210 ESKGGSLVEMTGLIGCKYHLSAGGCKYGNSCKFSHS 245
L G C + G CK+G +CKF HS
Sbjct: 303 -----VLPARPGQPACGNFKAYGFCKFGANCKFDHS 333
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 372 LTKTADTSTYHQFNEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDGKSPV 425
LT Y++ ++ PER G+P C+ TG CKY CK+HHPK+ +G PV
Sbjct: 71 LTNLPQGIIYYR-DQLPERVGQPDCE----TGACKYGPTCKYHHPKDRNGAGPV 119
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 383 QFNEFPERPGEPLCDYFMKTGNCKYRSACKFHHP 416
Q + +P+RPGE C +F++TG C Y ++C+++HP
Sbjct: 37 QSSPYPDRPGERDCQFFLRTGQCGYGNSCRYNHP 70
Score = 39.7 bits (91), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 269 PIRVHEIECPFYMRNGSCAYGVDCRFNHP 297
P R E +C F++R G C YG CR+NHP
Sbjct: 42 PDRPGERDCQFFLRTGQCGYGNSCRYNHP 70
>sp|Q5Z5Q3|C3H43_ORYSJ Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa
subsp. japonica GN=Os06g0520600 PE=2 SV=1
Length = 711
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 22/146 (15%)
Query: 172 CKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSA 231
C +Y + CK G +C ++H +P P GA+ K ++ G C Y++
Sbjct: 50 CSYYVKFGSCKFGISCVYNHP-----DPRPQHGADDKKPAE--QFPRRPGEPDCSYYVKF 102
Query: 232 GGCKYGNSCKFSHSKEKP----QTYIK-----------KSEKASPELNFLGLPIRVHEIE 276
G CK+G +C+F+H P Q Y KS+ +LN LGLP+R
Sbjct: 103 GSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGTGL 162
Query: 277 CPFYMRNGSCAYGVDCRFNHPDPVAD 302
C +YM G C +G +C+F+HPDP +D
Sbjct: 163 CSYYMNRGICKFGTNCKFDHPDPGSD 188
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 69/166 (41%), Gaps = 33/166 (19%)
Query: 48 PDGNGDSQGTKHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFV 107
P G ++ + ++P RP DC +Y++ G CKFG C +NHP G + +
Sbjct: 28 PPVAGKTKKVEEQHPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQF 87
Query: 108 GQHLGQIQCKFYQSTGGCKHGEACRFKHS---------------------IE-KSEVSKS 145
+ G+ C +Y G CK G CRF H IE KS+V +
Sbjct: 88 PRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQV 147
Query: 146 VLNAFNLPIKLESKGEGLMEKTVQIQCKFYQRTEGCKHGEACRFSH 191
LN LP++ G GL C +Y CK G C+F H
Sbjct: 148 KLNVLGLPLR---PGTGL--------CSYYMNRGICKFGTNCKFDH 182
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 64/163 (39%), Gaps = 30/163 (18%)
Query: 269 PIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEASDPASRSWSPDIISRKT 328
P R E +C +Y++ GSC +G+ C +NHPDP G+D A R PD
Sbjct: 42 PRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDC----- 96
Query: 329 VPNLDNHSFHP-----HWMLKSKFNSLQGSVYPQAKAELPLSSPALGNLT-------KTA 376
S++ + + +FN +P P GN K+
Sbjct: 97 -------SYYVKFGSCKFGMNCRFN------HPPRMPVPPQQEYFSGNACHCHHIEGKSK 143
Query: 377 DTSTYHQFNEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNG 419
P RPG LC Y+M G CK+ + CKF HP G
Sbjct: 144 VEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDPG 186
>sp|Q0DBW8|C3H42_ORYSJ Zinc finger CCCH domain-containing protein 42 OS=Oryza sativa
subsp. japonica GN=Os06g0519400 PE=2 SV=1
Length = 279
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 73/196 (37%), Gaps = 49/196 (25%)
Query: 32 SKEFEKNVALTEESYNPDGNGDSQGTK--------HEYPSRPFAEDCPFYLRTGYCKFGF 83
S++ + T + P G S G EYP RP DC +Y+ G CKFG
Sbjct: 39 SQQHASSTVKTLDDRRPAGTSSSAGETEPKAAVEPQEYPRRPGVPDCSYYVEFGSCKFGM 98
Query: 84 CCKFNHPVR--GDFQGLKENERGGFVGQHLGQIQCKFYQSTGGCKHGEACRFKHSIE--- 138
C +NHP + G L+ +R G+ C Y G CK+G CRF H +
Sbjct: 99 RCLYNHPAKHAGGCDKLEHPQRP-------GEHDCLHYLRFGRCKYGMNCRFNHPPDRLP 151
Query: 139 ------------------KSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFYQRTEG 180
KSE LN LP++ G GL C +Y
Sbjct: 152 QQQVYFPWKACHCHHSEGKSEAEHVKLNFLGLPLR---PGTGL--------CSYYMNRGI 200
Query: 181 CKHGEACRFSHSTEKS 196
CK G C+F H S
Sbjct: 201 CKFGSNCKFHHPNSGS 216
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 26/141 (18%)
Query: 172 CKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSA 231
C +Y CK G C ++H + + G + ++ + G C ++L
Sbjct: 85 CSYYVEFGSCKFGMRCLYNHPAKHA------GGCDKLEHP------QRPGEHDCLHYLRF 132
Query: 232 GGCKYGNSCKFSHSKEK-PQTYI-------------KKSEKASPELNFLGLPIRVHEIEC 277
G CKYG +C+F+H ++ PQ + KSE +LNFLGLP+R C
Sbjct: 133 GRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGLPLRPGTGLC 192
Query: 278 PFYMRNGSCAYGVDCRFNHPD 298
+YM G C +G +C+F+HP+
Sbjct: 193 SYYMNRGICKFGSNCKFHHPN 213
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 14/154 (9%)
Query: 269 PIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEASDPASRSWSPDIISRKT 328
P R +C +Y+ GSC +G+ C +NHP A G D P D +
Sbjct: 77 PRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKHAG-GCDKLEHPQRPGEH----DCLHYLR 131
Query: 329 VPNLDNHSFHPHWMLKSKFNSLQGSVYPQAKAELPLSSPALGNLT-KTADTSTYHQFNEF 387
+ + +FN + PQ + P + + K+ F
Sbjct: 132 FGRCK-------YGMNCRFNHPPDRL-PQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGL 183
