Query 014216
Match_columns 428
No_of_seqs 224 out of 3433
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 07:34:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014216.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014216hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3us3_A Calsequestrin-1; calciu 100.0 2.5E-43 8.5E-48 332.7 35.7 322 26-389 9-350 (367)
2 1sji_A Calsequestrin 2, calseq 100.0 4.8E-41 1.7E-45 315.9 35.2 320 27-390 8-349 (350)
3 2r2j_A Thioredoxin domain-cont 100.0 9.3E-40 3.2E-44 310.5 30.9 329 30-402 5-345 (382)
4 3f8u_A Protein disulfide-isome 100.0 8.3E-38 2.8E-42 307.0 36.7 323 31-393 2-340 (481)
5 3apo_A DNAJ homolog subfamily 100.0 7.1E-38 2.4E-42 324.8 35.5 319 30-388 440-768 (780)
6 2b5e_A Protein disulfide-isome 100.0 6.5E-36 2.2E-40 295.0 33.0 315 24-391 8-344 (504)
7 3apo_A DNAJ homolog subfamily 100.0 2E-34 6.8E-39 299.0 34.5 343 25-386 111-655 (780)
8 3idv_A Protein disulfide-isome 100.0 1E-34 3.4E-39 258.9 24.7 219 28-267 13-237 (241)
9 3uem_A Protein disulfide-isome 100.0 1.2E-29 4.1E-34 239.8 25.9 226 30-265 117-355 (361)
10 1a8l_A Protein disulfide oxido 100.0 5.4E-30 1.8E-34 225.9 19.0 196 47-266 21-225 (226)
11 2ywm_A Glutaredoxin-like prote 100.0 1.9E-29 6.6E-34 222.8 20.5 196 46-267 18-220 (229)
12 3uem_A Protein disulfide-isome 100.0 5E-27 1.7E-31 221.7 34.5 317 29-386 16-356 (361)
13 3ed3_A Protein disulfide-isome 100.0 3.3E-28 1.1E-32 222.1 22.0 230 25-285 12-282 (298)
14 2hls_A Protein disulfide oxido 99.9 4.8E-26 1.6E-30 201.7 20.2 192 47-267 24-226 (243)
15 3ed3_A Protein disulfide-isome 99.9 6.7E-24 2.3E-28 193.6 24.4 217 157-388 14-268 (298)
16 3q6o_A Sulfhydryl oxidase 1; p 99.9 5.5E-24 1.9E-28 189.4 20.4 213 22-257 4-229 (244)
17 3idv_A Protein disulfide-isome 99.9 5.2E-23 1.8E-27 182.9 24.5 218 158-387 13-237 (241)
18 3us3_A Calsequestrin-1; calciu 99.9 5.2E-23 1.8E-27 193.8 25.1 207 158-386 11-226 (367)
19 1sji_A Calsequestrin 2, calseq 99.9 2.5E-23 8.5E-28 195.3 22.7 207 158-387 9-225 (350)
20 3ec3_A Protein disulfide-isome 99.9 4.5E-22 1.6E-26 177.2 24.2 220 158-393 4-234 (250)
21 2h8l_A Protein disulfide-isome 99.9 4.8E-22 1.6E-26 177.5 23.8 219 158-392 4-235 (252)
22 4f9z_D Endoplasmic reticulum r 99.9 2.9E-22 1E-26 175.9 21.8 211 160-389 9-227 (227)
23 3f8u_A Protein disulfide-isome 99.9 3.5E-22 1.2E-26 195.8 23.7 207 161-388 2-218 (481)
24 2r2j_A Thioredoxin domain-cont 99.9 4E-22 1.4E-26 189.1 20.1 205 159-386 4-217 (382)
25 3t58_A Sulfhydryl oxidase 1; o 99.9 2.1E-21 7.2E-26 189.2 23.0 203 21-244 3-217 (519)
26 2b5e_A Protein disulfide-isome 99.9 1.1E-20 3.6E-25 186.3 19.1 202 156-386 10-219 (504)
27 3h79_A Thioredoxin-like protei 99.8 1.2E-20 4.1E-25 150.0 13.7 112 23-134 8-126 (127)
28 3q6o_A Sulfhydryl oxidase 1; p 99.8 5.7E-19 1.9E-23 156.9 24.8 212 158-385 10-238 (244)
29 4f9z_D Endoplasmic reticulum r 99.8 4.4E-19 1.5E-23 155.6 22.0 206 30-267 9-225 (227)
30 3zzx_A Thioredoxin; oxidoreduc 99.8 2.8E-20 9.4E-25 141.8 11.2 100 33-134 3-104 (105)
31 3gnj_A Thioredoxin domain prot 99.8 3.8E-20 1.3E-24 143.4 12.1 107 29-135 3-109 (111)
32 1a8l_A Protein disulfide oxido 99.8 4.4E-19 1.5E-23 155.9 19.8 196 178-386 22-225 (226)
33 2qsi_A Putative hydrogenase ex 99.8 3.2E-20 1.1E-24 145.6 10.7 107 30-136 15-123 (137)
34 2dml_A Protein disulfide-isome 99.8 1.1E-19 3.7E-24 145.1 13.8 114 23-136 10-124 (130)
35 2ywm_A Glutaredoxin-like prote 99.8 8.4E-19 2.9E-23 154.4 20.8 196 176-388 18-221 (229)
36 1x5d_A Protein disulfide-isome 99.8 1.1E-19 3.8E-24 145.7 12.4 110 28-137 5-118 (133)
37 2trx_A Thioredoxin; electron t 99.8 1.2E-19 3.9E-24 139.9 11.7 106 30-135 2-107 (108)
38 3hz4_A Thioredoxin; NYSGXRC, P 99.8 1.6E-19 5.5E-24 146.0 12.8 114 29-142 5-118 (140)
39 2av4_A Thioredoxin-like protei 99.8 7.3E-20 2.5E-24 145.5 10.2 108 32-139 23-142 (160)
40 2qgv_A Hydrogenase-1 operon pr 99.8 5.5E-20 1.9E-24 144.8 7.6 104 31-135 18-124 (140)
41 3tco_A Thioredoxin (TRXA-1); d 99.8 2.2E-19 7.4E-24 138.5 10.7 106 29-135 3-108 (109)
42 1w4v_A Thioredoxin, mitochondr 99.8 2.4E-19 8.3E-24 140.7 10.7 108 28-135 11-118 (119)
43 1t00_A Thioredoxin, TRX; redox 99.8 3.7E-19 1.3E-23 138.0 11.6 106 30-135 5-110 (112)
44 3die_A Thioredoxin, TRX; elect 99.8 2.3E-19 7.8E-24 137.7 10.1 103 30-134 3-105 (106)
45 2i4a_A Thioredoxin; acidophIle 99.8 2.7E-19 9.1E-24 137.6 10.5 105 30-134 2-106 (107)
46 2o8v_B Thioredoxin 1; disulfid 99.8 3E-19 1E-23 141.9 10.7 106 30-135 22-127 (128)
47 3t58_A Sulfhydryl oxidase 1; o 99.8 2.3E-17 8E-22 160.7 26.2 212 158-384 10-237 (519)
48 1dby_A Chloroplast thioredoxin 99.8 3.9E-19 1.3E-23 136.7 10.8 104 31-134 2-105 (107)
49 1thx_A Thioredoxin, thioredoxi 99.8 6E-19 2.1E-23 137.4 11.9 106 30-135 7-112 (115)
50 3aps_A DNAJ homolog subfamily 99.8 4.7E-19 1.6E-23 139.7 10.8 107 30-136 3-113 (122)
51 3qfa_C Thioredoxin; protein-pr 99.8 3E-19 1E-23 139.4 8.9 105 28-134 10-115 (116)
52 2voc_A Thioredoxin; electron t 99.8 4.3E-19 1.5E-23 137.6 9.8 103 31-135 2-104 (112)
53 1nsw_A Thioredoxin, TRX; therm 99.8 3.8E-19 1.3E-23 136.2 9.3 102 32-134 2-103 (105)
54 1fb6_A Thioredoxin M; electron 99.8 7.6E-19 2.6E-23 134.5 10.4 103 32-134 2-104 (105)
55 2dj1_A Protein disulfide-isome 99.8 9.4E-19 3.2E-23 141.5 11.1 105 29-135 16-123 (140)
56 3uvt_A Thioredoxin domain-cont 99.8 1.2E-18 4.3E-23 134.7 11.2 104 29-134 4-110 (111)
57 3p2a_A Thioredoxin 2, putative 99.8 2.1E-18 7.3E-23 140.8 13.1 107 29-136 37-143 (148)
58 3hxs_A Thioredoxin, TRXP; elec 99.8 1.1E-18 3.8E-23 141.3 11.1 108 28-135 20-138 (141)
59 2ppt_A Thioredoxin-2; thiredox 99.8 1.1E-18 3.7E-23 143.4 11.1 106 29-135 46-151 (155)
60 3h79_A Thioredoxin-like protei 99.8 5.7E-18 2E-22 134.4 14.5 108 158-265 13-126 (127)
61 2yzu_A Thioredoxin; redox prot 99.8 9.8E-19 3.4E-23 134.8 9.6 104 31-135 2-105 (109)
62 2l5l_A Thioredoxin; structural 99.8 3.3E-18 1.1E-22 137.5 12.9 107 28-135 7-125 (136)
63 2e0q_A Thioredoxin; electron t 99.8 2.1E-18 7.3E-23 131.6 10.8 102 32-135 1-102 (104)
64 3apq_A DNAJ homolog subfamily 99.8 2.6E-18 9E-23 148.9 12.2 111 25-136 92-202 (210)
65 3f3q_A Thioredoxin-1; His TAG, 99.8 2.4E-18 8.4E-23 132.6 10.4 104 28-134 5-108 (109)
66 2i1u_A Thioredoxin, TRX, MPT46 99.8 2.6E-18 8.7E-23 135.2 10.7 107 28-134 10-116 (121)
67 3ga4_A Dolichyl-diphosphooligo 99.8 5.1E-18 1.7E-22 140.1 12.7 107 29-135 17-152 (178)
68 2pu9_C TRX-F, thioredoxin F-ty 99.8 8E-18 2.7E-22 130.2 12.5 105 29-135 4-110 (111)
69 1mek_A Protein disulfide isome 99.8 9E-19 3.1E-23 137.5 7.2 108 27-135 4-116 (120)
70 1oaz_A Thioredoxin 1; immune s 99.8 4.8E-19 1.6E-23 139.6 5.2 105 30-134 3-121 (123)
71 4euy_A Uncharacterized protein 99.8 6E-19 2.1E-23 135.1 5.6 97 36-134 7-103 (105)
72 2dj3_A Protein disulfide-isome 99.7 2.4E-18 8.3E-23 137.8 8.9 108 28-135 5-117 (133)
73 1ep7_A Thioredoxin CH1, H-type 99.7 5.8E-18 2E-22 131.2 10.8 104 31-135 3-110 (112)
74 1r26_A Thioredoxin; redox-acti 99.7 6.7E-18 2.3E-22 133.3 11.1 103 31-136 20-123 (125)
75 1gh2_A Thioredoxin-like protei 99.7 7.8E-18 2.7E-22 129.3 11.2 102 32-135 3-106 (107)
76 1x5d_A Protein disulfide-isome 99.7 1.8E-17 6.2E-22 132.7 13.5 123 158-281 5-131 (133)
77 1x5e_A Thioredoxin domain cont 99.7 6.1E-18 2.1E-22 134.1 10.6 104 28-135 5-109 (126)
78 2vlu_A Thioredoxin, thioredoxi 99.7 8.5E-18 2.9E-22 132.4 11.3 104 30-135 13-119 (122)
79 3dxb_A Thioredoxin N-terminall 99.7 4.8E-18 1.6E-22 148.5 10.7 109 27-135 9-117 (222)
80 1xwb_A Thioredoxin; dimerizati 99.7 7E-18 2.4E-22 129.3 10.3 102 32-134 2-105 (106)
81 3d6i_A Monothiol glutaredoxin- 99.7 1.1E-17 3.6E-22 129.7 11.3 104 32-136 2-109 (112)
82 3gix_A Thioredoxin-like protei 99.7 7.8E-18 2.7E-22 137.2 10.8 104 35-138 9-123 (149)
83 2djj_A PDI, protein disulfide- 99.7 4.8E-18 1.6E-22 133.7 9.3 105 28-135 5-116 (121)
84 1syr_A Thioredoxin; SGPP, stru 99.7 4.6E-18 1.6E-22 131.8 8.8 104 28-134 7-110 (112)
85 3ul3_B Thioredoxin, thioredoxi 99.7 3.5E-18 1.2E-22 135.9 8.0 91 43-133 37-127 (128)
86 3m9j_A Thioredoxin; oxidoreduc 99.7 1.1E-17 3.8E-22 127.9 10.4 98 34-134 4-104 (105)
87 2wz9_A Glutaredoxin-3; protein 99.7 1.2E-17 4.1E-22 137.1 11.0 105 28-135 10-117 (153)
88 2oe3_A Thioredoxin-3; electron 99.7 6E-18 2.1E-22 131.4 8.6 101 30-132 12-112 (114)
89 2dml_A Protein disulfide-isome 99.7 8.3E-17 2.8E-21 128.2 15.4 113 157-269 14-126 (130)
90 1v98_A Thioredoxin; oxidoreduc 99.7 1.1E-17 3.6E-22 135.3 10.1 105 30-135 33-137 (140)
91 2dj0_A Thioredoxin-related tra 99.7 3.6E-18 1.2E-22 137.5 7.0 107 28-134 5-119 (137)
92 1faa_A Thioredoxin F; electron 99.7 3.3E-17 1.1E-21 129.4 11.5 105 28-134 16-122 (124)
93 1xfl_A Thioredoxin H1; AT3G510 99.7 3.5E-17 1.2E-21 129.1 11.3 105 28-134 14-122 (124)
94 2xc2_A Thioredoxinn; oxidoredu 99.7 1.9E-17 6.4E-22 129.4 9.5 101 31-134 14-116 (117)
95 3qou_A Protein YBBN; thioredox 99.7 1.9E-17 6.4E-22 150.9 10.9 106 29-135 6-113 (287)
96 2vim_A Thioredoxin, TRX; thior 99.7 3.2E-17 1.1E-21 125.1 10.4 100 33-134 2-103 (104)
97 3evi_A Phosducin-like protein 99.7 2.1E-17 7.3E-22 128.1 9.3 100 30-133 3-111 (118)
98 1qgv_A Spliceosomal protein U5 99.7 3.3E-17 1.1E-21 132.4 10.1 102 36-137 10-122 (142)
99 2es7_A Q8ZP25_salty, putative 99.7 1.1E-17 3.8E-22 134.6 7.2 104 31-136 18-125 (142)
100 3gnj_A Thioredoxin domain prot 99.7 1.1E-16 3.9E-21 123.6 12.6 108 159-267 3-110 (111)
101 1ti3_A Thioredoxin H, PTTRXH1; 99.7 7.7E-17 2.6E-21 125.0 11.5 105 29-135 3-111 (113)
102 1zma_A Bacterocin transport ac 99.7 1.9E-17 6.6E-22 129.5 8.1 102 30-132 12-117 (118)
103 3zzx_A Thioredoxin; oxidoreduc 99.7 1.2E-16 4.1E-21 121.6 12.1 101 162-265 2-104 (105)
104 2j23_A Thioredoxin; immune pro 99.7 3E-17 1E-21 129.0 8.7 106 28-135 13-120 (121)
105 2l57_A Uncharacterized protein 99.7 4.6E-17 1.6E-21 129.0 9.4 104 32-135 6-116 (126)
106 2l6c_A Thioredoxin; oxidoreduc 99.7 3.7E-17 1.3E-21 126.1 8.4 100 32-134 5-104 (110)
107 2f51_A Thioredoxin; electron t 99.7 6.5E-17 2.2E-21 126.4 9.9 102 31-134 4-111 (118)
108 2yj7_A LPBCA thioredoxin; oxid 99.5 1.3E-18 4.3E-23 133.4 0.0 104 31-134 2-105 (106)
109 2hls_A Protein disulfide oxido 99.7 3.5E-15 1.2E-19 131.8 22.1 202 168-388 15-227 (243)
110 3emx_A Thioredoxin; structural 99.7 1.8E-17 6.2E-22 132.9 6.7 102 29-135 15-125 (135)
111 2trx_A Thioredoxin; electron t 99.7 2.6E-16 8.8E-21 120.9 12.6 106 160-266 2-107 (108)
112 1w4v_A Thioredoxin, mitochondr 99.7 1.9E-16 6.6E-21 124.0 11.5 111 155-266 8-118 (119)
113 2vm1_A Thioredoxin, thioredoxi 99.7 1.7E-16 6E-21 124.0 10.7 105 29-135 5-113 (118)
114 3d22_A TRXH4, thioredoxin H-ty 99.7 2.2E-16 7.4E-21 127.4 11.5 106 29-136 23-132 (139)
115 3ga4_A Dolichyl-diphosphooligo 99.7 5.8E-16 2E-20 127.8 14.0 110 158-267 16-153 (178)
116 2i4a_A Thioredoxin; acidophIle 99.7 3.8E-16 1.3E-20 119.7 11.8 105 160-265 2-106 (107)
117 2c0g_A ERP29 homolog, windbeut 99.7 4.1E-16 1.4E-20 136.6 13.5 145 28-208 14-174 (248)
118 3hxs_A Thioredoxin, TRXP; elec 99.7 3.1E-16 1.1E-20 126.7 11.9 109 157-266 19-138 (141)
119 2qsi_A Putative hydrogenase ex 99.7 2.7E-16 9.4E-21 123.2 10.7 108 159-267 14-123 (137)
120 2voc_A Thioredoxin; electron t 99.7 3E-16 1E-20 121.4 10.9 104 161-267 2-105 (112)
121 1thx_A Thioredoxin, thioredoxi 99.7 5.6E-16 1.9E-20 120.4 12.2 108 159-267 6-113 (115)
122 3die_A Thioredoxin, TRX; elect 99.7 4.2E-16 1.5E-20 119.2 11.2 103 160-265 3-105 (106)
123 2o8v_B Thioredoxin 1; disulfid 99.7 4.8E-16 1.7E-20 123.3 11.7 106 160-266 22-127 (128)
124 2dbc_A PDCL2, unnamed protein 99.7 4E-16 1.4E-20 124.9 11.2 103 28-134 8-119 (135)
125 2l5l_A Thioredoxin; structural 99.7 1.4E-15 4.9E-20 122.0 14.3 110 159-269 8-128 (136)
126 3aps_A DNAJ homolog subfamily 99.7 4.9E-16 1.7E-20 122.3 11.3 108 159-267 2-113 (122)
127 3hz4_A Thioredoxin; NYSGXRC, P 99.7 4.8E-16 1.6E-20 125.4 11.4 110 158-268 4-113 (140)
128 3qfa_C Thioredoxin; protein-pr 99.7 3.9E-16 1.3E-20 121.6 10.4 106 157-265 9-115 (116)
129 3tco_A Thioredoxin (TRXA-1); d 99.7 8.3E-16 2.8E-20 118.2 12.0 106 159-266 3-108 (109)
130 2dj1_A Protein disulfide-isome 99.7 9.1E-16 3.1E-20 123.8 12.7 110 158-270 15-127 (140)
131 2av4_A Thioredoxin-like protei 99.7 8.3E-16 2.8E-20 122.2 11.6 106 162-267 23-139 (160)
132 1dby_A Chloroplast thioredoxin 99.7 1E-15 3.5E-20 117.3 11.9 105 161-266 2-106 (107)
133 1t00_A Thioredoxin, TRX; redox 99.7 1.2E-15 4.2E-20 117.9 12.1 106 160-266 5-110 (112)
134 3cxg_A Putative thioredoxin; m 99.6 1.5E-16 5.1E-21 127.1 7.0 103 29-135 19-128 (133)
135 3uvt_A Thioredoxin domain-cont 99.6 1.6E-15 5.4E-20 117.0 11.6 104 159-265 4-110 (111)
136 2djj_A PDI, protein disulfide- 99.6 1.3E-15 4.6E-20 119.5 11.3 106 158-266 5-116 (121)
137 1nsw_A Thioredoxin, TRX; therm 99.6 1E-15 3.6E-20 116.8 10.3 102 162-265 2-103 (105)
138 2qgv_A Hydrogenase-1 operon pr 99.6 2.8E-16 9.6E-21 123.6 6.9 105 161-267 18-125 (140)
139 3qcp_A QSOX from trypanosoma b 99.6 2E-16 7E-21 149.9 7.1 107 21-127 14-131 (470)
140 1fb6_A Thioredoxin M; electron 99.6 2E-15 6.8E-20 115.2 11.3 103 162-265 2-104 (105)
141 2dj3_A Protein disulfide-isome 99.6 9.9E-16 3.4E-20 122.5 9.9 110 158-267 5-118 (133)
142 2ppt_A Thioredoxin-2; thiredox 99.6 2E-15 6.8E-20 123.8 11.9 107 159-267 46-152 (155)
143 3p2a_A Thioredoxin 2, putative 99.6 3.2E-15 1.1E-19 121.8 12.9 108 159-268 37-144 (148)
144 2e0q_A Thioredoxin; electron t 99.6 2.7E-15 9.4E-20 114.1 11.7 102 162-266 1-102 (104)
145 3apq_A DNAJ homolog subfamily 99.6 5.5E-15 1.9E-19 127.9 14.4 108 158-267 95-202 (210)
146 2yzu_A Thioredoxin; redox prot 99.6 2.7E-15 9.1E-20 115.3 11.0 104 161-266 2-105 (109)
147 2kuc_A Putative disulphide-iso 99.6 8.2E-16 2.8E-20 122.4 8.2 103 33-135 9-120 (130)
148 1wmj_A Thioredoxin H-type; str 99.6 1.8E-16 6.3E-21 126.2 4.3 109 25-135 9-121 (130)
149 2h8l_A Protein disulfide-isome 99.6 9.1E-14 3.1E-18 123.7 22.1 206 31-270 7-233 (252)
150 2i1u_A Thioredoxin, TRX, MPT46 99.6 3.9E-15 1.3E-19 116.8 11.4 107 158-265 10-116 (121)
151 1x5e_A Thioredoxin domain cont 99.6 4.6E-15 1.6E-19 117.3 11.7 105 158-267 5-110 (126)
152 3dxb_A Thioredoxin N-terminall 99.6 5.4E-15 1.9E-19 129.1 12.9 111 157-268 9-119 (222)
153 3fk8_A Disulphide isomerase; A 99.6 1.4E-15 4.8E-20 121.6 8.2 90 45-134 26-131 (133)
154 2qc7_A ERP31, ERP28, endoplasm 99.6 6.5E-15 2.2E-19 128.6 12.9 100 30-134 5-117 (240)
155 2fwh_A Thiol:disulfide interch 99.6 4.6E-15 1.6E-19 118.6 10.9 102 32-134 13-126 (134)
156 1fo5_A Thioredoxin; disulfide 99.6 1.1E-15 3.9E-20 111.7 6.8 82 49-134 3-84 (85)
157 1r26_A Thioredoxin; redox-acti 99.6 1.2E-14 4E-19 114.6 12.8 104 160-267 19-123 (125)
158 1oaz_A Thioredoxin 1; immune s 99.6 1E-15 3.4E-20 120.5 6.6 105 160-265 3-121 (123)
159 1xwb_A Thioredoxin; dimerizati 99.6 8.9E-15 3.1E-19 111.7 11.6 102 162-265 2-105 (106)
160 1gh2_A Thioredoxin-like protei 99.6 1.5E-14 5.2E-19 110.8 12.5 102 162-266 3-106 (107)
161 2vlu_A Thioredoxin, thioredoxi 99.6 1E-14 3.6E-19 114.5 11.8 106 158-266 11-119 (122)
162 2pu9_C TRX-F, thioredoxin F-ty 99.6 2.1E-14 7.3E-19 110.7 13.3 106 158-266 3-110 (111)
163 1nho_A Probable thioredoxin; b 99.6 1.5E-15 5.1E-20 111.1 6.3 81 50-134 3-83 (85)
164 3f3q_A Thioredoxin-1; His TAG, 99.6 1.8E-14 6E-19 110.8 12.4 101 161-265 8-108 (109)
165 2trc_P Phosducin, MEKA, PP33; 99.6 1.4E-15 4.6E-20 131.6 6.5 104 28-133 97-210 (217)
166 1wou_A Thioredoxin -related pr 99.6 3.6E-15 1.2E-19 117.4 8.4 100 32-132 7-121 (123)
167 3m9j_A Thioredoxin; oxidoreduc 99.6 1.4E-14 4.8E-19 110.5 11.4 100 163-265 3-104 (105)
168 1ep7_A Thioredoxin CH1, H-type 99.6 1.6E-14 5.6E-19 111.5 11.9 104 161-266 3-110 (112)
169 1mek_A Protein disulfide isome 99.6 3.9E-15 1.3E-19 116.5 8.3 107 159-266 6-116 (120)
170 2djk_A PDI, protein disulfide- 99.6 6.8E-15 2.3E-19 117.4 9.8 101 32-135 8-114 (133)
171 4euy_A Uncharacterized protein 99.6 2.3E-15 8E-20 114.9 6.6 96 167-265 8-103 (105)
172 1v98_A Thioredoxin; oxidoreduc 99.6 1E-14 3.5E-19 117.6 10.5 105 160-266 33-137 (140)
173 2l57_A Uncharacterized protein 99.6 9.3E-15 3.2E-19 115.5 9.9 95 176-270 24-120 (126)
174 2oe3_A Thioredoxin-3; electron 99.6 7.9E-15 2.7E-19 113.7 9.2 104 158-264 10-113 (114)
175 1syr_A Thioredoxin; SGPP, stru 99.6 1.3E-14 4.4E-19 112.2 10.4 104 158-265 7-110 (112)
176 3f9u_A Putative exported cytoc 99.6 6E-15 2.1E-19 123.5 9.0 106 32-137 28-167 (172)
177 3d6i_A Monothiol glutaredoxin- 99.6 2.3E-14 7.8E-19 110.7 11.4 104 162-267 2-109 (112)
178 1a0r_P Phosducin, MEKA, PP33; 99.6 4.2E-15 1.4E-19 130.0 7.6 104 28-133 110-223 (245)
179 1xfl_A Thioredoxin H1; AT3G510 99.6 4.3E-14 1.5E-18 111.3 12.7 106 158-266 14-123 (124)
180 2vim_A Thioredoxin, TRX; thior 99.6 3.3E-14 1.1E-18 108.2 11.6 100 163-265 2-103 (104)
181 2xc2_A Thioredoxinn; oxidoredu 99.6 2E-14 6.7E-19 112.1 10.3 101 161-265 14-116 (117)
182 3ul3_B Thioredoxin, thioredoxi 99.6 5.5E-15 1.9E-19 117.2 7.1 91 173-264 37-127 (128)
183 2dj0_A Thioredoxin-related tra 99.5 2E-15 6.8E-20 121.3 4.4 105 158-263 5-117 (137)
184 3qou_A Protein YBBN; thioredox 99.5 2.2E-14 7.6E-19 130.5 11.3 108 158-266 5-113 (287)
185 3dml_A Putative uncharacterize 99.5 4.1E-15 1.4E-19 113.4 5.2 90 47-136 17-110 (116)
186 3gix_A Thioredoxin-like protei 99.5 3.6E-14 1.2E-18 115.4 10.9 101 166-267 10-121 (149)
187 1faa_A Thioredoxin F; electron 99.5 9.6E-14 3.3E-18 109.3 12.5 105 158-265 16-122 (124)
188 2wz9_A Glutaredoxin-3; protein 99.5 7.8E-14 2.7E-18 114.2 12.2 109 158-269 10-120 (153)
189 3evi_A Phosducin-like protein 99.5 4.6E-14 1.6E-18 109.2 10.0 101 160-265 3-112 (118)
190 3ec3_A Protein disulfide-isome 99.5 2.4E-12 8.1E-17 114.3 22.5 205 31-270 7-231 (250)
191 1qgv_A Spliceosomal protein U5 99.5 6.2E-14 2.1E-18 113.0 11.0 103 166-268 10-122 (142)
192 2es7_A Q8ZP25_salty, putative 99.5 2.1E-14 7.3E-19 115.3 8.2 104 161-267 18-125 (142)
193 2lst_A Thioredoxin; structural 99.3 9.7E-16 3.3E-20 122.0 0.0 94 43-136 14-116 (130)
194 3emx_A Thioredoxin; structural 99.5 1.6E-14 5.5E-19 115.6 7.0 104 159-268 15-127 (135)
195 2f51_A Thioredoxin; electron t 99.5 6.2E-14 2.1E-18 109.3 10.1 105 160-266 3-112 (118)
196 3d22_A TRXH4, thioredoxin H-ty 99.5 1.5E-13 5E-18 110.6 12.6 107 158-267 22-132 (139)
197 2c0g_A ERP29 homolog, windbeut 99.5 1.5E-13 5.2E-18 120.3 13.4 104 158-267 14-132 (248)
198 3iv4_A Putative oxidoreductase 99.5 3.4E-14 1.2E-18 106.6 7.7 97 31-130 7-110 (112)
199 1ti3_A Thioredoxin H, PTTRXH1; 99.5 1.3E-13 4.4E-18 106.6 11.2 105 159-266 3-111 (113)
200 2l6c_A Thioredoxin; oxidoreduc 99.5 4.4E-14 1.5E-18 108.7 8.2 100 163-266 6-105 (110)
201 2yj7_A LPBCA thioredoxin; oxid 99.2 1.6E-15 5.6E-20 115.8 0.0 103 162-265 3-105 (106)
202 2j23_A Thioredoxin; immune pro 99.5 6.3E-14 2.2E-18 109.8 9.1 106 158-266 13-120 (121)
203 2vm1_A Thioredoxin, thioredoxi 99.5 1.8E-13 6.3E-18 106.6 11.5 105 159-266 5-113 (118)
204 2djk_A PDI, protein disulfide- 99.5 3.4E-13 1.2E-17 107.4 13.1 110 159-270 5-118 (133)
205 2dbc_A PDCL2, unnamed protein 99.5 4.9E-13 1.7E-17 106.8 13.0 103 158-265 8-119 (135)
206 1sen_A Thioredoxin-like protei 99.5 1.7E-14 5.9E-19 119.4 4.6 99 39-138 38-150 (164)
207 2ju5_A Thioredoxin disulfide i 99.5 7.9E-14 2.7E-18 114.2 8.1 89 46-135 45-151 (154)
208 1zma_A Bacterocin transport ac 99.5 7E-14 2.4E-18 109.1 7.4 103 159-263 11-117 (118)
209 2qc7_A ERP31, ERP28, endoplasm 99.5 4.8E-13 1.6E-17 116.7 13.3 103 159-266 4-118 (240)
210 2b5x_A YKUV protein, TRXY; thi 99.5 2.9E-13 9.9E-18 109.9 11.1 102 33-135 15-144 (148)
211 3kp8_A Vkorc1/thioredoxin doma 99.5 1.3E-14 4.3E-19 110.5 2.3 75 47-132 11-91 (106)
212 3cxg_A Putative thioredoxin; m 99.5 5.3E-14 1.8E-18 112.2 5.8 107 157-266 17-128 (133)
213 1lu4_A Soluble secreted antige 99.5 2E-13 6.8E-18 109.2 9.1 87 47-135 23-135 (136)
214 2kuc_A Putative disulphide-iso 99.4 2.7E-13 9.1E-18 107.7 9.3 107 162-268 8-122 (130)
215 3or5_A Thiol:disulfide interch 99.4 5.3E-13 1.8E-17 110.6 11.3 105 31-136 18-151 (165)
216 1zzo_A RV1677; thioredoxin fol 99.4 3.7E-13 1.3E-17 107.6 9.0 101 32-135 10-134 (136)
217 1ilo_A Conserved hypothetical 99.4 2.6E-13 9E-18 96.9 7.3 74 51-131 2-76 (77)
218 2fwh_A Thiol:disulfide interch 99.4 1.1E-12 3.8E-17 104.6 11.6 107 158-265 9-126 (134)
219 1fo5_A Thioredoxin; disulfide 99.4 4.2E-13 1.5E-17 97.8 8.3 82 179-265 3-84 (85)
220 2trc_P Phosducin, MEKA, PP33; 99.4 6.4E-13 2.2E-17 114.7 9.9 104 159-265 98-211 (217)
221 3fk8_A Disulphide isomerase; A 99.4 8.2E-13 2.8E-17 105.3 9.5 90 176-265 27-131 (133)
222 1nho_A Probable thioredoxin; b 99.4 5.3E-13 1.8E-17 97.3 7.5 82 180-266 3-84 (85)
223 3qcp_A QSOX from trypanosoma b 99.4 2.4E-13 8.3E-18 129.0 6.6 98 158-255 21-128 (470)
224 1wou_A Thioredoxin -related pr 99.4 1.2E-12 4.3E-17 102.7 9.6 101 161-263 6-121 (123)
225 3erw_A Sporulation thiol-disul 99.4 1.1E-12 3.8E-17 106.0 9.4 85 47-131 33-144 (145)
226 3ira_A Conserved protein; meth 99.4 9.4E-13 3.2E-17 108.6 8.6 98 37-135 29-143 (173)
227 1a0r_P Phosducin, MEKA, PP33; 99.4 2.1E-12 7.3E-17 112.9 11.2 104 159-265 111-224 (245)
228 3ph9_A Anterior gradient prote 99.4 1.8E-12 6.2E-17 104.7 10.0 90 43-134 39-140 (151)
229 1wmj_A Thioredoxin H-type; str 99.4 2.5E-13 8.5E-18 107.8 4.8 107 158-267 12-122 (130)
230 1hyu_A AHPF, alkyl hydroperoxi 99.4 3E-11 1E-15 118.9 20.3 180 48-265 18-198 (521)
231 3hcz_A Possible thiol-disulfid 99.4 1.7E-12 5.7E-17 105.4 8.9 88 47-134 30-144 (148)
232 3raz_A Thioredoxin-related pro 99.4 2.9E-12 1E-16 104.5 10.3 89 47-135 23-139 (151)
233 2f9s_A Thiol-disulfide oxidore 99.4 1.5E-12 5.3E-17 106.1 8.6 89 47-135 25-137 (151)
234 2lja_A Putative thiol-disulfid 99.4 3.4E-12 1.2E-16 104.1 10.4 89 47-135 29-142 (152)
235 3iv4_A Putative oxidoreductase 99.4 2.2E-12 7.4E-17 96.8 8.2 98 161-261 7-110 (112)
236 1z6n_A Hypothetical protein PA 99.4 1E-12 3.5E-17 108.3 7.1 96 34-133 40-140 (167)
237 2fgx_A Putative thioredoxin; N 99.3 1.2E-12 3.9E-17 98.5 6.5 77 50-131 30-106 (107)
238 2l5o_A Putative thioredoxin; s 99.3 6.1E-12 2.1E-16 102.8 10.9 90 47-136 27-141 (153)
239 4evm_A Thioredoxin family prot 99.3 3.6E-12 1.2E-16 101.8 8.8 87 47-133 21-136 (138)
240 3lor_A Thiol-disulfide isomera 99.3 8.5E-12 2.9E-16 102.7 10.9 100 35-135 18-154 (160)
241 2h30_A Thioredoxin, peptide me 99.3 6.3E-13 2.1E-17 110.1 4.0 104 31-135 22-155 (164)
242 3bj5_A Protein disulfide-isome 99.3 2E-11 6.9E-16 98.4 12.7 118 270-392 11-132 (147)
243 2b1k_A Thiol:disulfide interch 99.3 4.6E-12 1.6E-16 105.3 8.8 100 36-138 39-162 (168)
244 3eyt_A Uncharacterized protein 99.3 1.1E-11 3.7E-16 101.9 10.6 89 47-135 27-151 (158)
245 1ttz_A Conserved hypothetical 99.3 2.2E-12 7.5E-17 93.7 5.2 73 52-134 3-75 (87)
246 3fkf_A Thiol-disulfide oxidore 99.3 7.1E-12 2.4E-16 101.6 8.8 86 47-135 32-145 (148)
247 3f9u_A Putative exported cytoc 99.3 1.2E-11 4E-16 103.3 10.3 104 164-267 30-166 (172)
248 3gl3_A Putative thiol:disulfid 99.3 1.8E-11 6.3E-16 99.8 10.9 89 47-135 27-141 (152)
249 2lrn_A Thiol:disulfide interch 99.3 1.4E-11 4.8E-16 100.5 10.1 86 47-135 28-140 (152)
250 3ia1_A THIO-disulfide isomeras 99.3 6.3E-12 2.2E-16 102.8 8.0 85 49-135 31-143 (154)
251 1kng_A Thiol:disulfide interch 99.3 7.9E-12 2.7E-16 102.4 8.5 89 47-137 41-153 (156)
252 3lwa_A Secreted thiol-disulfid 99.3 1.9E-11 6.4E-16 103.2 10.2 90 47-136 58-181 (183)
253 1nm3_A Protein HI0572; hybrid, 99.2 1.2E-10 4E-15 102.8 14.7 148 47-238 32-225 (241)
254 3ha9_A Uncharacterized thiored 99.2 3.2E-11 1.1E-15 99.9 9.8 86 47-135 36-163 (165)
255 2lst_A Thioredoxin; structural 98.9 9.7E-13 3.3E-17 104.4 0.0 94 176-269 17-118 (130)
256 2lrt_A Uncharacterized protein 99.2 4.2E-11 1.4E-15 97.7 9.8 81 47-127 34-139 (152)
257 3kcm_A Thioredoxin family prot 99.2 4.7E-11 1.6E-15 97.5 9.8 89 47-135 27-142 (154)
258 2ju5_A Thioredoxin disulfide i 99.2 4.6E-11 1.6E-15 97.6 9.6 90 176-266 45-151 (154)
259 2b5x_A YKUV protein, TRXY; thi 99.2 1.4E-10 4.7E-15 93.9 12.2 104 163-267 15-145 (148)
260 1lu4_A Soluble secreted antige 99.2 9.1E-11 3.1E-15 93.5 10.7 88 177-266 23-135 (136)
261 3fw2_A Thiol-disulfide oxidore 99.2 1.1E-10 3.9E-15 94.8 11.2 87 47-136 32-148 (150)
262 3hdc_A Thioredoxin family prot 99.2 4.7E-11 1.6E-15 98.1 8.9 86 47-132 40-148 (158)
263 3kp8_A Vkorc1/thioredoxin doma 99.2 1.1E-11 3.7E-16 94.1 4.3 73 178-262 12-90 (106)
264 1i5g_A Tryparedoxin II; electr 99.2 7.5E-11 2.6E-15 95.2 9.6 83 32-115 13-123 (144)
265 3kh7_A Thiol:disulfide interch 99.2 7.1E-11 2.4E-15 98.9 9.6 89 47-138 57-169 (176)
266 3dml_A Putative uncharacterize 99.2 3.5E-11 1.2E-15 91.6 6.9 87 177-267 17-110 (116)
267 2ywi_A Hypothetical conserved 99.2 8E-11 2.7E-15 100.4 9.9 101 35-136 33-174 (196)
268 3ewl_A Uncharacterized conserv 99.2 5.4E-11 1.8E-15 95.7 7.9 85 47-134 26-139 (142)
269 1o8x_A Tryparedoxin, TRYX, TXN 99.2 8.1E-11 2.8E-15 95.2 8.9 69 47-115 27-123 (146)
270 1zzo_A RV1677; thioredoxin fol 99.2 1.9E-10 6.5E-15 91.5 10.8 88 177-266 24-134 (136)
271 1sen_A Thioredoxin-like protei 99.2 4.3E-11 1.5E-15 98.8 7.2 93 176-268 44-149 (164)
272 2dlx_A UBX domain-containing p 99.2 1.5E-10 5.2E-15 93.5 10.0 91 45-136 39-136 (153)
273 1ilo_A Conserved hypothetical 99.2 9.1E-11 3.1E-15 83.5 7.6 74 181-262 2-76 (77)
274 2hyx_A Protein DIPZ; thioredox 99.1 1.2E-10 4E-15 107.7 10.0 91 47-137 81-200 (352)
275 3s9f_A Tryparedoxin; thioredox 99.1 1.7E-10 5.9E-15 95.4 9.9 68 47-114 47-142 (165)
276 2cvb_A Probable thiol-disulfid 99.1 1.9E-10 6.4E-15 97.4 10.3 89 47-135 32-158 (188)
277 3erw_A Sporulation thiol-disul 99.1 2.1E-10 7E-15 92.5 9.9 86 177-262 33-144 (145)
278 1o73_A Tryparedoxin; electron 99.1 1.6E-10 5.4E-15 93.2 9.2 68 47-114 27-122 (144)
279 3eur_A Uncharacterized protein 99.1 1.1E-10 3.6E-15 94.0 7.9 83 47-132 30-141 (142)
280 1jfu_A Thiol:disulfide interch 99.1 3.5E-10 1.2E-14 95.5 11.4 89 47-135 59-179 (186)
281 3or5_A Thiol:disulfide interch 99.1 5.6E-10 1.9E-14 92.2 11.6 92 177-268 33-152 (165)
282 3raz_A Thioredoxin-related pro 99.1 6E-10 2.1E-14 90.6 11.5 91 177-267 23-140 (151)
283 2f9s_A Thiol-disulfide oxidore 99.1 3.5E-10 1.2E-14 92.0 9.7 91 177-267 25-138 (151)
284 2lja_A Putative thiol-disulfid 99.1 5.2E-10 1.8E-14 91.0 10.6 93 177-269 29-145 (152)
285 3kp9_A Vkorc1/thioredoxin doma 99.1 4.4E-11 1.5E-15 106.7 4.1 71 51-132 200-276 (291)
286 1z6n_A Hypothetical protein PA 99.1 1.5E-10 5.3E-15 95.3 6.8 96 165-263 41-139 (167)
287 2fgx_A Putative thioredoxin; N 99.1 2.6E-10 8.9E-15 85.6 7.0 77 180-262 30-106 (107)
288 3ia1_A THIO-disulfide isomeras 99.1 4.6E-10 1.6E-14 91.6 9.1 89 179-269 31-146 (154)
289 3gl3_A Putative thiol:disulfid 99.1 1.1E-09 3.9E-14 88.9 11.4 94 177-270 27-145 (152)
290 2l5o_A Putative thioredoxin; s 99.1 1.5E-09 5.2E-14 88.3 12.1 93 177-269 27-143 (153)
291 3ph9_A Anterior gradient prote 99.1 7.5E-10 2.6E-14 89.3 10.0 91 175-266 41-144 (151)
292 2e7p_A Glutaredoxin; thioredox 99.1 7.3E-11 2.5E-15 91.4 3.8 84 43-134 15-106 (116)
293 3hcz_A Possible thiol-disulfid 99.1 4.6E-10 1.6E-14 90.8 8.5 90 177-266 30-145 (148)
294 4evm_A Thioredoxin family prot 99.0 1.1E-09 3.8E-14 87.1 10.3 88 177-264 21-136 (138)
295 3u5r_E Uncharacterized protein 99.0 9.9E-10 3.4E-14 95.2 10.7 101 32-135 43-186 (218)
296 3lor_A Thiol-disulfide isomera 99.0 1.2E-09 4.3E-14 89.6 10.4 91 177-267 29-155 (160)
297 2rli_A SCO2 protein homolog, m 99.0 1.2E-09 4E-14 90.8 9.9 91 47-137 25-165 (171)
298 4fo5_A Thioredoxin-like protei 99.0 5.8E-10 2E-14 89.8 7.6 82 47-131 31-140 (143)
299 3drn_A Peroxiredoxin, bacterio 99.0 2.3E-09 7.9E-14 88.2 11.3 90 47-136 27-145 (161)
300 2h30_A Thioredoxin, peptide me 99.0 2.8E-10 9.5E-15 93.9 5.7 105 161-266 22-155 (164)
301 2k8s_A Thioredoxin; dimer, str 99.0 2.3E-10 7.9E-15 82.0 4.4 61 51-113 3-64 (80)
302 2ggt_A SCO1 protein homolog, m 99.0 8.9E-10 3.1E-14 90.8 8.4 89 47-135 22-160 (164)
303 3ira_A Conserved protein; meth 99.0 1.9E-09 6.4E-14 88.8 10.0 82 162-244 24-116 (173)
304 3eyt_A Uncharacterized protein 99.0 2E-09 6.8E-14 88.2 10.2 91 177-267 27-152 (158)
305 2lrn_A Thiol:disulfide interch 99.0 3.3E-09 1.1E-13 86.2 11.0 88 177-267 28-141 (152)
306 3lwa_A Secreted thiol-disulfid 99.0 2.9E-09 9.9E-14 89.6 10.6 91 177-267 58-181 (183)
307 1wjk_A C330018D20RIK protein; 99.0 5.1E-10 1.7E-14 83.9 5.1 79 47-134 14-94 (100)
308 2b1k_A Thiol:disulfide interch 99.0 1.5E-09 5E-14 90.0 8.3 89 176-267 49-160 (168)
309 3fkf_A Thiol-disulfide oxidore 99.0 2.3E-09 7.7E-14 86.6 9.1 87 177-266 32-145 (148)
310 1ttz_A Conserved hypothetical 99.0 7.9E-10 2.7E-14 80.1 5.6 75 181-266 2-76 (87)
311 2l4c_A Endoplasmic reticulum r 99.0 6E-09 2.1E-13 80.9 11.0 97 160-265 21-122 (124)
312 2ls5_A Uncharacterized protein 98.5 7.1E-11 2.4E-15 97.1 0.0 87 47-134 32-146 (159)
313 1hyu_A AHPF, alkyl hydroperoxi 99.0 2.4E-09 8.3E-14 105.3 10.9 95 34-134 103-198 (521)
314 3cmi_A Peroxiredoxin HYR1; thi 99.0 1.6E-09 5.6E-14 90.0 8.3 88 47-135 31-167 (171)
315 2lus_A Thioredoxion; CR-Trp16, 98.5 9.3E-11 3.2E-15 94.4 0.0 70 47-116 24-123 (143)
316 1ego_A Glutaredoxin; electron 98.9 2E-09 6.7E-14 78.1 6.9 74 52-134 3-82 (85)
317 2k6v_A Putative cytochrome C o 98.9 8E-10 2.7E-14 91.9 5.3 87 47-133 34-170 (172)
318 2v1m_A Glutathione peroxidase; 98.9 6.3E-09 2.2E-13 86.1 10.4 90 47-136 30-167 (169)
319 1kng_A Thiol:disulfide interch 98.9 2.9E-09 1E-13 86.9 8.1 89 177-267 41-152 (156)
320 2p5q_A Glutathione peroxidase 98.9 3.4E-09 1.2E-13 87.9 8.6 89 47-135 31-167 (170)
321 3hdc_A Thioredoxin family prot 98.9 6.3E-09 2.2E-13 85.2 9.9 89 177-265 40-150 (158)
322 2vup_A Glutathione peroxidase- 98.9 4.5E-09 1.6E-13 89.0 9.3 90 47-136 47-185 (190)
323 3ha9_A Uncharacterized thiored 98.9 7.1E-09 2.4E-13 85.5 10.2 87 177-266 36-163 (165)
324 3kcm_A Thioredoxin family prot 98.9 6.7E-09 2.3E-13 84.5 9.8 90 177-266 27-142 (154)
325 2lrt_A Uncharacterized protein 98.9 7E-09 2.4E-13 84.3 9.7 85 177-261 34-142 (152)
326 3kij_A Probable glutathione pe 98.9 8.8E-09 3E-13 86.3 10.0 94 47-140 37-174 (180)
327 2ywi_A Hypothetical conserved 98.8 1.2E-08 4.1E-13 86.8 9.8 90 179-268 47-175 (196)
328 1we0_A Alkyl hydroperoxide red 98.8 4.8E-09 1.6E-13 88.6 7.1 89 47-135 30-156 (187)
329 3ewl_A Uncharacterized conserv 98.8 1.1E-08 3.6E-13 82.1 8.6 86 177-265 26-139 (142)
330 3s9f_A Tryparedoxin; thioredox 98.8 1.9E-08 6.5E-13 83.0 10.2 66 177-242 47-138 (165)
331 2f8a_A Glutathione peroxidase 98.8 1.3E-08 4.4E-13 87.3 9.3 89 47-135 46-206 (208)
332 2bmx_A Alkyl hydroperoxidase C 98.8 6.2E-09 2.1E-13 88.5 7.3 89 47-135 44-169 (195)
333 3dwv_A Glutathione peroxidase- 98.8 6.9E-09 2.4E-13 87.6 7.5 90 47-136 45-183 (187)
334 1i5g_A Tryparedoxin II; electr 98.8 1.8E-08 6.1E-13 81.0 9.6 68 177-244 27-121 (144)
335 3eur_A Uncharacterized protein 98.8 1.6E-08 5.3E-13 81.2 9.1 83 178-263 31-141 (142)
336 1o8x_A Tryparedoxin, TRYX, TXN 98.8 1.9E-08 6.5E-13 81.1 9.7 68 177-244 27-121 (146)
337 2hyx_A Protein DIPZ; thioredox 98.8 2.2E-08 7.5E-13 92.5 11.1 94 177-270 81-202 (352)
338 3kh7_A Thiol:disulfide interch 98.8 1.5E-08 5.1E-13 84.6 9.1 88 177-267 57-167 (176)
339 1xvw_A Hypothetical protein RV 98.8 9.1E-09 3.1E-13 84.4 7.6 79 47-125 34-145 (160)
340 2cvb_A Probable thiol-disulfid 98.8 2.3E-08 7.8E-13 84.4 10.2 90 177-268 32-160 (188)
341 3fw2_A Thiol-disulfide oxidore 98.8 4.1E-08 1.4E-12 79.5 11.3 87 177-266 32-147 (150)
342 2p31_A CL683, glutathione pero 98.8 5.7E-09 1.9E-13 87.6 6.2 88 47-134 48-179 (181)
343 2dlx_A UBX domain-containing p 98.8 5E-08 1.7E-12 78.7 11.5 102 168-270 29-139 (153)
344 3gyk_A 27KDA outer membrane pr 98.8 2.3E-08 7.9E-13 83.3 9.8 83 47-135 21-172 (175)
345 1eej_A Thiol:disulfide interch 98.8 1.5E-08 5.1E-13 87.6 8.7 82 47-135 85-210 (216)
346 1zof_A Alkyl hydroperoxide-red 98.8 4.7E-09 1.6E-13 89.5 5.4 88 47-134 32-159 (198)
347 1o73_A Tryparedoxin; electron 98.8 2.6E-08 8.7E-13 80.0 9.4 68 177-244 27-121 (144)
348 1jfu_A Thiol:disulfide interch 98.8 5.1E-08 1.7E-12 82.1 11.2 91 177-267 59-180 (186)
349 2gs3_A PHGPX, GPX-4, phospholi 98.7 2E-08 6.7E-13 84.6 8.0 88 47-134 48-184 (185)
350 2obi_A PHGPX, GPX-4, phospholi 98.7 9.9E-09 3.4E-13 86.3 6.2 86 47-132 46-180 (183)
351 1t3b_A Thiol:disulfide interch 98.7 4.2E-08 1.4E-12 84.3 8.5 80 47-133 85-208 (211)
352 1un2_A DSBA, thiol-disulfide i 98.7 7E-08 2.4E-12 81.7 9.2 118 91-221 39-159 (197)
353 2ggt_A SCO1 protein homolog, m 98.7 9E-08 3.1E-12 78.6 9.6 91 177-267 22-161 (164)
354 3kp9_A Vkorc1/thioredoxin doma 98.7 1.6E-08 5.5E-13 90.2 5.2 70 181-262 200-275 (291)
355 2rli_A SCO2 protein homolog, m 98.7 1.6E-07 5.3E-12 77.8 11.0 91 178-268 26-165 (171)
356 3u5r_E Uncharacterized protein 98.7 1.1E-07 3.8E-12 82.2 10.3 88 178-267 58-187 (218)
357 2b7k_A SCO1 protein; metalloch 98.6 1.2E-07 4.2E-12 80.8 10.0 90 47-136 40-179 (200)
358 1uul_A Tryparedoxin peroxidase 98.6 6.4E-08 2.2E-12 82.7 7.9 89 47-135 35-164 (202)
359 4fo5_A Thioredoxin-like protei 98.6 1.5E-07 5E-12 75.5 9.4 83 177-262 31-140 (143)
360 1qmv_A Human thioredoxin perox 98.6 6.3E-08 2.1E-12 82.4 7.5 89 47-135 33-162 (197)
361 3h93_A Thiol:disulfide interch 98.6 1.3E-07 4.4E-12 80.0 9.4 89 47-137 24-185 (192)
362 2jsy_A Probable thiol peroxida 98.6 1.7E-07 5.8E-12 77.3 9.5 87 47-134 43-165 (167)
363 2k8s_A Thioredoxin; dimer, str 98.6 2.1E-08 7.3E-13 71.6 3.3 58 181-238 3-61 (80)
364 3drn_A Peroxiredoxin, bacterio 98.6 2.4E-07 8.4E-12 75.9 9.8 77 178-254 28-132 (161)
365 1wjk_A C330018D20RIK protein; 98.6 5.2E-08 1.8E-12 72.8 5.2 78 178-265 15-94 (100)
366 1zye_A Thioredoxin-dependent p 98.6 8.5E-08 2.9E-12 83.0 7.2 88 47-134 55-183 (220)
367 2h01_A 2-Cys peroxiredoxin; th 98.6 2.5E-07 8.4E-12 78.3 9.7 88 47-134 30-157 (192)
368 3hd5_A Thiol:disulfide interch 98.6 4.1E-07 1.4E-11 77.1 10.9 43 47-89 24-66 (195)
369 2i81_A 2-Cys peroxiredoxin; st 98.6 1.3E-07 4.4E-12 81.4 7.7 88 47-134 51-178 (213)
370 3ztl_A Thioredoxin peroxidase; 98.5 1.9E-07 6.4E-12 81.0 8.0 79 47-125 68-183 (222)
371 1xvq_A Thiol peroxidase; thior 98.5 2.6E-07 8.9E-12 76.9 8.2 86 47-134 43-163 (175)
372 1v58_A Thiol:disulfide interch 98.5 1.9E-07 6.5E-12 81.9 7.7 85 48-135 97-232 (241)
373 2vup_A Glutathione peroxidase- 98.5 4.6E-07 1.6E-11 76.5 9.6 91 177-267 47-185 (190)
374 3gkn_A Bacterioferritin comigr 98.5 3.5E-07 1.2E-11 75.0 8.5 77 47-123 34-146 (163)
375 2k6v_A Putative cytochrome C o 98.5 1.3E-07 4.6E-12 78.2 5.8 88 177-265 34-171 (172)
376 3cmi_A Peroxiredoxin HYR1; thi 98.5 3.2E-07 1.1E-11 76.0 7.9 89 177-266 31-167 (171)
377 2ls5_A Uncharacterized protein 97.9 1.7E-08 5.7E-13 82.7 0.0 87 177-264 32-145 (159)
378 1r7h_A NRDH-redoxin; thioredox 98.5 2.8E-07 9.4E-12 64.7 6.4 68 52-131 3-73 (75)
379 1ego_A Glutaredoxin; electron 98.5 3.3E-07 1.1E-11 66.1 6.9 76 181-266 2-83 (85)
380 2v1m_A Glutathione peroxidase; 98.5 6.4E-07 2.2E-11 73.9 9.5 91 177-267 30-167 (169)
381 1xzo_A BSSCO, hypothetical pro 98.5 1.9E-07 6.4E-12 77.5 6.3 89 47-135 32-171 (174)
382 2bmx_A Alkyl hydroperoxidase C 98.4 4.6E-07 1.6E-11 76.8 8.2 89 178-266 45-169 (195)
383 2l4c_A Endoplasmic reticulum r 98.4 1.9E-06 6.5E-11 66.7 10.8 97 29-134 20-122 (124)
384 2lus_A Thioredoxion; CR-Trp16, 97.8 2.4E-08 8.3E-13 80.0 0.0 67 178-244 25-120 (143)
385 2p5q_A Glutathione peroxidase 98.4 5.4E-07 1.8E-11 74.4 8.1 90 177-266 31-167 (170)
386 1kte_A Thioltransferase; redox 98.4 1.1E-07 3.8E-12 71.8 3.3 60 51-115 13-79 (105)
387 2e7p_A Glutaredoxin; thioredox 98.4 8.4E-08 2.9E-12 73.9 2.6 79 179-265 20-106 (116)
388 2hze_A Glutaredoxin-1; thiored 98.4 5.7E-08 2E-12 74.6 1.5 62 49-115 18-86 (114)
389 1we0_A Alkyl hydroperoxide red 98.4 4.3E-07 1.5E-11 76.4 7.0 91 177-267 30-157 (187)
390 1h75_A Glutaredoxin-like prote 98.4 2.4E-07 8.2E-12 66.2 4.4 68 52-131 3-73 (81)
391 2a4v_A Peroxiredoxin DOT5; yea 98.4 1E-06 3.5E-11 71.9 8.6 81 48-129 35-144 (159)
392 1zof_A Alkyl hydroperoxide-red 98.4 3.5E-07 1.2E-11 77.8 5.9 90 177-266 32-160 (198)
393 2i3y_A Epididymal secretory gl 98.4 1.5E-06 5.2E-11 74.5 9.3 88 47-135 55-210 (215)
394 2p31_A CL683, glutathione pero 98.3 7.4E-07 2.5E-11 74.5 7.0 89 177-265 48-179 (181)
395 1xvw_A Hypothetical protein RV 98.3 1.3E-06 4.6E-11 71.2 8.4 84 179-262 37-155 (160)
396 2r37_A Glutathione peroxidase 98.3 2.1E-06 7.2E-11 73.2 9.8 91 47-138 37-195 (207)
397 2cq9_A GLRX2 protein, glutared 98.3 2.8E-07 9.6E-12 72.4 3.8 67 38-115 18-91 (130)
398 2f8a_A Glutathione peroxidase 98.3 2.5E-06 8.4E-11 73.0 9.4 90 177-266 46-206 (208)
399 3dwv_A Glutathione peroxidase- 98.3 2.1E-06 7.3E-11 72.1 8.9 91 177-267 45-183 (187)
400 3hz8_A Thiol:disulfide interch 98.3 6.2E-06 2.1E-10 69.6 10.9 42 47-88 23-64 (193)
401 2obi_A PHGPX, GPX-4, phospholi 98.3 1.7E-06 5.8E-11 72.4 7.1 87 177-263 46-180 (183)
402 3ixr_A Bacterioferritin comigr 98.2 5E-06 1.7E-10 69.3 9.9 76 47-122 50-161 (179)
403 3kij_A Probable glutathione pe 98.2 4.5E-06 1.5E-10 69.6 9.6 90 177-266 37-169 (180)
404 3bj5_A Protein disulfide-isome 98.2 1.5E-05 5.2E-10 63.7 11.7 111 158-269 12-129 (147)
405 2gs3_A PHGPX, GPX-4, phospholi 98.2 2.9E-06 9.9E-11 71.1 7.7 88 177-264 48-183 (185)
406 1qmv_A Human thioredoxin perox 98.2 4.2E-06 1.4E-10 70.9 8.6 90 177-266 33-162 (197)
407 2c0d_A Thioredoxin peroxidase 98.2 2.7E-06 9.1E-11 73.4 7.3 88 47-134 55-182 (221)
408 2ht9_A Glutaredoxin-2; thiored 98.2 1.1E-06 3.9E-11 70.3 4.4 56 52-115 51-113 (146)
409 1n8j_A AHPC, alkyl hydroperoxi 98.2 3.9E-06 1.3E-10 70.4 7.8 88 47-134 29-154 (186)
410 3me7_A Putative uncharacterize 98.2 5.8E-06 2E-10 68.2 8.7 88 47-134 27-160 (170)
411 4dvc_A Thiol:disulfide interch 98.2 6.4E-06 2.2E-10 68.8 9.1 86 47-134 20-180 (184)
412 3gv1_A Disulfide interchange p 98.2 4E-06 1.4E-10 67.0 7.4 79 47-134 13-137 (147)
413 1uul_A Tryparedoxin peroxidase 98.2 3.9E-06 1.3E-10 71.5 7.8 89 178-266 36-164 (202)
414 3gyk_A 27KDA outer membrane pr 98.2 8.3E-06 2.9E-10 67.6 9.3 83 177-266 21-172 (175)
415 2pn8_A Peroxiredoxin-4; thiore 98.2 4.7E-06 1.6E-10 71.4 7.9 88 47-134 47-175 (211)
416 2znm_A Thiol:disulfide interch 98.1 8.7E-06 3E-10 68.8 9.4 91 47-141 21-185 (195)
417 2lqo_A Putative glutaredoxin R 98.1 6E-06 2.1E-10 60.0 6.9 74 50-134 4-82 (92)
418 2b7k_A SCO1 protein; metalloch 98.1 7.3E-06 2.5E-10 69.6 8.4 92 177-268 40-180 (200)
419 2i81_A 2-Cys peroxiredoxin; st 98.1 8.2E-06 2.8E-10 70.0 8.8 90 177-266 51-179 (213)
420 2yzh_A Probable thiol peroxida 98.1 4.6E-06 1.6E-10 68.9 6.8 85 47-133 46-169 (171)
421 2h01_A 2-Cys peroxiredoxin; th 98.1 6.1E-06 2.1E-10 69.6 7.6 90 177-266 30-158 (192)
422 2jsy_A Probable thiol peroxida 98.1 1.4E-05 4.9E-10 65.5 9.6 88 177-265 43-165 (167)
423 1eej_A Thiol:disulfide interch 98.1 8E-06 2.7E-10 70.3 8.3 82 177-266 85-210 (216)
424 3a2v_A Probable peroxiredoxin; 98.1 3.8E-06 1.3E-10 73.5 6.2 88 47-134 32-160 (249)
425 2klx_A Glutaredoxin; thioredox 98.1 3.4E-06 1.2E-10 61.3 5.0 56 51-114 7-65 (89)
426 1zye_A Thioredoxin-dependent p 98.1 7.4E-06 2.5E-10 70.7 7.9 89 178-266 56-184 (220)
427 3ic4_A Glutaredoxin (GRX-1); s 98.1 5.2E-06 1.8E-10 60.7 5.9 69 52-132 14-91 (92)
428 1psq_A Probable thiol peroxida 98.1 8.3E-06 2.8E-10 66.8 7.6 73 47-120 41-144 (163)
429 3l9v_A Putative thiol-disulfid 98.1 7E-06 2.4E-10 69.0 6.8 41 48-88 14-57 (189)
430 1t3b_A Thiol:disulfide interch 98.0 1.6E-05 5.5E-10 68.0 9.1 80 177-264 85-208 (211)
431 4g2e_A Peroxiredoxin; redox pr 98.0 2.2E-06 7.5E-11 69.8 3.2 68 47-114 29-131 (157)
432 3qpm_A Peroxiredoxin; oxidored 98.0 1.5E-05 5.1E-10 69.7 8.6 86 47-132 76-202 (240)
433 2rem_A Disulfide oxidoreductas 98.0 3.9E-05 1.3E-09 64.6 11.0 40 48-87 25-64 (193)
434 1z6m_A Conserved hypothetical 98.0 2.6E-05 9E-10 64.5 9.8 38 48-85 27-66 (175)
435 1r7h_A NRDH-redoxin; thioredox 98.0 1.9E-05 6.4E-10 55.0 7.5 68 182-262 3-73 (75)
436 3feu_A Putative lipoprotein; a 98.0 1E-05 3.4E-10 67.7 6.9 30 48-77 22-51 (185)
437 3c1r_A Glutaredoxin-1; oxidize 98.0 3.6E-06 1.2E-10 64.7 3.8 58 52-114 27-92 (118)
438 3qmx_A Glutaredoxin A, glutare 98.0 1.2E-05 4.1E-10 59.6 6.4 60 47-114 13-77 (99)
439 1q98_A Thiol peroxidase, TPX; 98.0 1.8E-05 6.1E-10 64.9 7.9 72 47-119 42-147 (165)
440 1tp9_A Peroxiredoxin, PRX D (t 98.0 1.1E-05 3.6E-10 66.1 6.4 74 47-120 34-145 (162)
441 3uma_A Hypothetical peroxiredo 98.0 2.7E-05 9.4E-10 64.9 9.0 86 47-132 55-182 (184)
442 2yan_A Glutaredoxin-3; oxidore 98.0 1.6E-05 5.5E-10 59.7 6.6 55 52-114 19-82 (105)
443 3p7x_A Probable thiol peroxida 98.0 1.2E-05 4E-10 66.0 6.4 69 47-117 45-144 (166)
444 1xzo_A BSSCO, hypothetical pro 98.0 1.5E-05 5.2E-10 65.8 7.2 90 177-266 32-171 (174)
445 3ztl_A Thioredoxin peroxidase; 97.9 1.2E-05 4.1E-10 69.5 6.5 88 177-264 68-195 (222)
446 2wfc_A Peroxiredoxin 5, PRDX5; 97.9 1.7E-05 5.7E-10 65.2 6.7 43 47-89 30-76 (167)
447 2ec4_A FAS-associated factor 1 97.9 5.3E-05 1.8E-09 62.4 9.6 93 45-137 52-169 (178)
448 3gkn_A Bacterioferritin comigr 97.9 3.6E-05 1.2E-09 62.8 8.5 86 178-263 35-158 (163)
449 1un2_A DSBA, thiol-disulfide i 97.9 3.5E-06 1.2E-10 71.2 2.4 45 47-91 112-159 (197)
450 4gqc_A Thiol peroxidase, perox 97.9 2.9E-06 1E-10 69.6 1.7 89 46-134 31-158 (164)
451 1xvq_A Thiol peroxidase; thior 97.9 3E-05 1E-09 64.2 7.5 71 178-250 44-146 (175)
452 3tjj_A Peroxiredoxin-4; thiore 97.9 2.7E-05 9.2E-10 68.6 7.1 86 47-132 90-216 (254)
453 3nzn_A Glutaredoxin; structura 97.8 4E-05 1.4E-09 57.2 7.0 73 48-131 20-101 (103)
454 3zrd_A Thiol peroxidase; oxido 97.8 5.5E-05 1.9E-09 64.1 8.6 71 47-118 77-181 (200)
455 3h93_A Thiol:disulfide interch 97.8 5.9E-05 2E-09 63.4 8.7 42 177-218 24-65 (192)
456 1fov_A Glutaredoxin 3, GRX3; a 97.8 3.7E-05 1.3E-09 54.6 6.2 55 52-114 3-61 (82)
457 2khp_A Glutaredoxin; thioredox 97.8 3.1E-05 1.1E-09 56.5 5.8 56 51-114 7-66 (92)
458 3l9s_A Thiol:disulfide interch 97.8 6.7E-05 2.3E-09 63.0 8.2 40 48-87 21-63 (191)
459 3rhb_A ATGRXC5, glutaredoxin-C 97.8 3.2E-05 1.1E-09 58.9 5.5 62 43-114 14-83 (113)
460 1v58_A Thiol:disulfide interch 97.8 9.1E-05 3.1E-09 64.7 9.0 85 178-265 97-231 (241)
461 2i3y_A Epididymal secretory gl 97.8 0.00019 6.7E-09 61.3 10.7 42 177-219 55-97 (215)
462 1h75_A Glutaredoxin-like prote 97.8 5.7E-05 1.9E-09 53.5 6.3 68 182-262 3-73 (81)
463 3hd5_A Thiol:disulfide interch 97.7 0.00015 5E-09 61.1 9.7 43 177-219 24-66 (195)
464 1kte_A Thioltransferase; redox 97.7 2.5E-05 8.7E-10 58.5 4.3 54 181-237 13-73 (105)
465 3mng_A Peroxiredoxin-5, mitoch 97.7 0.00013 4.3E-09 60.2 8.8 85 47-131 42-170 (173)
466 2a4v_A Peroxiredoxin DOT5; yea 97.7 0.00016 5.6E-09 58.6 8.9 74 179-253 36-137 (159)
467 1nm3_A Protein HI0572; hybrid, 97.7 0.00039 1.3E-08 60.7 11.8 44 177-220 32-79 (241)
468 2r37_A Glutathione peroxidase 97.6 0.00037 1.3E-08 59.2 10.3 42 177-219 37-79 (207)
469 3me7_A Putative uncharacterize 97.6 0.00026 8.7E-09 58.2 9.0 90 178-267 28-162 (170)
470 1n8j_A AHPC, alkyl hydroperoxi 97.6 0.00022 7.4E-09 59.6 8.5 89 178-266 30-155 (186)
471 2c0d_A Thioredoxin peroxidase 97.6 0.00018 6.3E-09 61.8 8.2 90 177-266 55-183 (221)
472 3msz_A Glutaredoxin 1; alpha-b 97.6 0.00013 4.3E-09 52.7 6.1 73 50-134 4-85 (89)
473 4hde_A SCO1/SENC family lipopr 97.6 0.00028 9.5E-09 58.0 8.9 43 47-89 31-77 (170)
474 3a2v_A Probable peroxiredoxin; 97.6 0.00011 3.9E-09 64.1 6.8 87 180-266 36-161 (249)
475 3ixr_A Bacterioferritin comigr 97.6 0.00032 1.1E-08 58.1 9.3 86 178-263 51-174 (179)
476 2hze_A Glutaredoxin-1; thiored 97.6 3.7E-05 1.3E-09 58.7 3.1 56 180-238 19-81 (114)
477 3ctg_A Glutaredoxin-2; reduced 97.5 7.5E-05 2.6E-09 58.2 4.6 58 52-114 39-104 (129)
478 2cq9_A GLRX2 protein, glutared 97.5 0.00013 4.3E-09 57.1 5.9 51 182-238 29-86 (130)
479 1wik_A Thioredoxin-like protei 97.5 0.00019 6.6E-09 54.1 6.6 66 38-114 6-80 (109)
480 2pn8_A Peroxiredoxin-4; thiore 97.5 0.0003 1E-08 60.1 8.4 89 178-266 48-176 (211)
481 1prx_A HORF6; peroxiredoxin, h 97.5 0.00041 1.4E-08 59.8 9.3 85 50-134 34-167 (224)
482 2pwj_A Mitochondrial peroxired 97.5 7.8E-05 2.7E-09 61.4 4.5 58 48-105 44-108 (171)
483 2lqo_A Putative glutaredoxin R 97.5 0.00061 2.1E-08 49.3 8.3 74 181-266 5-83 (92)
484 3f4s_A Alpha-DSBA1, putative u 97.5 0.0015 5.1E-08 56.2 12.3 94 48-141 39-216 (226)
485 3h8q_A Thioredoxin reductase 3 97.5 0.00015 5.3E-09 55.1 5.3 55 52-114 19-80 (114)
486 3qmx_A Glutaredoxin A, glutare 97.4 0.00031 1.1E-08 51.8 6.7 55 178-238 14-73 (99)
487 2yzh_A Probable thiol peroxida 97.4 0.00034 1.2E-08 57.4 7.8 42 178-220 47-89 (171)
488 3ic4_A Glutaredoxin (GRX-1); s 97.4 0.00026 8.7E-09 51.4 6.2 70 181-263 13-91 (92)
489 2v2g_A Peroxiredoxin 6; oxidor 97.4 0.00033 1.1E-08 60.6 7.6 87 48-134 29-163 (233)
490 2klx_A Glutaredoxin; thioredox 97.4 0.00016 5.4E-09 52.2 4.7 52 181-238 7-61 (89)
491 1xcc_A 1-Cys peroxiredoxin; un 97.4 0.00024 8.3E-09 61.0 6.6 85 50-134 34-164 (220)
492 3qpm_A Peroxiredoxin; oxidored 97.4 0.00063 2.2E-08 59.3 9.1 89 177-265 76-204 (240)
493 3c1r_A Glutaredoxin-1; oxidize 97.4 0.00011 3.7E-09 56.3 3.7 54 181-237 26-87 (118)
494 3gha_A Disulfide bond formatio 97.4 0.0013 4.5E-08 55.6 10.7 85 48-137 29-193 (202)
495 1psq_A Probable thiol peroxida 97.4 0.00066 2.3E-08 55.2 8.5 43 177-220 41-84 (163)
496 2ht9_A Glutaredoxin-2; thiored 97.3 0.00033 1.1E-08 55.7 5.9 50 182-237 51-107 (146)
497 4g2e_A Peroxiredoxin; redox pr 97.3 0.00014 4.7E-09 58.9 3.7 86 178-263 30-154 (157)
498 1fov_A Glutaredoxin 3, GRX3; a 97.2 0.00078 2.7E-08 47.5 6.1 51 181-237 2-56 (82)
499 2yan_A Glutaredoxin-3; oxidore 97.1 0.00053 1.8E-08 51.2 5.1 50 182-237 19-77 (105)
500 3p7x_A Probable thiol peroxida 97.1 0.00098 3.3E-08 54.3 7.1 65 178-244 46-140 (166)
No 1
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=2.5e-43 Score=332.71 Aligned_cols=322 Identities=17% Similarity=0.285 Sum_probs=269.2
Q ss_pred cCCCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhh------HHHHHHHHHhcC-ceEEEEEcCcccHhHHHHc
Q 014216 26 YGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALT------PIWEKAATVLKG-VATVAALDANEHQSLAQEY 98 (428)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~------~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~ 98 (428)
+.....+.+|+.++|++ ++.++++++|.|||+||++|+... |.|++++..+++ .+.++.|||++++++|++|
T Consensus 9 ~~~~~~v~~lt~~~f~~-~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~ 87 (367)
T 3us3_A 9 YDGVDRVINVNAKNYKN-VFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKL 87 (367)
T ss_dssp CCCCCCCEECCTTTHHH-HHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHH
T ss_pred CCCCCccEECCHHHHHH-HHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHc
Confidence 44567899999999994 557789999999999999974443 689999999987 4999999999999999999
Q ss_pred CCccccEEEEEeCCCCCccccCCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCc-cchHHHHhhc
Q 014216 99 GIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNS-SNFDELVLKS 177 (428)
Q Consensus 99 ~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~~~~~~~ 177 (428)
+|+++||+++|++|+. ..|.|.++.+.|.+|+.+.+ .+.+..+++ +++.+++...
T Consensus 88 ~V~~~PTl~~f~~G~~-~~y~G~~~~~~i~~~i~~~~-----------------------~~~v~~i~~~~~~~~~~~~~ 143 (367)
T 3us3_A 88 GLTEEDSIYVFKEDEV-IEYDGEFSADTLVEFLLDVL-----------------------EDPVELIEGERELQAFENIE 143 (367)
T ss_dssp TCCSTTEEEEEETTEE-EECCSCCSHHHHHHHHHHHH-----------------------SCSEEECCSHHHHHHHHHCC
T ss_pred CCCcCceEEEEECCcE-EEeCCCCCHHHHHHHHHHhc-----------------------CCCcEEcCCHHHHHHHhccC
Confidence 9999999999999875 69999999999999999885 677888865 6666665325
Q ss_pred CCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCC-CCHH
Q 014216 178 KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGA-RTAG 256 (428)
Q Consensus 178 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~-~~~~ 256 (428)
+.+++|.|++++| ....+.|.++|..+++.+.|+.+. +..++++|+++. |+|++|+...+.+..|.|. .+.+
T Consensus 144 ~~~~vv~ff~~~~---~~~~~~f~~~A~~~~~~~~F~~~~---~~~~~~~~~v~~-p~i~lf~~~~~~~~~y~g~~~~~~ 216 (367)
T 3us3_A 144 DEIKLIGYFKNKD---SEHYKAFKEAAEEFHPYIPFFATF---DSKVAKKLTLKL-NEIDFYEAFMEEPVTIPDKPNSEE 216 (367)
T ss_dssp SSCEEEEECSCTT---CHHHHHHHHHHHHHTTTSCEEEEC---CHHHHHHHTCCT-TCEEEECTTCSSCEECSSSSCCHH
T ss_pred CCcEEEEEECCCC---chHHHHHHHHHHhhcCCcEEEEEC---CHHHHHHcCCCC-CeEEEEcCCCCCCeecCCCCCCHH
Confidence 6889999999876 568899999999999999999874 578999999996 9999998766778999995 8999
Q ss_pred HHHHHHHHHHhhcCCCCcceecCchhhhhhhcCC-CCeEEEEecCCccchhhhchhHHHHHHHHHHHHhhcC-cceEEEe
Q 014216 257 AIESFALEQLETNVAPPEVTELTSQDVMEEKCGS-AAICFVSFLPDILDSKAEGRNKYLEMLLSVAEKFKRG-HYSFVWA 334 (428)
Q Consensus 257 ~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~~~~vi~f~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~f~~i 334 (428)
+|.+|+..+ ..|.|.+++..+..+.+... .+.++++|.+. .....+++.+.++.+|++|+++ .+.|+|+
T Consensus 217 ~l~~fi~~~-----~~p~v~elt~~~~~~~~~~~~~~~~~~~f~~~----~~~~~~~~~~~l~~vA~~~~~~~ki~F~~i 287 (367)
T 3us3_A 217 EIVNFVEEH-----RRSTLRKLKPESMYETWEDDMDGIHIVAFAEE----ADPDGYEFLEILKSVAQDNTDNPDLSIIWI 287 (367)
T ss_dssp HHHHHHHHT-----CSCSEEECCGGGHHHHHHSCBTTEEEEEECCT----TSHHHHHHHHHHHHHHHHTTTCTTCCEEEE
T ss_pred HHHHHHHHc-----CccceeecChhhHHHHHhhccCCcEEEEEEcC----CChhHHHHHHHHHHHHHHcCCCCceEEEEE
Confidence 999999998 57999999998877766643 34566667653 2234667889999999999994 3999999
Q ss_pred cCCCchhHH----HHhCCCCCCCceEEEEeccCC--ccccCCC---CCCHHHHHHHHHHHhcCC
Q 014216 335 AAGKQPDLE----NRVGVGGYGYPALVALNVKKG--VYTPLKS---AFELEHIVEFVKEAGRGG 389 (428)
Q Consensus 335 d~~~~~~~~----~~~gl~~~~~P~~~i~~~~~~--~~~~~~~---~~~~~~i~~fi~~~~~g~ 389 (428)
|...++..+ +.||++. .+|++++++..++ +++.+.+ ++|.++|.+|++++++|+
T Consensus 288 d~~~~~~~l~~~~~~fgl~~-~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gk 350 (367)
T 3us3_A 288 DPDDFPLLVPYWEKTFDIDL-SAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGE 350 (367)
T ss_dssp CGGGCTTTHHHHHHHHTCCT-TSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHTS
T ss_pred CCccchhHHHHHHHhcCCCC-CCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcCC
Confidence 988777654 4599984 7999999998766 3555553 799999999999999996
No 2
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=4.8e-41 Score=315.92 Aligned_cols=320 Identities=19% Similarity=0.259 Sum_probs=269.2
Q ss_pred CCCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHH-------HHHHHHHhcC-ceEEEEEcCcccHhHHHHc
Q 014216 27 GSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPI-------WEKAATVLKG-VATVAALDANEHQSLAQEY 98 (428)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~-------~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~ 98 (428)
.....+.+++.++|+ .++.++++++|+|||+||+ |+++.|. |+++++.+++ .+.++.|||++++++|++|
T Consensus 8 ~~~~~v~~l~~~~f~-~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~ 85 (350)
T 1sji_A 8 DGKDRVVSLTEKNFK-QVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKL 85 (350)
T ss_dssp CCCCCCEEECHHHHH-HHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHH
T ss_pred CCCCccEECCHHHHH-HHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhc
Confidence 345679999999999 5567789999999999999 9999888 9999999987 4999999999999999999
Q ss_pred CCccccEEEEEeCCCCCccccCCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCc-cchHHHHhh-
Q 014216 99 GIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNS-SNFDELVLK- 176 (428)
Q Consensus 99 ~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~~~~~~- 176 (428)
+|+++||+++|++|+ ..+|.|.++.+.|.+|+.+. ..+.+..+++ +++.+++ .
T Consensus 86 ~v~~~Pt~~~~~~g~-~~~~~G~~~~~~l~~~i~~~-----------------------~~~~~~~l~~~~~~~~~~-~~ 140 (350)
T 1sji_A 86 GFDEEGSLYVLKGDR-TIEFDGEFAADVLVEFLLDL-----------------------IEDPVEIINSKLEVQAFE-RI 140 (350)
T ss_dssp TCCSTTEEEEEETTE-EEEECSCCCHHHHHHHHHTT-----------------------SSCSEEECCSHHHHHHHH-HC
T ss_pred CCCccceEEEEECCc-EEEecCCCCHHHHHHHHHHh-----------------------cCCcceeccchHHHHHHh-cc
Confidence 999999999999998 67999999999999999877 3677888864 5666665 4
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCC-CCH
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGA-RTA 255 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~-~~~ 255 (428)
.+..++|.|++++| ....+.|.++|..+++.+.|+.+ .+++++++++++ +|++++|+..++.+..|.|. .+.
T Consensus 141 ~~~~~vv~ff~~~~---~~~~~~~~~~A~~~~~~~~f~~~---~~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~ 213 (350)
T 1sji_A 141 EDQIKLIGFFKSEE---SEYYKAFEEAAEHFQPYIKFFAT---FDKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTE 213 (350)
T ss_dssp CSSCEEEEECSCTT---SHHHHHHHHHHHHTTTTSEEEEE---CCHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCH
T ss_pred CCCcEEEEEECCCC---cHHHHHHHHHHHhhccCcEEEEE---CCHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCH
Confidence 56678999999976 45678999999999999999987 457899999999 89999998766678899997 899
Q ss_pred HHHHHHHHHHHhhcCCCCcceecCchhhhhhhcCCC-CeEEEEecCCccchhhhchhHHHHHHHHHHHHhhc-CcceEEE
Q 014216 256 GAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSA-AICFVSFLPDILDSKAEGRNKYLEMLLSVAEKFKR-GHYSFVW 333 (428)
Q Consensus 256 ~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~-~~~vi~f~~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~f~~ 333 (428)
++|.+|+..+ ..|.+.+++..+......... +.++++|...+. .....+++.++++|++|++ .++.|++
T Consensus 214 ~~l~~fi~~~-----~~p~v~elt~~~~~~~~~~~~~~~~~l~f~~~~~----~~~~~~~~~~~~vA~~~~~~~~~~f~~ 284 (350)
T 1sji_A 214 EELVEFVKEH-----QRPTLRRLRPEDMFETWEDDLNGIHIVAFAERSD----PDGYEFLEILKQVARDNTDNPDLSIVW 284 (350)
T ss_dssp HHHHHHHHHH-----CCCSEEECCTTTHHHHHHSCSSSEEEEEECCTTS----HHHHHHHHHHHHHHHHGGGCSSCCEEE
T ss_pred HHHHHHHHHc-----CccchhhcChhhHHHHhcCCCCCcEEEEEEcCCC----ccHHHHHHHHHHHHHHhCCCCceEEEE
Confidence 9999999998 579999999988766543333 677887765421 2245788999999999996 3399999
Q ss_pred ecCCCchhHH----HHhCCCCCCCceEEEEeccCC-cccc-CC---CCCCHHHHHHHHHHHhcCCC
Q 014216 334 AAAGKQPDLE----NRVGVGGYGYPALVALNVKKG-VYTP-LK---SAFELEHIVEFVKEAGRGGK 390 (428)
Q Consensus 334 id~~~~~~~~----~~~gl~~~~~P~~~i~~~~~~-~~~~-~~---~~~~~~~i~~fi~~~~~g~~ 390 (428)
+|+..++.++ +.||++. ..|++++++..++ +|.. +. +.++.+.|.+|++++++|+.
T Consensus 285 id~~~~~~~~~~~~~~~gi~~-~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~~Gkl 349 (350)
T 1sji_A 285 IDPDDFPLLVAYWEKTFKIDL-FKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKI 349 (350)
T ss_dssp ECGGGCHHHHHHHHHHCCSCT-TSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHHHTSCC
T ss_pred ECchhhHHHHHHHHhhcCCCc-cCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHHhcCcc
Confidence 9998888877 8899983 6899999998555 5533 33 48999999999999999973
No 3
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.3e-40 Score=310.54 Aligned_cols=329 Identities=21% Similarity=0.284 Sum_probs=245.1
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHh------cCceEEEEEcCcccHhHHHHcCCccc
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVL------KGVATVAALDANEHQSLAQEYGIRGF 103 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~------~~~v~~~~vd~~~~~~l~~~~~v~~~ 103 (428)
+.+.+|+.++|+. ++.++++++|+||++||++|+++.|.|+++++.+ .+.+.++.|||+++..+|++|+|+++
T Consensus 5 ~~v~~l~~~~f~~-~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~ 83 (382)
T 2r2j_A 5 SEITSLDTENIDE-ILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKY 83 (382)
T ss_dssp ---CBCCTTTHHH-HHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEE
T ss_pred CceEECCHHHHHH-HHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcC
Confidence 4578999999994 6677899999999999999999999999999998 45699999999999999999999999
Q ss_pred cEEEEEeCCCCCc-cccCCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCc-cchHHHHhhcCCeE
Q 014216 104 PTIKVFVPGKPPV-DYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNS-SNFDELVLKSKDLW 181 (428)
Q Consensus 104 P~~~~~~~g~~~~-~~~g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~~~~~~~~~~~ 181 (428)
||+++|++|+.+. .|.|.++.+.|.+|+.+.+ .+.+..+++ +++.. + ..+..+
T Consensus 84 Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~-----------------------~~~v~~l~~~~~l~~-l-~~~~~~ 138 (382)
T 2r2j_A 84 PTLKLFRNGMMMKREYRGQRSVKALADYIRQQK-----------------------SDPIQEIRDLAEITT-L-DRSKRN 138 (382)
T ss_dssp SEEEEEETTEEEEEECCSCCSHHHHHHHHHHHH-----------------------SCCCEEC--------------CCE
T ss_pred CEEEEEeCCcEeeeeecCcchHHHHHHHHHHhc-----------------------cCCceecCCHHHHHH-h-cCCCCE
Confidence 9999999998655 5999999999999999886 456777754 34554 3 556788
Q ss_pred EEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCC-CCCcccccCCC-CHHHHH
Q 014216 182 IVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGAD-KDSPIPYEGAR-TAGAIE 259 (428)
Q Consensus 182 ~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~-~~~~~~y~g~~-~~~~i~ 259 (428)
+|.|+++++. .....|.++|..+++.+.|+.+.+ ++++++++++.| ++++..+ ......|.|.+ +.++|.
T Consensus 139 ~v~ff~~~~~---~~~~~f~~~A~~~~~~~~F~~~~~----~~~~~~~v~~~p-i~~~~~~~~~~~~~y~g~~~~~~~l~ 210 (382)
T 2r2j_A 139 IIGYFEQKDS---DNYRVFERVANILHDDCAFLSAFG----DVSKPERYSGDN-IIYKPPGHSAPDMVYLGAMTNFDVTY 210 (382)
T ss_dssp EEEEESCSSS---HHHHHHHHHHHHHTTTCEEEEEES----CC--------CE-EEEECSSSSSCCEECCSCTTCHHHHH
T ss_pred EEEEECCCCC---hhHHHHHHHHHHhhccceEEEEeh----hhHHhhCCCCCc-eEECCCCCCCcCcccCCCCCCHHHHH
Confidence 8999988654 457889999999999999988765 467889999889 5444431 23568899998 999999
Q ss_pred HHHHHHHhhcCCCCcceecCchhhhhhhcCCCCeEEEEecCCccchhhhchhHHHHHHHHHHHHhhcCcceEEEecCCCc
Q 014216 260 SFALEQLETNVAPPEVTELTSQDVMEEKCGSAAICFVSFLPDILDSKAEGRNKYLEMLLSVAEKFKRGHYSFVWAAAGKQ 339 (428)
Q Consensus 260 ~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~f~~id~~~~ 339 (428)
+|+..+. .|.+.+++..+..+.++.+.+++++++... ..+..+.+++.+.+++.+++++ +.|+++|+..+
T Consensus 211 ~fi~~~~-----~p~v~elt~~~~~~~~~~~~~~~v~f~~~~----~~~~~~~~~~~~~~~~~~~~~~-i~f~~id~~~~ 280 (382)
T 2r2j_A 211 NWIQDKC-----VPLVREITFENGEELTEEGLPFLILFHMKE----DTESLEIFQNEVARQLISEKGT-INFLHADCDKF 280 (382)
T ss_dssp HHHHHHH-----SCSSEECCHHHHHHHHTTCCCEEEEEECTT----CCHHHHHHHHHHHHHTGGGTTT-SEEEEEETTTT
T ss_pred HHHHhcc-----cCceEecChhhHHHHhcCCCcEEEEEecCC----chHHHHHHHHHHHHHHHHhCCe-eEEEEEchHHh
Confidence 9999995 699999999988877777777776665432 1234466777888888888887 99999999999
Q ss_pred hhHHHHhCCCCCCCceEEEEeccCCc-cccCCCCCCHHHHHHHHHHHhcCCCCCC-CCCCCCccc
Q 014216 340 PDLENRVGVGGYGYPALVALNVKKGV-YTPLKSAFELEHIVEFVKEAGRGGKGNL-PLDGTPSIV 402 (428)
Q Consensus 340 ~~~~~~~gl~~~~~P~~~i~~~~~~~-~~~~~~~~~~~~i~~fi~~~~~g~~~~~-~~~~~p~~~ 402 (428)
..++..||++..++|++++++...+. +..+.+.++.+.|.+|++++++|+.... +-+.+|+-.
T Consensus 281 ~~~~~~~gl~~~~~P~i~i~~~~~~y~~~~~~~~~~~~~i~~F~~d~~~Gkl~p~~kse~~P~~~ 345 (382)
T 2r2j_A 281 RHPLLHIQKTPADCPVIAIDSFRHMYVFGDFKDVLIPGKLKQFVFDLHSGKLHREFHHGPDPTDT 345 (382)
T ss_dssp HHHHHHTTCCGGGCSEEEEECSSCEEECCCSGGGGSTTHHHHHHHHHHHTTTSSCC---------
T ss_pred HHHHHHcCCCccCCCEEEEEcchhcCCCCccccccCHHHHHHHHHHHHCCCccccccCCCCCCCC
Confidence 99999999987779999988754331 2223456788999999999999986444 333355443
No 4
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=8.3e-38 Score=306.99 Aligned_cols=323 Identities=26% Similarity=0.456 Sum_probs=266.8
Q ss_pred CcEEeCccchHHHhhcCC---CeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEE
Q 014216 31 PVVQLTPNNFKSKVLNAN---GVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (428)
Q Consensus 31 ~~~~l~~~~~~~~~~~~~---~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~ 107 (428)
.+.+|+.++|++.+ .++ ++++|+||++||++|+++.|.|+++++.+++.+.++.|||++++++|++|+|+++||++
T Consensus 2 ~v~~l~~~~f~~~i-~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~ 80 (481)
T 3f8u_A 2 DVLELTDDNFESRI-SDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLK 80 (481)
T ss_dssp CCEEECTTTHHHHT-TCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEE
T ss_pred ceEEecHHHHHHHH-HhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEE
Confidence 57899999999544 556 89999999999999999999999999999998999999999999999999999999999
Q ss_pred EEeCCCCCccccCCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhhcCCeEEEEEEC
Q 014216 108 VFVPGKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLWIVEFFA 187 (428)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~ 187 (428)
+|++|+.+.+|.|.++.+.|.+|+.+.+ .+.+..+++....+.+...+..++|.|+.
T Consensus 81 ~~~~g~~~~~~~G~~~~~~l~~~~~~~~-----------------------~~~~~~i~~~~~~~~~~~~~~~~vv~~~~ 137 (481)
T 3f8u_A 81 IFRDGEEAGAYDGPRTADGIVSHLKKQA-----------------------GPASVPLRTEEEFKKFISDKDASIVGFFD 137 (481)
T ss_dssp EEETTEEEEECCSCSSHHHHHHHHHHHT-----------------------SCSEEEECSHHHHHHHTTSSSCEEEEEES
T ss_pred EEeCCceeeeecCccCHHHHHHHHHhhc-----------------------ccCceecCCHHHHHHHHhcCCcEEEEEEC
Confidence 9999977889999999999999999884 67788886544444445677888999998
Q ss_pred CCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEc------CCCCCccccc-CCCCHHHHHH
Q 014216 188 PWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFG------ADKDSPIPYE-GARTAGAIES 260 (428)
Q Consensus 188 ~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~------~~~~~~~~y~-g~~~~~~i~~ 260 (428)
++| ......|.++|..+++.+.|+.+ .+.++++++++... .+++|+ ..++....|. |..+.+.|.+
T Consensus 138 ~~~---~~~~~~f~~~a~~~~~~~~F~~~---~~~~~~~~~~v~~~-~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~ 210 (481)
T 3f8u_A 138 DSF---SEAHSEFLKAASNLRDNYRFAHT---NVESLVNEYDDNGE-GIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKK 210 (481)
T ss_dssp CTT---CHHHHHHHHHHHHHTTTSCEEEE---CCHHHHHHHCSSSE-EEEEECCGGGCBTTBCSEEECCCSSCCHHHHHH
T ss_pred CCc---cchHHHHHHHHHHhccCceEEEE---CCHHHHHHhCCCCC-cEEEEecccccCccCCcccccCCCCCCHHHHHH
Confidence 865 56788999999999999999986 56789999999974 488887 3345678888 8899999999
Q ss_pred HHHHHHhhcCCCCcceecCchhhhhhhcCCCCeEEEEecCCccchhhhchhHHHHHHHHHHHHhhcCc--ceEEEecCCC
Q 014216 261 FALEQLETNVAPPEVTELTSQDVMEEKCGSAAICFVSFLPDILDSKAEGRNKYLEMLLSVAEKFKRGH--YSFVWAAAGK 338 (428)
Q Consensus 261 fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~--~~f~~id~~~ 338 (428)
||..+ ..|.+.+++..+..... ..+++++++..+ ........+.+++.++++|++|+++. +.|+++|...
T Consensus 211 fi~~~-----~~p~v~e~t~~n~~~~~--~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~ 282 (481)
T 3f8u_A 211 FIQEN-----IFGICPHMTEDNKDLIQ--GKDLLIAYYDVD-YEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKT 282 (481)
T ss_dssp HHHHH-----TTTTSCEECTTTHHHHT--TSSEEEEEECCC-TTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTT
T ss_pred HHHHh-----CCCCccccChhHHHHhc--CCCceEEEEecc-cccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHH
Confidence 99999 57999999988765543 344544444322 12223334557889999999999874 9999999999
Q ss_pred chhHHHHhCCCC--CCCceEEEEeccCCccccCCCCCCHH--HHHHHHHHHhcCCCCCC
Q 014216 339 QPDLENRVGVGG--YGYPALVALNVKKGVYTPLKSAFELE--HIVEFVKEAGRGGKGNL 393 (428)
Q Consensus 339 ~~~~~~~~gl~~--~~~P~~~i~~~~~~~~~~~~~~~~~~--~i~~fi~~~~~g~~~~~ 393 (428)
+...++.||++. ...|.+++++.++.+| .+.++++.+ .|.+|++++++|+....
T Consensus 283 ~~~~l~~~gl~~~~~~~P~~~i~~~~~~ky-~~~~~~t~e~~~l~~f~~~~~~g~~~~~ 340 (481)
T 3f8u_A 283 FSHELSDFGLESTAGEIPVVAIRTAKGEKF-VMQEEFSRDGKALERFLQDYFDGNLKRY 340 (481)
T ss_dssp THHHHGGGTCCCCTTCSCEEEEECSSSCEE-ECCSCCCTTSHHHHHHHHHHHHTCCCCC
T ss_pred HHHHHHHcCCCcccCCCcEEEEEcCCCccc-CCCcccCccHHHHHHHHHHHhcCCcccc
Confidence 999999999983 3699999998444445 677889999 99999999999976544
No 5
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=7.1e-38 Score=324.84 Aligned_cols=319 Identities=27% Similarity=0.464 Sum_probs=274.7
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEE
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~ 109 (428)
..+.+++.++|.. . .+++++|.||++||++|+++.|.|.++++.+++++.|+.|||++++.+|++|||.++|+++++
T Consensus 440 ~~v~~l~~~~~~~-~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 516 (780)
T 3apo_A 440 SHVTTLGPQNFPA-S--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVF 516 (780)
T ss_dssp SCEEECCTTTSCT-T--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CCCEecCHHHHHH-c--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcCCeEEEE
Confidence 3578899998883 3 789999999999999999999999999999998999999999999999999999999999999
Q ss_pred eCCCCCccccCCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhhc--CCeEEEEEEC
Q 014216 110 VPGKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKS--KDLWIVEFFA 187 (428)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~--~~~~~v~f~~ 187 (428)
.+|+. ..|.|.++.+.|.+|+.+.+ .+++..++.+++.+.+... +..++|.||+
T Consensus 517 ~~g~~-~~~~g~~~~~~l~~fi~~~~-----------------------~~~v~~l~~~~f~~~v~~~~~~~~~lv~F~a 572 (780)
T 3apo_A 517 NQSSI-HEYEGHHSAEQILEFIEDLR-----------------------NPSVVSLTPSTFNELVKQRKHDEVWMVDFYS 572 (780)
T ss_dssp ETTEE-EEECSCSCHHHHHHHHHHHH-----------------------SCSEEECCHHHHHHHTTTCCTTCCEEEEEEC
T ss_pred cCCce-eeecCcccHHHHHHHHHhhc-----------------------ccceeecCcccHHHHhhccCCCCeEEEEEEC
Confidence 88765 78999999999999999885 4679999999999887543 4578999999
Q ss_pred CCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCC---CcccccC-CCCHHHHHHHHH
Q 014216 188 PWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKD---SPIPYEG-ARTAGAIESFAL 263 (428)
Q Consensus 188 ~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~---~~~~y~g-~~~~~~i~~fi~ 263 (428)
+||++|+.+.+.|.++|+.+++.+.|+.+||+.+..+|++++|+++|++++|+.+.. .+..|.| ..+.++|.+|+.
T Consensus 573 p~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~ 652 (780)
T 3apo_A 573 PWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGL 652 (780)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHH
T ss_pred CCCHHHHHhhHHHHHHHHHhhCCeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999976543 3677899 899999999998
Q ss_pred HHHhhcCCCCcceecCchhhhhhhcCCCCeEEEEecCCccchhhhchhHHHHHHHHHHHHhhcCcceEEEecCCCchhHH
Q 014216 264 EQLETNVAPPEVTELTSQDVMEEKCGSAAICFVSFLPDILDSKAEGRNKYLEMLLSVAEKFKRGHYSFVWAAAGKQPDLE 343 (428)
Q Consensus 264 ~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~f~~id~~~~~~~~ 343 (428)
+.+ .+.+..++..++.+......++++|.|+..|+... ..+...+.++|..++++ +.|+.+|...++.++
T Consensus 653 ~~~-----~~~v~~l~~~~~~~~~~~~~~~v~v~F~a~wC~~C----~~~~p~~~~la~~~~~~-~~~~~vd~~~~~~~~ 722 (780)
T 3apo_A 653 GFL-----PQASIDLTPQTFNEKVLQGKTHWVVDFYAPWSGPS----QNFAPEFELLARMIKGK-VRAGKVDCQAYPQTC 722 (780)
T ss_dssp TTS-----CCCSEEECHHHHHHHTTTCSSCEEEEEECTTCHHH----HHHHHHHHHHHHHHTTT-CEEEEEETTTCHHHH
T ss_pred hhc-----ccccccCCHHHHHHHHhcCCCeEEEEEECCCCHHH----HHHHHHHHHHHHHhcCC-ceEEEEECCCCHHHH
Confidence 874 56788888777666566667788888887765433 34667889999999887 999999999999999
Q ss_pred HHhCCCCCCCceEEEEeccCCccccCC----CCCCHHHHHHHHHHHhcC
Q 014216 344 NRVGVGGYGYPALVALNVKKGVYTPLK----SAFELEHIVEFVKEAGRG 388 (428)
Q Consensus 344 ~~~gl~~~~~P~~~i~~~~~~~~~~~~----~~~~~~~i~~fi~~~~~g 388 (428)
+.||+.. +|++++++. ++....+. |..+.+.|.+||.+.+..
T Consensus 723 ~~~~v~~--~Pt~~~~~~-g~~~~~~~G~~~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 723 QKAGIKA--YPSVKLYQY-ERAKKSIWEEQINSRDAKTIAALIYGKLET 768 (780)
T ss_dssp HHTTCCS--SSEEEEEEE-ETTTTEEEEEEECCCCHHHHHHHHHHHTTC
T ss_pred HhcCCCc--CCEEEEEcC-CCccccccCcccCCcCHHHHHHHHHHHHHH
Confidence 9999986 999999843 32222233 368999999999999854
No 6
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=6.5e-36 Score=295.00 Aligned_cols=315 Identities=23% Similarity=0.373 Sum_probs=259.4
Q ss_pred cccCCCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcccHhHHHHcCCcc
Q 014216 24 ALYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANEHQSLAQEYGIRG 102 (428)
Q Consensus 24 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~ 102 (428)
........+..++.++|+. ++.++++++|+||++||++|+++.|.|.++++.+++. +.|+.|||++++.+|++|+|++
T Consensus 8 ~~~~~~~~v~~l~~~~f~~-~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 86 (504)
T 2b5e_A 8 AVAPEDSAVVKLATDSFNE-YIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPG 86 (504)
T ss_dssp SSCCTTSSCEECCTTTHHH-HHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCS
T ss_pred CCCCCCCCcEECCHHHHHH-HHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCc
Confidence 3445567899999999994 5678899999999999999999999999999999985 9999999999999999999999
Q ss_pred ccEEEEEeCCCC--CccccCCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhhcCC-
Q 014216 103 FPTIKVFVPGKP--PVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKD- 179 (428)
Q Consensus 103 ~P~~~~~~~g~~--~~~~~g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~- 179 (428)
+||+++|++|+. +.+|.|.++.+.|.+|+.+.+ .+.+..+++ +..++. .+.
T Consensus 87 ~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~-----------------------~~~v~~i~~--~~~~~~-~~~~ 140 (504)
T 2b5e_A 87 FPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQS-----------------------QPAVAVVAD--LPAYLA-NETF 140 (504)
T ss_dssp SSEEEEEETTCTTCEEECCSCCSHHHHHHHHHHHT-----------------------SCSEEECSC--HHHHHH-HSCC
T ss_pred CCEEEEEeCCccccceeecCCCCHHHHHHHHHHhc-----------------------CCcceeHHH--HHHHHh-cCCC
Confidence 999999999987 789999999999999999884 677888887 666654 444
Q ss_pred -eEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCC-C---C
Q 014216 180 -LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGA-R---T 254 (428)
Q Consensus 180 -~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~-~---~ 254 (428)
..+|.|+.+.. ......|.++|..+++.+.|+.++ ++++++++. +++|+..+ .+..|.|. + +
T Consensus 141 ~~~~v~~f~~~~---~~~~~~f~~~A~~~~~~~~F~~~~-----~~~~~~~~~----i~l~~~~~-~~~~~~g~~~~~~~ 207 (504)
T 2b5e_A 141 VTPVIVQSGKID---ADFNATFYSMANKHFNDYDFVSAE-----NADDDFKLS----IYLPSAMD-EPVVYNGKKADIAD 207 (504)
T ss_dssp SSCEEEEEESCC---HHHHHHHHHHHHHTTTTCEEEEEE-----CTTSCCEEE----EEETTEEE-EEEECCSCHHHHTS
T ss_pred ceEEEEEeCCCC---chHHHHHHHHHHHhhcCcEEEEEH-----HHHHhcCCe----EEecCCCC-cccccCCcccccCC
Confidence 56666666533 557889999999999999999886 577888876 77776544 57789998 6 8
Q ss_pred HHHHHHHHHHHHhhcCCCCcceecCchhhhhhhcCCCCeEEEEecCCccchhhhchhHHHHHHHHHHHHhhcCcceEEEe
Q 014216 255 AGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSAAICFVSFLPDILDSKAEGRNKYLEMLLSVAEKFKRGHYSFVWA 334 (428)
Q Consensus 255 ~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~f~~i 334 (428)
.+.|.+||..+ ..|.+.+++..+.......+..+ +++|+.. .+..+.++..++++|++|+++ +.|+++
T Consensus 208 ~~~l~~fi~~~-----~~p~v~~~t~~~~~~~~~~~~~~-~~l~~~~-----~~~~~~~~~~l~~~a~~~~~~-i~F~~i 275 (504)
T 2b5e_A 208 ADVFEKWLQVE-----ALPYFGEIDGSVFAQYVESGLPL-GYLFYND-----EEELEEYKPLFTELAKKNRGL-MNFVSI 275 (504)
T ss_dssp HHHHHHHHHHH-----SSCSSCBCCHHHHHHHHHTTSCE-EEEEESS-----HHHHHHHHHHHHHHHHHTTTT-CEEEEE
T ss_pred HHHHHHHHHhc-----ccCCcccCCHhHHHHHhcCCCcE-EEEEecC-----cccHHHHHHHHHHHHHhcCCe-eEEEEE
Confidence 99999999988 57999999988765544334333 4444432 122367899999999999998 999999
Q ss_pred cCCCchhHHHHhCCCCCCCceEEEEeccCCccccCC--CC-----------CCHHHHHHHHHHHhcCCCC
Q 014216 335 AAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLK--SA-----------FELEHIVEFVKEAGRGGKG 391 (428)
Q Consensus 335 d~~~~~~~~~~~gl~~~~~P~~~i~~~~~~~~~~~~--~~-----------~~~~~i~~fi~~~~~g~~~ 391 (428)
|+..++.+++.||+ ....|++++++...+..+.+. ++ ++.+.|.+|+.+++.|+..
T Consensus 276 d~~~~~~~~~~~gl-~~~~P~v~i~~~~~~~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~ 344 (504)
T 2b5e_A 276 DARKFGRHAGNLNM-KEQFPLFAIHDMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDAS 344 (504)
T ss_dssp EHHHHTTHHHHTTC-CSCSSEEEEEETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCC
T ss_pred ehhhhHHHHHHcCC-cccCCEEEEEeCCcCcccCCCCCccchhhccccccccCHHHHHHHHHHHHcCCCC
Confidence 99888899999999 668999999998554433454 55 8999999999999999753
No 7
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=2e-34 Score=298.96 Aligned_cols=343 Identities=23% Similarity=0.457 Sum_probs=262.9
Q ss_pred ccCCCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCcccc
Q 014216 25 LYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFP 104 (428)
Q Consensus 25 ~~~~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 104 (428)
.+.....+..++.++|+. ++.++++++|+||++||++|+++.|.|+++++.+.+.+.++.|||++++++|++|+|+++|
T Consensus 111 ~~~~~~~v~~l~~~~f~~-~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 189 (780)
T 3apo_A 111 IYDDDPEIITLERREFDA-AVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYP 189 (780)
T ss_dssp TTTTCTTEEECCHHHHHH-HHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCSSCC--------C
T ss_pred ccCCCcceeeechHhHHh-hhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEEeCCCcHHHHHHcCCceee
Confidence 444567899999999995 4578999999999999999999999999999999988999999999999999999999999
Q ss_pred EEEEEeCCCCCccccCCCCcchHHHHHHHHHHH------------HHHHhh-----------cCCCC-------------
Q 014216 105 TIKVFVPGKPPVDYQGARDVKPIAEFALQQIKA------------LLKERL-----------SGKAT------------- 148 (428)
Q Consensus 105 ~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l~~------------~~~~~~-----------~~~~~------------- 148 (428)
|+++|++|+.+.+|.|.++.+.|.+|+.+.+.. .+...+ .....
T Consensus 190 t~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~vi~f~~~~~~~~~~~~~~~l~~~ 269 (780)
T 3apo_A 190 SLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETAFAAGVGWLITFCSKGEDCLTSQTRLRLSGM 269 (780)
T ss_dssp EEEEECTTSCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHHHHHTCEEEEEEECTTSCCCCHHHHHHHHHH
T ss_pred eEEEEeCCcEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhhhccCCCEEEEEecCcccccCHHHHHHHHHH
Confidence 999999998889999999999999999654321 111110 00000
Q ss_pred ---------------------------------CCC-------C------------------------------------
Q 014216 149 ---------------------------------GGS-------S------------------------------------ 152 (428)
Q Consensus 149 ---------------------------------~~~-------~------------------------------------ 152 (428)
... .
T Consensus 270 f~~~~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~~~y~g~~~~~~i~~~i~~~~p~v~~it~~~f~~~~ 349 (780)
T 3apo_A 270 LDGLVNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNLPDFELLSANQLEDRL 349 (780)
T ss_dssp TTTTEEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGGSEEECCCCHHHHHHHHHHHSCCCCEECHHHHHHHH
T ss_pred hhccceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccceeccccccHHHHHHHHHHhCCCcccCCHHHHHHHh
Confidence 000 0
Q ss_pred -------------------------------CC----------------------C------C-C---------------
Q 014216 153 -------------------------------DK----------------------S------K-S--------------- 157 (428)
Q Consensus 153 -------------------------------~~----------------------~------~-~--------------- 157 (428)
.. + . .
T Consensus 350 ~~~~~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~~~~~~p~i~l~~~~~~e~~~~~~g~~~~~~ 429 (780)
T 3apo_A 350 AHHRWLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSDLYVFQPSLAVFKGQGTKEYEIHHGKKILYD 429 (780)
T ss_dssp TTSEEEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHHTTCCSCEEEEEESSTTSSEEECCSCCCHHH
T ss_pred ccCCeEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCchhhHhhccccCChhhhccCCCcceeeecccHhhHHH
Confidence 00 0 0 0
Q ss_pred --------CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcC
Q 014216 158 --------DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFN 229 (428)
Q Consensus 158 --------~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~ 229 (428)
..+.+..++.+++.+. .+++++|.||++||++|+.+.+.|.++|+.+++.+.|+.||++.+..++++||
T Consensus 430 i~~f~~~~~~~~v~~l~~~~~~~~---~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~ 506 (780)
T 3apo_A 430 ILAFAKESVNSHVTTLGPQNFPAS---DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYN 506 (780)
T ss_dssp HHHHHHHHHTSCEEECCTTTSCTT---CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTT
T ss_pred HHHHhhhccCCCCEecCHHHHHHc---CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcC
Confidence 0012333444333332 35689999999999999999999999999999899999999999999999999
Q ss_pred CCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhhcCCCCcceecCchhhhhhhcCC---CCeEEEEecCCccchh
Q 014216 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGS---AAICFVSFLPDILDSK 306 (428)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~---~~~~vi~f~~~~~~~~ 306 (428)
|+++|++++++.+ ....|.|..+.++|.+|+.+.+. +.|..++..+ ++.+... ....++.|...++..
T Consensus 507 v~~~Pt~~~~~~g--~~~~~~g~~~~~~l~~fi~~~~~-----~~v~~l~~~~-f~~~v~~~~~~~~~lv~F~ap~C~~- 577 (780)
T 3apo_A 507 IQAYPTTVVFNQS--SIHEYEGHHSAEQILEFIEDLRN-----PSVVSLTPST-FNELVKQRKHDEVWMVDFYSPWSHP- 577 (780)
T ss_dssp CCSSSEEEEEETT--EEEEECSCSCHHHHHHHHHHHHS-----CSEEECCHHH-HHHHTTTCCTTCCEEEEEECTTCHH-
T ss_pred CCcCCeEEEEcCC--ceeeecCcccHHHHHHHHHhhcc-----cceeecCccc-HHHHhhccCCCCeEEEEEECCCCHH-
Confidence 9999999999643 34788999999999999999873 6788888654 4444432 345666776554432
Q ss_pred hhchhHHHHHHHHHHHHhhcCcceEEEecCCCchhHHHHhCCCCCCCceEEEEeccCC---ccccCCC-CCCHHHHHHHH
Q 014216 307 AEGRNKYLEMLLSVAEKFKRGHYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKG---VYTPLKS-AFELEHIVEFV 382 (428)
Q Consensus 307 ~~~~~~~~~~~~~~a~~~~~~~~~f~~id~~~~~~~~~~~gl~~~~~P~~~i~~~~~~---~~~~~~~-~~~~~~i~~fi 382 (428)
-+.+...+.++|..+++. +.|+.+|+..+..+++.+|+.. +|++++++.... .+..|.| ..+.++|.+||
T Consensus 578 ---c~~~~p~~~~lA~~~~~~-v~~~~vd~~~~~~l~~~~~v~~--~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi 651 (780)
T 3apo_A 578 ---SQVLMPEWKRMARTLTGL-INVGSVDCGQYHSFCTQENVQR--YPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWG 651 (780)
T ss_dssp ---HHHHHHHHHHHHHHHTTT-SEEEEEETTTTHHHHHHTTCCS--SSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHH
T ss_pred ---HHHhhHHHHHHHHHhhCC-eEEEEEECcchHHHHHHcCCCC--CCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHH
Confidence 235778999999999987 9999999999999999999986 999999986543 3667888 89999999999
Q ss_pred HHHh
Q 014216 383 KEAG 386 (428)
Q Consensus 383 ~~~~ 386 (428)
.+..
T Consensus 652 ~~~~ 655 (780)
T 3apo_A 652 LGFL 655 (780)
T ss_dssp HTTS
T ss_pred hhhc
Confidence 9875
No 8
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=100.00 E-value=1e-34 Score=258.92 Aligned_cols=219 Identities=38% Similarity=0.764 Sum_probs=193.6
Q ss_pred CCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc---eEEEEEcCcccHhHHHHcCCcccc
Q 014216 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV---ATVAALDANEHQSLAQEYGIRGFP 104 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---v~~~~vd~~~~~~l~~~~~v~~~P 104 (428)
....+..++.++|+ .+..++++++|+||++||++|+++.|.|.++++.+++. +.++.|||++++++|++|+|+++|
T Consensus 13 ~~~~v~~l~~~~~~-~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 91 (241)
T 3idv_A 13 EENGVLVLNDANFD-NFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYP 91 (241)
T ss_dssp EETTEEEECTTTHH-HHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSS
T ss_pred cCCCcEEecccCHH-HHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCC
Confidence 35679999999999 56677899999999999999999999999999999875 999999999999999999999999
Q ss_pred EEEEEeCCCCCccccCCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhhcCCeEEEE
Q 014216 105 TIKVFVPGKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLWIVE 184 (428)
Q Consensus 105 ~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~v~ 184 (428)
++++|++|+.+ +|.|.++.+.+.+|+.+.+.. ........+..++.+++...+ ..+++++|.
T Consensus 92 t~~~~~~g~~~-~~~g~~~~~~l~~~i~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~ 153 (241)
T 3idv_A 92 TIKILKKGQAV-DYEGSRTQEEIVAKVREVSQP----------------DWTPPPEVTLVLTKENFDEVV-NDADIILVE 153 (241)
T ss_dssp EEEEEETTEEE-ECCSCSCHHHHHHHHHHHHST----------------TCCCCCCSSEECCTTTHHHHH-HHCSEEEEE
T ss_pred EEEEEcCCCcc-cccCcccHHHHHHHHhhccCc----------------ccccccccceeccHHHHHHhh-ccCCeEEEE
Confidence 99999988754 799999999999999887521 011134568889999999876 567899999
Q ss_pred EECCCChhHhhHHHHHHHHHHHhcCC---eEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHH
Q 014216 185 FFAPWCGHCKKLAPEWKKAANNLKGK---VKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESF 261 (428)
Q Consensus 185 f~~~~c~~c~~~~~~~~~~a~~~~~~---~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~f 261 (428)
||++||++|+.+.+.|.++++.+.+. +.|+.||++.+++++++|+|+++|++++|+++. .+.|.|..+.+.|.+|
T Consensus 154 f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~--~~~~~g~~~~~~l~~~ 231 (241)
T 3idv_A 154 FYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGR--PYDYNGPREKYGIVDY 231 (241)
T ss_dssp EECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTE--EEECCSCCSHHHHHHH
T ss_pred EECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCe--EEEecCCCCHHHHHHH
Confidence 99999999999999999999999764 999999999999999999999999999998543 5669999999999999
Q ss_pred HHHHHh
Q 014216 262 ALEQLE 267 (428)
Q Consensus 262 i~~~~~ 267 (428)
+.+++.
T Consensus 232 l~~~~~ 237 (241)
T 3idv_A 232 MIEQSG 237 (241)
T ss_dssp HHHHTT
T ss_pred HHhhhC
Confidence 998863
No 9
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.97 E-value=1.2e-29 Score=239.76 Aligned_cols=226 Identities=23% Similarity=0.443 Sum_probs=189.6
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCc--ccHhHHHHcCCcc--ccE
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN--EHQSLAQEYGIRG--FPT 105 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~--~P~ 105 (428)
..+.+++.+++...+....++++|+||++||++|+++.+.|.++++.+++++.|+.+||+ +++.+|+.|||.+ +|+
T Consensus 117 p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~ 196 (361)
T 3uem_A 117 PLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPA 196 (361)
T ss_dssp CSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSE
T ss_pred CcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCcc
Confidence 347788999998443333567899999999999999999999999999999999999999 7899999999998 999
Q ss_pred EEEEeCCCCCcccc---CCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--C-CCCCCcEEeCccchHHHHhhcCC
Q 014216 106 IKVFVPGKPPVDYQ---GARDVKPIAEFALQQIKALLKERLSGKATGGSSDKS--K-SDSNESIELNSSNFDELVLKSKD 179 (428)
Q Consensus 106 ~~~~~~g~~~~~~~---g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~--~-~~~~~v~~l~~~~~~~~~~~~~~ 179 (428)
++++..|+....|. |..+.+.|.+|+.+.+. ++..+...+.+ . .....+..++..++...+...++
T Consensus 197 ~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~--------g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k 268 (361)
T 3uem_A 197 VRLITLEEEMTKYKPESEELTAERITEFCHRFLE--------GKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKK 268 (361)
T ss_dssp EEEEECC--CCEECCSSCCCCHHHHHHHHHHHHT--------TCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTC
T ss_pred EEEEEcCCcccccCCCccccCHHHHHHHHHHHhc--------CCCcccccCCCCCcccccCCcEEeecCchhhhcccCCC
Confidence 99998866556775 78999999999988753 33322211111 1 14467999999999998877888
Q ss_pred eEEEEEECCCChhHhhHHHHHHHHHHHhcCC--eEEEEEeCCCchhHhhhcCCCcCcEEEEEcCC-CCCcccccCCCCHH
Q 014216 180 LWIVEFFAPWCGHCKKLAPEWKKAANNLKGK--VKLGHVDCDSEKSLMSKFNVQGFPTILVFGAD-KDSPIPYEGARTAG 256 (428)
Q Consensus 180 ~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~--~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~-~~~~~~y~g~~~~~ 256 (428)
+++|.||++||++|+.+.+.|.++++.+.+. +.|+.+|++.+. +++|+|.++|++++|..+ +..+..|.|..+.+
T Consensus 269 ~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~ 346 (361)
T 3uem_A 269 NVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKVHSFPTLKFFPASADRTVIDYNGERTLD 346 (361)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCCCCSSSEEEEECSSSSCCCEECCSCSSHH
T ss_pred cEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcCCcccCeEEEEECCCCcceeEecCCCCHH
Confidence 9999999999999999999999999999875 999999998776 789999999999999655 45689999999999
Q ss_pred HHHHHHHHH
Q 014216 257 AIESFALEQ 265 (428)
Q Consensus 257 ~i~~fi~~~ 265 (428)
.|.+|+.++
T Consensus 347 ~l~~~l~~~ 355 (361)
T 3uem_A 347 GFKKFLESG 355 (361)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHhc
Confidence 999998776
No 10
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.97 E-value=5.4e-30 Score=225.91 Aligned_cols=196 Identities=21% Similarity=0.287 Sum_probs=167.5
Q ss_pred CCCeEEEEEECC-CChhhhhhhHHHHHHHHHhcCceEEEEEcCcc--cHhHHHHcCCccccEEEEEeCCCC-CccccCCC
Q 014216 47 ANGVVLVEFYAP-WCGHCQALTPIWEKAATVLKGVATVAALDANE--HQSLAQEYGIRGFPTIKVFVPGKP-PVDYQGAR 122 (428)
Q Consensus 47 ~~~~~lv~f~~~-~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~P~~~~~~~g~~-~~~~~g~~ 122 (428)
++..++++||++ ||++|+++.|.|+++++. .+++.|+.|||++ ++++|++|||.++|++++|++|+. ..+|.|..
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~ 99 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLP 99 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTBCCSEEEESCC
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCceeeEEEeccC
Confidence 356788999999 999999999999999865 5679999999999 999999999999999999998876 37899999
Q ss_pred CcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhhcCCeE-EEEEECCCChhHhhHHHHHH
Q 014216 123 DVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLW-IVEFFAPWCGHCKKLAPEWK 201 (428)
Q Consensus 123 ~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~-~v~f~~~~c~~c~~~~~~~~ 201 (428)
+.+.+..|+...+.. ......++.+.+.... ..++++ +|.||++||++|+.+.+.|.
T Consensus 100 ~~~~l~~~l~~~l~~---------------------~~~~~~l~~~~~~~~~-~~~~~~~~v~F~a~wC~~C~~~~p~~~ 157 (226)
T 1a8l_A 100 AGHEFAAFLEDIVDV---------------------SREETNLMDETKQAIR-NIDQDVRILVFVTPTCPYCPLAVRMAH 157 (226)
T ss_dssp CTTHHHHHHHHHHHH---------------------HHTCCCCCHHHHHHHT-TCCSCEEEEEEECSSCTTHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhh---------------------cCCCCCCCHHHHHHHH-hcCCCcEEEEEeCCCCCccHHHHHHHH
Confidence 999999999876531 1123456666666553 444555 99999999999999999999
Q ss_pred HHHHHhc----CCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 202 KAANNLK----GKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 202 ~~a~~~~----~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
++++.+. +.+.|+.||++.+.+++++|+|.++|++++|+.+ .....|.|..+.+.|.+|+.+.+
T Consensus 158 ~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 158 KFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNG-EDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETT-EEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCC-ceeEEEcCCCCHHHHHHHHHHhh
Confidence 9999997 5899999999999999999999999999999744 45678899999999999998764
No 11
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.97 E-value=1.9e-29 Score=222.77 Aligned_cols=196 Identities=17% Similarity=0.233 Sum_probs=167.2
Q ss_pred cCCCeEEEEEE-----CCCChhhhhhhHHHHHHHHHh--cCceEEEEEcCcccHhHHHHcCCccccEEEEEeCCCCCccc
Q 014216 46 NANGVVLVEFY-----APWCGHCQALTPIWEKAATVL--KGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDY 118 (428)
Q Consensus 46 ~~~~~~lv~f~-----~~~C~~C~~~~~~~~~~~~~~--~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~g~~~~~~ 118 (428)
+..++++|.|| ++||++|+.+.|.|.+++..+ .+++.++.|||++++++|++|+|+++||+++|++|+...+|
T Consensus 18 ~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~~~~~~~~ 97 (229)
T 2ywm_A 18 EFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIEGDKDYGIRY 97 (229)
T ss_dssp HCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEESSSCCCEEE
T ss_pred hccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEECCCccccee
Confidence 44566666666 899999999999999998888 67899999999999999999999999999999877778899
Q ss_pred cCCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHH
Q 014216 119 QGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAP 198 (428)
Q Consensus 119 ~g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~ 198 (428)
.|.++.+.+..|+...+.. ...+..++.+.+..........+++.||++||++|+.+.+
T Consensus 98 ~G~~~~~~l~~~~~~~~~~---------------------~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~ 156 (229)
T 2ywm_A 98 IGLPAGLEFTTLINGIFHV---------------------SQRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAV 156 (229)
T ss_dssp ESCCCTTHHHHHHHHHHHH---------------------HTTCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHH
T ss_pred cCCccHHHHHHHHHHHHhc---------------------cCCccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHH
Confidence 9999999999999876531 2235667888887765323334588999999999999999
Q ss_pred HHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 199 EWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 199 ~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
.|.+++..+ +.+.|+.||++.+++++++|+|.++|++++ +++ ...|.|..+.+.|.+|+.+.+.
T Consensus 157 ~~~~~~~~~-~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~---~G~-~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 157 MAWDFALAN-DYITSKVIDASENQDLAEQFQVVGVPKIVI---NKG-VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp HHHHHHHHC-TTEEEEEEEGGGCHHHHHHTTCCSSSEEEE---GGG-TEEEESCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHC-CCeEEEEEECCCCHHHHHHcCCcccCEEEE---CCE-EEEeeCCCCHHHHHHHHHHHhh
Confidence 999999998 589999999999999999999999999998 333 5668999999999999988764
No 12
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.96 E-value=5e-27 Score=221.73 Aligned_cols=317 Identities=14% Similarity=0.223 Sum_probs=254.1
Q ss_pred CCCcEEeCc-cchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEE
Q 014216 29 SSPVVQLTP-NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (428)
Q Consensus 29 ~~~~~~l~~-~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~ 107 (428)
+..+..+++ ++++ .+++.+..++|.|+.+.+..+ ...+.+++..+ +.+.|+.+ .+.++|+++++.. |+++
T Consensus 16 ~~~~~~l~~~~~~~-~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~-~~~~F~~t---~~~~v~~~~~v~~-~~i~ 86 (361)
T 3uem_A 16 SEFATTLPDGAAAE-SLVESSEVAVIGFFKDVESDS---AKQFLQAAEAI-DDIPFGIT---SNSDVFSKYQLDK-DGVV 86 (361)
T ss_dssp CSSSEECCSHHHHH-HHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHC-SSSCEEEE---CCHHHHHHTTCSS-SEEE
T ss_pred cccceecCCHHHHH-HHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcC-CCceEEEE---CcHHHHHHhCCCC-CeEE
Confidence 445677765 5566 667788999999998776655 46888899888 55788644 4689999999988 9999
Q ss_pred EEeC-CCCCccccCCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhhcCCeEEEEEE
Q 014216 108 VFVP-GKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLWIVEFF 186 (428)
Q Consensus 108 ~~~~-g~~~~~~~g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~v~f~ 186 (428)
+|+. ......|.|..+.+.|.+|+... ..+.+.+++.+++...+.....+++++|+
T Consensus 87 lfk~f~~~~~~~~g~~~~~~i~~fi~~~-----------------------~~p~v~~~~~~~~~~~~~~~~~~~~v~F~ 143 (361)
T 3uem_A 87 LFKKFDEGRNNFEGEVTKENLLDFIKHN-----------------------QLPLVIEFTEQTAPKIFGGEIKTHILLFL 143 (361)
T ss_dssp EEESSTTSEEECCSCCCHHHHHHHHHHH-----------------------SSCSEEECSTTTHHHHHSCSCCEEEEEEC
T ss_pred EEEecCCCccccCCcCCHHHHHHHHHHc-----------------------CCCcceecCcccHHHHhcCCCCcEEEEEE
Confidence 9976 23357889999999999999987 57889999999999887555668899999
Q ss_pred CCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC--CchhHhhhcCCCc--CcEEEEEcCCCCCccccc---CCCCHHHHH
Q 014216 187 APWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD--SEKSLMSKFNVQG--FPTILVFGADKDSPIPYE---GARTAGAIE 259 (428)
Q Consensus 187 ~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~--~~~~~~~~~~v~~--~P~i~~~~~~~~~~~~y~---g~~~~~~i~ 259 (428)
++||++|+.+.+.|.++|+.+++++.|+.+||+ ....+++.||++. +|+++++..++ ....|. |..+.+.|.
T Consensus 144 ~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~-~~~ky~~~~~~~~~~~l~ 222 (361)
T 3uem_A 144 PKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEE-EMTKYKPESEELTAERIT 222 (361)
T ss_dssp CSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC---CCEECCSSCCCCHHHHH
T ss_pred eCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCC-cccccCCCccccCHHHHH
Confidence 999999999999999999999999999999998 6789999999987 99999998643 345554 789999999
Q ss_pred HHHHHHHhhcCC-------------CCcceecCchhhhhhhcCCCCeEEEEecCCccchhhhchhHHHHHHHHHHHHhhc
Q 014216 260 SFALEQLETNVA-------------PPEVTELTSQDVMEEKCGSAAICFVSFLPDILDSKAEGRNKYLEMLLSVAEKFKR 326 (428)
Q Consensus 260 ~fi~~~~~~~~~-------------~~~v~~l~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 326 (428)
+|+.+.+..... ...+..++..++........+..+|.|+..|+... ..+...+.++|..|++
T Consensus 223 ~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C----~~~~p~~~~la~~~~~ 298 (361)
T 3uem_A 223 EFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHC----KQLAPIWDKLGETYKD 298 (361)
T ss_dssp HHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHH----HHHHHHHHHHHHHTTT
T ss_pred HHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhH----HHHHHHHHHHHHHhcc
Confidence 999998764321 12366676666655554567788888887776443 3577899999999987
Q ss_pred C-cceEEEecCCCchhHHHHhCCCCCCCceEEEEecc-CCccccCCCCCCHHHHHHHHHHHh
Q 014216 327 G-HYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVK-KGVYTPLKSAFELEHIVEFVKEAG 386 (428)
Q Consensus 327 ~-~~~f~~id~~~~~~~~~~~gl~~~~~P~~~i~~~~-~~~~~~~~~~~~~~~i~~fi~~~~ 386 (428)
+ .+.|+.+|...+. +..|++.. +|++++++.. +.....|.|..+.+.|.+||++..
T Consensus 299 ~~~v~~~~vd~~~~~--~~~~~v~~--~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 299 HENIVIAKMDSTANE--VEAVKVHS--FPTLKFFPASADRTVIDYNGERTLDGFKKFLESGG 356 (361)
T ss_dssp CSSEEEEEEETTTCB--CSSCCCCS--SSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTTS
T ss_pred CCcEEEEEEECCccc--hhhcCCcc--cCeEEEEECCCCcceeEecCCCCHHHHHHHHHhcC
Confidence 5 4999999987666 67889886 9999999655 345678899999999999998764
No 13
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.3e-28 Score=222.07 Aligned_cols=230 Identities=32% Similarity=0.561 Sum_probs=186.0
Q ss_pred ccCCCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCc--ccHhHHHHcCCcc
Q 014216 25 LYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN--EHQSLAQEYGIRG 102 (428)
Q Consensus 25 ~~~~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~ 102 (428)
.......+++|+.++|++.+...+++++|+||++||++|+++.|.|.+++..+++.+.++.|||+ +++.+|++|+|.+
T Consensus 12 ~~~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~ 91 (298)
T 3ed3_A 12 FYDSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNG 91 (298)
T ss_dssp SCSSCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCB
T ss_pred CCCCCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCc
Confidence 34456789999999999666567889999999999999999999999999999988999999998 7899999999999
Q ss_pred ccEEEEEeCCC-----------------CCccccCCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEe
Q 014216 103 FPTIKVFVPGK-----------------PPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIEL 165 (428)
Q Consensus 103 ~P~~~~~~~g~-----------------~~~~~~g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 165 (428)
+|++++|.+|+ ....|.|.++.+.|..|+.+. ..+.+..+
T Consensus 92 ~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~-----------------------~~~~v~~i 148 (298)
T 3ed3_A 92 FPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSR-----------------------IRSYVKKF 148 (298)
T ss_dssp SSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTT-----------------------CCCCEEEC
T ss_pred cceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHh-----------------------cccccEEc
Confidence 99999999986 257899999999999999877 36778888
Q ss_pred Cc-cchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHh--hhcC-----C-------
Q 014216 166 NS-SNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLM--SKFN-----V------- 230 (428)
Q Consensus 166 ~~-~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~--~~~~-----v------- 230 (428)
++ +++.+++...+.+.+++|... ....+.|.++|..+++.+.|+.++......+. ++|+ |
T Consensus 149 ~~~~~l~~~l~~~~~~~vi~fs~~-----~~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~ 223 (298)
T 3ed3_A 149 VRIDTLGSLLRKSPKLSVVLFSKQ-----DKISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKV 223 (298)
T ss_dssp SCGGGHHHHHTSCSSEEEEEEESS-----SSCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCceEEEEEcCC-----CcchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcc
Confidence 55 567666644456777777543 45678999999999999999998643222222 3333 2
Q ss_pred ------CcCcEEEEEcCCCCCcccccC-CCCHHHHHHHHHHHHhhcCCCCcceecCchhhhh
Q 014216 231 ------QGFPTILVFGADKDSPIPYEG-ARTAGAIESFALEQLETNVAPPEVTELTSQDVME 285 (428)
Q Consensus 231 ------~~~P~i~~~~~~~~~~~~y~g-~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~ 285 (428)
...|+|++|+...+.++.|.| ..+.++|.+||.+... ..|.+.+++..+.+.
T Consensus 224 ~~~~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~~i~~fi~~~~~---~~p~~~~ls~~~~~~ 282 (298)
T 3ed3_A 224 IPEQRQSDKSKLVVFDADKDKFWEYEGNSINKNDISKFLRDTFS---ITPNEGPFSRRSEYI 282 (298)
T ss_dssp HHHHTTCSSCEEEEEETTTTEEEECCCSSCCHHHHHHHHHHHHT---CCCSSSTTSHHHHHH
T ss_pred cccccccCCCeEEEEcCCCCceEEeccccCCHHHHHHHHHhhcC---CCCCcCCCchHHHHH
Confidence 568999999877778999995 6899999999986543 468888888765443
No 14
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.94 E-value=4.8e-26 Score=201.74 Aligned_cols=192 Identities=14% Similarity=0.192 Sum_probs=158.1
Q ss_pred CCCeEEEEEECCC--ChhhhhhhHHHHHHHHHh---cCc--eEEEEEcCcccHhHHHHcCCccccEEEEEeCCCCCcccc
Q 014216 47 ANGVVLVEFYAPW--CGHCQALTPIWEKAATVL---KGV--ATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQ 119 (428)
Q Consensus 47 ~~~~~lv~f~~~~--C~~C~~~~~~~~~~~~~~---~~~--v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~ 119 (428)
-.++++|.||++| |++|+.+.+.+.++++.. +++ +.|+.+|+++++++|++|||.++|++.++ +| ..+|.
T Consensus 24 ~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~-~g--~~~~~ 100 (243)
T 2hls_A 24 MVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL-GG--EVRWT 100 (243)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-TT--TEEEE
T ss_pred CCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-CC--ceeEc
Confidence 3689999999999 999999999999999884 344 99999999999999999999999999998 55 68899
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHH
Q 014216 120 GARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPE 199 (428)
Q Consensus 120 g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~ 199 (428)
|......+..|+...+.. .+ ....++.+.+.......++++++.||++||++|+.+.+.
T Consensus 101 G~~~~~~l~~fv~~~l~~------~~---------------~~~~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~ 159 (243)
T 2hls_A 101 GIPAGEEIRALVEVIMRL------SE---------------DESGLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLL 159 (243)
T ss_dssp SCCCTTHHHHHHHHHHHH------HT---------------TCCCCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHhc------cC---------------CCCCCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHH
Confidence 998888999998776521 00 011233333333221235677899999999999999999
Q ss_pred HHHHHHHhc----CCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 200 WKKAANNLK----GKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 200 ~~~~a~~~~----~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
|++++..+. ..+.++.||++.+++++++|+|.++|++++ +++ ..|.|..+.++|.+++.+.+.
T Consensus 160 l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i---~G~--~~~~G~~~~~~l~~~l~~~~~ 226 (243)
T 2hls_A 160 AHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI---NGY--LVFVGVPYEEDFLDYVKSAAE 226 (243)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE---TTE--EEEESCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE---CCE--EEEeCCCCHHHHHHHHHHHhh
Confidence 999999983 579999999999999999999999999988 332 348999999999999998874
No 15
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=6.7e-24 Score=193.57 Aligned_cols=217 Identities=28% Similarity=0.496 Sum_probs=176.3
Q ss_pred CCCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC--CchhHhhhcCCCcCc
Q 014216 157 SDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD--SEKSLMSKFNVQGFP 234 (428)
Q Consensus 157 ~~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~--~~~~~~~~~~v~~~P 234 (428)
...+.+++|+.++|.+.+.+.+++++|.||++||++|+.+.+.|.++++.+.+.+.++.|+|+ .+..+|++|+|.++|
T Consensus 14 ~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~P 93 (298)
T 3ed3_A 14 DSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFP 93 (298)
T ss_dssp SSCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSS
T ss_pred CCCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccc
Confidence 357789999999999998667789999999999999999999999999999988999999998 578999999999999
Q ss_pred EEEEEcCCC----------------CCcccccCCCCHHHHHHHHHHHHhhcCCCCcceecCchhhhhhhcCC-CCeEEEE
Q 014216 235 TILVFGADK----------------DSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGS-AAICFVS 297 (428)
Q Consensus 235 ~i~~~~~~~----------------~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~~~~vi~ 297 (428)
++++|+++. .....|.|..+.+.|.+|+.+.+ .+.+.++++.+.++.+... ..+++++
T Consensus 94 t~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~-----~~~v~~i~~~~~l~~~l~~~~~~~vi~ 168 (298)
T 3ed3_A 94 TLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRI-----RSYVKKFVRIDTLGSLLRKSPKLSVVL 168 (298)
T ss_dssp EEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTC-----CCCEEECSCGGGHHHHHTSCSSEEEEE
T ss_pred eEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhc-----ccccEEcCCHHHHHHHHhcCCceEEEE
Confidence 999998654 13678999999999999998885 5778888887777777755 4677777
Q ss_pred ecCCccchhhhchhHHHHHHHHHHHHhhcCcceEEEecCCCchhHH--HHhC-----C-----------CCCCCceEEEE
Q 014216 298 FLPDILDSKAEGRNKYLEMLLSVAEKFKRGHYSFVWAAAGKQPDLE--NRVG-----V-----------GGYGYPALVAL 359 (428)
Q Consensus 298 f~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~f~~id~~~~~~~~--~~~g-----l-----------~~~~~P~~~i~ 359 (428)
|... +. ....++.+|..|+++ +.|+.+...+-.... +.|+ + .....|+++++
T Consensus 169 fs~~--~~-------~~~~f~~~A~~~~~~-~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~ 238 (298)
T 3ed3_A 169 FSKQ--DK-------ISPVYKSIALDWLGK-FDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVF 238 (298)
T ss_dssp EESS--SS-------CCHHHHHHHHHTBTT-EEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred EcCC--Cc-------chHHHHHHHHHhhcC-cEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEE
Confidence 7322 11 227899999999998 999998764332222 3333 1 11358999999
Q ss_pred eccCCccccCCC-CCCHHHHHHHHHHHhcC
Q 014216 360 NVKKGVYTPLKS-AFELEHIVEFVKEAGRG 388 (428)
Q Consensus 360 ~~~~~~~~~~~~-~~~~~~i~~fi~~~~~g 388 (428)
+...+++..|+| .++.++|.+||.+..+.
T Consensus 239 ~~~~~~~~~y~g~~~~~~~i~~fi~~~~~~ 268 (298)
T 3ed3_A 239 DADKDKFWEYEGNSINKNDISKFLRDTFSI 268 (298)
T ss_dssp ETTTTEEEECCCSSCCHHHHHHHHHHHHTC
T ss_pred cCCCCceEEeccccCCHHHHHHHHHhhcCC
Confidence 988888888995 79999999999976544
No 16
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.92 E-value=5.5e-24 Score=189.44 Aligned_cols=213 Identities=23% Similarity=0.387 Sum_probs=158.5
Q ss_pred cccccCCCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC---ceEEEEEcC--cccHhHHH
Q 014216 22 SDALYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG---VATVAALDA--NEHQSLAQ 96 (428)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~v~~~~vd~--~~~~~l~~ 96 (428)
..++++...++..++.++|+..+..++++++|+||++||++|+++.|.|+++++.+++ .+.|+.||| +++.++|+
T Consensus 4 ~~~l~~~~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~ 83 (244)
T 3q6o_A 4 MSALYSPSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCR 83 (244)
T ss_dssp --CCSCTTSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHH
T ss_pred ccCCCCCCCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHH
Confidence 4567778889999999999977777789999999999999999999999999999987 799999999 67899999
Q ss_pred HcCCccccEEEEEeCCCCC-----ccccCCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchH
Q 014216 97 EYGIRGFPTIKVFVPGKPP-----VDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFD 171 (428)
Q Consensus 97 ~~~v~~~P~~~~~~~g~~~-----~~~~g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 171 (428)
+|+|.++|++++|.+|+.. ..+.| .+.+.|.+++.+.++... .. .+ ...+++..++..++.
T Consensus 84 ~~~v~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~---------~~-~p---~~~p~l~~~~~~~l~ 149 (244)
T 3q6o_A 84 DFNIPGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHH---------DT-WP---PACPPLEPAXLEEID 149 (244)
T ss_dssp HTTCCSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCT---------TS-CC---TTSCCCSCCCHHHHH
T ss_pred HcCCCccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhcc---------cc-CC---CCCCCcccccHHHHH
Confidence 9999999999999876442 25666 689999999988874211 00 11 122334445667777
Q ss_pred HHHhhc-CCeEEEEEECCCChhHhhHHHHHHHHHHHhc--CCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCccc
Q 014216 172 ELVLKS-KDLWIVEFFAPWCGHCKKLAPEWKKAANNLK--GKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIP 248 (428)
Q Consensus 172 ~~~~~~-~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~--~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~ 248 (428)
.++... ..+.++.|....|. ...+++..+. ..+.+..++ +.+..++++|||+.+|+++++.+++. ...
T Consensus 150 ~~~~~~~~~~~al~f~~~~~~-------~~~~~~~d~~~~~~i~v~~~~-~~~~~l~~~f~v~~~Pslvl~~~~g~-~~~ 220 (244)
T 3q6o_A 150 GFFARNNEEYLALIFEXGGSY-------LAREVALDLSQHKGVAVRRVL-NTEANVVRKFGVTDFPSCYLLFRNGS-VSR 220 (244)
T ss_dssp THHHHCCCSEEEEEEECTTCC-------HHHHHHHHTTTCTTEEEEEEE-TTCHHHHHHHTCCCSSEEEEEETTSC-EEE
T ss_pred HHhhcCCCceEEEEEEECCcc-------hHHHHHHHhccCCceEEEEEe-CchHHHHHHcCCCCCCeEEEEeCCCC-eEe
Confidence 766544 34566777765432 3344555555 358888776 45689999999999999999986653 555
Q ss_pred ccCCCCHHH
Q 014216 249 YEGARTAGA 257 (428)
Q Consensus 249 y~g~~~~~~ 257 (428)
+.......+
T Consensus 221 ~~~~~~~r~ 229 (244)
T 3q6o_A 221 VPVLMESRS 229 (244)
T ss_dssp CCCSSSSHH
T ss_pred eccccccHH
Confidence 554444433
No 17
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.92 E-value=5.2e-23 Score=182.94 Aligned_cols=218 Identities=32% Similarity=0.544 Sum_probs=177.7
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC---eEEEEEeCCCchhHhhhcCCCcCc
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK---VKLGHVDCDSEKSLMSKFNVQGFP 234 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~---~~f~~v~~~~~~~~~~~~~v~~~P 234 (428)
....+..++.+++...+ ..+++++|.||++||++|+.+.+.|.++++.+.+. +.|+.||++.+..++++|+|+++|
T Consensus 13 ~~~~v~~l~~~~~~~~~-~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 91 (241)
T 3idv_A 13 EENGVLVLNDANFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYP 91 (241)
T ss_dssp EETTEEEECTTTHHHHH-TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSS
T ss_pred cCCCcEEecccCHHHHH-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCC
Confidence 45679999999999876 56789999999999999999999999999999875 999999999999999999999999
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhhcCCC-C-cceecCchhhhhhhcCCCCeEEEEecCCccchhhhchhH
Q 014216 235 TILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAP-P-EVTELTSQDVMEEKCGSAAICFVSFLPDILDSKAEGRNK 312 (428)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~-~-~v~~l~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~ 312 (428)
++++|+++. .+.|.|..+.+.|.+|+.+.+...... + .+..++..+ +.......+.+++.|...|+.... .
T Consensus 92 t~~~~~~g~--~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~f~a~wC~~C~----~ 164 (241)
T 3idv_A 92 TIKILKKGQ--AVDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKEN-FDEVVNDADIILVEFYAPWCGHCK----K 164 (241)
T ss_dssp EEEEEETTE--EEECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTT-HHHHHHHCSEEEEEEECTTCTGGG----G
T ss_pred EEEEEcCCC--cccccCcccHHHHHHHHhhccCcccccccccceeccHHH-HHHhhccCCeEEEEEECCCCHHHH----H
Confidence 999997543 567999999999999999887543221 2 244454444 444444556888888877664433 3
Q ss_pred HHHHHHHHHHHhhcCc--ceEEEecCCCchhHHHHhCCCCCCCceEEEEeccCCccccCCCCCCHHHHHHHHHHHhc
Q 014216 313 YLEMLLSVAEKFKRGH--YSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLKSAFELEHIVEFVKEAGR 387 (428)
Q Consensus 313 ~~~~~~~~a~~~~~~~--~~f~~id~~~~~~~~~~~gl~~~~~P~~~i~~~~~~~~~~~~~~~~~~~i~~fi~~~~~ 387 (428)
+...+.++|..++++. +.|+.+|...+++++++||+.. +|++++++. ++...|.|..+.++|.+||.+...
T Consensus 165 ~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~--~Pt~~~~~~--g~~~~~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 165 LAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSG--YPTLKIFRK--GRPYDYNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp THHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCS--SSEEEEEET--TEEEECCSCCSHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcc--cCEEEEEEC--CeEEEecCCCCHHHHHHHHHhhhC
Confidence 4567888888887643 8999999999999999999986 999999873 344458999999999999999853
No 18
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.92 E-value=5.2e-23 Score=193.85 Aligned_cols=207 Identities=17% Similarity=0.234 Sum_probs=173.9
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHH------HHHHHHHHHhcC-CeEEEEEeCCCchhHhhhcCC
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLA------PEWKKAANNLKG-KVKLGHVDCDSEKSLMSKFNV 230 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~------~~~~~~a~~~~~-~~~f~~v~~~~~~~~~~~~~v 230 (428)
..+.|..|+..+|.+.+ ..+++++|.||++||++|.... +.|.++|..+.+ .+.|+.|||+.++++|++|+|
T Consensus 11 ~~~~v~~lt~~~f~~~i-~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V 89 (367)
T 3us3_A 11 GVDRVINVNAKNYKNVF-KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGL 89 (367)
T ss_dssp CCCCCEECCTTTHHHHH-HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTC
T ss_pred CCCccEECCHHHHHHHH-hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCC
Confidence 45679999999999987 6688999999999999974433 689999999987 499999999999999999999
Q ss_pred CcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhhcCCCCcceecCchhhhhhhcC-CCCeEEEEecCCccchhhhc
Q 014216 231 QGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCG-SAAICFVSFLPDILDSKAEG 309 (428)
Q Consensus 231 ~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~-~~~~~vi~f~~~~~~~~~~~ 309 (428)
+++|++++|+++ .+..|.|..+.+.|.+|+.+++ .+.+..+++.+.++.+.. .....+|+|+..+..
T Consensus 90 ~~~PTl~~f~~G--~~~~y~G~~~~~~i~~~i~~~~-----~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~----- 157 (367)
T 3us3_A 90 TEEDSIYVFKED--EVIEYDGEFSADTLVEFLLDVL-----EDPVELIEGERELQAFENIEDEIKLIGYFKNKDS----- 157 (367)
T ss_dssp CSTTEEEEEETT--EEEECCSCCSHHHHHHHHHHHH-----SCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTC-----
T ss_pred CcCceEEEEECC--cEEEeCCCCCHHHHHHHHHHhc-----CCCcEEcCCHHHHHHHhccCCCcEEEEEECCCCc-----
Confidence 999999999854 3679999999999999999986 477889988777887776 567788888755221
Q ss_pred hhHHHHHHHHHHHHhhcCcceEEEecCCCchhHHHHhCCCCCCCceEEEEeccCCccccCCCC-CCHHHHHHHHHHHh
Q 014216 310 RNKYLEMLLSVAEKFKRGHYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLKSA-FELEHIVEFVKEAG 386 (428)
Q Consensus 310 ~~~~~~~~~~~a~~~~~~~~~f~~id~~~~~~~~~~~gl~~~~~P~~~i~~~~~~~~~~~~~~-~~~~~i~~fi~~~~ 386 (428)
.....+.++|..+++. +.|+.+.. ..+++.+|++. |+++++++..+....|.|. .+.+.|.+||....
T Consensus 158 --~~~~~f~~~A~~~~~~-~~F~~~~~---~~~~~~~~v~~---p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~ 226 (367)
T 3us3_A 158 --EHYKAFKEAAEEFHPY-IPFFATFD---SKVAKKLTLKL---NEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHR 226 (367)
T ss_dssp --HHHHHHHHHHHHHTTT-SCEEEECC---HHHHHHHTCCT---TCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTC
T ss_pred --hHHHHHHHHHHhhcCC-cEEEEECC---HHHHHHcCCCC---CeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcC
Confidence 3447899999999988 88988754 78999999984 9999998765666678884 99999999998864
No 19
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.92 E-value=2.5e-23 Score=195.25 Aligned_cols=207 Identities=18% Similarity=0.260 Sum_probs=175.4
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHH-------HHHHHHHhcC-CeEEEEEeCCCchhHhhhcC
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPE-------WKKAANNLKG-KVKLGHVDCDSEKSLMSKFN 229 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~-------~~~~a~~~~~-~~~f~~v~~~~~~~~~~~~~ 229 (428)
..+.|..++..++.+.+ ..+++++|.||++||+ |+.+.|. |.++|+.+.+ .+.|+.|||+.+.++|++|+
T Consensus 9 ~~~~v~~l~~~~f~~~i-~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~ 86 (350)
T 1sji_A 9 GKDRVVSLTEKNFKQVL-KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLG 86 (350)
T ss_dssp CCCCCEEECHHHHHHHH-TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHT
T ss_pred CCCccEECCHHHHHHHH-hhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcC
Confidence 45679999999999876 5678999999999999 9988888 9999999987 59999999999999999999
Q ss_pred CCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhhcCCCCcceecCchhhhhhhcC-CCCeEEEEecCCccchhhh
Q 014216 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCG-SAAICFVSFLPDILDSKAE 308 (428)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~-~~~~~vi~f~~~~~~~~~~ 308 (428)
|+++|++++|+.+. ...|.|..+.+.|.+|+.+.+ .|.+.++++.+.++.++. ....++|+|+....
T Consensus 87 v~~~Pt~~~~~~g~--~~~~~G~~~~~~l~~~i~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~----- 154 (350)
T 1sji_A 87 FDEEGSLYVLKGDR--TIEFDGEFAADVLVEFLLDLI-----EDPVEIINSKLEVQAFERIEDQIKLIGFFKSEE----- 154 (350)
T ss_dssp CCSTTEEEEEETTE--EEEECSCCCHHHHHHHHHTTS-----SCSEEECCSHHHHHHHHHCCSSCEEEEECSCTT-----
T ss_pred CCccceEEEEECCc--EEEecCCCCHHHHHHHHHHhc-----CCcceeccchHHHHHHhccCCCcEEEEEECCCC-----
Confidence 99999999997554 779999999999999998885 477888988777777776 66678888876521
Q ss_pred chhHHHHHHHHHHHHhhcCcceEEEecCCCchhHHHHhCCCCCCCceEEEEeccCCccccCCCC-CCHHHHHHHHHHHhc
Q 014216 309 GRNKYLEMLLSVAEKFKRGHYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLKSA-FELEHIVEFVKEAGR 387 (428)
Q Consensus 309 ~~~~~~~~~~~~a~~~~~~~~~f~~id~~~~~~~~~~~gl~~~~~P~~~i~~~~~~~~~~~~~~-~~~~~i~~fi~~~~~ 387 (428)
......+.++|..+++. +.|+.+. ++.+++.+|++ .|+++++++..+....|.|. .+.++|.+||.....
T Consensus 155 --~~~~~~~~~~A~~~~~~-~~f~~~~---~~~~~~~~~v~---~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~ 225 (350)
T 1sji_A 155 --SEYYKAFEEAAEHFQPY-IKFFATF---DKGVAKKLSLK---MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQR 225 (350)
T ss_dssp --SHHHHHHHHHHHHTTTT-SEEEEEC---CHHHHHHHTCC---TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCC
T ss_pred --cHHHHHHHHHHHhhccC-cEEEEEC---CHHHHHHcCCC---CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCc
Confidence 12347899999999988 8999884 47899999997 79999998766666778886 999999999998753
No 20
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.90 E-value=4.5e-22 Score=177.24 Aligned_cols=220 Identities=18% Similarity=0.236 Sum_probs=175.4
Q ss_pred CCCCcEEeCc-cchHHHHhhc-CCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcE
Q 014216 158 DSNESIELNS-SNFDELVLKS-KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (428)
Q Consensus 158 ~~~~v~~l~~-~~~~~~~~~~-~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~ 235 (428)
++|++..+++ +++.++ .+. +++++|.|+.++| ....+.|.++|..+++.+.|+.+ .+.+++++++++. |+
T Consensus 4 ~gP~v~~l~s~~~~~~~-~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t---~~~~v~~~~~v~~-p~ 75 (250)
T 3ec3_A 4 GSPPSKEILTLKQVQEF-LKDGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHT---FSTEIAKFLKVSL-GK 75 (250)
T ss_dssp -CCSSEECCCHHHHHHH-HHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEE---CCHHHHHHHTCCS-SE
T ss_pred CCCCceecCCHHHHHHH-HhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEE---CcHHHHHHcCCCC-Ce
Confidence 5788999977 455544 466 8899999999865 67999999999999999999986 4678999999987 99
Q ss_pred EEEEcCC------CCCccccc--CCCCHHHHHHHHHHHHhhcCCCCcceecCchhhhhhhcCCCCeEEEEecCCccchhh
Q 014216 236 ILVFGAD------KDSPIPYE--GARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSAAICFVSFLPDILDSKA 307 (428)
Q Consensus 236 i~~~~~~------~~~~~~y~--g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~vi~f~~~~~~~~~ 307 (428)
|++|+++ ++....|. |..+.+.|.+|+..+ ..|.|.+++..+....+ .+.+++++++..+......
T Consensus 76 ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~-----~~Plv~e~t~~n~~~~~-~~~~l~~~~~~~d~~~~~~ 149 (250)
T 3ec3_A 76 LVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKH-----ALPLVGHRKTSNDAKRY-SKRPLVVVYYSVDFSFDYR 149 (250)
T ss_dssp EEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHH-----SSCTEEEECTTTHHHHS-CSSSEEEEEECCCCSTTTH
T ss_pred EEEEecchhhccccccceeccCCCCCCHHHHHHHHHHc-----CCCceeecCccchhhhh-ccCccEEEEEecccccccc
Confidence 9999853 35577888 478999999999999 57999999998876655 4566776666534222324
Q ss_pred hchhHHHHHHHHHHHHhhcCcceEEEecCCCchhHHHHhCCCCCCC-ceEEEEeccCCccccCCCCCCHHHHHHHHHHHh
Q 014216 308 EGRNKYLEMLLSVAEKFKRGHYSFVWAAAGKQPDLENRVGVGGYGY-PALVALNVKKGVYTPLKSAFELEHIVEFVKEAG 386 (428)
Q Consensus 308 ~~~~~~~~~~~~~a~~~~~~~~~f~~id~~~~~~~~~~~gl~~~~~-P~~~i~~~~~~~~~~~~~~~~~~~i~~fi~~~~ 386 (428)
++++.+++.++++|++|+ + +.|+|+|...+...++.||++.... |.+++++..+.+|....++++.+.|.+|+++++
T Consensus 150 ~~~~~~~~~~~~vAk~~k-k-i~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~ 227 (250)
T 3ec3_A 150 TATQFWRNKVLEVAKDFP-E-YTFAIADEEDYATEVKDLGLSESGGDVNAAILDESGKKFAMEPEEFDSDALREFVMAFK 227 (250)
T ss_dssp HHHHHHHHHHHHHHTTCT-T-SEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTTSCEEECCCCSCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhc-c-eeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCCceecCCcccCCHHHHHHHHHHHH
Confidence 566779999999999999 6 9999999988888999999986544 578888755555643337899999999999999
Q ss_pred cCCCCCC
Q 014216 387 RGGKGNL 393 (428)
Q Consensus 387 ~g~~~~~ 393 (428)
+|+....
T Consensus 228 ~Gkl~p~ 234 (250)
T 3ec3_A 228 KGKLKPV 234 (250)
T ss_dssp TTCCCCC
T ss_pred CCCccce
Confidence 9984433
No 21
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.90 E-value=4.8e-22 Score=177.49 Aligned_cols=219 Identities=21% Similarity=0.308 Sum_probs=176.5
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEE
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~ 237 (428)
..|++..|++.+..+.+.+.+.+++|.|+++|| ......|.++|..+++.+.|+.+ .+.+++++++++. |+++
T Consensus 4 ~gP~v~~l~s~~~~~~~l~~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~~~~F~~~---~~~~v~~~~~~~~-p~i~ 76 (252)
T 2h8l_A 4 GSPASVPLRTEEEFKKFISDKDASIVGFFDDSF---SEAHSEFLKAASNLRDNYRFAHT---NVESLVNEYDDNG-EGII 76 (252)
T ss_dssp --CCEEECCSHHHHHHHHTSSSCEEEEEESCTT---SHHHHHHHHHHHHTTTTSCEEEE---CCHHHHHHHCSSS-EEEE
T ss_pred CCCCceeecCHHHHHHHhhcCCeEEEEEECCCC---ChHHHHHHHHHHhcccCcEEEEE---ChHHHHHHhCCCC-CcEE
Confidence 577899997655555555777889999999875 66889999999999999999987 4578999999997 9999
Q ss_pred EEcCC------CCCcccc-cCCCCHHHHHHHHHHHHhhcCCCCcceecCchhhhhhhcCCCCeEEEEecCCccchhhhch
Q 014216 238 VFGAD------KDSPIPY-EGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSAAICFVSFLPDILDSKAEGR 310 (428)
Q Consensus 238 ~~~~~------~~~~~~y-~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~ 310 (428)
+|+++ ++....| .|.++.+.|.+||..+ ..|.|.++|..+.... ...+++++++..+. ....++.
T Consensus 77 ~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~-----~~Plv~e~t~~n~~~~--~~~~~~v~~~~~~~-~~~~~~~ 148 (252)
T 2h8l_A 77 LFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQEN-----IFGICPHMTEDNKDLI--QGKDLLIAYYDVDY-EKNAKGS 148 (252)
T ss_dssp EECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHH-----SSCSSCEECTTTHHHH--SSSSEEEEEECCBT-TTBHHHH
T ss_pred EEcchhhcccccccccccCCCCcCHHHHHHHHHhc-----ccCCeeecccccHhhh--cCCCeEEEEeecch-hhcchhH
Confidence 99852 3457889 9999999999999999 4799999999887664 34567666654432 2233456
Q ss_pred hHHHHHHHHHHHHhhcC--cceEEEecCCCchhHHHHhCC--CCCCCceEEEEeccCCccccCCCCCCHHH--HHHHHHH
Q 014216 311 NKYLEMLLSVAEKFKRG--HYSFVWAAAGKQPDLENRVGV--GGYGYPALVALNVKKGVYTPLKSAFELEH--IVEFVKE 384 (428)
Q Consensus 311 ~~~~~~~~~~a~~~~~~--~~~f~~id~~~~~~~~~~~gl--~~~~~P~~~i~~~~~~~~~~~~~~~~~~~--i~~fi~~ 384 (428)
+.+++.++++|++|+++ .+.|+|+|...+..++..||+ +...+|++++++..+.+| .+.++++.+. |.+|+++
T Consensus 149 ~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~ky-~~~~~~t~~~~~i~~F~~~ 227 (252)
T 2h8l_A 149 NYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKF-VMQEEFSRDGKALERFLQD 227 (252)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSCEE-ECCSCCCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCcEe-cCCcccCcchHHHHHHHHH
Confidence 67899999999999964 499999999988899999999 556799999998655555 5678899999 9999999
Q ss_pred HhcCCCCC
Q 014216 385 AGRGGKGN 392 (428)
Q Consensus 385 ~~~g~~~~ 392 (428)
+++|+...
T Consensus 228 ~~~Gkl~~ 235 (252)
T 2h8l_A 228 YFDGNLKR 235 (252)
T ss_dssp HHHTCSCC
T ss_pred HHCCCccc
Confidence 99997633
No 22
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.90 E-value=2.9e-22 Score=175.93 Aligned_cols=211 Identities=16% Similarity=0.232 Sum_probs=172.5
Q ss_pred CCcEEeCc-cchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEE
Q 014216 160 NESIELNS-SNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILV 238 (428)
Q Consensus 160 ~~v~~l~~-~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~ 238 (428)
..++.+++ +++.++ ++.+++++|.|+++|| ....+.|.++|+.+ +.+.|+.+ .+++++++++++. |+|++
T Consensus 9 ~~~~~l~s~~~~~~~-l~~~~v~vVgff~~~~---~~~~~~f~~~A~~l-~~~~F~~t---~~~~v~~~~~v~~-p~i~l 79 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEF-IAATEVAVIGFFQDLE---IPAVPILHSMVQKF-PGVSFGIS---TDSEVLTHYNITG-NTICL 79 (227)
T ss_dssp CCCEECCSHHHHHHH-HHTSSEEEEEECSCSC---STHHHHHHHHTTTC-TTSEEEEE---CCHHHHHHTTCCS-SEEEE
T ss_pred CCCeeeCCHHHHHHH-HhcCCeEEEEEecCCC---chhHHHHHHHHHhC-CCceEEEE---CCHHHHHHcCCCC-CeEEE
Confidence 34566755 666665 4778899999999976 68999999999999 48999985 5688999999998 99999
Q ss_pred EcCCCCCcccccC----CCCHHHHHHHHHHHHhhcCCCCcceecCchhhhhhhcCCCCeEEEEecCCccchhhhchhHHH
Q 014216 239 FGADKDSPIPYEG----ARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSAAICFVSFLPDILDSKAEGRNKYL 314 (428)
Q Consensus 239 ~~~~~~~~~~y~g----~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~~ 314 (428)
|+..++....|.| ..+.+.|.+|+..+ ..|.|.+++..+....+....++++++|...+ ....+.++
T Consensus 80 fk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~-----~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~----~~~~~~~~ 150 (227)
T 4f9z_D 80 FRLVDNEQLNLEDEDIESIDATKLSRFIEIN-----SLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKA----SPEYEENM 150 (227)
T ss_dssp EETTTTEEEEECHHHHHTCCHHHHHHHHHHH-----CCCSEEECCHHHHHHHHHSSCCEEEEEEECTT----STTHHHHH
T ss_pred EEecCcccccccccccCCCCHHHHHHHHHHh-----CCCceeecCcccHHHHhccCCceEEEEEEcCC----cchHHHHH
Confidence 9976655678884 78999999999999 68999999988866665555567777775431 24566788
Q ss_pred HHHHHHHHHhhcCcceEEEecCC--CchhHHHHhCCCCCCCceEEEEeccCCccccC-CCCCCHHHHHHHHHHHhcCC
Q 014216 315 EMLLSVAEKFKRGHYSFVWAAAG--KQPDLENRVGVGGYGYPALVALNVKKGVYTPL-KSAFELEHIVEFVKEAGRGG 389 (428)
Q Consensus 315 ~~~~~~a~~~~~~~~~f~~id~~--~~~~~~~~~gl~~~~~P~~~i~~~~~~~~~~~-~~~~~~~~i~~fi~~~~~g~ 389 (428)
+.++++|++|+++ +.|+++|.. .+...++.||++...+|++++++..+++++.+ .++++.+.|.+|++++++|+
T Consensus 151 ~~~~~vAk~~k~~-i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 151 HRYQKAAKLFQGK-ILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp HHHHHHHHHTTTT-CEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhCC-EEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 9999999999999 999999985 46678999999866799999999777654333 47899999999999999995
No 23
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.90 E-value=3.5e-22 Score=195.84 Aligned_cols=207 Identities=29% Similarity=0.540 Sum_probs=176.1
Q ss_pred CcEEeCccchHHHHhhcC---CeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEE
Q 014216 161 ESIELNSSNFDELVLKSK---DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (428)
Q Consensus 161 ~v~~l~~~~~~~~~~~~~---~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~ 237 (428)
.|..++.++|.+.+ ..+ ++++|.||++||++|+.+.+.|.++|+.+.+.+.|+.|||+.+..+|++|+|+++|+++
T Consensus 2 ~v~~l~~~~f~~~i-~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~ 80 (481)
T 3f8u_A 2 DVLELTDDNFESRI-SDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLK 80 (481)
T ss_dssp CCEEECTTTHHHHT-TCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEE
T ss_pred ceEEecHHHHHHHH-HhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEE
Confidence 57899999999987 555 89999999999999999999999999999989999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHHHhhcCCCCcceecCchhhhhhhcCCCCeEEEEecCCccchhhhchhHHHHHH
Q 014216 238 VFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSAAICFVSFLPDILDSKAEGRNKYLEML 317 (428)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~~~~~ 317 (428)
+|+++ +....|.|..+.+.|.+|+.+.+ .|.+.++++.+.++.++..+..++|+|+.... ......+
T Consensus 81 ~~~~g-~~~~~~~G~~~~~~l~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~-------~~~~~~f 147 (481)
T 3f8u_A 81 IFRDG-EEAGAYDGPRTADGIVSHLKKQA-----GPASVPLRTEEEFKKFISDKDASIVGFFDDSF-------SEAHSEF 147 (481)
T ss_dssp EEETT-EEEEECCSCSSHHHHHHHHHHHT-----SCSEEEECSHHHHHHHTTSSSCEEEEEESCTT-------CHHHHHH
T ss_pred EEeCC-ceeeeecCccCHHHHHHHHHhhc-----ccCceecCCHHHHHHHHhcCCcEEEEEECCCc-------cchHHHH
Confidence 99754 45788999999999999999985 57788998888888888888888888875422 2345889
Q ss_pred HHHHHHhhcCcceEEEecCCCchhHHHHhCCCCCCCceEEEEecc------CCccccCC-CCCCHHHHHHHHHHHhcC
Q 014216 318 LSVAEKFKRGHYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVK------KGVYTPLK-SAFELEHIVEFVKEAGRG 388 (428)
Q Consensus 318 ~~~a~~~~~~~~~f~~id~~~~~~~~~~~gl~~~~~P~~~i~~~~------~~~~~~~~-~~~~~~~i~~fi~~~~~g 388 (428)
.++|..+++. +.|+.+. ...+++.||++. |.++++++. .+....|+ +.++.+.|.+||....-.
T Consensus 148 ~~~a~~~~~~-~~F~~~~---~~~~~~~~~v~~---~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p 218 (481)
T 3f8u_A 148 LKAASNLRDN-YRFAHTN---VESLVNEYDDNG---EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFG 218 (481)
T ss_dssp HHHHHHHTTT-SCEEEEC---CHHHHHHHCSSS---EEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTT
T ss_pred HHHHHHhccC-ceEEEEC---CHHHHHHhCCCC---CcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCC
Confidence 9999999988 8998774 478999999985 447788732 34455677 789999999999998543
No 24
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.89 E-value=4e-22 Score=189.14 Aligned_cols=205 Identities=18% Similarity=0.371 Sum_probs=147.2
Q ss_pred CCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhc------CCeEEEEEeCCCchhHhhhcCCCc
Q 014216 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK------GKVKLGHVDCDSEKSLMSKFNVQG 232 (428)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~------~~~~f~~v~~~~~~~~~~~~~v~~ 232 (428)
.+.+..++..++.+.+ ..+++++|.||++||++|+.+.+.|.++|+.+. +.+.|+.|||+.+.++|++|+|++
T Consensus 4 ~~~v~~l~~~~f~~~~-~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~ 82 (382)
T 2r2j_A 4 GSEITSLDTENIDEIL-NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISK 82 (382)
T ss_dssp ----CBCCTTTHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCE
T ss_pred CCceEECCHHHHHHHH-hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCc
Confidence 4568899999999865 567899999999999999999999999999993 459999999999999999999999
Q ss_pred CcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhhcCCCCcceecCchhhhhhhcCCCCeEEEEecCCccchhhhchhH
Q 014216 233 FPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSAAICFVSFLPDILDSKAEGRNK 312 (428)
Q Consensus 233 ~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~ 312 (428)
+|++++|+.+......|.|..+.+.|.+|+.+.+ .+.+..+++.+.++. +.....++|+|+.... ..
T Consensus 83 ~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~-----~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~-------~~ 149 (382)
T 2r2j_A 83 YPTLKLFRNGMMMKREYRGQRSVKALADYIRQQK-----SDPIQEIRDLAEITT-LDRSKRNIIGYFEQKD-------SD 149 (382)
T ss_dssp ESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHH-----SCCCEEC-------------CCEEEEEESCSS-------SH
T ss_pred CCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhc-----cCCceecCCHHHHHH-hcCCCCEEEEEECCCC-------Ch
Confidence 9999999855322226999999999999999997 356777877666665 4555666777765421 12
Q ss_pred HHHHHHHHHHHhhcCcceEEEecCCCchhHHHHhCCCCCCCceEEEEecc--CCccccCCCCC-CHHHHHHHHHHHh
Q 014216 313 YLEMLLSVAEKFKRGHYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVK--KGVYTPLKSAF-ELEHIVEFVKEAG 386 (428)
Q Consensus 313 ~~~~~~~~a~~~~~~~~~f~~id~~~~~~~~~~~gl~~~~~P~~~i~~~~--~~~~~~~~~~~-~~~~i~~fi~~~~ 386 (428)
..+.|.++|..+++. +.|+.... ++.+.++++. .| + ++.+. ......|.|.+ +.+.|.+||....
T Consensus 150 ~~~~f~~~A~~~~~~-~~F~~~~~----~~~~~~~v~~--~p-i-~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~ 217 (382)
T 2r2j_A 150 NYRVFERVANILHDD-CAFLSAFG----DVSKPERYSG--DN-I-IYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKC 217 (382)
T ss_dssp HHHHHHHHHHHHTTT-CEEEEEES----CC----------CE-E-EEECSSSSSCCEECCSCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhcc-ceEEEEeh----hhHHhhCCCC--Cc-e-EECCCCCCCcCcccCCCCCCHHHHHHHHHhcc
Confidence 346899999999988 88877655 3567788874 67 4 55544 23446788988 9999999999875
No 25
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.88 E-value=2.1e-21 Score=189.16 Aligned_cols=203 Identities=23% Similarity=0.412 Sum_probs=155.7
Q ss_pred ccccccCCCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC---ceEEEEEcCc--ccHhHH
Q 014216 21 LSDALYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG---VATVAALDAN--EHQSLA 95 (428)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~v~~~~vd~~--~~~~l~ 95 (428)
...++++....+.+++.++|+..+.+++++++|+|||+||++|+++.|.|+++++.+++ .+.|+.|||+ ++.++|
T Consensus 3 ~~~~Ly~~~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~ 82 (519)
T 3t58_A 3 HMSVLYSSSDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVC 82 (519)
T ss_dssp --CCSCCTTSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHH
T ss_pred cccccCCCCCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHH
Confidence 34567777889999999999977777789999999999999999999999999999987 7999999995 589999
Q ss_pred HHcCCccccEEEEEeC----CCCCccccCCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchH
Q 014216 96 QEYGIRGFPTIKVFVP----GKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFD 171 (428)
Q Consensus 96 ~~~~v~~~P~~~~~~~----g~~~~~~~g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 171 (428)
++|+|.++|++++|.+ |+....+.|.++.+.+.+++.+.++. .. .. . ....+.+..++..++.
T Consensus 83 ~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~--------~~-~~-~---P~~~p~l~~it~~~l~ 149 (519)
T 3t58_A 83 REFNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALES--------HR-DT-W---PPACPPLEPAKLNDID 149 (519)
T ss_dssp HHTTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTT--------CC-SC-C---CTTCCCCSBCCHHHHT
T ss_pred HHcCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhh--------cc-cc-C---CCCCCccCcCCHHHHH
Confidence 9999999999999985 44456677889999999999887631 10 11 1 1123344556667777
Q ss_pred HHHhhc-CCeEEEEEECCCChhHhhHHHHHHHHHHHhcC--CeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCC
Q 014216 172 ELVLKS-KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG--KVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKD 244 (428)
Q Consensus 172 ~~~~~~-~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~--~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~ 244 (428)
.++... ..+.++.|.... .....+++..+.. .+.+..+. +.+..++++|||+.+|+++++.+++.
T Consensus 150 ~~l~~~~~~~vallF~~~~-------s~~~~~~~ldl~~~~~v~v~~v~-~~~~~l~~kfgV~~~Pslvl~~~nGk 217 (519)
T 3t58_A 150 GFFTRNKADYLALVFERED-------SYLGREVTLDLSQYHAVAVRRVL-NTESDLVNKFGVTDFPSCYLLLRNGS 217 (519)
T ss_dssp TGGGSCCCSEEEEEEECTT-------CCHHHHHHHHTTTCTTEEEEEEE-TTCHHHHHHHTCCCSSEEEEEETTSC
T ss_pred HHhccCCCCeEEEEecCCc-------hHHHHHHHHHhhccCCeeEEEec-CchHHHHHHcCCCCCCeEEEEeCCCc
Confidence 766444 336667777642 2245666666664 48887775 55789999999999999999987653
No 26
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.86 E-value=1.1e-20 Score=186.29 Aligned_cols=202 Identities=27% Similarity=0.527 Sum_probs=160.8
Q ss_pred CCCCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCCchhHhhhcCCCcCc
Q 014216 156 KSDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDSEKSLMSKFNVQGFP 234 (428)
Q Consensus 156 ~~~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~~~~~~~~~~v~~~P 234 (428)
......+..++..+|.+.+ ..+++++|.||++||++|+.+.+.|.++|+.+.+. +.|+.|||+.++.+|++|+|+++|
T Consensus 10 ~~~~~~v~~l~~~~f~~~~-~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 88 (504)
T 2b5e_A 10 APEDSAVVKLATDSFNEYI-QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFP 88 (504)
T ss_dssp CCTTSSCEECCTTTHHHHH-TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CCCCCCcEECCHHHHHHHH-hcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCC
Confidence 3456789999999999976 66889999999999999999999999999999985 999999999999999999999999
Q ss_pred EEEEEcCCCCC-cccccCCCCHHHHHHHHHHHHhhcCCCCcceecCchhhhhhhcCCCC--eEEEEecCCccchhhhchh
Q 014216 235 TILVFGADKDS-PIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSAA--ICFVSFLPDILDSKAEGRN 311 (428)
Q Consensus 235 ~i~~~~~~~~~-~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~--~~vi~f~~~~~~~~~~~~~ 311 (428)
++++|+.+... ...|.|..+.+.|.+|+.+.+ .+.+..+++ ++.+..... ..+|+|+... ..
T Consensus 89 t~~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~-----~~~v~~i~~---~~~~~~~~~~~~~~v~~f~~~-------~~ 153 (504)
T 2b5e_A 89 SLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQS-----QPAVAVVAD---LPAYLANETFVTPVIVQSGKI-------DA 153 (504)
T ss_dssp EEEEEETTCTTCEEECCSCCSHHHHHHHHHHHT-----SCSEEECSC---HHHHHHHSCCSSCEEEEEESC-------CH
T ss_pred EEEEEeCCccccceeecCCCCHHHHHHHHHHhc-----CCcceeHHH---HHHHHhcCCCceEEEEEeCCC-------Cc
Confidence 99999865421 788999999999999999996 466788877 444443334 4555555331 12
Q ss_pred HHHHHHHHHHHHhhcCcceEEEecCCCchhHHHHhCCCCCCCceEEEEeccCCccccCCCC-C---CHHHHHHHHHHHh
Q 014216 312 KYLEMLLSVAEKFKRGHYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLKSA-F---ELEHIVEFVKEAG 386 (428)
Q Consensus 312 ~~~~~~~~~a~~~~~~~~~f~~id~~~~~~~~~~~gl~~~~~P~~~i~~~~~~~~~~~~~~-~---~~~~i~~fi~~~~ 386 (428)
.....+..+|..+++. +.|+.++ ++++.+|++ +++++... ....|.|. + +.+.|.+||....
T Consensus 154 ~~~~~f~~~A~~~~~~-~~F~~~~-----~~~~~~~~~------i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~ 219 (504)
T 2b5e_A 154 DFNATFYSMANKHFND-YDFVSAE-----NADDDFKLS------IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEA 219 (504)
T ss_dssp HHHHHHHHHHHHTTTT-CEEEEEE-----CTTSCCEEE------EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHhhcC-cEEEEEH-----HHHHhcCCe------EEecCCCC-cccccCCcccccCCHHHHHHHHHhcc
Confidence 3457899999999988 8998775 455566653 66665533 55567887 7 9999999998764
No 27
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.85 E-value=1.2e-20 Score=150.00 Aligned_cols=112 Identities=24% Similarity=0.453 Sum_probs=96.9
Q ss_pred ccccCCCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhc-----CceEEEEEcCcccHhHHHH
Q 014216 23 DALYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK-----GVATVAALDANEHQSLAQE 97 (428)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-----~~v~~~~vd~~~~~~l~~~ 97 (428)
.+.+.....+..++.++|+..+.+++++++|+||++||++|+++.|.|.++++.+. +.+.++.|||++++++|++
T Consensus 8 ~~~~~~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~ 87 (127)
T 3h79_A 8 ANDGERPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIER 87 (127)
T ss_dssp -----CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHH
T ss_pred CCCcCCCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHh
Confidence 34455677899999999996665678999999999999999999999999998763 4699999999999999999
Q ss_pred cCCccccEEEEEeCCCCC--ccccCCCCcchHHHHHHHH
Q 014216 98 YGIRGFPTIKVFVPGKPP--VDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 98 ~~v~~~P~~~~~~~g~~~--~~~~g~~~~~~l~~~i~~~ 134 (428)
|+|.++|++++|.+|+.. ..|.|.++.+.|.+||.++
T Consensus 88 ~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 88 MRVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp TTCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred cCCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 999999999999988763 6899999999999999764
No 28
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.84 E-value=5.7e-19 Score=156.93 Aligned_cols=212 Identities=21% Similarity=0.388 Sum_probs=151.9
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcC---CeEEEEEeC--CCchhHhhhcCCCc
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG---KVKLGHVDC--DSEKSLMSKFNVQG 232 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~---~~~f~~v~~--~~~~~~~~~~~v~~ 232 (428)
....+..++..++...+.+.+++++|.||++||++|+.+.+.|.++++.+.+ .+.|+.||| +.+.++|++|+|.+
T Consensus 10 ~~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~ 89 (244)
T 3q6o_A 10 PSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG 89 (244)
T ss_dssp TTSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS
T ss_pred CCCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc
Confidence 4678999999999998877789999999999999999999999999999987 799999999 66889999999999
Q ss_pred CcEEEEEcCCCC----CcccccCCCCHHHHHHHHHHHHhhcCC-----CCcceecCchhhhhhhc-CCCCeEEEEecCCc
Q 014216 233 FPTILVFGADKD----SPIPYEGARTAGAIESFALEQLETNVA-----PPEVTELTSQDVMEEKC-GSAAICFVSFLPDI 302 (428)
Q Consensus 233 ~P~i~~~~~~~~----~~~~y~g~~~~~~i~~fi~~~~~~~~~-----~~~v~~l~~~~~~~~~~-~~~~~~vi~f~~~~ 302 (428)
+|++++|+.+.. ....+.| .+.+.|.+++.+.+..... .|.+...+..+....+. ......+++|.+..
T Consensus 90 ~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~ 168 (244)
T 3q6o_A 90 FPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXGG 168 (244)
T ss_dssp SSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECTT
T ss_pred cCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEECC
Confidence 999999986432 2335566 6999999999998876542 12233333333222222 33345555554331
Q ss_pred cchhhhchhHHHHHHHHHHHHhhcCc-ceEEEecCCCchhHHHHhCCCCCCCceEEEEeccCCccccCC-CCCCHHHHHH
Q 014216 303 LDSKAEGRNKYLEMLLSVAEKFKRGH-YSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLK-SAFELEHIVE 380 (428)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~a~~~~~~~-~~f~~id~~~~~~~~~~~gl~~~~~P~~~i~~~~~~~~~~~~-~~~~~~~i~~ 380 (428)
. ...++++..+...+ +.+..++. ....++++||++. +|+++++..++... .++ ...+.+.+..
T Consensus 169 ----~-------~~~~~~~~d~~~~~~i~v~~~~~-~~~~l~~~f~v~~--~Pslvl~~~~g~~~-~~~~~~~~r~~~~~ 233 (244)
T 3q6o_A 169 ----S-------YLAREVALDLSQHKGVAVRRVLN-TEANVVRKFGVTD--FPSCYLLFRNGSVS-RVPVLMESRSFYTA 233 (244)
T ss_dssp ----C-------CHHHHHHHHTTTCTTEEEEEEET-TCHHHHHHHTCCC--SSEEEEEETTSCEE-ECCCSSSSHHHHHH
T ss_pred ----c-------chHHHHHHHhccCCceEEEEEeC-chHHHHHHcCCCC--CCeEEEEeCCCCeE-eeccccccHHHHHH
Confidence 1 24455556666432 66666554 4589999999996 99999998655443 333 3345566666
Q ss_pred HHHHH
Q 014216 381 FVKEA 385 (428)
Q Consensus 381 fi~~~ 385 (428)
+++.+
T Consensus 234 ~l~~~ 238 (244)
T 3q6o_A 234 YLQRL 238 (244)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 66554
No 29
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.84 E-value=4.4e-19 Score=155.62 Aligned_cols=206 Identities=15% Similarity=0.186 Sum_probs=168.2
Q ss_pred CCcEEe-CccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEE
Q 014216 30 SPVVQL-TPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (428)
Q Consensus 30 ~~~~~l-~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~ 108 (428)
..+..+ +.++++ .+++.++.++|.|+++|| ....+.|.++|..+. .+.|+... +.++|+++++.+ |++++
T Consensus 9 ~~~~~l~s~~~~~-~~l~~~~v~vVgff~~~~---~~~~~~f~~~A~~l~-~~~F~~t~---~~~v~~~~~v~~-p~i~l 79 (227)
T 4f9z_D 9 QEPTWLTDVPAAM-EFIAATEVAVIGFFQDLE---IPAVPILHSMVQKFP-GVSFGIST---DSEVLTHYNITG-NTICL 79 (227)
T ss_dssp CCCEECCSHHHHH-HHHHTSSEEEEEECSCSC---STHHHHHHHHTTTCT-TSEEEEEC---CHHHHHHTTCCS-SEEEE
T ss_pred CCCeeeCCHHHHH-HHHhcCCeEEEEEecCCC---chhHHHHHHHHHhCC-CceEEEEC---CHHHHHHcCCCC-CeEEE
Confidence 344455 557787 567789999999999984 678999999999994 78888754 688999999998 99999
Q ss_pred EeCCCC-Ccccc----CCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhhcCCeEEE
Q 014216 109 FVPGKP-PVDYQ----GARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLWIV 183 (428)
Q Consensus 109 ~~~g~~-~~~~~----g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~v 183 (428)
|+.... ...|. |.++.+.|.+|+... ..+.+.+++.+++...+.......++
T Consensus 80 fk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~-----------------------~~plv~e~t~~n~~~~~~~~~~~~~l 136 (227)
T 4f9z_D 80 FRLVDNEQLNLEDEDIESIDATKLSRFIEIN-----------------------SLHMVTEYNPVTVIGLFNSVIQIHLL 136 (227)
T ss_dssp EETTTTEEEEECHHHHHTCCHHHHHHHHHHH-----------------------CCCSEEECCHHHHHHHHHSSCCEEEE
T ss_pred EEecCcccccccccccCCCCHHHHHHHHHHh-----------------------CCCceeecCcccHHHHhccCCceEEE
Confidence 987542 45677 478999999999988 68899999999988876433445566
Q ss_pred EEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCC--chhHhhhcCCC--cCcEEEEEcCCCCCcccc-cCCCCHHHH
Q 014216 184 EFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDS--EKSLMSKFNVQ--GFPTILVFGADKDSPIPY-EGARTAGAI 258 (428)
Q Consensus 184 ~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~--~~~~~~~~~v~--~~P~i~~~~~~~~~~~~y-~g~~~~~~i 258 (428)
.|..+||+.|..+.+.|+++|+.+++++.|+.+|++. ...+++.||+. .+|++++++..+...+.+ .+..+.+.|
T Consensus 137 ~f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i 216 (227)
T 4f9z_D 137 LIMNKASPEYEENMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHV 216 (227)
T ss_dssp EEECTTSTTHHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHH
T ss_pred EEEcCCcchHHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHH
Confidence 7778899999999999999999999999999999864 55788999998 789999997554333444 378999999
Q ss_pred HHHHHHHHh
Q 014216 259 ESFALEQLE 267 (428)
Q Consensus 259 ~~fi~~~~~ 267 (428)
.+|+.+.+.