Query: 388 PERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDG 421
P RPG LC Y+M G CK+ S CKFHHP +G G
Sbjct: 184 PLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSG 217
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 11/77 (14%)
Query: 221 GLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFY 280
G+ C Y++ G CK+G C ++H P + +K L P R E +C Y
Sbjct: 81 GVPDCSYYVEFGSCKFGMRCLYNH----PAKHAGGCDK-------LEHPQRPGEHDCLHY 129
Query: 281 MRNGSCAYGVDCRFNHP 297
+R G C YG++CRFNHP
Sbjct: 130 LRFGRCKYGMNCRFNHP 146
Score = 39.3 bits (90), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 386 EFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDG 421
E+P RPG P C Y+++ G+CK+ C ++HP G
Sbjct: 75 EYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKHAG 110
>sp|Q3ECU8|C3H13_ARATH Zinc finger CCCH domain-containing protein 13 OS=Arabidopsis
thaliana GN=At1g48195 PE=4 SV=1
Length = 82
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 386 EFPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDGKSPVCTW 428
+FPERPGEP C Y+++TGNC + CK+HHPKN P CT
Sbjct: 5 KFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTL 47
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 218 EMTGLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIEC 277
E G C Y+L G C +CK+ H K I SE LN GLP+R + C
Sbjct: 8 ERPGEPECSYYLRTGNCYLKQNCKYHHPKN-----ITPSEPQC-TLNDKGLPLRPGQAIC 61
Query: 278 PFYMRNGSCAYGVDCRFNH 296
P Y R G C G C+F+H
Sbjct: 62 PHYSRFGICRSGPTCKFDH 80
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 57 TKHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHP--VRGDFQGLKENERGGFVGQHLGQI 114
++ ++P RP +C +YLRTG C CK++HP + N++G + GQ
Sbjct: 2 SEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKG--LPLRPGQA 59
Query: 115 QCKFYQSTGGCKHGEACRFKH 135
C Y G C+ G C+F H
Sbjct: 60 ICPHYSRFGICRSGPTCKFDH 80
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 14/84 (16%)
Query: 112 GQIQCKFYQSTGGCKHGEACRFKH--SIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQ 169
G+ +C +Y TG C + C++ H +I SE + LN LP++ Q
Sbjct: 11 GEPECSYYLRTGNCYLKQNCKYHHPKNITPSE-PQCTLNDKGLPLR-----------PGQ 58
Query: 170 IQCKFYQRTEGCKHGEACRFSHST 193
C Y R C+ G C+F H T
Sbjct: 59 AICPHYSRFGICRSGPTCKFDHFT 82
>sp|A3CEM4|C3H64_ORYSJ Putative zinc finger CCCH domain-containing protein 64 OS=Oryza
sativa subsp. japonica GN=Os12g0129500 PE=4 SV=2
Length = 527
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 370 GNLTKTADTSTYHQFNEFPERPGEPLCDYFMKTGNCKYRSACKFHHPKN 418
N+ K S + ++PERPGEP C Y+MK G CK+ + CK++HPK+
Sbjct: 193 ANVIKAGVISLLGKLVQYPERPGEPFCRYYMKFGECKHMTFCKYNHPKD 241
Score = 35.0 bits (79), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 56 GTKHEYPSRPFAEDCPFYLRTGYCKFGFCCKFNHP 90
G +YP RP C +Y++ G CK CK+NHP
Sbjct: 205 GKLVQYPERPGEPFCRYYMKFGECKHMTFCKYNHP 239
>sp|Q9C7P4|C3H9_ARATH Putative zinc finger CCCH domain-containing protein 9
OS=Arabidopsis thaliana GN=At1g29570 PE=4 SV=1
Length = 321
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPV 91
YP RP +DC FYL+ G C++ C+FNHP
Sbjct: 52 YPVRPGKKDCQFYLKNGLCRYRSSCRFNHPT 82
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHPKNGDGKSPV 425
+P RPG+ C +++K G C+YRS+C+F+HP + PV
Sbjct: 52 YPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPV 90
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 9/52 (17%)
Query: 249 PQTYIKKSEK---ASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHP 297
PQ I+ E+ +SP P+R + +C FY++NG C Y CRFNHP
Sbjct: 36 PQDQIQSKERMRQSSP------YPVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
Score = 36.6 bits (83), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 221 GLIGCKYHLSAGGCKYGNSCKFSHSKEKPQ 250
G C+++L G C+Y +SC+F+H ++PQ
Sbjct: 57 GKKDCQFYLKNGLCRYRSSCRFNHPTQRPQ 86
>sp|Q8BYK8|ZC3H6_MOUSE Zinc finger CCCH domain-containing protein 6 OS=Mus musculus
GN=Zc3h6 PE=2 SV=2
Length = 1177
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 106 FVGQHL----GQIQCKFYQSTGGCKHGEACRFKHSIE---KSEVSKSVLNAFNLPIKLES 158
F+ QH G+ CK++ G C G+ C+F H E K EV K L + +
Sbjct: 262 FINQHTVEHKGKQICKYFLE-GRCIKGDHCKFNHDAELEKKKEVCKYYLQGYC------T 314
Query: 159 KGEGLMEKTVQIQCKFYQRTEGCKHGEACRFSH 191
KGE + + CKFY C G+ C+FSH
Sbjct: 315 KGENCIYMHSEFPCKFYHSGAKCYQGDKCKFSH 347
Score = 36.2 bits (82), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 26/85 (30%)
Query: 68 EDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQSTGGCKH 127
E C +YL+ GYC G C + H + CKFY S C
Sbjct: 303 EVCKYYLQ-GYCTKGENCIYMH----------------------SEFPCKFYHSGAKCYQ 339
Query: 128 GEACRFKHSIEKSEVSK---SVLNA 149
G+ C+F H E K VLNA
Sbjct: 340 GDKCKFSHDDLTKETRKLLDKVLNA 364
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 36/93 (38%), Gaps = 22/93 (23%)
Query: 217 VEMTGLIGCKYHLSAGGCKYGNSCKFSHSKEKP----------QTYIKKSEKASPELNFL 266
VE G CKY L G C G+ CKF+H E Q Y K E
Sbjct: 268 VEHKGKQICKYFLE-GRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENC------- 319
Query: 267 GLPIRVH-EIECPFYMRNGSCAYGVDCRFNHPD 298
I +H E C FY C G C+F+H D
Sbjct: 320 ---IYMHSEFPCKFYHSGAKCYQGDKCKFSHDD 349
>sp|A8NZY7|DUS3_COPC7 tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
GN=DUS3 PE=3 SV=1
Length = 676
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 17/87 (19%)
Query: 234 CKYGNSCKFSHS-----KEKPQ-------TYIKKSEKASPELNFLGLPIRVH-----EIE 276
C +G SC+F+H KEKPQ + K+S P+L +G P + H +
Sbjct: 93 CDFGTSCRFTHDIAEYIKEKPQDLRIPLLSEFKESPPYGPDLTVIGKPGKKHPNIDFSTK 152
Query: 277 CPFYMRNGSCAYGVDCRFNHPDPVADE 303
CP + +G C YG CR+ + DE
Sbjct: 153 CPVHEESGECRYGYKCRYMGGHALEDE 179
>sp|P61129|ZC3H6_HUMAN Zinc finger CCCH domain-containing protein 6 OS=Homo sapiens
GN=ZC3H6 PE=2 SV=2
Length = 1189
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 106 FVGQHL----GQIQCKFYQSTGGCKHGEACRFKHSIE---KSEVSKSVLNAFNLPIKLES 158
F+ QH G+ CK++ G C G+ C+F H E + E+ K L + +
Sbjct: 264 FINQHTVEHKGKQICKYFLE-GRCIKGDQCKFDHDAELEKRKEICKFYLQGYC------T 316
Query: 159 KGEGLMEKTVQIQCKFYQRTEGCKHGEACRFSH 191
KGE + + CKFY C G+ C+FSH
Sbjct: 317 KGENCIYMHNEFPCKFYHSGAKCYQGDNCKFSH 349
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 30/84 (35%), Gaps = 23/84 (27%)
Query: 68 EDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQSTGGCKH 127
E C FYL+ GYC G C + H + CKFY S C
Sbjct: 305 EICKFYLQ-GYCTKGENCIYMH----------------------NEFPCKFYHSGAKCYQ 341
Query: 128 GEACRFKHSIEKSEVSKSVLNAFN 151
G+ C+F H E K + N
Sbjct: 342 GDNCKFSHDDLTKETKKLLDKVLN 365
Score = 35.4 bits (80), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 36/93 (38%), Gaps = 22/93 (23%)
Query: 217 VEMTGLIGCKYHLSAGGCKYGNSCKFSHSKEKP----------QTYIKKSEKASPELNFL 266
VE G CKY L G C G+ CKF H E Q Y K E
Sbjct: 270 VEHKGKQICKYFLE-GRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENC------- 321
Query: 267 GLPIRVH-EIECPFYMRNGSCAYGVDCRFNHPD 298
I +H E C FY C G +C+F+H D
Sbjct: 322 ---IYMHNEFPCKFYHSGAKCYQGDNCKFSHDD 351
>sp|Q9TT91|MKRN1_MACEU E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii GN=MKRN1
PE=2 SV=1
Length = 478
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 26/107 (24%)
Query: 220 TGLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPF 279
T + C+Y + G CK GN+C++SH Q+ + C +
Sbjct: 52 TKQVTCRYFMH-GVCKKGNNCRYSHDLSTSQSAMV----------------------CRY 88
Query: 280 YMRNGSCAYGVDCRFNHPDPVADEGSDPFNEA--SDPASRSWSPDII 324
Y R G CAYG CR+ H P+ E N A SD + S P ++
Sbjct: 89 YQR-GCCAYGDRCRYEHTKPLKREEVTAANLAAKSDLPASSSLPALV 134
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 25/80 (31%)
Query: 167 TVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCK 226
T Q+ C+++ CK G CR+SH S++ + C+
Sbjct: 52 TKQVTCRYFMHG-VCKKGNNCRYSHDLSTSQSAMV-----------------------CR 87
Query: 227 YHLSAGGCKYGNSCKFSHSK 246
Y+ G C YG+ C++ H+K
Sbjct: 88 YY-QRGCCAYGDRCRYEHTK 106
Score = 32.0 bits (71), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 19/79 (24%)
Query: 73 YLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQSTGGCKHGEACR 132
Y G CK G C+++H + + C++YQ G C +G+ CR
Sbjct: 59 YFMHGVCKKGNNCRYSHDLSTSQSAMV----------------CRYYQR-GCCAYGDRCR 101
Query: 133 FKHS--IEKSEVSKSVLNA 149
++H+ +++ EV+ + L A
Sbjct: 102 YEHTKPLKREEVTAANLAA 120
>sp|Q9C7P1|C3H10_ARATH Putative zinc finger CCCH domain-containing protein 10
OS=Arabidopsis thaliana GN=At1g29600/At1g29610 PE=2 SV=2
Length = 389
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 YPSRPFAEDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQ 120
YP RP ++C FY++ C++G C +NHP L +I C+ +
Sbjct: 128 YPVRPGEDNCLFYMKNHLCEWGSECCYNHPP-------------------LQEIPCRIGK 168
Query: 121 ----STGGCKHGEACRFKHSIEK 139
G CK G C F H E+
Sbjct: 169 KLDCKAGACKRGSNCPFNHPKER 191
Score = 36.2 bits (82), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 269 PIRVHEIECPFYMRNGSCAYGVDCRFNHP 297
P+R E C FYM+N C +G +C +NHP
Sbjct: 129 PVRPGEDNCLFYMKNHLCEWGSECCYNHP 157
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 22/92 (23%)
Query: 172 CKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSA 231
C FY + C+ G C ++H L E+ IG K A
Sbjct: 137 CLFYMKNHLCEWGSECCYNHP----------------------PLQEIPCRIGKKLDCKA 174
Query: 232 GGCKYGNSCKFSHSKEKPQTYIKKSEKASPEL 263
G CK G++C F+H KE+ + + +P+L
Sbjct: 175 GACKRGSNCPFNHPKERDGDSLPMPQGRTPDL 206
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 387 FPERPGEPLCDYFMKTGNCKYRSACKFHHP 416
+P RPGE C ++MK C++ S C ++HP
Sbjct: 128 YPVRPGEDNCLFYMKNHLCEWGSECCYNHP 157
>sp|Q657B3|C3H7_ORYSJ Zinc finger CCCH domain-containing protein 7 OS=Oryza sativa subsp.