T Consensus 217 ~~Fv~~~~~ 225 (227)
T 4f9z_D 217 QNFCDGFLS 225 (227)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhC
Confidence 999988753
No 30
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.83 E-value=2.8e-20 Score=141.85 Aligned_cols=100 Identities=23% Similarity=0.515 Sum_probs=87.4
Q ss_pred EEeC-ccchHHHhhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEe
Q 014216 33 VQLT-PNNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV 110 (428)
Q Consensus 33 ~~l~-~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~ 110 (428)
.+++ .++|++.+.+ ++++++|.|||+||++|+.+.|.|.++++.+++ +.|+.||++++++++++|+|+++||+++|+
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~ 81 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD-VVFLKVDVDECEDIAQDNQIACMPTFLFMK 81 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEETTTCHHHHHHTTCCBSSEEEEEE
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC-eEEEEEecccCHHHHHHcCCCeecEEEEEE
Confidence 3454 4678865544 478999999999999999999999999998875 789999999999999999999999999999
Q ss_pred CCCCCccccCCCCcchHHHHHHHH
Q 014216 111 PGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 111 ~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
+|+.+.++.| .+.+.|.++|.++
T Consensus 82 ~G~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 82 NGQKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp TTEEEEEEES-CCHHHHHHHHHHH
T ss_pred CCEEEEEEeC-cCHHHHHHHHHhc
Confidence 9998888988 5888899988764
No 31
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.83 E-value=3.8e-20 Score=143.40 Aligned_cols=107 Identities=21% Similarity=0.361 Sum_probs=100.0
Q ss_pred CCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEE
Q 014216 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (428)
Q Consensus 29 ~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~ 108 (428)
..++..++.++|...+..++++++|+||++||++|+.+.|.+.++++.+++++.|+.+|+++++.++++|+|.++|++++
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 82 (111)
T 3gnj_A 3 AMSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILY 82 (111)
T ss_dssp CCCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEEE
T ss_pred CCcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEEE
Confidence 45788999999996665789999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 109 FVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 109 ~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
|++|+.+.++.|..+.+.+.+|+.+.+
T Consensus 83 ~~~g~~~~~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 83 FKDGEYKGKMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp EETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred EECCEEEEEEeccCCHHHHHHHHHHHh
Confidence 999988889999999999999998876
No 32
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.83 E-value=4.4e-19 Score=155.88 Aligned_cols=196 Identities=15% Similarity=0.166 Sum_probs=153.4
Q ss_pred CCeEEEEEECC-CChhHhhHHHHHHHHHHHhcCCeEEEEEeCCC--chhHhhhcCCCcCcEEEEEcCCCCCcccccCCCC
Q 014216 178 KDLWIVEFFAP-WCGHCKKLAPEWKKAANNLKGKVKLGHVDCDS--EKSLMSKFNVQGFPTILVFGADKDSPIPYEGART 254 (428)
Q Consensus 178 ~~~~~v~f~~~-~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~--~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~ 254 (428)
+.++++.|+++ ||++|+.+.+.|.++++. .+++.|+.||++. +++++++|||+++|++++|+.+.....+|.|...
T Consensus 22 ~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~~ 100 (226)
T 1a8l_A 22 NPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLPA 100 (226)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTBCCSEEEESCCC
T ss_pred CCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCceeeEEEeccCc
Confidence 45678999999 999999999999999965 5689999999999 8999999999999999999766544578999888
Q ss_pred HHHHHHHHHHHHhhcCCCCcceecCchhhhhhhcCC-CCeEEEEecCCccchhhhchhHHHHHHHHHHHHhh----cCcc
Q 014216 255 AGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGS-AAICFVSFLPDILDSKAEGRNKYLEMLLSVAEKFK----RGHY 329 (428)
Q Consensus 255 ~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~-~~~~vi~f~~~~~~~~~~~~~~~~~~~~~~a~~~~----~~~~ 329 (428)
.+.+..|+...+..... ...++.. .++.+... ++..++.|+..|+..-. .+...+.+++..++ +. +
T Consensus 101 ~~~l~~~l~~~l~~~~~---~~~l~~~-~~~~~~~~~~~~~~v~F~a~wC~~C~----~~~p~~~~l~~~~~~~~~~~-v 171 (226)
T 1a8l_A 101 GHEFAAFLEDIVDVSRE---ETNLMDE-TKQAIRNIDQDVRILVFVTPTCPYCP----LAVRMAHKFAIENTKAGKGK-I 171 (226)
T ss_dssp TTHHHHHHHHHHHHHHT---CCCCCHH-HHHHHTTCCSCEEEEEEECSSCTTHH----HHHHHHHHHHHHHHHTTCCC-E
T ss_pred HHHHHHHHHHHHhhcCC---CCCCCHH-HHHHHHhcCCCcEEEEEeCCCCCccH----HHHHHHHHHHHhcccccCCc-E
Confidence 89999998886543221 2233333 33333333 34448888877764443 45577888999988 34 9
Q ss_pred eEEEecCCCchhHHHHhCCCCCCCceEEEEeccCCccccCCCCCCHHHHHHHHHHHh
Q 014216 330 SFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLKSAFELEHIVEFVKEAG 386 (428)
Q Consensus 330 ~f~~id~~~~~~~~~~~gl~~~~~P~~~i~~~~~~~~~~~~~~~~~~~i~~fi~~~~ 386 (428)
.|+.+|...++.+++.||+.. +|+++++. +++....+.|..+.+.|.+||.+.+
T Consensus 172 ~~~~vd~~~~~~l~~~~~v~~--~Pt~~~~~-~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 172 LGDMVEAIEYPEWADQYNVMA--VPKIVIQV-NGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp EEEEEEGGGCHHHHHHTTCCS--SCEEEEEE-TTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEEcccCHHHHHhCCCcc--cCeEEEEe-CCceeEEEcCCCCHHHHHHHHHHhh
Confidence 999999988999999999986 99998885 4444456778899999999999875
No 33
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.83 E-value=3.2e-20 Score=145.56 Aligned_cols=107 Identities=11% Similarity=0.148 Sum_probs=98.2
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEECCCC--hhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEE
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWC--GHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C--~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~ 107 (428)
.....+++++|++.+...+++++|+||++|| ++|+.+.|.++++++++.+++.|++||.|++++++.+|||+++||++
T Consensus 15 ~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPTli 94 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPSLA 94 (137)
T ss_dssp --CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSEEE
T ss_pred cCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCEEE
Confidence 4566999999997665555699999999999 99999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 108 VFVPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
+|++|+.+.+..|..+.+.+.++|.+++.
T Consensus 95 lFkdG~~v~~~vG~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 95 VVQPERTLGVIAKIQDWSSYLAQIGAMLA 123 (137)
T ss_dssp EEECCEEEEEEESCCCHHHHHHHHHHHHH
T ss_pred EEECCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 99999999999999999999999988773
No 34
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=1.1e-19 Score=145.08 Aligned_cols=114 Identities=54% Similarity=1.006 Sum_probs=104.0
Q ss_pred ccccCCCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCcc
Q 014216 23 DALYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRG 102 (428)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 102 (428)
..++.....+..++.++|...+..++++++|+||++||++|+++.|.|.++++.+++.+.|+.+|++++..++++|+|.+
T Consensus 10 ~~l~~~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~ 89 (130)
T 2dml_A 10 SGLYSSSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQG 89 (130)
T ss_dssp CCSSCTTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCS
T ss_pred ccccCCCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCc
Confidence 34566677899999999997677788999999999999999999999999999999889999999999999999999999
Q ss_pred ccEEEEEeCCCC-CccccCCCCcchHHHHHHHHHH
Q 014216 103 FPTIKVFVPGKP-PVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 103 ~P~~~~~~~g~~-~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
+|++++|.+|+. +.++.|..+.+.+.+|+.+.+.
T Consensus 90 ~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 90 FPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp SSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred cCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 999999988876 7889999999999999988764
No 35
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.82 E-value=8.4e-19 Score=154.38 Aligned_cols=196 Identities=19% Similarity=0.178 Sum_probs=152.1
Q ss_pred hcCCeEEEEEE-----CCCChhHhhHHHHHHHHHHHh--cCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCccc
Q 014216 176 KSKDLWIVEFF-----APWCGHCKKLAPEWKKAANNL--KGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIP 248 (428)
Q Consensus 176 ~~~~~~~v~f~-----~~~c~~c~~~~~~~~~~a~~~--~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~ 248 (428)
+...+++|.|| ++||++|+.+.+.|.++|+.+ .+.+.|+.|||+.++++|++|+|+++|++++|+ ++.....
T Consensus 18 ~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~-~~~~~~~ 96 (229)
T 2ywm_A 18 EFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIEG-DKDYGIR 96 (229)
T ss_dssp HCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEES-SSCCCEE
T ss_pred hccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEEC-CCcccce
Confidence 44556666555 788999999999999999888 678999999999999999999999999999997 4556789
Q ss_pred ccCCCCHHHHHHHHHHHHhhcCCCCcceecCchhhhhhhcC-CCCeEEEEecCCccchhhhchhHHHHHHHHHHHHhhcC
Q 014216 249 YEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCG-SAAICFVSFLPDILDSKAEGRNKYLEMLLSVAEKFKRG 327 (428)
Q Consensus 249 y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~-~~~~~vi~f~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 327 (428)
|.|..+.+++.+|+...+.... .+..++..+ ++.+.. ..+..++.|+..++..-. .+...+.+++..+ +.
T Consensus 97 ~~G~~~~~~l~~~~~~~~~~~~---~~~~l~~~~-~~~~~~~~~~~~~v~F~a~wC~~C~----~~~~~~~~~~~~~-~~ 167 (229)
T 2ywm_A 97 YIGLPAGLEFTTLINGIFHVSQ---RKPQLSEKT-LELLQVVDIPIEIWVFVTTSCGYCP----SAAVMAWDFALAN-DY 167 (229)
T ss_dssp EESCCCTTHHHHHHHHHHHHHT---TCCSCCHHH-HHHHTTCCSCEEEEEEECTTCTTHH----HHHHHHHHHHHHC-TT
T ss_pred ecCCccHHHHHHHHHHHHhccC---CccCCCHHH-HHHHHhcCCCeEEEEEECCCCcchH----HHHHHHHHHHHHC-CC
Confidence 9999999999999988754322 233444443 333333 344546778777654433 4557888888888 34
Q ss_pred cceEEEecCCCchhHHHHhCCCCCCCceEEEEeccCCccccCCCCCCHHHHHHHHHHHhcC
Q 014216 328 HYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLKSAFELEHIVEFVKEAGRG 388 (428)
Q Consensus 328 ~~~f~~id~~~~~~~~~~~gl~~~~~P~~~i~~~~~~~~~~~~~~~~~~~i~~fi~~~~~g 388 (428)
+.|+.+|...++.+++.||+.. +|++++ + + +...+.|..+.++|.+||.+.+..
T Consensus 168 -v~~~~vd~~~~~~l~~~~~v~~--~Pt~~~-~--G-~~~~~~G~~~~~~l~~~l~~~~~~ 221 (229)
T 2ywm_A 168 -ITSKVIDASENQDLAEQFQVVG--VPKIVI-N--K-GVAEFVGAQPENAFLGYIMAVYEK 221 (229)
T ss_dssp -EEEEEEEGGGCHHHHHHTTCCS--SSEEEE-G--G-GTEEEESCCCHHHHHHHHHHHHHH
T ss_pred -eEEEEEECCCCHHHHHHcCCcc--cCEEEE-C--C-EEEEeeCCCCHHHHHHHHHHHhhh
Confidence 9999999988999999999986 999977 3 2 244477889999999999988643
No 36
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1.1e-19 Score=145.66 Aligned_cols=110 Identities=50% Similarity=0.909 Sum_probs=101.3
Q ss_pred CCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhc----CceEEEEEcCcccHhHHHHcCCccc
Q 014216 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK----GVATVAALDANEHQSLAQEYGIRGF 103 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~----~~v~~~~vd~~~~~~l~~~~~v~~~ 103 (428)
....+..++.++|...+..++++++|+||++||++|+++.|.|.++++.+. +.+.|+.||+++++.++++|+|.++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 84 (133)
T 1x5d_A 5 SSGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGF 84 (133)
T ss_dssp SCCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSS
T ss_pred CCCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCee
Confidence 456789999999996666778999999999999999999999999999987 7799999999999999999999999
Q ss_pred cEEEEEeCCCCCccccCCCCcchHHHHHHHHHHH
Q 014216 104 PTIKVFVPGKPPVDYQGARDVKPIAEFALQQIKA 137 (428)
Q Consensus 104 P~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l~~ 137 (428)
|++++|.+|+.+.+|.|.++.+.+.+|+.+.+..
T Consensus 85 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 85 PTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSD 118 (133)
T ss_dssp SEEEEEETTEEEEEECSCCSHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCceEEecCCCCHHHHHHHHHHHhhc
Confidence 9999999988788999999999999999988754
No 37
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.81 E-value=1.2e-19 Score=139.89 Aligned_cols=106 Identities=35% Similarity=0.706 Sum_probs=98.1
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEE
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~ 109 (428)
..+..++.++|...+..++++++|+||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|++.++|++++|
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEEEE
Confidence 46789999999976767889999999999999999999999999999998899999999999999999999999999999
Q ss_pred eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 110 VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
++|+.+.++.|..+.+.+.+++.+.+
T Consensus 82 ~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 82 KNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred eCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 99988888999999999999998764
No 38
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.81 E-value=1.6e-19 Score=145.98 Aligned_cols=114 Identities=22% Similarity=0.391 Sum_probs=105.6
Q ss_pred CCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEE
Q 014216 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (428)
Q Consensus 29 ~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~ 108 (428)
...+.+++.++|.+.+..++++++|+||++||++|+++.|.|.++++.+++++.|+.||++++++++++|+|.++|++++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 84 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFKF 84 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEEE
Confidence 46789999999997777889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCccccCCCCcchHHHHHHHHHHHHHHHh
Q 014216 109 FVPGKPPVDYQGARDVKPIAEFALQQIKALLKER 142 (428)
Q Consensus 109 ~~~g~~~~~~~g~~~~~~l~~~i~~~l~~~~~~~ 142 (428)
|.+|+.+.++.|..+.+.|.+|+.+.++......
T Consensus 85 ~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~ 118 (140)
T 3hz4_A 85 FCHGRPVWEQVGQIYPSILKNAVRDMLQHGEECI 118 (140)
T ss_dssp EETTEEEEEEESSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCcEEEEEcCCCCHHHHHHHHHHHhcccccCc
Confidence 9999888899999999999999999987665543
No 39
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.81 E-value=7.3e-20 Score=145.50 Aligned_cols=108 Identities=11% Similarity=0.158 Sum_probs=95.8
Q ss_pred cEEeCc-cchHHHhh-cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEE
Q 014216 32 VVQLTP-NNFKSKVL-NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (428)
Q Consensus 32 ~~~l~~-~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~ 109 (428)
+..++. ++|++.+. +++++++|.|||+||++|+.+.|.++++++++.+++.|+.||+|++++++++|+|++.||+++|
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fF 102 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFF 102 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEE
Confidence 556665 68886766 4789999999999999999999999999999998899999999999999999999999999999
Q ss_pred eCCCCC--c-------cccCCCC-cchHHHHHHHHHHHHH
Q 014216 110 VPGKPP--V-------DYQGARD-VKPIAEFALQQIKALL 139 (428)
Q Consensus 110 ~~g~~~--~-------~~~g~~~-~~~l~~~i~~~l~~~~ 139 (428)
++|+.+ . +..|... .+.|.++|...++.+.
T Consensus 103 k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a~ 142 (160)
T 2av4_A 103 YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRGAR 142 (160)
T ss_dssp ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHHH
T ss_pred ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHHhh
Confidence 999875 3 7889877 8899999998876654
No 40
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.80 E-value=5.5e-20 Score=144.77 Aligned_cols=104 Identities=11% Similarity=0.084 Sum_probs=98.1
Q ss_pred CcEEeCccchHHHhhcCCCeEEEEEECCC--ChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcccHhHHHHcCCccccEEE
Q 014216 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPW--CGHCQALTPIWEKAATVLKGV-ATVAALDANEHQSLAQEYGIRGFPTIK 107 (428)
Q Consensus 31 ~~~~l~~~~~~~~~~~~~~~~lv~f~~~~--C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~P~~~ 107 (428)
.+..+++++|++.+ .+++++||.||++| |++|+.+.|.++++++++.++ +.|++||.|++++++.+|||+++||++
T Consensus 18 g~~~~t~~~F~~~v-~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTli 96 (140)
T 2qgv_A 18 GWTPVSESRLDDWL-TQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATL 96 (140)
T ss_dssp TCEECCHHHHHHHH-HTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEE
T ss_pred CCccCCHHHHHHHH-hCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEE
Confidence 57799999999666 57889999999999 999999999999999999999 999999999999999999999999999
Q ss_pred EEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 108 VFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+|++|+.+.+..|..+.+.+.++|.+.+
T Consensus 97 lFk~G~~v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 97 VFTGGNYRGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEECCEEEEEEecCCCHHHHHHHHHHHh
Confidence 9999999999999999999999998876
No 41
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.80 E-value=2.2e-19 Score=138.51 Aligned_cols=106 Identities=31% Similarity=0.569 Sum_probs=98.1
Q ss_pred CCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEE
Q 014216 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (428)
Q Consensus 29 ~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~ 108 (428)
...+..++.++|+ .++.++++++|+||++||++|+.+.|.+.++++.+++++.|+.+|+++++.++++|++.++|++++
T Consensus 3 ~~~v~~l~~~~~~-~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 81 (109)
T 3tco_A 3 EDVTLVLTEENFD-EVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLI 81 (109)
T ss_dssp CCCCEECCTTTHH-HHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCeEEEecHHHHH-HHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEEEE
Confidence 3568899999999 555679999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 109 FVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 109 ~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
|.+|+.+.++.|..+.+.+..++.+.+
T Consensus 82 ~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 82 FVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 999988889999999999999998764
No 42
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.80 E-value=2.4e-19 Score=140.66 Aligned_cols=108 Identities=29% Similarity=0.533 Sum_probs=99.6
Q ss_pred CCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEE
Q 014216 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~ 107 (428)
.+..+..++.++|.+.+.+++++++|+||++||++|+++.|.|.++++.+.+++.++.+|++++++++++|+|.++|+++
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 90 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVL 90 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred CceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccEEE
Confidence 45678899999999777778899999999999999999999999999999888999999999999999999999999999
Q ss_pred EEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 108 VFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+|++|+.+.++.|..+.+.+.+|+.+.+
T Consensus 91 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 91 AMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 9998987788999999999999998764
No 43
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.80 E-value=3.7e-19 Score=137.99 Aligned_cols=106 Identities=27% Similarity=0.529 Sum_probs=98.2
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEE
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~ 109 (428)
..+..++.++|...+.+++++++|.||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|++.++|+++++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 84 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVY 84 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEEEE
Confidence 45789999999877777789999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 110 VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
++|+.+.++.|..+.+.+.+++.+.+
T Consensus 85 ~~G~~~~~~~G~~~~~~l~~~l~~~l 110 (112)
T 1t00_A 85 QGGEVAKTIVGAKPKAAIVRDLEDFI 110 (112)
T ss_dssp ETTEEEEEEESCCCHHHHHHHTHHHH
T ss_pred eCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99988888999999999999998765
No 44
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.80 E-value=2.3e-19 Score=137.66 Aligned_cols=103 Identities=34% Similarity=0.590 Sum_probs=95.8
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEE
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~ 109 (428)
..+.+++.++|+..+ ++++++|+||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|++.++|+++++
T Consensus 3 ~~v~~l~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (106)
T 3die_A 3 MAIVKVTDADFDSKV--ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVF 80 (106)
T ss_dssp CCCEECCTTTHHHHS--CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEEEE
T ss_pred cceEECCHHHHHHHh--cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEEEE
Confidence 468899999999555 899999999999999999999999999999998899999999999999999999999999999
Q ss_pred eCCCCCccccCCCCcchHHHHHHHH
Q 014216 110 VPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
++|+.+.++.|..+.+.+.+++.+.
T Consensus 81 ~~G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 81 KDGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHTT
T ss_pred eCCeEEEEEeCCCCHHHHHHHHHHh
Confidence 9998888999999999999998753
No 45
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.80 E-value=2.7e-19 Score=137.55 Aligned_cols=105 Identities=26% Similarity=0.529 Sum_probs=96.8
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEE
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~ 109 (428)
..+..++.++|...+..++++++|+||++||++|+.+.|.+.++++.+++++.++.+|+++++.++++|++.++|++++|
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEEEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEEEE
Confidence 45889999999966667889999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCCCCccccCCCCcchHHHHHHHH
Q 014216 110 VPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
++|+.+.++.|..+.+.+.+|+.+.
T Consensus 82 ~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 82 RDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred eCCEEEEEecCCCCHHHHHHHHHhc
Confidence 9998888899999999999998753
No 46
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.79 E-value=3e-19 Score=141.89 Aligned_cols=106 Identities=34% Similarity=0.672 Sum_probs=98.2
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEE
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~ 109 (428)
..+..++.++|...+..++++++|+||++||++|+++.|.+.++++.+++++.|+.||++++++++++|+|.++|++++|
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 101 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 101 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEEEE
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 45889999999976767889999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 110 VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
.+|+.+.++.|..+.+.+.+|+.+.+
T Consensus 102 ~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 102 KNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred eCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 98988888999999999999998764
No 47
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.79 E-value=2.3e-17 Score=160.69 Aligned_cols=212 Identities=23% Similarity=0.373 Sum_probs=152.5
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcC---CeEEEEEeCCC--chhHhhhcCCCc
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG---KVKLGHVDCDS--EKSLMSKFNVQG 232 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~---~~~f~~v~~~~--~~~~~~~~~v~~ 232 (428)
....+..++.+++...+.+.+++++|.||++||++|+.+.+.|.++++.+.+ .+.|+.|||+. +.++|++|+|.+
T Consensus 10 ~~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~ 89 (519)
T 3t58_A 10 SSDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG 89 (519)
T ss_dssp TTSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS
T ss_pred CCCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc
Confidence 4567999999999998877788999999999999999999999999999987 79999999964 789999999999
Q ss_pred CcEEEEEcCC---CCCcccccCCCCHHHHHHHHHHHHhhcCC-----CCcceecCchhhhhhhcC-CCCeEEEEecCCcc
Q 014216 233 FPTILVFGAD---KDSPIPYEGARTAGAIESFALEQLETNVA-----PPEVTELTSQDVMEEKCG-SAAICFVSFLPDIL 303 (428)
Q Consensus 233 ~P~i~~~~~~---~~~~~~y~g~~~~~~i~~fi~~~~~~~~~-----~~~v~~l~~~~~~~~~~~-~~~~~vi~f~~~~~ 303 (428)
+|++++|+.+ +.....+.|..+.+.|.+++.+.+..... .|.+..++..+....+.. .....+++|.+..
T Consensus 90 ~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~- 168 (519)
T 3t58_A 90 FPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFERED- 168 (519)
T ss_dssp BSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTT-
T ss_pred cCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCc-
Confidence 9999999853 22345667889999999999998865431 133445554444333322 2345566664331
Q ss_pred chhhhchhHHHHHHHHHHHHhhcCc-ceEEEecCCCchhHHHHhCCCCCCCceEEEEeccCCccccCCC-CCCHHHHHHH
Q 014216 304 DSKAEGRNKYLEMLLSVAEKFKRGH-YSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLKS-AFELEHIVEF 381 (428)
Q Consensus 304 ~~~~~~~~~~~~~~~~~a~~~~~~~-~~f~~id~~~~~~~~~~~gl~~~~~P~~~i~~~~~~~~~~~~~-~~~~~~i~~f 381 (428)
. ...+.++..+.... +.+..+.. ....++++||++. +|+++++..++... .+.- .-+.+.+..+
T Consensus 169 ---s-------~~~~~~~ldl~~~~~v~v~~v~~-~~~~l~~kfgV~~--~Pslvl~~~nGk~~-~~~v~~~~r~~~~~~ 234 (519)
T 3t58_A 169 ---S-------YLGREVTLDLSQYHAVAVRRVLN-TESDLVNKFGVTD--FPSCYLLLRNGSVS-RVPVLVESRSFYTSY 234 (519)
T ss_dssp ---C-------CHHHHHHHHTTTCTTEEEEEEET-TCHHHHHHHTCCC--SSEEEEEETTSCEE-ECCCSSCSHHHHHHH
T ss_pred ---h-------HHHHHHHHHhhccCCeeEEEecC-chHHHHHHcCCCC--CCeEEEEeCCCcee-ecccccccHHHHHHH
Confidence 1 24556666776543 66665544 4578999999996 89999998665432 2221 1223445555
Q ss_pred HHH
Q 014216 382 VKE 384 (428)
Q Consensus 382 i~~ 384 (428)
+.+
T Consensus 235 l~~ 237 (519)
T 3t58_A 235 LRG 237 (519)
T ss_dssp HTT
T ss_pred HHH
Confidence 554
No 48
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.79 E-value=3.9e-19 Score=136.66 Aligned_cols=104 Identities=34% Similarity=0.575 Sum_probs=96.2
Q ss_pred CcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEe
Q 014216 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV 110 (428)
Q Consensus 31 ~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~ 110 (428)
++..++.++|...+..++++++|.||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|++.++|++++++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFK 81 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEEES
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEEEe
Confidence 47789999999666677899999999999999999999999999999888999999999999999999999999999999
Q ss_pred CCCCCccccCCCCcchHHHHHHHH
Q 014216 111 PGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 111 ~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
+|+.+.++.|..+.+.+.+++.+.
T Consensus 82 ~G~~~~~~~G~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 82 GGKKCETIIGAVPKATIVQTVEKY 105 (107)
T ss_dssp SSSEEEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCHHHHHHHHHHH
Confidence 898888899999999999998865
No 49
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.79 E-value=6e-19 Score=137.44 Aligned_cols=106 Identities=25% Similarity=0.499 Sum_probs=98.6
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEE
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~ 109 (428)
..+.+++.++|...+..++++++|+||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|++.++|++++|
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 86 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRLV 86 (115)
T ss_dssp CSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEEEE
T ss_pred CceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEEEE
Confidence 45889999999976667789999999999999999999999999999998899999999999999999999999999999
Q ss_pred eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 110 VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
++|+.+.++.|..+.+.+.+|+.+.+
T Consensus 87 ~~G~~~~~~~g~~~~~~l~~~l~~~l 112 (115)
T 1thx_A 87 KGEQILDSTEGVISKDKLLSFLDTHL 112 (115)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred cCCEEEEEecCCCCHHHHHHHHHHHh
Confidence 99988788999999999999998775
No 50
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.79 E-value=4.7e-19 Score=139.72 Aligned_cols=107 Identities=31% Similarity=0.629 Sum_probs=97.4
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEE
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~ 109 (428)
..+..++.++|...+..++++++|+||++||++|+++.|.|.++++.+.+++.|+.||++++++++++|+|.++|++++|
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 82 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLY 82 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEEEE
Confidence 45889999999767777889999999999999999999999999999998899999999999999999999999999999
Q ss_pred eCCCCCccccCC----CCcchHHHHHHHHHH
Q 014216 110 VPGKPPVDYQGA----RDVKPIAEFALQQIK 136 (428)
Q Consensus 110 ~~g~~~~~~~g~----~~~~~l~~~i~~~l~ 136 (428)
.+|+.+.++.|. .+.+.+.+|+.+.++
T Consensus 83 ~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 83 QYERAKKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEGGGTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred eCCCccceeeccccCcCCHHHHHHHHHHHHH
Confidence 877667778776 799999999988764
No 51
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.79 E-value=3e-19 Score=139.40 Aligned_cols=105 Identities=19% Similarity=0.412 Sum_probs=92.9
Q ss_pred CCCCcEEeCccchHHHhhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEE
Q 014216 28 SSSPVVQLTPNNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTI 106 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~ 106 (428)
........+.++|++.+.. ++++++|+||++||++|+++.|.|.++++.+++ +.|+.||++++++++++|+|.++|++
T Consensus 10 ~~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt~ 88 (116)
T 3qfa_C 10 HGSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSMPTF 88 (116)
T ss_dssp --CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred CCcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCccccEE
Confidence 3455667888999954432 789999999999999999999999999999888 99999999999999999999999999
Q ss_pred EEEeCCCCCccccCCCCcchHHHHHHHH
Q 014216 107 KVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 107 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
++|++|+.+.++.|. +.+.|.+++.+.
T Consensus 89 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 89 QFFKKGQKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp EEESSSSEEEEEESC-CHHHHHHHHHHH
T ss_pred EEEeCCeEEEEEcCC-CHHHHHHHHHHh
Confidence 999999888889998 999999998765
No 52
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.78 E-value=4.3e-19 Score=137.63 Aligned_cols=103 Identities=26% Similarity=0.575 Sum_probs=95.3
Q ss_pred CcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEe
Q 014216 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV 110 (428)
Q Consensus 31 ~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~ 110 (428)
++.+++.++|++.+ ++++++|+||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|+|.++|++++|+
T Consensus 2 ~v~~l~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 79 (112)
T 2voc_A 2 AIVKATDQSFSAET--SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLK 79 (112)
T ss_dssp CCEECCTTTHHHHH--SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEEEE
T ss_pred CeEEecHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEe
Confidence 46789999999555 8899999999999999999999999999999888999999999999999999999999999999
Q ss_pred CCCCCccccCCCCcchHHHHHHHHH
Q 014216 111 PGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 111 ~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+|+.+.++.|..+.+.+.+|+.+.+
T Consensus 80 ~G~~~~~~~G~~~~~~l~~~l~~~~ 104 (112)
T 2voc_A 80 DGEVVETSVGFKPKEALQELVNKHL 104 (112)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHTTS
T ss_pred CCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 9988888999999999999998663
No 53
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.78 E-value=3.8e-19 Score=136.20 Aligned_cols=102 Identities=29% Similarity=0.607 Sum_probs=94.2
Q ss_pred cEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEeC
Q 014216 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVP 111 (428)
Q Consensus 32 ~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~ 111 (428)
+.++++++|. .+..++++++|+||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|++.++|+++++++
T Consensus 2 v~~l~~~~~~-~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 80 (105)
T 1nsw_A 2 TMTLTDANFQ-QAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKG 80 (105)
T ss_dssp CEEECTTTHH-HHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ceeccHHhHH-HHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEEeC
Confidence 6789999999 777788999999999999999999999999999998889999999999999999999999999999999
Q ss_pred CCCCccccCCCCcchHHHHHHHH
Q 014216 112 GKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 112 g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
|+.+.++.|..+.+.+.+++.+.
T Consensus 81 G~~~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 81 GRPVKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp TEEEEEEESCCCHHHHHHHTTTT
T ss_pred CeEEEEEecCCCHHHHHHHHHHH
Confidence 98778899999999888888654
No 54
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.78 E-value=7.6e-19 Score=134.47 Aligned_cols=103 Identities=28% Similarity=0.558 Sum_probs=95.1
Q ss_pred cEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEeC
Q 014216 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVP 111 (428)
Q Consensus 32 ~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~ 111 (428)
+.+++.++|...+..++++++|+||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|++.++|+++++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 81 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKN 81 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEEeC
Confidence 56889999996666678999999999999999999999999999999889999999999999999999999999999999
Q ss_pred CCCCccccCCCCcchHHHHHHHH
Q 014216 112 GKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 112 g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
|+.+.++.|..+.+.+.+++.+.
T Consensus 82 g~~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 82 GERKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp TEEEEEEEECCCHHHHHHHHHHH
T ss_pred CeEEEEEecCCCHHHHHHHHHhh
Confidence 98888899999999999998764
No 55
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.78 E-value=9.4e-19 Score=141.54 Aligned_cols=105 Identities=38% Similarity=0.724 Sum_probs=97.1
Q ss_pred CCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc---eEEEEEcCcccHhHHHHcCCccccE
Q 014216 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV---ATVAALDANEHQSLAQEYGIRGFPT 105 (428)
Q Consensus 29 ~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---v~~~~vd~~~~~~l~~~~~v~~~P~ 105 (428)
...+..++.++|+ .++.++++++|+||++||++|+++.|.|.++++.+.+. +.|+.||++++..++++|+|.++|+
T Consensus 16 ~~~v~~l~~~~~~-~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 94 (140)
T 2dj1_A 16 ENGVWVLNDGNFD-NFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPT 94 (140)
T ss_dssp ETTEEECCTTTHH-HHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSE
T ss_pred CCCCEEcChHhHH-HHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCe
Confidence 4678999999999 45567899999999999999999999999999999875 9999999999999999999999999
Q ss_pred EEEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 106 IKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 106 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+++|++|+ +.+|.|..+.+.|.+|+.+.+
T Consensus 95 ~~~~~~G~-~~~~~g~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 95 IKILKKGQ-AVDYDGSRTQEEIVAKVREVS 123 (140)
T ss_dssp EEEEETTE-EEECCSCCCHHHHHHHHHHHH
T ss_pred EEEEECCc-EEEcCCCCCHHHHHHHHHHhc
Confidence 99999988 789999999999999999876
No 56
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.78 E-value=1.2e-18 Score=134.71 Aligned_cols=104 Identities=36% Similarity=0.810 Sum_probs=94.5
Q ss_pred CCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhc---CceEEEEEcCcccHhHHHHcCCccccE
Q 014216 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK---GVATVAALDANEHQSLAQEYGIRGFPT 105 (428)
Q Consensus 29 ~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~---~~v~~~~vd~~~~~~l~~~~~v~~~P~ 105 (428)
...+..++.++|++.+ . +++++|+||++||++|+++.|.+.++++.+. ..+.++.+|++++++++++|+|.++|+
T Consensus 4 ~~~v~~l~~~~~~~~~-~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt 81 (111)
T 3uvt_A 4 GSTVLALTENNFDDTI-A-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPT 81 (111)
T ss_dssp -CCSEECCTTTHHHHH-H-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCcceEcChhhHHHHh-c-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccE
Confidence 4578999999999655 3 8899999999999999999999999999876 359999999999999999999999999
Q ss_pred EEEEeCCCCCccccCCCCcchHHHHHHHH
Q 014216 106 IKVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 106 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
+++|++|+.+.++.|..+.+.+.+|+.+.
T Consensus 82 ~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 82 LLLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred EEEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 99999998888999999999999999764
No 57
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.78 E-value=2.1e-18 Score=140.83 Aligned_cols=107 Identities=24% Similarity=0.536 Sum_probs=99.8
Q ss_pred CCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEE
Q 014216 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (428)
Q Consensus 29 ~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~ 108 (428)
...+..++.++|... +.++++++|+||++||++|+++.|.|.++++.+.+++.|+.||+++++.++++|+|.++|++++
T Consensus 37 ~~~v~~l~~~~~~~~-~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 115 (148)
T 3p2a_A 37 DGEVINATAETLDKL-LQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTIML 115 (148)
T ss_dssp CCCCEECCTTTHHHH-TTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cCCceecCHHHHHHH-HhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCccCEEEE
Confidence 467899999999954 4789999999999999999999999999999998889999999999999999999999999999
Q ss_pred EeCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 109 FVPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 109 ~~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
|++|+.+.++.|..+.+.|.+|+.+.+.
T Consensus 116 ~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 116 YRNGKMIDMLNGAVPKAPFDNWLDEQLS 143 (148)
T ss_dssp EETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred EECCeEEEEEeCCCCHHHHHHHHHHHhc
Confidence 9999888899999999999999998864
No 58
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.78 E-value=1.1e-18 Score=141.29 Aligned_cols=108 Identities=25% Similarity=0.508 Sum_probs=95.3
Q ss_pred CCCCcEEeCccchHHHhhc-----------CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHH
Q 014216 28 SSSPVVQLTPNNFKSKVLN-----------ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQ 96 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~-----------~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~ 96 (428)
....+..++.++|...+.. ++++++|+||++||++|+.+.|.|.++++.+++++.++.||+++++++++
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 99 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELAR 99 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHH
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHHH
Confidence 4567899999999966654 47899999999999999999999999999999889999999999999999
Q ss_pred HcCCccccEEEEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 97 EYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 97 ~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+|+|.++|++++|..++.+.++.|..+.+.|.++|.+.+
T Consensus 100 ~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~~l~~~l~~~l 138 (141)
T 3hxs_A 100 DFGIQSIPTIWFVPMKGEPQVNMGALSKEQLKGYIDKVL 138 (141)
T ss_dssp HTTCCSSSEEEEECSSSCCEEEESCCCHHHHHHHHHHTT
T ss_pred HcCCCCcCEEEEEeCCCCEEEEeCCCCHHHHHHHHHHHH
Confidence 999999999999955545569999999999999998764
No 59
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.78 E-value=1.1e-18 Score=143.39 Aligned_cols=106 Identities=27% Similarity=0.580 Sum_probs=98.0
Q ss_pred CCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEE
Q 014216 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (428)
Q Consensus 29 ~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~ 108 (428)
...+.+++..+|...+ .++++++|+||++||++|+.+.|.|+++++.+.+++.|+.||++++++++++|+|+++|++++
T Consensus 46 ~~~~~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 124 (155)
T 2ppt_A 46 TGKVAGIDPAILARAE-RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFIL 124 (155)
T ss_dssp CSSEEECCHHHHHHHT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEEEE
T ss_pred CCCCccCCHHHHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEEEE
Confidence 3457899999999555 778999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 109 FVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 109 ~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
|++|+.+.++.|..+.+.|.+|+.+.+
T Consensus 125 ~~~G~~~~~~~G~~~~~~l~~~l~~~l 151 (155)
T 2ppt_A 125 FHKGRELARAAGARPASELVGFVRGKL 151 (155)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EeCCeEEEEecCCCCHHHHHHHHHHHh
Confidence 999988888999999999999999876
No 60
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.77 E-value=5.7e-18 Score=134.41 Aligned_cols=108 Identities=20% Similarity=0.471 Sum_probs=97.4
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhc-----CCeEEEEEeCCCchhHhhhcCCCc
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK-----GKVKLGHVDCDSEKSLMSKFNVQG 232 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~-----~~~~f~~v~~~~~~~~~~~~~v~~ 232 (428)
..+.+..++.+++.+.+.+.+++++|.||++||++|+.+.+.|.++|+.+. +.+.|+.|||+.+++++++|+|++
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 92 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG 92 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS
T ss_pred CCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc
Confidence 467899999999999887678899999999999999999999999998764 469999999999999999999999
Q ss_pred CcEEEEEcCCCCC-cccccCCCCHHHHHHHHHHH
Q 014216 233 FPTILVFGADKDS-PIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 233 ~P~i~~~~~~~~~-~~~y~g~~~~~~i~~fi~~~ 265 (428)
+|++++|+.++.. +..|.|..+.+.|.+|+.++
T Consensus 93 ~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 93 FPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999999876543 37899999999999999875
No 61
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.77 E-value=9.8e-19 Score=134.76 Aligned_cols=104 Identities=30% Similarity=0.562 Sum_probs=96.3
Q ss_pred CcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEe
Q 014216 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV 110 (428)
Q Consensus 31 ~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~ 110 (428)
.+.+++.++|. .++.++++++|+||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|++.++|++++|.
T Consensus 2 ~v~~l~~~~~~-~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (109)
T 2yzu_A 2 KPIEVTDQNFD-ETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVILFK 80 (109)
T ss_dssp CCEECCTTTHH-HHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred cceEccHhHHH-HHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEEEe
Confidence 46789999999 66678899999999999999999999999999999988999999999999999999999999999999
Q ss_pred CCCCCccccCCCCcchHHHHHHHHH
Q 014216 111 PGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 111 ~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+|+.+.++.|..+.+.+.+|+.+.+
T Consensus 81 ~g~~~~~~~g~~~~~~l~~~l~~~l 105 (109)
T 2yzu_A 81 DGQPVEVLVGAQPKRNYQAKIEKHL 105 (109)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred CCcEeeeEeCCCCHHHHHHHHHHHh
Confidence 8987788999999999999998764
No 62
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.77 E-value=3.3e-18 Score=137.49 Aligned_cols=107 Identities=32% Similarity=0.596 Sum_probs=96.1
Q ss_pred CCCCcEEeCccchHHHhhc-----------CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHH
Q 014216 28 SSSPVVQLTPNNFKSKVLN-----------ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQ 96 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~-----------~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~ 96 (428)
....+..++.++|...+.. ++++++|+||++||++|+++.|.|.++++.+++++.++.||+++++++++
T Consensus 7 ~~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~ 86 (136)
T 2l5l_A 7 GNGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAG 86 (136)
T ss_dssp CTTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHH
T ss_pred cCCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHH
Confidence 3456889999999966653 46899999999999999999999999999999889999999999999999
Q ss_pred HcCCccccEEEEE-eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 97 EYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 97 ~~~v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+|+|.++|++++| .+|+.+ .+.|..+.+.|.++|.+.+
T Consensus 87 ~~~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~ 125 (136)
T 2l5l_A 87 AFGIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFL 125 (136)
T ss_dssp HTTCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHh
Confidence 9999999999999 677754 8899999999999998875
No 63
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.77 E-value=2.1e-18 Score=131.61 Aligned_cols=102 Identities=28% Similarity=0.544 Sum_probs=93.9
Q ss_pred cEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEeC
Q 014216 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVP 111 (428)
Q Consensus 32 ~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~ 111 (428)
+.+++.++|++.+ .++++++|+||++||++|+.+.|.+.++++.+++ +.++.+|++++++++++|++.++|+++++++
T Consensus 1 V~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 78 (104)
T 2e0q_A 1 VIHLDSKNFDSFL-ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSLPTVIFFKD 78 (104)
T ss_dssp CEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSCEEEEEET
T ss_pred CeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHHHHHhCCccccCEEEEEEC
Confidence 4678999999544 6789999999999999999999999999999988 9999999999999999999999999999999
Q ss_pred CCCCccccCCCCcchHHHHHHHHH
Q 014216 112 GKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 112 g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
|+.+.++.|..+.+.+.+|+.+.+
T Consensus 79 g~~~~~~~g~~~~~~l~~~l~~~l 102 (104)
T 2e0q_A 79 GEPVDEIIGAVPREEIEIRIKNLL 102 (104)
T ss_dssp TEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CeEhhhccCCCCHHHHHHHHHHHh
Confidence 987788999999999999998775
No 64
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.76 E-value=2.6e-18 Score=148.94 Aligned_cols=111 Identities=27% Similarity=0.695 Sum_probs=101.8
Q ss_pred ccCCCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCcccc
Q 014216 25 LYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFP 104 (428)
Q Consensus 25 ~~~~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 104 (428)
.+.....+..++.++|...+ .++++++|+||++||++|+.+.|.|.++++.+++.+.|+.|||++++.+|++|+|.++|
T Consensus 92 ~~~~~~~v~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 170 (210)
T 3apq_A 92 IYDDDPEIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYP 170 (210)
T ss_dssp TTTTCTTSEECCHHHHHHHH-HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSS
T ss_pred ccCCCCceEEecHHHHHHHH-ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCC
Confidence 34456678999999999544 77899999999999999999999999999999988999999999999999999999999
Q ss_pred EEEEEeCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 105 TIKVFVPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 105 ~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
++++|.+|+.+.++.|..+.+.|.+|+.+.++
T Consensus 171 t~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~ 202 (210)
T 3apq_A 171 SLFIFRSGMAAVKYNGDRSKESLVAFAMQHVR 202 (210)
T ss_dssp EEEEECTTSCCEECCSCCCHHHHHHHHHHHHH
T ss_pred eEEEEECCCceeEecCCCCHHHHHHHHHHhCc
Confidence 99999999888999999999999999998874
No 65
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.76 E-value=2.4e-18 Score=132.59 Aligned_cols=104 Identities=27% Similarity=0.482 Sum_probs=92.3
Q ss_pred CCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEE
Q 014216 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~ 107 (428)
.+......+.++|+ .++.++++++|+||++||++|+++.|.+.++++.+++ +.|+.+|+++++.++++|+|.++|+++
T Consensus 5 ~~~~~~~~~~~~f~-~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 82 (109)
T 3f3q_A 5 HHMVTQFKTASEFD-SAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELGDVAQKNEVSAMPTLL 82 (109)
T ss_dssp CCCCEECCSHHHHH-HHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred cccccCCCCHHHHH-HHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCCccCEEE
Confidence 34555677788898 5667799999999999999999999999999999876 899999999999999999999999999
Q ss_pred EEeCCCCCccccCCCCcchHHHHHHHH
Q 014216 108 VFVPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
+|.+|+.+.++.|. +.+.|.+++.+.
T Consensus 83 ~~~~G~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 83 LFKNGKEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred EEECCEEEEEEeCC-CHHHHHHHHHhh
Confidence 99999888888898 668888888764
No 66
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.76 E-value=2.6e-18 Score=135.21 Aligned_cols=107 Identities=30% Similarity=0.542 Sum_probs=97.3
Q ss_pred CCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEE
Q 014216 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~ 107 (428)
....+..++.++|...+..++++++|+||++||++|+.+.|.+.++++.+++.+.|+.+|+++++.++++|+|.++|+++
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 89 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLI 89 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEEE
Confidence 35678999999999777778899999999999999999999999999999888999999999999999999999999999
Q ss_pred EEeCCCCCccccCCCCcchHHHHHHHH
Q 014216 108 VFVPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
++++|+.+.++.|..+.+.+.+++.+.
T Consensus 90 ~~~~g~~~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 90 LFKDGQPVKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHTCSC
T ss_pred EEECCEEEEEecCCCCHHHHHHHHHHH
Confidence 999998888899999999998888654
No 67
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.76 E-value=5.1e-18 Score=140.06 Aligned_cols=107 Identities=16% Similarity=0.340 Sum_probs=92.7
Q ss_pred CCCcEEeCccchHHHhhc-CCCeEEEEEEC-------CCChhhhhhhHHHHHHHHHhc-----CceEEEEEcCcccHhHH
Q 014216 29 SSPVVQLTPNNFKSKVLN-ANGVVLVEFYA-------PWCGHCQALTPIWEKAATVLK-----GVATVAALDANEHQSLA 95 (428)
Q Consensus 29 ~~~~~~l~~~~~~~~~~~-~~~~~lv~f~~-------~~C~~C~~~~~~~~~~~~~~~-----~~v~~~~vd~~~~~~l~ 95 (428)
...++.+|+++|++.+.. .+.++||+||| +||++|+.+.|+|+++++.+. +++.|++||++++++++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 467999999999954433 35689999999 499999999999999999998 88999999999999999
Q ss_pred HHcCCccccEEEEEeCCCCC------------ccc---cC-CCCcchHHHHHHHHH
Q 014216 96 QEYGIRGFPTIKVFVPGKPP------------VDY---QG-ARDVKPIAEFALQQI 135 (428)
Q Consensus 96 ~~~~v~~~P~~~~~~~g~~~------------~~~---~g-~~~~~~l~~~i~~~l 135 (428)
++|||+++||+++|++|+.. ..| .| .++++.|.+||.+.+
T Consensus 97 ~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t 152 (178)
T 3ga4_A 97 KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKIL 152 (178)
T ss_dssp HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhc
Confidence 99999999999999988642 234 24 788999999999875
No 68
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.76 E-value=8e-18 Score=130.18 Aligned_cols=105 Identities=27% Similarity=0.455 Sum_probs=92.3
Q ss_pred CCCcEEeCccchHHHhhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCc-ccHhHHHHcCCccccEE
Q 014216 29 SSPVVQLTPNNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN-EHQSLAQEYGIRGFPTI 106 (428)
Q Consensus 29 ~~~~~~l~~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~-~~~~l~~~~~v~~~P~~ 106 (428)
...+..++.++|...+.. ++++++|+||++||++|+.+.|.+.++++.+++ +.|+.+|++ ++++++++|++.++|++
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~~~~~~~~v~~~Pt~ 82 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVPTF 82 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSBSSEE
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcchHHHHHHcCCCeeeEE
Confidence 456889999999965543 588999999999999999999999999999886 899999998 78999999999999999
Q ss_pred EEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 107 KVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 107 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+++++|+.+.++.|.. .+.+.+++.+.+
T Consensus 83 ~~~~~G~~~~~~~G~~-~~~l~~~l~~~~ 110 (111)
T 2pu9_C 83 KILKENSVVGEVTGAK-YDKLLEAIQAAR 110 (111)
T ss_dssp EEESSSSEEEEEESSC-HHHHHHHHHHHH
T ss_pred EEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 9999998877888874 788888887653
No 69
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.76 E-value=9e-19 Score=137.52 Aligned_cols=108 Identities=43% Similarity=0.787 Sum_probs=97.0
Q ss_pred CCCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC---ceEEEEEcCcccHhHHHHcCCccc
Q 014216 27 GSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG---VATVAALDANEHQSLAQEYGIRGF 103 (428)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~ 103 (428)
.....+..++.++|+ .++.++++++|+||++||++|+++.|.+.++++.+.+ .+.++.+|+++++.++++|+++++
T Consensus 4 ~~~~~v~~l~~~~~~-~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~ 82 (120)
T 1mek_A 4 EEEDHVLVLRKSNFA-EALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGY 82 (120)
T ss_dssp CEETTEEECCTTTHH-HHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSS
T ss_pred cCCCCcEEechhhHH-HHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcc
Confidence 345678999999999 5556789999999999999999999999999999873 589999999999999999999999
Q ss_pred cEEEEEeCCCCC--ccccCCCCcchHHHHHHHHH
Q 014216 104 PTIKVFVPGKPP--VDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 104 P~~~~~~~g~~~--~~~~g~~~~~~l~~~i~~~l 135 (428)
|++++|++|+.+ .+|.|..+.+.+.+|+.+.+
T Consensus 83 Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 83 PTIKFFRNGDTASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp SEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTS
T ss_pred cEEEEEeCCCcCCcccccCccCHHHHHHHHHhcc
Confidence 999999999876 88999999999999998653
No 70
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.75 E-value=4.8e-19 Score=139.59 Aligned_cols=105 Identities=35% Similarity=0.704 Sum_probs=90.7
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEECCCCh--------------hhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHH
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCG--------------HCQALTPIWEKAATVLKGVATVAALDANEHQSLA 95 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~--------------~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~ 95 (428)
..+.+++.++|...+.+++++++|+||++||+ +|+.+.|.+.++++.+++++.++.+|++++++++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~ 82 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 82 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTG
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHH
Confidence 45889999999977777899999999999999 9999999999999999888999999999999999
Q ss_pred HHcCCccccEEEEEeCCCCCccccCCCCcchHHHHHHHH
Q 014216 96 QEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 96 ~~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
++|+|+++|++++|++|+.+.++.|..+.+.+.+++.+.
T Consensus 83 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 83 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp GGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTT
T ss_pred HHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHH
Confidence 999999999999999998888899999999999988654
No 71
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.75 E-value=6e-19 Score=135.09 Aligned_cols=97 Identities=14% Similarity=0.171 Sum_probs=77.4
Q ss_pred CccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEeCCCCC
Q 014216 36 TPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPP 115 (428)
Q Consensus 36 ~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~g~~~ 115 (428)
+.++|+ .++.++++++|+||++||++|+.+.|.+.++++.++ ++.++.||++++++++++|+|.++|++++|++|+.+
T Consensus 7 ~~~~~~-~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 84 (105)
T 4euy_A 7 TIEELA-TYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEI 84 (105)
T ss_dssp ---CCS-SSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC---------CCCCEEEEEETTEEE
T ss_pred CHHHHH-HHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEE
Confidence 345677 445678999999999999999999999999999985 599999999999999999999999999999999888
Q ss_pred ccccCCCCcchHHHHHHHH
Q 014216 116 VDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 116 ~~~~g~~~~~~l~~~i~~~ 134 (428)
.++.|..+.+.+.+++.+.
T Consensus 85 ~~~~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 85 LRESRFISLENLERTIQLF 103 (105)
T ss_dssp EEEESSCCHHHHHHHHHTT
T ss_pred EEEeCCcCHHHHHHHHHHh
Confidence 8999999999999998764
No 72
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=2.4e-18 Score=137.78 Aligned_cols=108 Identities=33% Similarity=0.674 Sum_probs=95.2
Q ss_pred CCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhc--CceEEEEEcCcccHhHHHHcCCccccE
Q 014216 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK--GVATVAALDANEHQSLAQEYGIRGFPT 105 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~--~~v~~~~vd~~~~~~l~~~~~v~~~P~ 105 (428)
....+..++.++|...+..++++++|+||++||++|+++.|.|.++++.+. +.+.|+.+|++++..++++|+|.++|+
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 84 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPT 84 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSE
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCE
Confidence 456799999999996555568999999999999999999999999999998 469999999999999999999999999
Q ss_pred EEEEeCCCCCc--ccc-CCCCcchHHHHHHHHH
Q 014216 106 IKVFVPGKPPV--DYQ-GARDVKPIAEFALQQI 135 (428)
Q Consensus 106 ~~~~~~g~~~~--~~~-g~~~~~~l~~~i~~~l 135 (428)
+++|.+|+.+. .|. |.++.+.|.+||.+.+
T Consensus 85 ~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~ 117 (133)
T 2dj3_A 85 IYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHA 117 (133)
T ss_dssp EEEECTTCTTSCEECCSSCCSTTHHHHHHHHHS
T ss_pred EEEEeCCCcccceEecCCCcCHHHHHHHHHHhc
Confidence 99998876533 577 6689999999998875
No 73
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.75 E-value=5.8e-18 Score=131.20 Aligned_cols=104 Identities=21% Similarity=0.501 Sum_probs=91.8
Q ss_pred CcEEeC-ccchHHHhhc-C--CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEE
Q 014216 31 PVVQLT-PNNFKSKVLN-A--NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTI 106 (428)
Q Consensus 31 ~~~~l~-~~~~~~~~~~-~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~ 106 (428)
.+..++ .++|++.+.. . +++++|+||++||++|+.+.|.|.++++.+++.+.|+.+|++++++++++|++.++|++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 82 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTF 82 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEE
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEE
Confidence 467774 5788854432 2 89999999999999999999999999999987899999999999999999999999999
Q ss_pred EEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 107 KVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 107 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+++++|+.+.++.|. +.+.+.+++.+.+
T Consensus 83 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 110 (112)
T 1ep7_A 83 HVYKDGVKADDLVGA-SQDKLKALVAKHA 110 (112)
T ss_dssp EEEETTEEEEEEESC-CHHHHHHHHHHHH
T ss_pred EEEECCeEEEEEcCC-CHHHHHHHHHHHh
Confidence 999999887888998 8889999998765
No 74
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.75 E-value=6.7e-18 Score=133.34 Aligned_cols=103 Identities=21% Similarity=0.369 Sum_probs=92.9
Q ss_pred CcEEeCc-cchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEE
Q 014216 31 PVVQLTP-NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (428)
Q Consensus 31 ~~~~l~~-~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~ 109 (428)
-+..+++ ++|++ ++.++++++|+||++||++|+.+.|.|.++++.++ .+.|+.||++++++++++|+|.++|++++|
T Consensus 20 mv~~l~~~~~f~~-~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~ 97 (125)
T 1r26_A 20 SVVDVYSVEQFRN-IMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNSEIVSKCRVLQLPTFIIA 97 (125)
T ss_dssp CCEEECCHHHHHH-HHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceEECCCHHHHHH-HHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHcCCCcccEEEEE
Confidence 3889999 99995 44788999999999999999999999999999985 499999999999999999999999999999
Q ss_pred eCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 110 VPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
.+|+.+.++.| .+.+.|.+++.+.++
T Consensus 98 ~~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 98 RSGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp ETTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred eCCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 99988788889 688889999987753
No 75
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.75 E-value=7.8e-18 Score=129.33 Aligned_cols=102 Identities=22% Similarity=0.348 Sum_probs=87.4
Q ss_pred cEEe-CccchHHHhh-cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEE
Q 014216 32 VVQL-TPNNFKSKVL-NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (428)
Q Consensus 32 ~~~l-~~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~ 109 (428)
+..+ +.++|++.+. .++++++|+||++||++|+++.|.+.++++.++ .+.|+.+|++++++++++|++.++|++++|
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP-QAVFLEVDVHQCQGTAATNNISATPTFQFF 81 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSSSEEEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHhcCCCcccEEEEE
Confidence 5566 4578885544 368999999999999999999999999999984 599999999999999999999999999999
Q ss_pred eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 110 VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
++|+.+.++.|... +.+.+++.+.+
T Consensus 82 ~~G~~~~~~~G~~~-~~l~~~l~~~l 106 (107)
T 1gh2_A 82 RNKVRIDQYQGADA-VGLEEKIKQHL 106 (107)
T ss_dssp ETTEEEEEEESSCH-HHHHHHHHHHH
T ss_pred ECCeEEEEEeCCCH-HHHHHHHHHhc
Confidence 99988888888544 55888887654
No 76
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.75 E-value=1.8e-17 Score=132.65 Aligned_cols=123 Identities=48% Similarity=0.925 Sum_probs=108.6
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhc----CCeEEEEEeCCCchhHhhhcCCCcC
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK----GKVKLGHVDCDSEKSLMSKFNVQGF 233 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~----~~~~f~~v~~~~~~~~~~~~~v~~~ 233 (428)
....+..++.+++.+.+...+++++|.||++||++|+.+.+.|.++++.+. +.+.|+.||++.+..++++|+|.++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 84 (133)
T 1x5d_A 5 SSGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGF 84 (133)
T ss_dssp SCCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSS
T ss_pred CCCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCee
Confidence 456789999999999877778899999999999999999999999999997 7899999999999999999999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhhcCCCCcceecCch
Q 014216 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQ 281 (428)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~ 281 (428)
|++++|++ +.....|.|..+.+.|.+|+.+.+......+.+.+++..
T Consensus 85 Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 131 (133)
T 1x5d_A 85 PTIKIFQK-GESPVDYDGGRTRSDIVSRALDLFSDNAPPPELLESGPS 131 (133)
T ss_dssp SEEEEEET-TEEEEEECSCCSHHHHHHHHHHHHHHHSCCSSCCCCCGG
T ss_pred CeEEEEeC-CCceEEecCCCCHHHHHHHHHHHhhccCCCccccccCCC
Confidence 99999986 445678899999999999999998877666666666543
No 77
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.75 E-value=6.1e-18 Score=134.09 Aligned_cols=104 Identities=35% Similarity=0.591 Sum_probs=93.1
Q ss_pred CCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcccHhHHHHcCCccccEE
Q 014216 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANEHQSLAQEYGIRGFPTI 106 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~P~~ 106 (428)
....+..++.++|++ +++ +.++|+||++||++|+++.|.|.++++.+.+ .+.|+.||++++..++++|+|.++|++
T Consensus 5 ~~~~v~~l~~~~f~~-~~~--~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 5 SSGNVRVITDENWRE-LLE--GDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTI 81 (126)
T ss_dssp CCCSEEECCTTTHHH-HTS--SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCCccEEecHHHHHH-HhC--CCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEE
Confidence 356789999999994 443 3499999999999999999999999999886 799999999999999999999999999
Q ss_pred EEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 107 KVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 107 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
++|++|+ +.++.|..+.+.+.+|+.+.+
T Consensus 82 ~~~~~G~-~~~~~G~~~~~~l~~~l~~~~ 109 (126)
T 1x5e_A 82 YHCKDGE-FRRYQGPRTKKDFINFISDKE 109 (126)
T ss_dssp EEEETTE-EEECCSCCCHHHHHHHHHTCG
T ss_pred EEEeCCe-EEEeecCCCHHHHHHHHHHHh
Confidence 9998887 588999999999999998764
No 78
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.75 E-value=8.5e-18 Score=132.42 Aligned_cols=104 Identities=18% Similarity=0.416 Sum_probs=93.7
Q ss_pred CCcEEeCccchHHHhhc---CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEE
Q 014216 30 SPVVQLTPNNFKSKVLN---ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTI 106 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~ 106 (428)
..+..++.++|+..+.. ++++++|+||++||++|+.+.|.|.++++.+++ +.|+.||++++++++++|++.++|++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~ 91 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKPIAEQFSVEAMPTF 91 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHcCCCcccEE
Confidence 44667788899966655 689999999999999999999999999999887 99999999999999999999999999
Q ss_pred EEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 107 KVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 107 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+++++|+.+.++.|.. .+.+.+++.+.+
T Consensus 92 ~~~~~G~~~~~~~G~~-~~~l~~~l~~~l 119 (122)
T 2vlu_A 92 LFMKEGDVKDRVVGAI-KEELTAKVGLHA 119 (122)
T ss_dssp EEEETTEEEEEEESSC-HHHHHHHHHHHH
T ss_pred EEEeCCEEEEEEeCcC-HHHHHHHHHHHh
Confidence 9999998888899988 889999998775
No 79
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.74 E-value=4.8e-18 Score=148.54 Aligned_cols=109 Identities=35% Similarity=0.685 Sum_probs=102.0
Q ss_pred CCCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEE
Q 014216 27 GSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTI 106 (428)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~ 106 (428)
+....+..++.++|...+++++++++|+||++||++|+.+.|.|.++++.+++++.|+.||+++++.++++|+|.++|++
T Consensus 9 ~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~ 88 (222)
T 3dxb_A 9 PMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTL 88 (222)
T ss_dssp CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSEE
T ss_pred CCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCEE
Confidence 35677899999999977778899999999999999999999999999999998899999999999999999999999999
Q ss_pred EEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 107 KVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 107 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+++++|+.+.++.|..+.+.+.+|+.+.+
T Consensus 89 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 89 LLFKNGEVAATKVGALSKGQLKEFLDANL 117 (222)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred EEEECCeEEEEeccccChHHHHHHHHhhc
Confidence 99999988889999999999999998874
No 80
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.74 E-value=7e-18 Score=129.29 Aligned_cols=102 Identities=23% Similarity=0.525 Sum_probs=90.1
Q ss_pred cEEeCc-cchHHHhhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEE
Q 014216 32 VVQLTP-NNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (428)
Q Consensus 32 ~~~l~~-~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~ 109 (428)
+.++++ ++|...+.+ ++++++|.||++||++|+++.|.+.++++.+++.+.++.+|+++++.++++|++.++|+++++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEE
Confidence 457777 788855543 789999999999999999999999999999977899999999999999999999999999999
Q ss_pred eCCCCCccccCCCCcchHHHHHHHH
Q 014216 110 VPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
++|+.+.++.| .+.+.+.+++.+.
T Consensus 82 ~~G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 82 KNGVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp ETTEEEEEEES-CCHHHHHHHHHHT
T ss_pred cCCcEEEEEcC-CCHHHHHHHHHHh
Confidence 99988888889 6888888888653
No 81
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.74 E-value=1.1e-17 Score=129.70 Aligned_cols=104 Identities=16% Similarity=0.347 Sum_probs=87.2
Q ss_pred cEEeCc-cchHHHhh--cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhc-CceEEEEEcCcccHhHHHHcCCccccEEE
Q 014216 32 VVQLTP-NNFKSKVL--NANGVVLVEFYAPWCGHCQALTPIWEKAATVLK-GVATVAALDANEHQSLAQEYGIRGFPTIK 107 (428)
Q Consensus 32 ~~~l~~-~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-~~v~~~~vd~~~~~~l~~~~~v~~~P~~~ 107 (428)
+..+++ ++|++.+. .++++++|+||++||++|+.+.|.+.++++.+. +.+.|+.+|++++++++++|++.++|+++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 81 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFI 81 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEE
Confidence 567887 88885443 238899999999999999999999999999853 45999999999999999999999999999
Q ss_pred EEeCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 108 VFVPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
++++|+.+.++.|.. .+.+.+++.+.+.
T Consensus 82 ~~~~G~~~~~~~G~~-~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 82 IIHKGTILKELSGAD-PKEYVSLLEDCKN 109 (112)
T ss_dssp EEETTEEEEEECSCC-HHHHHHHHHHHHH
T ss_pred EEECCEEEEEecCCC-HHHHHHHHHHHHh
Confidence 999998888888874 4568888887764
No 82
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.74 E-value=7.8e-18 Score=137.24 Aligned_cols=104 Identities=15% Similarity=0.243 Sum_probs=93.6
Q ss_pred eCccchHHHhh-cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEeCCC
Q 014216 35 LTPNNFKSKVL-NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGK 113 (428)
Q Consensus 35 l~~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~g~ 113 (428)
.+.++|+..+. .++++++|+||++||++|+.+.|.+.++++.+++++.|+.||++++++++++|+|.++|+++++++|+
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~ 88 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQ 88 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTE
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCe
Confidence 35678886655 56899999999999999999999999999999988999999999999999999999999999999998
Q ss_pred CC---------ccccC-CCCcchHHHHHHHHHHHH
Q 014216 114 PP---------VDYQG-ARDVKPIAEFALQQIKAL 138 (428)
Q Consensus 114 ~~---------~~~~g-~~~~~~l~~~i~~~l~~~ 138 (428)
.+ .++.| ..+.+.+.+++.+.++..
T Consensus 89 ~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~~ 123 (149)
T 3gix_A 89 HMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGA 123 (149)
T ss_dssp EEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHHH
T ss_pred EEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHHh
Confidence 87 78899 899999999998876543
No 83
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.74 E-value=4.8e-18 Score=133.65 Aligned_cols=105 Identities=38% Similarity=0.782 Sum_probs=92.9
Q ss_pred CCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC-----ceEEEEEcCcccHhHHHHcCCcc
Q 014216 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-----VATVAALDANEHQSLAQEYGIRG 102 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-----~v~~~~vd~~~~~~l~~~~~v~~ 102 (428)
....+..++.++|...+..++++++|+||++||++|+++.|.|.++++.+++ .+.|+.+|+++++ +++ +|.+
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~ 81 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG 81 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc
Confidence 4567899999999965556789999999999999999999999999999987 7999999999876 665 9999
Q ss_pred ccEEEEEeCCCC--CccccCCCCcchHHHHHHHHH
Q 014216 103 FPTIKVFVPGKP--PVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 103 ~P~~~~~~~g~~--~~~~~g~~~~~~l~~~i~~~l 135 (428)
+|++++|.+|+. +.++.|.++.+.|.+|+.+.+
T Consensus 82 ~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 82 FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENG 116 (121)
T ss_dssp SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTS
T ss_pred CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhcc
Confidence 999999988855 788999999999999998763
No 84
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.74 E-value=4.6e-18 Score=131.76 Aligned_cols=104 Identities=22% Similarity=0.511 Sum_probs=92.7
Q ss_pred CCCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEE
Q 014216 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~ 107 (428)
.++....++.++|++ +++++++++|+||++||++|+.+.|.+.++++.+++ +.|+.+|+++++.++++|+|.++|+++
T Consensus 7 ~~~~~~~~~~~~f~~-~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~~~~~~~~~~v~~~Pt~~ 84 (112)
T 1syr_A 7 HHMVKIVTSQAEFDS-IISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK-MVFIKVDVDEVSEVTEKENITSMPTFK 84 (112)
T ss_dssp --CCEEECSHHHHHH-HHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred ceeEEEECCHHHHHH-HHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CEEEEEECCCCHHHHHHcCCCcccEEE
Confidence 346678899999994 556889999999999999999999999999999875 999999999999999999999999999
Q ss_pred EEeCCCCCccccCCCCcchHHHHHHHH
Q 014216 108 VFVPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
++++|+.+.++.|. +.+.+.+++.+.
T Consensus 85 ~~~~G~~~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 85 VYKNGSSVDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp EEETTEEEEEEESC-CHHHHHHHHHTT
T ss_pred EEECCcEEEEEeCC-CHHHHHHHHHHh
Confidence 99999887888998 889999888754
No 85
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.74 E-value=3.5e-18 Score=135.87 Aligned_cols=91 Identities=18% Similarity=0.323 Sum_probs=85.2
Q ss_pred HhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEeCCCCCccccCCC
Q 014216 43 KVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGAR 122 (428)
Q Consensus 43 ~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~ 122 (428)
....++++++|+||++||++|+++.|.+.++++.+++++.++.||++++++++++|+|.++|+++++++|+.+.++.|..
T Consensus 37 ~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~ 116 (128)
T 3ul3_B 37 GVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTMLARKDHFV 116 (128)
T ss_dssp BTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEEEEESSCC
T ss_pred HHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEEEEecCCC
Confidence 55567999999999999999999999999999999988999999999999999999999999999999998888999999
Q ss_pred CcchHHHHHHH
Q 014216 123 DVKPIAEFALQ 133 (428)
Q Consensus 123 ~~~~l~~~i~~ 133 (428)
+.+.+.+++.+
T Consensus 117 ~~~~l~~~l~~ 127 (128)
T 3ul3_B 117 SSNDLIALIKK 127 (128)
T ss_dssp CHHHHHHHHTT
T ss_pred CHHHHHHHHHh
Confidence 99999998853
No 86
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.74 E-value=1.1e-17 Score=127.92 Aligned_cols=98 Identities=22% Similarity=0.553 Sum_probs=87.2
Q ss_pred Ee-CccchHHHhhc--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEe
Q 014216 34 QL-TPNNFKSKVLN--ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV 110 (428)
Q Consensus 34 ~l-~~~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~ 110 (428)
.+ +.++|+ ..+. ++++++|+||++||++|+.+.|.+.++++.+++ +.++.+|++++++++++|++.++|++++|.
T Consensus 4 ~i~~~~~~~-~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 81 (105)
T 3m9j_A 4 QIESKTAFQ-EALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEVKSMPTFQFFK 81 (105)
T ss_dssp ECCSHHHHH-HHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHHHHHHTTCCBSSEEEEEE
T ss_pred EcCCHHHHH-HHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHHHHHHcCCCcCcEEEEEE
Confidence 44 345666 4444 689999999999999999999999999999987 999999999999999999999999999999
Q ss_pred CCCCCccccCCCCcchHHHHHHHH
Q 014216 111 PGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 111 ~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
+|+.+.++.|. +.+.+.+++.+.
T Consensus 82 ~g~~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 82 KGQKVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp TTEEEEEEESS-CHHHHHHHHHHH
T ss_pred CCeEEEEEeCC-CHHHHHHHHHHh
Confidence 99888889998 999999998765
No 87
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.73 E-value=1.2e-17 Score=137.09 Aligned_cols=105 Identities=19% Similarity=0.418 Sum_probs=89.9
Q ss_pred CCCCcEEeCc-cchHHHhhcC--CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCcccc
Q 014216 28 SSSPVVQLTP-NNFKSKVLNA--NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFP 104 (428)
Q Consensus 28 ~~~~~~~l~~-~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 104 (428)
....+..++. ++|. .++.+ +++++|+||++||++|+++.|.|.++++.++ .+.|+.||+++++.++++|+|.++|
T Consensus 10 ~~~~v~~l~~~~~~~-~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~P 87 (153)
T 2wz9_A 10 AVAAVEEVGSAGQFE-ELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVPEVSEKYEISSVP 87 (153)
T ss_dssp --CCSEEECSHHHHH-HHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSSS
T ss_pred ccCCeEEcCCHHHHH-HHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCCHHHHHHcCCCCCC
Confidence 3466888874 7788 44454 8999999999999999999999999999975 5999999999999999999999999
Q ss_pred EEEEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 105 TIKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 105 ~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
++++|.+|+.+.++.|. +.+.+.+++.+.+
T Consensus 88 t~~~~~~G~~~~~~~G~-~~~~l~~~i~~~l 117 (153)
T 2wz9_A 88 TFLFFKNSQKIDRLDGA-HAPELTKKVQRHA 117 (153)
T ss_dssp EEEEEETTEEEEEEESS-CHHHHHHHHHHHS
T ss_pred EEEEEECCEEEEEEeCC-CHHHHHHHHHHHh
Confidence 99999988877778884 6777888887764
No 88
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.73 E-value=6e-18 Score=131.42 Aligned_cols=101 Identities=21% Similarity=0.387 Sum_probs=89.1
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEE
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~ 109 (428)
..+..+++.++.+.+++++++++|+||++||++|+++.|.|.++++.+++ +.|+.+|++++++++++|++.++|+++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 90 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPDIAKECEVTAMPTFVLG 90 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSBSEEEEE
T ss_pred hheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHCCCCcccEEEEE
Confidence 44556666555546777899999999999999999999999999999887 99999999999999999999999999999
Q ss_pred eCCCCCccccCCCCcchHHHHHH
Q 014216 110 VPGKPPVDYQGARDVKPIAEFAL 132 (428)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~i~ 132 (428)
++|+.+.++.|.. .+.+.+++.
T Consensus 91 ~~G~~~~~~~G~~-~~~l~~~l~ 112 (114)
T 2oe3_A 91 KDGQLIGKIIGAN-PTALEKGIK 112 (114)
T ss_dssp ETTEEEEEEESSC-HHHHHHHHH
T ss_pred eCCeEEEEEeCCC-HHHHHHHHH
Confidence 9998888899988 888888775
No 89
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.73 E-value=8.3e-17 Score=128.22 Aligned_cols=113 Identities=53% Similarity=0.986 Sum_probs=102.6
Q ss_pred CCCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEE
Q 014216 157 SDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTI 236 (428)
Q Consensus 157 ~~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i 236 (428)
.....+..++.+++...+...+++++|.||++||++|+.+.+.|.++++.+.+.+.|+.||++.+..++++|+|+++|++
T Consensus 14 ~~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 93 (130)
T 2dml_A 14 SSSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTI 93 (130)
T ss_dssp CTTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEE
T ss_pred CCCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEE
Confidence 45667999999999987777788999999999999999999999999999998899999999999999999999999999
Q ss_pred EEEcCCCCCcccccCCCCHHHHHHHHHHHHhhc
Q 014216 237 LVFGADKDSPIPYEGARTAGAIESFALEQLETN 269 (428)
Q Consensus 237 ~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~ 269 (428)
++|++++.....|.|..+.+.+.+|+.+.+...
T Consensus 94 ~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~~~ 126 (130)
T 2dml_A 94 KIFGANKNKPEDYQGGRTGEAIVDAALSALRSG 126 (130)
T ss_dssp EEESSCTTSCEECCSCCSHHHHHHHHHHHHHHS
T ss_pred EEEeCCCCeEEEeecCCCHHHHHHHHHHHHhcC
Confidence 999877655788999999999999999887543
No 90
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.73 E-value=1.1e-17 Score=135.28 Aligned_cols=105 Identities=33% Similarity=0.612 Sum_probs=83.2
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEE
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~ 109 (428)
..+.+++.++|...+...++ ++|+||++||++|+.+.|.|.+++..+++++.|+.||+++++.++++|++.++|++++|
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 111 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTLVLF 111 (140)
T ss_dssp ----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CccccCCHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCccCEEEEE
Confidence 56788999999965555555 99999999999999999999999999998899999999999999999999999999999
Q ss_pred eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 110 VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
++|+.+.++.|..+.+.+.+|+.+.+
T Consensus 112 ~~G~~~~~~~G~~~~~~l~~~i~~~l 137 (140)
T 1v98_A 112 RRGAPVATWVGASPRRVLEERLRPYL 137 (140)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred eCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 99988888999999999999998775
No 91
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=3.6e-18 Score=137.52 Aligned_cols=107 Identities=17% Similarity=0.354 Sum_probs=95.4
Q ss_pred CCCCcEEeCccchHHHhhcCC-CeEEEEEECCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcccHhHHHHcCCc----
Q 014216 28 SSSPVVQLTPNNFKSKVLNAN-GVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANEHQSLAQEYGIR---- 101 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~~~-~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~---- 101 (428)
....+..++.++|+..+.... ++++|+||++||++|+++.|.|.++++.+++ .+.|+.||++++++++++|+|.
T Consensus 5 ~~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~ 84 (137)
T 2dj0_A 5 SSGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPL 84 (137)
T ss_dssp CCSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSS
T ss_pred CCceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCC
Confidence 456789999999996664443 4999999999999999999999999999986 7999999999999999999999
Q ss_pred --cccEEEEEeCCCCCccccCCCCcchHHHHHHHH
Q 014216 102 --GFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 102 --~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
++|++++|++|+.+.++.|..+.+.+.+|+.+.
T Consensus 85 ~~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 85 TKQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp SSCSSEEEEESSSSEEEEESCBCSSSCBCCCCCCH
T ss_pred cCCCCEEEEEECCEEEEEecCcCchHHHHHHHhcc
Confidence 999999999998888899999999888888544
No 92
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.72 E-value=3.3e-17 Score=129.40 Aligned_cols=105 Identities=28% Similarity=0.493 Sum_probs=92.6
Q ss_pred CCCCcEEeCccchHHHhhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCc-ccHhHHHHcCCccccE
Q 014216 28 SSSPVVQLTPNNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN-EHQSLAQEYGIRGFPT 105 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~-~~~~l~~~~~v~~~P~ 105 (428)
....+..++.++|...+.. ++++++|+||++||++|+++.|.+.++++.+++ +.++.+|++ ++++++++|+++++|+
T Consensus 16 ~~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~~v~~~Pt 94 (124)
T 1faa_A 16 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVPT 94 (124)
T ss_dssp TTTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSSSSE
T ss_pred cCCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcchHHHHHHcCCCeeeE
Confidence 3567899999999965543 688999999999999999999999999999875 899999998 7899999999999999
Q ss_pred EEEEeCCCCCccccCCCCcchHHHHHHHH
Q 014216 106 IKVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 106 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
++++++|+.+.++.|.. .+.+.+++.+.
T Consensus 95 ~~~~~~G~~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 95 FKILKENSVVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp EEEEETTEEEEEEESSC-HHHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCCC-HHHHHHHHHHh
Confidence 99999998877888876 78888888764
No 93
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.72 E-value=3.5e-17 Score=129.13 Aligned_cols=105 Identities=22% Similarity=0.452 Sum_probs=91.5
Q ss_pred CCCCcEEe-CccchHHHhhc---CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccc
Q 014216 28 SSSPVVQL-TPNNFKSKVLN---ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGF 103 (428)
Q Consensus 28 ~~~~~~~l-~~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 103 (428)
....+..+ +.++|+..+.. ++++++|+||++||++|+.+.|.|.++++.++ .+.|+.+|++++++++++|+|.++
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~ 92 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELKSVASDWAIQAM 92 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSHHHHHHTTCCSS
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHHcCCCcc
Confidence 45668888 55788855543 58999999999999999999999999999987 599999999999999999999999
Q ss_pred cEEEEEeCCCCCccccCCCCcchHHHHHHHH
Q 014216 104 PTIKVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 104 P~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
|+++++++|+.+.++.| .+.+.+.+++.+.
T Consensus 93 Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 93 PTFMFLKEGKILDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp SEEEEEETTEEEEEEES-CCHHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeC-CCHHHHHHHHHHh
Confidence 99999999988778888 4888888888765
No 94
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.72 E-value=1.9e-17 Score=129.41 Aligned_cols=101 Identities=22% Similarity=0.524 Sum_probs=89.3
Q ss_pred CcEEeCc-cchHHHhhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEE
Q 014216 31 PVVQLTP-NNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (428)
Q Consensus 31 ~~~~l~~-~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~ 108 (428)
.+.++++ ++|...+.+ ++++++|+||++||++|+++.|.+.++++.+ .+.++.+|++++++++++|++.++|++++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 91 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEETARKYNISAMPTFIA 91 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHHHHHHTTCCSSSEEEE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHHHHHHcCCCccceEEE
Confidence 3788888 888855443 6889999999999999999999999999988 68999999999999999999999999999
Q ss_pred EeCCCCCccccCCCCcchHHHHHHHH
Q 014216 109 FVPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 109 ~~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
+++|+.+.++.| .+.+.+.+++.+.
T Consensus 92 ~~~G~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 92 IKNGEKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp EETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred EeCCcEEEEEeC-CCHHHHHHHHHHh
Confidence 999988888888 5788888888754
No 95
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.72 E-value=1.9e-17 Score=150.93 Aligned_cols=106 Identities=29% Similarity=0.523 Sum_probs=97.6
Q ss_pred CCCcEEeCccchHHHhhcC--CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEE
Q 014216 29 SSPVVQLTPNNFKSKVLNA--NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTI 106 (428)
Q Consensus 29 ~~~~~~l~~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~ 106 (428)
...+.+++.++|+. ++.. +++++|+||++||++|+.+.|.|.++++.+++++.|+.||++++++++++|+|.++||+
T Consensus 6 ~~~v~~~~~~~f~~-~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 6 VENIVNINESNLQQ-VLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTV 84 (287)
T ss_dssp CTTEEECCTTTHHH-HHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEE
T ss_pred CCccEECCHHHHHH-HHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeE
Confidence 35688999999996 4443 78999999999999999999999999999999899999999999999999999999999
Q ss_pred EEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 107 KVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 107 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
++|.+|+.+.++.|..+.+.+..|+.+.+
T Consensus 85 ~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 85 YLFQNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred EEEECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 99999988888999999999999998774
No 96
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.72 E-value=3.2e-17 Score=125.09 Aligned_cols=100 Identities=21% Similarity=0.479 Sum_probs=87.6
Q ss_pred EEeCc-cchHHHhhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEe
Q 014216 33 VQLTP-NNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV 110 (428)
Q Consensus 33 ~~l~~-~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~ 110 (428)
..+++ ++|+..+.. ++++++|.||++||++|+.+.|.+.++++.++ .+.|+.+|++++++++++|++.++|+++++.
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIK 80 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCHHHHHHcCCccccEEEEEe
Confidence 45666 778854433 68899999999999999999999999999987 5999999999999999999999999999999
Q ss_pred CCCCCccccCCCCcchHHHHHHHH
Q 014216 111 PGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 111 ~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
+|+.+.++.| .+.+.+.+++.+.
T Consensus 81 ~g~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 81 DGKEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp TTEEEEEEES-SCHHHHHHHHHHH
T ss_pred CCcEEEEEeC-CCHHHHHHHHHhh
Confidence 9988888888 6888888888764
No 97
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.72 E-value=2.1e-17 Score=128.11 Aligned_cols=100 Identities=17% Similarity=0.227 Sum_probs=85.1
Q ss_pred CCcEEeCccchHHHhhcCCC--eEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEE
Q 014216 30 SPVVQLTPNNFKSKVLNANG--VVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~--~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~ 107 (428)
..+.+++.++|.+.+.++++ +++|+||++||++|+.+.|.++++++++.+ +.|++||+++. +++|+|+++||++
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~-v~f~kvd~d~~---~~~~~v~~~PT~~ 78 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE-TKFVKAIVNSC---IQHYHDNCLPTIF 78 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT-SEEEEEEGGGT---STTCCGGGCSEEE
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC-CEEEEEEhHHh---HHHCCCCCCCEEE
Confidence 35778999999977765554 999999999999999999999999999875 89999999976 5899999999999
Q ss_pred EEeCCCCCccccCCC-------CcchHHHHHHH
Q 014216 108 VFVPGKPPVDYQGAR-------DVKPIAEFALQ 133 (428)
Q Consensus 108 ~~~~g~~~~~~~g~~-------~~~~l~~~i~~ 133 (428)
+|++|+.+.++.|.. +.+.+..+|.+
T Consensus 79 ~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 79 VYKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp EEETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred EEECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 999999888887765 45666666653
No 98
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.71 E-value=3.3e-17 Score=132.36 Aligned_cols=102 Identities=16% Similarity=0.241 Sum_probs=87.0
Q ss_pred CccchHHHhhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEeCCCC
Q 014216 36 TPNNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKP 114 (428)
Q Consensus 36 ~~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~g~~ 114 (428)
+.++|+..+.+ ++++++|.||++||++|+.+.|.++++++.+++++.|+.||++++++++++|+|.++|++++|++|+.
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~ 89 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKH 89 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcE
Confidence 45678755655 68999999999999999999999999999998889999999999999999999999999999999876
Q ss_pred Cc---------cccCCCC-cchHHHHHHHHHHH
Q 014216 115 PV---------DYQGARD-VKPIAEFALQQIKA 137 (428)
Q Consensus 115 ~~---------~~~g~~~-~~~l~~~i~~~l~~ 137 (428)
+. +..|..+ .+.+.+++.+.++.
T Consensus 90 v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 90 IMIDLGTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp EEEECC------CCSCCSCHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 54 3455554 77888888877654
No 99
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.71 E-value=1.1e-17 Score=134.59 Aligned_cols=104 Identities=12% Similarity=0.139 Sum_probs=81.4
Q ss_pred CcEEeCccchHHHhhcCCCeEEEEEECCC--ChhhhhhhHHHHHHHHHhcCceE--EEEEcCcccHhHHHHcCCccccEE
Q 014216 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPW--CGHCQALTPIWEKAATVLKGVAT--VAALDANEHQSLAQEYGIRGFPTI 106 (428)
Q Consensus 31 ~~~~l~~~~~~~~~~~~~~~~lv~f~~~~--C~~C~~~~~~~~~~~~~~~~~v~--~~~vd~~~~~~l~~~~~v~~~P~~ 106 (428)
.+..++.++|++ ++.+++.++|.|++.| |++|+.+.|.|+++++.+ +++. |+.||++++++++++|+|+++||+
T Consensus 18 ~~~~l~~~~f~~-~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~ 95 (142)
T 2es7_A 18 GWQPVEASTVDD-WIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNVRRFPAT 95 (142)
T ss_dssp TCEECCCC---------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTCCSSSEE
T ss_pred cCcccccccHHH-HHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCCCcCCeE
Confidence 578999999994 5556677899999887 999999999999999999 7788 999999999999999999999999
Q ss_pred EEEeCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 107 KVFVPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 107 ~~~~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
++|++|+.+.++.|..+.+.|.+++.+.+.
T Consensus 96 ~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~ 125 (142)
T 2es7_A 96 LVFTDGKLRGALSGIHPWAELLTLMRSIVD 125 (142)
T ss_dssp EEESCC----CEESCCCHHHHHHHHHHHHC
T ss_pred EEEeCCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 999999988999999999999999998863
No 100
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.71 E-value=1.1e-16 Score=123.58 Aligned_cols=108 Identities=23% Similarity=0.408 Sum_probs=98.1
Q ss_pred CCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEE
Q 014216 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILV 238 (428)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~ 238 (428)
..++..++.+++.+.+...+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.++.++++|++.++|++++
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 82 (111)
T 3gnj_A 3 AMSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILY 82 (111)
T ss_dssp CCCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEEE
T ss_pred CCcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEEE
Confidence 45689999999999886778999999999999999999999999999999889999999999999999999999999999
Q ss_pred EcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 239 FGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 239 ~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
|++ ++....+.|..+.+.+.+|+.+.+.
T Consensus 83 ~~~-g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 83 FKD-GEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EET-TEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEC-CEEEEEEeccCCHHHHHHHHHHHhc
Confidence 964 4456678999999999999988753
No 101
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.71 E-value=7.7e-17 Score=124.98 Aligned_cols=105 Identities=22% Similarity=0.464 Sum_probs=91.7
Q ss_pred CCCcEEe-CccchHHHhhc---CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCcccc
Q 014216 29 SSPVVQL-TPNNFKSKVLN---ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFP 104 (428)
Q Consensus 29 ~~~~~~l-~~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 104 (428)
...+..+ +.++|.+.+.. ++++++|+||++||++|+.+.|.+.++++.++ .+.|+.+|+++++.++++|++.++|
T Consensus 3 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~P 81 (113)
T 1ti3_A 3 EGQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKAVAEEWNVEAMP 81 (113)
T ss_dssp CCCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHHHHHHHHCSSTT
T ss_pred CCceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHHHHHhCCCCccc
Confidence 3557777 55788855543 48899999999999999999999999999987 5999999999999999999999999
Q ss_pred EEEEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 105 TIKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 105 ~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+++++.+|+.+.++.| .+.+.+.+++.+.+
T Consensus 82 t~~~~~~G~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 82 TFIFLKDGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp EEEEEETTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred EEEEEeCCEEEEEEec-CCHHHHHHHHHHhh
Confidence 9999999987778888 68889999998775
No 102
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.71 E-value=1.9e-17 Score=129.55 Aligned_cols=102 Identities=16% Similarity=0.182 Sum_probs=87.1
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcC----cccHhHHHHcCCccccE
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA----NEHQSLAQEYGIRGFPT 105 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~----~~~~~l~~~~~v~~~P~ 105 (428)
..+..++.+++.. .+.++++++|+||++||++|+++.|.+.++++.++..+.++.++. +....++++|+|.++|+
T Consensus 12 ~~~~~~~~~~~~~-~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt 90 (118)
T 1zma_A 12 KDLEVTTVVRAQE-ALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPG 90 (118)
T ss_dssp TTSEECCHHHHHH-HHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCE
T ss_pred hhhhcCCHHHHHH-HHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCe
Confidence 4577889899994 456788999999999999999999999999999887777764433 34568999999999999
Q ss_pred EEEEeCCCCCccccCCCCcchHHHHHH
Q 014216 106 IKVFVPGKPPVDYQGARDVKPIAEFAL 132 (428)
Q Consensus 106 ~~~~~~g~~~~~~~g~~~~~~l~~~i~ 132 (428)
++++.+|+.+.++.|..+.+.|.+|+.
T Consensus 91 ~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 91 FVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp EEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred EEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 999999988889999999999988874
No 103
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.71 E-value=1.2e-16 Score=121.61 Aligned_cols=101 Identities=19% Similarity=0.448 Sum_probs=85.9
Q ss_pred cEEeCc-cchHHHHhhc-CCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEE
Q 014216 162 SIELNS-SNFDELVLKS-KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (428)
Q Consensus 162 v~~l~~-~~~~~~~~~~-~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~ 239 (428)
|.++++ ++|.+.+.+. +++++|.||++||++|+.+.|.|.++++.+. .+.|+.||++++++++++|+|+++||+++|
T Consensus 2 V~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~ 80 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVDECEDIAQDNQIACMPTFLFM 80 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCBSSEEEEE
T ss_pred eEEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecccCHHHHHHcCCCeecEEEEE
Confidence 445544 6788777554 5799999999999999999999999999886 589999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 240 GADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
++| +...++.| .+.+.|.+||.+|
T Consensus 81 ~~G-~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 81 KNG-QKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp ETT-EEEEEEES-CCHHHHHHHHHHH
T ss_pred ECC-EEEEEEeC-cCHHHHHHHHHhc
Confidence 754 44566777 5899999999876
No 104
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.70 E-value=3e-17 Score=129.01 Aligned_cols=106 Identities=30% Similarity=0.578 Sum_probs=93.0
Q ss_pred CCCCcEEeCc-cchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcccHhHHHHcCCccccE
Q 014216 28 SSSPVVQLTP-NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANEHQSLAQEYGIRGFPT 105 (428)
Q Consensus 28 ~~~~~~~l~~-~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~P~ 105 (428)
....+..+++ ++|+ .++.++++++|+||++||++|+.+.|.+.++++.+++. +.++.+|++++++++++|++.++|+
T Consensus 13 ~~~~~~~i~~~~~f~-~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt 91 (121)
T 2j23_A 13 PRGSVQVISSYDQFK-QVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPT 91 (121)
T ss_dssp CCCCEEECCSHHHHH-HHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSE
T ss_pred CCcceEEcCCHHHHH-HHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccE
Confidence 3455667776 7788 45578899999999999999999999999999988875 9999999999999999999999999
Q ss_pred EEEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 106 IKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 106 ~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+++|.+|+.+.++.|. +.+.+.+++.+.+
T Consensus 92 ~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 92 FVFFKNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEEETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred EEEEECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 9999999888888998 8889999987653
No 105
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.70 E-value=4.6e-17 Score=128.99 Aligned_cols=104 Identities=13% Similarity=0.097 Sum_probs=89.4
Q ss_pred cEEeCccchH----HHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEc--CcccHhHHHHcCCccccE
Q 014216 32 VVQLTPNNFK----SKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALD--ANEHQSLAQEYGIRGFPT 105 (428)
Q Consensus 32 ~~~l~~~~~~----~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd--~~~~~~l~~~~~v~~~P~ 105 (428)
+..++..+++ .....++++++|+||++||++|+++.|.+.++++.+++.+.++.|| ++++.+++++|++.++|+
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt 85 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPT 85 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSE
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeE
Confidence 3444544444 1234568899999999999999999999999999998789999999 999999999999999999
Q ss_pred EEEEe-CCCCCccccCCCCcchHHHHHHHHH
Q 014216 106 IKVFV-PGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 106 ~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
++++. +|+.+.++.|..+.+.+.+++.+.+
T Consensus 86 ~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~ 116 (126)
T 2l57_A 86 TVFLDKEGNKFYVHQGLMRKNNIETILNSLG 116 (126)
T ss_dssp EEEECTTCCEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEECCCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 99998 7877778999999999999998774
No 106
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.70 E-value=3.7e-17 Score=126.11 Aligned_cols=100 Identities=16% Similarity=0.290 Sum_probs=89.3
Q ss_pred cEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEeC
Q 014216 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVP 111 (428)
Q Consensus 32 ~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~ 111 (428)
+..++.++| ..+ .++++++|+||++||++|+.+.|.+.+++..+. .+.++.+|++++++++++|++.++|++++|++
T Consensus 5 ~~~~~~~~f-~~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 81 (110)
T 2l6c_A 5 RDITTEAGM-AHF-EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARPELMKELGFERVPTLVFIRD 81 (110)
T ss_dssp SBCGGGCSH-HHH-TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEES
T ss_pred eecCCHHHH-HHH-HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCHHHHHHcCCcccCEEEEEEC
Confidence 345677888 344 567999999999999999999999999999876 58999999999999999999999999999999
Q ss_pred CCCCccccCCCCcchHHHHHHHH
Q 014216 112 GKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 112 g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
|+.+.++.|..+.+.|.+++.+.
T Consensus 82 G~~v~~~~G~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 82 GKVAKVFSGIMNPRELQALYASI 104 (110)
T ss_dssp SSEEEEEESCCCHHHHHHHHHTC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHH
Confidence 98888999999999999998765
No 107
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.70 E-value=6.5e-17 Score=126.39 Aligned_cols=102 Identities=27% Similarity=0.469 Sum_probs=89.0
Q ss_pred CcEEe--CccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEE
Q 014216 31 PVVQL--TPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (428)
Q Consensus 31 ~~~~l--~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~ 108 (428)
.+..+ +..+|.+.+.+++++++|+||++||++|+.+.|.|.++++.+ +.+.|+.||++++++++++|+|.++|++++
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~ 82 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGNAADAYGVSSIPALFF 82 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHhcCCCCCCEEEE
Confidence 46677 567788566667899999999999999999999999999998 679999999999999999999999999999
Q ss_pred EeC----CCCCccccCCCCcchHHHHHHHH
Q 014216 109 FVP----GKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 109 ~~~----g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
|.+ |+.+.++.|..+. .|...+.+.
T Consensus 83 ~~~~~~~G~~~~~~~G~~~~-~l~~~~~~~ 111 (118)
T 2f51_A 83 VKKEGNEIKTLDQFVGADVS-RIKADIEKF 111 (118)
T ss_dssp EEEETTEEEEEEEEESCCHH-HHHHHHHHH
T ss_pred EeCCCCcceEEEeecCCCHH-HHHHHHHHh
Confidence 988 8778888887754 488877765
No 108
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.53 E-value=1.3e-18 Score=133.37 Aligned_cols=104 Identities=34% Similarity=0.661 Sum_probs=94.7
Q ss_pred CcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEe
Q 014216 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV 110 (428)
Q Consensus 31 ~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~ 110 (428)
++.+++.++|...+..++++++|.||++||++|+.+.|.+.++++.+++++.++.+|+++++.++++|++.++|++++++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (106)
T 2yj7_A 2 SVIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFK 81 (106)
Confidence 35678889998666677899999999999999999999999999999888999999999999999999999999999998
Q ss_pred CCCCCccccCCCCcchHHHHHHHH
Q 014216 111 PGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 111 ~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
+|+.+.++.|..+.+.+.+++.+.
T Consensus 82 ~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 82 NGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 888888899999999999888754
No 109
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.69 E-value=3.5e-15 Score=131.83 Aligned_cols=202 Identities=16% Similarity=0.181 Sum_probs=152.0
Q ss_pred cchHHHHhhcCCeEEEEEECCC--ChhHhhHHHHHHHHHHHh---cCC--eEEEEEeCCCchhHhhhcCCCcCcEEEEEc
Q 014216 168 SNFDELVLKSKDLWIVEFFAPW--CGHCKKLAPEWKKAANNL---KGK--VKLGHVDCDSEKSLMSKFNVQGFPTILVFG 240 (428)
Q Consensus 168 ~~~~~~~~~~~~~~~v~f~~~~--c~~c~~~~~~~~~~a~~~---~~~--~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~ 240 (428)
+++...+..-..+++|.||++| |++|+.+.+.+.++|+.. +++ +.|+.+|++.+.+++++|||+++|++++|
T Consensus 15 ~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~- 93 (243)
T 2hls_A 15 RELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL- 93 (243)
T ss_dssp HHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-
T ss_pred HHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-
Confidence 3344444445678999999999 999999999999999984 333 99999999999999999999999999999
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHHHhhcCCCCcceecCchhhhhhhc-CCCCeEEEEecCCccchhhhchhHHHHHHHH
Q 014216 241 ADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKC-GSAAICFVSFLPDILDSKAEGRNKYLEMLLS 319 (428)
Q Consensus 241 ~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~-~~~~~~vi~f~~~~~~~~~~~~~~~~~~~~~ 319 (428)
++ ...|.|......+..|+...+......+. ++ .+..+... ..++..++.|+..|+.... .....+.+
T Consensus 94 -~g--~~~~~G~~~~~~l~~fv~~~l~~~~~~~~---l~-~~~~~~~~~~~~~~~vv~F~a~wC~~C~----~~~p~l~~ 162 (243)
T 2hls_A 94 -GG--EVRWTGIPAGEEIRALVEVIMRLSEDESG---LE-DATKEALKSLKGRVHIETIITPSCPYCP----YAVLLAHM 162 (243)
T ss_dssp -TT--TEEEESCCCTTHHHHHHHHHHHHHTTCCC---CC-HHHHHHHHHCCSCEEEEEEECSSCSSHH----HHHHHHHH
T ss_pred -CC--ceeEcCCCcHHHHHHHHHHHHhccCCCCC---CC-HHHHHHHHHcCCCcEEEEEECCCCCCcH----HHHHHHHH
Confidence 23 77888888888999998876543322222 22 22222222 2345667777777665543 45678888
Q ss_pred HHHHhh--c-CcceEEEecCCCchhHHHHhCCCCCCCceEEEEeccCCccccCCCCCCHHHHHHHHHHHhcC
Q 014216 320 VAEKFK--R-GHYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLKSAFELEHIVEFVKEAGRG 388 (428)
Q Consensus 320 ~a~~~~--~-~~~~f~~id~~~~~~~~~~~gl~~~~~P~~~i~~~~~~~~~~~~~~~~~~~i~~fi~~~~~g 388 (428)
+|..++ + ..+.+..+|...++.++..||+.. +|++++ + ++. .+.|..+.++|.+||.+.+..
T Consensus 163 la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~--vPt~~i-~---G~~-~~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 163 FAYEAWKQGNPVILSEAVEAYENPDIADKYGVMS--VPSIAI-N---GYL-VFVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp HHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCS--SSEEEE-T---TEE-EEESCCCHHHHHHHHHHHHTT
T ss_pred HHHHcccccCCcEEEEEEECccCHHHHHHcCCee--eCeEEE-C---CEE-EEeCCCCHHHHHHHHHHHhhc
Confidence 888884 1 239999999999999999999986 999977 2 233 377889999999999998754
No 110
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.69 E-value=1.8e-17 Score=132.91 Aligned_cols=102 Identities=18% Similarity=0.287 Sum_probs=92.8
Q ss_pred CCCcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcC---------cccHhHHHHcC
Q 014216 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA---------NEHQSLAQEYG 99 (428)
Q Consensus 29 ~~~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~---------~~~~~l~~~~~ 99 (428)
...+..++.++|...+ .+ +++|+||++||++|+++.|.+.++++.++ +.|+.||+ +++++++++|+
T Consensus 15 ~~~v~~l~~~~~~~~~-~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~ 89 (135)
T 3emx_A 15 DGRLIYITPEEFRQLL-QG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAG 89 (135)
T ss_dssp TTEEEECCHHHHHHHH-TS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHT
T ss_pred cCceeecCHHHHHHHh-CC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcC
Confidence 3568899999999544 44 99999999999999999999999999887 88999999 88999999999
Q ss_pred CccccEEEEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 100 IRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 100 v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
|.++|+++++++|+.+.++.|..+.+.+..++.+.+
T Consensus 90 v~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~ 125 (135)
T 3emx_A 90 VEGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIY 125 (135)
T ss_dssp CCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred CceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 999999999999988889999999999999998875
No 111
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.69 E-value=2.6e-16 Score=120.92 Aligned_cols=106 Identities=30% Similarity=0.638 Sum_probs=95.5
Q ss_pred CCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEE
Q 014216 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (428)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~ 239 (428)
..+..++.+++...+...+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.+++++++|++.++|++++|
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEEEE
Confidence 45788999999987767788999999999999999999999999999988899999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 240 GADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+ +++....+.|..+.+.+.+|+.+.+
T Consensus 82 ~-~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 82 K-NGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp E-TTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred e-CCEEEEEEecCCCHHHHHHHHHHhh
Confidence 5 4555667889999999999998764
No 112
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.69 E-value=1.9e-16 Score=123.95 Aligned_cols=111 Identities=27% Similarity=0.516 Sum_probs=98.7
Q ss_pred CCCCCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCc
Q 014216 155 SKSDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFP 234 (428)
Q Consensus 155 ~~~~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P 234 (428)
+.+.++.+..++.++|.+.+.+.+++++|.||++||++|+.+.+.+.++++.+.+.+.|+.||++.+.+++++|++.++|
T Consensus 8 ~~~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~P 87 (119)
T 1w4v_A 8 HHHGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVP 87 (119)
T ss_dssp --CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSS
T ss_pred ccCCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCccc
Confidence 34568889999999999988777889999999999999999999999999999888999999999999999999999999
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 235 TILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
++++|+ ++.....+.|..+.+.|.+|+.+.+
T Consensus 88 t~~~~~-~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 88 TVLAMK-NGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEEEEE-TTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEe-CCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 999995 4445567889999999999998764
No 113
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.68 E-value=1.7e-16 Score=123.99 Aligned_cols=105 Identities=21% Similarity=0.468 Sum_probs=91.1
Q ss_pred CCCcEEeC-ccchHHHhhc---CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCcccc
Q 014216 29 SSPVVQLT-PNNFKSKVLN---ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFP 104 (428)
Q Consensus 29 ~~~~~~l~-~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 104 (428)
...+..++ .++|+..+.. ++++++|.||++||++|+.+.|.+.++++.++ .+.++.+|+++++.++++|++.++|
T Consensus 5 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~P 83 (118)
T 2vm1_A 5 EGAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELKDVAEAYNVEAMP 83 (118)
T ss_dssp CCCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSBS
T ss_pred CCceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCHHHHHHcCCCcCc
Confidence 34577774 5788855433 38899999999999999999999999999987 5899999999999999999999999
Q ss_pred EEEEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 105 TIKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 105 ~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+++++++|+.+.++.| .+.+.+.+++.+.+
T Consensus 84 t~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~ 113 (118)
T 2vm1_A 84 TFLFIKDGEKVDSVVG-GRKDDIHTKIVALM 113 (118)
T ss_dssp EEEEEETTEEEEEEES-CCHHHHHHHHHHHH
T ss_pred EEEEEeCCeEEEEecC-CCHHHHHHHHHHHh
Confidence 9999999988778888 57888999998775
No 114
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.68 E-value=2.2e-16 Score=127.37 Aligned_cols=106 Identities=18% Similarity=0.345 Sum_probs=92.3
Q ss_pred CCCcEEeC-ccchHHHhh---cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCcccc
Q 014216 29 SSPVVQLT-PNNFKSKVL---NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFP 104 (428)
Q Consensus 29 ~~~~~~l~-~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 104 (428)
...+..++ .++|.+.+. .++++++|+||++||++|+.+.|.|.++++.++ .+.|+.||++++++++++|+|.++|
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~P 101 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELSDFSASWEIKATP 101 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCEES
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccHHHHHHcCCCccc
Confidence 45677775 678885543 358899999999999999999999999999985 5899999999999999999999999
Q ss_pred EEEEEeCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 105 TIKVFVPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 105 ~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
+++++.+|+.+.++.|. +.+.+.+++.+.++
T Consensus 102 t~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 102 TFFFLRDGQQVDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp EEEEEETTEEEEEEESC-CHHHHHHHHHHHHH
T ss_pred EEEEEcCCeEEEEEeCC-CHHHHHHHHHHHhc
Confidence 99999999888888888 88889999987764
No 115
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.68 E-value=5.8e-16 Score=127.77 Aligned_cols=110 Identities=16% Similarity=0.270 Sum_probs=95.0
Q ss_pred CCCCcEEeCccchHHHHhhc-CCeEEEEEEC-------CCChhHhhHHHHHHHHHHHhc-----CCeEEEEEeCCCchhH
Q 014216 158 DSNESIELNSSNFDELVLKS-KDLWIVEFFA-------PWCGHCKKLAPEWKKAANNLK-----GKVKLGHVDCDSEKSL 224 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~-~~~~~v~f~~-------~~c~~c~~~~~~~~~~a~~~~-----~~~~f~~v~~~~~~~~ 224 (428)
....++++++.+|.+.+... +.+++|.|++ .||++|+.+.|.|+++|+.+. +++.|+.||+++++++
T Consensus 16 ~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~l 95 (178)
T 3ga4_A 16 DDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQL 95 (178)
T ss_dssp CTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHH
T ss_pred ccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHH
Confidence 35679999999999876433 4479999999 499999999999999999998 8899999999999999
Q ss_pred hhhcCCCcCcEEEEEcCCCCCc-----------ccc---cC-CCCHHHHHHHHHHHHh
Q 014216 225 MSKFNVQGFPTILVFGADKDSP-----------IPY---EG-ARTAGAIESFALEQLE 267 (428)
Q Consensus 225 ~~~~~v~~~P~i~~~~~~~~~~-----------~~y---~g-~~~~~~i~~fi~~~~~ 267 (428)
+++|||+++|++++|++++... ..| .| ..+.+.|.+||.+.+.
T Consensus 96 a~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~ 153 (178)
T 3ga4_A 96 VKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILN 153 (178)
T ss_dssp HHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHT
T ss_pred HHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcC
Confidence 9999999999999998775433 445 35 7899999999999875
No 116
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.68 E-value=3.8e-16 Score=119.72 Aligned_cols=105 Identities=26% Similarity=0.542 Sum_probs=94.5
Q ss_pred CCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEE
Q 014216 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (428)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~ 239 (428)
..+..++.+++...+...+++++|.||++||++|+.+.+.+.++++.+.+.+.|+.+|++.++.++++|++.++|++++|
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEEEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEEEE
Confidence 35889999999988767788999999999999999999999999999988899999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 240 GADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
+ +++....+.|..+.+.+.+|+.++
T Consensus 82 ~-~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 82 R-DGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp E-TTEEEEEEESCCCHHHHHHHHHHT
T ss_pred e-CCEEEEEecCCCCHHHHHHHHHhc
Confidence 5 455566788999999999998764
No 117
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.68 E-value=4.1e-16 Score=136.57 Aligned_cols=145 Identities=14% Similarity=0.229 Sum_probs=114.2
Q ss_pred CCCCcEEeCccchHHHhhcCCCeEEEEEE--CCCChhhhhhhHHHHHHHHHhc---CceEEEEEcCcc-----cHhHHHH
Q 014216 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFY--APWCGHCQALTPIWEKAATVLK---GVATVAALDANE-----HQSLAQE 97 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~~~~~~lv~f~--~~~C~~C~~~~~~~~~~~~~~~---~~v~~~~vd~~~-----~~~l~~~ 97 (428)
....+..++..+|+. ++.+++++||.|| +|||+ +.|.|++++..+. +.+.|+.|||++ ++++|++
T Consensus 14 ~~~~v~~Lt~~nF~~-vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~ 88 (248)
T 2c0g_A 14 TCTGCVDLDELSFEK-TVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDR 88 (248)
T ss_dssp -CTTCEECCTTTHHH-HHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHH
T ss_pred CCCCcEECCHHHHHH-HHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHH
Confidence 346688999999995 6778899999999 99998 9999999999984 479999999998 8999999
Q ss_pred cCCc--cccEEEEEeCCCC--Cccc--cCCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchH
Q 014216 98 YGIR--GFPTIKVFVPGKP--PVDY--QGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFD 171 (428)
Q Consensus 98 ~~v~--~~P~~~~~~~g~~--~~~~--~g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 171 (428)
|+|+ ++||+++|+ |+. +.+| .|.++.+.|..|+.+.+. ... .... .-..+.
T Consensus 89 ~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~---------~~~--------~~~g-----~i~~~d 145 (248)
T 2c0g_A 89 YKVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTP---------LYI--------GRDG-----CIKEFN 145 (248)
T ss_dssp TTCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSS---------CCC--------CCTT-----CCHHHH
T ss_pred hCCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhc---------ccc--------CCCC-----chHHHH
Confidence 9999 999999999 873 5778 899999999999987741 000 0011 112233
Q ss_pred HHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhc
Q 014216 172 ELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK 208 (428)
Q Consensus 172 ~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~ 208 (428)
..+ ..|.+.+|..|..+....++++..+.
T Consensus 146 ~l~--------~~f~~~~~~~~~~~~~~~~~~~~~l~ 174 (248)
T 2c0g_A 146 EVL--------KNYANIPDAEQLKLIEKLQAKQEQLT 174 (248)
T ss_dssp HHH--------TTGGGSCHHHHHHHHHHHHHHHHHCC
T ss_pred HHH--------HHHhcccchhHHHHHHHHHHHHHHcc
Confidence 322 12567788888888899998888774
No 118
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.68 E-value=3.1e-16 Score=126.75 Aligned_cols=109 Identities=27% Similarity=0.501 Sum_probs=96.3
Q ss_pred CCCCCcEEeCccchHHHHhh-----------cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHh
Q 014216 157 SDSNESIELNSSNFDELVLK-----------SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLM 225 (428)
Q Consensus 157 ~~~~~v~~l~~~~~~~~~~~-----------~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~ 225 (428)
.....+..++..+|...+.+ .+++++|.||++||++|+.+.+.|.++++.+.+++.|+.||++.+.+++
T Consensus 19 ~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 98 (141)
T 3hxs_A 19 KPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELA 98 (141)
T ss_dssp ----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHH
T ss_pred CCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHH
Confidence 35677999999999988865 4679999999999999999999999999999989999999999999999
Q ss_pred hhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 226 SKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 226 ~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
++|+|.++|++++|..++. ...+.|..+.+.|.+|+.+.+
T Consensus 99 ~~~~v~~~Pt~~~~~~~g~-~~~~~G~~~~~~l~~~l~~~l 138 (141)
T 3hxs_A 99 RDFGIQSIPTIWFVPMKGE-PQVNMGALSKEQLKGYIDKVL 138 (141)
T ss_dssp HHTTCCSSSEEEEECSSSC-CEEEESCCCHHHHHHHHHHTT
T ss_pred HHcCCCCcCEEEEEeCCCC-EEEEeCCCCHHHHHHHHHHHH
Confidence 9999999999999976654 458899999999999998775
No 119
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.67 E-value=2.7e-16 Score=123.19 Aligned_cols=108 Identities=16% Similarity=0.208 Sum_probs=95.6
Q ss_pred CCCcEEeCccchHHHHhhcCCeEEEEEECCCC--hhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEE
Q 014216 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWC--GHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTI 236 (428)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c--~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i 236 (428)
......+++.+|.+.+.....+++|.||++|| ++|+.+.|.+.++++.|.+++.|+.||.+++++++.+|+|+++||+
T Consensus 14 ~~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPTl 93 (137)
T 2qsi_A 14 PNAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPSL 93 (137)
T ss_dssp ---CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSEE
T ss_pred hcCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCEE
Confidence 34567999999999886555699999999999 9999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 237 LVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 237 ~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
++|++| +..-+..|..+.+.|.+++.+++.
T Consensus 94 ilFkdG-~~v~~~vG~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 94 AVVQPE-RTLGVIAKIQDWSSYLAQIGAMLA 123 (137)
T ss_dssp EEEECC-EEEEEEESCCCHHHHHHHHHHHHH
T ss_pred EEEECC-EEEEEEeCCCCHHHHHHHHHHHhc
Confidence 999855 456777899999999999988763
No 120
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.67 E-value=3e-16 Score=121.41 Aligned_cols=104 Identities=24% Similarity=0.492 Sum_probs=94.1
Q ss_pred CcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEc
Q 014216 161 ESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFG 240 (428)
Q Consensus 161 ~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~ 240 (428)
++++++.+++.+.+ .+++++|.||++||++|+.+.+.+.++++.+.+.+.|+.||++.+.+++++|++.++|++++|+
T Consensus 2 ~v~~l~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 79 (112)
T 2voc_A 2 AIVKATDQSFSAET--SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLK 79 (112)
T ss_dssp CCEECCTTTHHHHH--SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEEEE
T ss_pred CeEEecHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEe
Confidence 36788999999887 7789999999999999999999999999999888999999999999999999999999999995
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 241 ADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 241 ~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
++.....+.|..+.+++.+|+.+++.
T Consensus 80 -~G~~~~~~~G~~~~~~l~~~l~~~~~ 105 (112)
T 2voc_A 80 -DGEVVETSVGFKPKEALQELVNKHLL 105 (112)
T ss_dssp -TTEEEEEEESCCCHHHHHHHHHTTSC
T ss_pred -CCEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 55556778999999999999988753
No 121
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.67 E-value=5.6e-16 Score=120.44 Aligned_cols=108 Identities=26% Similarity=0.496 Sum_probs=97.2
Q ss_pred CCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEE
Q 014216 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILV 238 (428)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~ 238 (428)
...+..++.+++.+.+...+++++|.||++||++|+.+.+.|.++++.+.+++.|+.+|++.+.+++++|++.++|++++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 85 (115)
T 1thx_A 6 SKGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRL 85 (115)
T ss_dssp CCSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEEE
T ss_pred cCceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEEE
Confidence 45689999999998876778899999999999999999999999999998889999999999999999999999999999
Q ss_pred EcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 239 FGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 239 ~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
|+ ++.....+.|..+.+.+.+|+.+.+.
T Consensus 86 ~~-~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 86 VK-GEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EE-TTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred Ec-CCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 95 45555678899999999999988763
No 122
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.67 E-value=4.2e-16 Score=119.22 Aligned_cols=103 Identities=25% Similarity=0.472 Sum_probs=93.9
Q ss_pred CCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEE
Q 014216 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (428)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~ 239 (428)
..+.+++.+++.+.+ .+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.+++++++|+++++|++++|
T Consensus 3 ~~v~~l~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (106)
T 3die_A 3 MAIVKVTDADFDSKV--ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVF 80 (106)
T ss_dssp CCCEECCTTTHHHHS--CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEEEE
T ss_pred cceEECCHHHHHHHh--cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEEEE
Confidence 468899999999887 788999999999999999999999999999998899999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 240 GADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
+ +++....+.|..+.+++.+++.++
T Consensus 81 ~-~G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 81 K-DGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp E-TTEEEEEEESCCCHHHHHHHHHTT
T ss_pred e-CCeEEEEEeCCCCHHHHHHHHHHh
Confidence 7 445566789999999999998754
No 123
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.67 E-value=4.8e-16 Score=123.25 Aligned_cols=106 Identities=29% Similarity=0.604 Sum_probs=95.7
Q ss_pred CCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEE
Q 014216 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (428)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~ 239 (428)
..+..++.+++.+.+...+++++|.||++||++|+.+.+.|.++++.+.+++.|+.||++.+++++++|+|.++|++++|
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 101 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 101 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEEEE
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 45889999999987767788999999999999999999999999999988899999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 240 GADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+ +++....+.|..+.+.|.+|+.+.+
T Consensus 102 ~-~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 102 K-NGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp E-TTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred e-CCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 5 4555567889999999999998764
No 124
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.67 E-value=4e-16 Score=124.92 Aligned_cols=103 Identities=16% Similarity=0.182 Sum_probs=87.1
Q ss_pred CCCCcEEeCccchHHHhhcC--CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccE
Q 014216 28 SSSPVVQLTPNNFKSKVLNA--NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPT 105 (428)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~ 105 (428)
....+..++.++|...+... +++++|+||++||++|+.+.|.|.+++..+. .+.|+.||+++.. ++|+|.++||
T Consensus 8 ~~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~---~~~~i~~~Pt 83 (135)
T 2dbc_A 8 KFGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI---EHYHDNCLPT 83 (135)
T ss_dssp CCCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC---SSCCSSCCSE
T ss_pred CCCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc---ccCCCCCCCE
Confidence 34668899999999666543 3699999999999999999999999999986 4899999999875 7899999999
Q ss_pred EEEEeCCCCCccccCCC-------CcchHHHHHHHH
Q 014216 106 IKVFVPGKPPVDYQGAR-------DVKPIAEFALQQ 134 (428)
Q Consensus 106 ~~~~~~g~~~~~~~g~~-------~~~~l~~~i~~~ 134 (428)
+++|++|+.+.++.|.. +.+.|.+++.+.
T Consensus 84 ~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 84 IFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp EEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 99999999888888876 566677777654
No 125
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.66 E-value=1.4e-15 Score=121.96 Aligned_cols=110 Identities=27% Similarity=0.495 Sum_probs=97.2
Q ss_pred CCCcEEeCccchHHHHhh-----------cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhh
Q 014216 159 SNESIELNSSNFDELVLK-----------SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSK 227 (428)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~-----------~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~ 227 (428)
...+..++.++|.+.+.. .+++++|.||++||++|+.+.+.|.++++.+.+.+.|+.||++.+.+++++
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~ 87 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGA 87 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHH
Confidence 456889999999988754 457999999999999999999999999999988899999999999999999
Q ss_pred cCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhhc
Q 014216 228 FNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETN 269 (428)
Q Consensus 228 ~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~ 269 (428)
|++.++|++++|..+++ ...+.|..+.+.|.+|+.+.+...
T Consensus 88 ~~v~~~Pt~~~~~~~G~-~~~~~G~~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 88 FGIRSIPSILFIPMEGK-PEMAQGAMPKASFKKAIDEFLLKK 128 (136)
T ss_dssp TTCCSSCEEEEECSSSC-CEEEESCCCHHHHHHHHHHHHTSC
T ss_pred cCCCCCCEEEEECCCCc-EEEEeCCCCHHHHHHHHHHHhhcc
Confidence 99999999999954554 447899999999999999887543
No 126
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.66 E-value=4.9e-16 Score=122.25 Aligned_cols=108 Identities=33% Similarity=0.719 Sum_probs=96.3
Q ss_pred CCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEE
Q 014216 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILV 238 (428)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~ 238 (428)
++.+..++.+++.+.+...+++++|.||++||++|+.+.+.|.++++.+.+.+.|+.||++.+.+++++|++.++|++++
T Consensus 2 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 81 (122)
T 3aps_A 2 PQASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKL 81 (122)
T ss_dssp CCCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CcchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEEE
Confidence 35688999999987776778899999999999999999999999999999899999999999999999999999999999
Q ss_pred EcCCCCCcccccCC----CCHHHHHHHHHHHHh
Q 014216 239 FGADKDSPIPYEGA----RTAGAIESFALEQLE 267 (428)
Q Consensus 239 ~~~~~~~~~~y~g~----~~~~~i~~fi~~~~~ 267 (428)
|+.++. ...+.|. .+.+.|.+|+.+.+.
T Consensus 82 ~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 82 YQYERA-KKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEEGG-GTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred EeCCCc-cceeeccccCcCCHHHHHHHHHHHHH
Confidence 976554 5667765 799999999988864
No 127
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.66 E-value=4.8e-16 Score=125.43 Aligned_cols=110 Identities=21% Similarity=0.361 Sum_probs=99.5
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEE
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~ 237 (428)
....+..++.+++.+.+...+++++|.||++||++|+.+.+.|.++++.+.+++.|+.||++.+..++++|+|.++|+++
T Consensus 4 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 83 (140)
T 3hz4_A 4 NGSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFK 83 (140)
T ss_dssp CTTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEE
T ss_pred CCcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEE
Confidence 35679999999999777778899999999999999999999999999999989999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHHHhh
Q 014216 238 VFGADKDSPIPYEGARTAGAIESFALEQLET 268 (428)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (428)
+|++ ++....+.|..+.+.|.+|+.+.+..
T Consensus 84 ~~~~-G~~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 84 FFCH-GRPVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp EEET-TEEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEeC-CcEEEEEcCCCCHHHHHHHHHHHhcc
Confidence 9964 44566889999999999999888743
No 128
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.66 E-value=3.9e-16 Score=121.59 Aligned_cols=106 Identities=23% Similarity=0.364 Sum_probs=91.4
Q ss_pred CCCCCcEEeCccchHHHHhh-cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcE
Q 014216 157 SDSNESIELNSSNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (428)
Q Consensus 157 ~~~~~v~~l~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~ 235 (428)
+..+.....+.++|.+.+.. .+++++|.||++||++|+.+.+.|.++++.+.+ +.|+.||++.+++++++|+|.++|+
T Consensus 9 ~~~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt 87 (116)
T 3qfa_C 9 HHGSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSMPT 87 (116)
T ss_dssp ---CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred cCCcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCccccE
Confidence 35666777888999988743 678999999999999999999999999999977 9999999999999999999999999
Q ss_pred EEEEcCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 236 ILVFGADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 236 i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
+++|+ +++....+.|. +.+.|.+++.+.
T Consensus 88 ~~~~~-~G~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 88 FQFFK-KGQKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp EEEES-SSSEEEEEESC-CHHHHHHHHHHH
T ss_pred EEEEe-CCeEEEEEcCC-CHHHHHHHHHHh
Confidence 99996 44556678888 999999998765
No 129
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.66 E-value=8.3e-16 Score=118.20 Aligned_cols=106 Identities=29% Similarity=0.570 Sum_probs=96.1
Q ss_pred CCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEE
Q 014216 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILV 238 (428)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~ 238 (428)
.+.+..++.+++.+.+ ..+++++|.||++||++|+.+.+.+.++++.+.+.+.|+.+|++.++.++++|++.++|++++
T Consensus 3 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 81 (109)
T 3tco_A 3 EDVTLVLTEENFDEVI-RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLI 81 (109)
T ss_dssp CCCCEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCeEEEecHHHHHHHH-hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEEEE
Confidence 4678899999999886 568899999999999999999999999999999899999999999999999999999999999
Q ss_pred EcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 239 FGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 239 ~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
|+ ++.....+.|..+.+.|..++.+.+
T Consensus 82 ~~-~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 82 FV-NGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EE-TTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred Ec-CCcEEEeeeccCCHHHHHHHHHHHh
Confidence 95 4555677899999999999998764
No 130
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.66 E-value=9.1e-16 Score=123.83 Aligned_cols=110 Identities=39% Similarity=0.744 Sum_probs=98.0
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC---eEEEEEeCCCchhHhhhcCCCcCc
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK---VKLGHVDCDSEKSLMSKFNVQGFP 234 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~---~~f~~v~~~~~~~~~~~~~v~~~P 234 (428)
....+..++.+++...+ ..+++++|.||++||++|+.+.+.|.++++.+.+. +.|+.||++.+..++++|+|..+|
T Consensus 15 ~~~~v~~l~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 93 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYP 93 (140)
T ss_dssp EETTEEECCTTTHHHHH-TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSS
T ss_pred CCCCCEEcChHhHHHHH-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccC
Confidence 45678999999999876 56789999999999999999999999999999875 999999999999999999999999
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhhcC
Q 014216 235 TILVFGADKDSPIPYEGARTAGAIESFALEQLETNV 270 (428)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~ 270 (428)
++++|++ ++ ...|.|..+.+.|.+|+.+++....
T Consensus 94 t~~~~~~-G~-~~~~~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 94 TIKILKK-GQ-AVDYDGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp EEEEEET-TE-EEECCSCCCHHHHHHHHHHHHSSSC
T ss_pred eEEEEEC-Cc-EEEcCCCCCHHHHHHHHHHhcCCCC
Confidence 9999964 44 7789999999999999999875443
No 131
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.65 E-value=8.3e-16 Score=122.23 Aligned_cols=106 Identities=14% Similarity=0.133 Sum_probs=90.3
Q ss_pred cEEeCc-cchHHHHhh-cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEE
Q 014216 162 SIELNS-SNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (428)
Q Consensus 162 v~~l~~-~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~ 239 (428)
+..++. ++|.+.+.. .+++++|.||++||++|+.+.|.+.++|+++.+.+.|+.||.++.++++++|+|++.||+++|
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fF 102 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFF 102 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEE
Confidence 666765 778777763 678999999999999999999999999999998899999999999999999999999999999
Q ss_pred cCCCCCc-c-------cccCCCC-HHHHHHHHHHHHh
Q 014216 240 GADKDSP-I-------PYEGART-AGAIESFALEQLE 267 (428)
Q Consensus 240 ~~~~~~~-~-------~y~g~~~-~~~i~~fi~~~~~ 267 (428)
+++.... - +..|... .++|.++|..++.
T Consensus 103 k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 103 YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHH
Confidence 8654311 1 5678776 8899999877753
No 132
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.65 E-value=1e-15 Score=117.29 Aligned_cols=105 Identities=30% Similarity=0.521 Sum_probs=93.8
Q ss_pred CcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEc
Q 014216 161 ESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFG 240 (428)
Q Consensus 161 ~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~ 240 (428)
.+..++.+++.+.+...+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.+++++++|++.++|++++++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFK 81 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEEES
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEEEe
Confidence 36788999999877677889999999999999999999999999999888999999999999999999999999999996
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 241 ADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 241 ~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+++....+.|..+.+.+.+++.+.+
T Consensus 82 -~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 82 -GGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp -SSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred -CCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 4445567889999999999987753
No 133
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.65 E-value=1.2e-15 Score=117.92 Aligned_cols=106 Identities=24% Similarity=0.476 Sum_probs=95.2
Q ss_pred CCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEE
Q 014216 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (428)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~ 239 (428)
..+..++.+++.+.+.+.+++++|.||++||++|+.+.+.+.++++.+.+.+.|+.+|++.+.+++++|++.++|++++|
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 84 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVY 84 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEEEE
Confidence 35789999999888777788999999999999999999999999999988899999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 240 GADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+ +++....+.|..+.+.+.+++.+.+
T Consensus 85 ~-~G~~~~~~~G~~~~~~l~~~l~~~l 110 (112)
T 1t00_A 85 Q-GGEVAKTIVGAKPKAAIVRDLEDFI 110 (112)
T ss_dssp E-TTEEEEEEESCCCHHHHHHHTHHHH
T ss_pred e-CCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 6 4444567889999999999988765
No 134
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.65 E-value=1.5e-16 Score=127.12 Aligned_cols=103 Identities=18% Similarity=0.410 Sum_probs=87.7
Q ss_pred CCCcEEeCc-cchHHHhhcC--CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccE
Q 014216 29 SSPVVQLTP-NNFKSKVLNA--NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPT 105 (428)
Q Consensus 29 ~~~~~~l~~-~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~ 105 (428)
...+.++++ ++|. .++.+ +++++|.||++||++|+.+.|.|.++++.+ .+.|+.||++++.+++++|+|.++|+
T Consensus 19 ~~~v~~l~~~~~~~-~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt 95 (133)
T 3cxg_A 19 QSIYIELKNTGSLN-QVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHPKLNDQHNIKALPT 95 (133)
T ss_dssp TEEEEECCCTTHHH-HHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CccEEEecChhHHH-HHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchHHHHHhcCCCCCCE
Confidence 456788886 6777 44443 579999999999999999999999988876 48999999999999999999999999
Q ss_pred EEEEe--CCC--CCccccCCCCcchHHHHHHHHH
Q 014216 106 IKVFV--PGK--PPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 106 ~~~~~--~g~--~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+++|+ +|+ .+.++.|. +.+.|.+++.+.+
T Consensus 96 ~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l 128 (133)
T 3cxg_A 96 FEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYC 128 (133)
T ss_dssp EEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHS
T ss_pred EEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHH
Confidence 99996 787 66788887 7888988888764
No 135
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.64 E-value=1.6e-15 Score=117.05 Aligned_cols=104 Identities=35% Similarity=0.803 Sum_probs=93.0
Q ss_pred CCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhc---CCeEEEEEeCCCchhHhhhcCCCcCcE
Q 014216 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK---GKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (428)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~---~~~~f~~v~~~~~~~~~~~~~v~~~P~ 235 (428)
...+..++.+++.+.+. +++++|.||++||++|+.+.+.|.++++.+. ..+.|+.+|++.+++++++|+++++|+
T Consensus 4 ~~~v~~l~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt 81 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA--EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPT 81 (111)
T ss_dssp -CCSEECCTTTHHHHHH--SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCcceEcChhhHHHHhc--CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccE
Confidence 45789999999999875 7799999999999999999999999999876 369999999999999999999999999
Q ss_pred EEEEcCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 236 ILVFGADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 236 i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
+++|+++ +....+.|..+.+.|.+|+.++
T Consensus 82 ~~~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 82 LLLFRGG-KKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEEETT-EEEEEECSCCSHHHHHHHHHHH
T ss_pred EEEEeCC-cEEEeccCCcCHHHHHHHHHhc
Confidence 9999644 4567889999999999999875
No 136
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.64 E-value=1.3e-15 Score=119.51 Aligned_cols=106 Identities=32% Similarity=0.679 Sum_probs=93.1
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcC-----CeEEEEEeCCCchhHhhhcCCCc
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-----KVKLGHVDCDSEKSLMSKFNVQG 232 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~-----~~~f~~v~~~~~~~~~~~~~v~~ 232 (428)
....+..++.+++...+...+++++|.||++||++|+.+.+.|.++++.+.+ .+.|+.||++.++ +++ +|.+
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~ 81 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG 81 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc
Confidence 4567899999999987656778999999999999999999999999999987 7999999998766 555 9999
Q ss_pred CcEEEEEcCCCCC-cccccCCCCHHHHHHHHHHHH
Q 014216 233 FPTILVFGADKDS-PIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 233 ~P~i~~~~~~~~~-~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+|++++|+.++.. ...|.|..+.+.|.+|+.+++
T Consensus 82 ~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 82 FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENG 116 (121)
T ss_dssp SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTS
T ss_pred CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhcc
Confidence 9999999876553 678999999999999998875
No 137
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.64 E-value=1e-15 Score=116.84 Aligned_cols=102 Identities=23% Similarity=0.509 Sum_probs=90.2
Q ss_pred cEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcC
Q 014216 162 SIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGA 241 (428)
Q Consensus 162 v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~ 241 (428)
++.++.+++... ...+++++|.||++||++|+.+.+.+.++++.+.+.+.|+.+|++.+.+++++|++.++|++++|+
T Consensus 2 v~~l~~~~~~~~-~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~- 79 (105)
T 1nsw_A 2 TMTLTDANFQQA-IQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFK- 79 (105)
T ss_dssp CEEECTTTHHHH-HSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEE-
T ss_pred ceeccHHhHHHH-HhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEEe-
Confidence 678899999855 467789999999999999999999999999999888999999999999999999999999999995
Q ss_pred CCCCcccccCCCCHHHHHHHHHHH
Q 014216 242 DKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 242 ~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
+++....+.|..+.+.+.+++.+.
T Consensus 80 ~G~~~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 80 GGRPVKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp TTEEEEEEESCCCHHHHHHHTTTT
T ss_pred CCeEEEEEecCCCHHHHHHHHHHH
Confidence 455566788999999999887554
No 138
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.63 E-value=2.8e-16 Score=123.63 Aligned_cols=105 Identities=11% Similarity=0.107 Sum_probs=95.7
Q ss_pred CcEEeCccchHHHHhhcCCeEEEEEECCC--ChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCCchhHhhhcCCCcCcEEE
Q 014216 161 ESIELNSSNFDELVLKSKDLWIVEFFAPW--CGHCKKLAPEWKKAANNLKGK-VKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (428)
Q Consensus 161 ~v~~l~~~~~~~~~~~~~~~~~v~f~~~~--c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~~~~~~~~~~v~~~P~i~ 237 (428)
.+..+++.+|.+.+ .+..+++|.|+++| |++|+.+.|.+.++|+.|.++ +.|+.||.+++++++.+|||+++||++
T Consensus 18 g~~~~t~~~F~~~v-~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTli 96 (140)
T 2qgv_A 18 GWTPVSESRLDDWL-TQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATL 96 (140)
T ss_dssp TCEECCHHHHHHHH-HTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEE
T ss_pred CCccCCHHHHHHHH-hCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEE
Confidence 77899999999988 46778999999999 999999999999999999999 999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 238 VFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
+|++| +..-+..|..+.+.|.+++.+++.
T Consensus 97 lFk~G-~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 97 VFTGG-NYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEECC-EEEEEEecCCCHHHHHHHHHHHhc
Confidence 99865 456677899999999999988874
No 139
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.63 E-value=2e-16 Score=149.95 Aligned_cols=107 Identities=26% Similarity=0.410 Sum_probs=90.0
Q ss_pred ccccccCCCCCcEEeCccchHHHhhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhc---C-----ceEEEEEcCccc
Q 014216 21 LSDALYGSSSPVVQLTPNNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLK---G-----VATVAALDANEH 91 (428)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~---~-----~v~~~~vd~~~~ 91 (428)
.....+.....+..++.++|+..+.. .+++++|+|||+||++|+++.|.|.++++.+. + .+.|+.|||+++
T Consensus 14 ~~~~l~~~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~ 93 (470)
T 3qcp_A 14 PRPGLFHLDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASE 93 (470)
T ss_dssp CCCCSCTTCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTC
T ss_pred ccccccCCCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCC
Confidence 34445556788999999999954432 24799999999999999999999999999987 2 599999999999
Q ss_pred HhHHHHcCCccccEEEEEeCCCC--CccccCCCCcchH
Q 014216 92 QSLAQEYGIRGFPTIKVFVPGKP--PVDYQGARDVKPI 127 (428)
Q Consensus 92 ~~l~~~~~v~~~P~~~~~~~g~~--~~~~~g~~~~~~l 127 (428)
+++|++|+|.++||+++|.+|+. ..+|.|.++.+.+
T Consensus 94 ~~la~~y~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L 131 (470)
T 3qcp_A 94 VDLCRKYDINFVPRLFFFYPRDSCRSNEECGTSSLEHV 131 (470)
T ss_dssp HHHHHHTTCCSSCEEEEEEESSCCCTTSCCCCCCEEEE
T ss_pred HHHHHHcCCCccCeEEEEECCCceEEEEeeCCCCHHHH
Confidence 99999999999999999976543 7789998777653
No 140
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.63 E-value=2e-15 Score=115.21 Aligned_cols=103 Identities=27% Similarity=0.561 Sum_probs=92.3
Q ss_pred cEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcC
Q 014216 162 SIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGA 241 (428)
Q Consensus 162 v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~ 241 (428)
+..++.+++.+.+...+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.+++++++|++.++|++++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~- 80 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFK- 80 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEE-
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEEe-
Confidence 5678899999877677889999999999999999999999999999888999999999999999999999999999996
Q ss_pred CCCCcccccCCCCHHHHHHHHHHH
Q 014216 242 DKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 242 ~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
++.....+.|..+.+.+.+++.+.
T Consensus 81 ~g~~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 81 NGERKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp TTEEEEEEEECCCHHHHHHHHHHH
T ss_pred CCeEEEEEecCCCHHHHHHHHHhh
Confidence 444456678999999999998765
No 141
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.63 E-value=9.9e-16 Score=122.45 Aligned_cols=110 Identities=29% Similarity=0.617 Sum_probs=95.9
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhc--CCeEEEEEeCCCchhHhhhcCCCcCcE
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK--GKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~--~~~~f~~v~~~~~~~~~~~~~v~~~P~ 235 (428)
....+..++..++...+...+++++|.||++||++|+.+.+.|.++++.+. +.+.|+.||++.+..++++|+|.++|+
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 84 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPT 84 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSE
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCE
Confidence 456799999999998775567899999999999999999999999999998 469999999999999999999999999
Q ss_pred EEEEcCCCCC-ccccc-CCCCHHHHHHHHHHHHh
Q 014216 236 ILVFGADKDS-PIPYE-GARTAGAIESFALEQLE 267 (428)
Q Consensus 236 i~~~~~~~~~-~~~y~-g~~~~~~i~~fi~~~~~ 267 (428)
+++|+.++.. .+.|. |..+.+.|.+|+.+++.
T Consensus 85 ~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~ 118 (133)
T 2dj3_A 85 IYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHAT 118 (133)
T ss_dssp EEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSS
T ss_pred EEEEeCCCcccceEecCCCcCHHHHHHHHHHhcc
Confidence 9999765532 34677 55899999999998864
No 142
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.63 E-value=2e-15 Score=123.83 Aligned_cols=107 Identities=25% Similarity=0.594 Sum_probs=96.2
Q ss_pred CCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEE
Q 014216 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILV 238 (428)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~ 238 (428)
...+.+++..++.+.+ ..+++++|.||++||++|+.+.+.|+++++.+.+++.|+.||++.++.++++|+|+++|++++
T Consensus 46 ~~~~~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 124 (155)
T 2ppt_A 46 TGKVAGIDPAILARAE-RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFIL 124 (155)
T ss_dssp CSSEEECCHHHHHHHT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEEEE
T ss_pred CCCCccCCHHHHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEEEE
Confidence 4457889999999887 678899999999999999999999999999999889999999999999999999999999999
Q ss_pred EcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 239 FGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 239 ~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
|+ +++....+.|..+.+.|.+|+.+.+.
T Consensus 125 ~~-~G~~~~~~~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 125 FH-KGRELARAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp EE-TTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred Ee-CCeEEEEecCCCCHHHHHHHHHHHhc
Confidence 96 44456678899999999999988763
No 143
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.63 E-value=3.2e-15 Score=121.85 Aligned_cols=108 Identities=27% Similarity=0.594 Sum_probs=98.4
Q ss_pred CCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEE
Q 014216 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILV 238 (428)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~ 238 (428)
...+..++.+++...+ ..+++++|.||++||++|+.+.+.|.++++.+.+++.|+.||++.++.++++|+|.++|++++
T Consensus 37 ~~~v~~l~~~~~~~~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 115 (148)
T 3p2a_A 37 DGEVINATAETLDKLL-QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTIML 115 (148)
T ss_dssp CCCCEECCTTTHHHHT-TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cCCceecCHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCccCEEEE
Confidence 4578999999999887 778899999999999999999999999999998899999999999999999999999999999
Q ss_pred EcCCCCCcccccCCCCHHHHHHHHHHHHhh
Q 014216 239 FGADKDSPIPYEGARTAGAIESFALEQLET 268 (428)
Q Consensus 239 ~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (428)
|+ +++....|.|..+.+.|.+|+.+.+..
T Consensus 116 ~~-~G~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 116 YR-NGKMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EE-TTEEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred EE-CCeEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 97 444566789999999999999998753
No 144
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.63 E-value=2.7e-15 Score=114.11 Aligned_cols=102 Identities=29% Similarity=0.556 Sum_probs=91.8
Q ss_pred cEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcC
Q 014216 162 SIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGA 241 (428)
Q Consensus 162 v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~ 241 (428)
|..++.+++.+.+ ..+++++|.||++||++|+.+.+.+.++++.+.+ +.|+.+|++.+.+++++|++.++|++++|+
T Consensus 1 V~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~- 77 (104)
T 2e0q_A 1 VIHLDSKNFDSFL-ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSLPTVIFFK- 77 (104)
T ss_dssp CEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSCEEEEEE-
T ss_pred CeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHHHHHhCCccccCEEEEEE-
Confidence 4678889999887 6678999999999999999999999999999987 999999999999999999999999999995
Q ss_pred CCCCcccccCCCCHHHHHHHHHHHH
Q 014216 242 DKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 242 ~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+++....+.|..+.+.+.+|+.+.+
T Consensus 78 ~g~~~~~~~g~~~~~~l~~~l~~~l 102 (104)
T 2e0q_A 78 DGEPVDEIIGAVPREEIEIRIKNLL 102 (104)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CCeEhhhccCCCCHHHHHHHHHHHh
Confidence 4445567889999999999998875
No 145
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.62 E-value=5.5e-15 Score=127.92 Aligned_cols=108 Identities=31% Similarity=0.778 Sum_probs=98.5
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEE
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~ 237 (428)
....+..++..++...+ ..+++++|.||++||++|+.+.+.|.++++.+.+.+.|+.||++.+.+++++|+|.++|+++
T Consensus 95 ~~~~v~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 173 (210)
T 3apq_A 95 DDPEIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLF 173 (210)
T ss_dssp TCTTSEECCHHHHHHHH-HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CCCceEEecHHHHHHHH-ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeEE
Confidence 35678999999999887 67889999999999999999999999999999988999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 238 VFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
+|+ ++.....+.|..+.+.|.+|+.+.+.
T Consensus 174 ~~~-~G~~~~~~~G~~~~~~l~~~i~~~l~ 202 (210)
T 3apq_A 174 IFR-SGMAAVKYNGDRSKESLVAFAMQHVR 202 (210)
T ss_dssp EEC-TTSCCEECCSCCCHHHHHHHHHHHHH
T ss_pred EEE-CCCceeEecCCCCHHHHHHHHHHhCc
Confidence 995 44557889999999999999999874
No 146
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.62 E-value=2.7e-15 Score=115.29 Aligned_cols=104 Identities=27% Similarity=0.550 Sum_probs=92.8
Q ss_pred CcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEc
Q 014216 161 ESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFG 240 (428)
Q Consensus 161 ~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~ 240 (428)
.+..++.+++...+ ..+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.+++++++|++.++|++++|+
T Consensus 2 ~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (109)
T 2yzu_A 2 KPIEVTDQNFDETL-GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVILFK 80 (109)
T ss_dssp CCEECCTTTHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred cceEccHhHHHHHh-cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEEEe
Confidence 46789999999654 67889999999999999999999999999999988999999999999999999999999999995
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 241 ADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 241 ~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
++.....+.|..+.+.+.+|+.+.+
T Consensus 81 -~g~~~~~~~g~~~~~~l~~~l~~~l 105 (109)
T 2yzu_A 81 -DGQPVEVLVGAQPKRNYQAKIEKHL 105 (109)
T ss_dssp -TTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred -CCcEeeeEeCCCCHHHHHHHHHHHh
Confidence 4444567889999999999987764
No 147
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=8.2e-16 Score=122.39 Aligned_cols=103 Identities=18% Similarity=0.415 Sum_probs=88.1
Q ss_pred EEeCccchHHHhh---cCCCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCceEEEEEcCc--ccHhHHHHcCCcccc
Q 014216 33 VQLTPNNFKSKVL---NANGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDAN--EHQSLAQEYGIRGFP 104 (428)
Q Consensus 33 ~~l~~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~P 104 (428)
..++..+|...+. .++++++|.||++||++|+.+.|.+ ..+.+.++..+.++.+|++ .+..++++|+|.++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~P 88 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYP 88 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSC
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCC
Confidence 4456677775442 3588999999999999999999999 7777777777889999998 578999999999999
Q ss_pred EEEEE-eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 105 TIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 105 ~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+++++ .+|+.+.++.|..+.+.+.+++.+.+
T Consensus 89 t~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~ 120 (130)
T 2kuc_A 89 TLLFINSSGEVVYRLVGAEDAPELLKKVKLGV 120 (130)
T ss_dssp EEEEECTTSCEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEECCCCcEEEEecCCCCHHHHHHHHHHHH
Confidence 99999 67877778999999999999998875
No 148
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.62 E-value=1.8e-16 Score=126.19 Aligned_cols=109 Identities=20% Similarity=0.476 Sum_probs=93.8
Q ss_pred ccCCCCCcEEeC-ccchHHHhhc---CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCC
Q 014216 25 LYGSSSPVVQLT-PNNFKSKVLN---ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGI 100 (428)
Q Consensus 25 ~~~~~~~~~~l~-~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v 100 (428)
.......+..++ .++|...+.. ++++++|+||++||++|+.+.|.|.++++.++ .+.|+.||++++++++++|++
T Consensus 9 ~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v 87 (130)
T 1wmj_A 9 MAAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKEVAEKYNV 87 (130)
T ss_dssp CCSSCSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGGGHHHHTC
T ss_pred ccccCcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHHHHHHcCC
Confidence 344556777885 4778855543 58899999999999999999999999999987 589999999999999999999
Q ss_pred ccccEEEEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 101 RGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 101 ~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
.++|+++++++|+.+.++.| .+.+.+.+++.+.+
T Consensus 88 ~~~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 88 EAMPTFLFIKDGAEADKVVG-ARKDDLQNTIVKHV 121 (130)
T ss_dssp CSSCCCCBCTTTTCCBCCCT-TCTTTHHHHHHHHT
T ss_pred CccceEEEEeCCeEEEEEeC-CCHHHHHHHHHHHH
Confidence 99999999999988888888 58889999998775
No 149
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.62 E-value=9.1e-14 Score=123.72 Aligned_cols=206 Identities=16% Similarity=0.206 Sum_probs=160.6
Q ss_pred CcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEe
Q 014216 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV 110 (428)
Q Consensus 31 ~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~ 110 (428)
++..|++.+....+++.++.++|.|+++| |....+.|.++|..+.+.+.|+.+. +..++++|++.+ |++++|+
T Consensus 7 ~v~~l~s~~~~~~~l~~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~~~F~~~~---~~~v~~~~~~~~-p~i~~fk 79 (252)
T 2h8l_A 7 ASVPLRTEEEFKKFISDKDASIVGFFDDS---FSEAHSEFLKAASNLRDNYRFAHTN---VESLVNEYDDNG-EGIILFR 79 (252)
T ss_dssp CEEECCSHHHHHHHHTSSSCEEEEEESCT---TSHHHHHHHHHHHHTTTTSCEEEEC---CHHHHHHHCSSS-EEEEEEC
T ss_pred CceeecCHHHHHHHhhcCCeEEEEEECCC---CChHHHHHHHHHHhcccCcEEEEEC---hHHHHHHhCCCC-CcEEEEc
Confidence 46778654444366777889999999988 4556789999999998888898774 577999999997 9999998
Q ss_pred CC-------CCCccc-cCCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhhcCCeEE
Q 014216 111 PG-------KPPVDY-QGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLWI 182 (428)
Q Consensus 111 ~g-------~~~~~~-~g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~ 182 (428)
++ .....| .|..+.+.|.+|+... ..+.|.++|.++..... ..+.+
T Consensus 80 ~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~-----------------------~~Plv~e~t~~n~~~~~---~~~~~ 133 (252)
T 2h8l_A 80 PSHLTNKFEDKTVAYTEQKMTSGKIKKFIQEN-----------------------IFGICPHMTEDNKDLIQ---GKDLL 133 (252)
T ss_dssp CGGGCCTTSCSEEECCCSSCCHHHHHHHHHHH-----------------------SSCSSCEECTTTHHHHS---SSSEE
T ss_pred chhhcccccccccccCCCCcCHHHHHHHHHhc-----------------------ccCCeeecccccHhhhc---CCCeE
Confidence 53 234678 8989999999999988 57899999999988752 33455
Q ss_pred EEEECC-CCh--h-HhhHHHHHHHHHHHhcCC---eEEEEEeCCCchhHhhhcCC----CcCcEEEEEcCCCCCcccccC
Q 014216 183 VEFFAP-WCG--H-CKKLAPEWKKAANNLKGK---VKLGHVDCDSEKSLMSKFNV----QGFPTILVFGADKDSPIPYEG 251 (428)
Q Consensus 183 v~f~~~-~c~--~-c~~~~~~~~~~a~~~~~~---~~f~~v~~~~~~~~~~~~~v----~~~P~i~~~~~~~~~~~~y~g 251 (428)
+.|+.. ... . .......+.++|+.++++ +.|+.+|++....+++.||+ ..+|+++++... ...+.+.+
T Consensus 134 v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~-~~ky~~~~ 212 (252)
T 2h8l_A 134 IAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAK-GEKFVMQE 212 (252)
T ss_dssp EEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTT-SCEEECCS
T ss_pred EEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCc-CcEecCCc
Confidence 556543 211 1 124778899999999877 99999999888889999999 358999999643 34555677
Q ss_pred CCCHHH--HHHHHHHHHhhcC
Q 014216 252 ARTAGA--IESFALEQLETNV 270 (428)
Q Consensus 252 ~~~~~~--i~~fi~~~~~~~~ 270 (428)
.++.+. |..|+.+.+....
T Consensus 213 ~~t~~~~~i~~F~~~~~~Gkl 233 (252)
T 2h8l_A 213 EFSRDGKALERFLQDYFDGNL 233 (252)
T ss_dssp CCCTTSHHHHHHHHHHHHTCS
T ss_pred ccCcchHHHHHHHHHHHCCCc
Confidence 888888 9999999886554
No 150
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.61 E-value=3.9e-15 Score=116.78 Aligned_cols=107 Identities=25% Similarity=0.491 Sum_probs=94.9
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEE
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~ 237 (428)
....+..++..++...+...+++++|.||++||++|+.+.+.|.++++.+.+.+.|+.||++.+.+++++|++.++|+++
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 89 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLI 89 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEEE
Confidence 46678999999999887777889999999999999999999999999999888999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 238 VFGADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
+|+ +++....+.|..+.+.+.+++.+.
T Consensus 90 ~~~-~g~~~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 90 LFK-DGQPVKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp EEE-TTEEEEEEESCCCHHHHHHHTCSC
T ss_pred EEE-CCEEEEEecCCCCHHHHHHHHHHH
Confidence 997 444566788999999999987655
No 151
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=4.6e-15 Score=117.33 Aligned_cols=105 Identities=29% Similarity=0.590 Sum_probs=92.9
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCCchhHhhhcCCCcCcEE
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSEKSLMSKFNVQGFPTI 236 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~~~~~~~~~v~~~P~i 236 (428)
....+..++.+++.+.+ . ..++|.||++||++|+.+.+.|.++++.+.+ .+.|+.||++.+..++++|+|.++|++
T Consensus 5 ~~~~v~~l~~~~f~~~~-~--~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 5 SSGNVRVITDENWRELL-E--GDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTI 81 (126)
T ss_dssp CCCSEEECCTTTHHHHT-S--SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCCccEEecHHHHHHHh-C--CCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEE
Confidence 45679999999999765 3 2489999999999999999999999999986 799999999999999999999999999
Q ss_pred EEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 237 LVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 237 ~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
++|++ ++ ...|.|..+.+.|.+|+.+.+.
T Consensus 82 ~~~~~-G~-~~~~~G~~~~~~l~~~l~~~~~ 110 (126)
T 1x5e_A 82 YHCKD-GE-FRRYQGPRTKKDFINFISDKEW 110 (126)
T ss_dssp EEEET-TE-EEECCSCCCHHHHHHHHHTCGG
T ss_pred EEEeC-Ce-EEEeecCCCHHHHHHHHHHHhh
Confidence 99954 33 6789999999999999988764
No 152
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.61 E-value=5.4e-15 Score=129.06 Aligned_cols=111 Identities=30% Similarity=0.598 Sum_probs=100.7
Q ss_pred CCCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEE
Q 014216 157 SDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTI 236 (428)
Q Consensus 157 ~~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i 236 (428)
.....+..++.++|.+.+.+.+++++|.||++||++|+.+.+.|.++++.+.+++.|+.||++.+..++++|+|.++|++
T Consensus 9 ~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~ 88 (222)
T 3dxb_A 9 PMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTL 88 (222)
T ss_dssp CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSEE
T ss_pred CCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCEE
Confidence 35677899999999998778889999999999999999999999999999998899999999999999999999999999
Q ss_pred EEEcCCCCCcccccCCCCHHHHHHHHHHHHhh
Q 014216 237 LVFGADKDSPIPYEGARTAGAIESFALEQLET 268 (428)
Q Consensus 237 ~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (428)
++|++ ++....+.|..+.+.+.+|+.+.+..
T Consensus 89 ~~~~~-G~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (222)
T 3dxb_A 89 LLFKN-GEVAATKVGALSKGQLKEFLDANLAG 119 (222)
T ss_dssp EEEET-TEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred EEEEC-CeEEEEeccccChHHHHHHHHhhccc
Confidence 99974 44566889999999999999988643
No 153
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.60 E-value=1.4e-15 Score=121.59 Aligned_cols=90 Identities=26% Similarity=0.428 Sum_probs=81.4
Q ss_pred hcCCCeEEEEEECCCChhhhhhhHHHH--HHHHHhcCceEEEEEcC---cccHhHHHHcCC---ccccEEEEE-eCCCCC
Q 014216 45 LNANGVVLVEFYAPWCGHCQALTPIWE--KAATVLKGVATVAALDA---NEHQSLAQEYGI---RGFPTIKVF-VPGKPP 115 (428)
Q Consensus 45 ~~~~~~~lv~f~~~~C~~C~~~~~~~~--~~~~~~~~~v~~~~vd~---~~~~~l~~~~~v---~~~P~~~~~-~~g~~~ 115 (428)
..++++++|+||++||++|+.+.|.|. +++..+++.+.++.||+ +++.+++++|+| .++|+++++ .+|+.+
T Consensus 26 ~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~ 105 (133)
T 3fk8_A 26 KRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVR 105 (133)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEE
T ss_pred HhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEE
Confidence 356899999999999999999999999 99999877899999999 899999999999 999999999 788877
Q ss_pred ccccC-------CCCcchHHHHHHHH
Q 014216 116 VDYQG-------ARDVKPIAEFALQQ 134 (428)
Q Consensus 116 ~~~~g-------~~~~~~l~~~i~~~ 134 (428)
.++.| ..+.+.+.+|+.+.
T Consensus 106 ~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 106 YTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp EECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EEecCCcccccccCCHHHHHHHHHHh
Confidence 78888 67888888888765
No 154
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.60 E-value=6.5e-15 Score=128.57 Aligned_cols=100 Identities=24% Similarity=0.378 Sum_probs=90.3
Q ss_pred CCcEEeCccchHHHhhcCCCeEEEEEEC--CCChhhhhhhHHHHHHHHHhc--CceEEEEEc-----CcccHhHHHHcCC
Q 014216 30 SPVVQLTPNNFKSKVLNANGVVLVEFYA--PWCGHCQALTPIWEKAATVLK--GVATVAALD-----ANEHQSLAQEYGI 100 (428)
Q Consensus 30 ~~~~~l~~~~~~~~~~~~~~~~lv~f~~--~~C~~C~~~~~~~~~~~~~~~--~~v~~~~vd-----~~~~~~l~~~~~v 100 (428)
..+..+++.+|+. ++.++++++|.||+ |||+ +.|.|++++..+. +.+.|+.|| |+.++++|++|+|
T Consensus 5 ~~v~~Lt~~nF~~-~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 5 KGALPLDTVTFYK-VIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp TTCEECCTTHHHH-HGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CCceECCHHHHHH-HHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 5688999999995 66778999999999 9999 9999999999986 369999999 5558999999999
Q ss_pred c--cccEEEEEeCCC--CCccccCCCCcchHHHHHHHH
Q 014216 101 R--GFPTIKVFVPGK--PPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 101 ~--~~P~~~~~~~g~--~~~~~~g~~~~~~l~~~i~~~ 134 (428)
+ ++||+++|++|+ .+.+|.|.++.+.|..|+.+.
T Consensus 80 ~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 80 DKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp CGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred CCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHh
Confidence 9 999999999997 478999999999999999876
No 155
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.60 E-value=4.6e-15 Score=118.64 Aligned_cols=102 Identities=17% Similarity=0.388 Sum_probs=85.2
Q ss_pred cEEeC-ccchHHHhhc-CCCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCceEEEEEcC----cccHhHHHHcCCcc
Q 014216 32 VVQLT-PNNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDA----NEHQSLAQEYGIRG 102 (428)
Q Consensus 32 ~~~l~-~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~v~~~~vd~----~~~~~l~~~~~v~~ 102 (428)
+..++ .+++...+.+ ++++++|+||++||++|+++.+.+ .++++.+++ +.++.||+ +.+..++++|+|.+
T Consensus 13 f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~v~~ 91 (134)
T 2fwh_A 13 FTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLNVLG 91 (134)
T ss_dssp CEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTTCCS
T ss_pred cEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcCCCC
Confidence 33344 3556543432 388999999999999999999999 899998876 89999999 67789999999999
Q ss_pred ccEEEEE-eCCCCC--ccccCCCCcchHHHHHHHH
Q 014216 103 FPTIKVF-VPGKPP--VDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 103 ~P~~~~~-~~g~~~--~~~~g~~~~~~l~~~i~~~ 134 (428)
+|+++++ .+|+.+ .++.|..+.+.|.+++.+.
T Consensus 92 ~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 92 LPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp SSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred CCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 9999999 778766 6899999999999999765
No 156
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.60 E-value=1.1e-15 Score=111.71 Aligned_cols=82 Identities=28% Similarity=0.468 Sum_probs=75.4
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEeCCCCCccccCCCCcchHH
Q 014216 49 GVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIA 128 (428)
Q Consensus 49 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~ 128 (428)
.+.++.||++||++|+++.|.+.++++.+++++.++.+|++++++++++||+.++|++++ +|+. ++.|..+.+.+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~ 78 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV--EFIGAPTKEALV 78 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE--ECCSSSSSHHHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE--eeecCCCHHHHH
Confidence 478999999999999999999999999999889999999999999999999999999888 7764 788999999999
Q ss_pred HHHHHH
Q 014216 129 EFALQQ 134 (428)
Q Consensus 129 ~~i~~~ 134 (428)
+++.+.
T Consensus 79 ~~l~~~ 84 (85)
T 1fo5_A 79 EAIKKR 84 (85)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998764
No 157
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.60 E-value=1.2e-14 Score=114.64 Aligned_cols=104 Identities=23% Similarity=0.409 Sum_probs=91.4
Q ss_pred CCcEEeCc-cchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEE
Q 014216 160 NESIELNS-SNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILV 238 (428)
Q Consensus 160 ~~v~~l~~-~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~ 238 (428)
..+..+++ +++.+.+ ..+++++|.||++||++|+.+.+.|.++++.+. .+.|+.||++.+.+++++|++.++|++++
T Consensus 19 ~mv~~l~~~~~f~~~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i 96 (125)
T 1r26_A 19 PSVVDVYSVEQFRNIM-SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNSEIVSKCRVLQLPTFII 96 (125)
T ss_dssp SCCEEECCHHHHHHHH-HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEECCCHHHHHHHH-ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHcCCCcccEEEE
Confidence 34889999 8888876 778899999999999999999999999999985 69999999999999999999999999999
Q ss_pred EcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 239 FGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 239 ~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
|++ +.....+.| .+.+.|.+++.+.+.
T Consensus 97 ~~~-G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 97 ARS-GKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EET-TEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred EeC-CeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 964 444556788 688999999988764
No 158
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.60 E-value=1e-15 Score=120.46 Aligned_cols=105 Identities=30% Similarity=0.632 Sum_probs=88.0
Q ss_pred CCcEEeCccchHHHHhhcCCeEEEEEECCCCh--------------hHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHh
Q 014216 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCG--------------HCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLM 225 (428)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~--------------~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~ 225 (428)
..+..++.+++.+.+...+++++|.||++||+ +|+.+.+.|.++++.+.+++.|+.||++.+++++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~ 82 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 82 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTG
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHH
Confidence 35788999999987777888999999999999 9999999999999999888999999999999999
Q ss_pred hhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 226 SKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 226 ~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
++|+|+++|++++|+ +++...++.|..+.+++.+|+.+.
T Consensus 83 ~~~~v~~~Pt~~~~~-~G~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 83 PKYGIRGIPTLLLFK-NGEVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp GGGTCCBSSEEEEEE-SSSEEEEEESCCCHHHHHHHHTTT
T ss_pred HHcCCCccCEEEEEE-CCEEEEEEeCCCCHHHHHHHHHHH
Confidence 999999999999995 455566789999999999998654
No 159
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.59 E-value=8.9e-15 Score=111.74 Aligned_cols=102 Identities=23% Similarity=0.492 Sum_probs=88.5
Q ss_pred cEEeCc-cchHHHHhh-cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEE
Q 014216 162 SIELNS-SNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (428)
Q Consensus 162 v~~l~~-~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~ 239 (428)
+.++++ +++.+.+.+ .+++++|.||++||++|+.+.+.+.++++.+++.+.|+.+|++.+..++++|++.++|+++++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEE
Confidence 456777 778877754 678999999999999999999999999999988899999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 240 GADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
++ ++....+.| .+.+.+.+++.+.
T Consensus 82 ~~-G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 82 KN-GVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp ET-TEEEEEEES-CCHHHHHHHHHHT
T ss_pred cC-CcEEEEEcC-CCHHHHHHHHHHh
Confidence 64 444567788 7889999998764
No 160
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.59 E-value=1.5e-14 Score=110.76 Aligned_cols=102 Identities=23% Similarity=0.339 Sum_probs=85.4
Q ss_pred cEEe-CccchHHHHhh-cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEE
Q 014216 162 SIEL-NSSNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (428)
Q Consensus 162 v~~l-~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~ 239 (428)
+..+ +.+++.+.+.. .+++++|.||++||++|+.+.+.+.++++.+ +.+.|+.+|++.+++++++|++.++|++++|
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQGTAATNNISATPTFQFF 81 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHHHHHHTTCCSSSEEEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECccCHHHHHhcCCCcccEEEEE
Confidence 5566 45777777653 6789999999999999999999999999999 4699999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 240 GADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
++ ++...++.|. ..++|.+|+.+++
T Consensus 82 ~~-G~~~~~~~G~-~~~~l~~~l~~~l 106 (107)
T 1gh2_A 82 RN-KVRIDQYQGA-DAVGLEEKIKQHL 106 (107)
T ss_dssp ET-TEEEEEEESS-CHHHHHHHHHHHH
T ss_pred EC-CeEEEEEeCC-CHHHHHHHHHHhc
Confidence 64 4445567784 5566999987764
No 161
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.59 E-value=1e-14 Score=114.53 Aligned_cols=106 Identities=22% Similarity=0.377 Sum_probs=92.2
Q ss_pred CCCCcEEeCccchHHHHhh---cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCc
Q 014216 158 DSNESIELNSSNFDELVLK---SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFP 234 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~---~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P 234 (428)
..+.+..++.+++...+.. .+++++|.||++||++|+.+.+.|.++++.+.+ +.|+.||++.+.+++++|++.++|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~P 89 (122)
T 2vlu_A 11 AAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKPIAEQFSVEAMP 89 (122)
T ss_dssp -CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHcCCCccc
Confidence 3455667788899888765 578999999999999999999999999999987 999999999999999999999999
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 235 TILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
++++|+ +++....+.|.. .+.|.+|+.+.+
T Consensus 90 t~~~~~-~G~~~~~~~G~~-~~~l~~~l~~~l 119 (122)
T 2vlu_A 90 TFLFMK-EGDVKDRVVGAI-KEELTAKVGLHA 119 (122)
T ss_dssp EEEEEE-TTEEEEEEESSC-HHHHHHHHHHHH
T ss_pred EEEEEe-CCEEEEEEeCcC-HHHHHHHHHHHh
Confidence 999996 444456788888 999999998876
No 162
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.59 E-value=2.1e-14 Score=110.71 Aligned_cols=106 Identities=21% Similarity=0.383 Sum_probs=90.3
Q ss_pred CCCCcEEeCccchHHHHhh-cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC-CchhHhhhcCCCcCcE
Q 014216 158 DSNESIELNSSNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD-SEKSLMSKFNVQGFPT 235 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~-~~~~~~~~~~v~~~P~ 235 (428)
....+..++.+++.+.+.. .+++++|.||++||++|+.+.+.+.++++.+.+ +.|+.||++ .+.+++++|+++++|+
T Consensus 3 ~~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~~~~~~~~v~~~Pt 81 (111)
T 2pu9_C 3 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVPT 81 (111)
T ss_dssp CTTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSBSSE
T ss_pred CcCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcchHHHHHHcCCCeeeE
Confidence 3567899999999998754 577999999999999999999999999999874 999999998 6889999999999999
Q ss_pred EEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 236 ILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 236 i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+++++++ .....+.|. +.+.|.+++.+.+
T Consensus 82 ~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 82 FKILKEN-SVVGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp EEEESSS-SEEEEEESS-CHHHHHHHHHHHH
T ss_pred EEEEeCC-cEEEEEcCC-CHHHHHHHHHHhh
Confidence 8888644 445567776 5889999987653
No 163
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.59 E-value=1.5e-15 Score=111.08 Aligned_cols=81 Identities=22% Similarity=0.346 Sum_probs=74.5
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEeCCCCCccccCCCCcchHHH
Q 014216 50 VVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAE 129 (428)
Q Consensus 50 ~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~ 129 (428)
..++.||++||++|+++.|.+.++++.+++++.++.+|++++++++++||+.++|++++ +|+. ++.|..+.+.+.+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~~ 78 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV--RFVGAPSREELFE 78 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE--EEECSSCCHHHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE--EEccCCCHHHHHH
Confidence 46899999999999999999999999999889999999999999999999999999887 7764 7889889999999
Q ss_pred HHHHH
Q 014216 130 FALQQ 134 (428)
Q Consensus 130 ~i~~~ 134 (428)
++.+.
T Consensus 79 ~l~~~ 83 (85)
T 1nho_A 79 AINDE 83 (85)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99865
No 164
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.58 E-value=1.8e-14 Score=110.77 Aligned_cols=101 Identities=27% Similarity=0.472 Sum_probs=87.0
Q ss_pred CcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEc
Q 014216 161 ESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFG 240 (428)
Q Consensus 161 ~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~ 240 (428)
.....+.+++.+.+ ..+++++|.||++||++|+.+.+.+.++++.+.+ +.|+.||++.+..++++|+|+++|++++|+
T Consensus 8 ~~~~~~~~~f~~~~-~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 85 (109)
T 3f3q_A 8 VTQFKTASEFDSAI-AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELGDVAQKNEVSAMPTLLLFK 85 (109)
T ss_dssp CEECCSHHHHHHHT-TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred ccCCCCHHHHHHHH-hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCCccCEEEEEE
Confidence 34455667777765 6688999999999999999999999999999965 999999999999999999999999999998
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHH
Q 014216 241 ADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 241 ~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
+++...++.|. +.+.|.+++.++
T Consensus 86 -~G~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 86 -NGKEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp -TTEEEEEEESS-CHHHHHHHHHHH
T ss_pred -CCEEEEEEeCC-CHHHHHHHHHhh
Confidence 45556677787 779999998765
No 165
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.58 E-value=1.4e-15 Score=131.55 Aligned_cols=104 Identities=16% Similarity=0.265 Sum_probs=89.7
Q ss_pred CCCCcEEe-CccchHHHhhcCC--CeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCcccc
Q 014216 28 SSSPVVQL-TPNNFKSKVLNAN--GVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFP 104 (428)
Q Consensus 28 ~~~~~~~l-~~~~~~~~~~~~~--~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 104 (428)
....+..+ +.++|...+...+ ++++|+||++||++|+.+.|.|.+++..+. .+.|+.||++ ++.++.+|+|.++|
T Consensus 97 ~~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~~~l~~~~~i~~~P 174 (217)
T 2trc_P 97 RYGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-NTGAGDRFSSDVLP 174 (217)
T ss_dssp CCCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-HHTCSTTSCGGGCS
T ss_pred CCCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-cHHHHHHCCCCCCC
Confidence 34568888 8889996665443 899999999999999999999999999986 5899999999 88899999999999
Q ss_pred EEEEEeCCCCCccccCCCCc-------chHHHHHHH
Q 014216 105 TIKVFVPGKPPVDYQGARDV-------KPIAEFALQ 133 (428)
Q Consensus 105 ~~~~~~~g~~~~~~~g~~~~-------~~l~~~i~~ 133 (428)
|+++|++|+.+.++.|..+. +.|..||.+
T Consensus 175 Tl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~ 210 (217)
T 2trc_P 175 TLLVYKGGELISNFISVAEQFAEDFFAADVESFLNE 210 (217)
T ss_dssp EEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHT
T ss_pred EEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHH
Confidence 99999999888888887775 777777764
No 166
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.58 E-value=3.6e-15 Score=117.37 Aligned_cols=100 Identities=11% Similarity=0.221 Sum_probs=83.4
Q ss_pred cEEeCccchHHHhhc-CCCeEEEEEECC-------CChhhhhhhHHHHHHHHHhcCceEEEEEcC-------cccHhHHH
Q 014216 32 VVQLTPNNFKSKVLN-ANGVVLVEFYAP-------WCGHCQALTPIWEKAATVLKGVATVAALDA-------NEHQSLAQ 96 (428)
Q Consensus 32 ~~~l~~~~~~~~~~~-~~~~~lv~f~~~-------~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~-------~~~~~l~~ 96 (428)
+...+.++|...+.. ++++++|+||++ ||++|+.+.|.+.++++.+++.+.|+.||+ +.+..+++
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~ 86 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRK 86 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHH
Confidence 456677888865544 489999999999 999999999999999999987899999999 78889999
Q ss_pred HcCCccccEEEEEeCCCCCccccCCCCcchHHHHHH
Q 014216 97 EYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFAL 132 (428)
Q Consensus 97 ~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i~ 132 (428)
+|+|.++|++++|.++..+..+.| .+.+.+.+|+.
T Consensus 87 ~~~i~~~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~ 121 (123)
T 1wou_A 87 NLKVTAVPTLLKYGTPQKLVESEC-LQANLVEMLFS 121 (123)
T ss_dssp HHCCCSSSEEEETTSSCEEEGGGG-GCHHHHHHHHH
T ss_pred HCCCCeeCEEEEEcCCceEecccc-CCHHHHHHHHh
Confidence 999999999999988655444444 45666777764
No 167
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.58 E-value=1.4e-14 Score=110.48 Aligned_cols=100 Identities=25% Similarity=0.448 Sum_probs=85.0
Q ss_pred EEe-CccchHHHHhh-cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEc
Q 014216 163 IEL-NSSNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFG 240 (428)
Q Consensus 163 ~~l-~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~ 240 (428)
..+ +.+++.+.+.. .+++++|.||++||++|+.+.+.+.++++.+.+ +.|+.+|++.+++++++|++.++|++++|+
T Consensus 3 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 81 (105)
T 3m9j_A 3 KQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEVKSMPTFQFFK 81 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHHHHHHTTCCBSSEEEEEE
T ss_pred EEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHHHHHHcCCCcCcEEEEEE
Confidence 445 34556665533 578999999999999999999999999999976 999999999999999999999999999996
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHH
Q 014216 241 ADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 241 ~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
+ ++....+.|. +.+.|.+++.+.
T Consensus 82 ~-g~~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 82 K-GQKVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp T-TEEEEEEESS-CHHHHHHHHHHH
T ss_pred C-CeEEEEEeCC-CHHHHHHHHHHh
Confidence 4 4456678888 999999998765
No 168
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.58 E-value=1.6e-14 Score=111.51 Aligned_cols=104 Identities=24% Similarity=0.464 Sum_probs=89.9
Q ss_pred CcEEe-CccchHHHHhh-c--CCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEE
Q 014216 161 ESIEL-NSSNFDELVLK-S--KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTI 236 (428)
Q Consensus 161 ~v~~l-~~~~~~~~~~~-~--~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i 236 (428)
.+..+ +.+++.+.+.. . +++++|.||++||++|+.+.+.|.++++.+.+.+.|+.+|++.+.+++++|++.++|++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 82 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTF 82 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEE
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEE
Confidence 46777 45778777643 2 78999999999999999999999999999988899999999999999999999999999
Q ss_pred EEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 237 LVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 237 ~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+++++ +.....+.|. +.+.|.+++.+.+
T Consensus 83 ~~~~~-G~~~~~~~G~-~~~~l~~~l~~~l 110 (112)
T 1ep7_A 83 HVYKD-GVKADDLVGA-SQDKLKALVAKHA 110 (112)
T ss_dssp EEEET-TEEEEEEESC-CHHHHHHHHHHHH
T ss_pred EEEEC-CeEEEEEcCC-CHHHHHHHHHHHh
Confidence 99964 4445677888 8999999998775
No 169
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.58 E-value=3.9e-15 Score=116.52 Aligned_cols=107 Identities=39% Similarity=0.766 Sum_probs=93.9
Q ss_pred CCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcC---CeEEEEEeCCCchhHhhhcCCCcCcE
Q 014216 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG---KVKLGHVDCDSEKSLMSKFNVQGFPT 235 (428)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~---~~~f~~v~~~~~~~~~~~~~v~~~P~ 235 (428)
...+..++.+++.+.+ ..+++++|.||++||++|+.+.+.|.++++.+.+ .+.|+.+|++.+..++++|++.++|+
T Consensus 6 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 84 (120)
T 1mek_A 6 EDHVLVLRKSNFAEAL-AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPT 84 (120)
T ss_dssp ETTEEECCTTTHHHHH-HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSE
T ss_pred CCCcEEechhhHHHHH-ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccE
Confidence 4568999999999876 5678999999999999999999999999999873 69999999999999999999999999
Q ss_pred EEEEcCCCC-CcccccCCCCHHHHHHHHHHHH
Q 014216 236 ILVFGADKD-SPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 236 i~~~~~~~~-~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+++|+++.. ....|.|..+.+.|.+|+.+++
T Consensus 85 ~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 85 IKFFRNGDTASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp EEEEESSCSSSCEECCCCSSHHHHHHHHHTTS
T ss_pred EEEEeCCCcCCcccccCccCHHHHHHHHHhcc
Confidence 999965432 1278899999999999998764
No 170
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.58 E-value=6.8e-15 Score=117.39 Aligned_cols=101 Identities=14% Similarity=0.252 Sum_probs=91.0
Q ss_pred cEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCcc--ccEEEEE
Q 014216 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRG--FPTIKVF 109 (428)
Q Consensus 32 ~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~--~P~~~~~ 109 (428)
+.+++.++|. .++..+.+++|.||++ |++|+.+.|.++++++++++++.|+.+|.+++++++++|||++ +|+++++
T Consensus 8 v~~~t~~~f~-~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~ 85 (133)
T 2djk_A 8 IGEIGPETYS-DYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQ 85 (133)
T ss_dssp SEECCHHHHH-HHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEE
T ss_pred eeccChHHHH-HHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEEEE
Confidence 6789999998 5567788999999999 8999999999999999999999999999999999999999999 9999999
Q ss_pred eC--CCCCcccc--CCCCcchHHHHHHHHH
Q 014216 110 VP--GKPPVDYQ--GARDVKPIAEFALQQI 135 (428)
Q Consensus 110 ~~--g~~~~~~~--g~~~~~~l~~~i~~~l 135 (428)
.+ |+. .+.. |..+.+.|.+|+.+.+
T Consensus 86 ~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 86 EVAKNQK-FPFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp CTTTCCB-CCCCSSSCCCHHHHHHHHHHHH
T ss_pred ecCcCcc-cCCCCccccCHHHHHHHHHHHH
Confidence 86 554 4554 9999999999998776
No 171
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.57 E-value=2.3e-15 Score=114.89 Aligned_cols=96 Identities=13% Similarity=0.150 Sum_probs=74.1
Q ss_pred ccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCc
Q 014216 167 SSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSP 246 (428)
Q Consensus 167 ~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~ 246 (428)
.+++.+.+ ..+++++|.||++||++|+.+.+.+.++++.+. .+.|+.||++.+++++++|+|+++|++++|+ +++..
T Consensus 8 ~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~-~G~~~ 84 (105)
T 4euy_A 8 IEELATYI-EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQEIAGRYAVFTGPTVLLFY-NGKEI 84 (105)
T ss_dssp --CCSSST-TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC---------CCCCEEEEEE-TTEEE
T ss_pred HHHHHHHH-hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCHHHHHhcCCCCCCEEEEEe-CCeEE
Confidence 34555554 668899999999999999999999999999984 7999999999999999999999999999997 44556
Q ss_pred ccccCCCCHHHHHHHHHHH
Q 014216 247 IPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 247 ~~y~g~~~~~~i~~fi~~~ 265 (428)
.++.|..+.+.|.+++.++
T Consensus 85 ~~~~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 85 LRESRFISLENLERTIQLF 103 (105)
T ss_dssp EEEESSCCHHHHHHHHHTT
T ss_pred EEEeCCcCHHHHHHHHHHh
Confidence 7778999999999998765
No 172
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.57 E-value=1e-14 Score=117.60 Aligned_cols=105 Identities=26% Similarity=0.513 Sum_probs=80.7
Q ss_pred CCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEE
Q 014216 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (428)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~ 239 (428)
..+..++.+++...+...+. ++|.||++||++|+.+.+.|.++++.+.+.+.|+.||++.+.+++++|++.++|++++|
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 111 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTLVLF 111 (140)
T ss_dssp ----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CccccCCHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCccCEEEEE
Confidence 56788999999988755555 99999999999999999999999999988899999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 240 GADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+ ++.....+.|..+.+.+.+|+.+.+
T Consensus 112 ~-~G~~~~~~~G~~~~~~l~~~i~~~l 137 (140)
T 1v98_A 112 R-RGAPVATWVGASPRRVLEERLRPYL 137 (140)
T ss_dssp E-TTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred e-CCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 6 4445567889999999999998876
No 173
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.57 E-value=9.3e-15 Score=115.54 Aligned_cols=95 Identities=16% Similarity=0.161 Sum_probs=85.2
Q ss_pred hcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEe--CCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCCC
Q 014216 176 KSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVD--CDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGAR 253 (428)
Q Consensus 176 ~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~--~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~ 253 (428)
..+++++|.||++||++|+.+.+.+.++++.+.+.+.|+.|| ++.+.+++++|++.++|++++|..++.....+.|..
T Consensus 24 ~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~ 103 (126)
T 2l57_A 24 KEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGLM 103 (126)
T ss_dssp CSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESCC
T ss_pred hCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecCCC
Confidence 457799999999999999999999999999998889999999 888999999999999999999986666666788999
Q ss_pred CHHHHHHHHHHHHhhcC
Q 014216 254 TAGAIESFALEQLETNV 270 (428)
Q Consensus 254 ~~~~i~~fi~~~~~~~~ 270 (428)
+.+.|.+++.+++....
T Consensus 104 ~~~~l~~~l~~~~~~~~ 120 (126)
T 2l57_A 104 RKNNIETILNSLGVKEG 120 (126)
T ss_dssp CHHHHHHHHHHHCCCCC
T ss_pred CHHHHHHHHHHHhcccc
Confidence 99999999998865443
No 174
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.57 E-value=7.9e-15 Score=113.68 Aligned_cols=104 Identities=21% Similarity=0.359 Sum_probs=87.5
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEE
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~ 237 (428)
..+.+..+++.+..+.+...+++++|.||++||++|+.+.+.+.++++.+.+ +.|+.||++.+.+++++|++.++|+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 88 (114)
T 2oe3_A 10 SYTSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPDIAKECEVTAMPTFV 88 (114)
T ss_dssp CGGGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSBSEEE
T ss_pred chhheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHCCCCcccEEE
Confidence 3455667777665555567788999999999999999999999999999977 999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHH
Q 014216 238 VFGADKDSPIPYEGARTAGAIESFALE 264 (428)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~ 264 (428)
++++ ++...++.|.. .+.|.+++.+
T Consensus 89 ~~~~-G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 89 LGKD-GQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEET-TEEEEEEESSC-HHHHHHHHHT
T ss_pred EEeC-CeEEEEEeCCC-HHHHHHHHHh
Confidence 9964 44456678887 8888888753
No 175
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.57 E-value=1.3e-14 Score=112.18 Aligned_cols=104 Identities=28% Similarity=0.519 Sum_probs=90.6
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEE
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~ 237 (428)
.++....++.+++.+.+ ..+++++|.||++||++|+.+.+.+.++++.+. .+.|+.||++.++.++++|++.++|+++
T Consensus 7 ~~~~~~~~~~~~f~~~~-~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~~ 84 (112)
T 1syr_A 7 HHMVKIVTSQAEFDSII-SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVSEVTEKENITSMPTFK 84 (112)
T ss_dssp --CCEEECSHHHHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred ceeEEEECCHHHHHHHH-ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCCHHHHHHcCCCcccEEE
Confidence 56778888999999987 578899999999999999999999999999987 5999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 238 VFGADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
++++ +.....+.|. +.+.|.+++.+.
T Consensus 85 ~~~~-G~~~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 85 VYKN-GSSVDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp EEET-TEEEEEEESC-CHHHHHHHHHTT
T ss_pred EEEC-CcEEEEEeCC-CHHHHHHHHHHh
Confidence 9974 4445677888 999999998654
No 176
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.57 E-value=6e-15 Score=123.48 Aligned_cols=106 Identities=13% Similarity=0.252 Sum_probs=84.9
Q ss_pred cEEeCccchHHHh---hcCCCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCceEEEEEcCcccHhH-----------
Q 014216 32 VVQLTPNNFKSKV---LNANGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDANEHQSL----------- 94 (428)
Q Consensus 32 ~~~l~~~~~~~~~---~~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~v~~~~vd~~~~~~l----------- 94 (428)
....+..+|+..+ ..++++++|.||++||++|+++.+.+ .++.+.+++.+.++.||++++.++
T Consensus 28 ~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~ 107 (172)
T 3f9u_A 28 EVHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGT 107 (172)
T ss_dssp CCCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTE
T ss_pred ccccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcch
Confidence 3445556676433 25689999999999999999985544 556665555789999999877655
Q ss_pred ---------------HHHcCCccccEEEEE-eCCCCCccccCCCC-cchHHHHHHHHHHH
Q 014216 95 ---------------AQEYGIRGFPTIKVF-VPGKPPVDYQGARD-VKPIAEFALQQIKA 137 (428)
Q Consensus 95 ---------------~~~~~v~~~P~~~~~-~~g~~~~~~~g~~~-~~~l~~~i~~~l~~ 137 (428)
+++|++.++|+++++ ++|+.+.++.|..+ .+.+.++|.+.+++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~~ 167 (172)
T 3f9u_A 108 ERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLEN 167 (172)
T ss_dssp EEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHHH
Confidence 789999999999999 77888888899998 99999999988754
No 177
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.56 E-value=2.3e-14 Score=110.73 Aligned_cols=104 Identities=19% Similarity=0.351 Sum_probs=85.2
Q ss_pred cEEeCc-cchHHHHh--hcCCeEEEEEECCCChhHhhHHHHHHHHHHHh-cCCeEEEEEeCCCchhHhhhcCCCcCcEEE
Q 014216 162 SIELNS-SNFDELVL--KSKDLWIVEFFAPWCGHCKKLAPEWKKAANNL-KGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (428)
Q Consensus 162 v~~l~~-~~~~~~~~--~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~-~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~ 237 (428)
+..+++ +++.+.+. ..+++++|.||++||++|+.+.+.+.++++.+ ...+.|+.+|++.+++++++|++.++|+++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 81 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFI 81 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEE
Confidence 577887 88887764 23779999999999999999999999999996 346999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 238 VFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
+|+ +++....+.|. ..++|.+++.+.+.