japonica GN=Os01g0572100 PE=2 SV=1
Length = 698
Score = 40.8 bits (94), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 205 ANGMKESKGGSLVEMTGLIGCKYHLSAGGCKYGNSCKFSH-----SKEKPQTYIKKSEKA 259
A G+K K +++ + C ++L G C+ GN CKFSH +K KP T+ +
Sbjct: 415 AEGVKRLKLQPVIKPKVVKVCHFYLH-GKCQQGNLCKFSHDTTPLTKSKPCTHYARGSC- 472
Query: 260 SPELNFLGLPIRVHEIE---CPFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEASDPAS 316
L P HE+ C +M NG C G C+F+H P A+ S P + S+ +S
Sbjct: 473 ---LKGDDCPYD-HELSKYPCHNFMENGMCIRGDKCKFSHVIPTAEGPSTPDAKKSNASS 528
Score = 32.3 bits (72), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 18/85 (21%)
Query: 70 CPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENE------RGGFV-------GQHLGQIQC 116
C FYL G C+ G CKF+H D L +++ RG + L + C
Sbjct: 435 CHFYLH-GKCQQGNLCKFSH----DTTPLTKSKPCTHYARGSCLKGDDCPYDHELSKYPC 489
Query: 117 KFYQSTGGCKHGEACRFKHSIEKSE 141
+ G C G+ C+F H I +E
Sbjct: 490 HNFMENGMCIRGDKCKFSHVIPTAE 514
>sp|Q5NU13|MKRN2_TAKRU Probable E3 ubiquitin-protein ligase makorin-2 OS=Takifugu rubripes
GN=mkrn2 PE=2 SV=1
Length = 402
Score = 40.0 bits (92), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 29/100 (29%)
Query: 220 TGLIGCKYHLSAGGCKYGNSCKFSH--SKEKPQTYIKKSEKASPELNFLGLPIRVHEIEC 277
T + C+Y L G C+ GN C+FSH S KP T C
Sbjct: 3 TKQVTCRYFLH-GVCREGNHCQFSHDPSSSKPSTI------------------------C 37
Query: 278 PFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEASDPASR 317
FY R G+CAYG CR++H ++ G F+ A +R
Sbjct: 38 KFYQR-GTCAYGERCRYDHVK-LSSRGGGAFDMAGVGGAR 75
Score = 32.3 bits (72), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 43/121 (35%), Gaps = 43/121 (35%)
Query: 113 QIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQC 172
Q+ C+++ G C+ G C+F H S+ S C
Sbjct: 5 QVTCRYFLH-GVCREGNHCQFSHDPSSSKPSTI--------------------------C 37
Query: 173 KFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSAG 232
KFYQR C +GE CR+ H S+GG +M G+ G + S
Sbjct: 38 KFYQRGT-CAYGERCRYDHVK---------------LSSRGGGAFDMAGVGGARDGASTR 81
Query: 233 G 233
G
Sbjct: 82 G 82
>sp|Q9JJ48|ZC3H8_MOUSE Zinc finger CCCH domain-containing protein 8 OS=Mus musculus
GN=Zc3h8 PE=1 SV=2
Length = 305
Score = 40.0 bits (92), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 14/95 (14%)
Query: 105 GFVGQHL----GQIQCKFYQSTGGCKHGEACRFKHSIE---KSEVSKSVLNAFNLPIKLE 157
GF+ QH G+ CK++ C G+ C+F H E K E+ K + +
Sbjct: 196 GFINQHTVERKGKQVCKYFLERK-CIKGDQCKFDHDAEIEKKKEMCKYYVQGYC------ 248
Query: 158 SKGEGLMEKTVQIQCKFYQRTEGCKHGEACRFSHS 192
+KGE + + CKFY C G+ C FSH+
Sbjct: 249 TKGENCLYLHSEYPCKFYHTGTKCYQGDHCNFSHA 283
>sp|Q8JFF3|MKRN1_SERQU Probable E3 ubiquitin-protein ligase makorin-1 OS=Seriola
quinqueradiata GN=mkrn1 PE=2 SV=1
Length = 435
Score = 40.0 bits (92), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 74/204 (36%), Gaps = 45/204 (22%)
Query: 105 GFVGQHLGQIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLM 164
G +G + C+++ G CK G+ CR+ H + S
Sbjct: 13 GVIGGWTKHVTCRYFMH-GLCKEGDNCRYSHDLTNS------------------------ 47
Query: 165 EKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIG 224
K + CKF+Q+ C G+ CRF H LP A M SL +
Sbjct: 48 -KPAAMICKFFQKG-NCVFGDRCRFEHCKPAKNEELP---APQMLPLPSASLAGPSDPEP 102
Query: 225 CKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELN------FLGLPI----RVHE 274
G + N+ +F Q Y ++E+A E + F P ++ +
Sbjct: 103 SGPTPVPGAQDWVNAAEFVPG----QPYCGRAEQAKVESSVPLIEEFDSYPAPDNKQLRK 158
Query: 275 IECPFYMRNGSCAYGVDCRFNHPD 298
CP Y G C YG++C + H D
Sbjct: 159 QLCP-YAAVGECRYGINCAYLHGD 181
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 27/92 (29%)
Query: 214 GSLVEMTGLIGCKYHLSAGGCKYGNSCKFSH--SKEKPQTYIKKSEKASPELNFLGLPIR 271
G + T + C+Y + G CK G++C++SH + KP I
Sbjct: 13 GVIGGWTKHVTCRYFMH-GLCKEGDNCRYSHDLTNSKPAAMI------------------ 53
Query: 272 VHEIECPFYMRNGSCAYGVDCRFNHPDPVADE 303
C F+ + G+C +G CRF H P +E
Sbjct: 54 -----CKFFQK-GNCVFGDRCRFEHCKPAKNE 79
>sp|O74463|YQC1_SCHPO Uncharacterized protein C1739.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1739.01 PE=1 SV=2
Length = 547
Score = 39.7 bits (91), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 27/94 (28%)
Query: 152 LPIKLESKGEGLMEKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKES 211
LP G ++ + CKF+ R C GE C FSHS E +E P+
Sbjct: 27 LPKNTPENGVSTVKNLQHVPCKFF-RNGTCTAGENCPFSHSLE-TERPI----------- 73
Query: 212 KGGSLVEMTGLIGCKYHLSAGGCKYGNSCKFSHS 245
CKY L G CK+G C SH+
Sbjct: 74 -------------CKYFL-KGNCKFGPKCALSHA 93
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 30/97 (30%)
Query: 102 ERGGFVGQHLGQIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGE 161
E G ++L + CKF+++ G C GE C F HS+E PI
Sbjct: 33 ENGVSTVKNLQHVPCKFFRN-GTCTAGENCPFSHSLETER-----------PI------- 73
Query: 162 GLMEKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSEN 198
CK++ + CK G C SH+ + N
Sbjct: 74 ----------CKYFLK-GNCKFGPKCALSHALPGNTN 99
>sp|A1CNY3|DUS3_ASPCL tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=dus3 PE=3 SV=1
Length = 728
Score = 39.7 bits (91), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 234 CKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFYMRNGSCAYGVDCR 293
CK+G+ C+F H +TY+K+ ++A F G+ CP + G C YG CR
Sbjct: 145 CKFGDRCRFEHDV---RTYLKEHKRAD-LTTFGGI--------CPLWEAKGRCPYGYKCR 192
Query: 294 F 294
F
Sbjct: 193 F 193
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 79 CKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQSTGGCKHGEACRF 133
CKFG C+F H VR LKE++R G I C +++ G C +G CRF
Sbjct: 145 CKFGDRCRFEHDVR---TYLKEHKRADLTT--FGGI-CPLWEAKGRCPYGYKCRF 193
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 15/70 (21%)
Query: 181 CKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSAGGCKYGNSC 240
CK G+ CRF H +KE K L G+ C + G C YG C
Sbjct: 145 CKFGDRCRFEHDVRTY-----------LKEHKRADLTTFGGI--CPLWEAKGRCPYGYKC 191
Query: 241 KF--SHSKEK 248
+F SH E+
Sbjct: 192 RFVGSHMTER 201
>sp|O22243|C3H31_ARATH Zinc finger CCCH domain-containing protein 31 OS=Arabidopsis
thaliana GN=At2g47680 PE=2 SV=2
Length = 1015
Score = 39.7 bits (91), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 18/71 (25%)
Query: 73 YLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQSTGGCKHGEACR 132
Y GYC G C F H ++ + CKF+ S+ GC++GE+C
Sbjct: 735 YFLNGYCNRGGQCTFTHTLQS------------------TRPACKFFASSQGCRNGESCL 776
Query: 133 FKHSIEKSEVS 143
F H++ + S
Sbjct: 777 FSHAMRRRTTS 787
Score = 35.4 bits (80), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 28/77 (36%)
Query: 119 YQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFYQRT 178
Y G C G C F H+++ + + CKF+ +
Sbjct: 735 YFLNGYCNRGGQCTFTHTLQSTRPA----------------------------CKFFASS 766
Query: 179 EGCKHGEACRFSHSTEK 195
+GC++GE+C FSH+ +
Sbjct: 767 QGCRNGESCLFSHAMRR 783
>sp|Q9H000|MKRN2_HUMAN Probable E3 ubiquitin-protein ligase makorin-2 OS=Homo sapiens
GN=MKRN2 PE=2 SV=2
Length = 416
Score = 38.9 bits (89), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 47/123 (38%), Gaps = 29/123 (23%)
Query: 220 TGLIGCKYHLSAGGCKYGNSCKFSH--SKEKPQTYIKKSEKASPELNFLGLPIRVHEIEC 277
T I C+Y + G C+ G+ C FSH + KP T K
Sbjct: 3 TKQITCRYFMH-GVCREGSQCLFSHDLANSKPSTICK----------------------- 38
Query: 278 PFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEA-SDPASRSWSPDIISRKTVPNLDNHS 336
Y + G CAYG CR++H P A G A S P+ SP S T + +S
Sbjct: 39 --YYQKGYCAYGTRCRYDHTRPSAAAGGAVGTMAHSVPSPAFHSPHPPSEVTASIVKTNS 96
Query: 337 FHP 339
P
Sbjct: 97 HEP 99
>sp|Q9SD61|C3H42_ARATH Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis
thaliana GN=At3g47120 PE=2 SV=1
Length = 352
Score = 38.5 bits (88), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 172 CKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSA 231
C+ +QR E C G++C+FSH +++ N G + SK G C+
Sbjct: 136 CRAFQRGE-CTRGDSCKFSHDEKRAANTGW--GHEEDRSSKWDHDKNREGRGVCRA-FQR 191
Query: 232 GGCKYGNSCKFSHSKEKPQT 251
G C G+SCKFSH +++ T
Sbjct: 192 GECTRGDSCKFSHDEKRAAT 211
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 116 CKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCKFY 175
C+ +Q G C G++C+F H + ++ + SK + + + C+ +