T Consensus 82 ~~~-~G~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 82 IIH-KGTILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp EEE-TTEEEEEECSC-CHHHHHHHHHHHHH
T ss_pred EEE-CCEEEEEecCC-CHHHHHHHHHHHHh
Confidence 996 44445567776 56679999887753
No 178
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.56 E-value=4.2e-15 Score=130.03 Aligned_cols=104 Identities=14% Similarity=0.214 Sum_probs=86.6
Q ss_pred CCCCcEEe-CccchHHHhhc--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCcccc
Q 014216 28 SSSPVVQL-TPNNFKSKVLN--ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFP 104 (428)
Q Consensus 28 ~~~~~~~l-~~~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 104 (428)
....+..+ +.++|...+.. +++++||+||++||++|+.+.|.|.+++..+.+ +.|+.||++. ..++.+|+|.++|
T Consensus 110 ~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~-~~l~~~~~I~~~P 187 (245)
T 1a0r_P 110 RYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN-TGAGDRFSSDVLP 187 (245)
T ss_dssp CCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH-HCCTTSSCTTTCS
T ss_pred CCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc-HHHHHHCCCCCCC
Confidence 34568888 68899966644 378999999999999999999999999999986 8999999987 7799999999999
Q ss_pred EEEEEeCCCCCccccCCCC-------cchHHHHHHH
Q 014216 105 TIKVFVPGKPPVDYQGARD-------VKPIAEFALQ 133 (428)
Q Consensus 105 ~~~~~~~g~~~~~~~g~~~-------~~~l~~~i~~ 133 (428)
|+++|++|+.+.++.|... .+.|..||.+
T Consensus 188 Tll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~ 223 (245)
T 1a0r_P 188 TLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNE 223 (245)
T ss_dssp EEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHT
T ss_pred EEEEEECCEEEEEEeCCcccccccccHHHHHHHHHH
Confidence 9999999987677777543 3456666654
No 179
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.56 E-value=4.3e-14 Score=111.26 Aligned_cols=106 Identities=28% Similarity=0.474 Sum_probs=89.9
Q ss_pred CCCCcEEe-CccchHHHHhh---cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcC
Q 014216 158 DSNESIEL-NSSNFDELVLK---SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGF 233 (428)
Q Consensus 158 ~~~~v~~l-~~~~~~~~~~~---~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~ 233 (428)
....+..+ +.+++.+.+.. .+++++|.||++||++|+.+.+.|.++++.+. .+.|+.||++.+.+++++|+|.++
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~ 92 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELKSVASDWAIQAM 92 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSHHHHHHTTCCSS
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHHcCCCcc
Confidence 45668888 55777777654 47899999999999999999999999999987 799999999999999999999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
|+++++++ +.....+.| .+.+.|.+++.+.+
T Consensus 93 Pt~~~~~~-G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 93 PTFMFLKE-GKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SEEEEEET-TEEEEEEES-CCHHHHHHHHHHHC
T ss_pred CEEEEEEC-CEEEEEEeC-CCHHHHHHHHHHhc
Confidence 99999964 444556777 58899999987753
No 180
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.56 E-value=3.3e-14 Score=108.15 Aligned_cols=100 Identities=23% Similarity=0.534 Sum_probs=85.6
Q ss_pred EEeCc-cchHHHHhh-cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEc
Q 014216 163 IELNS-SNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFG 240 (428)
Q Consensus 163 ~~l~~-~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~ 240 (428)
..+++ +++.+.+.. .+++++|.||++||++|+.+.+.+.++++.+. .+.|+.+|++.+++++++|++.++|++++++
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIK 80 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCHHHHHHcCCccccEEEEEe
Confidence 45666 777777643 57799999999999999999999999999987 7999999999999999999999999999997
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHH
Q 014216 241 ADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 241 ~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
+ +.....+.| .+.+.+.+|+.+.
T Consensus 81 ~-g~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 81 D-GKEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp T-TEEEEEEES-SCHHHHHHHHHHH
T ss_pred C-CcEEEEEeC-CCHHHHHHHHHhh
Confidence 4 444566778 6899999998765
No 181
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.55 E-value=2e-14 Score=112.05 Aligned_cols=101 Identities=27% Similarity=0.533 Sum_probs=87.6
Q ss_pred CcEEeCc-cchHHHHhh-cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEE
Q 014216 161 ESIELNS-SNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILV 238 (428)
Q Consensus 161 ~v~~l~~-~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~ 238 (428)
.+.++++ +++.+.+.+ .+++++|.||++||++|+.+.+.+.++++.+ .+.|+.||++.+++++++|++.++|++++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 91 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEETARKYNISAMPTFIA 91 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHHHHHHTTCCSSSEEEE
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHHHHHHcCCCccceEEE
Confidence 3788888 888887754 6779999999999999999999999999988 79999999999999999999999999999
Q ss_pred EcCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 239 FGADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 239 ~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
+++ +.....+.| .+.+.|.+++.++
T Consensus 92 ~~~-G~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 92 IKN-GEKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp EET-TEEEEEEES-SCHHHHHHHHHHH
T ss_pred EeC-CcEEEEEeC-CCHHHHHHHHHHh
Confidence 964 444566778 6888999998765
No 182
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.55 E-value=5.5e-15 Score=117.21 Aligned_cols=91 Identities=24% Similarity=0.401 Sum_probs=82.0
Q ss_pred HHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCC
Q 014216 173 LVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGA 252 (428)
Q Consensus 173 ~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~ 252 (428)
.....+++++|.||++||++|+.+.+.+.++++.+.+++.|+.||++.++.++++|+|.++|++++|+ +++...++.|.
T Consensus 37 ~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~-~G~~~~~~~G~ 115 (128)
T 3ul3_B 37 GVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLK-NKTMLARKDHF 115 (128)
T ss_dssp BTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEE-TTEEEEEESSC
T ss_pred HHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEE-CCEEEEEecCC
Confidence 33456889999999999999999999999999999988999999999999999999999999999996 45556778899
Q ss_pred CCHHHHHHHHHH
Q 014216 253 RTAGAIESFALE 264 (428)
Q Consensus 253 ~~~~~i~~fi~~ 264 (428)
.+.++|.+|+.+
T Consensus 116 ~~~~~l~~~l~~ 127 (128)
T 3ul3_B 116 VSSNDLIALIKK 127 (128)
T ss_dssp CCHHHHHHHHTT
T ss_pred CCHHHHHHHHHh
Confidence 999999999754
No 183
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=2e-15 Score=121.31 Aligned_cols=105 Identities=24% Similarity=0.490 Sum_probs=89.3
Q ss_pred CCCCcEEeCccchHHHHhhcCC-eEEEEEECCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCCchhHhhhcCCC----
Q 014216 158 DSNESIELNSSNFDELVLKSKD-LWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSEKSLMSKFNVQ---- 231 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~-~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~~~~~~~~~v~---- 231 (428)
.+..+..++.+++.+.+..... +++|.||++||++|+.+.+.|.++++.+.+ .+.|+.||++.+++++++|++.
T Consensus 5 ~~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~ 84 (137)
T 2dj0_A 5 SSGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPL 84 (137)
T ss_dssp CCSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSS
T ss_pred CCceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCC
Confidence 4567899999999998865544 899999999999999999999999999986 7999999999999999999999
Q ss_pred --cCcEEEEEcCCCCCcccccCCCCHHHHHHHHH
Q 014216 232 --GFPTILVFGADKDSPIPYEGARTAGAIESFAL 263 (428)
Q Consensus 232 --~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~ 263 (428)
++|++++|++ ++...++.|..+.+.|.+|+.
T Consensus 85 ~~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~ 117 (137)
T 2dj0_A 85 TKQLPTLILFQG-GKEAMRRPQIDKKGRAVSWTF 117 (137)
T ss_dssp SSCSSEEEEESS-SSEEEEESCBCSSSCBCCCCC
T ss_pred cCCCCEEEEEEC-CEEEEEecCcCchHHHHHHHh
Confidence 9999999964 444566778777666655543
No 184
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.54 E-value=2.2e-14 Score=130.50 Aligned_cols=108 Identities=21% Similarity=0.454 Sum_probs=96.1
Q ss_pred CCCCcEEeCccchHHHHhh-cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEE
Q 014216 158 DSNESIELNSSNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTI 236 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i 236 (428)
..+.++.++.++|.+.+.. .+++++|.||++||++|+.+.|.|.++++.+.+++.|+.||++.+++++++|+|+++|++
T Consensus 5 ~~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 5 SVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTV 84 (287)
T ss_dssp -CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEE
T ss_pred CCCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeE
Confidence 3567999999999997643 277999999999999999999999999999998999999999999999999999999999
Q ss_pred EEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 237 LVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 237 ~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
++|+. +.....+.|..+.+.+..|+...+
T Consensus 85 ~~~~~-G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 85 YLFQN-GQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEET-TEEEEEEESCCCHHHHHHHHHHHS
T ss_pred EEEEC-CEEEEEeeCCCCHHHHHHHHHHHc
Confidence 99964 445567899999999999998874
No 185
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.54 E-value=4.1e-15 Score=113.36 Aligned_cols=90 Identities=14% Similarity=0.108 Sum_probs=72.3
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhc--CceEEEEEcCccc--HhHHHHcCCccccEEEEEeCCCCCccccCCC
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLK--GVATVAALDANEH--QSLAQEYGIRGFPTIKVFVPGKPPVDYQGAR 122 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~--~~v~~~~vd~~~~--~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~ 122 (428)
+...+||+||++||++|+++.+.+........ ..+.+..||++.+ ..++.+++|.++||+++|.+|+.+.+..|..
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~~ 96 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGYP 96 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECCC
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCCC
Confidence 46789999999999999999875543222110 1256777888765 5799999999999999999999999999999
Q ss_pred CcchHHHHHHHHHH
Q 014216 123 DVKPIAEFALQQIK 136 (428)
Q Consensus 123 ~~~~l~~~i~~~l~ 136 (428)
..+.+..|+.+.+.
T Consensus 97 ~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 97 GEDFFWPMLARLIG 110 (116)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999988764
No 186
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.54 E-value=3.6e-14 Score=115.42 Aligned_cols=101 Identities=14% Similarity=0.189 Sum_probs=88.2
Q ss_pred CccchHHHHh-hcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCC
Q 014216 166 NSSNFDELVL-KSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKD 244 (428)
Q Consensus 166 ~~~~~~~~~~-~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~ 244 (428)
+.+++.+.+. ..+++++|.||++||++|+.+.+.+.++++.+.+.+.|+.||++.+++++++|+|.++|++++++++.
T Consensus 10 ~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~- 88 (149)
T 3gix_A 10 SKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQ- 88 (149)
T ss_dssp SHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTE-
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCe-
Confidence 5567777765 46789999999999999999999999999999888999999999999999999999999999887543
Q ss_pred Cc---------ccccC-CCCHHHHHHHHHHHHh
Q 014216 245 SP---------IPYEG-ARTAGAIESFALEQLE 267 (428)
Q Consensus 245 ~~---------~~y~g-~~~~~~i~~fi~~~~~ 267 (428)
.. ..+.| ..+.++|.+++...+.
T Consensus 89 ~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~ 121 (149)
T 3gix_A 89 HMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYR 121 (149)
T ss_dssp EEEEECSSSCCSCEESCCSSHHHHHHHHHHHHH
T ss_pred EEEeecCCCCCCeEeeecCCHHHHHHHHHHHHH
Confidence 34 57788 7889999999887754
No 187
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.53 E-value=9.6e-14 Score=109.32 Aligned_cols=105 Identities=22% Similarity=0.440 Sum_probs=89.8
Q ss_pred CCCCcEEeCccchHHHHhh-cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC-CchhHhhhcCCCcCcE
Q 014216 158 DSNESIELNSSNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD-SEKSLMSKFNVQGFPT 235 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~-~~~~~~~~~~v~~~P~ 235 (428)
....+..++.+++.+.+.. .+++++|.||++||++|+.+.+.+.++++.+. .+.|+.+|++ .+.+++++|+++++|+
T Consensus 16 ~~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~v~~~Pt 94 (124)
T 1faa_A 16 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCNQENKTLAKELGIRVVPT 94 (124)
T ss_dssp TTTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSTTHHHHHHHCCSSSSE
T ss_pred cCCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecCcchHHHHHHcCCCeeeE
Confidence 4567899999999988754 57799999999999999999999999999987 4999999998 6789999999999999
Q ss_pred EEEEcCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 236 ILVFGADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 236 i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
+++++++ +...++.|.. .+++.+++.+.
T Consensus 95 ~~~~~~G-~~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 95 FKILKEN-SVVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp EEEEETT-EEEEEEESSC-HHHHHHHHHHH
T ss_pred EEEEeCC-cEEEEEcCCC-HHHHHHHHHHh
Confidence 9998644 4455667765 88999988765
No 188
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.53 E-value=7.8e-14 Score=114.18 Aligned_cols=109 Identities=21% Similarity=0.416 Sum_probs=90.6
Q ss_pred CCCCcEEeCc-cchHHHHhhc-CCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcE
Q 014216 158 DSNESIELNS-SNFDELVLKS-KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (428)
Q Consensus 158 ~~~~v~~l~~-~~~~~~~~~~-~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~ 235 (428)
....+..++. +++...+... +++++|.||++||++|+.+.+.|.++++.+ ..+.|+.||++.+++++++|+|.++|+
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~~~~~l~~~~~v~~~Pt 88 (153)
T 2wz9_A 10 AVAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEGVPEVSEKYEISSVPT 88 (153)
T ss_dssp --CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred ccCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECCCCHHHHHHcCCCCCCE
Confidence 3566888875 7777766432 789999999999999999999999999998 469999999999999999999999999
Q ss_pred EEEEcCCCCCcccccCCCCHHHHHHHHHHHHhhc
Q 014216 236 ILVFGADKDSPIPYEGARTAGAIESFALEQLETN 269 (428)
Q Consensus 236 i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~ 269 (428)
+++|+ +++....+.| .+.++|.+++.+.+...
T Consensus 89 ~~~~~-~G~~~~~~~G-~~~~~l~~~i~~~l~~~ 120 (153)
T 2wz9_A 89 FLFFK-NSQKIDRLDG-AHAPELTKKVQRHASSG 120 (153)
T ss_dssp EEEEE-TTEEEEEEES-SCHHHHHHHHHHHSCTT
T ss_pred EEEEE-CCEEEEEEeC-CCHHHHHHHHHHHhccc
Confidence 99998 4544556667 57889999999887543
No 189
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.52 E-value=4.6e-14 Score=109.23 Aligned_cols=101 Identities=15% Similarity=0.216 Sum_probs=82.9
Q ss_pred CCcEEeCccchHHHHhhcCC--eEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEE
Q 014216 160 NESIELNSSNFDELVLKSKD--LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (428)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~--~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~ 237 (428)
..+.+++.++|.+.+.+.+. +++|.||++||++|+.+.+.++++|+.+. .+.|+.||++.. +++|+|+++|+++
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~---~~~~~v~~~PT~~ 78 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC---IQHYHDNCLPTIF 78 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT---STTCCGGGCSEEE
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh---HHHCCCCCCCEEE
Confidence 35788899999988866554 89999999999999999999999999986 599999998754 6899999999999
Q ss_pred EEcCCCCCcccccC-------CCCHHHHHHHHHHH
Q 014216 238 VFGADKDSPIPYEG-------ARTAGAIESFALEQ 265 (428)
Q Consensus 238 ~~~~~~~~~~~y~g-------~~~~~~i~~fi~~~ 265 (428)
+|+++. ...++.| ..+.++|..++.++
T Consensus 79 ~fk~G~-~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 79 VYKNGQ-IEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEETTE-EEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEECCE-EEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 998653 3444444 35778888887554
No 190
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.52 E-value=2.4e-12 Score=114.30 Aligned_cols=205 Identities=10% Similarity=0.126 Sum_probs=159.2
Q ss_pred CcEEeCc-cchHHHhhcC-CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEE
Q 014216 31 PVVQLTP-NNFKSKVLNA-NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (428)
Q Consensus 31 ~~~~l~~-~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~ 108 (428)
++..+++ ++++ .+++. ++.++|.|+.++| ....+.|.++|..+++.+.|+.+. +.++++++++.+ |++++
T Consensus 7 ~v~~l~s~~~~~-~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t~---~~~v~~~~~v~~-p~ivl 78 (250)
T 3ec3_A 7 PSKEILTLKQVQ-EFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHTF---STEIAKFLKVSL-GKLVL 78 (250)
T ss_dssp SSEECCCHHHHH-HHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEEC---CHHHHHHHTCCS-SEEEE
T ss_pred CceecCCHHHHH-HHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEEC---cHHHHHHcCCCC-CeEEE
Confidence 4667765 5666 55666 8899999999875 578889999999998888998864 578899999988 99999
Q ss_pred EeCC-------CCCcccc--CCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhhcCC
Q 014216 109 FVPG-------KPPVDYQ--GARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKD 179 (428)
Q Consensus 109 ~~~g-------~~~~~~~--g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~ 179 (428)
|+.+ .....|. |..+.+.|.+|+... ..+.+.+++.++....+ . ..
T Consensus 79 fk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~-----------------------~~Plv~e~t~~n~~~~~-~-~~ 133 (250)
T 3ec3_A 79 MQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKH-----------------------ALPLVGHRKTSNDAKRY-S-KR 133 (250)
T ss_dssp ECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHH-----------------------SSCTEEEECTTTHHHHS-C-SS
T ss_pred EecchhhccccccceeccCCCCCCHHHHHHHHHHc-----------------------CCCceeecCccchhhhh-c-cC
Confidence 9853 2346777 578899999999988 68899999999988765 3 55
Q ss_pred eEEEEEEC-CCC---h-hHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCc--C-cEEEEEcCCCCCccccc-
Q 014216 180 LWIVEFFA-PWC---G-HCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQG--F-PTILVFGADKDSPIPYE- 250 (428)
Q Consensus 180 ~~~v~f~~-~~c---~-~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~--~-P~i~~~~~~~~~~~~y~- 250 (428)
+.++.|+. +.+ . ....+...+.++|+.++ ++.|+.+|.......++.||+.. . |.++++.. ....+.+.
T Consensus 134 ~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~-~~~ky~~~~ 211 (250)
T 3ec3_A 134 PLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDE-SGKKFAMEP 211 (250)
T ss_dssp SEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECT-TSCEEECCC
T ss_pred ccEEEEEecccccccchhHHHHHHHHHHHHHhhc-ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcC-CCceecCCc
Confidence 66666664 322 2 23457889999999999 99999999988888889999874 3 57777753 33345555
Q ss_pred CCCCHHHHHHHHHHHHhhcC
Q 014216 251 GARTAGAIESFALEQLETNV 270 (428)
Q Consensus 251 g~~~~~~i~~fi~~~~~~~~ 270 (428)
+..+.+.|..|+.+.+....
T Consensus 212 ~~~t~~~i~~Fv~~~~~Gkl 231 (250)
T 3ec3_A 212 EEFDSDALREFVMAFKKGKL 231 (250)
T ss_dssp CSCCHHHHHHHHHHHHTTCC
T ss_pred ccCCHHHHHHHHHHHHCCCc
Confidence 67899999999999876543
No 191
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.52 E-value=6.2e-14 Score=113.03 Aligned_cols=103 Identities=15% Similarity=0.143 Sum_probs=84.4
Q ss_pred CccchHHHHhh-cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCC
Q 014216 166 NSSNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKD 244 (428)
Q Consensus 166 ~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~ 244 (428)
+.+++.+.+.. .+++++|.||++||++|+.+.+.+.++++.+.+.+.|+.||++.+++++++|+|+++|++++|+++..
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~ 89 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKH 89 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcE
Confidence 45667766654 57899999999999999999999999999998889999999999999999999999999999975432
Q ss_pred Cc--------ccccCCCC-HHHHHHHHHHHHhh
Q 014216 245 SP--------IPYEGART-AGAIESFALEQLET 268 (428)
Q Consensus 245 ~~--------~~y~g~~~-~~~i~~fi~~~~~~ 268 (428)
.. ....|... .+++.+++.+.+..
T Consensus 90 v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 90 IMIDLGTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp EEEECC------CCSCCSCHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 11 13455554 88898888877643
No 192
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.52 E-value=2.1e-14 Score=115.31 Aligned_cols=104 Identities=13% Similarity=0.169 Sum_probs=79.2
Q ss_pred CcEEeCccchHHHHhhcCCeEEEEEECCC--ChhHhhHHHHHHHHHHHhcCCeE--EEEEeCCCchhHhhhcCCCcCcEE
Q 014216 161 ESIELNSSNFDELVLKSKDLWIVEFFAPW--CGHCKKLAPEWKKAANNLKGKVK--LGHVDCDSEKSLMSKFNVQGFPTI 236 (428)
Q Consensus 161 ~v~~l~~~~~~~~~~~~~~~~~v~f~~~~--c~~c~~~~~~~~~~a~~~~~~~~--f~~v~~~~~~~~~~~~~v~~~P~i 236 (428)
.+..++.++|.+.+ ..+..++|.|+++| |++|+.+.|.|.++++.+ +++. |+.||++.+++++++|+|+++|++
T Consensus 18 ~~~~l~~~~f~~~i-~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~ 95 (142)
T 2es7_A 18 GWQPVEASTVDDWI-KRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNVRRFPAT 95 (142)
T ss_dssp TCEECCCC---------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTCCSSSEE
T ss_pred cCcccccccHHHHH-HhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCCCcCCeE
Confidence 68889999999886 45556788888877 999999999999999999 7888 999999999999999999999999
Q ss_pred EEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 237 LVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 237 ~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
++|+ +|+...++.|..+.+.|.+++.+.+.
T Consensus 96 ~~fk-~G~~v~~~~G~~~~~~l~~~i~~~l~ 125 (142)
T 2es7_A 96 LVFT-DGKLRGALSGIHPWAELLTLMRSIVD 125 (142)
T ss_dssp EEES-CC----CEESCCCHHHHHHHHHHHHC
T ss_pred EEEe-CCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 9996 45567788999999999999998874
No 193
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.27 E-value=9.7e-16 Score=121.99 Aligned_cols=94 Identities=22% Similarity=0.273 Sum_probs=82.8
Q ss_pred HhhcCCCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCceEEEEEcCc--ccHhHHHHcCCccccEEEEE--eCCCC-
Q 014216 43 KVLNANGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDAN--EHQSLAQEYGIRGFPTIKVF--VPGKP- 114 (428)
Q Consensus 43 ~~~~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~P~~~~~--~~g~~- 114 (428)
....++++++|+||++||++|+.+.|.+ .++++.+++++.++.||++ ++..++++|+|.++|++++| .+|+.
T Consensus 14 ~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~ 93 (130)
T 2lst_A 14 LAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWE 93 (130)
Confidence 3445688999999999999999999999 8999988888899999994 66899999999999999999 56877
Q ss_pred -CccccCCCCcchHHHHHHHHHH
Q 014216 115 -PVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 115 -~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
+.++.|..+.+.+.+++.+.+.
T Consensus 94 ~~~~~~G~~~~~~l~~~l~~~~~ 116 (130)
T 2lst_A 94 EVGRLFGSRPRAEFLKELRQVCV 116 (130)
Confidence 7889999999999999987753
No 194
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.51 E-value=1.6e-14 Score=115.59 Aligned_cols=104 Identities=19% Similarity=0.247 Sum_probs=90.8
Q ss_pred CCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeC---------CCchhHhhhcC
Q 014216 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC---------DSEKSLMSKFN 229 (428)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~---------~~~~~~~~~~~ 229 (428)
...+..++.+++.+.+. . +++|.||++||++|+.+.+.|.++++.+. +.|+.||+ +...+++++|+
T Consensus 15 ~~~v~~l~~~~~~~~~~-~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~ 89 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQ-G--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAG 89 (135)
T ss_dssp TTEEEECCHHHHHHHHT-S--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHT
T ss_pred cCceeecCHHHHHHHhC-C--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcC
Confidence 45688899999998873 3 99999999999999999999999999987 99999999 77889999999
Q ss_pred CCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhh
Q 014216 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLET 268 (428)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (428)
|.++|++++|+ +++...++.|..+.+.+..++.+.+..
T Consensus 90 v~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 90 VEGTPTLVFYK-EGRIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp CCSSSEEEEEE-TTEEEEEEESCCCHHHHHHHHHHHC--
T ss_pred CceeCeEEEEc-CCEEEEEEeCCCCHHHHHHHHHHHhCC
Confidence 99999999998 455567889999999999999888643
No 195
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.51 E-value=6.2e-14 Score=109.32 Aligned_cols=105 Identities=19% Similarity=0.370 Sum_probs=87.3
Q ss_pred CCcEEe--CccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEE
Q 014216 160 NESIEL--NSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (428)
Q Consensus 160 ~~v~~l--~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~ 237 (428)
+.+..+ +..++.+.+.+.+++++|.||++||++|+.+.+.+.++++.+ +.+.|+.||++.+.+++++|++.++|+++
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~ 81 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGNAADAYGVSSIPALF 81 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHhcCCCCCCEEE
Confidence 346777 567777666667889999999999999999999999999999 78999999999999999999999999999
Q ss_pred EEcC---CCCCcccccCCCCHHHHHHHHHHHH
Q 014216 238 VFGA---DKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 238 ~~~~---~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+|+. .+....++.|.. .++|...+.++.
T Consensus 82 ~~~~~~~~G~~~~~~~G~~-~~~l~~~~~~~~ 112 (118)
T 2f51_A 82 FVKKEGNEIKTLDQFVGAD-VSRIKADIEKFK 112 (118)
T ss_dssp EEEEETTEEEEEEEEESCC-HHHHHHHHHHHC
T ss_pred EEeCCCCcceEEEeecCCC-HHHHHHHHHHhh
Confidence 9975 133445666654 566888887773
No 196
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.51 E-value=1.5e-13 Score=110.62 Aligned_cols=107 Identities=16% Similarity=0.340 Sum_probs=90.8
Q ss_pred CCCCcEEeC-ccchHHHHh---hcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcC
Q 014216 158 DSNESIELN-SSNFDELVL---KSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGF 233 (428)
Q Consensus 158 ~~~~v~~l~-~~~~~~~~~---~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~ 233 (428)
....+..++ .+++.+.+. ..+++++|.||++||++|+.+.+.+.++++.+. .+.|+.||++.+.+++++|++.++
T Consensus 22 ~~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~ 100 (139)
T 3d22_A 22 AGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELSDFSASWEIKAT 100 (139)
T ss_dssp SCTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCEE
T ss_pred cCCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccHHHHHHcCCCcc
Confidence 455677775 577877664 247899999999999999999999999999984 699999999999999999999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
|++++++ ++.....+.|. +.++|..++.+.+.
T Consensus 101 Pt~~~~~-~G~~~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 101 PTFFFLR-DGQQVDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp SEEEEEE-TTEEEEEEESC-CHHHHHHHHHHHHH
T ss_pred cEEEEEc-CCeEEEEEeCC-CHHHHHHHHHHHhc
Confidence 9999995 44455667787 88999999988875
No 197
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.51 E-value=1.5e-13 Score=120.27 Aligned_cols=104 Identities=16% Similarity=0.335 Sum_probs=92.1
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEEEE--CCCChhHhhHHHHHHHHHHHhc---CCeEEEEEeCCC-----chhHhhh
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVEFF--APWCGHCKKLAPEWKKAANNLK---GKVKLGHVDCDS-----EKSLMSK 227 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~f~--~~~c~~c~~~~~~~~~~a~~~~---~~~~f~~v~~~~-----~~~~~~~ 227 (428)
..+.++.++..+|.+.+ ..+.+++|.|| ++||+ +.|.|.++|+.+. +.+.|+.|||+. ++++|++
T Consensus 14 ~~~~v~~Lt~~nF~~vi-~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~ 88 (248)
T 2c0g_A 14 TCTGCVDLDELSFEKTV-ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDR 88 (248)
T ss_dssp -CTTCEECCTTTHHHHH-TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHH
T ss_pred CCCCcEECCHHHHHHHH-hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHH
Confidence 46678999999999954 77789999999 99998 9999999999994 479999999998 8999999
Q ss_pred cCCC--cCcEEEEEcCCC-CCcccc--cCCCCHHHHHHHHHHHHh
Q 014216 228 FNVQ--GFPTILVFGADK-DSPIPY--EGARTAGAIESFALEQLE 267 (428)
Q Consensus 228 ~~v~--~~P~i~~~~~~~-~~~~~y--~g~~~~~~i~~fi~~~~~ 267 (428)
|+|+ ++|++++|+ +. ..+..| .|..+.+.|.+|+.+++.
T Consensus 89 ~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 89 YKVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp TTCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred hCCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhc
Confidence 9999 999999998 65 346788 899999999999999864
No 198
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.51 E-value=3.4e-14 Score=106.57 Aligned_cols=97 Identities=18% Similarity=0.203 Sum_probs=78.7
Q ss_pred CcEEeCc-cchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHh----HHHHcCCcc-cc
Q 014216 31 PVVQLTP-NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQS----LAQEYGIRG-FP 104 (428)
Q Consensus 31 ~~~~l~~-~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~----l~~~~~v~~-~P 104 (428)
....++. ++|+ .+++++++++|.|+|+||++|+.+.|.+++++.. +.+.|+.||+++++. ++.++||++ .|
T Consensus 7 ~~~~i~s~e~f~-~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sP 83 (112)
T 3iv4_A 7 VAIKLSSIDQFE-QVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHESP 83 (112)
T ss_dssp CEEECCSHHHHH-HHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSS
T ss_pred ceeecCCHHHHH-HHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCCC
Confidence 3456654 5676 5667799999999999999999999999999985 568999999999976 799999995 99
Q ss_pred EEEEEeCCCCCcc-ccCCCCcchHHHH
Q 014216 105 TIKVFVPGKPPVD-YQGARDVKPIAEF 130 (428)
Q Consensus 105 ~~~~~~~g~~~~~-~~g~~~~~~l~~~ 130 (428)
++++|++|+.+.+ --+..+.+.|.+.
T Consensus 84 q~il~k~G~~v~~~SH~~I~~~~l~~~ 110 (112)
T 3iv4_A 84 QAFYFVNGEMVWNRDHGDINVSSLAQA 110 (112)
T ss_dssp EEEEEETTEEEEEEEGGGCSHHHHHHH
T ss_pred eEEEEECCEEEEEeeccccCHHHHHHh
Confidence 9999999987443 3456666666543
No 199
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.51 E-value=1.3e-13 Score=106.59 Aligned_cols=105 Identities=25% Similarity=0.452 Sum_probs=88.6
Q ss_pred CCCcEEe-CccchHHHHhh---cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCc
Q 014216 159 SNESIEL-NSSNFDELVLK---SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFP 234 (428)
Q Consensus 159 ~~~v~~l-~~~~~~~~~~~---~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P 234 (428)
...+..+ +.+++.+.+.. .+++++|.||++||++|+.+.+.+.++++.+. .+.|+.+|++..+.++++|++.++|
T Consensus 3 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~P 81 (113)
T 1ti3_A 3 EGQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKAVAEEWNVEAMP 81 (113)
T ss_dssp CCCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHHHHHHHHCSSTT
T ss_pred CCceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHHHHHhCCCCccc
Confidence 3457777 55777777654 47799999999999999999999999999987 7999999999999999999999999
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 235 TILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
++++++ ++.....+.| .+.+.|.+++.+.+
T Consensus 82 t~~~~~-~G~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 82 TFIFLK-DGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp EEEEEE-TTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred EEEEEe-CCEEEEEEec-CCHHHHHHHHHHhh
Confidence 999996 3444456677 68899999988765
No 200
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.50 E-value=4.4e-14 Score=108.70 Aligned_cols=100 Identities=17% Similarity=0.277 Sum_probs=86.1
Q ss_pred EEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCC
Q 014216 163 IELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGAD 242 (428)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~ 242 (428)
..++.++| +.+ ..+++++|.||++||++|+.+.+.+.++++.+. .+.|+.+|++...+++++|++.++|++++|+ +
T Consensus 6 ~~~~~~~f-~~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~-~ 81 (110)
T 2l6c_A 6 DITTEAGM-AHF-EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARPELMKELGFERVPTLVFIR-D 81 (110)
T ss_dssp BCGGGCSH-HHH-TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEE-S
T ss_pred ecCCHHHH-HHH-HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCHHHHHHcCCcccCEEEEEE-C
Confidence 45677788 555 467889999999999999999999999999876 6999999999999999999999999999995 4
Q ss_pred CCCcccccCCCCHHHHHHHHHHHH
Q 014216 243 KDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 243 ~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
++...++.|..+.++|..++....
T Consensus 82 G~~v~~~~G~~~~~~l~~~~~~~~ 105 (110)
T 2l6c_A 82 GKVAKVFSGIMNPRELQALYASIH 105 (110)
T ss_dssp SSEEEEEESCCCHHHHHHHHHTC-
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHh
Confidence 555677889999999999987664
No 201
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.25 E-value=1.6e-15 Score=115.83 Aligned_cols=103 Identities=31% Similarity=0.603 Sum_probs=90.6
Q ss_pred cEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcC
Q 014216 162 SIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGA 241 (428)
Q Consensus 162 v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~ 241 (428)
+.+++.+++.+.+...+++++|.||++||++|+.+.+.+.++++.+.+.+.|+.+|++.+..++++|++.++|++++|+
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~- 81 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFK- 81 (106)
Confidence 5677888888776677889999999999999999999999999999888999999999999999999999999999995
Q ss_pred CCCCcccccCCCCHHHHHHHHHHH
Q 014216 242 DKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 242 ~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
+++....+.|..+.+.+.+++.+.
T Consensus 82 ~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 82 NGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 455566788988888998887654
No 202
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.50 E-value=6.3e-14 Score=109.84 Aligned_cols=106 Identities=20% Similarity=0.482 Sum_probs=90.8
Q ss_pred CCCCcEEeCc-cchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCCchhHhhhcCCCcCcE
Q 014216 158 DSNESIELNS-SNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDSEKSLMSKFNVQGFPT 235 (428)
Q Consensus 158 ~~~~v~~l~~-~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~~~~~~~~~~v~~~P~ 235 (428)
....+..+++ +++.+.+ ..+++++|.||++||++|+.+.+.+.++++.+.+. +.|+.||++.+.+++++|++.++|+
T Consensus 13 ~~~~~~~i~~~~~f~~~l-~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt 91 (121)
T 2j23_A 13 PRGSVQVISSYDQFKQVT-GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPT 91 (121)
T ss_dssp CCCCEEECCSHHHHHHHH-SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSE
T ss_pred CCcceEEcCCHHHHHHHH-cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccE
Confidence 3566777777 6676665 77889999999999999999999999999998875 9999999999999999999999999
Q ss_pred EEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 236 ILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 236 i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+++|+ ++.....+.|. +.+.|.+|+.+.+
T Consensus 92 ~~~~~-~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 92 FVFFK-NGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEEE-TTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred EEEEE-CCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 99996 44445667888 9999999987763
No 203
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.50 E-value=1.8e-13 Score=106.59 Aligned_cols=105 Identities=24% Similarity=0.449 Sum_probs=89.3
Q ss_pred CCCcEEeC-ccchHHHHhh---cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCc
Q 014216 159 SNESIELN-SSNFDELVLK---SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFP 234 (428)
Q Consensus 159 ~~~v~~l~-~~~~~~~~~~---~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P 234 (428)
...+..++ .+++.+.+.. .+++++|.||++||++|+.+.+.+.++++.+. .+.|+.+|++.+++++++|++.++|
T Consensus 5 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~P 83 (118)
T 2vm1_A 5 EGAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELKDVAEAYNVEAMP 83 (118)
T ss_dssp CCCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSBS
T ss_pred CCceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCHHHHHHcCCCcCc
Confidence 45677884 5777777644 37899999999999999999999999999987 7999999999999999999999999
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 235 TILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+++++++ ++....+.| .+.+.+.+++.+.+
T Consensus 84 t~~~~~~-g~~~~~~~g-~~~~~l~~~l~~~~ 113 (118)
T 2vm1_A 84 TFLFIKD-GEKVDSVVG-GRKDDIHTKIVALM 113 (118)
T ss_dssp EEEEEET-TEEEEEEES-CCHHHHHHHHHHHH
T ss_pred EEEEEeC-CeEEEEecC-CCHHHHHHHHHHHh
Confidence 9999964 444556677 58899999998876
No 204
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.49 E-value=3.4e-13 Score=107.42 Aligned_cols=110 Identities=17% Similarity=0.288 Sum_probs=95.1
Q ss_pred CCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCc--CcEE
Q 014216 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQG--FPTI 236 (428)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~--~P~i 236 (428)
.+-+.+++.+++.+.+ ....+++|.||++ |++|+.+.+.+.++|+.|++++.|+.+|.+++..++++||+++ +|++
T Consensus 5 ~plv~~~t~~~f~~~~-~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl 82 (133)
T 2djk_A 5 SPLIGEIGPETYSDYM-SAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAF 82 (133)
T ss_dssp CCCSEECCHHHHHHHH-HTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEE
T ss_pred cCceeccChHHHHHHh-cCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEE
Confidence 4558899999998774 6777899999999 8999999999999999999999999999999999999999999 9999
Q ss_pred EEEcCCCCCccccc--CCCCHHHHHHHHHHHHhhcC
Q 014216 237 LVFGADKDSPIPYE--GARTAGAIESFALEQLETNV 270 (428)
Q Consensus 237 ~~~~~~~~~~~~y~--g~~~~~~i~~fi~~~~~~~~ 270 (428)
++|+.+++..+.+. |..+.+.|..|+.+.+....
T Consensus 83 ~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl 118 (133)
T 2djk_A 83 AIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKI 118 (133)
T ss_dssp EEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCC
T ss_pred EEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCc
Confidence 99985223345655 99999999999999876443
No 205
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.48 E-value=4.9e-13 Score=106.84 Aligned_cols=103 Identities=14% Similarity=0.148 Sum_probs=86.2
Q ss_pred CCCCcEEeCccchHHHHhhcC--CeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcE
Q 014216 158 DSNESIELNSSNFDELVLKSK--DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~--~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~ 235 (428)
....+..++.+++.+.+.... ++++|.||++||++|+.+.+.|.++++.+. .+.|+.||++... ++|+|..+|+
T Consensus 8 ~~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~---~~~~i~~~Pt 83 (135)
T 2dbc_A 8 KFGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI---EHYHDNCLPT 83 (135)
T ss_dssp CCCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC---SSCCSSCCSE
T ss_pred CCCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc---ccCCCCCCCE
Confidence 456688899999998875533 589999999999999999999999999985 6999999987764 7999999999
Q ss_pred EEEEcCCCCCcccccCCC-------CHHHHHHHHHHH
Q 014216 236 ILVFGADKDSPIPYEGAR-------TAGAIESFALEQ 265 (428)
Q Consensus 236 i~~~~~~~~~~~~y~g~~-------~~~~i~~fi~~~ 265 (428)
+++|++ ++...++.|.. +.+.|..++.++
T Consensus 84 ~~~~~~-G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 84 IFVYKN-GQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp EEEESS-SSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EEEEEC-CEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 999984 44556666654 788999998877
No 206
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.48 E-value=1.7e-14 Score=119.41 Aligned_cols=99 Identities=14% Similarity=0.285 Sum_probs=81.0
Q ss_pred chHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHh-HHHHcCC--ccccEEEEE-eCCCC
Q 014216 39 NFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQS-LAQEYGI--RGFPTIKVF-VPGKP 114 (428)
Q Consensus 39 ~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~-l~~~~~v--~~~P~~~~~-~~g~~ 114 (428)
.+. ....++++++|+||++||++|+.+.|.|.+++......+.|+.||++.+.. ++.++++ .++|++++| .+|+.
T Consensus 38 ~~~-~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~ 116 (164)
T 1sen_A 38 GKK-EAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKV 116 (164)
T ss_dssp HHH-HHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCB
T ss_pred HHH-HHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCE
Confidence 344 344568999999999999999999999999877665556788888888777 8889998 669999999 78887
Q ss_pred CccccCC----------CCcchHHHHHHHHHHHH
Q 014216 115 PVDYQGA----------RDVKPIAEFALQQIKAL 138 (428)
Q Consensus 115 ~~~~~g~----------~~~~~l~~~i~~~l~~~ 138 (428)
+.++.|. .+.+.+.++|.+.+...
T Consensus 117 ~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 150 (164)
T 1sen_A 117 HPEIINENGNPSYKYFYVSAEQVVQGMKEAQERL 150 (164)
T ss_dssp CTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCccchhcccCCHHHHHHHHHHHHHhc
Confidence 7778884 77888999998877543
No 207
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.47 E-value=7.9e-14 Score=114.21 Aligned_cols=89 Identities=16% Similarity=0.273 Sum_probs=77.2
Q ss_pred cCCCeEEEEEE-CCCChhhhhhhHHH---HHHHHHhcCceEEEEEcCccc-----------HhHHHHcCCccccEEEEE-
Q 014216 46 NANGVVLVEFY-APWCGHCQALTPIW---EKAATVLKGVATVAALDANEH-----------QSLAQEYGIRGFPTIKVF- 109 (428)
Q Consensus 46 ~~~~~~lv~f~-~~~C~~C~~~~~~~---~~~~~~~~~~v~~~~vd~~~~-----------~~l~~~~~v~~~P~~~~~- 109 (428)
.++++++|+|| ++||++|+++.|.+ .++.+..+..+.++.+|+++. ..++++|+|.++|+++++
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~d 124 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFID 124 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEEC
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEEc
Confidence 35899999999 99999999999999 777776656789999999765 489999999999999999
Q ss_pred eCCCCCccccCCC--CcchHHHHHHHHH
Q 014216 110 VPGKPPVDYQGAR--DVKPIAEFALQQI 135 (428)
Q Consensus 110 ~~g~~~~~~~g~~--~~~~l~~~i~~~l 135 (428)
.+|+.+.++ |.. +.+.+.++|.+.+
T Consensus 125 ~~G~~~~~~-G~~~~~~~~l~~~l~~~l 151 (154)
T 2ju5_A 125 AEGKQLARM-GFEPGGGAAYVSKVKSAL 151 (154)
T ss_dssp TTCCEEEEE-CCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEe-cCCCCCHHHHHHHHHHHH
Confidence 678777788 988 8888999888765
No 208
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.47 E-value=7e-14 Score=109.07 Aligned_cols=103 Identities=13% Similarity=0.151 Sum_probs=83.7
Q ss_pred CCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC----CchhHhhhcCCCcCc
Q 014216 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD----SEKSLMSKFNVQGFP 234 (428)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~----~~~~~~~~~~v~~~P 234 (428)
...+..++.+++...+ ..+++++|.||++||++|+.+.|.+.++++.+...+.++.++.. ....++++|+|.++|
T Consensus 11 ~~~~~~~~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~P 89 (118)
T 1zma_A 11 IKDLEVTTVVRAQEAL-DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVP 89 (118)
T ss_dssp TTTSEECCHHHHHHHH-HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSC
T ss_pred HhhhhcCCHHHHHHHH-hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCC
Confidence 4567888999998876 56779999999999999999999999999998766666543321 124788999999999
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHHHH
Q 014216 235 TILVFGADKDSPIPYEGARTAGAIESFAL 263 (428)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~fi~ 263 (428)
++++|++ ++...++.|..+.+.|.+|+.
T Consensus 90 t~~~~~~-G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 90 GFVHITD-GQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp EEEEEET-TEEEEECCTTCCHHHHHHHHT
T ss_pred eEEEEEC-CEEEEEecCCCCHHHHHHHhh
Confidence 9999974 445677889999999998874
No 209
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.47 E-value=4.8e-13 Score=116.74 Aligned_cols=103 Identities=22% Similarity=0.461 Sum_probs=91.5
Q ss_pred CCCcEEeCccchHHHHhhcCCeEEEEEEC--CCChhHhhHHHHHHHHHHHhc--CCeEEEEEe-----CCCchhHhhhcC
Q 014216 159 SNESIELNSSNFDELVLKSKDLWIVEFFA--PWCGHCKKLAPEWKKAANNLK--GKVKLGHVD-----CDSEKSLMSKFN 229 (428)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~~v~f~~--~~c~~c~~~~~~~~~~a~~~~--~~~~f~~v~-----~~~~~~~~~~~~ 229 (428)
...++.++..+|.+.+ ..+.+++|.||+ +||+ +.|.|.++|+.+. +.+.|+.|| |+.++++|++|+
T Consensus 4 ~~~v~~Lt~~nF~~~i-~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~ 78 (240)
T 2qc7_A 4 TKGALPLDTVTFYKVI-PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYK 78 (240)
T ss_dssp CTTCEECCTTHHHHHG-GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTT
T ss_pred CCCceECCHHHHHHHH-cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcC
Confidence 4578999999999865 677899999999 9998 9999999999996 369999999 555899999999
Q ss_pred CC--cCcEEEEEcCCC-CCcccccCCCCHHHHHHHHHHHH
Q 014216 230 VQ--GFPTILVFGADK-DSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 230 v~--~~P~i~~~~~~~-~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
|+ ++|++++|+.+. ..+..|.|..+.+.|.+|+.++.
T Consensus 79 V~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 79 LDKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CCGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 99 999999998765 35789999999999999999885
No 210
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.47 E-value=2.9e-13 Score=109.93 Aligned_cols=102 Identities=15% Similarity=0.226 Sum_probs=87.1
Q ss_pred EEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcC------------------------
Q 014216 33 VQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA------------------------ 88 (428)
Q Consensus 33 ~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~------------------------ 88 (428)
..++.+.+.... .++++++|.||++||++|+...|.+.++++.+.+++.++.|++
T Consensus 15 ~~~~g~~~~~~~-~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (148)
T 2b5x_A 15 AWLNGEVTREQL-IGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQP 93 (148)
T ss_dssp EEESCCCCHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSC
T ss_pred ccccCcccchhh-cCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcc
Confidence 566777776433 3689999999999999999999999999999988788998985
Q ss_pred ---cccHhHHHHcCCccccEEEEE-eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 89 ---NEHQSLAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 89 ---~~~~~l~~~~~v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+.+..++++|++.++|+++++ ++|+.+.++.|..+.+.+.++|.+.+
T Consensus 94 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 144 (148)
T 2b5x_A 94 IFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVL 144 (148)
T ss_dssp EEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHH
T ss_pred eEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHH
Confidence 445689999999999999999 67777778889999999999998775
No 211
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.46 E-value=1.3e-14 Score=110.48 Aligned_cols=75 Identities=23% Similarity=0.431 Sum_probs=63.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCc------ccHhHHHHcCCccccEEEEEeCCCCCccccC
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN------EHQSLAQEYGIRGFPTIKVFVPGKPPVDYQG 120 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~------~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g 120 (428)
.+++++|.||++||++|+++.|.|.+++..++ .|||+ +++++|++|+|+++||+++ +|+ .|.|
T Consensus 11 ~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~---~~~G 79 (106)
T 3kp8_A 11 LRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR---TYTG 79 (106)
T ss_dssp HHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE---EEES
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE---EecC
Confidence 36678999999999999999999999987664 45555 6789999999999999776 664 4889
Q ss_pred CCCcchHHHHHH
Q 014216 121 ARDVKPIAEFAL 132 (428)
Q Consensus 121 ~~~~~~l~~~i~ 132 (428)
.++.+.|.+|+.
T Consensus 80 ~~~~~~l~~~~~ 91 (106)
T 3kp8_A 80 VRSLEALAVASG 91 (106)
T ss_dssp CCCHHHHHHHHT
T ss_pred CCCHHHHHHHhC
Confidence 999999988874
No 212
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.46 E-value=5.3e-14 Score=112.18 Aligned_cols=107 Identities=22% Similarity=0.357 Sum_probs=87.7
Q ss_pred CCCCCcEEeCc-cchHHHHhhc-CCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCc
Q 014216 157 SDSNESIELNS-SNFDELVLKS-KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFP 234 (428)
Q Consensus 157 ~~~~~v~~l~~-~~~~~~~~~~-~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P 234 (428)
.....+..+++ +++...+... +++++|.||++||++|+.+.+.|.++++.+ .+.|+.||++.+.+++++|+|+++|
T Consensus 17 ~~~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~~l~~~~~v~~~P 94 (133)
T 3cxg_A 17 QGQSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHPKLNDQHNIKALP 94 (133)
T ss_dssp ETTEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCHHHHHHTTCCSSS
T ss_pred cCCccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchHHHHHhcCCCCCC
Confidence 34566888886 6676665433 469999999999999999999999998877 5999999999999999999999999
Q ss_pred EEEEEc--CCC-CCcccccCCCCHHHHHHHHHHHH
Q 014216 235 TILVFG--ADK-DSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 235 ~i~~~~--~~~-~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
++++|+ ++. .....+.|. +.++|.+++.+.+
T Consensus 95 t~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l 128 (133)
T 3cxg_A 95 TFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYC 128 (133)
T ss_dssp EEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHS
T ss_pred EEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHH
Confidence 999995 332 144567777 8999999998775
No 213
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.45 E-value=2e-13 Score=109.22 Aligned_cols=87 Identities=15% Similarity=0.301 Sum_probs=77.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcc----------------------cHhHHHHcCCcccc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANE----------------------HQSLAQEYGIRGFP 104 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~----------------------~~~l~~~~~v~~~P 104 (428)
++++++|.||++||++|+...+.+.++++.++ .+.++.|+++. +..++++|++.++|
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P 101 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQP 101 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCC
Confidence 57899999999999999999999999999998 78999999977 67899999999999
Q ss_pred EEEEE-eCCCCCcccc---CCCCcchHHHHHHHHH
Q 014216 105 TIKVF-VPGKPPVDYQ---GARDVKPIAEFALQQI 135 (428)
Q Consensus 105 ~~~~~-~~g~~~~~~~---g~~~~~~l~~~i~~~l 135 (428)
+++++ ++|+.. ++. |..+.+.+.+++.+.+
T Consensus 102 ~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 102 AFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp EEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred EEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 99999 566655 888 9999999999987653
No 214
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.45 E-value=2.7e-13 Score=107.70 Aligned_cols=107 Identities=22% Similarity=0.392 Sum_probs=89.3
Q ss_pred cEEeCccchHHHHh---hcCCeEEEEEECCCChhHhhHHHHH---HHHHHHhcCCeEEEEEeCC--CchhHhhhcCCCcC
Q 014216 162 SIELNSSNFDELVL---KSKDLWIVEFFAPWCGHCKKLAPEW---KKAANNLKGKVKLGHVDCD--SEKSLMSKFNVQGF 233 (428)
Q Consensus 162 v~~l~~~~~~~~~~---~~~~~~~v~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~f~~v~~~--~~~~~~~~~~v~~~ 233 (428)
...++..++.+.+. ..+++++|.||++||++|+.+.+.+ ..+++.+...+.++.||++ ....++++|++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~ 87 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAY 87 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSS
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCC
Confidence 34456677776653 3578999999999999999999999 7788877777999999987 46789999999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhh
Q 014216 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQLET 268 (428)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (428)
|+++++..+++....+.|..+.++|.+++.+.+..
T Consensus 88 Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 88 PTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp CEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 99999965666666788999999999999988643
No 215
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.44 E-value=5.3e-13 Score=110.60 Aligned_cols=105 Identities=22% Similarity=0.357 Sum_probs=86.9
Q ss_pred CcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcccHhHHHHc-----------
Q 014216 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANEHQSLAQEY----------- 98 (428)
Q Consensus 31 ~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~~~~l~~~~----------- 98 (428)
.+..++.+.+.... .++++++|.||++||++|+...|.+.++.+.+++. +.++.|+++.....++++
T Consensus 18 ~l~~~~g~~~~l~~-~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~ 96 (165)
T 3or5_A 18 SGVTVDGKPFSSAS-LKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVM 96 (165)
T ss_dssp EEECTTSCEEEGGG-GTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEE
T ss_pred eeeCCCCCEechhH-cCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceE
Confidence 34455555555222 25789999999999999999999999999999875 999999999877777766
Q ss_pred ----------------CCccccEEEEE-eCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 99 ----------------GIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 99 ----------------~v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
++.++|+++++ ++|+.+.++.|..+.+.+.++|.+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 151 (165)
T 3or5_A 97 MATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALG 151 (165)
T ss_dssp ECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC
T ss_pred ecCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 89999999999 677767788899999999999988864
No 216
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.43 E-value=3.7e-13 Score=107.55 Aligned_cols=101 Identities=17% Similarity=0.304 Sum_probs=82.6
Q ss_pred cEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcc---------------------
Q 014216 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANE--------------------- 90 (428)
Q Consensus 32 ~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~--------------------- 90 (428)
+..++.+.+.... .++++++|.||++||++|+...+.+.++.+.++ ++.++.|+++.
T Consensus 10 ~~~~~g~~~~l~~-~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (136)
T 1zzo_A 10 AKTLDGHDFHGES-LLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLA 87 (136)
T ss_dssp EEBTTSCEEEGGG-GTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEE
T ss_pred cccCCCCEeeHHH-hCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEE
Confidence 3344445554222 257899999999999999999999999999998 78999999853
Q ss_pred --cHhHHHHcCCccccEEEEEe-CCCCCccccCCCCcchHHHHHHHHH
Q 014216 91 --HQSLAQEYGIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 91 --~~~l~~~~~v~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+..++++|++.++|+++++. +|+.+ ++.|..+.+.+.+++.+.+
T Consensus 88 d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 88 DTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp CTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred cCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 56889999999999999995 66655 8999999999999988764
No 217
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.43 E-value=2.6e-13 Score=96.93 Aligned_cols=74 Identities=20% Similarity=0.317 Sum_probs=63.8
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEeCCCCCccccCCC-CcchHHH
Q 014216 51 VLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGAR-DVKPIAE 129 (428)
Q Consensus 51 ~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~-~~~~l~~ 129 (428)
..|.||++||++|+.+.|.++++++.+++.+.++.+| +.+++++|+|.++|++++ +|+.+.+ |.. +.+.+.+
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~~~~--G~~~~~~~l~~ 74 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGLAV--DGELKIM--GRVASKEEIKK 74 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCEEE--TTEEEEC--SSCCCHHHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEEEE--CCEEEEc--CCCCCHHHHHH
Confidence 3589999999999999999999999998889999998 789999999999999887 7764333 887 8888877
Q ss_pred HH
Q 014216 130 FA 131 (428)
Q Consensus 130 ~i 131 (428)
++
T Consensus 75 ~l 76 (77)
T 1ilo_A 75 IL 76 (77)
T ss_dssp HC
T ss_pred Hh
Confidence 64
No 218
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.43 E-value=1.1e-12 Score=104.64 Aligned_cols=107 Identities=17% Similarity=0.368 Sum_probs=85.7
Q ss_pred CCCCcEEeCc-cchHHHHhh-cCCeEEEEEECCCChhHhhHHHHH---HHHHHHhcCCeEEEEEeC----CCchhHhhhc
Q 014216 158 DSNESIELNS-SNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEW---KKAANNLKGKVKLGHVDC----DSEKSLMSKF 228 (428)
Q Consensus 158 ~~~~v~~l~~-~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~f~~v~~----~~~~~~~~~~ 228 (428)
..+.+..++. +.+...+.. .+++++|.||++||++|+.+.+.+ .++++.+.+ +.++.||+ +....++++|
T Consensus 9 ~~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~ 87 (134)
T 2fwh_A 9 THLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHL 87 (134)
T ss_dssp -CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHT
T ss_pred cCCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHc
Confidence 3455565544 555555533 377999999999999999999999 899999875 99999999 4456899999
Q ss_pred CCCcCcEEEEEcCCCCCc--ccccCCCCHHHHHHHHHHH
Q 014216 229 NVQGFPTILVFGADKDSP--IPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 229 ~v~~~P~i~~~~~~~~~~--~~y~g~~~~~~i~~fi~~~ 265 (428)
++.++|++++|..+++.. .++.|..+.++|.+++.+.
T Consensus 88 ~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 88 NVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp TCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred CCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 999999999995555544 5789999999999998765
No 219
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.42 E-value=4.2e-13 Score=97.82 Aligned_cols=82 Identities=21% Similarity=0.361 Sum_probs=74.0
Q ss_pred CeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHH
Q 014216 179 DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAI 258 (428)
Q Consensus 179 ~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i 258 (428)
.+.++.|+++||++|+.+.+.++++++.+.+.+.|..+|++.+++++++|++.++|++++ +++ . .+.|..+.+++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~---~G~-~-~~~G~~~~~~l 77 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI---NGD-V-EFIGAPTKEAL 77 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE---TTE-E-ECCSSSSSHHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE---CCE-E-eeecCCCHHHH
Confidence 468999999999999999999999999998889999999999999999999999999999 332 3 78898899999
Q ss_pred HHHHHHH
Q 014216 259 ESFALEQ 265 (428)
Q Consensus 259 ~~fi~~~ 265 (428)
.+++.+.
T Consensus 78 ~~~l~~~ 84 (85)
T 1fo5_A 78 VEAIKKR 84 (85)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998765
No 220
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.41 E-value=6.4e-13 Score=114.73 Aligned_cols=104 Identities=20% Similarity=0.272 Sum_probs=87.1
Q ss_pred CCCcEEe-CccchHHHHhhcC--CeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcE
Q 014216 159 SNESIEL-NSSNFDELVLKSK--DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (428)
Q Consensus 159 ~~~v~~l-~~~~~~~~~~~~~--~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~ 235 (428)
...+..+ +..+|.+.+.... .+++|.||++||++|+.+.+.|.++|..+. .+.|+.||++ +..++.+|+|.++|+
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~~~l~~~~~i~~~PT 175 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-NTGAGDRFSSDVLPT 175 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-HHTCSTTSCGGGCSE
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-cHHHHHHCCCCCCCE
Confidence 4568888 7889988876554 799999999999999999999999999985 7999999998 778999999999999
Q ss_pred EEEEcCCCCCcccccCCCC-------HHHHHHHHHHH
Q 014216 236 ILVFGADKDSPIPYEGART-------AGAIESFALEQ 265 (428)
Q Consensus 236 i~~~~~~~~~~~~y~g~~~-------~~~i~~fi~~~ 265 (428)
+++|+. +.....+.|..+ .+.|..|+.++
T Consensus 176 l~~~~~-G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 176 LLVYKG-GELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp EEEEET-TEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred EEEEEC-CEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999974 444556667554 38888887665
No 221
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.41 E-value=8.2e-13 Score=105.31 Aligned_cols=90 Identities=19% Similarity=0.393 Sum_probs=79.3
Q ss_pred hcCCeEEEEEECCCChhHhhHHHHHH--HHHHHhcCCeEEEEEeC---CCchhHhhhcCC---CcCcEEEEEcCCCCCcc
Q 014216 176 KSKDLWIVEFFAPWCGHCKKLAPEWK--KAANNLKGKVKLGHVDC---DSEKSLMSKFNV---QGFPTILVFGADKDSPI 247 (428)
Q Consensus 176 ~~~~~~~v~f~~~~c~~c~~~~~~~~--~~a~~~~~~~~f~~v~~---~~~~~~~~~~~v---~~~P~i~~~~~~~~~~~ 247 (428)
..+++++|.||++||++|+.+.+.|. ++++.+.+.+.++.||+ +.+.+++++|++ .++|++++|..+++...
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~ 106 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRY 106 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEE
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEE
Confidence 45889999999999999999999999 99999977899999999 888999999999 99999999965666566
Q ss_pred cccC-------CCCHHHHHHHHHHH
Q 014216 248 PYEG-------ARTAGAIESFALEQ 265 (428)
Q Consensus 248 ~y~g-------~~~~~~i~~fi~~~ 265 (428)
.+.| ..+.+++..|+.+.
T Consensus 107 ~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 107 TTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp ECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EecCCcccccccCCHHHHHHHHHHh
Confidence 6667 57889999998654
No 222
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.40 E-value=5.3e-13 Score=97.30 Aligned_cols=82 Identities=15% Similarity=0.272 Sum_probs=73.7
Q ss_pred eEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHH
Q 014216 180 LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIE 259 (428)
Q Consensus 180 ~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~ 259 (428)
+.++.|+++||++|+.+.+.++++++.+.+.+.|..+|++.+.+++++||+.++|++++ +++ . .+.|..+.+.+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~---~G~-~-~~~G~~~~~~l~ 77 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI---NGV-V-RFVGAPSREELF 77 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE---TTT-E-EEECSSCCHHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE---CCE-E-EEccCCCHHHHH
Confidence 46899999999999999999999999999889999999999999999999999999999 333 3 788988999999
Q ss_pred HHHHHHH
Q 014216 260 SFALEQL 266 (428)
Q Consensus 260 ~fi~~~~ 266 (428)
+++.+.+
T Consensus 78 ~~l~~~l 84 (85)
T 1nho_A 78 EAINDEM 84 (85)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9987763
No 223
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.39 E-value=2.4e-13 Score=128.95 Aligned_cols=98 Identities=23% Similarity=0.418 Sum_probs=83.9
Q ss_pred CCCCcEEeCccchHHHHhh-cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcC--------CeEEEEEeCCCchhHhhhc
Q 014216 158 DSNESIELNSSNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG--------KVKLGHVDCDSEKSLMSKF 228 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~-~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~--------~~~f~~v~~~~~~~~~~~~ 228 (428)
....++.++.++|...+.. ..++++|.||++||++|+.+.|.|.++++.+.. .+.|+.||++.+.+++++|
T Consensus 21 ~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y 100 (470)
T 3qcp_A 21 LDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKY 100 (470)
T ss_dssp TCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHT
T ss_pred CCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHc
Confidence 4677999999999987743 346899999999999999999999999999972 5999999999999999999
Q ss_pred CCCcCcEEEEEcCCC-CCcccccCCCCH
Q 014216 229 NVQGFPTILVFGADK-DSPIPYEGARTA 255 (428)
Q Consensus 229 ~v~~~P~i~~~~~~~-~~~~~y~g~~~~ 255 (428)
+|.++|++++|++++ .....|.|..+.
T Consensus 101 ~V~~~PTlilf~~gg~~~~~~y~G~r~~ 128 (470)
T 3qcp_A 101 DINFVPRLFFFYPRDSCRSNEECGTSSL 128 (470)
T ss_dssp TCCSSCEEEEEEESSCCCTTSCCCCCCE
T ss_pred CCCccCeEEEEECCCceEEEEeeCCCCH
Confidence 999999999996543 456788886433
No 224
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.39 E-value=1.2e-12 Score=102.68 Aligned_cols=101 Identities=17% Similarity=0.297 Sum_probs=83.4
Q ss_pred CcEEeCccchHHHHhh-cCCeEEEEEECC-------CChhHhhHHHHHHHHHHHhcCCeEEEEEeC-------CCchhHh
Q 014216 161 ESIELNSSNFDELVLK-SKDLWIVEFFAP-------WCGHCKKLAPEWKKAANNLKGKVKLGHVDC-------DSEKSLM 225 (428)
Q Consensus 161 ~v~~l~~~~~~~~~~~-~~~~~~v~f~~~-------~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~-------~~~~~~~ 225 (428)
.+...+.+++.+.+.. .+++++|.||++ ||++|+.+.+.+.++++.+.+.+.|+.||+ +.+..++
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~ 85 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFR 85 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHH
Confidence 3555677888887755 478999999999 999999999999999999988899999999 7788999
Q ss_pred hhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHH
Q 014216 226 SKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFAL 263 (428)
Q Consensus 226 ~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~ 263 (428)
++|+|+++|++++|++ +.....+.| .+.+.|..|+.
T Consensus 86 ~~~~i~~~Pt~~~~~~-~~~~~g~~~-~~~~~l~~~i~ 121 (123)
T 1wou_A 86 KNLKVTAVPTLLKYGT-PQKLVESEC-LQANLVEMLFS 121 (123)
T ss_dssp HHHCCCSSSEEEETTS-SCEEEGGGG-GCHHHHHHHHH
T ss_pred HHCCCCeeCEEEEEcC-CceEecccc-CCHHHHHHHHh
Confidence 9999999999999975 333333433 56788888875
No 225
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.39 E-value=1.1e-12 Score=106.00 Aligned_cols=85 Identities=16% Similarity=0.359 Sum_probs=76.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhc-CceEEEEEcCcc-------------------------cHhHHHHcCC
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLK-GVATVAALDANE-------------------------HQSLAQEYGI 100 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-~~v~~~~vd~~~-------------------------~~~l~~~~~v 100 (428)
++++++|.||++||++|+.+.|.+.++.+.++ ..+.++.|+++. +..++++|++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 68899999999999999999999999999998 468899998864 5689999999
Q ss_pred ccccEEEEE-eCCCCCccccCCCCcchHHHHH
Q 014216 101 RGFPTIKVF-VPGKPPVDYQGARDVKPIAEFA 131 (428)
Q Consensus 101 ~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i 131 (428)
.++|+++++ ++|+.+..+.|..+.+.+.++|
T Consensus 113 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 113 ITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred CccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 999999999 6777777899999999888776
No 226
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.38 E-value=9.4e-13 Score=108.60 Aligned_cols=98 Identities=18% Similarity=0.298 Sum_probs=76.2
Q ss_pred ccchHHHhhcCCCeEEEEEECCCChhhhhhhHH-H--HHHHHHhcCceEEEEEcCcccHhHHHHc--------CCccccE
Q 014216 37 PNNFKSKVLNANGVVLVEFYAPWCGHCQALTPI-W--EKAATVLKGVATVAALDANEHQSLAQEY--------GIRGFPT 105 (428)
Q Consensus 37 ~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~-~--~~~~~~~~~~v~~~~vd~~~~~~l~~~~--------~v~~~P~ 105 (428)
++.|. .+..++++++|.||++||++|+.+.+. | .++++.+++.+.++.||.++.+++.+.| |+.++|+
T Consensus 29 ~ea~~-~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt 107 (173)
T 3ira_A 29 EEAFE-KARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPL 107 (173)
T ss_dssp HHHHH-HHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSE
T ss_pred HHHHH-HHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcc
Confidence 35566 556779999999999999999999993 3 5677777777899999999999999998 9999999
Q ss_pred EEEEe-CCCCCcc--c---cCCCCcchHHHHHHHHH
Q 014216 106 IKVFV-PGKPPVD--Y---QGARDVKPIAEFALQQI 135 (428)
Q Consensus 106 ~~~~~-~g~~~~~--~---~g~~~~~~l~~~i~~~l 135 (428)
++++. +|+.+.. | .|..+.+.+.++|.+..
T Consensus 108 ~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~ 143 (173)
T 3ira_A 108 NIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIK 143 (173)
T ss_dssp EEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHH
T ss_pred eeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHH
Confidence 99996 6665332 2 12345567777776553
No 227
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.38 E-value=2.1e-12 Score=112.88 Aligned_cols=104 Identities=20% Similarity=0.245 Sum_probs=84.5
Q ss_pred CCCcEEe-CccchHHHHhhc--CCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcE
Q 014216 159 SNESIEL-NSSNFDELVLKS--KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (428)
Q Consensus 159 ~~~v~~l-~~~~~~~~~~~~--~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~ 235 (428)
...+..+ +..+|...+... +.+++|.||++||++|+.+.+.|.++|..+.+ +.|+.||++. ..++.+|+|.++|+
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~-~~l~~~~~I~~~PT 188 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN-TGAGDRFSSDVLPT 188 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH-HCCTTSSCTTTCSE
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc-HHHHHHCCCCCCCE
Confidence 4568888 678898887543 67999999999999999999999999999975 9999999865 77899999999999
Q ss_pred EEEEcCCCCCcccccCC-------CCHHHHHHHHHHH
Q 014216 236 ILVFGADKDSPIPYEGA-------RTAGAIESFALEQ 265 (428)
Q Consensus 236 i~~~~~~~~~~~~y~g~-------~~~~~i~~fi~~~ 265 (428)
+++|+.| .....+.|. .+.+.|..|+.++
T Consensus 189 ll~~~~G-~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 189 LLVYKGG-ELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp EEEEETT-EEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred EEEEECC-EEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 9999844 333334442 4567888888766
No 228
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.38 E-value=1.8e-12 Score=104.71 Aligned_cols=90 Identities=12% Similarity=0.073 Sum_probs=67.1
Q ss_pred HhhcCCCeEEEEEECCCChhhhhhhHHHHHH---HHHhcCceEEEEEcCc-ccHhHHHHcCCccccEEEEEe-CCCCCcc
Q 014216 43 KVLNANGVVLVEFYAPWCGHCQALTPIWEKA---ATVLKGVATVAALDAN-EHQSLAQEYGIRGFPTIKVFV-PGKPPVD 117 (428)
Q Consensus 43 ~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~---~~~~~~~v~~~~vd~~-~~~~l~~~~~v~~~P~~~~~~-~g~~~~~ 117 (428)
.+..++++++|.||++||++|+.+.|.+.+. ....+.. |+.|+++ +..+++.++++.++||++++. +|+.+.+
T Consensus 39 ~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~--fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~~ 116 (151)
T 3ph9_A 39 YAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNK--FIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRAD 116 (151)
T ss_dssp HHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHT--CEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCTT
T ss_pred HHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcC--eEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEEEE
Confidence 4455799999999999999999999998763 2222223 4444553 345678899999999999997 8888888
Q ss_pred ccCC-------CCcchHHHHHHHH
Q 014216 118 YQGA-------RDVKPIAEFALQQ 134 (428)
Q Consensus 118 ~~g~-------~~~~~l~~~i~~~ 134 (428)
..|. ...+++..++...
T Consensus 117 ~~G~~~~~~~~~~~~~~~~ll~~~ 140 (151)
T 3ph9_A 117 IAGRYSNRLYTYEPRDLPLLIENM 140 (151)
T ss_dssp CCCSCTTSTTCCCGGGHHHHHHHH
T ss_pred EeCCcCCcccccchhhHHHHHHHH
Confidence 8888 6666666666543
No 229
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.38 E-value=2.5e-13 Score=107.84 Aligned_cols=107 Identities=24% Similarity=0.471 Sum_probs=90.1
Q ss_pred CCCCcEEeC-ccchHHHHhh---cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcC
Q 014216 158 DSNESIELN-SSNFDELVLK---SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGF 233 (428)
Q Consensus 158 ~~~~v~~l~-~~~~~~~~~~---~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~ 233 (428)
....+..++ .+++.+.+.. .+++++|.||++||++|+.+.+.|.++++.+. .+.|+.||++.+..++++|++.++
T Consensus 12 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~ 90 (130)
T 1wmj_A 12 EEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKEVAEKYNVEAM 90 (130)
T ss_dssp SCSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGGGHHHHTCCSS
T ss_pred cCcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHHHHHHcCCCcc
Confidence 345677774 5778777754 47799999999999999999999999999987 699999999999999999999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
|++++++ ++.....+.| .+.+.|.+++.+.+.
T Consensus 91 Pt~~~~~-~g~~~~~~~g-~~~~~l~~~l~~~~~ 122 (130)
T 1wmj_A 91 PTFLFIK-DGAEADKVVG-ARKDDLQNTIVKHVG 122 (130)
T ss_dssp CCCCBCT-TTTCCBCCCT-TCTTTHHHHHHHHTS
T ss_pred ceEEEEe-CCeEEEEEeC-CCHHHHHHHHHHHHh
Confidence 9999996 4445566777 588899999988764
No 230
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.37 E-value=3e-11 Score=118.95 Aligned_cols=180 Identities=13% Similarity=0.130 Sum_probs=138.2
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEeCCCC-CccccCCCCcch
Q 014216 48 NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKP-PVDYQGARDVKP 126 (428)
Q Consensus 48 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~g~~-~~~~~g~~~~~~ 126 (428)
..++.+.++...|..|.++...+++++.. .+++.+...+ .. . ...|++.+.++|+. -.+|.|...-.+
T Consensus 18 ~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~~i~~~~~~--~~-~-------~~~p~~~~~~~~~~~~i~f~g~p~g~e 86 (521)
T 1hyu_A 18 TKPVELIATLDDSAKSAEIKELLAEIAEL-SDKVTFKEDN--TL-P-------VRKPSFLITNPGSQQGPRFAGSPLGHE 86 (521)
T ss_dssp CSCEEEEEECCSSHHHHHHHHHHHHHHTT-CTTEEEEECT--TS-S-------SCSSEEEEECTTCCCSCEEESCCCGGG
T ss_pred CCCEEEEEEeCCCcchHHHHHHHHHHHHh-CCceEEEEcC--Cc-c-------cCCCEEEEecCCCcceEEEeccCcchh
Confidence 66777777888899999999999888764 5567764322 11 0 56799999877643 679999998889
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHH
Q 014216 127 IAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANN 206 (428)
Q Consensus 127 l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~ 206 (428)
+..|+...+.. ...-..++++.+...........++.|+++||++|+.+.+.+++++..
T Consensus 87 ~~s~~~~l~~~---------------------~~~~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~ 145 (521)
T 1hyu_A 87 FTSLVLALLWT---------------------GGHPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVL 145 (521)
T ss_dssp HHHHHHHHHHH---------------------TTCCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh---------------------cCCCCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhH
Confidence 99999877642 222345566655554322455778999999999999999999999998
Q ss_pred hcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 207 LKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 207 ~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
+. .+.+..+|.+..++++++|++.++|++++ +++ . ...|..+.++|..|+...
T Consensus 146 ~~-~v~~~~vd~~~~~~~~~~~~i~svPt~~i---~g~-~-~~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 146 NP-RIKHTAIDGGTFQNEITERNVMGVPAVFV---NGK-E-FGQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp CT-TEEEEEEETTTCHHHHHHTTCCSSSEEEE---TTE-E-EEESCCCHHHHHHHHCCS
T ss_pred cC-ceEEEEEechhhHHHHHHhCCCccCEEEE---CCE-E-EecCCCCHHHHHHHHhhc
Confidence 86 89999999999999999999999999977 332 2 245888999999987443
No 231
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.36 E-value=1.7e-12 Score=105.43 Aligned_cols=88 Identities=17% Similarity=0.191 Sum_probs=74.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcccHh-------------------------HHHHcCC
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANEHQS-------------------------LAQEYGI 100 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~~~~-------------------------l~~~~~v 100 (428)
++++++|.||++||++|+...|.+.++.+.++++ +.++.|+++...+ +++.|++
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 5789999999999999999999999999999875 9999999987766 9999999
Q ss_pred ccccEEEEE-eCCCCCccccCCCCcchHHHHHHHH
Q 014216 101 RGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 101 ~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
.++|+++++ ++|+.+.++.|..+.+.+.+.+.+.
T Consensus 110 ~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 110 YATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp CSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHH
Confidence 999999999 6777677777775555555555444
No 232
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.36 E-value=2.9e-12 Score=104.49 Aligned_cols=89 Identities=18% Similarity=0.306 Sum_probs=77.6
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc------------------------cHhHHHHcC--
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE------------------------HQSLAQEYG-- 99 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~------------------------~~~l~~~~~-- 99 (428)
++++++|.||++||++|+...|.+.++++.+.+ .+.++.|+++. ...+++.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 588999999999999999999999999999854 58899999863 346788899
Q ss_pred CccccEEEEE-eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 100 IRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 100 v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+.++|+++++ ++|+.+.++.|..+.+.+.++|.+..
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~ 139 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAH 139 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 9999999999 56777888999999999999998764
No 233
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.36 E-value=1.5e-12 Score=106.15 Aligned_cols=89 Identities=18% Similarity=0.339 Sum_probs=78.4
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc----------------------cHhHHHHcCCccc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------HQSLAQEYGIRGF 103 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~----------------------~~~l~~~~~v~~~ 103 (428)
++++++|.||++||++|+...|.+.++.+.+.+ .+.++.|+++. +..+++.|++.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 578999999999999999999999999999986 48888888865 3478999999999
Q ss_pred cEEEEE-eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 104 PTIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 104 P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
|+++++ .+|+.+..+.|..+.+.+.+++.+.+
T Consensus 105 P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll 137 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTMTESMIHDYMNLIK 137 (151)
T ss_dssp CEEEEECTTSEEEEEEESCCCHHHHHHHHHHHS
T ss_pred CeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 999999 67777778889999999999888765
No 234
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.36 E-value=3.4e-12 Score=104.14 Aligned_cols=89 Identities=18% Similarity=0.353 Sum_probs=79.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcccH-----------------------hHHHHcCCcc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANEHQ-----------------------SLAQEYGIRG 102 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~-----------------------~l~~~~~v~~ 102 (428)
++++++|.||++||++|+...+.+.++.+.+.+ .+.++.|+++... .++++|++.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 578999999999999999999999999999887 4899999988764 7899999999
Q ss_pred ccEEEEEe-CCCCCccccCCCCcchHHHHHHHHH
Q 014216 103 FPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 103 ~P~~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+|+++++. +|+.+.++.|..+.+.+.++|.+.+
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~ 142 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPSDPKTAEKFNELL 142 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHh
Confidence 99999996 7777778889899999999998775
No 235
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.35 E-value=2.2e-12 Score=96.80 Aligned_cols=98 Identities=14% Similarity=0.147 Sum_probs=79.4
Q ss_pred CcEEeCc-cchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchh----HhhhcCCC-cCc
Q 014216 161 ESIELNS-SNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKS----LMSKFNVQ-GFP 234 (428)
Q Consensus 161 ~v~~l~~-~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~----~~~~~~v~-~~P 234 (428)
....+++ +++.+. ++.+++++|.|++.||++|+.+.+.|+++++. .++.|+.||.++.++ ++.++||+ ..|
T Consensus 7 ~~~~i~s~e~f~~i-i~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sP 83 (112)
T 3iv4_A 7 VAIKLSSIDQFEQV-IEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHESP 83 (112)
T ss_dssp CEEECCSHHHHHHH-HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSS
T ss_pred ceeecCCHHHHHHH-HhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCCC
Confidence 4566655 555555 45688999999999999999999999999985 579999999998876 79999999 489
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHH
Q 014216 235 TILVFGADKDSPIPYEGARTAGAIESF 261 (428)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~f 261 (428)
++++|++|......-++..+.+.|...
T Consensus 84 q~il~k~G~~v~~~SH~~I~~~~l~~~ 110 (112)
T 3iv4_A 84 QAFYFVNGEMVWNRDHGDINVSSLAQA 110 (112)
T ss_dssp EEEEEETTEEEEEEEGGGCSHHHHHHH
T ss_pred eEEEEECCEEEEEeeccccCHHHHHHh
Confidence 999999765444445678888877654
No 236
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.35 E-value=1e-12 Score=108.34 Aligned_cols=96 Identities=13% Similarity=0.092 Sum_probs=73.8
Q ss_pred EeCccchHHHhh-cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcC---CccccEEEEE
Q 014216 34 QLTPNNFKSKVL-NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYG---IRGFPTIKVF 109 (428)
Q Consensus 34 ~l~~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~---v~~~P~~~~~ 109 (428)
.++++.+. .+. .++++++|.||++||++|+.+.|.+.+++..++ .+.|..||.+++++++++|+ +.++||++++
T Consensus 40 ~~~~~~~~-~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~ 117 (167)
T 1z6n_A 40 GLPSALTE-RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAEDDLRQRLALERIAIPLVLVL 117 (167)
T ss_dssp CCCHHHHH-HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEE
T ss_pred CCCHHHHH-HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEE
Confidence 34444444 333 247899999999999999999999999998875 58999999999999999997 9999999999
Q ss_pred eCC-CCCccccCCCCcchHHHHHHH
Q 014216 110 VPG-KPPVDYQGARDVKPIAEFALQ 133 (428)
Q Consensus 110 ~~g-~~~~~~~g~~~~~~l~~~i~~ 133 (428)
.+| +.+.++ |.. +..+...+.+
T Consensus 118 ~~~G~~~~~~-g~~-p~~~~~~i~~ 140 (167)
T 1z6n_A 118 DEEFNLLGRF-VER-PQAVLDGGPQ 140 (167)
T ss_dssp CTTCCEEEEE-ESS-CHHHHHHCHH
T ss_pred CCCCCEEEEE-cCC-CHHHHHhHHH
Confidence 886 444444 543 3444555544
No 237
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.35 E-value=1.2e-12 Score=98.47 Aligned_cols=77 Identities=14% Similarity=0.165 Sum_probs=68.7
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEeCCCCCccccCCCCcchHHH
Q 014216 50 VVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAE 129 (428)
Q Consensus 50 ~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~ 129 (428)
..++.||++||++|+++.+.+++++..++ +.+..+|++++++++.+|+++ +|+++++.+|+.+ ..|..+.+.|.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v--~~g~~~~~~L~~ 104 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL--CHYFLDSDVIGA 104 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE--ECSSCCCHHHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE--EecCCCHHHHHH
Confidence 67999999999999999999999998865 788999999999999999997 9999999988754 458888888888
Q ss_pred HH
Q 014216 130 FA 131 (428)
Q Consensus 130 ~i 131 (428)
||
T Consensus 105 ~L 106 (107)
T 2fgx_A 105 YL 106 (107)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 238
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.34 E-value=6.1e-12 Score=102.77 Aligned_cols=90 Identities=22% Similarity=0.344 Sum_probs=78.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcC-----------------------cccHhHHHHcCCcc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDA-----------------------NEHQSLAQEYGIRG 102 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~-----------------------~~~~~l~~~~~v~~ 102 (428)
++++++|.||++||++|+...+.+.++++.+++. +.++.|+. +.+..+++.|++.+
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 6889999999999999999999999999998863 77776653 44668999999999
Q ss_pred ccEEEEE-eCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 103 FPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 103 ~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
+|+++++ .+|+.+..+.|..+.+.+.++|.+.+.
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHH
T ss_pred cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 9999999 678778889999999999999988764
No 239
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.33 E-value=3.6e-12 Score=101.83 Aligned_cols=87 Identities=23% Similarity=0.369 Sum_probs=75.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcC----------------------------cccHhHHHHc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA----------------------------NEHQSLAQEY 98 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~----------------------------~~~~~l~~~~ 98 (428)
++++++|.||++||++|+...+.+.++.+.+++.+.++.+++ +.+..++++|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 588999999999999999999999999999877888888843 3355799999
Q ss_pred CCccccEEEEE-eCCCCCccccCCCCcchHHHHHHH
Q 014216 99 GIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQ 133 (428)
Q Consensus 99 ~v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~ 133 (428)
++.++|+++++ ++|+.+..+.|..+.+.+.+++.+
T Consensus 101 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 101 GVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp TCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred CcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 99999999999 677777888999999888888764
No 240
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.32 E-value=8.5e-12 Score=102.71 Aligned_cols=100 Identities=17% Similarity=0.226 Sum_probs=80.9
Q ss_pred eCccchHHHhhcCCCeEEEEEECCCChhhhh-hhHHHHHHHHHhcCc-eEEEEEcC------------------------
Q 014216 35 LTPNNFKSKVLNANGVVLVEFYAPWCGHCQA-LTPIWEKAATVLKGV-ATVAALDA------------------------ 88 (428)
Q Consensus 35 l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~-~~~~~~~~~~~~~~~-v~~~~vd~------------------------ 88 (428)
++.+.+...- -++++++|.||++||++|+. +.|.+.++++.++++ +.++.|++
T Consensus 18 ~~g~~~~l~~-~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (160)
T 3lor_A 18 VNHEGLSNED-LRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKF 96 (160)
T ss_dssp SSSCCCCHHH-HTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCS
T ss_pred cCCCccCHHH-hCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCC
Confidence 3444444222 25899999999999999999 599999999999874 88888886
Q ss_pred ----cccHh------HHHHcCCccccEEEEEe-CCCCCccccCCCCcchHHHHHHHHH
Q 014216 89 ----NEHQS------LAQEYGIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 89 ----~~~~~------l~~~~~v~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+.... ++++|++.++|+++++. +|+.+.++.|..+.+.+.++|.+.+
T Consensus 97 ~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 154 (160)
T 3lor_A 97 PVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLL 154 (160)
T ss_dssp CEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHH
T ss_pred cEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHH
Confidence 22333 89999999999999994 6777788889999999999988776
No 241
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.32 E-value=6.3e-13 Score=110.08 Aligned_cols=104 Identities=17% Similarity=0.223 Sum_probs=82.5
Q ss_pred CcEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC-ceEEEEEc----------------------
Q 014216 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALD---------------------- 87 (428)
Q Consensus 31 ~~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd---------------------- 87 (428)
.+..++.+.+. ....++++++|+||++||++|+.+.|.+.++++.++. .+.++.|+
T Consensus 22 ~l~~~~g~~~~-~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~ 100 (164)
T 2h30_A 22 TMKTADNRPAS-VYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNY 100 (164)
T ss_dssp TCEETTSSBGG-GGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCC
T ss_pred ccCCCCCCEee-HHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCC
Confidence 46677777666 3334678999999999999999999999999988643 34554443
Q ss_pred ------CcccHhHHHHcCCccccEEEEE-eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 88 ------ANEHQSLAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 88 ------~~~~~~l~~~~~v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
++.+..++++|++.++|+++++ ++|+.+.++.|..+.+.+.++|.+.+
T Consensus 101 ~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~ 155 (164)
T 2h30_A 101 PKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPN 155 (164)
T ss_dssp TTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTT
T ss_pred CcceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 3445689999999999999999 67777778889999999988887653
No 242
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.32 E-value=2e-11 Score=98.37 Aligned_cols=118 Identities=21% Similarity=0.265 Sum_probs=88.3
Q ss_pred CCCCcceecCchhhhhhhcCCCCeEEEEecCCccchhhhchhHHHHHHHHHHHHhhcCcceEEEecC--CCchhHHHHhC
Q 014216 270 VAPPEVTELTSQDVMEEKCGSAAICFVSFLPDILDSKAEGRNKYLEMLLSVAEKFKRGHYSFVWAAA--GKQPDLENRVG 347 (428)
Q Consensus 270 ~~~~~v~~l~~~~~~~~~~~~~~~~vi~f~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~f~~id~--~~~~~~~~~~g 347 (428)
.+.|.|.+++..+.........+..+++|... .....+.+++.++.+|++|+++ +.|+++|. ..+...+..||
T Consensus 11 ~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~----~~~~~~~~~~~~~~vAk~fkgk-i~Fv~vd~~~~~~~~~l~~fG 85 (147)
T 3bj5_A 11 NQLPLVIEFTEQTAPKIFGGEIKTHILLFLPK----SVSDYDGKLSNFKTAAESFKGK-ILFAFIDSDHTDNQRILEFFG 85 (147)
T ss_dssp ----CEEECCTTTHHHHHSSSCCEEEEEECCT----TSSSHHHHHHHHHHHHHTTTTT-CEEEEECTTCGGGHHHHHHTT
T ss_pred ccCCeeEEeccccHHHHhcCCCceEEEEEecC----CcHhHHHHHHHHHHHHHHcCCc-eEEEEEecchHhHHHHHHHcC
Confidence 35799999999887665544445555555432 1233678999999999999998 99999998 56667899999
Q ss_pred CCCCCCceEEEEec-cC-CccccCCCCCCHHHHHHHHHHHhcCCCCC
Q 014216 348 VGGYGYPALVALNV-KK-GVYTPLKSAFELEHIVEFVKEAGRGGKGN 392 (428)
Q Consensus 348 l~~~~~P~~~i~~~-~~-~~~~~~~~~~~~~~i~~fi~~~~~g~~~~ 392 (428)
++....|++++++. .. .+|....++++.+.|++|++++++|+...
T Consensus 86 l~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p 132 (147)
T 3bj5_A 86 LKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKP 132 (147)
T ss_dssp CCGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSCE
T ss_pred CCcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCccc
Confidence 99777999999986 33 34533347899999999999999997533
No 243
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.31 E-value=4.6e-12 Score=105.29 Aligned_cols=100 Identities=17% Similarity=0.264 Sum_probs=78.9
Q ss_pred CccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEc-----------------------CcccH
Q 014216 36 TPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALD-----------------------ANEHQ 92 (428)
Q Consensus 36 ~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd-----------------------~~~~~ 92 (428)
+...+....+.++++++|.||++||++|+.+.|.+.++++. .+.++.|+ ++.+.
T Consensus 39 ~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 115 (168)
T 2b1k_A 39 PGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDG 115 (168)
T ss_dssp TTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTC
T ss_pred CCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcch
Confidence 44444433334789999999999999999999999999886 36666666 45566
Q ss_pred hHHHHcCCccccEEEEE-eCCCCCccccCCCCcchHHHHHHHHHHHH
Q 014216 93 SLAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQIKAL 138 (428)
Q Consensus 93 ~l~~~~~v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~~~ 138 (428)
.++++|++.++|+++++ ++|+.+.++.|..+.+.+.+++.+.+...
T Consensus 116 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~ 162 (168)
T 2b1k_A 116 MLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWEKY 162 (168)
T ss_dssp HHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHHHH
T ss_pred HHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 89999999999976666 56776778889999999999998887654
No 244
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.30 E-value=1.1e-11 Score=101.90 Aligned_cols=89 Identities=16% Similarity=0.260 Sum_probs=76.3
Q ss_pred CCCeEEEEEECCCChhhhhh-hHHHHHHHHHhcC-ceEEEEEcCc----------------------------ccH----
Q 014216 47 ANGVVLVEFYAPWCGHCQAL-TPIWEKAATVLKG-VATVAALDAN----------------------------EHQ---- 92 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~-~~~~~~~~~~~~~-~v~~~~vd~~----------------------------~~~---- 92 (428)
++++++|.||++||++|+.. .|.+.++.+.+++ .+.++.|+++ ...
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 58999999999999999996 9999999999985 5888888863 122
Q ss_pred -hHHHHcCCccccEEEEE-eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 93 -SLAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 93 -~l~~~~~v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
.+++.|++.++|+++++ ++|+.+.++.|..+.+.+.+.|.+.+
T Consensus 107 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 151 (158)
T 3eyt_A 107 PRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLL 151 (158)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHh
Confidence 58999999999999999 56777778889999999998888775
No 245
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.30 E-value=2.2e-12 Score=93.65 Aligned_cols=73 Identities=15% Similarity=0.224 Sum_probs=62.5
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEeCCCCCccccCCCCcchHHHHH
Q 014216 52 LVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFA 131 (428)
Q Consensus 52 lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i 131 (428)
++.||++||++|+.+.|.+++++..+ +..||++++++++++||++ +|++++ .+|+.+. |..+.+.|.+++
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~---g~~~~~~L~~~l 72 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD---WPFDAPRLRAWL 72 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE---SCCCHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe---CCCCHHHHHHHH
Confidence 78999999999999999998876542 6789999999999999998 999887 7776542 888888999998
Q ss_pred HHH
Q 014216 132 LQQ 134 (428)
Q Consensus 132 ~~~ 134 (428)
.+.