Sbjct: 136 CRAFQ-RGECTRGDSCKFSH-----DEKRAANTGWGHEEDRSSKWDHDKNREGRGVCRAF 189
Query: 176 QRTEGCKHGEACRFSHSTEKS 196
QR E C G++C+FSH +++
Sbjct: 190 QRGE-CTRGDSCKFSHDEKRA 209
Score = 32.0 bits (71), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
Query: 232 GGCKYGNSCKFSHSKEKPQTY-----IKKSEKASPELNFLGLPIRVHEIECPFYMRNGSC 286
G C G+SCKFSH +++ +S K + N G + C + R G C
Sbjct: 142 GECTRGDSCKFSHDEKRAANTGWGHEEDRSSKWDHDKNREGRGV------CRAFQR-GEC 194
Query: 287 AYGVDCRFNHPDPVA 301
G C+F+H + A
Sbjct: 195 TRGDSCKFSHDEKRA 209
>sp|Q8N5P1|ZC3H8_HUMAN Zinc finger CCCH domain-containing protein 8 OS=Homo sapiens
GN=ZC3H8 PE=1 SV=2
Length = 291
Score = 38.5 bits (88), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 14/95 (14%)
Query: 105 GFVGQHL----GQIQCKFYQSTGGCKHGEACRFKHSIE---KSEVSKSVLNAFNLPIKLE 157
F+ QH G+ CK++ C G+ C+F H E K E+ K + +
Sbjct: 182 AFINQHTVERKGKQICKYFLERK-CIKGDQCKFDHDAEIEKKKEMCKFYVQGYC------ 234
Query: 158 SKGEGLMEKTVQIQCKFYQRTEGCKHGEACRFSHS 192
++GE + + CKFY C GE C+FSH+
Sbjct: 235 TRGENCLYLHNEYPCKFYHTGTKCYQGEYCKFSHA 269
>sp|Q9UPT8|ZC3H4_HUMAN Zinc finger CCCH domain-containing protein 4 OS=Homo sapiens
GN=ZC3H4 PE=1 SV=3
Length = 1303
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 112 GQIQCKFYQSTGGCKHGEACRFKHSIE---KSEVSKSVLNAFNLPIKLESKGEGLMEKTV 168
G++ CK++ G C G+ C F H IE K E+ K + F ++ E
Sbjct: 392 GKVICKYFVE-GRCTWGDHCNFSHDIELPKKRELCKFYITGFC------ARAENCPYMHG 444
Query: 169 QIQCKFYQRTEGCKHGEACRFSH 191
CK Y T C +G+ C FSH
Sbjct: 445 DFPCKLYHTTGNCINGDDCMFSH 467
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 15/90 (16%)
Query: 221 GLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVH------- 273
G + CKY + G C +G+ C FSH E P KK E + G R
Sbjct: 392 GKVICKYFVE-GRCTWGDHCNFSHDIELP----KKRELC--KFYITGFCARAENCPYMHG 444
Query: 274 EIECPFYMRNGSCAYGVDCRFNHPDPVADE 303
+ C Y G+C G DC F+H DP+ +E
Sbjct: 445 DFPCKLYHTTGNCINGDDCMFSH-DPLTEE 473
Score = 36.2 bits (82), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 23/68 (33%)
Query: 68 EDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQSTGGCKH 127
E C FY+ TG+C C + H GDF CK Y +TG C +
Sbjct: 423 ELCKFYI-TGFCARAENCPYMH---GDFP-------------------CKLYHTTGNCIN 459
Query: 128 GEACRFKH 135
G+ C F H
Sbjct: 460 GDDCMFSH 467
>sp|Q6ZPZ3|ZC3H4_MOUSE Zinc finger CCCH domain-containing protein 4 OS=Mus musculus
GN=Zc3h4 PE=1 SV=2
Length = 1304
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 112 GQIQCKFYQSTGGCKHGEACRFKHSIE---KSEVSKSVLNAFNLPIKLESKGEGLMEKTV 168
G++ CK++ G C G+ C F H IE K E+ K + F ++ E
Sbjct: 391 GKVICKYF-VEGRCTWGDHCNFSHDIELPKKRELCKFYITGFC------ARAENCPYMHG 443
Query: 169 QIQCKFYQRTEGCKHGEACRFSH 191
CK Y T C +G+ C FSH
Sbjct: 444 DFPCKLYHTTGNCINGDDCMFSH 466
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 15/90 (16%)
Query: 221 GLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVH------- 273
G + CKY + G C +G+ C FSH E P KK E + G R
Sbjct: 391 GKVICKYFVE-GRCTWGDHCNFSHDIELP----KKRELC--KFYITGFCARAENCPYMHG 443
Query: 274 EIECPFYMRNGSCAYGVDCRFNHPDPVADE 303
+ C Y G+C G DC F+H DP+ +E
Sbjct: 444 DFPCKLYHTTGNCINGDDCMFSH-DPLTEE 472
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 23/68 (33%)
Query: 68 EDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQSTGGCKH 127
E C FY+ TG+C C + H GDF CK Y +TG C +
Sbjct: 422 ELCKFYI-TGFCARAENCPYMH---GDFP-------------------CKLYHTTGNCIN 458
Query: 128 GEACRFKH 135
G+ C F H
Sbjct: 459 GDDCMFSH 466
>sp|Q6GLD9|MKRN2_XENTR Probable E3 ubiquitin-protein ligase makorin-2 OS=Xenopus
tropicalis GN=mkrn2 PE=2 SV=1
Length = 418
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 81/222 (36%), Gaps = 62/222 (27%)
Query: 220 TGLIGCKYHLSAGGCKYGNSCKFSH--SKEKPQTYIKKSEKASPELNFLGLPIRVHEIEC 277
T + C+Y L G C+ G C FSH + KP T C
Sbjct: 3 TKHVTCRYFLH-GVCREGGRCLFSHDLATSKPSTV------------------------C 37
Query: 278 PFYMRNGSCAYGVDCRFNHPD--------------PVADEGSDPF---NEASDPASRSWS 320
FY R G CAYG CR++H P E + P EA+ P ++S +
Sbjct: 38 RFYQR-GQCAYGARCRYDHVKPCNGSVFYPPQEMAPAPLESTPPLLPTQEAAAPVTKS-A 95