T Consensus 73 ~~~ 75 (87)
T 1ttz_A 73 DAA 75 (87)
T ss_dssp HTC
T ss_pred HHH
Confidence 754
No 246
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.29 E-value=7.1e-12 Score=101.64 Aligned_cols=86 Identities=16% Similarity=0.257 Sum_probs=71.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHh-cCc-eEEEEEcCcc-------------------------cHhHHHHcC
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVL-KGV-ATVAALDANE-------------------------HQSLAQEYG 99 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~-~~~-v~~~~vd~~~-------------------------~~~l~~~~~ 99 (428)
++++++|.||++||++|+...|.+.++++.+ .+. +.++.|+++. +..++++|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 5789999999999999999999999999999 664 8899898876 448999999
Q ss_pred CccccEEEEE-eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 100 IRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 100 v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+.++|+++++ ++|+.+.++. +.+.+.+++.+.+
T Consensus 112 v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll 145 (148)
T 3fkf_A 112 ILTLPTNILLSPTGKILARDI---QGEALTGKLKELL 145 (148)
T ss_dssp CCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHC
T ss_pred CCCcCEEEEECCCCeEEEecC---CHHHHHHHHHHHH
Confidence 9999999999 5665444433 7777888887664
No 247
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.29 E-value=1.2e-11 Score=103.28 Aligned_cols=104 Identities=14% Similarity=0.184 Sum_probs=82.4
Q ss_pred EeCccchHHHHh---hcCCeEEEEEECCCChhHhhHHHHH---HHHHHHhcCCeEEEEEeCCCchhH-------------
Q 014216 164 ELNSSNFDELVL---KSKDLWIVEFFAPWCGHCKKLAPEW---KKAANNLKGKVKLGHVDCDSEKSL------------- 224 (428)
Q Consensus 164 ~l~~~~~~~~~~---~~~~~~~v~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~f~~v~~~~~~~~------------- 224 (428)
..+..++.+.+. ..+++++|.||++||++|+.+.+.+ .++.+.+.+++.|+.||++...++
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~ 109 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTER 109 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEE
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhh
Confidence 345556665543 4578999999999999999974444 566666665799999999877655
Q ss_pred -------------hhhcCCCcCcEEEEEcCCCCCcccccCCCC-HHHHHHHHHHHHh
Q 014216 225 -------------MSKFNVQGFPTILVFGADKDSPIPYEGART-AGAIESFALEQLE 267 (428)
Q Consensus 225 -------------~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~-~~~i~~fi~~~~~ 267 (428)
+++|++.++|+++++..+++....+.|..+ .+.+.+++.+.+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 110 TLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp EEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHH
Confidence 789999999999999767777777889988 9999999988764
No 248
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.29 E-value=1.8e-11 Score=99.76 Aligned_cols=89 Identities=25% Similarity=0.510 Sum_probs=75.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcccH----------------------hHHHHcCCccc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANEHQ----------------------SLAQEYGIRGF 103 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~~~----------------------~l~~~~~v~~~ 103 (428)
++++++|.||++||++|+...+.+.++.+.+.+. +.++.|+++.+. .+++.|++.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 5789999999999999999999999999999875 889999988655 68899999999
Q ss_pred cEEEEE-eCCCCCccccCCCCc--chHHHHHHHHH
Q 014216 104 PTIKVF-VPGKPPVDYQGARDV--KPIAEFALQQI 135 (428)
Q Consensus 104 P~~~~~-~~g~~~~~~~g~~~~--~~l~~~i~~~l 135 (428)
|+++++ .+|+.+.++.|.... +.+.++|.+.+
T Consensus 107 P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 107 PTSFLIDRNGKVLLQHVGFRPADKEALEQQILAAL 141 (152)
T ss_dssp SEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHT
T ss_pred CeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHH
Confidence 999888 677767778886544 68888887664
No 249
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.28 E-value=1.4e-11 Score=100.53 Aligned_cols=86 Identities=22% Similarity=0.330 Sum_probs=72.7
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcc-------------------------cHhHHHHcCC
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANE-------------------------HQSLAQEYGI 100 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~-------------------------~~~l~~~~~v 100 (428)
++++++|.||++||++|+...|.+.++.+.++++ +.++.|+++. +..++++|++
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 5789999999999999999999999999999875 8999999986 5789999999
Q ss_pred ccccEEEEE-eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 101 RGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 101 ~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
.++|+++++ ++|+.+.++ .+.+.+.++|.+.+
T Consensus 108 ~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~l~ 140 (152)
T 2lrn_A 108 VGFPHIILVDPEGKIVAKE---LRGDDLYNTVEKFV 140 (152)
T ss_dssp CSSCEEEEECTTSEEEEEC---CCTTHHHHHHHHHH
T ss_pred CcCCeEEEECCCCeEEEee---CCHHHHHHHHHHHH
Confidence 999999999 566654444 35567777777664
No 250
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.28 E-value=6.3e-12 Score=102.82 Aligned_cols=85 Identities=19% Similarity=0.305 Sum_probs=76.0
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcC---------------------------cccHhHHHHcCCc
Q 014216 49 GVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA---------------------------NEHQSLAQEYGIR 101 (428)
Q Consensus 49 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~---------------------------~~~~~l~~~~~v~ 101 (428)
++++|.||++||++|+...|.+.++++.+ .+.++.|++ +....++++|++.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVL 108 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCC
Confidence 89999999999999999999999999999 578888888 3667899999999
Q ss_pred cccEEEEE-eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 102 GFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 102 ~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
++|+++++ ++|+.+..+.|..+.+.+.++|.+..
T Consensus 109 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~ 143 (154)
T 3ia1_A 109 GQPWTFVVDREGKVVALFAGRAGREALLDALLLAG 143 (154)
T ss_dssp SSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTT
T ss_pred cccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhcc
Confidence 99998888 67777788899999999999998763
No 251
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.28 E-value=7.9e-12 Score=102.41 Aligned_cols=89 Identities=19% Similarity=0.361 Sum_probs=74.6
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcC-----------------------cccHhHHHHcCCccc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA-----------------------NEHQSLAQEYGIRGF 103 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~-----------------------~~~~~l~~~~~v~~~ 103 (428)
.+++++|.||++||++|+.+.|.+.++++. +++.++.|++ +.+..++++|++.++
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 118 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGV 118 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCcc
Confidence 488999999999999999999999998876 5577777775 345578999999999
Q ss_pred cEEEEE-eCCCCCccccCCCCcchHHHHHHHHHHH
Q 014216 104 PTIKVF-VPGKPPVDYQGARDVKPIAEFALQQIKA 137 (428)
Q Consensus 104 P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~~ 137 (428)
|+++++ .+|+.+.++.|..+.+.+.+++.+.++.
T Consensus 119 P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 153 (156)
T 1kng_A 119 PETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEK 153 (156)
T ss_dssp CEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHHH
T ss_pred CeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 987777 6777677889999999999999887643
No 252
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.26 E-value=1.9e-11 Score=103.15 Aligned_cols=90 Identities=20% Similarity=0.408 Sum_probs=76.6
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-e------EEEEEcCcc-cHhHHHHc--------------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-A------TVAALDANE-HQSLAQEY-------------------- 98 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v------~~~~vd~~~-~~~l~~~~-------------------- 98 (428)
+++++||.||++||++|+...|.+.++++.++++ + .|+.|+++. .++.+++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 5789999999999999999999999999998865 7 999999988 66666665
Q ss_pred -----CCccccEEEEE-eCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 99 -----GIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 99 -----~v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
++.++|+++++ ++|+.+.++.|..+.+.+.++|.+.+.
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 68999987777 567767788999999999999988763
No 253
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.25 E-value=1.2e-10 Score=102.83 Aligned_cols=148 Identities=13% Similarity=0.184 Sum_probs=99.7
Q ss_pred CCCeEEEEEE-CCCChhhh-hhhHHHHHHHHHhcC-ce-EEEEEcCcc----------------------cHhHHHHcCC
Q 014216 47 ANGVVLVEFY-APWCGHCQ-ALTPIWEKAATVLKG-VA-TVAALDANE----------------------HQSLAQEYGI 100 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~-~~~~~~~~~~~~~~~-~v-~~~~vd~~~----------------------~~~l~~~~~v 100 (428)
++++++|.|| +.||++|. ...|.+.+++.++++ .+ .++.|+.+. +..+++.||+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 111 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGM 111 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCc
Confidence 5789999999 99999999 999999999988864 47 777777652 1256777777
Q ss_pred c-----------cccEEEEEeCCCCCccccCCCCc------chHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcE
Q 014216 101 R-----------GFPTIKVFVPGKPPVDYQGARDV------KPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESI 163 (428)
Q Consensus 101 ~-----------~~P~~~~~~~g~~~~~~~g~~~~------~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 163 (428)
. ..|+.+++++|+....+.|.... ....+.+... ...
T Consensus 112 ~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l-----------------------~~~--- 165 (241)
T 1nm3_A 112 LVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYL-----------------------APQ--- 165 (241)
T ss_dssp EEECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHHHH-----------------------CTT---
T ss_pred eeecccccCcccceeEEEEEECCEEEEEEEeccCCCccceecCHHHHHHHh-----------------------hhh---
Confidence 5 34776666777655555554322 2333333322 000
Q ss_pred EeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCc---hhHhhhcCCCcCcEEEE
Q 014216 164 ELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSE---KSLMSKFNVQGFPTILV 238 (428)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~---~~~~~~~~v~~~P~i~~ 238 (428)
. .....++.|..+||+.|+.....+++. .+.|-.+|.+.+ +++.+.+|..++|.+++
T Consensus 166 ----------~--i~~~~i~ly~~~~Cp~C~~a~~~L~~~------~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~~ 225 (241)
T 1nm3_A 166 ----------H--QVQESISIFTKPGCPFCAKAKQLLHDK------GLSFEEIILGHDATIVSVRAVSGRTTVPQVFI 225 (241)
T ss_dssp ----------S--CCCCCEEEEECSSCHHHHHHHHHHHHH------TCCCEEEETTTTCCHHHHHHHTCCSSSCEEEE
T ss_pred ----------c--cccceEEEEECCCChHHHHHHHHHHHc------CCceEEEECCCchHHHHHHHHhCCCCcCEEEE
Confidence 0 123457788999999999998888763 244555665544 35777889999998864
No 254
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.23 E-value=3.2e-11 Score=99.87 Aligned_cols=86 Identities=17% Similarity=0.374 Sum_probs=72.9
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCc------------------ccH----------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN------------------EHQ---------------- 92 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~------------------~~~---------------- 92 (428)
+++++||.||++||++|+...|.+.++.+.++ .+.|+.|+++ ...
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 57999999999999999999999999999998 7899999987 342
Q ss_pred ------hHHHHcCCccccEEEEEe-CCCCCccccCCC-CcchHHHHHHHHH
Q 014216 93 ------SLAQEYGIRGFPTIKVFV-PGKPPVDYQGAR-DVKPIAEFALQQI 135 (428)
Q Consensus 93 ------~l~~~~~v~~~P~~~~~~-~g~~~~~~~g~~-~~~~l~~~i~~~l 135 (428)
.+++.|++.++|+++++. +|+. .. .|.. +.+.+.++|.+.+
T Consensus 115 ~~~d~~~~~~~~~v~~~P~~~lid~~G~i-~~-~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVRSIDYIVIMDKSSNV-LY-AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp EEECCSHHHHHTTCCSSSEEEEEETTCCE-EE-EEESCCHHHHHHHHHHC-
T ss_pred EEeChHHHHHHhCCCCceEEEEEcCCCcE-EE-eCCCCCHHHHHHHHHHHh
Confidence 789999999999999995 5543 33 7888 8888888887653
No 255
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.86 E-value=9.7e-13 Score=104.42 Aligned_cols=94 Identities=15% Similarity=0.205 Sum_probs=79.7
Q ss_pred hcCCeEEEEEECCCChhHhhHHHHH---HHHHHHhcCCeEEEEEeCC--CchhHhhhcCCCcCcEEEEEcC-CCCC--cc
Q 014216 176 KSKDLWIVEFFAPWCGHCKKLAPEW---KKAANNLKGKVKLGHVDCD--SEKSLMSKFNVQGFPTILVFGA-DKDS--PI 247 (428)
Q Consensus 176 ~~~~~~~v~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~f~~v~~~--~~~~~~~~~~v~~~P~i~~~~~-~~~~--~~ 247 (428)
..+++++|.||++||++|+.+.+.+ .++++.+.+.+.++.||++ ....++++|+|.++|++++|.. ++.. ..
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~ 96 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEVG 96 (130)
Confidence 4567899999999999999999999 9999988888999999984 5578999999999999999953 3444 56
Q ss_pred cccCCCCHHHHHHHHHHHHhhc
Q 014216 248 PYEGARTAGAIESFALEQLETN 269 (428)
Q Consensus 248 ~y~g~~~~~~i~~fi~~~~~~~ 269 (428)
.+.|..+.+.+..++.+.+...
T Consensus 97 ~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 97 RLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 7889889999999988876543
No 256
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.22 E-value=4.2e-11 Score=97.66 Aligned_cols=81 Identities=10% Similarity=0.129 Sum_probs=69.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcccHh-----------------------HHHHcCCcc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANEHQS-----------------------LAQEYGIRG 102 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~~~~-----------------------l~~~~~v~~ 102 (428)
++++++|.||++||++|+...|.+.+++++++++ +.++.|+++...+ ++++|++.+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN 113 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc
Confidence 4789999999999999999999999999999875 8999999986653 889999999
Q ss_pred ccEEEEE-eCCCCCccccCCCCcchH
Q 014216 103 FPTIKVF-VPGKPPVDYQGARDVKPI 127 (428)
Q Consensus 103 ~P~~~~~-~~g~~~~~~~g~~~~~~l 127 (428)
+|+++++ ++|+.+.++.|..+.+..
T Consensus 114 ~P~~~lid~~G~i~~~~~g~~~~e~~ 139 (152)
T 2lrt_A 114 LPSVFLVNRNNELSARGENIKDLDEA 139 (152)
T ss_dssp CSEEEEEETTTEEEEETTTCSCHHHH
T ss_pred CceEEEECCCCeEEEecCCHHHHHHH
Confidence 9999999 567767777777665443
No 257
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.22 E-value=4.7e-11 Score=97.53 Aligned_cols=89 Identities=24% Similarity=0.444 Sum_probs=74.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCccc-----------------------HhHHHHcCCcc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANEH-----------------------QSLAQEYGIRG 102 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~-----------------------~~l~~~~~v~~ 102 (428)
++++++|.||++||++|+...+.+.++.+.+.+ .+.++.|+++.+ ..+++.|++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 578999999999999999999999999999987 688888888865 34889999999
Q ss_pred ccEEEEE-eCCCCCccccCCC--CcchHHHHHHHHH
Q 014216 103 FPTIKVF-VPGKPPVDYQGAR--DVKPIAEFALQQI 135 (428)
Q Consensus 103 ~P~~~~~-~~g~~~~~~~g~~--~~~~l~~~i~~~l 135 (428)
+|+++++ ++|+.+.++.|.. +.+.+.++|.+..
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~ 142 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNEL 142 (154)
T ss_dssp BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC-
T ss_pred CCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHH
Confidence 9987777 5677677788876 5668888887653
No 258
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.21 E-value=4.6e-11 Score=97.62 Aligned_cols=90 Identities=19% Similarity=0.311 Sum_probs=76.8
Q ss_pred hcCCeEEEEEE-CCCChhHhhHHHHH---HHHHHHhcCCeEEEEEeCCCch-----------hHhhhcCCCcCcEEEEEc
Q 014216 176 KSKDLWIVEFF-APWCGHCKKLAPEW---KKAANNLKGKVKLGHVDCDSEK-----------SLMSKFNVQGFPTILVFG 240 (428)
Q Consensus 176 ~~~~~~~v~f~-~~~c~~c~~~~~~~---~~~a~~~~~~~~f~~v~~~~~~-----------~~~~~~~v~~~P~i~~~~ 240 (428)
..+++++|.|| ++||++|+.+.+.+ .++++.+...+.++.+|++... .++++|+|.++|+++++.
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~d 124 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFID 124 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEEC
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEEc
Confidence 34789999999 99999999999999 7887776667999999987653 899999999999999997
Q ss_pred CCCCCcccccCCC--CHHHHHHHHHHHH
Q 014216 241 ADKDSPIPYEGAR--TAGAIESFALEQL 266 (428)
Q Consensus 241 ~~~~~~~~y~g~~--~~~~i~~fi~~~~ 266 (428)
.++.....+ |.. +.+.+.+++.+.+
T Consensus 125 ~~G~~~~~~-G~~~~~~~~l~~~l~~~l 151 (154)
T 2ju5_A 125 AEGKQLARM-GFEPGGGAAYVSKVKSAL 151 (154)
T ss_dssp TTCCEEEEE-CCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEe-cCCCCCHHHHHHHHHHHH
Confidence 666666667 877 8999999988765
No 259
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.21 E-value=1.4e-10 Score=93.87 Aligned_cols=104 Identities=17% Similarity=0.233 Sum_probs=85.7
Q ss_pred EEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC-----------------------
Q 014216 163 IELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD----------------------- 219 (428)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~----------------------- 219 (428)
..++...+.... ..+++++|.||++||++|+...+.+.++++.+.+++.|+.|+++
T Consensus 15 ~~~~g~~~~~~~-~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (148)
T 2b5x_A 15 AWLNGEVTREQL-IGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQP 93 (148)
T ss_dssp EEESCCCCHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSC
T ss_pred ccccCcccchhh-cCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcc
Confidence 455665555433 35678999999999999999999999999999888999999853
Q ss_pred ----CchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 220 ----SEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 220 ----~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
.+..++++|++.++|+++++..++.....+.|..+.+.+.+++.+.+.
T Consensus 94 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 94 IFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp EEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred eEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 356899999999999999997667666677888899999999987763
No 260
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.20 E-value=9.1e-11 Score=93.52 Aligned_cols=88 Identities=18% Similarity=0.339 Sum_probs=77.4
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCC----------------------chhHhhhcCCCcCc
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDS----------------------EKSLMSKFNVQGFP 234 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~----------------------~~~~~~~~~v~~~P 234 (428)
.+++++|.||++||++|+...+.+.++++.+. .+.|+.|+++. ...++++|++.++|
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P 101 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQP 101 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCC
Confidence 46789999999999999999999999999998 89999999877 57899999999999
Q ss_pred EEEEEcCCCCCccccc---CCCCHHHHHHHHHHHH
Q 014216 235 TILVFGADKDSPIPYE---GARTAGAIESFALEQL 266 (428)
Q Consensus 235 ~i~~~~~~~~~~~~y~---g~~~~~~i~~fi~~~~ 266 (428)
+++++..++... .+. |..+.+.|.+++.+.+
T Consensus 102 ~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 102 AFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp EEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred EEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 999997666555 788 9899999999987653
No 261
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.20 E-value=1.1e-10 Score=94.84 Aligned_cols=87 Identities=13% Similarity=0.204 Sum_probs=72.4
Q ss_pred CCCeEEEEEECCCChh--hhhhhHHHHHHHHHh-cCc-eEEEEEcCcccH-------------------------hHHHH
Q 014216 47 ANGVVLVEFYAPWCGH--CQALTPIWEKAATVL-KGV-ATVAALDANEHQ-------------------------SLAQE 97 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~--C~~~~~~~~~~~~~~-~~~-v~~~~vd~~~~~-------------------------~l~~~ 97 (428)
++++++|.||++||++ |+...|.+.++.+.+ +++ +.++.|+++..+ .+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 4789999999999999 999999999999999 654 889999888654 78999
Q ss_pred cCCccccEEEEE-eCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 98 YGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 98 ~~v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
|++.++|+++++ ++|+.+.++ .+.+.+.+.|.+.++
T Consensus 112 ~~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 112 YSIYKIPANILLSSDGKILAKN---LRGEELKKKIENIVE 148 (150)
T ss_dssp TTCCSSSEEEEECTTSBEEEES---CCHHHHHHHHHHHHH
T ss_pred cCCCccCeEEEECCCCEEEEcc---CCHHHHHHHHHHHHh
Confidence 999999999999 566654444 277778888877654
No 262
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.20 E-value=4.7e-11 Score=98.09 Aligned_cols=86 Identities=21% Similarity=0.432 Sum_probs=71.9
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhc-CceEEEEEcCcc-------------------cHhHHHHcCCccccEE
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLK-GVATVAALDANE-------------------HQSLAQEYGIRGFPTI 106 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-~~v~~~~vd~~~-------------------~~~l~~~~~v~~~P~~ 106 (428)
++++++|.||++||++|+...+.+.++++.++ ..+.++.|+++. +..++++|++.++|++
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 119 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDT 119 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceE
Confidence 57899999999999999999999999999998 468999999987 6789999999999998
Q ss_pred EEE-eCCCCCccccCCCCc--chHHHHHH
Q 014216 107 KVF-VPGKPPVDYQGARDV--KPIAEFAL 132 (428)
Q Consensus 107 ~~~-~~g~~~~~~~g~~~~--~~l~~~i~ 132 (428)
+++ ++|+...++.|..+. +++.+.+.
T Consensus 120 ~lid~~G~i~~~~~G~~~~~~~~~~~~~~ 148 (158)
T 3hdc_A 120 FIVDRKGIIRQRVTGGIEWDAPKVVSYLK 148 (158)
T ss_dssp EEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred EEEcCCCCEEEEEeCCCccchHHHHHHHH
Confidence 888 667667788886653 34444443
No 263
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.19 E-value=1.1e-11 Score=94.14 Aligned_cols=73 Identities=19% Similarity=0.457 Sum_probs=61.6
Q ss_pred CCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC------CchhHhhhcCCCcCcEEEEEcCCCCCcccccC
Q 014216 178 KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD------SEKSLMSKFNVQGFPTILVFGADKDSPIPYEG 251 (428)
Q Consensus 178 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~------~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g 251 (428)
.++.+|.||++||++|+.+.+.|.++++.+. .|+++ .+.+++++|+|+++|++++ ++. .|.|
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i---~G~---~~~G 79 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII---NGR---TYTG 79 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE---TTE---EEES
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcCCeEeCEEEE---CCE---EecC
Confidence 4567899999999999999999999997765 45666 5678999999999999877 232 4889
Q ss_pred CCCHHHHHHHH
Q 014216 252 ARTAGAIESFA 262 (428)
Q Consensus 252 ~~~~~~i~~fi 262 (428)
..+.+.|.+|+
T Consensus 80 ~~~~~~l~~~~ 90 (106)
T 3kp8_A 80 VRSLEALAVAS 90 (106)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHh
Confidence 99999999886
No 264
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.19 E-value=7.5e-11 Score=95.17 Aligned_cols=83 Identities=19% Similarity=0.259 Sum_probs=66.4
Q ss_pred cEEeCccchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhc--CceEEEEEcCccc------------------
Q 014216 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK--GVATVAALDANEH------------------ 91 (428)
Q Consensus 32 ~~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~--~~v~~~~vd~~~~------------------ 91 (428)
+..++.+.+.... .++++++|+||++||++|+.+.|.+.++++.++ +.+.++.|+++..
T Consensus 13 l~~~~g~~~~l~~-~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 91 (144)
T 1i5g_A 13 VLKGAAADIALPS-LAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPF 91 (144)
T ss_dssp EEETTEEEEEGGG-GTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCT
T ss_pred EEcCCCCEecHHH-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCcccccc
Confidence 4455555544222 257899999999999999999999999999998 4688888888752
Q ss_pred ------HhHHHHcCCccccEEEEEe--CCCCC
Q 014216 92 ------QSLAQEYGIRGFPTIKVFV--PGKPP 115 (428)
Q Consensus 92 ------~~l~~~~~v~~~P~~~~~~--~g~~~ 115 (428)
..++++|++.++|+++++. +|+.+
T Consensus 92 ~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~ 123 (144)
T 1i5g_A 92 EDRKGMEFLTTGFDVKSIPTLVGVEADSGNII 123 (144)
T ss_dssp TCHHHHHHHHHHTTCCSSSEEEEEETTTCCEE
T ss_pred CchHHHHHHHHHcCCCCCCEEEEEECCCCcEE
Confidence 5799999999999999996 56543
No 265
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.18 E-value=7.1e-11 Score=98.85 Aligned_cols=89 Identities=19% Similarity=0.315 Sum_probs=74.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcC-----------------------cccHhHHHHcCCccc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA-----------------------NEHQSLAQEYGIRGF 103 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~-----------------------~~~~~l~~~~~v~~~ 103 (428)
.+++++|.||++||++|+...|.+.++.++ .+.++.|++ +.+..+++.|++.++
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 133 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGA 133 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCC
Confidence 478999999999999999999999999887 367777774 345578899999999
Q ss_pred cEEEEE-eCCCCCccccCCCCcchHHHHHHHHHHHH
Q 014216 104 PTIKVF-VPGKPPVDYQGARDVKPIAEFALQQIKAL 138 (428)
Q Consensus 104 P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~~~ 138 (428)
|+++++ ++|+.+.++.|..+.+.+.++|.+.++..
T Consensus 134 P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~l 169 (176)
T 3kh7_A 134 PETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQQL 169 (176)
T ss_dssp CEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHHHH
T ss_pred CeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 988888 56776778889999999999998887643
No 266
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.18 E-value=3.5e-11 Score=91.61 Aligned_cols=87 Identities=15% Similarity=0.141 Sum_probs=69.3
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-----eEEEEEeCCCc--hhHhhhcCCCcCcEEEEEcCCCCCcccc
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-----VKLGHVDCDSE--KSLMSKFNVQGFPTILVFGADKDSPIPY 249 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-----~~f~~v~~~~~--~~~~~~~~v~~~P~i~~~~~~~~~~~~y 249 (428)
+...++|.||++||++|+.+.+. ++..+... +.+..||.+.+ ..++.+++|.++||+++|+ ++++..+.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~---i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~-~G~ev~Ri 92 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAE---IAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMA-GDVESGRL 92 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHH---TTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEE-TTEEEEEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHH---HHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEE-CCEEEeee
Confidence 34689999999999999999753 33334332 67788887765 5799999999999999999 55567788
Q ss_pred cCCCCHHHHHHHHHHHHh
Q 014216 250 EGARTAGAIESFALEQLE 267 (428)
Q Consensus 250 ~g~~~~~~i~~fi~~~~~ 267 (428)
.|....+.+..|+.+.+.
T Consensus 93 ~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 93 EGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp ECCCCHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHh
Confidence 999999999999987764
No 267
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.18 E-value=8e-11 Score=100.40 Aligned_cols=101 Identities=14% Similarity=0.126 Sum_probs=78.7
Q ss_pred eCccchHHHhhcCCC-eEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCc-----------------------
Q 014216 35 LTPNNFKSKVLNANG-VVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDAN----------------------- 89 (428)
Q Consensus 35 l~~~~~~~~~~~~~~-~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~----------------------- 89 (428)
++.+.+...-+ .++ ++||.||++||++|+...|.+.++.+++.++ +.++.|+++
T Consensus 33 ~~G~~~~l~~~-~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~ 111 (196)
T 2ywi_A 33 IDGNVVRLEDV-KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYP 111 (196)
T ss_dssp TTCCEEEHHHH-CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCC
T ss_pred CCCCEEeHHHh-CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCC
Confidence 33444442223 355 6999999999999999999999999999864 888888883
Q ss_pred ------ccHhHHHHcCCccccEEEEE-eCCCCCcc---------ccCCCCcchHHHHHHHHHH
Q 014216 90 ------EHQSLAQEYGIRGFPTIKVF-VPGKPPVD---------YQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 90 ------~~~~l~~~~~v~~~P~~~~~-~~g~~~~~---------~~g~~~~~~l~~~i~~~l~ 136 (428)
.+..++++|++.++|+++++ ++|+.+.+ +.|..+.+.+.+.|.+.+.
T Consensus 112 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 112 FPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp SCEEECSSCHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred ceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHc
Confidence 35578999999999999999 46665544 4577788899888887753
No 268
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.17 E-value=5.4e-11 Score=95.75 Aligned_cols=85 Identities=19% Similarity=0.375 Sum_probs=67.6
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHH---HHHHhcC-ceEEEEEcCcccHhH------------------------HHHc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEK---AATVLKG-VATVAALDANEHQSL------------------------AQEY 98 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~---~~~~~~~-~v~~~~vd~~~~~~l------------------------~~~~ 98 (428)
++++++|.||++||++|+...|.+.+ +.+.+++ .+.++.|+++...+. ++.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 58899999999999999999999988 8888765 488999988865543 3489
Q ss_pred CCccccEEEEEe-CCCCCccccCCCCcchHHHHHHHH
Q 014216 99 GIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 99 ~v~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
++.++|+++++. +|+. .+ +..+.+.+.+++.+.
T Consensus 106 ~v~~~P~~~lid~~G~i--~~-~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKRV--IL-KDTSMEQLIDYLATQ 139 (142)
T ss_dssp CCCSSSEEEEECTTCBE--EE-CSCCHHHHHHHHHC-
T ss_pred CCCCCCeEEEECCCCCE--Ee-cCCCHHHHHHHHHHH
Confidence 999999999995 5543 22 557788888888754
No 269
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.17 E-value=8.1e-11 Score=95.24 Aligned_cols=69 Identities=22% Similarity=0.326 Sum_probs=60.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhc--CceEEEEEcCcc------------------------cHhHHHHcCC
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLK--GVATVAALDANE------------------------HQSLAQEYGI 100 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~--~~v~~~~vd~~~------------------------~~~l~~~~~v 100 (428)
++++++|+||++||++|+.+.|.+.++++.++ +.+.++.|+++. +..++++|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 57899999999999999999999999999998 468888888875 3579999999
Q ss_pred ccccEEEEEe--CCCCC
Q 014216 101 RGFPTIKVFV--PGKPP 115 (428)
Q Consensus 101 ~~~P~~~~~~--~g~~~ 115 (428)
.++|+++++. +|+.+
T Consensus 107 ~~~Pt~~lid~~~G~i~ 123 (146)
T 1o8x_A 107 ESIPTLIGVDADSGDVV 123 (146)
T ss_dssp CSSSEEEEEETTTCCEE
T ss_pred CCCCEEEEEECCCCeEE
Confidence 9999999997 56543
No 270
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.16 E-value=1.9e-10 Score=91.51 Aligned_cols=88 Identities=18% Similarity=0.268 Sum_probs=77.2
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCC-----------------------chhHhhhcCCCcC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDS-----------------------EKSLMSKFNVQGF 233 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~-----------------------~~~~~~~~~v~~~ 233 (428)
.+++++|.||++||++|+...+.+.++++.+. .+.|+.|+++. +..++++|++.++
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~ 102 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQ 102 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCC
Confidence 46789999999999999999999999999998 89999999843 4678999999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
|+++++..++... .+.|..+.+++.+++.+.+
T Consensus 103 P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 103 PAYAFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp SEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred ceEEEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 9999997666555 7899999999999987764
No 271
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.16 E-value=4.3e-11 Score=98.84 Aligned_cols=93 Identities=19% Similarity=0.254 Sum_probs=75.9
Q ss_pred hcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchh-HhhhcCC--CcCcEEEEEcCCCCCcccccCC
Q 014216 176 KSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKS-LMSKFNV--QGFPTILVFGADKDSPIPYEGA 252 (428)
Q Consensus 176 ~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~-~~~~~~v--~~~P~i~~~~~~~~~~~~y~g~ 252 (428)
..+++++|.||++||++|+.+.+.|.++++.+...+.|+.|+++.++. ++.+|++ ..+|++++|..++.....+.|.
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~ 123 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEIINE 123 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCT
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEEEEeCC
Confidence 467899999999999999999999999887765567788888877766 8888988 6699999996555555666774
Q ss_pred ----------CCHHHHHHHHHHHHhh
Q 014216 253 ----------RTAGAIESFALEQLET 268 (428)
Q Consensus 253 ----------~~~~~i~~fi~~~~~~ 268 (428)
.+.+.|..++.+.+..
T Consensus 124 ~~~~~~~~~~~~~~~l~~~l~~~l~~ 149 (164)
T 1sen_A 124 NGNPSYKYFYVSAEQVVQGMKEAQER 149 (164)
T ss_dssp TSCTTSTTCCCSHHHHHHHHHHHHHH
T ss_pred CCccchhcccCCHHHHHHHHHHHHHh
Confidence 7889999998887643
No 272
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.16 E-value=1.5e-10 Score=93.47 Aligned_cols=91 Identities=16% Similarity=0.212 Sum_probs=73.4
Q ss_pred hcCCCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCceEEEEEcCcc--cHhHHHHcCCccccEEEEEeC--CCCCcc
Q 014216 45 LNANGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDANE--HQSLAQEYGIRGFPTIKVFVP--GKPPVD 117 (428)
Q Consensus 45 ~~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~P~~~~~~~--g~~~~~ 117 (428)
.+++++++|+||++||..|+.+.... .+++..++..+.++.+|.+. ...+.++|++.++|+++++.. |+.+..
T Consensus 39 k~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~ 118 (153)
T 2dlx_A 39 QMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVE 118 (153)
T ss_dssp HHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEE
T ss_pred HHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeee
Confidence 44699999999999999999998765 55666665568888888864 457899999999999999954 556666
Q ss_pred ccCCCCcchHHHHHHHHHH
Q 014216 118 YQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 118 ~~g~~~~~~l~~~i~~~l~ 136 (428)
+.| .+++.+..+|.+.+.
T Consensus 119 ~~g-~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 119 WHQ-LDVSSFLDQVTGFLG 136 (153)
T ss_dssp ESS-CCHHHHHHHHHHHHH
T ss_pred cCC-CCHHHHHHHHHHHHH
Confidence 666 899999988887764
No 273
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.15 E-value=9.1e-11 Score=83.48 Aligned_cols=74 Identities=15% Similarity=0.311 Sum_probs=62.9
Q ss_pred EEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCCC-CHHHHH
Q 014216 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGAR-TAGAIE 259 (428)
Q Consensus 181 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~-~~~~i~ 259 (428)
..|.||++||++|+.+.+.++++++.+...+.++.+| +.+++++|++.++|++++ +++ .... |.. +.++|.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~~~---~G~-~~~~-G~~~~~~~l~ 73 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGLAV---DGE-LKIM-GRVASKEEIK 73 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCEEE---TTE-EEEC-SSCCCHHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEEEE---CCE-EEEc-CCCCCHHHHH
Confidence 3588999999999999999999999998889999997 788999999999999998 332 3333 887 888888
Q ss_pred HHH
Q 014216 260 SFA 262 (428)
Q Consensus 260 ~fi 262 (428)
+++
T Consensus 74 ~~l 76 (77)
T 1ilo_A 74 KIL 76 (77)
T ss_dssp HHC
T ss_pred HHh
Confidence 774
No 274
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.15 E-value=1.2e-10 Score=107.73 Aligned_cols=91 Identities=21% Similarity=0.226 Sum_probs=79.3
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc---------------------------cHhHHHHc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE---------------------------HQSLAQEY 98 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~---------------------------~~~l~~~~ 98 (428)
+++++||.||++||++|+...|.+.++++++++ .+.++.|+++. +..++++|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 478999999999999999999999999999986 58898888742 35789999
Q ss_pred CCccccEEEEE-eCCCCCccccCCCCcchHHHHHHHHHHH
Q 014216 99 GIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQIKA 137 (428)
Q Consensus 99 ~v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~~ 137 (428)
++.++|+++++ ++|+.+..+.|..+.+.+.++|.+.+..
T Consensus 161 gV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~e 200 (352)
T 2hyx_A 161 RNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLND 200 (352)
T ss_dssp TCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHHH
T ss_pred CCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 99999999998 6777777889999999999999887753
No 275
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.14 E-value=1.7e-10 Score=95.39 Aligned_cols=68 Identities=21% Similarity=0.419 Sum_probs=60.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC--ceEEEEEcCccc------------------------HhHHHHcCC
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG--VATVAALDANEH------------------------QSLAQEYGI 100 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~v~~~~vd~~~~------------------------~~l~~~~~v 100 (428)
+++++||+||++||++|+++.|.+.++++.+++ .+.++.|+++.. ..++++|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 578999999999999999999999999999985 688888888765 689999999
Q ss_pred ccccEEEEEeC--CCC
Q 014216 101 RGFPTIKVFVP--GKP 114 (428)
Q Consensus 101 ~~~P~~~~~~~--g~~ 114 (428)
.++|+++++.. |+.
T Consensus 127 ~~~Pt~~lid~~~G~i 142 (165)
T 3s9f_A 127 ESIPTLIGLNADTGDT 142 (165)
T ss_dssp CSSSEEEEEETTTCCE
T ss_pred CCCCEEEEEeCCCCEE
Confidence 99999999974 554
No 276
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.14 E-value=1.9e-10 Score=97.39 Aligned_cols=89 Identities=13% Similarity=0.140 Sum_probs=72.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcC-----------------------------cccHhHHHH
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA-----------------------------NEHQSLAQE 97 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~-----------------------------~~~~~l~~~ 97 (428)
.++++||.||++||++|+...|.+.++.+++.+++.++.|++ +.+..+++.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 478999999999999999999999999999987788888888 335578999
Q ss_pred cCCccccEEEEE-eCCCCCcc--------ccCCCCcchHHHHHHHHH
Q 014216 98 YGIRGFPTIKVF-VPGKPPVD--------YQGARDVKPIAEFALQQI 135 (428)
Q Consensus 98 ~~v~~~P~~~~~-~~g~~~~~--------~~g~~~~~~l~~~i~~~l 135 (428)
|++.++|+++++ ++|+.+.+ +.|..+.+.+.+.|.+.+
T Consensus 112 ~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll 158 (188)
T 2cvb_A 112 YRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALL 158 (188)
T ss_dssp TTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHH
T ss_pred cCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHH
Confidence 999999999999 45654333 223346788888887765
No 277
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.14 E-value=2.1e-10 Score=92.48 Aligned_cols=86 Identities=22% Similarity=0.427 Sum_probs=76.1
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhc-CCeEEEEEeCCC-------------------------chhHhhhcCC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK-GKVKLGHVDCDS-------------------------EKSLMSKFNV 230 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~-~~~~f~~v~~~~-------------------------~~~~~~~~~v 230 (428)
.+++++|.||++||++|+...+.+.++++.+. ..+.|+.|+++. +..++++|++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 56799999999999999999999999999998 569999998854 5689999999
Q ss_pred CcCcEEEEEcCCCCCcccccCCCCHHHHHHHH
Q 014216 231 QGFPTILVFGADKDSPIPYEGARTAGAIESFA 262 (428)
Q Consensus 231 ~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi 262 (428)
..+|+++++..++.....+.|..+.+.+.+++
T Consensus 113 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 113 ITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred CccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 99999999977776667888999999988876
No 278
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.13 E-value=1.6e-10 Score=93.20 Aligned_cols=68 Identities=22% Similarity=0.455 Sum_probs=59.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhc--CceEEEEEcCcc------------------------cHhHHHHcCC
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLK--GVATVAALDANE------------------------HQSLAQEYGI 100 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~--~~v~~~~vd~~~------------------------~~~l~~~~~v 100 (428)
++++++|.||++||++|+.+.|.+.++++.++ +.+.++.|+++. +..++++|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 57899999999999999999999999999988 468888888875 3478999999
Q ss_pred ccccEEEEEe--CCCC
Q 014216 101 RGFPTIKVFV--PGKP 114 (428)
Q Consensus 101 ~~~P~~~~~~--~g~~ 114 (428)
.++|+++++. +|+.
T Consensus 107 ~~~Pt~~lid~~~G~i 122 (144)
T 1o73_A 107 ESIPTLITINADTGAI 122 (144)
T ss_dssp CSSSEEEEEETTTCCE
T ss_pred CCCCEEEEEECCCCeE
Confidence 9999999998 5654
No 279
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.13 E-value=1.1e-10 Score=94.05 Aligned_cols=83 Identities=12% Similarity=0.201 Sum_probs=65.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHH---HHHHhcC-ceEEEEEcCcccHh------------------------HHHHc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEK---AATVLKG-VATVAALDANEHQS------------------------LAQEY 98 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~---~~~~~~~-~v~~~~vd~~~~~~------------------------l~~~~ 98 (428)
.+++++|.||++||++|+...|.+.+ +.+.+++ .+.++.|+.+...+ +++.|
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 46999999999999999999999999 8988864 58888898886633 47789
Q ss_pred CCccccEEEEEe-CCCCCccccCCCCcchHHHHHH
Q 014216 99 GIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFAL 132 (428)
Q Consensus 99 ~v~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~i~ 132 (428)
++.++|+++++. +|+.+.+. .+.+.+.++|.
T Consensus 110 ~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~ 141 (142)
T 3eur_A 110 DLRAIPTLYLLDKNKTVLLKD---ATLQKVEQYLA 141 (142)
T ss_dssp CCTTCSEEEEECTTCBEEEEE---ECHHHHHHHHH
T ss_pred CCCcCCeEEEECCCCcEEecC---CCHHHHHHHHh
Confidence 999999999995 45433333 24566666664
No 280
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.13 E-value=3.5e-10 Score=95.52 Aligned_cols=89 Identities=18% Similarity=0.355 Sum_probs=74.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhc-CceEEEEEcCccc-----HhHHHHcCCc-------------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLK-GVATVAALDANEH-----QSLAQEYGIR------------------- 101 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~-~~v~~~~vd~~~~-----~~l~~~~~v~------------------- 101 (428)
++++++|.||++||++|+...+.+.++.+.++ ..+.++.|+++.. ..+++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 57899999999999999999999999999998 4688888888754 5677777774
Q ss_pred ----cccEEEEE-eCCCCCccccCCCC--cchHHHHHHHHH
Q 014216 102 ----GFPTIKVF-VPGKPPVDYQGARD--VKPIAEFALQQI 135 (428)
Q Consensus 102 ----~~P~~~~~-~~g~~~~~~~g~~~--~~~l~~~i~~~l 135 (428)
++|+++++ ++|+.+.++.|..+ .+.+.++|.+.+
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll 179 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAAT 179 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHh
Confidence 89999999 56776777888765 678888888775
No 281
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.11 E-value=5.6e-10 Score=92.16 Aligned_cols=92 Identities=18% Similarity=0.428 Sum_probs=80.5
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCCchhHhhhc---------------------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDSEKSLMSKF--------------------------- 228 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~~~~~~~~~--------------------------- 228 (428)
.+++++|.||++||++|+...+.+.++++.+.+. +.|+.|+++.+.+.++++
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 4679999999999999999999999999999875 999999998877766666
Q ss_pred CCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhh
Q 014216 229 NVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLET 268 (428)
Q Consensus 229 ~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (428)
++..+|+++++..++.....+.|..+.+.+.+++.+.+..
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC-
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 8999999999977776667788999999999999888743
No 282
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.11 E-value=6e-10 Score=90.60 Aligned_cols=91 Identities=20% Similarity=0.334 Sum_probs=78.7
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCC------------------------chhHhhhcC--
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS------------------------EKSLMSKFN-- 229 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~------------------------~~~~~~~~~-- 229 (428)
.+++++|.||++||++|+...+.+.++++.+.+ .+.|+.|+++. ...+++.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 467999999999999999999999999999955 59999999863 345778899
Q ss_pred CCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
+..+|+++++..++.....+.|..+.+.+.+++.+...
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHT
T ss_pred cCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999998777777888999999999999877753
No 283
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.10 E-value=3.5e-10 Score=91.99 Aligned_cols=91 Identities=18% Similarity=0.364 Sum_probs=79.1
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCC----------------------chhHhhhcCCCcC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS----------------------EKSLMSKFNVQGF 233 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~----------------------~~~~~~~~~v~~~ 233 (428)
.+++++|.||++||++|+...+.+.++++.+.+ .+.|+.|+++. +..+++.|++.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 467899999999999999999999999999977 59999998865 3478999999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
|+++++..++.....+.|..+.+.|.+++...+.
T Consensus 105 P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~ 138 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKP 138 (151)
T ss_dssp CEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred CeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHh
Confidence 9999997677666777899999999999988753
No 284
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.09 E-value=5.2e-10 Score=91.00 Aligned_cols=93 Identities=18% Similarity=0.416 Sum_probs=80.8
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCCch-----------------------hHhhhcCCCc
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSEK-----------------------SLMSKFNVQG 232 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~~-----------------------~~~~~~~v~~ 232 (428)
.+++++|.|+++||+.|+...+.+.++++.+.+ .+.|+.|+++... .+++.|++..
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 467899999999999999999999999999987 4999999987764 7889999999
Q ss_pred CcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhhc
Q 014216 233 FPTILVFGADKDSPIPYEGARTAGAIESFALEQLETN 269 (428)
Q Consensus 233 ~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~ 269 (428)
+|+++++..++.....+.|..+.+.|..++.+.....
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred CCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 9999999877766677788889999999998886543
No 285
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.09 E-value=4.4e-11 Score=106.68 Aligned_cols=71 Identities=24% Similarity=0.449 Sum_probs=59.5
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCc------ccHhHHHHcCCccccEEEEEeCCCCCccccCCCCc
Q 014216 51 VLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN------EHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDV 124 (428)
Q Consensus 51 ~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~------~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~~~ 124 (428)
.+|+||++||++|+++.|.|++++++++ .+||+ +++++|++++|+++||+++ +|+ .|.|.++.
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~---~~~G~~~~ 268 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR---TYTGVRSL 268 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTE---EEESCCCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcCCcccCeEEE--CCE---EecCCCCH
Confidence 4799999999999999999999987653 34444 3789999999999999654 775 49999999
Q ss_pred chHHHHHH
Q 014216 125 KPIAEFAL 132 (428)
Q Consensus 125 ~~l~~~i~ 132 (428)
+++.+|+.
T Consensus 269 ~~L~~~l~ 276 (291)
T 3kp9_A 269 EALAVASG 276 (291)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHC
Confidence 99999885
No 286
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.08 E-value=1.5e-10 Score=95.26 Aligned_cols=96 Identities=14% Similarity=0.126 Sum_probs=71.7
Q ss_pred eCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcC---CCcCcEEEEEcC
Q 014216 165 LNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFN---VQGFPTILVFGA 241 (428)
Q Consensus 165 l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~---v~~~P~i~~~~~ 241 (428)
++++.+.......+++++|.||++||++|+...|.+.++++.+. .+.|..|+.+.+++++++|+ +.++|+++++++
T Consensus 41 ~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~ 119 (167)
T 1z6n_A 41 LPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAEDDLRQRLALERIAIPLVLVLDE 119 (167)
T ss_dssp CCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECT
T ss_pred CCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECC
Confidence 44444443221245789999999999999999999999999875 69999999888889999997 999999999987
Q ss_pred CCCCcccccCCCCHHHHHHHHH
Q 014216 242 DKDSPIPYEGARTAGAIESFAL 263 (428)
Q Consensus 242 ~~~~~~~y~g~~~~~~i~~fi~ 263 (428)
++.....+ |.. +..+...+.
T Consensus 120 ~G~~~~~~-g~~-p~~~~~~i~ 139 (167)
T 1z6n_A 120 EFNLLGRF-VER-PQAVLDGGP 139 (167)
T ss_dssp TCCEEEEE-ESS-CHHHHHHCH
T ss_pred CCCEEEEE-cCC-CHHHHHhHH
Confidence 65543344 543 344444443
No 287
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.07 E-value=2.6e-10 Score=85.61 Aligned_cols=77 Identities=14% Similarity=0.259 Sum_probs=66.9
Q ss_pred eEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHH
Q 014216 180 LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIE 259 (428)
Q Consensus 180 ~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~ 259 (428)
..++.|+++||+.|+.+.+.++++++.+. +.|..+|.+.+++++++|+++ +|++++|.++. .+ ..|..+.+.|.
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~--~v-~~g~~~~~~L~ 103 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDK--EL-CHYFLDSDVIG 103 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTE--EE-ECSSCCCHHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHHHHHHhCCC-CceEEEEECCE--EE-EecCCCHHHHH
Confidence 57899999999999999999999999875 889999999999999999997 99999987443 22 45888889988
Q ss_pred HHH
Q 014216 260 SFA 262 (428)
Q Consensus 260 ~fi 262 (428)
+|+
T Consensus 104 ~~L 106 (107)
T 2fgx_A 104 AYL 106 (107)
T ss_dssp HHH
T ss_pred HHh
Confidence 876
No 288
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.07 E-value=4.6e-10 Score=91.60 Aligned_cols=89 Identities=20% Similarity=0.318 Sum_probs=78.9
Q ss_pred CeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeC---------------------------CCchhHhhhcCCC
Q 014216 179 DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC---------------------------DSEKSLMSKFNVQ 231 (428)
Q Consensus 179 ~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~---------------------------~~~~~~~~~~~v~ 231 (428)
++++|.||++||+.|+...+.+.++++.+ .+.|+.|++ +....++++|++.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVL 108 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCC
Confidence 78999999999999999999999999999 788888888 3667899999999
Q ss_pred cCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhhc
Q 014216 232 GFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETN 269 (428)
Q Consensus 232 ~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~ 269 (428)
.+|+++++..++.....+.|..+.+++.+++.++....
T Consensus 109 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 109 GQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp SSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred cccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 99999999777766778889999999999998886433
No 289
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.06 E-value=1.1e-09 Score=88.94 Aligned_cols=94 Identities=22% Similarity=0.425 Sum_probs=77.6
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCCch----------------------hHhhhcCCCcC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDSEK----------------------SLMSKFNVQGF 233 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~~~----------------------~~~~~~~v~~~ 233 (428)
.+++++|.||++||+.|....+.+.++++.+.+. +.++.|+++.+. .+++.|++..+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 4679999999999999999999999999999875 999999987655 67888999999
Q ss_pred cEEEEEcCCCCCcccccCC--CCHHHHHHHHHHHHhhcC
Q 014216 234 PTILVFGADKDSPIPYEGA--RTAGAIESFALEQLETNV 270 (428)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~--~~~~~i~~fi~~~~~~~~ 270 (428)
|+++++..++.....+.|. .+.+.|.+++.+.+....
T Consensus 107 P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~~ 145 (152)
T 3gl3_A 107 PTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGNE 145 (152)
T ss_dssp SEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC---
T ss_pred CeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcccc
Confidence 9999997677666667774 355899999998875444
No 290
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.06 E-value=1.5e-09 Score=88.32 Aligned_cols=93 Identities=23% Similarity=0.363 Sum_probs=79.7
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeC-----------------------CCchhHhhhcCCCc
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDC-----------------------DSEKSLMSKFNVQG 232 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~-----------------------~~~~~~~~~~~v~~ 232 (428)
.+++++|.|+++||++|+...+.+.++++.+.+. +.+..|+. +....+++.|++..
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 4679999999999999999999999999999874 88876653 34567999999999
Q ss_pred CcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhhc
Q 014216 233 FPTILVFGADKDSPIPYEGARTAGAIESFALEQLETN 269 (428)
Q Consensus 233 ~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~ 269 (428)
+|+++++..++.....|.|..+.+.|.+++.+.+...
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 143 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNS 143 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHCC
T ss_pred cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence 9999999777776777899999999999998887543
No 291
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.06 E-value=7.5e-10 Score=89.31 Aligned_cols=91 Identities=13% Similarity=0.046 Sum_probs=65.2
Q ss_pred hhcCCeEEEEEECCCChhHhhHHHHHHHHH---HHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCcccccC
Q 014216 175 LKSKDLWIVEFFAPWCGHCKKLAPEWKKAA---NNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEG 251 (428)
Q Consensus 175 ~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a---~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g 251 (428)
...+++++|.||++||++|+.+.+.+.+.. +.....+..+.+| .+..+++.++++.++|++++|+.+++...+..|
T Consensus 41 ~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD-~e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G 119 (151)
T 3ph9_A 41 QKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLM-HETTDKNLSPDGQYVPRIMFVDPSLTVRADIAG 119 (151)
T ss_dssp HHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEES-SCCSCGGGCTTCCCSSEEEEECTTSCBCTTCCC
T ss_pred HHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEec-CCchhhHhhcCCCCCCEEEEECCCCCEEEEEeC
Confidence 346889999999999999999999987643 3322234444443 234567889999999999999866666667777
Q ss_pred C-------C---CHHHHHHHHHHHH
Q 014216 252 A-------R---TAGAIESFALEQL 266 (428)
Q Consensus 252 ~-------~---~~~~i~~fi~~~~ 266 (428)
. + +.+.+.+.+.+.+
T Consensus 120 ~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 120 RYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp SCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred CcCCcccccchhhHHHHHHHHHHHH
Confidence 6 3 4455666666665
No 292
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.06 E-value=7.3e-11 Score=91.42 Aligned_cols=84 Identities=19% Similarity=0.344 Sum_probs=63.1
Q ss_pred HhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCccc-----HhHHHHcCCccccEEEEEeCCCCCcc
Q 014216 43 KVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEH-----QSLAQEYGIRGFPTIKVFVPGKPPVD 117 (428)
Q Consensus 43 ~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~-----~~l~~~~~v~~~P~~~~~~~g~~~~~ 117 (428)
.+.. ++++++ ||++||++|+.+.|.|.++.. .+.++.+|.+.. ..+++++++.++|++ |.+|+.+..
T Consensus 15 ~~~~-~~~vv~-f~a~~C~~C~~~~~~l~~~~~----~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~v~~ 86 (116)
T 2e7p_A 15 ELAS-SAPVVV-FSKTYCGYCNRVKQLLTQVGA----SYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQIGG 86 (116)
T ss_dssp HHHT-SSSEEE-EECTTCHHHHHHHHHHHHHTC----CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEEEC
T ss_pred HHHc-CCCEEE-EECCCChhHHHHHHHHHHcCC----CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEEECC
Confidence 4443 455555 999999999999999988754 356677776665 579999999999998 557877666
Q ss_pred ccCCC---CcchHHHHHHHH
Q 014216 118 YQGAR---DVKPIAEFALQQ 134 (428)
Q Consensus 118 ~~g~~---~~~~l~~~i~~~ 134 (428)
+.|.. +.+.|.+++.+.
T Consensus 87 ~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 87 CDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHHHHHHHTTCHHHHHHHT
T ss_pred hHHHHHHHhCChHHHHHHHc
Confidence 66655 677788888653
No 293
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.05 E-value=4.6e-10 Score=90.80 Aligned_cols=90 Identities=14% Similarity=0.236 Sum_probs=76.9
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCCchh-------------------------HhhhcCC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDSEKS-------------------------LMSKFNV 230 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~~~~-------------------------~~~~~~v 230 (428)
.+++++|.||++||++|+...+.+.++++.+.+. +.|+.|+++.+.+ +++.|++
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 4679999999999999999999999999999876 9999999987766 8999999
Q ss_pred CcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 231 QGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 231 ~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
..+|+++++..++.....+.|..+.+.+.+.+.+.+
T Consensus 110 ~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 110 YATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp CSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHHh
Confidence 999999999777766677777766777777666554
No 294
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.04 E-value=1.1e-09 Score=87.12 Aligned_cols=88 Identities=19% Similarity=0.296 Sum_probs=75.9
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeC----------------------------CCchhHhhhc
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC----------------------------DSEKSLMSKF 228 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~----------------------------~~~~~~~~~~ 228 (428)
.+++++|.||++||++|+...+.+.++++.+...+.+..|++ +.+..++++|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 467899999999999999999999999999887899988843 3345789999
Q ss_pred CCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHH
Q 014216 229 NVQGFPTILVFGADKDSPIPYEGARTAGAIESFALE 264 (428)
Q Consensus 229 ~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 264 (428)
++.++|+++++.+++.....+.|..+.+++.+++.+
T Consensus 101 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 101 GVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp TCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred CcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 999999999997777767788899999999888754
No 295
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.04 E-value=9.9e-10 Score=95.20 Aligned_cols=101 Identities=20% Similarity=0.257 Sum_probs=73.9
Q ss_pred cEEeCccchHHHhhcCCC-eEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCc--------------------
Q 014216 32 VVQLTPNNFKSKVLNANG-VVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDAN-------------------- 89 (428)
Q Consensus 32 ~~~l~~~~~~~~~~~~~~-~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~-------------------- 89 (428)
+..++.+.+...-+ .++ ++||.||++||++|+...|.+.+++++++++ +.++.|+++
T Consensus 43 l~~~~G~~v~l~~~-~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~ 121 (218)
T 3u5r_E 43 LPDAGGNLFTLAEF-KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAY 121 (218)
T ss_dssp EECTTCCEECGGGG-TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHH
T ss_pred eECCCCCEEeHHHh-CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHh
Confidence 34444444442222 355 5999999999999999999999999999875 889999883
Q ss_pred ---------ccHhHHHHcCCccccEEEEE-eCCCCCccccCC-----------CCcchHHHHHHHHH
Q 014216 90 ---------EHQSLAQEYGIRGFPTIKVF-VPGKPPVDYQGA-----------RDVKPIAEFALQQI 135 (428)
Q Consensus 90 ---------~~~~l~~~~~v~~~P~~~~~-~~g~~~~~~~g~-----------~~~~~l~~~i~~~l 135 (428)
....+++.|++.++|+++++ ++|+. .|.|. .+.+.|.+.|.+.+
T Consensus 122 ~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i--~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll 186 (218)
T 3u5r_E 122 GYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRL--VYHGQFDDARPGNGKDVTGADLRAAVDAVL 186 (218)
T ss_dssp TCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBE--EEEECSSSCCTTSCCCCCCHHHHHHHHHHH
T ss_pred CCCccEEECCccHHHHHcCCCCCCeEEEECCCCcE--EEeccccccccccccccCHHHHHHHHHHHH
Confidence 35689999999999999999 45543 34432 34566666666554
No 296
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.03 E-value=1.2e-09 Score=89.57 Aligned_cols=91 Identities=16% Similarity=0.212 Sum_probs=78.2
Q ss_pred cCCeEEEEEECCCChhHhh-HHHHHHHHHHHhcCC-eEEEEEeCC----------------------------Cchh---
Q 014216 177 SKDLWIVEFFAPWCGHCKK-LAPEWKKAANNLKGK-VKLGHVDCD----------------------------SEKS--- 223 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~-~~~~~~~~a~~~~~~-~~f~~v~~~----------------------------~~~~--- 223 (428)
.+++++|.||++||++|+. ..+.+.++++.+.++ +.|..|+++ ....
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 4679999999999999999 699999999999875 999998752 2233
Q ss_pred ---HhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 224 ---LMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 224 ---~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
++++|++..+|+++++.+++.....+.|..+.+.+.+.+.+.+.
T Consensus 109 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 109 IPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHT
T ss_pred hhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHh
Confidence 88999999999999998777777777899999999999988764
No 297
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.02 E-value=1.2e-09 Score=90.82 Aligned_cols=91 Identities=14% Similarity=0.157 Sum_probs=75.5
Q ss_pred CCCeEEEEEECCCChh-hhhhhHHHHHHHHHhc-----CceEEEEEcCccc----------------------------H
Q 014216 47 ANGVVLVEFYAPWCGH-CQALTPIWEKAATVLK-----GVATVAALDANEH----------------------------Q 92 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~-C~~~~~~~~~~~~~~~-----~~v~~~~vd~~~~----------------------------~ 92 (428)
.++++||.||++||++ |+...|.+.++.+.++ ..+.++.|+++.. .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4789999999999998 9999999999999985 3688888887621 2
Q ss_pred hHHHHcCCcccc---------------EEEEE-eCCCCCccccCCCCcchHHHHHHHHHHH
Q 014216 93 SLAQEYGIRGFP---------------TIKVF-VPGKPPVDYQGARDVKPIAEFALQQIKA 137 (428)
Q Consensus 93 ~l~~~~~v~~~P---------------~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~~ 137 (428)
.+++.|++...| +++++ ++|+.+..+.|..+.+.+.+.|.+.++.
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 165 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMAA 165 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 588899999888 77777 6677777888989999999999887643
No 298
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.02 E-value=5.8e-10 Score=89.80 Aligned_cols=82 Identities=12% Similarity=0.141 Sum_probs=64.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcccH--------------------------hHHHHcC
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANEHQ--------------------------SLAQEYG 99 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~--------------------------~l~~~~~ 99 (428)
++++++|.||++||++|+...|.+.++.+.+++ .+.++.|+++.+. .+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 578999999999999999999999999999985 4888888877432 5778999
Q ss_pred CccccEEEEEe-CCCCCccccCCCCcchHHHHH
Q 014216 100 IRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFA 131 (428)
Q Consensus 100 v~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~i 131 (428)
+.++|+.+++. +|+.+.+. .+.+.+.+.+
T Consensus 111 v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l 140 (143)
T 4fo5_A 111 LRKGFKNFLINDEGVIIAAN---VTPEKLTEIL 140 (143)
T ss_dssp GGGCCCEEEECTTSBEEEES---CCHHHHHHHH
T ss_pred CCCCCcEEEECCCCEEEEcc---CCHHHHHHHH
Confidence 99999998886 56544333 2345555544
No 299
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.01 E-value=2.3e-09 Score=88.15 Aligned_cols=90 Identities=16% Similarity=0.186 Sum_probs=69.7
Q ss_pred CCCe-EEEEEE-CCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCc---------------------ccHhHHHHcCCcc
Q 014216 47 ANGV-VLVEFY-APWCGHCQALTPIWEKAATVLKGV-ATVAALDAN---------------------EHQSLAQEYGIRG 102 (428)
Q Consensus 47 ~~~~-~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~---------------------~~~~l~~~~~v~~ 102 (428)
.+++ ++|.|| ++||++|+...|.+.++.++++++ +.++.|+++ ....+++.|++.+
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKG 106 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCC
Confidence 4565 999999 999999999999999999999864 888888887 4568899999999
Q ss_pred ----ccEEEEE-eCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 103 ----FPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 103 ----~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
+|+++++ ++|+....+.|....+...+-+.+.++
T Consensus 107 ~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~ 145 (161)
T 3drn_A 107 FILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALK 145 (161)
T ss_dssp SSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHH
T ss_pred cCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHH
Confidence 9999999 467766777784444333333333333
No 300
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.01 E-value=2.8e-10 Score=93.93 Aligned_cols=105 Identities=17% Similarity=0.259 Sum_probs=81.3
Q ss_pred CcEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcC-CeEEEEEe----------------------
Q 014216 161 ESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVD---------------------- 217 (428)
Q Consensus 161 ~v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~---------------------- 217 (428)
.+..++.+.+.... ..+++++|.||++||++|+...+.+.++++.+.. .+.|..|+
T Consensus 22 ~l~~~~g~~~~~~~-~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~ 100 (164)
T 2h30_A 22 TMKTADNRPASVYL-KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNY 100 (164)
T ss_dssp TCEETTSSBGGGGC-CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCC
T ss_pred ccCCCCCCEeeHHH-hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCC
Confidence 45666665554332 3467899999999999999999999999998743 35554444
Q ss_pred ------CCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 218 ------CDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 218 ------~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
++.+..++++|++..+|+++++..++.....+.|..+.+++..++.+.+
T Consensus 101 ~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~ 155 (164)
T 2h30_A 101 PKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPN 155 (164)
T ss_dssp TTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTT
T ss_pred CcceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 3345678999999999999999767766677789999999999987764
No 301
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=99.01 E-value=2.3e-10 Score=82.04 Aligned_cols=61 Identities=18% Similarity=0.311 Sum_probs=51.1
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCc-ccHhHHHHcCCccccEEEEEeCCC
Q 014216 51 VLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN-EHQSLAQEYGIRGFPTIKVFVPGK 113 (428)
Q Consensus 51 ~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~-~~~~l~~~~~v~~~P~~~~~~~g~ 113 (428)
-++.||++||++|+++.+.+++++..++..+.++.+|.+ +..++++++|++++|++++ +|+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCE
Confidence 378899999999999999999988776655667777765 5788999999999999876 665
No 302
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.00 E-value=8.9e-10 Score=90.85 Aligned_cols=89 Identities=12% Similarity=0.126 Sum_probs=73.6
Q ss_pred CCCeEEEEEECCCChh-hhhhhHHHHHHHHHhcC-----ceEEEEEcCccc----------------------------H
Q 014216 47 ANGVVLVEFYAPWCGH-CQALTPIWEKAATVLKG-----VATVAALDANEH----------------------------Q 92 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~-C~~~~~~~~~~~~~~~~-----~v~~~~vd~~~~----------------------------~ 92 (428)
.+++++|.||++||++ |+...|.+.++.+.+++ ++.++.|+++.. .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4789999999999998 99999999999998863 678888877642 2
Q ss_pred hHHHHcCCcccc---------------EEEEE-eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 93 SLAQEYGIRGFP---------------TIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 93 ~l~~~~~v~~~P---------------~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
.+++.|++...| +++++ ++|+.+..+.|..+.+.+.+.|.+.+
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHM 160 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 488899999999 66666 56777778888888888888887765
No 303
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.99 E-value=1.9e-09 Score=88.82 Aligned_cols=82 Identities=13% Similarity=0.228 Sum_probs=67.4
Q ss_pred cEEeCccchHHHHhhcCCeEEEEEECCCChhHhhHHH-HH--HHHHHHhcCCeEEEEEeCCCchhHhhhc--------CC
Q 014216 162 SIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAP-EW--KKAANNLKGKVKLGHVDCDSEKSLMSKF--------NV 230 (428)
Q Consensus 162 v~~l~~~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~-~~--~~~a~~~~~~~~f~~v~~~~~~~~~~~~--------~v 230 (428)
......+.+.... ..+++++|.|+++||++|+.+.+ .| .++++.+.+.+.++.||.++.+++.+.| |+
T Consensus 24 W~~~~~ea~~~A~-~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv 102 (173)
T 3ira_A 24 WYPWGEEAFEKAR-KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGR 102 (173)
T ss_dssp CBCSSHHHHHHHH-HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCcCHHHHHHHH-HhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCC
Confidence 3444556666553 56889999999999999999988 44 5778888778999999999989998888 99
Q ss_pred CcCcEEEEEcCCCC
Q 014216 231 QGFPTILVFGADKD 244 (428)
Q Consensus 231 ~~~P~i~~~~~~~~ 244 (428)
.++|++++++++++
T Consensus 103 ~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 103 GGWPLNIIMTPGKK 116 (173)
T ss_dssp CCSSEEEEECTTSC
T ss_pred CCCcceeeECCCCC
Confidence 99999999986553
No 304
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.99 E-value=2e-09 Score=88.15 Aligned_cols=91 Identities=16% Similarity=0.207 Sum_probs=77.6
Q ss_pred cCCeEEEEEECCCChhHhhH-HHHHHHHHHHhcC-CeEEEEEeCC----------------------------Cch----
Q 014216 177 SKDLWIVEFFAPWCGHCKKL-APEWKKAANNLKG-KVKLGHVDCD----------------------------SEK---- 222 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~-~~~~~~~a~~~~~-~~~f~~v~~~----------------------------~~~---- 222 (428)
..++++|.||++||++|+.. .+.+.++++.+.+ .+.|..|+++ ...
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 46799999999999999995 9999999999985 5999988853 112
Q ss_pred -hHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 223 -SLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 223 -~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
.+++.|++..+|+++++..++.....+.|..+.+.+.+.+.+.+.
T Consensus 107 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 107 PRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhc
Confidence 588999999999999997777666778899999999999988764
No 305
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.98 E-value=3.3e-09 Score=86.24 Aligned_cols=88 Identities=19% Similarity=0.339 Sum_probs=72.9
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCC-------------------------chhHhhhcCC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS-------------------------EKSLMSKFNV 230 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~-------------------------~~~~~~~~~v 230 (428)
.+++++|.||++||++|+...+.+.++++.+.+. +.++.|+++. ...+++.|++
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 4678999999999999999999999999999875 9999999887 4678999999
Q ss_pred CcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 231 QGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 231 ~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
..+|+++++..++.....+ .+.+++.+++.+.+.
T Consensus 108 ~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 108 VGFPHIILVDPEGKIVAKE---LRGDDLYNTVEKFVN 141 (152)
T ss_dssp CSSCEEEEECTTSEEEEEC---CCTTHHHHHHHHHHT
T ss_pred CcCCeEEEECCCCeEEEee---CCHHHHHHHHHHHHh
Confidence 9999999997665433333 356788888877654
No 306
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.97 E-value=2.9e-09 Score=89.58 Aligned_cols=91 Identities=13% Similarity=0.336 Sum_probs=76.6
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-e------EEEEEeCCC-chhHhhhc--------------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-V------KLGHVDCDS-EKSLMSKF-------------------- 228 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~------~f~~v~~~~-~~~~~~~~-------------------- 228 (428)
..++++|.||++||++|+...+.+.++++.+.++ + .|+.|+++. +.+.+++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 4679999999999999999999999999999775 7 999999987 56555555
Q ss_pred -----CCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 229 -----NVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 229 -----~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
++..+|+++++.+++.....+.|..+.++|..++.+.+.
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 678899999997777666778899999999999987753
No 307
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.97 E-value=5.1e-10 Score=83.86 Aligned_cols=79 Identities=13% Similarity=0.155 Sum_probs=63.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCc--ccHhHHHHcCCccccEEEEEeCCCCCccccCCCCc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN--EHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDV 124 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~~~ 124 (428)
.+.+.+++|+++||++|+++.+.+.+++. .+.|..+|++ ++++++++|| .++|++ +.+|+.+ ..|..+.
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~----~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~--~~~g~~~ 84 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKD----RFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL--MMHRVNT 84 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSS----SSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE--EESSCCH
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhh----CCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE--EecCCCH
Confidence 35678999999999999999999987643 3889999998 7899999999 999986 4577642 3455777
Q ss_pred chHHHHHHHH
Q 014216 125 KPIAEFALQQ 134 (428)
Q Consensus 125 ~~l~~~i~~~ 134 (428)
+.|.++|.+.
T Consensus 85 ~~l~~~l~~~ 94 (100)
T 1wjk_A 85 SKLEKQLRKL 94 (100)
T ss_dssp HHHHHHHHSS
T ss_pred HHHHHHHHHH
Confidence 8888887644
No 308
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.96 E-value=1.5e-09 Score=90.01 Aligned_cols=89 Identities=13% Similarity=0.228 Sum_probs=72.9
Q ss_pred hcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeC-----------------------CCchhHhhhcCCCc
Q 014216 176 KSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC-----------------------DSEKSLMSKFNVQG 232 (428)
Q Consensus 176 ~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~-----------------------~~~~~~~~~~~v~~ 232 (428)
..+++++|.||++||++|+...+.+.++++. .+.++.|++ +.+..++++|++..
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 125 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYG 125 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCS
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccc
Confidence 3577899999999999999999999999886 567777763 34557889999999
Q ss_pred CcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 233 FPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 233 ~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
+|+++++..++.....+.|..+.+.+..++.+.+.
T Consensus 126 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 126 APETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp SSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHH
T ss_pred cCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 99888887666666677898999999988877653
No 309
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.96 E-value=2.3e-09 Score=86.63 Aligned_cols=87 Identities=16% Similarity=0.295 Sum_probs=72.2
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHh-cCC-eEEEEEeCCCc-------------------------hhHhhhcC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNL-KGK-VKLGHVDCDSE-------------------------KSLMSKFN 229 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~-~~~-~~f~~v~~~~~-------------------------~~~~~~~~ 229 (428)
.+++++|.||++||++|+...+.+.++++.+ .+. +.|+.|+++.. ..++++|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 4679999999999999999999999999999 665 99999988763 47899999
Q ss_pred CCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+.++|+++++..++.....+ . +.+.+.+++.+.+
T Consensus 112 v~~~P~~~lid~~G~i~~~~--~-~~~~l~~~l~~ll 145 (148)
T 3fkf_A 112 ILTLPTNILLSPTGKILARD--I-QGEALTGKLKELL 145 (148)
T ss_dssp CCSSSEEEEECTTSBEEEES--C-CHHHHHHHHHHHC
T ss_pred CCCcCEEEEECCCCeEEEec--C-CHHHHHHHHHHHH
Confidence 99999999997665433332 2 7888888887764
No 310
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.96 E-value=7.9e-10 Score=80.08 Aligned_cols=75 Identities=12% Similarity=0.118 Sum_probs=61.7
Q ss_pred EEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHH
Q 014216 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIES 260 (428)
Q Consensus 181 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~ 260 (428)
.++.|+++||++|+.+.+.+++++..+ +..||.+++++++++||++ +|++++ .+ ++ .+. |..+.+.|.+
T Consensus 2 ~vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~l~~~~g~~-vPtl~~-~~-G~-~v~--g~~~~~~L~~ 70 (87)
T 1ttz_A 2 ALTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAALESAYGLR-VPVLRD-PM-GR-ELD--WPFDAPRLRA 70 (87)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHHHHHHHTTT-CSEEEC-TT-CC-EEE--SCCCHHHHHH
T ss_pred EEEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHHHHHHhCCC-cCeEEE-EC-CE-EEe--CCCCHHHHHH
Confidence 378999999999999999999876543 6789999999999999998 999988 53 33 332 8889999999
Q ss_pred HHHHHH
Q 014216 261 FALEQL 266 (428)
Q Consensus 261 fi~~~~ 266 (428)
++...+
T Consensus 71 ~l~~~~ 76 (87)
T 1ttz_A 71 WLDAAP 76 (87)
T ss_dssp HHHTCC
T ss_pred HHHHHH
Confidence 986553
No 311
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.96 E-value=6e-09 Score=80.88 Aligned_cols=97 Identities=15% Similarity=0.247 Sum_probs=80.0
Q ss_pred CCcEEeCc-cchHHHHhhcCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhcCCCcCcEEEE
Q 014216 160 NESIELNS-SNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILV 238 (428)
Q Consensus 160 ~~v~~l~~-~~~~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~~v~~~P~i~~ 238 (428)
..+..|++ +++..+ ...+.+++|.|+++||+.| .+.|.++|+.+ +.+.|+.+ .+.++++++++. .|++++
T Consensus 21 ~~~~~i~s~~e~e~f-i~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t---~~~~v~~~~~v~-~~~vvl 91 (124)
T 2l4c_A 21 QEPTWLTDVPAAMEF-IAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGIS---TDSEVLTHYNIT-GNTICL 91 (124)
T ss_dssp CCCEECCSHHHHHHH-HHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEE---CCHHHHHHTTCC-SSCEEE
T ss_pred CcceEcCCHHHHHHH-HhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEE---ChHHHHHHcCCC-CCeEEE
Confidence 33455765 445554 4778899999999998776 78999999999 88999986 458899999999 699999
Q ss_pred EcCCCCCcccccC----CCCHHHHHHHHHHH
Q 014216 239 FGADKDSPIPYEG----ARTAGAIESFALEQ 265 (428)
Q Consensus 239 ~~~~~~~~~~y~g----~~~~~~i~~fi~~~ 265 (428)
|+..++....|.| ..+.+.|.+||..+
T Consensus 92 fkkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 92 FRLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp EETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EEcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 9977666788886 78999999999877
No 312
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.50 E-value=7.1e-11 Score=97.07 Aligned_cols=87 Identities=22% Similarity=0.286 Sum_probs=67.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHH-HHHHhc--CceEEEEEcCcccHhHHHHc----------------------C--
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEK-AATVLK--GVATVAALDANEHQSLAQEY----------------------G-- 99 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~-~~~~~~--~~v~~~~vd~~~~~~l~~~~----------------------~-- 99 (428)
++++++|.||++||++|+...|.+.+ +...+. ..+.++.|+++..++.++++ +
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 57899999999999999999999998 887776 45888888887655444333 3
Q ss_pred CccccEEEEE-eCCCCCccccCCCCcchHHHHHHHH
Q 014216 100 IRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 100 v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
+.++|+++++ ++|+.+.++.| .+.+.+.+++.+.
T Consensus 112 ~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l 146 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQI 146 (159)
Confidence 5679999999 67777666666 4666677776654
No 313
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.95 E-value=2.4e-09 Score=105.31 Aligned_cols=95 Identities=17% Similarity=0.233 Sum_probs=79.1
Q ss_pred EeCccchHHHhhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEEEEeCC
Q 014216 34 QLTPNNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPG 112 (428)
Q Consensus 34 ~l~~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~~~~~g 112 (428)
.++++.++ .+.. ..+..++.||++||++|+.+.|.+++++..+. ++.+..+|.+.+++++++|+|.++|++++ +|
T Consensus 103 ~~~~~~~~-~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g 178 (521)
T 1hyu_A 103 KEAQSLLE-QIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQNEITERNVMGVPAVFV--NG 178 (521)
T ss_dssp CSCHHHHH-HHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCSSSEEEE--TT
T ss_pred CCCHHHHH-HHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhhHHHHHHhCCCccCEEEE--CC
Confidence 55666666 4433 46678999999999999999999999999876 79999999999999999999999999866 77
Q ss_pred CCCccccCCCCcchHHHHHHHH
Q 014216 113 KPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 113 ~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
+.+ ..|..+.+.+.+|+.+.
T Consensus 179 ~~~--~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 179 KEF--GQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp EEE--EESCCCHHHHHHHHCCS
T ss_pred EEE--ecCCCCHHHHHHHHhhc
Confidence 654 34888889999988543
No 314
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.95 E-value=1.6e-09 Score=90.04 Aligned_cols=88 Identities=20% Similarity=0.198 Sum_probs=69.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCc-----------ccHhHH-------------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDAN-----------EHQSLA------------------- 95 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~-----------~~~~l~------------------- 95 (428)
++++++|.||++||++|+ ..|.+.++.++++++ +.++.|+++ ...+++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 578999999999999999 999999999999874 888888763 111222
Q ss_pred -----------HHcCCcccc------EEEEE-eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 96 -----------QEYGIRGFP------TIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 96 -----------~~~~v~~~P------~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+.|++.++| +++++ ++|+.+.++.|..+.+.+.+.|.+.+
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 167 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELL 167 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHH
Confidence 246788999 77777 67777788889999999999998775
No 315
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.47 E-value=9.3e-11 Score=94.40 Aligned_cols=70 Identities=21% Similarity=0.482 Sum_probs=58.4
Q ss_pred CCC-eEEEEEECCCChhhhhhhHHHHHHHHHhc---CceEEEEEcCccc-------------------------HhHHHH
Q 014216 47 ANG-VVLVEFYAPWCGHCQALTPIWEKAATVLK---GVATVAALDANEH-------------------------QSLAQE 97 (428)
Q Consensus 47 ~~~-~~lv~f~~~~C~~C~~~~~~~~~~~~~~~---~~v~~~~vd~~~~-------------------------~~l~~~ 97 (428)
+++ +++|.||++||++|+.+.|.+.++++.++ ..+.++.|+++.. ..++++
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAK 103 (143)
Confidence 456 99999999999999999999999999883 3577777887754 378999
Q ss_pred cCCccccEEEEEe-CCCCCc
Q 014216 98 YGIRGFPTIKVFV-PGKPPV 116 (428)
Q Consensus 98 ~~v~~~P~~~~~~-~g~~~~ 116 (428)
|++.++|+++++. +|+.+.
T Consensus 104 ~~v~~~P~~~lid~~G~i~~ 123 (143)
T 2lus_A 104 YGITGIPALVIVKKDGTLIS 123 (143)
Confidence 9999999999997 666433
No 316
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.93 E-value=2e-09 Score=78.09 Aligned_cols=74 Identities=22% Similarity=0.264 Sum_probs=59.3
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccH----hHHHHcC--CccccEEEEEeCCCCCccccCCCCcc
Q 014216 52 LVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQ----SLAQEYG--IRGFPTIKVFVPGKPPVDYQGARDVK 125 (428)
Q Consensus 52 lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----~l~~~~~--v~~~P~~~~~~~g~~~~~~~g~~~~~ 125 (428)
++.|+++||++|+++.+.+.+++..+.+ +.+..+|+++++ ++.+++| +.++|++ +.+|+.+. | .+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~-i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i~---~---~~ 73 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD-FQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHIG---G---YT 73 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS-CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEEE---S---SH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC-ceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEEE---C---HH
Confidence 6889999999999999999999988665 889999998654 8999999 9999997 34665432 2 25
Q ss_pred hHHHHHHHH
Q 014216 126 PIAEFALQQ 134 (428)
Q Consensus 126 ~l~~~i~~~ 134 (428)
.+..++.+.
T Consensus 74 ~l~~~~~~~ 82 (85)
T 1ego_A 74 DFAAWVKEN 82 (85)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 677777654
No 317
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.92 E-value=8e-10 Score=91.92 Aligned_cols=87 Identities=18% Similarity=0.213 Sum_probs=70.8
Q ss_pred CCCeEEEEEECCCChh-hhhhhHHHHHHHHHhcC----ceEEEEEcCccc----------------------------Hh
Q 014216 47 ANGVVLVEFYAPWCGH-CQALTPIWEKAATVLKG----VATVAALDANEH----------------------------QS 93 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~-C~~~~~~~~~~~~~~~~----~v~~~~vd~~~~----------------------------~~ 93 (428)
++++++|.||++||++ |+...|.+.++.+.+++ .+.++.|+++.. ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 5789999999999997 99999999999999884 588999998742 35
Q ss_pred HHHHcCC---------------ccccEEEEEeCCCCCccccCCC--CcchHHHHHHH
Q 014216 94 LAQEYGI---------------RGFPTIKVFVPGKPPVDYQGAR--DVKPIAEFALQ 133 (428)
Q Consensus 94 l~~~~~v---------------~~~P~~~~~~~g~~~~~~~g~~--~~~~l~~~i~~ 133 (428)
++++|++ .++|+++++.+|+.+..+.|.. +.+.+.+.|.+
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADLQA 170 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHHHH
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHH
Confidence 6666664 5789999999666677778877 77778777764
No 318
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.91 E-value=6.3e-09 Score=86.13 Aligned_cols=90 Identities=19% Similarity=0.216 Sum_probs=70.1
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcc-------c----HhH-HHHc---------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANE-------H----QSL-AQEY--------------- 98 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~-------~----~~l-~~~~--------------- 98 (428)
++++++|.||++||++|+...|.+.++.++++++ +.++.|+++. . .++ .+++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 5789999999999999999999999999999874 8888888752 1 223 1322
Q ss_pred --------------C-----CccccEEEEE-eCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 99 --------------G-----IRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 99 --------------~-----v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
| ++++|+++++ ++|+.+.++.|..+.+.+.+.|.+.+.
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 167 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLE 167 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhc
Confidence 3 3345787777 567777788898899999999987763
No 319
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.91 E-value=2.9e-09 Score=86.86 Aligned_cols=89 Identities=21% Similarity=0.405 Sum_probs=73.5
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC-----------------------CchhHhhhcCCCcC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD-----------------------SEKSLMSKFNVQGF 233 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~-----------------------~~~~~~~~~~v~~~ 233 (428)
.+++++|.||++||++|+...+.+.++++. +++.|..|+++ ....+++.|++.++
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 118 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGV 118 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCcc
Confidence 367899999999999999999999999876 56888887753 34478889999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
|+++++..++.....+.|..+.+.+..++.+.+.
T Consensus 119 P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 119 PETFVVGREGTIVYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp CEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHH
T ss_pred CeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHH
Confidence 9988887666666677899999999998877753
No 320
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.91 E-value=3.4e-09 Score=87.87 Aligned_cols=89 Identities=15% Similarity=0.143 Sum_probs=71.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcc-------c----HhHHH-Hc---------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANE-------H----QSLAQ-EY--------------- 98 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~-------~----~~l~~-~~--------------- 98 (428)
++++++|.||++||++|+...|.+.+++++++++ +.++.|+++. . .++++ ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 5789999999999999999999999999999875 8899998752 1 23333 32
Q ss_pred --------------CC--cccc---EEEEE-eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 99 --------------GI--RGFP---TIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 99 --------------~v--~~~P---~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
++ .++| +++++ ++|+.+.++.|..+.+.+.+.|.+.+
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 167 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLL 167 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHT
T ss_pred chHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHh
Confidence 34 5678 77777 67777778899999999999988764
No 321
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.90 E-value=6.3e-09 Score=85.19 Aligned_cols=89 Identities=15% Similarity=0.367 Sum_probs=74.4
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhc-CCeEEEEEeCCC-------------------chhHhhhcCCCcCcEE
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK-GKVKLGHVDCDS-------------------EKSLMSKFNVQGFPTI 236 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~-~~~~f~~v~~~~-------------------~~~~~~~~~v~~~P~i 236 (428)
.+++++|.||++||+.|+...+.+.++++.+. ..+.|+.|+++. +..+++.|++..+|++
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 119 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDT 119 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceE
Confidence 46799999999999999999999999999998 469999999876 5789999999999999
Q ss_pred EEEcCCCCCcccccCC--CCHHHHHHHHHHH
Q 014216 237 LVFGADKDSPIPYEGA--RTAGAIESFALEQ 265 (428)
Q Consensus 237 ~~~~~~~~~~~~y~g~--~~~~~i~~fi~~~ 265 (428)
+++..++.....+.|. .+.+++.+.+.++
T Consensus 120 ~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~ 150 (158)
T 3hdc_A 120 FIVDRKGIIRQRVTGGIEWDAPKVVSYLKSL 150 (158)
T ss_dssp EEECTTSBEEEEEESCCCTTSHHHHHHHHTT
T ss_pred EEEcCCCCEEEEEeCCCccchHHHHHHHHhh
Confidence 9997777666777776 4556666665544
No 322
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.90 E-value=4.5e-09 Score=88.95 Aligned_cols=90 Identities=19% Similarity=0.169 Sum_probs=72.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcc-------c----HhHH-HH----------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANE-------H----QSLA-QE---------------- 97 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~-------~----~~l~-~~---------------- 97 (428)
+++++||.||++||++|+...|.+.++.++++++ +.++.|+++. . .+++ ++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 5789999999999999999999999999999874 8888888762 1 1233 22
Q ss_pred -------------cCCcccc------EEEEE-eCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 98 -------------YGIRGFP------TIKVF-VPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 98 -------------~~v~~~P------~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
+++.++| +++++ ++|+.+.++.|..+.+.+.+.|.+.+.
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 3778888 66666 677777788898899888888887763
No 323
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.90 E-value=7.1e-09 Score=85.52 Aligned_cols=87 Identities=24% Similarity=0.452 Sum_probs=73.5
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC------------------Cc-----------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD------------------SE----------------- 221 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~------------------~~----------------- 221 (428)
..++++|.||++||++|+...+.+.++++.+. .+.|+.|+++ .+
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 46799999999999999999999999999998 8999999987 33
Q ss_pred -----hhHhhhcCCCcCcEEEEEcCCCCCcccccCCC-CHHHHHHHHHHHH
Q 014216 222 -----KSLMSKFNVQGFPTILVFGADKDSPIPYEGAR-TAGAIESFALEQL 266 (428)
Q Consensus 222 -----~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~-~~~~i~~fi~~~~ 266 (428)
..+++.|++..+|+++++..++.. .+.|.. +.+.|.+++.+.+
T Consensus 115 ~~~d~~~~~~~~~v~~~P~~~lid~~G~i--~~~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVRSIDYIVIMDKSSNV--LYAGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp EEECCSHHHHHTTCCSSSEEEEEETTCCE--EEEEESCCHHHHHHHHHHC-
T ss_pred EEeChHHHHHHhCCCCceEEEEEcCCCcE--EEeCCCCCHHHHHHHHHHHh
Confidence 278899999999999999766543 237888 8999999887653
No 324
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.90 E-value=6.7e-09 Score=84.52 Aligned_cols=90 Identities=21% Similarity=0.383 Sum_probs=75.1
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCCc-----------------------hhHhhhcCCCc
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSE-----------------------KSLMSKFNVQG 232 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~-----------------------~~~~~~~~v~~ 232 (428)
.+++++|.||++||+.|+...+.+.++++.+.+ .+.|..|+.+.+ ..+++.|++..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 467999999999999999999999999999987 699999988765 34888999999
Q ss_pred CcEEEEEcCCCCCcccccCCC--CHHHHHHHHHHHH
Q 014216 233 FPTILVFGADKDSPIPYEGAR--TAGAIESFALEQL 266 (428)
Q Consensus 233 ~P~i~~~~~~~~~~~~y~g~~--~~~~i~~fi~~~~ 266 (428)
+|+++++..++.....+.|.. +.+++.+++.+..
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~ 142 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNEL 142 (154)
T ss_dssp BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC-
T ss_pred CCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHH
Confidence 999999977776666677764 6678888886654
No 325
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.89 E-value=7e-09 Score=84.35 Aligned_cols=85 Identities=9% Similarity=0.180 Sum_probs=71.6
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCCchh-----------------------HhhhcCCCc
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDSEKS-----------------------LMSKFNVQG 232 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~~~~-----------------------~~~~~~v~~ 232 (428)
..++++|.||++||++|+...+.+.++++.+.+. +.++.|+++...+ +++.|++..
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN 113 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc
Confidence 3578999999999999999999999999999875 9999999887654 888999999
Q ss_pred CcEEEEEcCCCCCcccccCCCCHHHHHHH
Q 014216 233 FPTILVFGADKDSPIPYEGARTAGAIESF 261 (428)
Q Consensus 233 ~P~i~~~~~~~~~~~~y~g~~~~~~i~~f 261 (428)
+|+++++.+++.....+.|..+.++...-
T Consensus 114 ~P~~~lid~~G~i~~~~~g~~~~e~~~~~ 142 (152)
T 2lrt_A 114 LPSVFLVNRNNELSARGENIKDLDEAIKK 142 (152)
T ss_dssp CSEEEEEETTTEEEEETTTCSCHHHHHHH
T ss_pred CceEEEECCCCeEEEecCCHHHHHHHHHH
Confidence 99999998777666777787776655443
No 326
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.87 E-value=8.8e-09 Score=86.33 Aligned_cols=94 Identities=16% Similarity=0.128 Sum_probs=73.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcc-----------cHhHHHH-cCCc------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANE-----------HQSLAQE-YGIR------------ 101 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~-----------~~~l~~~-~~v~------------ 101 (428)
+++++||.||++||++|+...|.+.++.+.++++ +.++.|+++. ..+++++ +++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 5789999999999999999999999999999875 8888887653 2355556 5432
Q ss_pred --------------cccE----EEEE-eCCCCCccccCCCCcchHHHHHHHHHHHHHH
Q 014216 102 --------------GFPT----IKVF-VPGKPPVDYQGARDVKPIAEFALQQIKALLK 140 (428)
Q Consensus 102 --------------~~P~----~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~~~~~ 140 (428)
++|+ .+++ ++|+.+.++.|..+.+.+...|.+.+.....
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~~~~~ 174 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQVII 174 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 2565 4555 6777778889999999999999888766543
No 327
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.84 E-value=1.2e-08 Score=86.76 Aligned_cols=90 Identities=17% Similarity=0.231 Sum_probs=75.0
Q ss_pred CeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCC-----------------------------CchhHhhhc
Q 014216 179 DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCD-----------------------------SEKSLMSKF 228 (428)
Q Consensus 179 ~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~-----------------------------~~~~~~~~~ 228 (428)
.+++|.||++||++|+...+.+.++++.+.++ +.|..|+++ .+..+++.|
T Consensus 47 ~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (196)
T 2ywi_A 47 AATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAY 126 (196)
T ss_dssp SEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHH
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHh
Confidence 36999999999999999999999999999874 999999873 345789999
Q ss_pred CCCcCcEEEEEcCCCCCccc---------ccCCCCHHHHHHHHHHHHhh
Q 014216 229 NVQGFPTILVFGADKDSPIP---------YEGARTAGAIESFALEQLET 268 (428)
Q Consensus 229 ~v~~~P~i~~~~~~~~~~~~---------y~g~~~~~~i~~fi~~~~~~ 268 (428)
++..+|+++++..++..... +.|..+.++|.+.+.+.+..
T Consensus 127 ~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 127 DAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEG 175 (196)
T ss_dssp TCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHT
T ss_pred CCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcC
Confidence 99999999999766644443 45777899999999887654
No 328
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.84 E-value=4.8e-09 Score=88.57 Aligned_cols=89 Identities=15% Similarity=0.116 Sum_probs=73.2
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc-------------------------cHhHHHHcC
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE-------------------------HQSLAQEYG 99 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~-------------------------~~~l~~~~~ 99 (428)
.+++++|.|| ++||++|+...|.+.++++++++ .+.++.|+++. +..+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 4789999999 99999999999999999999875 47888888763 346888999
Q ss_pred Cc------cccEEEEE-eCCCCCccccCCC----CcchHHHHHHHHH
Q 014216 100 IR------GFPTIKVF-VPGKPPVDYQGAR----DVKPIAEFALQQI 135 (428)
Q Consensus 100 v~------~~P~~~~~-~~g~~~~~~~g~~----~~~~l~~~i~~~l 135 (428)
+. ++|+++++ ++|+.+..+.|.. +.+.+.+.|.+..
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 99 99999999 5677666666654 6778888887654
No 329
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.83 E-value=1.1e-08 Score=82.11 Aligned_cols=86 Identities=13% Similarity=0.318 Sum_probs=69.1
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHH---HHHHhcC-CeEEEEEeCCCchhH------------------------hhhc
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKK---AANNLKG-KVKLGHVDCDSEKSL------------------------MSKF 228 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~---~a~~~~~-~~~f~~v~~~~~~~~------------------------~~~~ 228 (428)
..++++|.||++||++|+...+.+.+ +.+.+.+ .+.+..|+.+.+.+. ++.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 46799999999999999999999988 8888865 499999988765543 4489
Q ss_pred CCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 229 NVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 229 ~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
++..+|+++++..++. +.+ +..+.++|.+++.+.
T Consensus 106 ~v~~~P~~~lid~~G~--i~~-~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKR--VIL-KDTSMEQLIDYLATQ 139 (142)
T ss_dssp CCCSSSEEEEECTTCB--EEE-CSCCHHHHHHHHHC-
T ss_pred CCCCCCeEEEECCCCC--EEe-cCCCHHHHHHHHHHH
Confidence 9999999999976553 333 567899999988665
No 330
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.82 E-value=1.9e-08 Score=82.96 Aligned_cols=66 Identities=24% Similarity=0.485 Sum_probs=59.5
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcC--CeEEEEEeCCCc------------------------hhHhhhcCC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG--KVKLGHVDCDSE------------------------KSLMSKFNV 230 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~--~~~f~~v~~~~~------------------------~~~~~~~~v 230 (428)
..++++|.||++||++|+...+.+.++++.+.+ .+.++.|+++.+ ..+++.|++
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 467899999999999999999999999999986 688988888776 678999999
Q ss_pred CcCcEEEEEcCC
Q 014216 231 QGFPTILVFGAD 242 (428)
Q Consensus 231 ~~~P~i~~~~~~ 242 (428)
..+|+++++..+
T Consensus 127 ~~~Pt~~lid~~ 138 (165)
T 3s9f_A 127 ESIPTLIGLNAD 138 (165)
T ss_dssp CSSSEEEEEETT
T ss_pred CCCCEEEEEeCC
Confidence 999999999865
No 331
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.82 E-value=1.3e-08 Score=87.35 Aligned_cols=89 Identities=13% Similarity=0.023 Sum_probs=68.9
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcc--------c---HhHHH------HcC---------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANE--------H---QSLAQ------EYG--------- 99 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~--------~---~~l~~------~~~--------- 99 (428)
+++++||.||++||++|++..|.+.++.++++++ +.++.|+++. . .++++ +++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~d~ 125 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKC 125 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBCCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHHHHHHHHHhcccccccccceEEEEEe
Confidence 5789999999999999999999999999999864 8888888751 1 12232 333
Q ss_pred --------------------------------------------CccccEEEEE-eCCCCCccccCCCCcchHHHHHHHH
Q 014216 100 --------------------------------------------IRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 100 --------------------------------------------v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
+.+.|+.+++ ++|+.+.++.|..+.+.+.+.|.+.
T Consensus 126 d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~~l 205 (208)
T 2f8a_A 126 EVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEAL 205 (208)
T ss_dssp CCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHH
T ss_pred ecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 2334777777 6677777888999999998888776
Q ss_pred H
Q 014216 135 I 135 (428)
Q Consensus 135 l 135 (428)
+
T Consensus 206 l 206 (208)
T 2f8a_A 206 L 206 (208)
T ss_dssp H
T ss_pred h
Confidence 4
No 332
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.82 E-value=6.2e-09 Score=88.49 Aligned_cols=89 Identities=11% Similarity=0.090 Sum_probs=72.0
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc-------------------------cHhHHHHcC
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE-------------------------HQSLAQEYG 99 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~-------------------------~~~l~~~~~ 99 (428)
.+++++|.|| ++||++|+...|.+.++.+.+++ .+.++.|+++. +..+++.|+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 4789999999 99999999999999999999886 48888888763 346888999
Q ss_pred Cc-----cccEEEEE-eCCCCCccccCCC----CcchHHHHHHHHH
Q 014216 100 IR-----GFPTIKVF-VPGKPPVDYQGAR----DVKPIAEFALQQI 135 (428)
Q Consensus 100 v~-----~~P~~~~~-~~g~~~~~~~g~~----~~~~l~~~i~~~l 135 (428)
+. ++|+++++ ++|+.+..+.|.. +.+.+.+.|.+..
T Consensus 124 v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 169 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQ 169 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred CcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 99 99999999 4676666666654 5667777776553
No 333
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.82 E-value=6.9e-09 Score=87.57 Aligned_cols=90 Identities=18% Similarity=0.161 Sum_probs=69.3
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcc--------cHhHH----------------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANE--------HQSLA---------------------- 95 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~--------~~~l~---------------------- 95 (428)
+++++||.||++||++|+...|.+.++.++++++ +.++.|+++. ...+.
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 5789999999999999999999999999999874 8888887651 11111
Q ss_pred --------------HHcCCcccc---EEEEE-eCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 96 --------------QEYGIRGFP---TIKVF-VPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 96 --------------~~~~v~~~P---~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
..+++..+| +++++ ++|+.+..+.|..+.+.+.+.|.+.+.
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC-
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 112344666 87777 677777788899999999888887753
No 334
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.82 E-value=1.8e-08 Score=81.02 Aligned_cols=68 Identities=16% Similarity=0.323 Sum_probs=59.6
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhc--CCeEEEEEeCCCc------------------------hhHhhhcCC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK--GKVKLGHVDCDSE------------------------KSLMSKFNV 230 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~--~~~~f~~v~~~~~------------------------~~~~~~~~v 230 (428)
.+++++|.||++||++|+...+.+.++++.+. ..+.++.|+++.+ ..++++|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 46789999999999999999999999999998 4799999988763 478999999
Q ss_pred CcCcEEEEEc-CCCC
Q 014216 231 QGFPTILVFG-ADKD 244 (428)
Q Consensus 231 ~~~P~i~~~~-~~~~ 244 (428)
..+|+++++. .++.
T Consensus 107 ~~~P~~~lid~~~G~ 121 (144)
T 1i5g_A 107 KSIPTLVGVEADSGN 121 (144)
T ss_dssp CSSSEEEEEETTTCC
T ss_pred CCCCEEEEEECCCCc
Confidence 9999999997 5553
No 335
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.81 E-value=1.6e-08 Score=81.17 Aligned_cols=83 Identities=16% Similarity=0.278 Sum_probs=66.7
Q ss_pred CCeEEEEEECCCChhHhhHHHHHHH---HHHHhcC-CeEEEEEeCCCchh------------------------HhhhcC
Q 014216 178 KDLWIVEFFAPWCGHCKKLAPEWKK---AANNLKG-KVKLGHVDCDSEKS------------------------LMSKFN 229 (428)
Q Consensus 178 ~~~~~v~f~~~~c~~c~~~~~~~~~---~a~~~~~-~~~f~~v~~~~~~~------------------------~~~~~~ 229 (428)
.++++|.||++||++|+...+.+.+ +.+.+++ .+.+..|+.+...+ +++.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 5789999999999999999999999 9999865 59999998876633 477899
Q ss_pred CCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHH
Q 014216 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFAL 263 (428)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~ 263 (428)
+..+|+++++..++. +.+.+ ...++|.+|+.
T Consensus 111 v~~~P~~~lid~~G~--i~~~~-~~~~~l~~~l~ 141 (142)
T 3eur_A 111 LRAIPTLYLLDKNKT--VLLKD-ATLQKVEQYLA 141 (142)
T ss_dssp CTTCSEEEEECTTCB--EEEEE-ECHHHHHHHHH
T ss_pred CCcCCeEEEECCCCc--EEecC-CCHHHHHHHHh
Confidence 999999999976653 33332 35788887764
No 336
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.81 E-value=1.9e-08 Score=81.07 Aligned_cols=68 Identities=22% Similarity=0.439 Sum_probs=59.4
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhc--CCeEEEEEeCCCc------------------------hhHhhhcCC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK--GKVKLGHVDCDSE------------------------KSLMSKFNV 230 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~--~~~~f~~v~~~~~------------------------~~~~~~~~v 230 (428)
.+++++|.||++||++|+...+.+.++++.+. ..+.++.|+++.+ ..++++|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 46789999999999999999999999999998 4789999988763 468999999
Q ss_pred CcCcEEEEEc-CCCC
Q 014216 231 QGFPTILVFG-ADKD 244 (428)
Q Consensus 231 ~~~P~i~~~~-~~~~ 244 (428)
..+|+++++. .++.
T Consensus 107 ~~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 107 ESIPTLIGVDADSGD 121 (146)
T ss_dssp CSSSEEEEEETTTCC
T ss_pred CCCCEEEEEECCCCe
Confidence 9999999997 5553
No 337
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.81 E-value=2.2e-08 Score=92.54 Aligned_cols=94 Identities=13% Similarity=0.170 Sum_probs=80.7
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCC---------------------------chhHhhhc
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS---------------------------EKSLMSKF 228 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~---------------------------~~~~~~~~ 228 (428)
..++++|.||++||++|+...+.+.++++.+.+ .+.|+.|+++. +..++++|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 367999999999999999999999999999987 59999998642 35788999
Q ss_pred CCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhhcC
Q 014216 229 NVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNV 270 (428)
Q Consensus 229 ~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~ 270 (428)
++..+|+++++..++.....+.|..+.+++.++|.+.+....
T Consensus 161 gV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~e~~ 202 (352)
T 2hyx_A 161 RNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLNDAK 202 (352)
T ss_dssp TCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHHHHS
T ss_pred CCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHhhcc
Confidence 999999999997777667778898999999999988876543
No 338
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.81 E-value=1.5e-08 Score=84.61 Aligned_cols=88 Identities=16% Similarity=0.256 Sum_probs=73.4
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeC-----------------------CCchhHhhhcCCCcC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC-----------------------DSEKSLMSKFNVQGF 233 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~-----------------------~~~~~~~~~~~v~~~ 233 (428)
.+++++|.||++||++|+...+.+.++++. .+.|+.|++ +.+..+++.|++..+
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 133 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGA 133 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCC
Confidence 367899999999999999999999999887 577777764 334568889999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
|+++++..++.....+.|..+.+.+.+++.+.+.
T Consensus 134 P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 134 PETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp CEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred CeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 9999997777666777899999999988877754
No 339
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.80 E-value=9.1e-09 Score=84.38 Aligned_cols=79 Identities=18% Similarity=0.245 Sum_probs=64.6
Q ss_pred CCC-eEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc-----------------------cHhHHHHcCC
Q 014216 47 ANG-VVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE-----------------------HQSLAQEYGI 100 (428)
Q Consensus 47 ~~~-~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~-----------------------~~~l~~~~~v 100 (428)
.++ +++|.|| ++||++|+...|.+.++++++++ .+.++.|+++. +..+++.|++
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v 113 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGV 113 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTC
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCC
Confidence 355 9999998 99999999999999999999875 58888888763 5678999999
Q ss_pred c----ccc--EEEEE-eCCCCCccccCCCCcc
Q 014216 101 R----GFP--TIKVF-VPGKPPVDYQGARDVK 125 (428)
Q Consensus 101 ~----~~P--~~~~~-~~g~~~~~~~g~~~~~ 125 (428)
. ++| +++++ ++|+.+..+.|..+.+
T Consensus 114 ~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~ 145 (160)
T 1xvw_A 114 FNEQAGIANRGTFVVDRSGIIRFAEMKQPGEV 145 (160)
T ss_dssp EETTTTEECSEEEEECTTSBEEEEEECCTTCC
T ss_pred ccccCCCeeeeEEEECCCCeEEEEEecCCCCC
Confidence 9 999 66666 5677677777876544
No 340
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.80 E-value=2.3e-08 Score=84.40 Aligned_cols=90 Identities=18% Similarity=0.302 Sum_probs=73.3
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC-----------------------------CchhHhhh
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD-----------------------------SEKSLMSK 227 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~-----------------------------~~~~~~~~ 227 (428)
..++++|.|+++||++|+...+.+.++++.+.+++.|..|+++ .+..+++.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 3578999999999999999999999999999877999999873 34578999
Q ss_pred cCCCcCcEEEEEcCCCCCcccccCC----------CCHHHHHHHHHHHHhh
Q 014216 228 FNVQGFPTILVFGADKDSPIPYEGA----------RTAGAIESFALEQLET 268 (428)
Q Consensus 228 ~~v~~~P~i~~~~~~~~~~~~y~g~----------~~~~~i~~fi~~~~~~ 268 (428)
|++..+|+++++..++. +.+.|. .+.++|...|.+.+..
T Consensus 112 ~~v~~~P~~~lid~~G~--i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 112 YRALRTPEVFLFDERRL--LRYHGRVNDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp TTCCEESEEEEECTTCB--EEEEECSSSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred cCCCCCCeEEEECCCCc--EEEEEecCCccccccccCHHHHHHHHHHHHcC
Confidence 99999999999976553 333343 4678999998887643
No 341
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.80 E-value=4.1e-08 Score=79.51 Aligned_cols=87 Identities=13% Similarity=0.274 Sum_probs=71.9
Q ss_pred cCCeEEEEEECCCChh--HhhHHHHHHHHHHHh-cCC-eEEEEEeCCCch-------------------------hHhhh
Q 014216 177 SKDLWIVEFFAPWCGH--CKKLAPEWKKAANNL-KGK-VKLGHVDCDSEK-------------------------SLMSK 227 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~--c~~~~~~~~~~a~~~-~~~-~~f~~v~~~~~~-------------------------~~~~~ 227 (428)
.+++++|.||++||++ |+...+.+.++.+.+ .+. +.|..|+.+..+ .+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 3579999999999999 999999999999999 664 999999887654 78899
Q ss_pred cCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 228 FNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 228 ~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
|++..+|+++++.+++.....+ .+.+++.+.+.+.+
T Consensus 112 ~~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 112 YSIYKIPANILLSSDGKILAKN---LRGEELKKKIENIV 147 (150)
T ss_dssp TTCCSSSEEEEECTTSBEEEES---CCHHHHHHHHHHHH
T ss_pred cCCCccCeEEEECCCCEEEEcc---CCHHHHHHHHHHHH
Confidence 9999999999997666433333 27888888877665
No 342
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.79 E-value=5.7e-09 Score=87.60 Aligned_cols=88 Identities=18% Similarity=0.106 Sum_probs=67.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcc-------c----HhHHHH-c---------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANE-------H----QSLAQE-Y--------------- 98 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~-------~----~~l~~~-~--------------- 98 (428)
+++++||.||++||++|+...|.+.+++++++++ +.++.|+++. . .+++++ +
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 5789999999999999999999999999999875 8888898753 1 233333 2
Q ss_pred --------CCcccc-------EEEEE-eCCCCCccccCCCCcchHHHHHHHH
Q 014216 99 --------GIRGFP-------TIKVF-VPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 99 --------~v~~~P-------~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
++.++| +.+++ ++|+.+.++.|..+.+.+.+.|.+.
T Consensus 128 ~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 179 (181)
T 2p31_A 128 GAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITAL 179 (181)
T ss_dssp TSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTT
T ss_pred cchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHH
Confidence 245678 66666 6777777888988888887777643
No 343
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.79 E-value=5e-08 Score=78.66 Aligned_cols=102 Identities=11% Similarity=0.149 Sum_probs=78.5
Q ss_pred cchHHHH---hhcCCeEEEEEECCCChhHhhHHHHH---HHHHHHhcCCeEEEEEeCCCc--hhHhhhcCCCcCcEEEEE
Q 014216 168 SNFDELV---LKSKDLWIVEFFAPWCGHCKKLAPEW---KKAANNLKGKVKLGHVDCDSE--KSLMSKFNVQGFPTILVF 239 (428)
Q Consensus 168 ~~~~~~~---~~~~~~~~v~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~f~~v~~~~~--~~~~~~~~v~~~P~i~~~ 239 (428)
.++.+.+ ...+++++|.|+++||..|+.+.... .++++.++.++.+..+|.+.. ..++++|++.++|+++++
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fl 108 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSIL 108 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEE
Confidence 3455444 23588999999999999999997654 566777766889999988653 368899999999999999
Q ss_pred cCC-CCCcccccCCCCHHHHHHHHHHHHhhcC
Q 014216 240 GAD-KDSPIPYEGARTAGAIESFALEQLETNV 270 (428)
Q Consensus 240 ~~~-~~~~~~y~g~~~~~~i~~fi~~~~~~~~ 270 (428)
... ++......| .+++++..++.+.+....
T Consensus 109 d~~~G~~l~~~~g-~~~~~fl~~L~~~l~~~~ 139 (153)
T 2dlx_A 109 DPRTGQKLVEWHQ-LDVSSFLDQVTGFLGEHG 139 (153)
T ss_dssp CTTTCCCCEEESS-CCHHHHHHHHHHHHHHTC
T ss_pred eCCCCcEeeecCC-CCHHHHHHHHHHHHHhcC
Confidence 765 444445555 899999999888875543
No 344
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.79 E-value=2.3e-08 Score=83.33 Aligned_cols=83 Identities=17% Similarity=0.230 Sum_probs=66.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEc---------------------------------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALD--------------------------------------- 87 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd--------------------------------------- 87 (428)
..++.|+.|+.+||++|+++.|.+.++.+.+++ +.+...+
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~ 99 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKAN 99 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCC
Confidence 367899999999999999999999999998766 4444433
Q ss_pred ------------------------------CcccHhHHHHcCCccccEEEEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 88 ------------------------------ANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 88 ------------------------------~~~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
...+.++++++||.++|++++ +|+ .+.|..+.+.+.+.|.+.+
T Consensus 100 ~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~---~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 100 ETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA---LVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE---EECSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE---EeeCCCCHHHHHHHHHHHH
Confidence 223446788999999999876 563 5679999999999888765
No 345
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.79 E-value=1.5e-08 Score=87.55 Aligned_cols=82 Identities=24% Similarity=0.367 Sum_probs=63.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEc---------------------------------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALD--------------------------------------- 87 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd--------------------------------------- 87 (428)
..+++++.||++||++|++++|.+.++... .+.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 357899999999999999999999998763 23333221
Q ss_pred -C----cccHhHHHHcCCccccEEEEEeCCCCCccccCCCCcchHHHHHHHHH
Q 014216 88 -A----NEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 88 -~----~~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
| +++.++++++||+++|++ ++.+|. .+.|..+.+.|.++|.+..
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~---~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 162 SCDVDIADHYALGVQLGVSGTPAV-VLSNGT---LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCSCCHHHHHHHHHHHTCCSSSEE-ECTTSC---EEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccCEE-EEcCCe---EecCCCCHHHHHHHHHHhh
Confidence 1 245678999999999998 556663 5678889999999988764
No 346
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.78 E-value=4.7e-09 Score=89.49 Aligned_cols=88 Identities=9% Similarity=0.115 Sum_probs=70.5
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc----------------------------cHhHHH
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 96 (428)
++++++|.|| ++||++|+...|.+.++.+++.+ .+.++.|+++. +..+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 4789999999 99999999999999999998875 48888888763 457889
Q ss_pred HcCCc-----cccEEEEE-eCCCCCccccCCC----CcchHHHHHHHH
Q 014216 97 EYGIR-----GFPTIKVF-VPGKPPVDYQGAR----DVKPIAEFALQQ 134 (428)
Q Consensus 97 ~~~v~-----~~P~~~~~-~~g~~~~~~~g~~----~~~~l~~~i~~~ 134 (428)
.|++. ++|+++++ ++|+....+.|.. +.+.+.+.+.+.
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 99999 99999999 4676666666655 455666666554
No 347
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.78 E-value=2.6e-08 Score=80.04 Aligned_cols=68 Identities=18% Similarity=0.385 Sum_probs=59.1
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhc--CCeEEEEEeCCCc------------------------hhHhhhcCC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK--GKVKLGHVDCDSE------------------------KSLMSKFNV 230 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~--~~~~f~~v~~~~~------------------------~~~~~~~~v 230 (428)
.+++++|.|+++||++|+...+.+.++++.+. ..+.++.|+++.+ ..++++|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 46789999999999999999999999999998 4688998888763 368899999
Q ss_pred CcCcEEEEEc-CCCC
Q 014216 231 QGFPTILVFG-ADKD 244 (428)
Q Consensus 231 ~~~P~i~~~~-~~~~ 244 (428)
..+|+++++. .++.
T Consensus 107 ~~~Pt~~lid~~~G~ 121 (144)
T 1o73_A 107 ESIPTLITINADTGA 121 (144)
T ss_dssp CSSSEEEEEETTTCC
T ss_pred CCCCEEEEEECCCCe
Confidence 9999999998 5553
No 348
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.77 E-value=5.1e-08 Score=82.07 Aligned_cols=91 Identities=16% Similarity=0.353 Sum_probs=74.9
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhc-CCeEEEEEeCCCc-----hhHhhhcCCC-------------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK-GKVKLGHVDCDSE-----KSLMSKFNVQ------------------- 231 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~-~~~~f~~v~~~~~-----~~~~~~~~v~------------------- 231 (428)
..++++|.||++||+.|+...+.+.++.+.+. ..+.++.|+++.. ..+++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 46789999999999999999999999999997 4699999988765 4567777764
Q ss_pred ----cCcEEEEEcCCCCCcccccCCCC--HHHHHHHHHHHHh
Q 014216 232 ----GFPTILVFGADKDSPIPYEGART--AGAIESFALEQLE 267 (428)
Q Consensus 232 ----~~P~i~~~~~~~~~~~~y~g~~~--~~~i~~fi~~~~~ 267 (428)
.+|+++++..++.....+.|..+ .+++..++...+.
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 180 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATG 180 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC
T ss_pred cccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhc
Confidence 78999999777766667778754 7889999887763
No 349
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.75 E-value=2e-08 Score=84.61 Aligned_cols=88 Identities=14% Similarity=0.015 Sum_probs=67.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcc-----------cHhHHHHcCC--------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANE-----------HQSLAQEYGI-------------- 100 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~-----------~~~l~~~~~v-------------- 100 (428)
++++++|.||++||++|+...|.+.++.++++++ +.++.|+++. ..++++++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 127 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 127 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSSTT
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCChh
Confidence 5789999999999999999999999999999864 8888888752 1234443332
Q ss_pred ----------------------ccccEEEEE-eCCCCCccccCCCCcchHHHHHHHH
Q 014216 101 ----------------------RGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 101 ----------------------~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
+.+|+.+++ ++|+.+.++.|..+.+.+.+.|.+.
T Consensus 128 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 128 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp BCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHH
T ss_pred hhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHh
Confidence 224788888 5677777888988888888777654
No 350
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.75 E-value=9.9e-09 Score=86.29 Aligned_cols=86 Identities=17% Similarity=0.105 Sum_probs=65.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcc-------c----HhHHHHc----------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANE-------H----QSLAQEY---------------- 98 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~-------~----~~l~~~~---------------- 98 (428)
+++++||.||++||++|+...|.+.++.++++++ +.++.|+++. . .++++++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 5789999999999999999999999999999864 8888888752 1 1222222
Q ss_pred ---------------C-----CccccEEEEE-eCCCCCccccCCCCcchHHHHHH
Q 014216 99 ---------------G-----IRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFAL 132 (428)
Q Consensus 99 ---------------~-----v~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~ 132 (428)
+ ++.+|+++++ ++|+.+.++.|..+.+.+.+.|.
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 180 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLP 180 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSG
T ss_pred hhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHH
Confidence 3 3335998888 56777778889888877766654
No 351
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.69 E-value=4.2e-08 Score=84.29 Aligned_cols=80 Identities=21% Similarity=0.329 Sum_probs=61.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEE--Ec-------------------------------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAA--LD------------------------------------- 87 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~--vd------------------------------------- 87 (428)
..+++|+.|+++||++|++++|.+.++... + +.+.. +.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~-v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--G-ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 356899999999999999999999997652 2 33322 21
Q ss_pred -C----cccHhHHHHcCCccccEEEEEeCCCCCccccCCCCcchHHHHHHH
Q 014216 88 -A----NEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQ 133 (428)
Q Consensus 88 -~----~~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i~~ 133 (428)
| +++.++++++||+++|++++ .+|+ .+.|..+.+.|.++|.+
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~---~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRGTPSIVT-STGE---LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC---CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE---EecCCCCHHHHHHHHHh
Confidence 1 23467889999999999876 6775 56788899988888864
No 352
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.67 E-value=7e-08 Score=81.71 Aligned_cols=118 Identities=22% Similarity=0.353 Sum_probs=74.7
Q ss_pred cHhHHHHcCCccccEEEEEeCCCCCccccCCCCcchHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccch
Q 014216 91 HQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNF 170 (428)
Q Consensus 91 ~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 170 (428)
+...++.+||+++|++++ +|+..... +..+.+++..|+.+.+. +.+.+..+..+..... ...+.....+...
T Consensus 39 ~~~~a~~~gi~gvP~fvi--ngk~~~~~-~~~~~~~~~~f~~~~~~--l~~~L~s~~~p~~~~~-~~~g~~y~~l~~p-- 110 (197)
T 1un2_A 39 QEKAAADVQLRGVPAMFV--NGKYQLNP-QGMDTSNMDVFVQQYAD--TVKYLSEKKGGGTGAQ-YEDGKQYTTLEKP-- 110 (197)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTTEEECG-GGSCCSSHHHHHHHHHH--HHHHHTC----------CCBTTTEEECSSC--
T ss_pred HHHHHHHcCCCcCCEEEE--cceEecCc-cccccccHHHHHHHHHH--HHHHHHhCcccccccc-cCCCCCceEccCC--
Confidence 456788999999999865 66532221 23455678888877665 4444433322211110 0011222222210
Q ss_pred HHHHhhcCCeEEEEEECCCChhHhhHHHHH---HHHHHHhcCCeEEEEEeCCCc
Q 014216 171 DELVLKSKDLWIVEFFAPWCGHCKKLAPEW---KKAANNLKGKVKLGHVDCDSE 221 (428)
Q Consensus 171 ~~~~~~~~~~~~v~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~f~~v~~~~~ 221 (428)
...++++|.||+.||++|+.+.|.+ .++++.+.+++.|..++.+.+
T Consensus 111 -----~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 111 -----VAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp -----CTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred -----CCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 1246899999999999999999999 999999988899999987653
No 353
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.67 E-value=9e-08 Score=78.62 Aligned_cols=91 Identities=12% Similarity=0.225 Sum_probs=75.9
Q ss_pred cCCeEEEEEECCCChh-HhhHHHHHHHHHHHhcC-----CeEEEEEeCCCc----------------------------h
Q 014216 177 SKDLWIVEFFAPWCGH-CKKLAPEWKKAANNLKG-----KVKLGHVDCDSE----------------------------K 222 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~-c~~~~~~~~~~a~~~~~-----~~~f~~v~~~~~----------------------------~ 222 (428)
..++++|.|+++||++ |....+.+.++.+.+.+ .+.+..|+++.. .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3679999999999998 99999999999999864 788888887642 1
Q ss_pred hHhhhcCCCcCc---------------EEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 223 SLMSKFNVQGFP---------------TILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 223 ~~~~~~~v~~~P---------------~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
.+++.|++...| +++++.+++.....+.|..+.++|.+.+.+.+.
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 378899999889 788887777777778888899999999887753
No 354
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.67 E-value=1.6e-08 Score=90.17 Aligned_cols=70 Identities=20% Similarity=0.446 Sum_probs=57.7
Q ss_pred EEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC------CchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCC
Q 014216 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD------SEKSLMSKFNVQGFPTILVFGADKDSPIPYEGART 254 (428)
Q Consensus 181 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~------~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~ 254 (428)
.++.||++||++|+.+.|.|+++|+++. .++|+ ++++++++++|+++|++++ +++ .|.|..+
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i---~G~---~~~G~~~ 267 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII---NGR---TYTGVRS 267 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE---TTE---EEESCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcCCcccCeEEE---CCE---EecCCCC
Confidence 4699999999999999999999997763 34554 2679999999999999655 332 3899999
Q ss_pred HHHHHHHH
Q 014216 255 AGAIESFA 262 (428)
Q Consensus 255 ~~~i~~fi 262 (428)
.+++.+|+
T Consensus 268 ~~~L~~~l 275 (291)
T 3kp9_A 268 LEALAVAS 275 (291)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99999986
No 355
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.66 E-value=1.6e-07 Score=77.80 Aligned_cols=91 Identities=15% Similarity=0.169 Sum_probs=76.2
Q ss_pred CCeEEEEEECCCChh-HhhHHHHHHHHHHHhc-----CCeEEEEEeCCCc----------------------------hh
Q 014216 178 KDLWIVEFFAPWCGH-CKKLAPEWKKAANNLK-----GKVKLGHVDCDSE----------------------------KS 223 (428)
Q Consensus 178 ~~~~~v~f~~~~c~~-c~~~~~~~~~~a~~~~-----~~~~f~~v~~~~~----------------------------~~ 223 (428)
.++++|.|+++||++ |....+.+.++.+.+. ..+.++.|+++.. ..
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 105 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQ 105 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 578999999999998 9999999999999995 4799999887631 15
Q ss_pred HhhhcCCCcCc---------------EEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhh
Q 014216 224 LMSKFNVQGFP---------------TILVFGADKDSPIPYEGARTAGAIESFALEQLET 268 (428)
Q Consensus 224 ~~~~~~v~~~P---------------~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (428)
+++.|++...| +++++.+++.....|.|..+.++|.+.+.+.+..
T Consensus 106 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 165 (171)
T 2rli_A 106 ASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMAA 165 (171)
T ss_dssp HHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 78889998878 8888877777777788989999999998887653
No 356
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.66 E-value=1.1e-07 Score=82.18 Aligned_cols=88 Identities=14% Similarity=0.329 Sum_probs=72.3
Q ss_pred CC-eEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCC-----------------------------CchhHhh
Q 014216 178 KD-LWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCD-----------------------------SEKSLMS 226 (428)
Q Consensus 178 ~~-~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~-----------------------------~~~~~~~ 226 (428)
.+ +++|.||++||+.|+...+.+.++++.+.+. +.|+.|+++ ....+++
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 137 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAK 137 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHH
Confidence 44 5999999999999999999999999999875 999999883 3567899
Q ss_pred hcCCCcCcEEEEEcCCCCCcccccC-----------CCCHHHHHHHHHHHHh
Q 014216 227 KFNVQGFPTILVFGADKDSPIPYEG-----------ARTAGAIESFALEQLE 267 (428)
Q Consensus 227 ~~~v~~~P~i~~~~~~~~~~~~y~g-----------~~~~~~i~~fi~~~~~ 267 (428)
.|++..+|+++++..++. +.|.| ..+.++|.+.|...+.
T Consensus 138 ~~~v~~~P~~~liD~~G~--i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~ 187 (218)
T 3u5r_E 138 AYGAACTPDFFLYDRERR--LVYHGQFDDARPGNGKDVTGADLRAAVDAVLK 187 (218)
T ss_dssp HHTCCEESEEEEECTTCB--EEEEECSSSCCTTSCCCCCCHHHHHHHHHHHT
T ss_pred HcCCCCCCeEEEECCCCc--EEEeccccccccccccccCHHHHHHHHHHHHc
Confidence 999999999999976553 34543 3457888888887764
No 357
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.65 E-value=1.2e-07 Score=80.76 Aligned_cols=90 Identities=11% Similarity=0.088 Sum_probs=67.2
Q ss_pred CCCeEEEEEECCCChh-hhhhhHHHHHHHHHhc----CceEEEEEcCcc----------------------------cHh
Q 014216 47 ANGVVLVEFYAPWCGH-CQALTPIWEKAATVLK----GVATVAALDANE----------------------------HQS 93 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~-C~~~~~~~~~~~~~~~----~~v~~~~vd~~~----------------------------~~~ 93 (428)
.++++||.||++||++ |....|.+.++.+.+. +.+.++.|+++. ...
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 5789999999999997 9999999999877765 357777777662 135
Q ss_pred HHHHcCCc-ccc---------------EEEEE-eCCCCCccccCCCCcchHHHHHHHHHH
Q 014216 94 LAQEYGIR-GFP---------------TIKVF-VPGKPPVDYQGARDVKPIAEFALQQIK 136 (428)
Q Consensus 94 l~~~~~v~-~~P---------------~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~ 136 (428)
+++.||+. +.| +++++ ++|+.+..+.|..+.+.+.+.|.+.+.
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHH
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 77888887 444 55566 667767778888888888888877764
No 358
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.63 E-value=6.4e-08 Score=82.67 Aligned_cols=89 Identities=10% Similarity=0.115 Sum_probs=69.7
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc----------------------------cHhHHH
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 96 (428)
.+++++|.|| ++||++|....+.+.++++++++ .+.++.|+++. ...+++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 4789999999 99999999999999999999875 48888888763 346888
Q ss_pred HcCCc------cccEEEEE-eCCCCCccccCCC----CcchHHHHHHHHH
Q 014216 97 EYGIR------GFPTIKVF-VPGKPPVDYQGAR----DVKPIAEFALQQI 135 (428)
Q Consensus 97 ~~~v~------~~P~~~~~-~~g~~~~~~~g~~----~~~~l~~~i~~~l 135 (428)
.|++. ++|+++++ ++|+....+.|.. +.+++.+.+....
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 99999 99999998 4566555555543 3466776666543
No 359
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.62 E-value=1.5e-07 Score=75.46 Aligned_cols=83 Identities=10% Similarity=0.153 Sum_probs=65.1
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCCch--------------------------hHhhhcC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSEK--------------------------SLMSKFN 229 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~~--------------------------~~~~~~~ 229 (428)
..++++|.||++||++|....+.+.++.+.|.+ .+.+..|+.+.+. .+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 357899999999999999999999999999985 4999988877432 4678899
Q ss_pred CCcCcEEEEEcCCCCCcccccCCCCHHHHHHHH
Q 014216 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFA 262 (428)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi 262 (428)
+..+|+.+++.+++.. .+. ....+++.+++
T Consensus 111 v~~~P~~~lid~~G~i--~~~-~~~~~~l~~~l 140 (143)
T 4fo5_A 111 LRKGFKNFLINDEGVI--IAA-NVTPEKLTEIL 140 (143)
T ss_dssp GGGCCCEEEECTTSBE--EEE-SCCHHHHHHHH
T ss_pred CCCCCcEEEECCCCEE--EEc-cCCHHHHHHHH
Confidence 9999999999766543 332 23466666654
No 360
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.62 E-value=6.3e-08 Score=82.38 Aligned_cols=89 Identities=11% Similarity=0.128 Sum_probs=69.8
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc----------------------------cHhHHH
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 96 (428)
.+++++|.|| ++||++|....+.+.++++++++ .+.++.|+++. ..++++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 4789999999 99999999999999999999875 48888888763 236889
Q ss_pred HcCCc------cccEEEEE-eCCCCCccccCCC----CcchHHHHHHHHH
Q 014216 97 EYGIR------GFPTIKVF-VPGKPPVDYQGAR----DVKPIAEFALQQI 135 (428)
Q Consensus 97 ~~~v~------~~P~~~~~-~~g~~~~~~~g~~----~~~~l~~~i~~~l 135 (428)
.|++. ++|+++++ ++|+....+.|.. +.+.+.+.|....
T Consensus 113 ~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 113 DYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 99998 89998888 5566555555643 4566777776543
No 361
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.62 E-value=1.3e-07 Score=80.03 Aligned_cols=89 Identities=26% Similarity=0.322 Sum_probs=69.9
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCc-------------------------------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN------------------------------------- 89 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~------------------------------------- 89 (428)
..++.|+.|+.+||++|+.+.|.+.++.+.+.+++.|..+...
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~lf~~~~~~~~ 103 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHKEHK 103 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECCCSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTSCC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEehhhccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCc
Confidence 4678999999999999999999999999999887777644431
Q ss_pred ------------------------------------ccHhHHHHcCCccccEEEEEeCCCCCccccCCCCcchHHHHHHH
Q 014216 90 ------------------------------------EHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQ 133 (428)
Q Consensus 90 ------------------------------------~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i~~ 133 (428)
.+...++++||.++|++++ +|+......|..+.+.+.+.|..
T Consensus 104 ~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~v--ng~~~~~~~G~~~~e~l~~~i~~ 181 (192)
T 3h93_A 104 KLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVV--NGKYRFDIGSAGGPEETLKLADY 181 (192)
T ss_dssp CCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEEEHHHHTSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCeEEE--CCEEEecccccCCHHHHHHHHHH
Confidence 0124567789999999876 77655555588888988888887
Q ss_pred HHHH
Q 014216 134 QIKA 137 (428)
Q Consensus 134 ~l~~ 137 (428)
.+..
T Consensus 182 l~~k 185 (192)
T 3h93_A 182 LIEK 185 (192)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 362
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.60 E-value=1.7e-07 Score=77.32 Aligned_cols=87 Identities=20% Similarity=0.212 Sum_probs=66.1
Q ss_pred CCCeEEEEEECCC-ChhhhhhhHHHHHHHHHhcCceEEEEEcCcc-----------------------cHhHHHHcCCcc
Q 014216 47 ANGVVLVEFYAPW-CGHCQALTPIWEKAATVLKGVATVAALDANE-----------------------HQSLAQEYGIRG 102 (428)
Q Consensus 47 ~~~~~lv~f~~~~-C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~l~~~~~v~~ 102 (428)
.+++++|.||++| |++|+...|.+.++.+++ ..+.++.|+.+. +..+++.|++..
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~ 121 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYI 121 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBB
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCcc
Confidence 5789999999999 999999999999999999 667787777652 346788899887
Q ss_pred ------ccEEEEEe-CCCCCccccCC-----CCcchHHHHHHHH
Q 014216 103 ------FPTIKVFV-PGKPPVDYQGA-----RDVKPIAEFALQQ 134 (428)
Q Consensus 103 ------~P~~~~~~-~g~~~~~~~g~-----~~~~~l~~~i~~~ 134 (428)
.|+++++. +|+.+..+.|. .+.+.+.+.+.+.
T Consensus 122 ~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 122 KELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp TTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred ccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 49988884 56655566542 1345666666554
No 363
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.60 E-value=2.1e-08 Score=71.61 Aligned_cols=58 Identities=19% Similarity=0.288 Sum_probs=48.0
Q ss_pred EEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC-CchhHhhhcCCCcCcEEEE
Q 014216 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD-SEKSLMSKFNVQGFPTILV 238 (428)
Q Consensus 181 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~-~~~~~~~~~~v~~~P~i~~ 238 (428)
.++.|+++||++|+.+.+.++++++.+...+.+..++.+ ...++++++|++++|++++
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i 61 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI 61 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE
Confidence 467899999999999999999988776545666666654 4678899999999999887
No 364
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.58 E-value=2.4e-07 Score=75.87 Aligned_cols=77 Identities=14% Similarity=0.147 Sum_probs=64.8
Q ss_pred CCe-EEEEEE-CCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCC---------------------CchhHhhhcCCCc-
Q 014216 178 KDL-WIVEFF-APWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCD---------------------SEKSLMSKFNVQG- 232 (428)
Q Consensus 178 ~~~-~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~---------------------~~~~~~~~~~v~~- 232 (428)
.+. ++|.|| +.||+.|....+.+.++++.+.+. +.+..|+.+ ....+++.|++.+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 107 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGF 107 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCS
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCc
Confidence 444 899999 999999999999999999999875 999998876 4567899999998
Q ss_pred ---CcEEEEEcCCCCCcccccCCCC
Q 014216 233 ---FPTILVFGADKDSPIPYEGART 254 (428)
Q Consensus 233 ---~P~i~~~~~~~~~~~~y~g~~~ 254 (428)
+|+++++.+++.....+.|...
T Consensus 108 ~~~~P~~~lid~~G~i~~~~~g~~~ 132 (161)
T 3drn_A 108 ILPARITFVIDKKGIIRHIYNSQMN 132 (161)
T ss_dssp SSCCCEEEEECTTSBEEEEEECSSC
T ss_pred CcccceEEEECCCCEEEEEEecCCC
Confidence 9999999877766667777443
No 365
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.58 E-value=5.2e-08 Score=72.77 Aligned_cols=78 Identities=10% Similarity=0.102 Sum_probs=61.7
Q ss_pred CCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC--CchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCH
Q 014216 178 KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD--SEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTA 255 (428)
Q Consensus 178 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~--~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~ 255 (428)
+.+.++.|+++||++|+.+.+.+.+++. .+.|..+|.+ .+++++++|| .++|+++ .+ ++ .. ..+..+.
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~----~i~~~~vdi~~~~~~el~~~~g-~~vP~l~--~~-g~-~~-~~~g~~~ 84 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKD----RFILQEVDITLPENSTWYERYK-FDIPVFH--LN-GQ-FL-MMHRVNT 84 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSS----SSEEEEEETTSSTTHHHHHHSS-SSCSEEE--ES-SS-EE-EESSCCH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhh----CCeEEEEECCCcchHHHHHHHC-CCCCEEE--EC-CE-EE-EecCCCH
Confidence 4568899999999999999999987643 3899999998 7789999999 9999763 32 32 22 3466889
Q ss_pred HHHHHHHHHH
Q 014216 256 GAIESFALEQ 265 (428)
Q Consensus 256 ~~i~~fi~~~ 265 (428)
+.|..++.+.
T Consensus 85 ~~l~~~l~~~ 94 (100)
T 1wjk_A 85 SKLEKQLRKL 94 (100)
T ss_dssp HHHHHHHHSS
T ss_pred HHHHHHHHHH
Confidence 9999888654
No 366
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.58 E-value=8.5e-08 Score=83.00 Aligned_cols=88 Identities=11% Similarity=0.182 Sum_probs=68.4
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc----------------------------cHhHHH
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 96 (428)
.++++||.|| +.||++|+...+.+.++++++.+ .+.++.|+++. ...+++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 4689999999 99999999999999999999864 57888887753 346889
Q ss_pred HcCCc------cccEEEEE-eCCCCCccccCCC----CcchHHHHHHHH
Q 014216 97 EYGIR------GFPTIKVF-VPGKPPVDYQGAR----DVKPIAEFALQQ 134 (428)
Q Consensus 97 ~~~v~------~~P~~~~~-~~g~~~~~~~g~~----~~~~l~~~i~~~ 134 (428)
.|++. .+|+++++ ++|+....+.|.. +.+++.+.|...
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l 183 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAF 183 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 99999 99999999 5666555555543 345666666544
No 367
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.57 E-value=2.5e-07 Score=78.31 Aligned_cols=88 Identities=16% Similarity=0.182 Sum_probs=67.8
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc----------------------------cHhHHH
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 96 (428)
++++++|.|| ++||++|....|.+.++++++.+ .+.++.|+++. +..+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 5789999999 99999999999999999998863 47788887753 246889
Q ss_pred HcCCc-----cccEEEEE-eCCCCCccccCCC----CcchHHHHHHHH
Q 014216 97 EYGIR-----GFPTIKVF-VPGKPPVDYQGAR----DVKPIAEFALQQ 134 (428)
Q Consensus 97 ~~~v~-----~~P~~~~~-~~g~~~~~~~g~~----~~~~l~~~i~~~ 134 (428)
.||+. .+|+++++ ++|+....+.|.. +.+.+.+.|...
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 99999 89999999 5666555555543 345565555543
No 368
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.56 E-value=4.1e-07 Score=77.14 Aligned_cols=43 Identities=23% Similarity=0.422 Sum_probs=38.4
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN 89 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~ 89 (428)
..+++|+.||++||++|+++.|.+.++.+.+.+++.|..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 4788999999999999999999999999999887888777763
No 369
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.56 E-value=1.3e-07 Score=81.40 Aligned_cols=88 Identities=14% Similarity=0.168 Sum_probs=67.8
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc----------------------------cHhHHH
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 96 (428)
+++++||.|| ++||++|....|.+.++++++++ .+.++.|+++. +.++++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 5789999999 99999999999999999999863 57777777653 346889
Q ss_pred HcCCc-----cccEEEEEe-CCCCCccccCCC----CcchHHHHHHHH
Q 014216 97 EYGIR-----GFPTIKVFV-PGKPPVDYQGAR----DVKPIAEFALQQ 134 (428)
Q Consensus 97 ~~~v~-----~~P~~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~ 134 (428)
.|++. .+|+++++. +|+....+.|.. +.+.+.+.|...
T Consensus 131 ~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 131 DYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 99999 899998884 565555544433 456677776654
No 370
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.53 E-value=1.9e-07 Score=80.99 Aligned_cols=79 Identities=15% Similarity=0.226 Sum_probs=63.3
Q ss_pred CCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhcCc-eEEEEEcCcc----------------------------cHhHHH
Q 014216 47 ANGVVLVEFYA-PWCGHCQALTPIWEKAATVLKGV-ATVAALDANE----------------------------HQSLAQ 96 (428)
Q Consensus 47 ~~~~~lv~f~~-~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~----------------------------~~~l~~ 96 (428)
.++++||.||+ .||++|....|.+.++.++++++ +.++.|+++. +..+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 57899999996 99999999999999999999763 8888888763 236788
Q ss_pred HcCCc------cccEEEEE-eCCCCCccccCCCCcc
Q 014216 97 EYGIR------GFPTIKVF-VPGKPPVDYQGARDVK 125 (428)
Q Consensus 97 ~~~v~------~~P~~~~~-~~g~~~~~~~g~~~~~ 125 (428)
.|++. .+|+++++ ++|+.+..+.|....+
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~ 183 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVG 183 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBC
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCCCCC
Confidence 89998 89999999 4666566666654443
No 371
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.51 E-value=2.6e-07 Score=76.88 Aligned_cols=86 Identities=15% Similarity=0.174 Sum_probs=65.8
Q ss_pred CCCeEEEEEECCC-ChhhhhhhHHHHHHHHHhcCceEEEEEcCcc----------------------cHhHHHHcCCccc
Q 014216 47 ANGVVLVEFYAPW-CGHCQALTPIWEKAATVLKGVATVAALDANE----------------------HQSLAQEYGIRGF 103 (428)
Q Consensus 47 ~~~~~lv~f~~~~-C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~----------------------~~~l~~~~~v~~~ 103 (428)
++++++|.||+.| |++|+...|.+.++.++ ..+.++.|+.+. +..+++.|++...
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~ 120 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIA 120 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBC
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCccc
Confidence 4789999999999 99999999999999988 457788887761 2468889999887
Q ss_pred ---------cEEEEEe-CCCCCcccc--CCCCcchHHHHHHHH
Q 014216 104 ---------PTIKVFV-PGKPPVDYQ--GARDVKPIAEFALQQ 134 (428)
Q Consensus 104 ---------P~~~~~~-~g~~~~~~~--g~~~~~~l~~~i~~~ 134 (428)
|+.+++. +|+.+..+. +......+.+++...
T Consensus 121 ~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l 163 (175)
T 1xvq_A 121 DGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAAL 163 (175)
T ss_dssp SSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHH
T ss_pred ccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHH
Confidence 8888884 666555554 333455677777654
No 372
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.51 E-value=1.9e-07 Score=81.92 Aligned_cols=85 Identities=16% Similarity=0.250 Sum_probs=63.6
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcC---------------------------------------
Q 014216 48 NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA--------------------------------------- 88 (428)
Q Consensus 48 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~--------------------------------------- 88 (428)
.+.+|+.|+.+||++|+++.+.+.++.+. +++.+..+..
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~ 174 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVP 174 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCcc
Confidence 45689999999999999999999887775 4555543322
Q ss_pred -----------cccHhHHHHcCCccccEEEEEeC-CCCCccccCCCCcchHHHHHHHHH
Q 014216 89 -----------NEHQSLAQEYGIRGFPTIKVFVP-GKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 89 -----------~~~~~l~~~~~v~~~P~~~~~~~-g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
+++.++++++||+++|++++... |+ +....|..+.+.|.++|.+..
T Consensus 175 ~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~-~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 175 ANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENT-LQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTE-EEEEESSCCHHHHHHHTTC--
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC-EEEecCCCCHHHHHHHHHHHH
Confidence 13346788999999999888753 53 356789999999988887654
No 373
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.50 E-value=4.6e-07 Score=76.49 Aligned_cols=91 Identities=16% Similarity=0.159 Sum_probs=72.6
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCC--------ch---hHh-hh----------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS--------EK---SLM-SK---------------- 227 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~--------~~---~~~-~~---------------- 227 (428)
..++++|.|+++||+.|....+.+.++.+.+.++ +.++.|+++. .+ .++ ++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 4578999999999999999999999999999875 9999998762 11 222 22
Q ss_pred -------------cCCCcCc------EEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 228 -------------FNVQGFP------TILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 228 -------------~~v~~~P------~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
+++..+| +++++.+++.....+.|..+.+.+.+.|.+.+.
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 3677788 888887777767777888899999999888764
No 374
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.49 E-value=3.5e-07 Score=75.02 Aligned_cols=77 Identities=8% Similarity=0.109 Sum_probs=59.8
Q ss_pred CCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc---------------------cHhHHHHcCCcc-
Q 014216 47 ANGVVLVEFYA-PWCGHCQALTPIWEKAATVLKG-VATVAALDANE---------------------HQSLAQEYGIRG- 102 (428)
Q Consensus 47 ~~~~~lv~f~~-~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~---------------------~~~l~~~~~v~~- 102 (428)
.+++++|.||+ .||++|....|.+.++.+++++ .+.++.|.++. ...+++.||+..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 46799999998 9999999999999999998875 37777777762 236778888877
Q ss_pred -----------ccEEEEEe-CCCCCccccCCCC
Q 014216 103 -----------FPTIKVFV-PGKPPVDYQGARD 123 (428)
Q Consensus 103 -----------~P~~~~~~-~g~~~~~~~g~~~ 123 (428)
.|+.+++. +|+....+.|...
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~ 146 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKV 146 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCEEEEECSCCS
T ss_pred cccccccccCcceEEEEECCCCeEEEEEcCCCc
Confidence 89999995 5655555644433
No 375
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.49 E-value=1.3e-07 Score=78.24 Aligned_cols=88 Identities=17% Similarity=0.224 Sum_probs=70.3
Q ss_pred cCCeEEEEEECCCChh-HhhHHHHHHHHHHHhcC----CeEEEEEeCCCc----------------------------hh
Q 014216 177 SKDLWIVEFFAPWCGH-CKKLAPEWKKAANNLKG----KVKLGHVDCDSE----------------------------KS 223 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~-c~~~~~~~~~~a~~~~~----~~~f~~v~~~~~----------------------------~~ 223 (428)
..++++|.||++||++ |....+.+.++.+.+.+ .+.+..|+++.. ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4578999999999997 99999999999999974 699999987642 24
Q ss_pred HhhhcC---------------CCcCcEEEEEcCCCCCcccccCCC--CHHHHHHHHHHH
Q 014216 224 LMSKFN---------------VQGFPTILVFGADKDSPIPYEGAR--TAGAIESFALEQ 265 (428)
Q Consensus 224 ~~~~~~---------------v~~~P~i~~~~~~~~~~~~y~g~~--~~~~i~~fi~~~ 265 (428)
+++.|+ +..+|+++++. ++.....+.|.. +.++|.+.+.+.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 555555 45789999999 776666777777 888888887653
No 376
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.48 E-value=3.2e-07 Score=75.98 Aligned_cols=89 Identities=12% Similarity=0.166 Sum_probs=69.7
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCC-------Cc----hhHh-------------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCD-------SE----KSLM------------------- 225 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~-------~~----~~~~------------------- 225 (428)
..++++|.||++||+.|+ ..+.+.++.+.+.+. +.+..|+++ .+ ..++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 467999999999999999 999999999999875 888888763 10 1122
Q ss_pred -----------hhcCCCcCc------EEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 226 -----------SKFNVQGFP------TILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 226 -----------~~~~v~~~P------~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+.|++..+| +++++.+++.....+.|..+.+.+.+.+.+.+
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 167 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELL 167 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHH
Confidence 246788889 88888777776777788889999999887765
No 377
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.87 E-value=1.7e-08 Score=82.68 Aligned_cols=87 Identities=18% Similarity=0.251 Sum_probs=63.6
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHH-HHHHhc--CCeEEEEEeCCCchhHhhhcC------------------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKK-AANNLK--GKVKLGHVDCDSEKSLMSKFN------------------------ 229 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~-~a~~~~--~~~~f~~v~~~~~~~~~~~~~------------------------ 229 (428)
.+++++|.||++||++|+...+.+.+ +...+. ..+.++.|+++...+.+++|.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 35689999999999999999999998 888876 468888888776554444433
Q ss_pred CCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHH
Q 014216 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFALE 264 (428)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 264 (428)
+.++|+++++..++.....+.| .+.+++.+++.+
T Consensus 112 ~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~ 145 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQ 145 (159)
Confidence 5668999999666655555555 455566655543
No 378
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.48 E-value=2.8e-07 Score=64.69 Aligned_cols=68 Identities=18% Similarity=0.341 Sum_probs=50.7
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHH---HcCCccccEEEEEeCCCCCccccCCCCcchHH
Q 014216 52 LVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQ---EYGIRGFPTIKVFVPGKPPVDYQGARDVKPIA 128 (428)
Q Consensus 52 lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~---~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~ 128 (428)
++.|+++||++|+++.+.+++. .+.+..+|++.++.+.+ ++++.++|++++ +|+. ..| .+.+.+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~---~~g-~~~~~l~ 70 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH---WSG-FRPERIK 70 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE---EES-CCHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE---EcC-CCHHHHH
Confidence 6789999999999999988764 26677788887766655 899999999863 5542 333 4566666
Q ss_pred HHH
Q 014216 129 EFA 131 (428)
Q Consensus 129 ~~i 131 (428)
+++
T Consensus 71 ~~l 73 (75)
T 1r7h_A 71 QLQ 73 (75)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 379
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.47 E-value=3.3e-07 Score=66.06 Aligned_cols=76 Identities=25% Similarity=0.314 Sum_probs=58.8
Q ss_pred EEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCch----hHhhhcC--CCcCcEEEEEcCCCCCcccccCCCC
Q 014216 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEK----SLMSKFN--VQGFPTILVFGADKDSPIPYEGART 254 (428)
Q Consensus 181 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~----~~~~~~~--v~~~P~i~~~~~~~~~~~~y~g~~~ 254 (428)
.++.|+++||++|+.+.+.+++++..+. .+.|..+|.+.++ ++.+++| +.++|++. + +++ .+ |.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~-~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~-~--~g~-~i---~~-- 71 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERD-DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIF-V--DQQ-HI---GG-- 71 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHS-SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEE-E--TTE-EE---ES--
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCC-CceEEEEecccChHHHHHHHHHhCCCCceeCeEE-E--CCE-EE---EC--
Confidence 4688999999999999999999998876 4889999876543 7888999 89999983 3 232 21 22
Q ss_pred HHHHHHHHHHHH
Q 014216 255 AGAIESFALEQL 266 (428)
Q Consensus 255 ~~~i~~fi~~~~ 266 (428)
.++|..++.+++
T Consensus 72 ~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 YTDFAAWVKENL 83 (85)
T ss_dssp SHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 367888877764
No 380
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.47 E-value=6.4e-07 Score=73.86 Aligned_cols=91 Identities=16% Similarity=0.232 Sum_probs=70.0
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCC-------c-h---hH-hhhc---------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS-------E-K---SL-MSKF--------------- 228 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~-------~-~---~~-~~~~--------------- 228 (428)
..++++|.||++||+.|....+.+.++.+.+.++ +.+..|+++. . . .. .+++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 4579999999999999999999999999999874 9999998752 1 1 22 1222
Q ss_pred --------------C-----CCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 229 --------------N-----VQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 229 --------------~-----v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
| ++.+|+++++.+++.....+.|..+.+.+...|.+.+.
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 167 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLE 167 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhc
Confidence 3 33457888887777767778888888889888877653
No 381
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.47 E-value=1.9e-07 Score=77.55 Aligned_cols=89 Identities=19% Similarity=0.246 Sum_probs=65.1
Q ss_pred CCCeEEEEEECCCCh-hhhhhhHHHHHHHHHhcC---ceEEEEEcCcc---c-------------------------HhH
Q 014216 47 ANGVVLVEFYAPWCG-HCQALTPIWEKAATVLKG---VATVAALDANE---H-------------------------QSL 94 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~-~C~~~~~~~~~~~~~~~~---~v~~~~vd~~~---~-------------------------~~l 94 (428)
.+++++|.||++||+ +|....+.+.++.+.++. ++.++.|+++. . ..+
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 578999999999999 999999999999988875 38888888762 1 122
Q ss_pred HHHc----------------CCccccEEEEE-eCCCCCccccCCC--CcchHHHHHHHHH
Q 014216 95 AQEY----------------GIRGFPTIKVF-VPGKPPVDYQGAR--DVKPIAEFALQQI 135 (428)
Q Consensus 95 ~~~~----------------~v~~~P~~~~~-~~g~~~~~~~g~~--~~~~l~~~i~~~l 135 (428)
.+.| ++.+.|+++++ ++|+.+..+.|.. +.+.+.+.|.+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll 171 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAS 171 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHT
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHH
Confidence 2222 34568887777 5666666777876 3567777776653
No 382
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.44 E-value=4.6e-07 Score=76.79 Aligned_cols=89 Identities=11% Similarity=0.128 Sum_probs=73.6
Q ss_pred CCeEEEEEE-CCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCC-------------------------chhHhhhcCC
Q 014216 178 KDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS-------------------------EKSLMSKFNV 230 (428)
Q Consensus 178 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~-------------------------~~~~~~~~~v 230 (428)
.++++|.|| ++||+.|....+.+.++.+.+.+ .+.+..|+.+. ...+++.|++
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 124 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGV 124 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTC
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCC
Confidence 578999999 99999999999999999999986 58999888764 3467888999
Q ss_pred C-----cCcEEEEEcCCCCCcccccCCC----CHHHHHHHHHHHH
Q 014216 231 Q-----GFPTILVFGADKDSPIPYEGAR----TAGAIESFALEQL 266 (428)
Q Consensus 231 ~-----~~P~i~~~~~~~~~~~~y~g~~----~~~~i~~fi~~~~ 266 (428)
. .+|+++++..++.....+.|.. +.+++.+.+.+..
T Consensus 125 ~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 169 (195)
T 2bmx_A 125 LNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQ 169 (195)
T ss_dssp BCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred cccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 9 8999999977776556666654 6788888887764
No 383
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.44 E-value=1.9e-06 Score=66.69 Aligned_cols=97 Identities=14% Similarity=0.160 Sum_probs=78.2
Q ss_pred CCCcEEeCc-cchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHcCCccccEEE
Q 014216 29 SSPVVQLTP-NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (428)
Q Consensus 29 ~~~~~~l~~-~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P~~~ 107 (428)
...+..|+. ++++ .++..+++++|-|+.+||..| .+.|.++++.+ +.+.|+.++ ++++++++++. .|+++
T Consensus 20 ~~~~~~i~s~~e~e-~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~---~~~v~~~~~v~-~~~vv 90 (124)
T 2l4c_A 20 AQEPTWLTDVPAAM-EFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGIST---DSEVLTHYNIT-GNTIC 90 (124)
T ss_dssp SCCCEECCSHHHHH-HHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEEC---CHHHHHHTTCC-SSCEE
T ss_pred CCcceEcCCHHHHH-HHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEEC---hHHHHHHcCCC-CCeEE
Confidence 344555654 4566 566778999999999999999 67899999999 778998876 47799999998 89999
Q ss_pred EEeCCCC-CccccC----CCCcchHHHHHHHH
Q 014216 108 VFVPGKP-PVDYQG----ARDVKPIAEFALQQ 134 (428)
Q Consensus 108 ~~~~g~~-~~~~~g----~~~~~~l~~~i~~~ 134 (428)
+|++... ...|.| ..+.+.|.+||...
T Consensus 91 lfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 91 LFRLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp EEETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EEEcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 9998653 567776 68999999999764
No 384
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=97.81 E-value=2.4e-08 Score=79.99 Aligned_cols=67 Identities=19% Similarity=0.466 Sum_probs=56.3
Q ss_pred CC-eEEEEEECCCChhHhhHHHHHHHHHHHhc---CCeEEEEEeCCCc-------------------------hhHhhhc
Q 014216 178 KD-LWIVEFFAPWCGHCKKLAPEWKKAANNLK---GKVKLGHVDCDSE-------------------------KSLMSKF 228 (428)
Q Consensus 178 ~~-~~~v~f~~~~c~~c~~~~~~~~~~a~~~~---~~~~f~~v~~~~~-------------------------~~~~~~~ 228 (428)
++ +++|.||++||++|+...+.+.++++.++ ..+.++.|+++.. ..++++|
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 45 89999999999999999999999999983 3577887777654 3688999
Q ss_pred CCCcCcEEEEEcCCCC
Q 014216 229 NVQGFPTILVFGADKD 244 (428)
Q Consensus 229 ~v~~~P~i~~~~~~~~ 244 (428)
++.++|+++++..++.
T Consensus 105 ~v~~~P~~~lid~~G~ 120 (143)
T 2lus_A 105 GITGIPALVIVKKDGT 120 (143)
Confidence 9999999999975553
No 385
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.43 E-value=5.4e-07 Score=74.38 Aligned_cols=90 Identities=12% Similarity=0.224 Sum_probs=70.8
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCC--------c---hhHhh-hc---------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS--------E---KSLMS-KF--------------- 228 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~--------~---~~~~~-~~--------------- 228 (428)
..++++|.||++||+.|....+.+.++++.+.++ +.++.|+++. . ...++ ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 4679999999999999999999999999999875 9999998752 1 12233 32
Q ss_pred --------------CC--CcCc---EEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 229 --------------NV--QGFP---TILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 229 --------------~v--~~~P---~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
++ ..+| +++++.+++.....+.|..+.+.+...+.+.+
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 167 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLL 167 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHT
T ss_pred chHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHh
Confidence 34 5568 88888777766677788888888988887765
No 386
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.42 E-value=1.1e-07 Score=71.79 Aligned_cols=60 Identities=20% Similarity=0.290 Sum_probs=44.5
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCccc-------HhHHHHcCCccccEEEEEeCCCCC
Q 014216 51 VLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEH-------QSLAQEYGIRGFPTIKVFVPGKPP 115 (428)
Q Consensus 51 ~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~-------~~l~~~~~v~~~P~~~~~~~g~~~ 115 (428)
.++.|+++||++|+++.+.+.++...+++ +..+|++.+ ..+.+.+|+.++|++ |.+|+.+
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~~~g~~i 79 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEGL---LEFVDITATSDTNEIQDYLQQLTGARTVPRV--FIGKECI 79 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTTS---EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--EETTEEE
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCCc---cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--EECCEEE
Confidence 36779999999999999999876554432 444566654 357888999999997 3466543
No 387
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.42 E-value=8.4e-08 Score=73.89 Aligned_cols=79 Identities=13% Similarity=0.191 Sum_probs=53.7
Q ss_pred CeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCc-----hhHhhhcCCCcCcEEEEEcCCCCCcccccCCC
Q 014216 179 DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSE-----KSLMSKFNVQGFPTILVFGADKDSPIPYEGAR 253 (428)
Q Consensus 179 ~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~-----~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~ 253 (428)
+++++ |+++||++|+.+.+.+.+++. .+.+..|+.+.. ..+++++++.++|++ +. +++....+.|..
T Consensus 20 ~~vv~-f~a~~C~~C~~~~~~l~~~~~----~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~-~~--~g~~v~~~~~~~ 91 (116)
T 2e7p_A 20 APVVV-FSKTYCGYCNRVKQLLTQVGA----SYKVVELDELSDGSQLQSALAHWTGRGTVPNV-FI--GGKQIGGCDTVV 91 (116)
T ss_dssp SSEEE-EECTTCHHHHHHHHHHHHHTC----CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE-EE--TTEEEECHHHHH
T ss_pred CCEEE-EECCCChhHHHHHHHHHHcCC----CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE-EE--CCEEECChHHHH
Confidence 34444 999999999999999988754 356666665554 468999999999999 43 333333333332
Q ss_pred ---CHHHHHHHHHHH
Q 014216 254 ---TAGAIESFALEQ 265 (428)
Q Consensus 254 ---~~~~i~~fi~~~ 265 (428)
+.+.|..++.+.
T Consensus 92 ~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 92 EKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHHTTCHHHHHHHT
T ss_pred HHHhCChHHHHHHHc
Confidence 445566666554
No 388
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.41 E-value=5.7e-08 Score=74.58 Aligned_cols=62 Identities=19% Similarity=0.193 Sum_probs=46.2
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccH-------hHHHHcCCccccEEEEEeCCCCC
Q 014216 49 GVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQ-------SLAQEYGIRGFPTIKVFVPGKPP 115 (428)
Q Consensus 49 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-------~l~~~~~v~~~P~~~~~~~g~~~ 115 (428)
...++.|+++||++|+++.+.+.+..... +. +..+|++.++ .+.+.+|+.++|++++ +|+.+
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~~i 86 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKFSFKR-GA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKTSI 86 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTSCBCT-TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTEEE
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHcCCCc-Cc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCEEE
Confidence 34578899999999999999887643321 12 6777887663 7888999999999743 66544
No 389
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.41 E-value=4.3e-07 Score=76.40 Aligned_cols=91 Identities=18% Similarity=0.154 Sum_probs=74.0
Q ss_pred cCCeEEEEEE-CCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCC-------------------------chhHhhhcC
Q 014216 177 SKDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS-------------------------EKSLMSKFN 229 (428)
Q Consensus 177 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~-------------------------~~~~~~~~~ 229 (428)
..++++|.|| ++||+.|....+.+.++++.+.+ .+.+..|+.+. +..+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 3578999999 99999999999999999999976 58888888764 346788999
Q ss_pred CC------cCcEEEEEcCCCCCcccccCCC----CHHHHHHHHHHHHh
Q 014216 230 VQ------GFPTILVFGADKDSPIPYEGAR----TAGAIESFALEQLE 267 (428)
Q Consensus 230 v~------~~P~i~~~~~~~~~~~~y~g~~----~~~~i~~fi~~~~~ 267 (428)
+. .+|+++++..++.....+.|.. +.++|.+.+.....
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 98 8999999976766555666653 67888888876653
No 390
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.39 E-value=2.4e-07 Score=66.16 Aligned_cols=68 Identities=15% Similarity=0.244 Sum_probs=48.7
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHH---HcCCccccEEEEEeCCCCCccccCCCCcchHH
Q 014216 52 LVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQ---EYGIRGFPTIKVFVPGKPPVDYQGARDVKPIA 128 (428)
Q Consensus 52 lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~---~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~ 128 (428)
++.|+++||++|+++.+.+.+. .+.+..+|+++++++.+ ++|+.++|+++ .+|+. ..| .+.+.+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~--~~g~~---~~g-~~~~~l~ 70 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQGFRQLPVVI--AGDLS---WSG-FRPDMIN 70 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCCSSCEEE--ETTEE---EES-CCHHHHG
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhCCCccCEEE--ECCEE---Eec-CCHHHHH
Confidence 6789999999999999988763 25677889887765544 58999999983 46643 223 4455555
Q ss_pred HHH
Q 014216 129 EFA 131 (428)
Q Consensus 129 ~~i 131 (428)
+++
T Consensus 71 ~~l 73 (81)
T 1h75_A 71 RLH 73 (81)
T ss_dssp GGS
T ss_pred HHH
Confidence 444
No 391
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.39 E-value=1e-06 Score=71.93 Aligned_cols=81 Identities=19% Similarity=0.165 Sum_probs=59.5
Q ss_pred CCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcc---------------------cHhHHHHcCCcccc-
Q 014216 48 NGVVLVEFY-APWCGHCQALTPIWEKAATVLKGVATVAALDANE---------------------HQSLAQEYGIRGFP- 104 (428)
Q Consensus 48 ~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~---------------------~~~l~~~~~v~~~P- 104 (428)
+++++|.|| +.||++|....|.+.++.++++++-.++.|.++. +..+++.||+...|
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~ 114 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPL 114 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSSS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCccccc
Confidence 347889987 9999999999999999999887532566666542 33688889999998
Q ss_pred ------EEEEEeCCCCCccccCCCCcchHHH
Q 014216 105 ------TIKVFVPGKPPVDYQGARDVKPIAE 129 (428)
Q Consensus 105 ------~~~~~~~g~~~~~~~g~~~~~~l~~ 129 (428)
++++ ++|+....+.|.........
T Consensus 115 ~g~~~~~~li-~~G~i~~~~~g~~~~~~~~~ 144 (159)
T 2a4v_A 115 SGSIRSHFIF-VDGKLKFKRVKISPEVSVND 144 (159)
T ss_dssp SCBCCEEEEE-ETTEEEEEEESCCHHHHHHH
T ss_pred CCccceEEEE-cCCEEEEEEccCCccccHHH
Confidence 5555 88877667777654433333
No 392
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.38 E-value=3.5e-07 Score=77.76 Aligned_cols=90 Identities=14% Similarity=0.159 Sum_probs=73.2
Q ss_pred cCCeEEEEEE-CCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCC----------------------------chhHhh
Q 014216 177 SKDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS----------------------------EKSLMS 226 (428)
Q Consensus 177 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~----------------------------~~~~~~ 226 (428)
..++++|.|| ++||+.|....+.+.++++.+.+ .+.+..|+.+. +..+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 3578999999 99999999999999999999976 48888888764 346888
Q ss_pred hcCCC-----cCcEEEEEcCCCCCcccccCCC----CHHHHHHHHHHHH
Q 014216 227 KFNVQ-----GFPTILVFGADKDSPIPYEGAR----TAGAIESFALEQL 266 (428)
Q Consensus 227 ~~~v~-----~~P~i~~~~~~~~~~~~y~g~~----~~~~i~~fi~~~~ 266 (428)
.|++. .+|+++++.+++.....+.|.. +.++|.+.+....
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99998 8999999987776555666654 5788888877664
No 393
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.36 E-value=1.5e-06 Score=74.48 Aligned_cols=88 Identities=15% Similarity=0.088 Sum_probs=65.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc-----------cHhHHH------HcCCc-------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE-----------HQSLAQ------EYGIR------- 101 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~-----------~~~l~~------~~~v~------- 101 (428)
+++++||.||++||++|+ ..|.|.++.+++++ .+.++.|+|+. -.++++ ++++.
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fpll~d~ 133 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKG 133 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBCCC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHHHHHHHHHhccchhccCccceeEeee
Confidence 578999999999999999 88999999999875 48888887752 134555 55431
Q ss_pred ------------------------------------------cccEEEEE-eCCCCCccccCCCCcchHHHHHHHHH
Q 014216 102 ------------------------------------------GFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (428)
Q Consensus 102 ------------------------------------------~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l 135 (428)
..|+.+++ ++|+.+.+|.|..+.+.+...|.+.+
T Consensus 134 d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~~~g~~~~~~l~~~I~~ll 210 (215)
T 2i3y_A 134 DVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYL 210 (215)
T ss_dssp CSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHG
T ss_pred ccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 01566666 56776778888888888877777664
No 394
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.35 E-value=7.4e-07 Score=74.55 Aligned_cols=89 Identities=11% Similarity=0.127 Sum_probs=67.6
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCC-------c-h---hHhhh-c---------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS-------E-K---SLMSK-F--------------- 228 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~-------~-~---~~~~~-~--------------- 228 (428)
..++++|.||++||+.|....+.+.++++.+.++ +.+..|+++. + + ..+++ +
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 3579999999999999999999999999999875 9999998753 1 1 22333 2
Q ss_pred --------CCCcCc-------EEEEEcCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 229 --------NVQGFP-------TILVFGADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 229 --------~v~~~P-------~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
++..+| +.+++.+++.....+.|..+.++|.+.|.+.
T Consensus 128 ~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 179 (181)
T 2p31_A 128 GAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITAL 179 (181)
T ss_dssp TSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTT
T ss_pred cchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHH
Confidence 234567 7777776676666778888888888877654
No 395
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.34 E-value=1.3e-06 Score=71.21 Aligned_cols=84 Identities=8% Similarity=0.101 Sum_probs=66.2
Q ss_pred CeEEEEEE-CCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCC-----------------------chhHhhhcCCC--
Q 014216 179 DLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS-----------------------EKSLMSKFNVQ-- 231 (428)
Q Consensus 179 ~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~-----------------------~~~~~~~~~v~-- 231 (428)
++++|.|| ++||+.|....+.+.++++.+.+ .+.+..|+++. +..+++.|++.
T Consensus 37 ~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~ 116 (160)
T 1xvw_A 37 KNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNE 116 (160)
T ss_dssp CEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEET
T ss_pred CCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCccc
Confidence 38999998 99999999999999999999976 58899888764 56788999998
Q ss_pred --cCc--EEEEEcCCCCCcccccCCCC----HHHHHHHH
Q 014216 232 --GFP--TILVFGADKDSPIPYEGART----AGAIESFA 262 (428)
Q Consensus 232 --~~P--~i~~~~~~~~~~~~y~g~~~----~~~i~~fi 262 (428)
++| +++++..++.....+.|..+ .+++.+.+
T Consensus 117 ~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l 155 (160)
T 1xvw_A 117 QAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDAL 155 (160)
T ss_dssp TTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHH
T ss_pred cCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHH
Confidence 888 88888766665566666543 34444444
No 396
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.34 E-value=2.1e-06 Score=73.24 Aligned_cols=91 Identities=12% Similarity=0.007 Sum_probs=67.9
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc-----------cHhHHH------HcCCc-------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE-----------HQSLAQ------EYGIR------- 101 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~-----------~~~l~~------~~~v~------- 101 (428)
+++++||.||++||++| ...|.|.++.+++++ .+.++.|+++. ..++++ ++++.
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fp~l~d~ 115 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKG 115 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBCCC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHHHHHHHHHhcchhhccCccceeeeEe
Confidence 57899999999999999 678999999999976 38888887641 134555 55431
Q ss_pred ------------------------------------------cccEEEEE-eCCCCCccccCCCCcchHHHHHHHHHHHH
Q 014216 102 ------------------------------------------GFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQIKAL 138 (428)
Q Consensus 102 ------------------------------------------~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~i~~~l~~~ 138 (428)
..|+.+++ ++|+.+.+|.|..+.+.+...|.+.+...
T Consensus 116 d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~~~g~~~~~~l~~~I~~ll~~~ 195 (207)
T 2r37_A 116 DVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRRQ 195 (207)
T ss_dssp CSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHHHHH
T ss_pred ccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHhhc
Confidence 01566777 56776778888888888888888777543
No 397
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.33 E-value=2.8e-07 Score=72.41 Aligned_cols=67 Identities=19% Similarity=0.311 Sum_probs=45.6
Q ss_pred cchHHHhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCccc---H----hHHHHcCCccccEEEEEe
Q 014216 38 NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEH---Q----SLAQEYGIRGFPTIKVFV 110 (428)
Q Consensus 38 ~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~----~l~~~~~v~~~P~~~~~~ 110 (428)
+.+. .++..+. ++.|+++||++|+++.+.|.++. +.+..+|++.. + .+.+.+++.++|+++ .
T Consensus 18 ~~~~-~~i~~~~--vvvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~--i 86 (130)
T 2cq9_A 18 NQIQ-ETISDNC--VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--V 86 (130)
T ss_dssp HHHH-HHHHHSS--EEEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE--E
T ss_pred HHHH-HHHcCCc--EEEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE--E
Confidence 3444 3333343 44499999999999999998753 33445566544 3 378889999999974 3
Q ss_pred CCCCC
Q 014216 111 PGKPP 115 (428)
Q Consensus 111 ~g~~~ 115 (428)
+|+.+
T Consensus 87 ~G~~i 91 (130)
T 2cq9_A 87 NGTFI 91 (130)
T ss_dssp TTEEE
T ss_pred CCEEE
Confidence 66543
No 398
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.30 E-value=2.5e-06 Score=72.98 Aligned_cols=90 Identities=13% Similarity=0.096 Sum_probs=67.6
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCC--------chh---Hhh------hcCC--------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS--------EKS---LMS------KFNV-------- 230 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~--------~~~---~~~------~~~v-------- 230 (428)
..++++|.||++||++|+...+.+.+++++|.+. +.+..|+++. .+. .++ ++++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~d~ 125 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKC 125 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBCCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHHHHHHHHHhcccccccccceEEEEEe
Confidence 3578999999999999999999999999999875 9999998751 122 222 3332
Q ss_pred ---------------------------------------------CcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 231 ---------------------------------------------QGFPTILVFGADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 231 ---------------------------------------------~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
...|+.+++.+++.....|.|..+.++|...|...
T Consensus 126 d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~~l 205 (208)
T 2f8a_A 126 EVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEAL 205 (208)
T ss_dssp CCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHH
T ss_pred ecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 22377888877776667778888888888877665
Q ss_pred H
Q 014216 266 L 266 (428)
Q Consensus 266 ~ 266 (428)
+
T Consensus 206 l 206 (208)
T 2f8a_A 206 L 206 (208)
T ss_dssp H
T ss_pred h
Confidence 4
No 399
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.30 E-value=2.1e-06 Score=72.10 Aligned_cols=91 Identities=14% Similarity=0.125 Sum_probs=70.3
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCC--------chhHh---h-h----------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS--------EKSLM---S-K---------------- 227 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~--------~~~~~---~-~---------------- 227 (428)
..++++|.||++||++|....+.+.++.+.+.+. +.+..|+++. .+.+. + +
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 4578999999999999999999999999999875 8888887651 11211 1 1
Q ss_pred ----------------cCCCcCc---EEEEEcCCCCCcccccCCCCHHHHHHHHHHHHh
Q 014216 228 ----------------FNVQGFP---TILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (428)
Q Consensus 228 ----------------~~v~~~P---~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (428)
+++..+| +++++.+++.....+.|..+.+.|.+.|.+.+.
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC-
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 1334566 888987777767778898999999999887753
No 400
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.26 E-value=6.2e-06 Score=69.61 Aligned_cols=42 Identities=29% Similarity=0.534 Sum_probs=36.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcC
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA 88 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~ 88 (428)
..++.||.|++.||++|+++.|.+.++.+.+.+++.|..+.+
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecC
Confidence 367899999999999999999999999998887777765554
No 401
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.25 E-value=1.7e-06 Score=72.42 Aligned_cols=87 Identities=11% Similarity=0.083 Sum_probs=64.2
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCC-------c-h---hHhhhc----------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS-------E-K---SLMSKF---------------- 228 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~-------~-~---~~~~~~---------------- 228 (428)
..++++|.||++||+.|....+.+.++.+.+.++ +.+..|+++. + + .+++++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 3578999999999999999999999999999874 9999998752 1 1 122222
Q ss_pred ---------------C-----CCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHH
Q 014216 229 ---------------N-----VQGFPTILVFGADKDSPIPYEGARTAGAIESFAL 263 (428)
Q Consensus 229 ---------------~-----v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~ 263 (428)
+ ++.+|+++++..++.....+.|..+.++|...|.
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 180 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLP 180 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSG
T ss_pred hhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHH
Confidence 2 2234888888767766667778777777766543
No 402
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.25 E-value=5e-06 Score=69.26 Aligned_cols=76 Identities=9% Similarity=0.073 Sum_probs=57.5
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc---------------------cHhHHHHcCCcc-
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE---------------------HQSLAQEYGIRG- 102 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~---------------------~~~l~~~~~v~~- 102 (428)
.+++++|.|| +.||+.|....|.+.++.+++++ .+.++.|.++. ...+++.|++..
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~ 129 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKE 129 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCccc
Confidence 4678999998 99999999999999999999876 37777777753 236777888864
Q ss_pred -----------ccEEEEEe-CCCCCccccCCC
Q 014216 103 -----------FPTIKVFV-PGKPPVDYQGAR 122 (428)
Q Consensus 103 -----------~P~~~~~~-~g~~~~~~~g~~ 122 (428)
.|+.+++. +|+....+.+..
T Consensus 130 ~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~ 161 (179)
T 3ixr_A 130 KTMYGRQVIGIERSTFLIGPTHRIVEAWRQVK 161 (179)
T ss_dssp ECCC--CEEEECCEEEEECTTSBEEEEECSCC
T ss_pred ccccCcccCCcceEEEEECCCCEEEEEEcCCC
Confidence 58888884 566555554433
No 403
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.24 E-value=4.5e-06 Score=69.59 Aligned_cols=90 Identities=11% Similarity=0.099 Sum_probs=67.4
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCC-------c----hhHhhh-cCCC------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS-------E----KSLMSK-FNVQ------------ 231 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~-------~----~~~~~~-~~v~------------ 231 (428)
..++++|.||++||+.|....+.+.++++.|+++ +.+..|+++. + ..++++ +++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 4579999999999999999999999999999885 9999987653 2 234455 4432
Q ss_pred --------------cCcE----EEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 232 --------------GFPT----ILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 232 --------------~~P~----i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
.+|+ .+++.+++.....|.|..+.+.+...|.+.+
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 169 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALV 169 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 1465 6777666766667788888877777666554
No 404
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.22 E-value=1.5e-05 Score=63.75 Aligned_cols=111 Identities=17% Similarity=0.237 Sum_probs=80.3
Q ss_pred CCCCcEEeCccchHHHHhhcCCeEEEE-EECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeC--CCchhHhhhcCCCc--
Q 014216 158 DSNESIELNSSNFDELVLKSKDLWIVE-FFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC--DSEKSLMSKFNVQG-- 232 (428)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~~v~-f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~--~~~~~~~~~~~v~~-- 232 (428)
..+-|.+++.++....+ ....+..++ |....-..-..+.+.+.++|+.+++++.|+.+|. .....+++.||++.
T Consensus 12 ~~PLV~e~t~en~~~~~-~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~~~ 90 (147)
T 3bj5_A 12 QLPLVIEFTEQTAPKIF-GGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKKEE 90 (147)
T ss_dssp ---CEEECCTTTHHHHH-SSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCGGG
T ss_pred cCCeeEEeccccHHHHh-cCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCccc
Confidence 56789999999988775 444444444 4432222345678999999999999999999997 44456889999985
Q ss_pred CcEEEEEcC-CCCCccccc-CCCCHHHHHHHHHHHHhhc
Q 014216 233 FPTILVFGA-DKDSPIPYE-GARTAGAIESFALEQLETN 269 (428)
Q Consensus 233 ~P~i~~~~~-~~~~~~~y~-g~~~~~~i~~fi~~~~~~~ 269 (428)
+|+++++.. .....+.+. +.++.+.|.+|+.+.+...
T Consensus 91 ~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~Gk 129 (147)
T 3bj5_A 91 CPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGK 129 (147)
T ss_dssp CSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTC
T ss_pred CCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCC
Confidence 899999864 322234443 7899999999999997644
No 405
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.21 E-value=2.9e-06 Score=71.14 Aligned_cols=88 Identities=14% Similarity=0.054 Sum_probs=63.5
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCC-------c----hhHhhhcCCC-------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS-------E----KSLMSKFNVQ------------- 231 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~-------~----~~~~~~~~v~------------- 231 (428)
..++++|.|+++||+.|....+.+.++.+.+.++ +.+..|+++. + ..+++++++.
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 127 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 127 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSSTT
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCChh
Confidence 3578999999999999999999999999999874 9999998752 1 2233333322
Q ss_pred -----------------------cCcEEEEEcCCCCCcccccCCCCHHHHHHHHHH
Q 014216 232 -----------------------GFPTILVFGADKDSPIPYEGARTAGAIESFALE 264 (428)
Q Consensus 232 -----------------------~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 264 (428)
..|+.+++.+++.....+.|..+.++|.+.|.+
T Consensus 128 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 183 (185)
T 2gs3_A 128 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPH 183 (185)
T ss_dssp BCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHH
T ss_pred hhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHH
Confidence 246777776666656666777777666665544
No 406
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.20 E-value=4.2e-06 Score=70.93 Aligned_cols=90 Identities=9% Similarity=0.106 Sum_probs=71.0
Q ss_pred cCCeEEEEEE-CCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCC----------------------------chhHhh
Q 014216 177 SKDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS----------------------------EKSLMS 226 (428)
Q Consensus 177 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~----------------------------~~~~~~ 226 (428)
..++++|.|| ++||+.|....+.+.++++.|.+ .+.+..|+++. ...+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 3578999999 99999999999999999999976 59999988764 235788
Q ss_pred hcCCC------cCcEEEEEcCCCCCcccccCC----CCHHHHHHHHHHHH
Q 014216 227 KFNVQ------GFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQL 266 (428)
Q Consensus 227 ~~~v~------~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~~ 266 (428)
.|++. .+|+++++.+++.....+.|. .+.+++.+.+....
T Consensus 113 ~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 113 DYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 89988 789999997666554554453 35688888876653
No 407
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.20 E-value=2.7e-06 Score=73.45 Aligned_cols=88 Identities=9% Similarity=0.153 Sum_probs=64.6
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc----------------------------cHhHHH
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 96 (428)
+++++||.|| +.||+.|....|.+.++.+++++ .+.++.|+++. ...+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 5789999999 99999999999999999988863 47777676642 125677
Q ss_pred HcCC-----ccccEEEEEe-CCCCCccccCC----CCcchHHHHHHHH
Q 014216 97 EYGI-----RGFPTIKVFV-PGKPPVDYQGA----RDVKPIAEFALQQ 134 (428)
Q Consensus 97 ~~~v-----~~~P~~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~ 134 (428)
.|++ ..+|+++++. +|+....+.|. .+.+++.+.|.+.
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 7888 3789999985 56554444453 3456677766654
No 408
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.19 E-value=1.1e-06 Score=70.25 Aligned_cols=56 Identities=20% Similarity=0.292 Sum_probs=41.2
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCccc---H----hHHHHcCCccccEEEEEeCCCCC
Q 014216 52 LVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEH---Q----SLAQEYGIRGFPTIKVFVPGKPP 115 (428)
Q Consensus 52 lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~----~l~~~~~v~~~P~~~~~~~g~~~ 115 (428)
++.|+++||++|+++.+.|.++. +.+..+|++.. + .+++.+|+.++|+++ .+|+.+
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if--i~G~~i 113 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--VNGTFI 113 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE--ETTEEE
T ss_pred EEEEECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE--ECCEEE
Confidence 44499999999999999998763 23445566544 3 478899999999974 466543
No 409
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.18 E-value=3.9e-06 Score=70.43 Aligned_cols=88 Identities=10% Similarity=-0.030 Sum_probs=63.8
Q ss_pred CCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc-------------------------cHhHHHHcC
Q 014216 47 ANGVVLVEFYA-PWCGHCQALTPIWEKAATVLKG-VATVAALDANE-------------------------HQSLAQEYG 99 (428)
Q Consensus 47 ~~~~~lv~f~~-~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~-------------------------~~~l~~~~~ 99 (428)
.+++++|.||+ .||+.|....|.+.++.+++++ .+.++.|.++. ...+++.||
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 47899999995 9999999999999999988874 47777776652 124566677
Q ss_pred Cc------cccEEEEEe-CCCCCccccCCC----CcchHHHHHHHH
Q 014216 100 IR------GFPTIKVFV-PGKPPVDYQGAR----DVKPIAEFALQQ 134 (428)
Q Consensus 100 v~------~~P~~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~ 134 (428)
+. ..|+.+++. +|+....+.|.. +.+.+.+.|.+.
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l 154 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAA 154 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 76 369999885 566555555543 456676666654
No 410
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.18 E-value=5.8e-06 Score=68.25 Aligned_cols=88 Identities=10% Similarity=-0.002 Sum_probs=62.9
Q ss_pred CCCeEEEEEECCCCh-hhhhhhHHHHHHHHHhc---CceEEEEEcCc-------------------------------cc
Q 014216 47 ANGVVLVEFYAPWCG-HCQALTPIWEKAATVLK---GVATVAALDAN-------------------------------EH 91 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~-~C~~~~~~~~~~~~~~~---~~v~~~~vd~~-------------------------------~~ 91 (428)
.+++++|.||++||+ .|....+.+.++.+.+. ..+.++.|.++ ..
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 488999999999997 69999999999999985 34666666654 11
Q ss_pred HhHHHHcCC---------ccccEEEEEe-CCCCCccccCC-CCcchHHHHHHHH
Q 014216 92 QSLAQEYGI---------RGFPTIKVFV-PGKPPVDYQGA-RDVKPIAEFALQQ 134 (428)
Q Consensus 92 ~~l~~~~~v---------~~~P~~~~~~-~g~~~~~~~g~-~~~~~l~~~i~~~ 134 (428)
.++++.||+ ...|+++++. +|+....|.|. .+.+++.+.|.+.
T Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~ 160 (170)
T 3me7_A 107 FKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLA 160 (170)
T ss_dssp HHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHH
T ss_pred HHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHh
Confidence 245666553 3557788884 56555556775 5567777777665
No 411
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.18 E-value=6.4e-06 Score=68.81 Aligned_cols=86 Identities=21% Similarity=0.358 Sum_probs=64.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCc--c----------------------------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN--E---------------------------------- 90 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~--~---------------------------------- 90 (428)
..++.||.|+.-.|++|+++++.+.++.+.+.+.+.+..+... .
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~~~~ 99 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVPVMFNRIHTL 99 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEECSSSSGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEecCCCCCchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999998876555433321 0
Q ss_pred ---------------------------------------cHhHHHHcCCccccEEEEEeCCCCCccccCCCCcchHHHHH
Q 014216 91 ---------------------------------------HQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFA 131 (428)
Q Consensus 91 ---------------------------------------~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i 131 (428)
+..+++++||+++|++++ +|+.+....|..+.+.+.+.|
T Consensus 100 ~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gTPtfiI--NGky~v~~~~~~s~e~~~~~i 177 (184)
T 4dvc_A 100 RKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDSGLTGVPAVVV--NNRYLVQGQSAKSLDEYFDLV 177 (184)
T ss_dssp CCCCSSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHHHH
T ss_pred hhccchHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEEeeCCcCCCCHHHHHHHH
Confidence 116678899999999765 787555556667777777666
Q ss_pred HHH
Q 014216 132 LQQ 134 (428)
Q Consensus 132 ~~~ 134 (428)
..+
T Consensus 178 ~~L 180 (184)
T 4dvc_A 178 NYL 180 (184)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 412
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.17 E-value=4e-06 Score=67.04 Aligned_cols=79 Identities=24% Similarity=0.403 Sum_probs=59.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcC--------------------------------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA-------------------------------------- 88 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~-------------------------------------- 88 (428)
..+..|+.|+.++|++|+++.+.+.++ +++.+...+.
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~ 87 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM-----TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVG 87 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC-----CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc-----CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCc
Confidence 467899999999999999999988654 3333322111
Q ss_pred --------cccHhHHHHcCCccccEEEEEeCCCCCccccCCCCcchHHHHHHHH
Q 014216 89 --------NEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (428)
Q Consensus 89 --------~~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i~~~ 134 (428)
+++.++++++||+++|++++ .+|+ .+.|..+.+.|.++|.+.
T Consensus 88 ~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~---~i~G~~~~~~l~~~i~~~ 137 (147)
T 3gv1_A 88 GSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR---TQSGYSPMPQLEEIIRKN 137 (147)
T ss_dssp CCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC---EEESCCCTTHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE---EeeCCCCHHHHHHHHHHH
Confidence 12457889999999999876 5664 477999999999988765
No 413
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.17 E-value=3.9e-06 Score=71.46 Aligned_cols=89 Identities=9% Similarity=0.163 Sum_probs=70.8
Q ss_pred CCeEEEEEE-CCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCC----------------------------chhHhhh
Q 014216 178 KDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS----------------------------EKSLMSK 227 (428)
Q Consensus 178 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~----------------------------~~~~~~~ 227 (428)
.++++|.|| ++||+.|....+.+.++++.|.+ .+.+..|+.+. ...+++.
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 115 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 115 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHH
Confidence 578999999 99999999999999999999976 58999888764 3467888
Q ss_pred cCCC------cCcEEEEEcCCCCCcccccCC----CCHHHHHHHHHHHH
Q 014216 228 FNVQ------GFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQL 266 (428)
Q Consensus 228 ~~v~------~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~~ 266 (428)
|++. .+|+++++.+++.....+.|. .+.+++.+.+....
T Consensus 116 ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 116 YGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 9998 899999997666544444443 35688888776654
No 414
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.15 E-value=8.3e-06 Score=67.59 Aligned_cols=83 Identities=19% Similarity=0.287 Sum_probs=64.4
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC-------------------------------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD------------------------------------- 219 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~------------------------------------- 219 (428)
..+++++.|+..|||+|+.+.+.+.++.+.+.+ +.+...+..