Query: 321 PDIISRKTVPNLDN-------HSFHPHWMLKSKFNSLQGSVYPQAKAELPLSSPALGNLT 373
P +K+V D HP L+ + +AK L + G L
Sbjct: 96 PQRREKKSVVLRDRDLCGASVEKAHPDPALRPGCAADPPVSELEAKPHSYLEAICTG-LD 154
Query: 374 KTADTSTYHQFNEFPERPGEPLCDYFMKTGNCKYRSACKFHH 415
+T S Y P+ P + LC F + G C Y +C + H
Sbjct: 155 ETPIPSAY------PDAPQQ-LCP-FAQAGGCHYGESCPYIH 188
>sp|Q8GVZ8|C3H48_ORYSJ Putative zinc finger CCCH domain-containing protein 48 OS=Oryza
sativa subsp. japonica GN=Os07g0139000 PE=4 SV=1
Length = 496
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
Query: 156 LESKGEGLMEKTVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGS 215
L+ GL E ++ ++Y R GC G C+++H + + S E S
Sbjct: 368 LQQLAFGLEEHKTKLCAEYYSRGLGCPRGNTCKYAHGEDDLRLVVAVSSLADAGEGSSSS 427
Query: 216 LVEMTGLIG--------CKYHLSAGGCKYGNSCKFSHSK 246
L G CK S G C + +C+F+H +
Sbjct: 428 DSSFAALGGEDKYKTKLCKTFTSGGLCLFAANCRFAHGE 466
>sp|Q1EHT7|C3H4_ORYSJ Zinc finger CCCH domain-containing protein 4 OS=Oryza sativa subsp.
japonica GN=Os01g0256800 PE=2 SV=1
Length = 1007
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 26/74 (35%)
Query: 171 QCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLS 230
C F+ C G+ C FSHS S P P CK+ L+
Sbjct: 728 MCVFFLNG-SCNRGDTCHFSHS---SRAPRPI----------------------CKFFLT 761
Query: 231 AGGCKYGNSCKFSH 244
GC+ GNSC FSH
Sbjct: 762 LQGCRNGNSCSFSH 775
Score = 35.8 bits (81), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 29/89 (32%)
Query: 105 GFVGQHLGQIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLM 164
G+V L C F+ + G C G+ C F HS PI
Sbjct: 718 GYVQPALENEMCVFFLN-GSCNRGDTCHFSHSSRAPR-----------PI---------- 755
Query: 165 EKTVQIQCKFYQRTEGCKHGEACRFSHST 193
CKF+ +GC++G +C FSH +
Sbjct: 756 -------CKFFLTLQGCRNGNSCSFSHDS 777
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 32/120 (26%)
Query: 68 EDCPFYLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQSTGGCKH 127
E C F+L G C G C F+H R + CKF+ + GC++
Sbjct: 727 EMCVFFL-NGSCNRGDTCHFSHSSRAP------------------RPICKFFLTLQGCRN 767
Query: 128 GEACRFKH---SIEKSEVSKSVLNAFNLPIK------LESKGEG----LMEKTVQIQCKF 174
G +C F H S+ S ++ + + N L + G+G + +K++Q CK
Sbjct: 768 GNSCSFSHDSGSLVSSSITSGICSQENRATSVCCKRLLPAAGDGHILVMNDKSLQFACKL 827
>sp|Q7F8R0|C3H14_ORYSJ Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa
subsp. japonica GN=Os02g0194200 PE=2 SV=1
Length = 300
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 10/95 (10%)
Query: 116 CKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKG---------EGLMEK 166
C + ST GC GE C F H + + + P G +G
Sbjct: 39 CTKFFSTSGCPFGEGCHFLHHFPGGYQAVAKMTNLGGPAIAPPPGRMPMGNAVPDGPPTP 98
Query: 167 TVQIQ-CKFYQRTEGCKHGEACRFSHSTEKSENPL 200
TV+ + C Y EGCK G+ C F+H + P+
Sbjct: 99 TVKTRLCNKYNTAEGCKWGDKCHFAHGERELGKPM 133
>sp|Q5NU14|MKRN1_TAKRU Probable E3 ubiquitin-protein ligase makorin-1 OS=Takifugu rubripes
GN=mkrn1 PE=2 SV=1
Length = 429
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 80/219 (36%), Gaps = 53/219 (24%)
Query: 208 MKESKGGSLVEM------TGLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASP 261
M E+ S V + T + C+Y + G CK G++C++SH + S+ A+
Sbjct: 1 MAEAAVASTVTLPVTGGWTKHVTCRYFMH-GLCKEGDNCRYSHD-------LTSSKPAA- 51
Query: 262 ELNFLGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDPVADEGSDPFNEASDPASRSWSP 321
+ C F+ + G+C +G CRF H P E E S+P S
Sbjct: 52 -------------MMCKFFQK-GNCVFGERCRFEHCKPTKSE------EVSNPQMLLLSS 91
Query: 322 -----DIISRKTVPNLDNHSFHPHWMLKSKFNSLQGSVYPQAKAELPLSSPALGNLTKTA 376
D ++ P L W ++F Q ++ +S P + L A
Sbjct: 92 TPPPIDPECSESGPRLKTQD----WANAAEFVPGQPYCGRAESVDVEISIPLIEELNGDA 147
Query: 377 DTSTYHQFNEFPERPGEPLCDYFMKTGNCKYRSACKFHH 415
T E + LC Y G C+Y C + H
Sbjct: 148 TTDK--------EELRKQLCPY-AAVGECRYGVNCAYLH 177
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 31/90 (34%)
Query: 114 IQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQIQCK 173
+ C+++ G CK G+ CR+ H + S K + CK
Sbjct: 22 VTCRYFMH-GLCKEGDNCRYSHDLTSS-------------------------KPAAMMCK 55
Query: 174 FYQRTEGCKHGEACRFSH----STEKSENP 199
F+Q+ C GE CRF H +E+ NP