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~ 99 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKAN 99 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCC
Confidence 356889999999999999999999999998765 555544421
Q ss_pred --------------------------------CchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 220 --------------------------------SEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 220 --------------------------------~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
.+..+++++||.++|++++ ++ ..+.|..+.+.+...|.+.+
T Consensus 100 ~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i---~g---~~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 100 ETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV---ED---ALVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE---TT---EEECSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE---CC---EEeeCCCCHHHHHHHHHHHH
Confidence 1234677899999999987 23 25578889999999987765
No 415
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.15 E-value=4.7e-06 Score=71.39 Aligned_cols=88 Identities=10% Similarity=0.139 Sum_probs=64.4
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc----------------------------cHhHHH
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 96 (428)
.++++||.|| +.||++|....|.+.++.++++. .+.++.|+++. ...+++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 4789999999 99999999999999999998864 47777776642 125677
Q ss_pred HcCCc------cccEEEEEe-CCCCCccccCCC----CcchHHHHHHHH
Q 014216 97 EYGIR------GFPTIKVFV-PGKPPVDYQGAR----DVKPIAEFALQQ 134 (428)
Q Consensus 97 ~~~v~------~~P~~~~~~-~g~~~~~~~g~~----~~~~l~~~i~~~ 134 (428)
.||+. .+|+.+++. +|+....+.|.. +.+++.+.|...
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 78884 699999985 565544444433 445666666554
No 416
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.15 E-value=8.7e-06 Score=68.81 Aligned_cols=91 Identities=21% Similarity=0.315 Sum_probs=67.4
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCc-------------------------------------
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN------------------------------------- 89 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~------------------------------------- 89 (428)
..++.|+.|+..||++|+.+.+.+.++.+.+++++.+..+...
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~s~~aa~a~~aa~~~~~~~~~~~~lf~~~~~~~~ 100 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKI 100 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEECCCSGGGHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEeccccCcccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHhCC
Confidence 3678999999999999999999999999988777666544431
Q ss_pred -------------------------------------ccHhHHHHcCCccccEEEEEeCCCCCccccCCCCcchHHHHHH
Q 014216 90 -------------------------------------EHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFAL 132 (428)
Q Consensus 90 -------------------------------------~~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~i~ 132 (428)
.+..+++++||.++|++++ +|+. ...|..+.+.+...|.
T Consensus 101 ~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~vi--ng~~--~~~g~~~~~~l~~~i~ 176 (195)
T 2znm_A 101 RLENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLTEQYRIDSTPTVIV--GGKY--RVIFNNGFDGGVHTIK 176 (195)
T ss_dssp CTTSHHHHHHHHHTCSSSCHHHHHHHHTSHHHHHHHHHHHHHHHHTTCCSSSEEEE--TTTE--EECCCSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCCCeEEE--CCEE--EEcCCCCHHHHHHHHH
Confidence 0124567789999999544 6653 2457677888888888
Q ss_pred HHHHHHHHH
Q 014216 133 QQIKALLKE 141 (428)
Q Consensus 133 ~~l~~~~~~ 141 (428)
+.+......
T Consensus 177 ~~l~~~~~~ 185 (195)
T 2znm_A 177 ELVAKVREE 185 (195)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777654433
No 417
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=98.13 E-value=6e-06 Score=60.02 Aligned_cols=74 Identities=20% Similarity=0.391 Sum_probs=53.2
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHc-----CCccccEEEEEeCCCCCccccCCCCc
Q 014216 50 VVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEY-----GIRGFPTIKVFVPGKPPVDYQGARDV 124 (428)
Q Consensus 50 ~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~-----~v~~~P~~~~~~~g~~~~~~~g~~~~ 124 (428)
..|+.|+++||++|+++...|.+ ..+.|-.+|++++++..+.+ |.+++|+++ +.+|..+. ..+.
T Consensus 4 a~I~vYs~~~Cp~C~~aK~~L~~------~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~-i~Dg~~l~----~~~~ 72 (92)
T 2lqo_A 4 AALTIYTTSWCGYCLRLKTALTA------NRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVK-FADGSTLT----NPSA 72 (92)
T ss_dssp SCEEEEECTTCSSHHHHHHHHHH------TTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEE-ETTSCEEE----SCCH
T ss_pred CcEEEEcCCCCHhHHHHHHHHHh------cCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEE-EeCCEEEe----CCCH
Confidence 35788999999999999988765 23677788888777554432 788999964 45665322 2466
Q ss_pred chHHHHHHHH
Q 014216 125 KPIAEFALQQ 134 (428)
Q Consensus 125 ~~l~~~i~~~ 134 (428)
+++.+++.+.
T Consensus 73 ~el~~~L~el 82 (92)
T 2lqo_A 73 DEVKAKLVKI 82 (92)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7788888765
No 418
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.12 E-value=7.3e-06 Score=69.60 Aligned_cols=92 Identities=14% Similarity=0.134 Sum_probs=68.6
Q ss_pred cCCeEEEEEECCCChh-HhhHHHHHHHHHHHhc----CCeEEEEEeCCC----------------------------chh
Q 014216 177 SKDLWIVEFFAPWCGH-CKKLAPEWKKAANNLK----GKVKLGHVDCDS----------------------------EKS 223 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~-c~~~~~~~~~~a~~~~----~~~~f~~v~~~~----------------------------~~~ 223 (428)
..++++|.|+++||++ |....+.+.++.+.+. +.+.+..|+.+. ...
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 3578999999999997 9999999999777664 468888888763 124
Q ss_pred HhhhcCCC-cCc---------------EEEEEcCCCCCcccccCCCCHHHHHHHHHHHHhh
Q 014216 224 LMSKFNVQ-GFP---------------TILVFGADKDSPIPYEGARTAGAIESFALEQLET 268 (428)
Q Consensus 224 ~~~~~~v~-~~P---------------~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (428)
+++.||+. ..| +++++.+++.....+.|..+.+.+.+.|.+.+..
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~~ 180 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVKS 180 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHHH
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 67788876 333 6788877776666778888888888888777643
No 419
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.12 E-value=8.2e-06 Score=70.01 Aligned_cols=90 Identities=17% Similarity=0.180 Sum_probs=69.8
Q ss_pred cCCeEEEEEE-CCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCC----------------------------chhHhh
Q 014216 177 SKDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS----------------------------EKSLMS 226 (428)
Q Consensus 177 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~----------------------------~~~~~~ 226 (428)
..++++|.|| ++||+.|....+.+.+++++|.+ .+.+..|+.+. +..+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 3568999999 99999999999999999999964 58888887654 345788
Q ss_pred hcCCC-----cCcEEEEEcCCCCCcccccCC----CCHHHHHHHHHHHH
Q 014216 227 KFNVQ-----GFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQL 266 (428)
Q Consensus 227 ~~~v~-----~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~~ 266 (428)
.|++. .+|+++++.+++.....+.|. .+.+++.+.+....
T Consensus 131 ~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~ 179 (213)
T 2i81_A 131 DYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQ 179 (213)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 89998 889999997766544444443 34788888776553
No 420
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.11 E-value=4.6e-06 Score=68.92 Aligned_cols=85 Identities=9% Similarity=0.071 Sum_probs=58.3
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcc-----------------------cHhHHHHcCCcc
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKGVATVAALDANE-----------------------HQSLAQEYGIRG 102 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~l~~~~~v~~ 102 (428)
.+++++|.|| +.||+.|....+.+.++.+++ ..+.++.|.++. ...+ +.|++..
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~ 123 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDM-EKYGVLI 123 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGG-GGGTCBB
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcH-HHhCCEe
Confidence 4779999999 899999999999999999888 567777776642 1234 5566542
Q ss_pred ---------ccEEEEEe-CCCCCccccC-----CCCcchHHHHHHH
Q 014216 103 ---------FPTIKVFV-PGKPPVDYQG-----ARDVKPIAEFALQ 133 (428)
Q Consensus 103 ---------~P~~~~~~-~g~~~~~~~g-----~~~~~~l~~~i~~ 133 (428)
.|+++++. +|+....+.| ..+.+.+.+.|.+
T Consensus 124 ~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~ 169 (171)
T 2yzh_A 124 GEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKE 169 (171)
T ss_dssp CSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHH
T ss_pred cccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHh
Confidence 58888885 5554445543 2334556555543
No 421
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.11 E-value=6.1e-06 Score=69.60 Aligned_cols=90 Identities=17% Similarity=0.194 Sum_probs=69.9
Q ss_pred cCCeEEEEEE-CCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCC----------------------------chhHhh
Q 014216 177 SKDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS----------------------------EKSLMS 226 (428)
Q Consensus 177 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~----------------------------~~~~~~ 226 (428)
..++++|.|| ++||+.|....+.+.++++.|.+ .+.+..|+.+. +..+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 3578999999 99999999999999999999964 58888887753 235788
Q ss_pred hcCCC-----cCcEEEEEcCCCCCcccccCC----CCHHHHHHHHHHHH
Q 014216 227 KFNVQ-----GFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQL 266 (428)
Q Consensus 227 ~~~v~-----~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~~ 266 (428)
.|++. .+|+++++.+++.....+.|. .+.+++.+.+....
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 89998 899999997666544444453 34677777776543
No 422
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.10 E-value=1.4e-05 Score=65.55 Aligned_cols=88 Identities=15% Similarity=0.157 Sum_probs=67.0
Q ss_pred cCCeEEEEEECCC-ChhHhhHHHHHHHHHHHhcCCeEEEEEeCCC-----------------------chhHhhhcCCCc
Q 014216 177 SKDLWIVEFFAPW-CGHCKKLAPEWKKAANNLKGKVKLGHVDCDS-----------------------EKSLMSKFNVQG 232 (428)
Q Consensus 177 ~~~~~~v~f~~~~-c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~-----------------------~~~~~~~~~v~~ 232 (428)
..++++|.||+.| |+.|....+.+.++++.+ ..+.+..|+.+. ...+++.|++..
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~ 121 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYI 121 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBB
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCcc
Confidence 3568999999999 999999999999999999 778888888763 235677788775
Q ss_pred ------CcEEEEEcCCCCCcccccCC-----CCHHHHHHHHHHH
Q 014216 233 ------FPTILVFGADKDSPIPYEGA-----RTAGAIESFALEQ 265 (428)
Q Consensus 233 ------~P~i~~~~~~~~~~~~y~g~-----~~~~~i~~fi~~~ 265 (428)
.|+.+++.+++.....+.|. .+.+++.+.+.+.
T Consensus 122 ~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 122 KELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp TTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred ccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 49999997777655555442 2447777776554
No 423
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.10 E-value=8e-06 Score=70.27 Aligned_cols=82 Identities=17% Similarity=0.262 Sum_probs=60.5
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeC--------------------------------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC-------------------------------------- 218 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~-------------------------------------- 218 (428)
..+++++.|+.+||++|+.+.+.+.++++. .+.+..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 356889999999999999999999988763 344443321
Q ss_pred ------CCchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHHH
Q 014216 219 ------DSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (428)
Q Consensus 219 ------~~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (428)
+.+..+++++||+++|+++ +.++ ..+.|..+.+.|..++.+..
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gtPt~v-~~dG----~~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 162 SCDVDIADHYALGVQLGVSGTPAVV-LSNG----TLVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCSCCHHHHHHHHHHHTCCSSSEEE-CTTS----CEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccCEEE-EcCC----eEecCCCCHHHHHHHHHHhh
Confidence 1134678899999999995 4322 24578888999999887664
No 424
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.10 E-value=3.8e-06 Score=73.52 Aligned_cols=88 Identities=13% Similarity=0.088 Sum_probs=65.5
Q ss_pred CCCe-EEEEEECCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc---------------------------cHhHHHH
Q 014216 47 ANGV-VLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE---------------------------HQSLAQE 97 (428)
Q Consensus 47 ~~~~-~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~---------------------------~~~l~~~ 97 (428)
.++. +|+.||++||+.|....+.+.+++.++++ .+.++.|++|. +..+++.
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ 111 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARR 111 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHH
Confidence 4554 56678999999999999999999999875 47888888753 2468889
Q ss_pred cCCc-------cccEEEEEe-CCCCCccccCC----CCcchHHHHHHHH
Q 014216 98 YGIR-------GFPTIKVFV-PGKPPVDYQGA----RDVKPIAEFALQQ 134 (428)
Q Consensus 98 ~~v~-------~~P~~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~ 134 (428)
||+. ++|+++++. +|+....+.|. ++.+++.+.|...
T Consensus 112 ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 112 LGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp HTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred hCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHH
Confidence 9997 899998885 55544444443 3566777776654
No 425
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=98.09 E-value=3.4e-06 Score=61.27 Aligned_cols=56 Identities=21% Similarity=0.392 Sum_probs=44.6
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCc--ccHhHHHHc-CCccccEEEEEeCCCC
Q 014216 51 VLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN--EHQSLAQEY-GIRGFPTIKVFVPGKP 114 (428)
Q Consensus 51 ~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~-~v~~~P~~~~~~~g~~ 114 (428)
.++.|+++||++|+++.+.+.+.. +.+..+|++ ...++.+.+ ++.++|+++ .+|+.
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~------i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~ 65 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG------VKYTDIDASTSLRQEMVQRANGRNTFPQIF--IGDYH 65 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT------CCEEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEE
T ss_pred eEEEEECCCChhHHHHHHHHHHcC------CCcEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEE
Confidence 377899999999999999887642 457778887 566788889 999999974 36653
No 426
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.09 E-value=7.4e-06 Score=70.70 Aligned_cols=89 Identities=10% Similarity=0.149 Sum_probs=70.4
Q ss_pred CCeEEEEEE-CCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCC----------------------------chhHhhh
Q 014216 178 KDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS----------------------------EKSLMSK 227 (428)
Q Consensus 178 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~----------------------------~~~~~~~ 227 (428)
.++++|.|| +.||+.|....+.+.++++.|.+ .+.+..|+++. +..+++.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 478999999 99999999999999999999965 58888887753 2467889
Q ss_pred cCCC------cCcEEEEEcCCCCCcccccCC----CCHHHHHHHHHHHH
Q 014216 228 FNVQ------GFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQL 266 (428)
Q Consensus 228 ~~v~------~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~~ 266 (428)
|++. .+|+++++.+++.....+.|. .+.+++.+.+....
T Consensus 136 ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 136 YGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred hCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 9998 899999997666544444444 45688888776654
No 427
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=98.08 E-value=5.2e-06 Score=60.68 Aligned_cols=69 Identities=13% Similarity=0.241 Sum_probs=49.3
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCc-----cc----HhHHHHcCCccccEEEEEeCCCCCccccCCC
Q 014216 52 LVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN-----EH----QSLAQEYGIRGFPTIKVFVPGKPPVDYQGAR 122 (428)
Q Consensus 52 lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~-----~~----~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~ 122 (428)
++.|+++||++|+++.+.+.+.. +.+-.+|++ +. .++.+.+++.++|++++ +|+. ..| .
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~---i~G-~ 81 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDKH---VLG-Y 81 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEE---EES-C
T ss_pred EEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCEE---EeC-C
Confidence 67799999999999998887753 223344554 33 67778899999999876 5542 233 4
Q ss_pred CcchHHHHHH
Q 014216 123 DVKPIAEFAL 132 (428)
Q Consensus 123 ~~~~l~~~i~ 132 (428)
+.+.+.+++.
T Consensus 82 ~~~~l~~~l~ 91 (92)
T 3ic4_A 82 NEEKLKELIR 91 (92)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHhc
Confidence 7788877764
No 428
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.07 E-value=8.3e-06 Score=66.76 Aligned_cols=73 Identities=11% Similarity=0.071 Sum_probs=54.0
Q ss_pred CCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhcCceEEEEEcCcc-----------------------cHhHHHHcCCc-
Q 014216 47 ANGVVLVEFYA-PWCGHCQALTPIWEKAATVLKGVATVAALDANE-----------------------HQSLAQEYGIR- 101 (428)
Q Consensus 47 ~~~~~lv~f~~-~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~l~~~~~v~- 101 (428)
++++++|.||+ .||++|....|.+.++.+++ ..+.++.|+.+. ...+++.||+.
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 119 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYALLI 119 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTCBC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhCCcc
Confidence 47899999994 99999999999999999888 557777666642 23466667776
Q ss_pred ---c--ccEEEEEe-CCCCCccccC
Q 014216 102 ---G--FPTIKVFV-PGKPPVDYQG 120 (428)
Q Consensus 102 ---~--~P~~~~~~-~g~~~~~~~g 120 (428)
+ .|+.+++. +|+....+.|
T Consensus 120 ~~~g~~~p~~~liD~~G~i~~~~~g 144 (163)
T 1psq_A 120 NEWHLLARAVFVLDTDNTIRYVEYV 144 (163)
T ss_dssp TTTCSBCCEEEEECTTCBEEEEEEC
T ss_pred ccCCceEEEEEEEcCCCeEEEEEec
Confidence 3 38888884 5655555554
No 429
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.05 E-value=7e-06 Score=69.01 Aligned_cols=41 Identities=20% Similarity=0.414 Sum_probs=33.9
Q ss_pred CCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCceEEEEEcC
Q 014216 48 NGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDA 88 (428)
Q Consensus 48 ~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~v~~~~vd~ 88 (428)
.++.+|.|++.||++|+++.|.+ .++.+.+.+++.|..++.
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 57 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHV 57 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEEC
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEec
Confidence 46899999999999999999986 688888777666665554
No 430
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.05 E-value=1.6e-05 Score=68.02 Aligned_cols=80 Identities=16% Similarity=0.226 Sum_probs=59.1
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC-------------------------------------
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD------------------------------------- 219 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~------------------------------------- 219 (428)
..+++++.|+.+||++|+.+.+.++++.+. .+.+..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~---~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL---GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 356889999999999999999999987653 2444432211
Q ss_pred -------CchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHH
Q 014216 220 -------SEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALE 264 (428)
Q Consensus 220 -------~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 264 (428)
.+..+++++||+++|++++ . ++. .+.|..+.+.|..++..
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gTPt~vi-~-nG~---~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRGTPSIVT-S-TGE---LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCSSCEEEC-T-TSC---CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcCCEEEE-e-CCE---EecCCCCHHHHHHHHHh
Confidence 1245778999999999988 3 332 45788899999988754
No 431
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.03 E-value=2.2e-06 Score=69.77 Aligned_cols=68 Identities=18% Similarity=0.337 Sum_probs=45.0
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc---------------------cHhHHHHcCCc--
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE---------------------HQSLAQEYGIR-- 101 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~---------------------~~~l~~~~~v~-- 101 (428)
++++++|.|| +.||++|....|.+.++..++++ .+.++.|+.+. +.+++++||+.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~ 108 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWE 108 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCccc
Confidence 5788999999 99999999999999888888775 46676676652 23567777764
Q ss_pred ---------cccEEEEEe-CCCC
Q 014216 102 ---------GFPTIKVFV-PGKP 114 (428)
Q Consensus 102 ---------~~P~~~~~~-~g~~ 114 (428)
..|+++++. +|+.
T Consensus 109 ~~~~~~~~~~~p~tflID~~G~I 131 (157)
T 4g2e_A 109 FPALPGYVLAKRAVFVIDKEGKV 131 (157)
T ss_dssp CTTSTTCEEECEEEEEECTTSBE
T ss_pred cccCCCcceeeeeEEEECCCCEE
Confidence 467777774 4544
No 432
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.02 E-value=1.5e-05 Score=69.67 Aligned_cols=86 Identities=10% Similarity=0.171 Sum_probs=62.9
Q ss_pred CCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc----------------------------cHhHHH
Q 014216 47 ANGVVLVEFYA-PWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (428)
Q Consensus 47 ~~~~~lv~f~~-~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 96 (428)
.+++++|.||+ .||+.|....|.+.++.+++++ .+.++.|.++. ...+++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 47899999998 9999999999999999999975 47777777652 125777
Q ss_pred HcCCc------cccEEEEEe-CCCCCccccCCC----CcchHHHHHH
Q 014216 97 EYGIR------GFPTIKVFV-PGKPPVDYQGAR----DVKPIAEFAL 132 (428)
Q Consensus 97 ~~~v~------~~P~~~~~~-~g~~~~~~~g~~----~~~~l~~~i~ 132 (428)
.||+. .+|+++++. +|+....+.+.. +.+++.+.|.
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~ 202 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQ 202 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 88887 689998885 555444444432 3445555554
No 433
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.02 E-value=3.9e-05 Score=64.58 Aligned_cols=40 Identities=13% Similarity=0.223 Sum_probs=34.2
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEc
Q 014216 48 NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALD 87 (428)
Q Consensus 48 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd 87 (428)
.++.|+.|+..+|++|+.+.+.+.++.+.+.+++.+..+.
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p 64 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVP 64 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEE
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeC
Confidence 4678999999999999999999999999888777665444
No 434
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.02 E-value=2.6e-05 Score=64.52 Aligned_cols=38 Identities=18% Similarity=0.209 Sum_probs=32.3
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHh--cCceEEEE
Q 014216 48 NGVVLVEFYAPWCGHCQALTPIWEKAATVL--KGVATVAA 85 (428)
Q Consensus 48 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~--~~~v~~~~ 85 (428)
.+..|+.|+..+|++|+.+.+.+.++.+.+ .+++.+..
T Consensus 27 a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~ 66 (175)
T 1z6m_A 27 APVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERII 66 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEE
Confidence 567899999999999999999999988888 66665554
No 435
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.01 E-value=1.9e-05 Score=55.05 Aligned_cols=68 Identities=16% Similarity=0.245 Sum_probs=51.2
Q ss_pred EEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhh---hcCCCcCcEEEEEcCCCCCcccccCCCCHHHH
Q 014216 182 IVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMS---KFNVQGFPTILVFGADKDSPIPYEGARTAGAI 258 (428)
Q Consensus 182 ~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~---~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i 258 (428)
++.|+++||++|+...+.+++. .+.|..+|.+.++.+.+ ++++.++|+++. ++. . .+..+.+.|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~---~g~-~---~~g~~~~~l 69 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV---DGE-H---WSGFRPERI 69 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE---TTE-E---EESCCHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE---CCe-E---EcCCCHHHH
Confidence 6789999999999999988864 36777788887765555 899999999874 332 1 344677777
Q ss_pred HHHH
Q 014216 259 ESFA 262 (428)
Q Consensus 259 ~~fi 262 (428)
.+++
T Consensus 70 ~~~l 73 (75)
T 1r7h_A 70 KQLQ 73 (75)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 436
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=98.00 E-value=1e-05 Score=67.74 Aligned_cols=30 Identities=20% Similarity=0.407 Sum_probs=28.2
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHh
Q 014216 48 NGVVLVEFYAPWCGHCQALTPIWEKAATVL 77 (428)
Q Consensus 48 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~ 77 (428)
+++.||.|++.||++|+++.|.+.++.+.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 678999999999999999999999999887
No 437
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=98.00 E-value=3.6e-06 Score=64.74 Aligned_cols=58 Identities=26% Similarity=0.470 Sum_probs=43.7
Q ss_pred EEEEECCCChhhhhh-hHHHHHHHHHhcCceEEEEEcCcccH-------hHHHHcCCccccEEEEEeCCCC
Q 014216 52 LVEFYAPWCGHCQAL-TPIWEKAATVLKGVATVAALDANEHQ-------SLAQEYGIRGFPTIKVFVPGKP 114 (428)
Q Consensus 52 lv~f~~~~C~~C~~~-~~~~~~~~~~~~~~v~~~~vd~~~~~-------~l~~~~~v~~~P~~~~~~~g~~ 114 (428)
++.|+++||++|+++ .+.+.+... ..+.+..+|++.++ .+.+.+|+.++|++ |.+|+.
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi~g~~ 92 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YINGKH 92 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEE
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 666999999999999 877765431 23567777877653 58888999999996 457754
No 438
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.99 E-value=1.2e-05 Score=59.56 Aligned_cols=60 Identities=13% Similarity=0.272 Sum_probs=45.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHhHHHHc-----CCccccEEEEEeCCCC
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEY-----GIRGFPTIKVFVPGKP 114 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~-----~v~~~P~~~~~~~g~~ 114 (428)
++..-++.|+++||++|+++.+.|.+.. +.+..+|++.+++..+.+ |..++|++ |.+|+.
T Consensus 13 ~~~~~v~vy~~~~Cp~C~~ak~~L~~~~------i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~ 77 (99)
T 3qmx_A 13 AVSAKIEIYTWSTCPFCMRALALLKRKG------VEFQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQH 77 (99)
T ss_dssp CCCCCEEEEECTTCHHHHHHHHHHHHHT------CCCEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEE
T ss_pred cCCCCEEEEEcCCChhHHHHHHHHHHCC------CCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEE
Confidence 4566788899999999999999987652 456677887776554443 89999987 446653
No 439
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.98 E-value=1.8e-05 Score=64.88 Aligned_cols=72 Identities=14% Similarity=0.170 Sum_probs=53.9
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcc-----------------------cHhHHHHcCCcc
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKGVATVAALDANE-----------------------HQSLAQEYGIRG 102 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~l~~~~~v~~ 102 (428)
.+++++|.|| +.||++|....|.+.++.+++ ..+.++.|+.+. ...+++.||+..
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 120 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQLGVDI 120 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHHHHTTCEE
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHHHHhCcee
Confidence 4789999999 899999999999999999988 556776666542 245677777753
Q ss_pred ---------ccEEEEEe-CCCCCcccc
Q 014216 103 ---------FPTIKVFV-PGKPPVDYQ 119 (428)
Q Consensus 103 ---------~P~~~~~~-~g~~~~~~~ 119 (428)
.|+.+++. +|+....+.
T Consensus 121 ~~~~~~g~~~p~~~liD~~G~i~~~~~ 147 (165)
T 1q98_A 121 QTGPLAGLTSRAVIVLDEQNNVLHSQL 147 (165)
T ss_dssp CSSTTTTSBCCEEEEECTTSBEEEEEE
T ss_pred cccccCCccceeEEEEcCCCEEEEEEe
Confidence 48888884 565555554
No 440
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.98 E-value=1.1e-05 Score=66.07 Aligned_cols=74 Identities=15% Similarity=0.123 Sum_probs=52.5
Q ss_pred CCCeEEEEEE-CCCChhhh-hhhHHHHHHHHHhcC-ceE-EEEEcCcc-----------------------cHhHHHHcC
Q 014216 47 ANGVVLVEFY-APWCGHCQ-ALTPIWEKAATVLKG-VAT-VAALDANE-----------------------HQSLAQEYG 99 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~-~~~~~~~~~~~~~~~-~v~-~~~vd~~~-----------------------~~~l~~~~~ 99 (428)
++++++|.|| +.||+.|. ...|.+.++.+++++ .+. ++.|+.+. +..+++.||
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 113 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYPENKHVKFLADGSATYTHALG 113 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCTTCSSEEEEECTTSHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcCCCCCeEEEECCCchHHHHcC
Confidence 5789999999 89999999 899999999988763 455 66665542 235666777
Q ss_pred Cc-----------cccEEEEEeCCCCCccccC
Q 014216 100 IR-----------GFPTIKVFVPGKPPVDYQG 120 (428)
Q Consensus 100 v~-----------~~P~~~~~~~g~~~~~~~g 120 (428)
+. ..|+.+++.+|+....+.|
T Consensus 114 v~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~ 145 (162)
T 1tp9_A 114 LELDLQEKGLGTRSRRFALLVDDLKVKAANIE 145 (162)
T ss_dssp CEEEETTTTSEEEECCEEEEEETTEEEEEEEC
T ss_pred cccccccCCCCccceeEEEEEECCEEEEEEee
Confidence 65 2688777775554333333
No 441
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.97 E-value=2.7e-05 Score=64.90 Aligned_cols=86 Identities=12% Similarity=0.124 Sum_probs=56.7
Q ss_pred CCCe-EEEEEECCCChhhhh-hhHHHHHHHHHhcC-ceE-EEEEcCcc-----------------------cHhHHHHcC
Q 014216 47 ANGV-VLVEFYAPWCGHCQA-LTPIWEKAATVLKG-VAT-VAALDANE-----------------------HQSLAQEYG 99 (428)
Q Consensus 47 ~~~~-~lv~f~~~~C~~C~~-~~~~~~~~~~~~~~-~v~-~~~vd~~~-----------------------~~~l~~~~~ 99 (428)
++++ +|+.||+.||+.|.. ..|.+.++++++++ .+. ++.|+.+. +.++++.||
T Consensus 55 ~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yG 134 (184)
T 3uma_A 55 KGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSGGMGKIHFLSDWNAAFTKAIG 134 (184)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHTCTTTSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhCCCCceEEEEcCchHHHHHcC
Confidence 4565 555566999999999 79999999998875 366 77777653 125677777
Q ss_pred Cc-----------cccEEEEEeCCCCCcccc----CCCCcchHHHHHH
Q 014216 100 IR-----------GFPTIKVFVPGKPPVDYQ----GARDVKPIAEFAL 132 (428)
Q Consensus 100 v~-----------~~P~~~~~~~g~~~~~~~----g~~~~~~l~~~i~ 132 (428)
+. ..|+.+++.+|+....+. |..+.+.+...+.
T Consensus 135 v~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~~~g~~~~~~~~~vL~ 182 (184)
T 3uma_A 135 MEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEESPGQATASGAAAMLE 182 (184)
T ss_dssp CEEEEGGGTCEEEECCEEEEEETTEEEEEEECSSTTCCSTTSHHHHHH
T ss_pred CceeccccCCcccceeEEEEECCCEEEEEEEeCCCCCCcCCCHHHHHh
Confidence 75 246677777776544443 3444455554443
No 442
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.96 E-value=1.6e-05 Score=59.69 Aligned_cols=55 Identities=18% Similarity=0.335 Sum_probs=41.9
Q ss_pred EEEEEC-----CCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHh----HHHHcCCccccEEEEEeCCCC
Q 014216 52 LVEFYA-----PWCGHCQALTPIWEKAATVLKGVATVAALDANEHQS----LAQEYGIRGFPTIKVFVPGKP 114 (428)
Q Consensus 52 lv~f~~-----~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~----l~~~~~v~~~P~~~~~~~g~~ 114 (428)
++.|++ +||++|+++.+.+.+.. +.|..+|+++++. +.+.+|..++|+++ .+|+.
T Consensus 19 vvvf~~g~~~~~~C~~C~~~~~~L~~~~------i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v~--i~g~~ 82 (105)
T 2yan_A 19 VMLFMKGNKQEAKCGFSKQILEILNSTG------VEYETFDILEDEEVRQGLKAYSNWPTYPQLY--VKGEL 82 (105)
T ss_dssp EEEEESBCSSSBCTTHHHHHHHHHHHHT------CCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE--ETTEE
T ss_pred EEEEEecCCCCCCCccHHHHHHHHHHCC------CCeEEEECCCCHHHHHHHHHHHCCCCCCeEE--ECCEE
Confidence 444777 99999999999987752 5677888887765 45567999999974 46654
No 443
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=97.96 E-value=1.2e-05 Score=66.04 Aligned_cols=69 Identities=19% Similarity=0.196 Sum_probs=51.2
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcc-----------------------cHhHHHHcCCcc
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKGVATVAALDANE-----------------------HQSLAQEYGIRG 102 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~l~~~~~v~~ 102 (428)
.+++++|.|| +.||++|....|.+.++.++ ..+.++.|+.+. +..+++.||+..
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~ 122 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVM 122 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEE
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCcc
Confidence 4788999999 78999999999999998877 346666666542 235667777775
Q ss_pred ------ccEEEEEe-CCCCCcc
Q 014216 103 ------FPTIKVFV-PGKPPVD 117 (428)
Q Consensus 103 ------~P~~~~~~-~g~~~~~ 117 (428)
.|+.+++. +|+....
T Consensus 123 ~~~g~~~p~~~liD~~G~i~~~ 144 (166)
T 3p7x_A 123 EELRLLARAVFVLDADNKVVYK 144 (166)
T ss_dssp TTTTEECCEEEEECTTCBEEEE
T ss_pred ccCCceeeEEEEECCCCeEEEE
Confidence 89998884 5654443
No 444
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.96 E-value=1.5e-05 Score=65.78 Aligned_cols=90 Identities=17% Similarity=0.308 Sum_probs=66.4
Q ss_pred cCCeEEEEEECCCCh-hHhhHHHHHHHHHHHhcCC---eEEEEEeCCC---ch----hHhhh------------------
Q 014216 177 SKDLWIVEFFAPWCG-HCKKLAPEWKKAANNLKGK---VKLGHVDCDS---EK----SLMSK------------------ 227 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~-~c~~~~~~~~~~a~~~~~~---~~f~~v~~~~---~~----~~~~~------------------ 227 (428)
..++++|.||++||+ .|....+.+.++.+.+.+. +.+..|+++. +. .++++
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 357899999999999 9999999999999988653 8999998762 11 11222
Q ss_pred -------------------cCCCcCcEEEEEcCCCCCcccccCCC--CHHHHHHHHHHHH
Q 014216 228 -------------------FNVQGFPTILVFGADKDSPIPYEGAR--TAGAIESFALEQL 266 (428)
Q Consensus 228 -------------------~~v~~~P~i~~~~~~~~~~~~y~g~~--~~~~i~~fi~~~~ 266 (428)
+++...|+++++.+++.....+.|.. +.++|.+.+.+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll 171 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAS 171 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHT
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHH
Confidence 23455788888877776666667765 4788888887654
No 445
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.95 E-value=1.2e-05 Score=69.47 Aligned_cols=88 Identities=8% Similarity=0.143 Sum_probs=67.5
Q ss_pred cCCeEEEEEEC-CCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCCc----------------------------hhHhh
Q 014216 177 SKDLWIVEFFA-PWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDSE----------------------------KSLMS 226 (428)
Q Consensus 177 ~~~~~~v~f~~-~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~~----------------------------~~~~~ 226 (428)
..++++|.||+ .||+.|....+.+.++.+.|.+. +.|+.|+++.. ..+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 35789999996 99999999999999999999764 89998887642 24677
Q ss_pred hcCCC------cCcEEEEEcCCCCCcccccCC----CCHHHHHHHHHH
Q 014216 227 KFNVQ------GFPTILVFGADKDSPIPYEGA----RTAGAIESFALE 264 (428)
Q Consensus 227 ~~~v~------~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~ 264 (428)
.|++. .+|+.+++..++.....+.|. ...+++.+.+..
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 88988 789999997776555555443 235666666543
No 446
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.93 E-value=1.7e-05 Score=65.20 Aligned_cols=43 Identities=14% Similarity=0.146 Sum_probs=35.2
Q ss_pred CCCeEEEEEE-CCCChhhhh-hhHHHHHHHHHhcC-ce-EEEEEcCc
Q 014216 47 ANGVVLVEFY-APWCGHCQA-LTPIWEKAATVLKG-VA-TVAALDAN 89 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~-~~~~~~~~~~~~~~-~v-~~~~vd~~ 89 (428)
++++++|.|| +.||+.|.. ..|.+.++.+++++ .+ .++.|+.+
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d 76 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVN 76 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESS
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4678888886 999999999 99999998888764 47 77777765
No 447
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.92 E-value=5.3e-05 Score=62.44 Aligned_cols=93 Identities=12% Similarity=0.057 Sum_probs=70.9
Q ss_pred hcCCCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCceEEEEEcCcccH---------------hHHHH---cCCccc
Q 014216 45 LNANGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDANEHQ---------------SLAQE---YGIRGF 103 (428)
Q Consensus 45 ~~~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~v~~~~vd~~~~~---------------~l~~~---~~v~~~ 103 (428)
.++.|+.+|+++++||..|..+.... +++.+.++.++.+...|.+... .++.. +++.++
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~ 131 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQF 131 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTC
T ss_pred hhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCC
Confidence 34689999999999999999998644 4566666667777788877543 34443 899999
Q ss_pred cEEEEEeCC----CCCccccCCCCcchHHHHHHHHHHH
Q 014216 104 PTIKVFVPG----KPPVDYQGARDVKPIAEFALQQIKA 137 (428)
Q Consensus 104 P~~~~~~~g----~~~~~~~g~~~~~~l~~~i~~~l~~ 137 (428)
|++.++... +.+.+..|..+++.+...+.+.+..
T Consensus 132 P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e~ 169 (178)
T 2ec4_A 132 PLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAMEI 169 (178)
T ss_dssp SEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 999999432 2367789999999998888777654
No 448
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.91 E-value=3.6e-05 Score=62.81 Aligned_cols=86 Identities=12% Similarity=0.161 Sum_probs=63.5
Q ss_pred CCeEEEEEEC-CCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCC---------------------chhHhhhcCCCc--
Q 014216 178 KDLWIVEFFA-PWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS---------------------EKSLMSKFNVQG-- 232 (428)
Q Consensus 178 ~~~~~v~f~~-~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~---------------------~~~~~~~~~v~~-- 232 (428)
.++++|.||+ .||+.|....+.+.++.+.+++. +.+..|+.+. ...+++.|++..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 114 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEK 114 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcccc
Confidence 4588999998 99999999999999999999764 8888887763 235677788876
Q ss_pred ----------CcEEEEEcCCCCCcccccCCC---CHHHHHHHHH
Q 014216 233 ----------FPTILVFGADKDSPIPYEGAR---TAGAIESFAL 263 (428)
Q Consensus 233 ----------~P~i~~~~~~~~~~~~y~g~~---~~~~i~~fi~ 263 (428)
.|+.+++.+++.....+.+.. ..+++.+.+.
T Consensus 115 ~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~ 158 (163)
T 3gkn_A 115 NMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALK 158 (163)
T ss_dssp EETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHH
T ss_pred ccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHH
Confidence 899999987776555554332 2344544443
No 449
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.91 E-value=3.5e-06 Score=71.20 Aligned_cols=45 Identities=18% Similarity=0.383 Sum_probs=40.7
Q ss_pred CCCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCceEEEEEcCccc
Q 014216 47 ANGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDANEH 91 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~v~~~~vd~~~~ 91 (428)
..+++||.||+.||+||+++.|.| +++.+.+++++.|..++++.+
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 367899999999999999999999 999999988899999998754
No 450
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.90 E-value=2.9e-06 Score=69.57 Aligned_cols=89 Identities=12% Similarity=0.199 Sum_probs=60.3
Q ss_pred cCCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc---------------------cHhHHHHcCCc-
Q 014216 46 NANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE---------------------HQSLAQEYGIR- 101 (428)
Q Consensus 46 ~~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~---------------------~~~l~~~~~v~- 101 (428)
.+++++++.|| +.||++|....|.+.++..++++ .+.++.|+.+. +.++++.||+.
T Consensus 31 ~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~ 110 (164)
T 4gqc_A 31 KRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVYH 110 (164)
T ss_dssp HTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEE
T ss_pred cCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCCcc
Confidence 46788888888 99999999999988888888775 36777776642 23677888874
Q ss_pred ---------cccEEEEEe-CCCCCcccc-----CCCCcchHHHHHHHH
Q 014216 102 ---------GFPTIKVFV-PGKPPVDYQ-----GARDVKPIAEFALQQ 134 (428)
Q Consensus 102 ---------~~P~~~~~~-~g~~~~~~~-----g~~~~~~l~~~i~~~ 134 (428)
..|+++++. +|+....+. +..+.+++.+.+.+.
T Consensus 111 ~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l 158 (164)
T 4gqc_A 111 EDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKI 158 (164)
T ss_dssp EEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHH
T ss_pred cccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 367877774 454333322 223455565555544
No 451
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.88 E-value=3e-05 Score=64.21 Aligned_cols=71 Identities=17% Similarity=0.183 Sum_probs=57.0
Q ss_pred CCeEEEEEECCC-ChhHhhHHHHHHHHHHHhcCCeEEEEEeCCC----------------------chhHhhhcCCCcC-
Q 014216 178 KDLWIVEFFAPW-CGHCKKLAPEWKKAANNLKGKVKLGHVDCDS----------------------EKSLMSKFNVQGF- 233 (428)
Q Consensus 178 ~~~~~v~f~~~~-c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~----------------------~~~~~~~~~v~~~- 233 (428)
.++++|.||+.| |+.|....+.+.++.+. ..+.|+.|+.+. +..+++.|++...
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~ 121 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIAD 121 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBCS
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccc
Confidence 568999999998 99999999999999988 568888887762 2457888888876
Q ss_pred --------cEEEEEcCCCCCccccc
Q 014216 234 --------PTILVFGADKDSPIPYE 250 (428)
Q Consensus 234 --------P~i~~~~~~~~~~~~y~ 250 (428)
|+.+++.+++.....+.
T Consensus 122 ~~~~g~~~p~~~lid~~G~I~~~~~ 146 (175)
T 1xvq_A 122 GPMAGLLARAIVVIGADGNVAYTEL 146 (175)
T ss_dssp STTTTSBCSEEEEECTTSBEEEEEE
T ss_pred cccCCcccceEEEECCCCeEEEEEE
Confidence 89999977665555554
No 452
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.85 E-value=2.7e-05 Score=68.55 Aligned_cols=86 Identities=12% Similarity=0.179 Sum_probs=61.9
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc----------------------------cHhHHH
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~~ 96 (428)
.++++||.|| +.||+.|....+.+.++.+++++ .+.++.|.++. ...+++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 4789999999 99999999999999999999875 47777777652 125777
Q ss_pred HcCCc------cccEEEEEe-CCCCCccccCC----CCcchHHHHHH
Q 014216 97 EYGIR------GFPTIKVFV-PGKPPVDYQGA----RDVKPIAEFAL 132 (428)
Q Consensus 97 ~~~v~------~~P~~~~~~-~g~~~~~~~g~----~~~~~l~~~i~ 132 (428)
.||+. .+|+++++. +|+....+.+. ++.+++.+.|.
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~ 216 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQ 216 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 78885 579988885 55544444442 33445555554
No 453
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.84 E-value=4e-05 Score=57.23 Aligned_cols=73 Identities=11% Similarity=0.095 Sum_probs=47.8
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcc-----cHhHH----HHcCCccccEEEEEeCCCCCccc
Q 014216 48 NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANE-----HQSLA----QEYGIRGFPTIKVFVPGKPPVDY 118 (428)
Q Consensus 48 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~-----~~~l~----~~~~v~~~P~~~~~~~g~~~~~~ 118 (428)
++.-++.|+++||++|+++.+.+.+.. +.+-.+|++. ..++. +..+..++|++++ +|. .+
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~~------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~---~~ 88 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDLG------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDE---KA 88 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHHT------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTT---EE
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcC------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCC---EE
Confidence 445678899999999999999987653 2344445543 12332 3468999999765 341 23
Q ss_pred cCCCCcchHHHHH
Q 014216 119 QGARDVKPIAEFA 131 (428)
Q Consensus 119 ~g~~~~~~l~~~i 131 (428)
-|..+.+.|.++|
T Consensus 89 igg~~~~~l~~~L 101 (103)
T 3nzn_A 89 IVGFKEKEIRESL 101 (103)
T ss_dssp EESCCHHHHHHHT
T ss_pred EEcCCHHHHHHHh
Confidence 4556777766654
No 454
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=97.83 E-value=5.5e-05 Score=64.06 Aligned_cols=71 Identities=15% Similarity=0.191 Sum_probs=53.5
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcc-----------------------cHhHHHHcCCc-
Q 014216 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKGVATVAALDANE-----------------------HQSLAQEYGIR- 101 (428)
Q Consensus 47 ~~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~-----------------------~~~l~~~~~v~- 101 (428)
.+++++|.|| +.||+.|....|.+.++.+++ ..+.++.|.++. +..+++.||+.
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~ygv~~ 155 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFKQAYGVAI 155 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHHHHTTCEE
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHHHHhCcee
Confidence 4789999999 789999999999999999998 557777776642 23566777775
Q ss_pred --------cccEEEEEe-CCCCCccc
Q 014216 102 --------GFPTIKVFV-PGKPPVDY 118 (428)
Q Consensus 102 --------~~P~~~~~~-~g~~~~~~ 118 (428)
..|+.+++. +|+....+
T Consensus 156 ~~~~~~g~~~p~~~lID~~G~I~~~~ 181 (200)
T 3zrd_A 156 TEGPLAGLTARAVVVLDGQDNVIYSE 181 (200)
T ss_dssp CSSTTTTSBCCEEEEECTTSBEEEEE
T ss_pred ecccCCCccccEEEEECCCCeEEEEE
Confidence 369988884 56544333
No 455
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.83 E-value=5.9e-05 Score=63.42 Aligned_cols=42 Identities=21% Similarity=0.362 Sum_probs=36.8
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC 218 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~ 218 (428)
..+++++.|+..||++|..+.+.+.++.+.+.+++.|..+..
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEeh
Confidence 456899999999999999999999999999988877776554
No 456
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.82 E-value=3.7e-05 Score=54.58 Aligned_cols=55 Identities=11% Similarity=0.239 Sum_probs=41.1
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccH----hHHHHcCCccccEEEEEeCCCC
Q 014216 52 LVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQ----SLAQEYGIRGFPTIKVFVPGKP 114 (428)
Q Consensus 52 lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----~l~~~~~v~~~P~~~~~~~g~~ 114 (428)
++.|+++||++|+++.+.+.+. + +.+..+|++.++ ++.+.+++.++|+++ .+|+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~----~--i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~ 61 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK----G--VSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQH 61 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH----T--CCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEE
T ss_pred EEEEECCCChhHHHHHHHHHHC----C--CCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEE
Confidence 6789999999999999888764 1 445566666543 466788999999974 46653
No 457
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.81 E-value=3.1e-05 Score=56.46 Aligned_cols=56 Identities=20% Similarity=0.404 Sum_probs=41.9
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccH----hHHHHcCCccccEEEEEeCCCC
Q 014216 51 VLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQ----SLAQEYGIRGFPTIKVFVPGKP 114 (428)
Q Consensus 51 ~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----~l~~~~~v~~~P~~~~~~~g~~ 114 (428)
.++.|+++||++|+++.+.+.+. .+.|..+|+++++ ++.+.+++.++|++ +.+|+.
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~ 66 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK------GAEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVH 66 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEE
T ss_pred cEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 37789999999999999888764 2556677777654 45557899999975 346653
No 458
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.78 E-value=6.7e-05 Score=63.00 Aligned_cols=40 Identities=15% Similarity=0.419 Sum_probs=32.8
Q ss_pred CCeEEEEEECCCChhhhhhhHHH---HHHHHHhcCceEEEEEc
Q 014216 48 NGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALD 87 (428)
Q Consensus 48 ~~~~lv~f~~~~C~~C~~~~~~~---~~~~~~~~~~v~~~~vd 87 (428)
.++.||.|+..+|++|+++.|.+ .++.+.+.+++.|..++
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~ 63 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYH 63 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEE
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEe
Confidence 47899999999999999999986 68999887655554444
No 459
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.77 E-value=3.2e-05 Score=58.86 Aligned_cols=62 Identities=21% Similarity=0.501 Sum_probs=42.3
Q ss_pred HhhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcc----cH----hHHHHcCCccccEEEEEeCCCC
Q 014216 43 KVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANE----HQ----SLAQEYGIRGFPTIKVFVPGKP 114 (428)
Q Consensus 43 ~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~----~~----~l~~~~~v~~~P~~~~~~~g~~ 114 (428)
.++.+++ ++.|+++||++|+++.+.|.+. + +.+..+|++. .+ .+.+..|..++|++ |.+|+.
T Consensus 14 ~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~----~--i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i--fi~g~~ 83 (113)
T 3rhb_A 14 KTVTENT--VVIYSKTWCSYCTEVKTLFKRL----G--VQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV--FVCGKH 83 (113)
T ss_dssp HHHHHSS--EEEEECTTCHHHHHHHHHHHHT----T--CCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE--EETTEE
T ss_pred HHHhcCC--EEEEECCCChhHHHHHHHHHHc----C--CCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 4444444 7779999999999999988764 2 3344455554 22 25556799999997 446754
No 460
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.76 E-value=9.1e-05 Score=64.72 Aligned_cols=85 Identities=16% Similarity=0.294 Sum_probs=62.0
Q ss_pred CCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC--------------------------------------
Q 014216 178 KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD-------------------------------------- 219 (428)
Q Consensus 178 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~-------------------------------------- 219 (428)
.+.+++.|+.+||++|+.+.+.+.++.+. +++.|..+...
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~ 174 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVP 174 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCcc
Confidence 45689999999999999999999887765 45666544321
Q ss_pred ------------CchhHhhhcCCCcCcEEEEEcCCCCCcccccCCCCHHHHHHHHHHH
Q 014216 220 ------------SEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQ 265 (428)
Q Consensus 220 ------------~~~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (428)
.+..+++++||+++|++++...++ ......|..+.+.|..++...
T Consensus 175 ~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G-~~~~~~G~~~~~~L~~~l~~~ 231 (241)
T 1v58_A 175 ANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKEN-TLQQAVGLPDQKTLNIIMGNK 231 (241)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTT-EEEEEESSCCHHHHHHHTTC-
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC-CEEEecCCCCHHHHHHHHHHH
Confidence 123467889999999999986433 224567888898888877544
No 461
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.75 E-value=0.00019 Score=61.28 Aligned_cols=42 Identities=19% Similarity=0.286 Sum_probs=36.8
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCD 219 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~ 219 (428)
..++++|.|+++||+.|. ..+.+.++.++|.+ .+.+..|+|+
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 467999999999999999 78899999999976 4888888875
No 462
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.75 E-value=5.7e-05 Score=53.47 Aligned_cols=68 Identities=9% Similarity=0.142 Sum_probs=48.9
Q ss_pred EEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhh---hcCCCcCcEEEEEcCCCCCcccccCCCCHHHH
Q 014216 182 IVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMS---KFNVQGFPTILVFGADKDSPIPYEGARTAGAI 258 (428)
Q Consensus 182 ~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~---~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i 258 (428)
++.|+++||++|+...+.+++. .+.|..+|++.++++.+ ++|+.++|+++ . +++ . .+..+.+.|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~-~--~g~-~---~~g~~~~~l 69 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQGFRQLPVVI-A--GDL-S---WSGFRPDMI 69 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCCSSCEEE-E--TTE-E---EESCCHHHH
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhCCCccCEEE-E--CCE-E---EecCCHHHH
Confidence 6789999999999999988863 36777888887665443 58999999983 3 222 1 244566666
Q ss_pred HHHH
Q 014216 259 ESFA 262 (428)
Q Consensus 259 ~~fi 262 (428)
.+++
T Consensus 70 ~~~l 73 (81)
T 1h75_A 70 NRLH 73 (81)
T ss_dssp GGGS
T ss_pred HHHH
Confidence 6554
No 463
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.74 E-value=0.00015 Score=61.12 Aligned_cols=43 Identities=28% Similarity=0.432 Sum_probs=38.6
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD 219 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~ 219 (428)
..+++++.|+..||++|+.+.+.+.++.+.+.+++.|..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 4678999999999999999999999999999888888888764
No 464
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.73 E-value=2.5e-05 Score=58.53 Aligned_cols=54 Identities=20% Similarity=0.304 Sum_probs=40.8
Q ss_pred EEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCc-------hhHhhhcCCCcCcEEE
Q 014216 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSE-------KSLMSKFNVQGFPTIL 237 (428)
Q Consensus 181 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~-------~~~~~~~~v~~~P~i~ 237 (428)
.++.|+++||++|+.+.+.+.+++..+. . |..+|++.+ +.+.+.+|+.++|+++
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~-~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~ 73 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEG-L--LEFVDITATSDTNEIQDYLQQLTGARTVPRVF 73 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTT-S--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEE
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCC-c--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeEE
Confidence 4677999999999999999998755543 2 444555544 3578889999999974
No 465
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=97.72 E-value=0.00013 Score=60.16 Aligned_cols=85 Identities=14% Similarity=0.047 Sum_probs=53.4
Q ss_pred CCCeEEEEE-ECCCChhhh-hhhHHHHHHHHHhcCc-eEEEE-EcCcc-----------------------cHhHHHHcC
Q 014216 47 ANGVVLVEF-YAPWCGHCQ-ALTPIWEKAATVLKGV-ATVAA-LDANE-----------------------HQSLAQEYG 99 (428)
Q Consensus 47 ~~~~~lv~f-~~~~C~~C~-~~~~~~~~~~~~~~~~-v~~~~-vd~~~-----------------------~~~l~~~~~ 99 (428)
++++++|.| |+.||+.|. ...|.+.+++.+++.+ +.++. +..+. +.++++.||
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~~~~~fp~l~D~~~~va~~yG 121 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETD 121 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTTCTTTCEEEECTTCHHHHHHT
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhCCCCceEEEECCChHHHHHhC
Confidence 466555555 599999999 5889999999988753 44443 55542 225677777
Q ss_pred Cc-------------cccEEEEEeCCCCCccccC----CCCcchHHHHH
Q 014216 100 IR-------------GFPTIKVFVPGKPPVDYQG----ARDVKPIAEFA 131 (428)
Q Consensus 100 v~-------------~~P~~~~~~~g~~~~~~~g----~~~~~~l~~~i 131 (428)
+. ..|+.+++.+|+....+.+ .++.+...+.|
T Consensus 122 v~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~~~~g~~~~~~~~vl 170 (173)
T 3mng_A 122 LLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNII 170 (173)
T ss_dssp CBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECTTSSCSSTTSHHHHH
T ss_pred CCcccccccccCCcceEEEEEEEECCEEEEEEEeCCCCCcchHHHHHHH
Confidence 75 3488888875554333322 34445444444
No 466
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.68 E-value=0.00016 Score=58.56 Aligned_cols=74 Identities=11% Similarity=0.169 Sum_probs=54.2
Q ss_pred CeEEEEEE-CCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCC---------------------chhHhhhcCCCcCc--
Q 014216 179 DLWIVEFF-APWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDS---------------------EKSLMSKFNVQGFP-- 234 (428)
Q Consensus 179 ~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~---------------------~~~~~~~~~v~~~P-- 234 (428)
+++++.|| +.||+.|....+.+.++.+.+.++-.+..|+.+. +..+++.||+...|
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~~ 115 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPLS 115 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSSSS
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccccC
Confidence 46788887 8999999999999999999997532666666543 33577888988888
Q ss_pred ----EEEEEcCCCCCcccccCCC
Q 014216 235 ----TILVFGADKDSPIPYEGAR 253 (428)
Q Consensus 235 ----~i~~~~~~~~~~~~y~g~~ 253 (428)
+.+++ +++.....+.|..
T Consensus 116 g~~~~~~li-~~G~i~~~~~g~~ 137 (159)
T 2a4v_A 116 GSIRSHFIF-VDGKLKFKRVKIS 137 (159)
T ss_dssp CBCCEEEEE-ETTEEEEEEESCC
T ss_pred CccceEEEE-cCCEEEEEEccCC
Confidence 66666 5665555555643
No 467
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.68 E-value=0.00039 Score=60.73 Aligned_cols=44 Identities=18% Similarity=0.254 Sum_probs=36.7
Q ss_pred cCCeEEEEEE-CCCChhHh-hHHHHHHHHHHHhcC-Ce-EEEEEeCCC
Q 014216 177 SKDLWIVEFF-APWCGHCK-KLAPEWKKAANNLKG-KV-KLGHVDCDS 220 (428)
Q Consensus 177 ~~~~~~v~f~-~~~c~~c~-~~~~~~~~~a~~~~~-~~-~f~~v~~~~ 220 (428)
..+++++.|| +.||+.|. ...+.+.++++.|++ .+ .+..|+.+.
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~ 79 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVND 79 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCC
Confidence 3568888998 99999999 999999999998865 48 788887654
No 468
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.61 E-value=0.00037 Score=59.20 Aligned_cols=42 Identities=12% Similarity=0.083 Sum_probs=36.2
Q ss_pred cCCeEEEEEECCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCC
Q 014216 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCD 219 (428)
Q Consensus 177 ~~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~ 219 (428)
..++++|.|+++||+.| ...+.+.++.++|.+. +.+..|+++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 35799999999999999 6788999999999764 888888764
No 469
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.60 E-value=0.00026 Score=58.19 Aligned_cols=90 Identities=10% Similarity=0.013 Sum_probs=66.6
Q ss_pred CCeEEEEEECCCCh-hHhhHHHHHHHHHHHhc---CCeEEEEEeCCC---------------------------c----h
Q 014216 178 KDLWIVEFFAPWCG-HCKKLAPEWKKAANNLK---GKVKLGHVDCDS---------------------------E----K 222 (428)
Q Consensus 178 ~~~~~v~f~~~~c~-~c~~~~~~~~~~a~~~~---~~~~f~~v~~~~---------------------------~----~ 222 (428)
.++++|.|++.||+ .|....+.+.++.+.+. ..+.+..|.++. + .
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 67899999999997 69999999999999995 358887777641 0 1
Q ss_pred hHhhhcCC---------CcCcEEEEEcCCCCCcccccCC-CCHHHHHHHHHHHHh
Q 014216 223 SLMSKFNV---------QGFPTILVFGADKDSPIPYEGA-RTAGAIESFALEQLE 267 (428)
Q Consensus 223 ~~~~~~~v---------~~~P~i~~~~~~~~~~~~y~g~-~~~~~i~~fi~~~~~ 267 (428)
.+++.||+ ...|+++++.+++.....|.|. .+.++|...+.+...
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~ 162 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARG 162 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTT
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhc
Confidence 34555443 3457888887776555456664 678999988888754
No 470
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.59 E-value=0.00022 Score=59.61 Aligned_cols=89 Identities=11% Similarity=0.011 Sum_probs=64.7
Q ss_pred CCeEEEEEEC-CCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCCc-------------------------hhHhhhcCC
Q 014216 178 KDLWIVEFFA-PWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSE-------------------------KSLMSKFNV 230 (428)
Q Consensus 178 ~~~~~v~f~~-~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~-------------------------~~~~~~~~v 230 (428)
.++++|.||+ .||+.|....+.+.++.+.|.+ .+.+..|+.+.. ..+++.||+
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv 109 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDN 109 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCC
Confidence 5688999995 9999999999999999988865 588888776542 124455565
Q ss_pred C------cCcEEEEEcCCCCCcccccCCC----CHHHHHHHHHHHH
Q 014216 231 Q------GFPTILVFGADKDSPIPYEGAR----TAGAIESFALEQL 266 (428)
Q Consensus 231 ~------~~P~i~~~~~~~~~~~~y~g~~----~~~~i~~fi~~~~ 266 (428)
. ..|+.+++.+++.....+.|.. +.+++.+.+....
T Consensus 110 ~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 110 MREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp EETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred ccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 5 2599999977765555555543 5778888776553
No 471
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.59 E-value=0.00018 Score=61.81 Aligned_cols=90 Identities=13% Similarity=0.195 Sum_probs=65.8
Q ss_pred cCCeEEEEEE-CCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCCc----------------------------hhHhh
Q 014216 177 SKDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSE----------------------------KSLMS 226 (428)
Q Consensus 177 ~~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~----------------------------~~~~~ 226 (428)
..++++|.|| +.||+.|....+.+.++.+.|.+ .+.+..|+.+.. ..+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 3568999999 99999999999999999998864 577777776542 23555
Q ss_pred hcCC-----CcCcEEEEEcCCCCCcccccCC----CCHHHHHHHHHHHH
Q 014216 227 KFNV-----QGFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQL 266 (428)
Q Consensus 227 ~~~v-----~~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~~ 266 (428)
.|++ ..+|+.+++.+++.....+.|. .+.+++.+.+....
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~ 183 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSII 183 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 6676 3579999997666544444442 46778888776553
No 472
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.58 E-value=0.00013 Score=52.65 Aligned_cols=73 Identities=11% Similarity=0.068 Sum_probs=49.7
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCccc----HhHHHHcCC-----ccccEEEEEeCCCCCccccC
Q 014216 50 VVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEH----QSLAQEYGI-----RGFPTIKVFVPGKPPVDYQG 120 (428)
Q Consensus 50 ~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~----~~l~~~~~v-----~~~P~~~~~~~g~~~~~~~g 120 (428)
..++.|+++||++|+++.+.+.+. +-.+.+..+|.+.+ .++.+.+|. .++|++++ +|+.+.
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~----~i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i~---- 73 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEEN----NIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHIG---- 73 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHT----TCCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEEE----
T ss_pred eEEEEEEcCCChhHHHHHHHHHHc----CCCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEEe----
Confidence 347889999999999999877653 22355666676654 467788888 99999854 665321
Q ss_pred CCCcchHHHHHHHH
Q 014216 121 ARDVKPIAEFALQQ 134 (428)
Q Consensus 121 ~~~~~~l~~~i~~~ 134 (428)
..+.+.+++.+.
T Consensus 74 --g~~~i~~~~~~~ 85 (89)
T 3msz_A 74 --GFTELKANADKI 85 (89)
T ss_dssp --SHHHHHHTHHHH
T ss_pred --ChHHHHHHHHHH
Confidence 344555555543
No 473
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.58 E-value=0.00028 Score=57.99 Aligned_cols=43 Identities=16% Similarity=0.247 Sum_probs=34.5
Q ss_pred CCCeEEEEEECCCCh-hhhhhhHHHHHHHHHhc---CceEEEEEcCc
Q 014216 47 ANGVVLVEFYAPWCG-HCQALTPIWEKAATVLK---GVATVAALDAN 89 (428)
Q Consensus 47 ~~~~~lv~f~~~~C~-~C~~~~~~~~~~~~~~~---~~v~~~~vd~~ 89 (428)
++++++|.||.+||+ .|....+.+.++.+.++ ..+.++.|.+|
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 589999999999997 79999998888877764 24667666654
No 474
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.58 E-value=0.00011 Score=64.09 Aligned_cols=87 Identities=10% Similarity=0.091 Sum_probs=66.4
Q ss_pred eEEEEEECCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCC---------------------------chhHhhhcCCC
Q 014216 180 LWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS---------------------------EKSLMSKFNVQ 231 (428)
Q Consensus 180 ~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~---------------------------~~~~~~~~~v~ 231 (428)
.+++.|+++||+.|....+.+.++++.|.+ .+.+..|+++. +..+++.||+.
T Consensus 36 vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~ 115 (249)
T 3a2v_A 36 FVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL 115 (249)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCC
T ss_pred EEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhCCc
Confidence 455677899999999999999999999976 48888888754 23578888987
Q ss_pred -------cCcEEEEEcCCCCCcccccCC----CCHHHHHHHHHHHH
Q 014216 232 -------GFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQL 266 (428)
Q Consensus 232 -------~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~~ 266 (428)
.+|+++++.+++.....+.|. .+.++|...+....
T Consensus 116 ~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq 161 (249)
T 3a2v_A 116 HAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK 161 (249)
T ss_dssp CTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHH
Confidence 789999997666544444443 36788888776553
No 475
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.57 E-value=0.00032 Score=58.12 Aligned_cols=86 Identities=12% Similarity=0.094 Sum_probs=60.7
Q ss_pred CCeEEEEEE-CCCChhHhhHHHHHHHHHHHhcCC-eEEEEEeCCC---------------------chhHhhhcCCCc--
Q 014216 178 KDLWIVEFF-APWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS---------------------EKSLMSKFNVQG-- 232 (428)
Q Consensus 178 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~---------------------~~~~~~~~~v~~-- 232 (428)
.++++|.|| +.||+.|....+.+.++.+.|++. +.+..|.++. ...+++.|++..
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~ 130 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEK 130 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCcccc
Confidence 457888887 899999999999999999999764 8888887664 234667777753
Q ss_pred ----------CcEEEEEcCCCCCcccccCC---CCHHHHHHHHH
Q 014216 233 ----------FPTILVFGADKDSPIPYEGA---RTAGAIESFAL 263 (428)
Q Consensus 233 ----------~P~i~~~~~~~~~~~~y~g~---~~~~~i~~fi~ 263 (428)
.|+.+++.+++.....+.+. ...+++.+.+.
T Consensus 131 ~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~ 174 (179)
T 3ixr_A 131 TMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLK 174 (179)
T ss_dssp CCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHH
T ss_pred cccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHH
Confidence 48888887666544444332 23345555543
No 476
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.57 E-value=3.7e-05 Score=58.65 Aligned_cols=56 Identities=18% Similarity=0.156 Sum_probs=42.0
Q ss_pred eEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCch-------hHhhhcCCCcCcEEEE
Q 014216 180 LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEK-------SLMSKFNVQGFPTILV 238 (428)
Q Consensus 180 ~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~-------~~~~~~~v~~~P~i~~ 238 (428)
..++.|+++||++|+...+.+.++.... +. |..+|++.++ .+.+.+|+.++|++++
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i 81 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKFSFKR-GA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF 81 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTSCBCT-TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE
T ss_pred CCEEEEEeCCChhHHHHHHHHHHcCCCc-Cc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE
Confidence 4578899999999999999887653221 11 6677776653 6888999999998744
No 477
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=97.54 E-value=7.5e-05 Score=58.21 Aligned_cols=58 Identities=17% Similarity=0.426 Sum_probs=40.6
Q ss_pred EEEEECCCChhhhhh-hHHHHHHHHHhcCceEEEEEcCccc-------HhHHHHcCCccccEEEEEeCCCC
Q 014216 52 LVEFYAPWCGHCQAL-TPIWEKAATVLKGVATVAALDANEH-------QSLAQEYGIRGFPTIKVFVPGKP 114 (428)
Q Consensus 52 lv~f~~~~C~~C~~~-~~~~~~~~~~~~~~v~~~~vd~~~~-------~~l~~~~~v~~~P~~~~~~~g~~ 114 (428)
++.|+++||++|+++ .+.+.+.... .+.+..+|++.. ..+.+.+|..++|++ |.+|+.
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~~~~---~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v--fi~g~~ 104 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQELNVP---KSKALVLELDEMSNGSEIQDALEEISGQKTVPNV--YINGKH 104 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTSCCC---GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEE
T ss_pred EEEEECCCCCchHHHHHHHHHhcCcc---CCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--EECCEE
Confidence 678999999999999 8777654311 133444555433 368888999999996 456654
No 478
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.54 E-value=0.00013 Score=57.07 Aligned_cols=51 Identities=22% Similarity=0.305 Sum_probs=39.0
Q ss_pred EEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCc---h----hHhhhcCCCcCcEEEE
Q 014216 182 IVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSE---K----SLMSKFNVQGFPTILV 238 (428)
Q Consensus 182 ~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~---~----~~~~~~~v~~~P~i~~ 238 (428)
++.|+++||++|+.+.+.+.++. +.|..++++.. + .+.+.+++..+|++++
T Consensus 29 vvvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~i 86 (130)
T 2cq9_A 29 VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFV 86 (130)
T ss_dssp EEEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEEE
T ss_pred EEEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEEE
Confidence 45599999999999999998763 34555666554 3 3778899999999843
No 479
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.53 E-value=0.00019 Score=54.07 Aligned_cols=66 Identities=18% Similarity=0.331 Sum_probs=46.1
Q ss_pred cchHHHhhcCCCeEEEEEEC-----CCChhhhhhhHHHHHHHHHhcCceEEEEEcCcccHh----HHHHcCCccccEEEE
Q 014216 38 NNFKSKVLNANGVVLVEFYA-----PWCGHCQALTPIWEKAATVLKGVATVAALDANEHQS----LAQEYGIRGFPTIKV 108 (428)
Q Consensus 38 ~~~~~~~~~~~~~~lv~f~~-----~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~----l~~~~~v~~~P~~~~ 108 (428)
+.+. .++.+++ ++.|+. +||++|+++.+.|.+. .+.+..+|+++++. +.+..|..++|++
T Consensus 6 ~~~~-~~i~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i-- 74 (109)
T 1wik_A 6 SGLK-VLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKTFSNWPTYPQL-- 74 (109)
T ss_dssp CCHH-HHHTTSS--EEEEESSTTTCCCSSTHHHHHHHHHHT------CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE--
T ss_pred HHHH-HHhccCC--EEEEEecCCCCCCCchHHHHHHHHHHc------CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE--
Confidence 3455 3444444 445777 9999999999988664 35688888887764 4556788999985
Q ss_pred EeCCCC
Q 014216 109 FVPGKP 114 (428)
Q Consensus 109 ~~~g~~ 114 (428)
|.+|+.
T Consensus 75 fi~g~~ 80 (109)
T 1wik_A 75 YVRGDL 80 (109)
T ss_dssp ECSSSE
T ss_pred EECCEE
Confidence 457754
No 480
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.51 E-value=0.0003 Score=60.06 Aligned_cols=89 Identities=7% Similarity=0.100 Sum_probs=65.3
Q ss_pred CCeEEEEEE-CCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCCc----------------------------hhHhhh
Q 014216 178 KDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSE----------------------------KSLMSK 227 (428)
Q Consensus 178 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~----------------------------~~~~~~ 227 (428)
.++++|.|| +.||+.|....+.+.++.+.|++ .+.+..|+++.. ..+++.
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 127 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKD 127 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHHH
Confidence 568999999 99999999999999999999965 588888776542 234556
Q ss_pred cCCC------cCcEEEEEcCCCCCcccccCC----CCHHHHHHHHHHHH
Q 014216 228 FNVQ------GFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQL 266 (428)
Q Consensus 228 ~~v~------~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~~ 266 (428)
|++. .+|+.+++.+++.....+.|. .+.+++.+.+....
T Consensus 128 ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 176 (211)
T 2pn8_A 128 YGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQ 176 (211)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 6763 479999997766544444443 35678877776543
No 481
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.51 E-value=0.00041 Score=59.77 Aligned_cols=85 Identities=16% Similarity=0.124 Sum_probs=59.3
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc-------------------------------cHhHHHH
Q 014216 50 VVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE-------------------------------HQSLAQE 97 (428)
Q Consensus 50 ~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~-------------------------------~~~l~~~ 97 (428)
.+|+.|++.||+.|....+.+.+++.+++. .+.++.|.++. +.++++.
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ 113 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAIL 113 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHHH
Confidence 566666899999999999999999999875 47777776652 1246677
Q ss_pred cCCc------------cccEEEEEe-CCCCCccccC----CCCcchHHHHHHHH
Q 014216 98 YGIR------------GFPTIKVFV-PGKPPVDYQG----ARDVKPIAEFALQQ 134 (428)
Q Consensus 98 ~~v~------------~~P~~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~ 134 (428)
||+. .+|+++++. +|+....+.| .++.+++.+.|...
T Consensus 114 ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l 167 (224)
T 1prx_A 114 LGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISL 167 (224)
T ss_dssp TTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHH
T ss_pred hCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 7773 379998885 4554444433 24566777766654
No 482
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.50 E-value=7.8e-05 Score=61.40 Aligned_cols=58 Identities=16% Similarity=0.298 Sum_probs=44.3
Q ss_pred CCeEEEEEECCCChhhhhh-hHHHHHHHHHhcC-ceE-EEEEcCcc---cHhHHHHcCCc-cccE
Q 014216 48 NGVVLVEFYAPWCGHCQAL-TPIWEKAATVLKG-VAT-VAALDANE---HQSLAQEYGIR-GFPT 105 (428)
Q Consensus 48 ~~~~lv~f~~~~C~~C~~~-~~~~~~~~~~~~~-~v~-~~~vd~~~---~~~l~~~~~v~-~~P~ 105 (428)
++++|+.||+.||++|... .|.+.++..++++ .+. ++.|+.+. ...+++++++. .+|.
T Consensus 44 k~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp~ 108 (171)
T 2pwj_A 44 KKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDAIEF 108 (171)
T ss_dssp SEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTTSEE
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCceEE
Confidence 3577888999999999998 9999999888864 466 77777763 34567777773 5663
No 483
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.47 E-value=0.00061 Score=49.29 Aligned_cols=74 Identities=15% Similarity=0.359 Sum_probs=53.1
Q ss_pred EEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhc-----CCCcCcEEEEEcCCCCCcccccCCCCH
Q 014216 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKF-----NVQGFPTILVFGADKDSPIPYEGARTA 255 (428)
Q Consensus 181 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~-----~v~~~P~i~~~~~~~~~~~~y~g~~~~ 255 (428)
.++.|.++|||+|......+++ ..+.|-.+|.+.+++..+.+ |.+++|.|++ . ++... +..+.
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~------~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~--Dg~~l---~~~~~ 72 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTA------NRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-A--DGSTL---TNPSA 72 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHH------TTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-T--TSCEE---ESCCH
T ss_pred cEEEEcCCCCHhHHHHHHHHHh------cCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-e--CCEEE---eCCCH
Confidence 5788999999999999988875 35777888888876544433 6788998766 2 22222 23578
Q ss_pred HHHHHHHHHHH
Q 014216 256 GAIESFALEQL 266 (428)
Q Consensus 256 ~~i~~fi~~~~ 266 (428)
++|..++.+..
T Consensus 73 ~el~~~L~el~ 83 (92)
T 2lqo_A 73 DEVKAKLVKIA 83 (92)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 88888877664
No 484
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=97.46 E-value=0.0015 Score=56.20 Aligned_cols=94 Identities=17% Similarity=0.215 Sum_probs=64.3
Q ss_pred CCeEEEEEECCCChhhhhhhHHH-HHHHHHh--cCceEEEEEcCc-----------------------------------
Q 014216 48 NGVVLVEFYAPWCGHCQALTPIW-EKAATVL--KGVATVAALDAN----------------------------------- 89 (428)
Q Consensus 48 ~~~~lv~f~~~~C~~C~~~~~~~-~~~~~~~--~~~v~~~~vd~~----------------------------------- 89 (428)
.+..|+.|....|++|+++.+.+ .++.+.+ .+++.+...+.-
T Consensus 39 A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p~~~~s~~Aa~aa~aa~~~~~f~~~~~aLF~~q~~~ 118 (226)
T 3f4s_A 39 APILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFPLDYRGLKAAMLSHCYEKQEDYFNFNKAVFNSIDSW 118 (226)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECCCSHHHHHHHHHGGGCCSHHHHHHHHHHHHHTGGGS
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCCCChhHHHHHHHHHHhhChHHHHHHHHHHHHhCHhh
Confidence 45689999999999999999964 6777777 456665433220
Q ss_pred ---------------------------------------ccHhHHHH-cCCccccEEEEEe-CCCCC-----ccccCCCC
Q 014216 90 ---------------------------------------EHQSLAQE-YGIRGFPTIKVFV-PGKPP-----VDYQGARD 123 (428)
Q Consensus 90 ---------------------------------------~~~~l~~~-~~v~~~P~~~~~~-~g~~~-----~~~~g~~~ 123 (428)
.+...+++ +||+++|++++.. +|+.+ ....|..+
T Consensus 119 ~~~~~~~~~~L~~iA~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~~GV~GtPtfvv~~~nG~~~~Ga~~~~~~G~~~ 198 (226)
T 3f4s_A 119 NYYNLSDLTLLQRIAALSNLKQDAFNQCINDKKIMDKIVNDKSLAINKLGITAVPIFFIKLNDDKSYIEHNKVKHGGYKE 198 (226)
T ss_dssp CSSSTTCCHHHHHHHHHTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHCCCSSCEEEEEECCTTCCCCGGGGEEESCCC
T ss_pred cccccCcHHHHHHHHHHcCCCHHHHHHHHhCHHHHHHHHHHHHHHHHHcCCCcCCEEEEEcCCCEEeeCCCCcccccccC
Confidence 00145667 9999999988764 55432 11234444
Q ss_pred cchHHHHHHHHHHHHHHH
Q 014216 124 VKPIAEFALQQIKALLKE 141 (428)
Q Consensus 124 ~~~l~~~i~~~l~~~~~~ 141 (428)
.+.+.+.|.+.+.....+
T Consensus 199 ~e~l~~~I~~~l~~~~~~ 216 (226)
T 3f4s_A 199 LKYFTNVIDKLYGKAIVK 216 (226)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcc
Confidence 999999998887665443
No 485
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=97.45 E-value=0.00015 Score=55.11 Aligned_cols=55 Identities=16% Similarity=0.323 Sum_probs=39.2
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhcCceEEEEEcCcc--c-----HhHHHHcCCccccEEEEEeCCCC
Q 014216 52 LVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANE--H-----QSLAQEYGIRGFPTIKVFVPGKP 114 (428)
Q Consensus 52 lv~f~~~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~--~-----~~l~~~~~v~~~P~~~~~~~g~~ 114 (428)
++.|+++||++|+++.+.|.+. + +.+-.+|++. + ..+.+..|..++|++++ +|+.
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~----~--i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi--~g~~ 80 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSL----G--VECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV--NKVH 80 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT----T--CCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE--TTEE
T ss_pred EEEEEcCCCCcHHHHHHHHHHc----C--CCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE--CCEE
Confidence 4459999999999999988764 2 3345555553 2 23567789999999755 6653
No 486
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.45 E-value=0.00031 Score=51.84 Aligned_cols=55 Identities=15% Similarity=0.234 Sum_probs=41.8
Q ss_pred CCeEEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchhHhhhc-----CCCcCcEEEE
Q 014216 178 KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKF-----NVQGFPTILV 238 (428)
Q Consensus 178 ~~~~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~~~~-----~v~~~P~i~~ 238 (428)
+...++.|+++||++|+.....+.+. .+.|..+|.+.+++..+.+ |..++|++.+
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~------~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~ifi 73 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK------GVEFQEYCIDGDNEAREAMAARANGKRSLPQIFI 73 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH------TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEEEE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC------CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEEE
Confidence 44567889999999999999999875 3566677777776544433 8889998743
No 487
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.45 E-value=0.00034 Score=57.44 Aligned_cols=42 Identities=10% Similarity=0.098 Sum_probs=36.1
Q ss_pred CCeEEEEEE-CCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCC
Q 014216 178 KDLWIVEFF-APWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDS 220 (428)
Q Consensus 178 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~ 220 (428)
.++++|.|| +.||+.|....+.+.++.+.+ ..+.+..|+.+.
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~ 89 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDL 89 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSC
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCC
Confidence 568889998 799999999999999999888 678888887654
No 488
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.44 E-value=0.00026 Score=51.44 Aligned_cols=70 Identities=13% Similarity=0.161 Sum_probs=49.7
Q ss_pred EEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC-----Cc----hhHhhhcCCCcCcEEEEEcCCCCCcccccC
Q 014216 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD-----SE----KSLMSKFNVQGFPTILVFGADKDSPIPYEG 251 (428)
Q Consensus 181 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~-----~~----~~~~~~~~v~~~P~i~~~~~~~~~~~~y~g 251 (428)
.++.|+++||++|+.....+.++. +.+-.++.+ .. +++.+.+++.++|++++ +++ ..|
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~---~g~----~i~ 79 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK---GDK----HVL 79 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE---TTE----EEE
T ss_pred eEEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE---CCE----EEe
Confidence 367789999999999998888763 333344444 22 56677889999999887 332 235
Q ss_pred CCCHHHHHHHHH
Q 014216 252 ARTAGAIESFAL 263 (428)
Q Consensus 252 ~~~~~~i~~fi~ 263 (428)
..+.+.|.+++.
T Consensus 80 G~~~~~l~~~l~ 91 (92)
T 3ic4_A 80 GYNEEKLKELIR 91 (92)
T ss_dssp SCCHHHHHHHHH
T ss_pred CCCHHHHHHHhc
Confidence 568888888763
No 489
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.42 E-value=0.00033 Score=60.64 Aligned_cols=87 Identities=11% Similarity=-0.002 Sum_probs=60.1
Q ss_pred CCeEEEEEE-CCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc-----------------------------cHhHHH
Q 014216 48 NGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE-----------------------------HQSLAQ 96 (428)
Q Consensus 48 ~~~~lv~f~-~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~-----------------------------~~~l~~ 96 (428)
++++++.|| +.||+.|....+.+.++..+++. .+.++.|.+|. ..++++
T Consensus 29 k~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~ 108 (233)
T 2v2g_A 29 NSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAV 108 (233)
T ss_dssp SSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHH
T ss_pred CCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHH
Confidence 448889998 89999999999999999988864 46777666642 124666
Q ss_pred HcCCc------------cccEEEEEe-CCCCCccccCC----CCcchHHHHHHHH
Q 014216 97 EYGIR------------GFPTIKVFV-PGKPPVDYQGA----RDVKPIAEFALQQ 134 (428)
Q Consensus 97 ~~~v~------------~~P~~~~~~-~g~~~~~~~g~----~~~~~l~~~i~~~ 134 (428)
.||+. .+|+++++. +|+....+.|. ++.+++.+.|...
T Consensus 109 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 109 KLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp HTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 77774 578988885 45543333332 3556666666543
No 490
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.41 E-value=0.00016 Score=52.22 Aligned_cols=52 Identities=23% Similarity=0.443 Sum_probs=41.9
Q ss_pred EEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCC--CchhHhhhc-CCCcCcEEEE
Q 014216 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD--SEKSLMSKF-NVQGFPTILV 238 (428)
Q Consensus 181 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~--~~~~~~~~~-~v~~~P~i~~ 238 (428)
.++.|+++||++|+...+.+.+. .+.|..+|.+ ..+++.+.+ ++.++|++++
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~------~i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~~ 61 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK------GVKYTDIDASTSLRQEMVQRANGRNTFPQIFI 61 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH------TCCEEEECSCHHHHHHHHHHHHSSCCSCEEEE
T ss_pred eEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCHHHHHHHHHHhCCCCCcCEEEE
Confidence 47789999999999999988875 2567777776 445788888 9999999853
No 491
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.41 E-value=0.00024 Score=60.99 Aligned_cols=85 Identities=12% Similarity=0.067 Sum_probs=59.1
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhcC-ceEEEEEcCcc----------------------------cHhHHHHcCC
Q 014216 50 VVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQEYGI 100 (428)
Q Consensus 50 ~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~----------------------------~~~l~~~~~v 100 (428)
.+|+.|++.||+.|....+.+.++..+++. .+.++.|.++. +..+++.||+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv 113 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKI 113 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTC
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCC
Confidence 455556899999999999999999998875 47777776652 1256777887
Q ss_pred c------------cccEEEEEe-CCCCCccccC----CCCcchHHHHHHHH
Q 014216 101 R------------GFPTIKVFV-PGKPPVDYQG----ARDVKPIAEFALQQ 134 (428)
Q Consensus 101 ~------------~~P~~~~~~-~g~~~~~~~g----~~~~~~l~~~i~~~ 134 (428)
. .+|+++++. +|+....+.| .++.+++.+.|...
T Consensus 114 ~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 114 MDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp EEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 3 478988885 4544333332 34666777766544
No 492
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.39 E-value=0.00063 Score=59.25 Aligned_cols=89 Identities=7% Similarity=0.132 Sum_probs=65.0
Q ss_pred cCCeEEEEEEC-CCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCCc----------------------------hhHhh
Q 014216 177 SKDLWIVEFFA-PWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSE----------------------------KSLMS 226 (428)
Q Consensus 177 ~~~~~~v~f~~-~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~----------------------------~~~~~ 226 (428)
..++++|.||+ .||+.|....+.+.++.+.|++ .+.+..|+++.. ..+++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 35688999998 9999999999999999999976 488888876642 23566
Q ss_pred hcCCC------cCcEEEEEcCCCCCcccccC----CCCHHHHHHHHHHH
Q 014216 227 KFNVQ------GFPTILVFGADKDSPIPYEG----ARTAGAIESFALEQ 265 (428)
Q Consensus 227 ~~~v~------~~P~i~~~~~~~~~~~~y~g----~~~~~~i~~fi~~~ 265 (428)
.||+. .+|+++++.+++.....+.+ ..+.+++.+.+...
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 67776 57999999766644444333 23567777766543
No 493
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.38 E-value=0.00011 Score=56.32 Aligned_cols=54 Identities=17% Similarity=0.194 Sum_probs=40.8
Q ss_pred EEEEEECCCChhHhhH-HHHHHHHHHHhcCCeEEEEEeCCCch-------hHhhhcCCCcCcEEE
Q 014216 181 WIVEFFAPWCGHCKKL-APEWKKAANNLKGKVKLGHVDCDSEK-------SLMSKFNVQGFPTIL 237 (428)
Q Consensus 181 ~~v~f~~~~c~~c~~~-~~~~~~~a~~~~~~~~f~~v~~~~~~-------~~~~~~~v~~~P~i~ 237 (428)
.++.|+++||++|+.. .+.+.+... ..+.|..+|.+.++ ++.+.+|+.++|++.
T Consensus 26 ~Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~vf 87 (118)
T 3c1r_A 26 EIFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIY 87 (118)
T ss_dssp SEEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEE
T ss_pred cEEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEEE
Confidence 3667999999999998 887766431 23677777776553 578889999999873
No 494
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.37 E-value=0.0013 Score=55.57 Aligned_cols=85 Identities=25% Similarity=0.288 Sum_probs=62.0
Q ss_pred CCeEEEEEECCCChhhhhhhHHH-HHHHHHh--cCceEEEEEcCcc----------------------------------
Q 014216 48 NGVVLVEFYAPWCGHCQALTPIW-EKAATVL--KGVATVAALDANE---------------------------------- 90 (428)
Q Consensus 48 ~~~~lv~f~~~~C~~C~~~~~~~-~~~~~~~--~~~v~~~~vd~~~---------------------------------- 90 (428)
.++.||.|+...|++|+++.+.+ ..+.+.+ .+++.|...+.--
T Consensus 29 a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p~~~~~s~~Aa~aa~a~~~~~~~~f~~~~~aLf~~~ 108 (202)
T 3gha_A 29 APVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFEKQ 108 (202)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECCCSHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHC
T ss_pred CCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecCccchhHHHHHHHHHHHHhhCHHHHHHHHHHHHHhC
Confidence 56789999999999999999886 5566666 3566665444310
Q ss_pred -------------------------------------------cHhHHHHcCCccccEEEEEeCCCCCccccCCCCcchH
Q 014216 91 -------------------------------------------HQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPI 127 (428)
Q Consensus 91 -------------------------------------------~~~l~~~~~v~~~P~~~~~~~g~~~~~~~g~~~~~~l 127 (428)
+...++++||.++|++++ +|+. +.|..+.+.+
T Consensus 109 ~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~gV~gtPtfvv--nG~~---~~G~~~~e~l 183 (202)
T 3gha_A 109 PDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYV--NDKV---IKNFADYDEI 183 (202)
T ss_dssp CSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTHHHHHHHHHHHHHTTCCSSCEEEE--TTEE---CSCTTCHHHH
T ss_pred ccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEE---ecCCCCHHHH
Confidence 014566778999999876 6653 6788899999
Q ss_pred HHHHHHHHHH
Q 014216 128 AEFALQQIKA 137 (428)
Q Consensus 128 ~~~i~~~l~~ 137 (428)
.+.|.+.+..
T Consensus 184 ~~~i~~~~~~ 193 (202)
T 3gha_A 184 KETIEKELKG 193 (202)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888877643
No 495
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.37 E-value=0.00066 Score=55.19 Aligned_cols=43 Identities=12% Similarity=0.131 Sum_probs=36.1
Q ss_pred cCCeEEEEEEC-CCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCC
Q 014216 177 SKDLWIVEFFA-PWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDS 220 (428)
Q Consensus 177 ~~~~~~v~f~~-~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~ 220 (428)
..++++|.||+ .||+.|....+.+.++.+.+ ..+.+..|+.+.
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~ 84 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDL 84 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCC
Confidence 35688999995 99999999999999999888 678888877654
No 496
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.31 E-value=0.00033 Score=55.75 Aligned_cols=50 Identities=20% Similarity=0.289 Sum_probs=38.0
Q ss_pred EEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCc---h----hHhhhcCCCcCcEEE
Q 014216 182 IVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSE---K----SLMSKFNVQGFPTIL 237 (428)
Q Consensus 182 ~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~---~----~~~~~~~v~~~P~i~ 237 (428)
++.|+++||++|+.+.+.+.++. +.|..++++.. + .+.+.+|+.++|+++
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if 107 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF 107 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE
T ss_pred EEEEECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE
Confidence 45599999999999999998763 33445555543 3 378899999999984
No 497
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.31 E-value=0.00014 Score=58.95 Aligned_cols=86 Identities=13% Similarity=0.286 Sum_probs=51.3
Q ss_pred CCeEEEEEE-CCCChhHhhHHHHHHHHHHHhcC-CeEEEEEeCCC---------------------chhHhhhcCCC---
Q 014216 178 KDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS---------------------EKSLMSKFNVQ--- 231 (428)
Q Consensus 178 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~---------------------~~~~~~~~~v~--- 231 (428)
.+++++.|| +.||+.|....+.+.++.+.+.. .+.+..|+.+. +.++++.||+.
T Consensus 30 Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~~ 109 (157)
T 4g2e_A 30 GKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWEF 109 (157)
T ss_dssp TSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEEC
T ss_pred CCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCcccc
Confidence 567888888 89999999999988888888765 47777776554 22456666653
Q ss_pred --------cCcEEEEEcCCCCCcccc-----cCCCCHHHHHHHHH
Q 014216 232 --------GFPTILVFGADKDSPIPY-----EGARTAGAIESFAL 263 (428)
Q Consensus 232 --------~~P~i~~~~~~~~~~~~y-----~g~~~~~~i~~fi~ 263 (428)
..|+++++.+++.....+ .+..+.+++.+.+.
T Consensus 110 ~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~ 154 (157)
T 4g2e_A 110 PALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVK 154 (157)
T ss_dssp TTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHH
T ss_pred ccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHH
Confidence 246777776555332222 23345667666553
No 498
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.18 E-value=0.00078 Score=47.50 Aligned_cols=51 Identities=12% Similarity=0.242 Sum_probs=38.8
Q ss_pred EEEEEECCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCch----hHhhhcCCCcCcEEE
Q 014216 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEK----SLMSKFNVQGFPTIL 237 (428)
Q Consensus 181 ~~v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~----~~~~~~~v~~~P~i~ 237 (428)
.++.|+++||++|+.....+.+. .+.|..+|.+.++ ++.+.+++.++|++.
T Consensus 2 ~i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~ 56 (82)
T 1fov_A 2 NVEIYTKETCPYCHRAKALLSSK------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF 56 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHH------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE
T ss_pred cEEEEECCCChhHHHHHHHHHHC------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE
Confidence 36788999999999999888764 2556666666543 356688999999984
No 499
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.14 E-value=0.00053 Score=51.22 Aligned_cols=50 Identities=18% Similarity=0.342 Sum_probs=38.8
Q ss_pred EEEEEC-----CCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCchh----HhhhcCCCcCcEEE
Q 014216 182 IVEFFA-----PWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKS----LMSKFNVQGFPTIL 237 (428)
Q Consensus 182 ~v~f~~-----~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~----~~~~~~v~~~P~i~ 237 (428)
++.|++ +||++|+...+.+.+.. +.|..+|.+.++. +.+.+|..++|+++
T Consensus 19 vvvf~~g~~~~~~C~~C~~~~~~L~~~~------i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v~ 77 (105)
T 2yan_A 19 VMLFMKGNKQEAKCGFSKQILEILNSTG------VEYETFDILEDEEVRQGLKAYSNWPTYPQLY 77 (105)
T ss_dssp EEEEESBCSSSBCTTHHHHHHHHHHHHT------CCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE
T ss_pred EEEEEecCCCCCCCccHHHHHHHHHHCC------CCeEEEECCCCHHHHHHHHHHHCCCCCCeEE
Confidence 445777 99999999999998762 6677788777655 45567899999884
No 500
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=97.13 E-value=0.00098 Score=54.35 Aligned_cols=65 Identities=14% Similarity=0.191 Sum_probs=46.4
Q ss_pred CCeEEEEEE-CCCChhHhhHHHHHHHHHHHhcCCeEEEEEeCCCc-----------------------hhHhhhcCCCc-
Q 014216 178 KDLWIVEFF-APWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSE-----------------------KSLMSKFNVQG- 232 (428)
Q Consensus 178 ~~~~~v~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~-----------------------~~~~~~~~v~~- 232 (428)
.++++|.|| +.||+.|....+.+.++.+. ..+.+..|+.+.. ..+++.||+..
T Consensus 46 Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~ 123 (166)
T 3p7x_A 46 GKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVME 123 (166)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEET
T ss_pred CCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCccc
Confidence 567888888 78999999999999988776 4567777765542 23455555553
Q ss_pred -----CcEEEEEcCCCC
Q 014216 233 -----FPTILVFGADKD 244 (428)
Q Consensus 233 -----~P~i~~~~~~~~ 244 (428)
.|+.+++.+++.
T Consensus 124 ~~g~~~p~~~liD~~G~ 140 (166)
T 3p7x_A 124 ELRLLARAVFVLDADNK 140 (166)
T ss_dssp TTTEECCEEEEECTTCB
T ss_pred cCCceeeEEEEECCCCe
Confidence 688888765554
Done!