Sbjct: 56 FFQKG-NCVFGERCRFEHCKPTKSEEVSNP 84
Score = 32.3 bits (72), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 63/179 (35%), Gaps = 34/179 (18%)
Query: 73 YLRTGYCKFGFCCKFNHPVRGDFQGLKENERGGFVGQHLGQIQCKFYQSTGGCKHGEACR 132
Y G CK G C+++H + CKF+Q G C GE CR
Sbjct: 26 YFMHGLCKEGDNCRYSH---------------DLTSSKPAAMMCKFFQK-GNCVFGERCR 69
Query: 133 FKH-----SIEKSEVSKSVLNAFNLPIKLESKGEGLMEKTVQI--QCKFYQRTEGCKHGE 185
F+H S E S +L++ PI E G KT +F C E
Sbjct: 70 FEHCKPTKSEEVSNPQMLLLSSTPPPIDPECSESGPRLKTQDWANAAEFVPGQPYCGRAE 129
Query: 186 ACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCKYHLSAGGCKYGNSCKFSH 244
+ S PL NG + L + C Y + G C+YG +C + H
Sbjct: 130 SVDVEISI-----PL-IEELNGDATTDKEELRKQL----CPY-AAVGECRYGVNCAYLH 177
>sp|Q7SGR2|YTH1_NEUCR mRNA 3'-end-processing protein yth-1 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=yth-1 PE=3 SV=1
Length = 317
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 24/81 (29%)
Query: 221 GLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPFY 280
G + CK+ L G CK G SC+F H E N +P EC F+
Sbjct: 95 GSLVCKHWLR-GLCKKGESCEFLH-----------------EYNLRKMP------ECNFF 130
Query: 281 MRNGSCAYGVDCRFNHPDPVA 301
+RNG C+ G +C + H DP++
Sbjct: 131 VRNGYCSNGDECLYLHIDPLS 151
>sp|O55000|PP1RA_RAT Serine/threonine-protein phosphatase 1 regulatory subunit 10
OS=Rattus norvegicus GN=Ppp1r10 PE=1 SV=1
Length = 872
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 394 PLCDYFMKTGNCKYRSACKFHHP 416
P+C +FM GNC+Y + C F+HP
Sbjct: 842 PVCRHFMMKGNCRYENNCAFYHP 864
>sp|Q80W00|PP1RA_MOUSE Serine/threonine-protein phosphatase 1 regulatory subunit 10 OS=Mus
musculus GN=Ppp1r10 PE=1 SV=1
Length = 888
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 394 PLCDYFMKTGNCKYRSACKFHHP 416
P+C +FM GNC+Y + C F+HP
Sbjct: 858 PVCRHFMMKGNCRYENNCAFYHP 880
>sp|Q767K9|PP1RA_PIG Serine/threonine-protein phosphatase 1 regulatory subunit 10 OS=Sus
scrofa GN=PPP1R10 PE=2 SV=1
Length = 925
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 394 PLCDYFMKTGNCKYRSACKFHHP 416
P+C +FM GNC+Y + C F+HP
Sbjct: 895 PVCRHFMMKGNCRYENNCAFYHP 917
>sp|Q6GLT5|MKRN1_XENLA Probable E3 ubiquitin-protein ligase makorin-1 OS=Xenopus laevis
GN=mkrn1 PE=2 SV=1
Length = 408
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 81/214 (37%), Gaps = 64/214 (29%)
Query: 107 VGQHLGQIQCKFYQSTGGCKHGEACRFKHSIEKSEVSKSVLNAFNLPIKLESKGEGLMEK 166
VG + C+++ G CK G CR+ H + S +
Sbjct: 31 VGVWTRHVTCRYFIH-GVCKEGINCRYSHDLATSRSA----------------------- 66
Query: 167 TVQIQCKFYQRTEGCKHGEACRFSHSTEKSENPLPFSGANGMKESKGGSLVEMTGLIGCK 226
+ C+++QR C +G+ CR+ H+ E+P +G S+ SL E +G I K
Sbjct: 67 ---MICRYFQRG-CCAYGDRCRYEHNKPLQEDP---TGDTCTAPSE--SLPEPSGNINSK 117
Query: 227 YHLSA------GGCK---YGNSCKFS----HSKEKPQTYIK--------KSEKASPELNF 265
A GG + + N+ +F +S P+ Y + + E A PEL
Sbjct: 118 AAELAASELASGGPRAQDWVNAVEFVPGQLYSGRAPEAYTQGTVKPDEGREEPADPELKK 177
Query: 266 LGLPIRVHEIECPFYMRNGSCAYGVDCRFNHPDP 299
P Y G C YG +C + H DP
Sbjct: 178 QLCP----------YAAMGECRYGENCVYLHGDP 201
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 29/101 (28%)
Query: 220 TGLIGCKYHLSAGGCKYGNSCKFSHSKEKPQTYIKKSEKASPELNFLGLPIRVHEIECPF 279
T + C+Y + G CK G +C++SH L + C +
Sbjct: 35 TRHVTCRYFIH-GVCKEGINCRYSHD----------------------LATSRSAMICRY 71
Query: 280 YMRNGSCAYGVDCRFNH-----PDPVADEGSDPFNEASDPA 315
+ R G CAYG CR+ H DP D + P +P+
Sbjct: 72 FQR-GCCAYGDRCRYEHNKPLQEDPTGDTCTAPSESLPEPS 111
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 183,427,809
Number of Sequences: 539616
Number of extensions: 8303372
Number of successful extensions: 20566
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 127
Number of HSP's that attempted gapping in prelim test: 18604
Number of HSP's gapped (non-prelim): 1428
length of query: 428
length of database: 191,569,459
effective HSP length: 120
effective length of query: 308
effective length of database: 126,815,539
effective search space: 39059186012
effective search space used: 39059186012
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)